BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029909
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VI8|TLP7_ARATH Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2
SV=1
Length = 379
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 104/158 (65%), Gaps = 13/158 (8%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKETGLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGL 60
M L S LSRRIS SF H+ ET +S+ + A S SW+ +
Sbjct: 1 MPLSRSLLSRRISNSF-RFHQG--ETTTAPESESIPPPSNMAG----------SSSWSAM 47
Query: 61 LPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQ 120
LPELLGEIIRRVE TED WP R++VV CACV K+WREIT D +S SGKITFPSCLK
Sbjct: 48 LPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKL 107
Query: 121 PGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
PGPR+F +QCLI+RNKKTSTFYLYLALTP G+ L
Sbjct: 108 PGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFL 145
>sp|Q5QM27|TLP1_ORYSJ Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1
PE=2 SV=1
Length = 356
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
Query: 57 WAGLLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
WA LLPEL+ E++RRVE + + WP R++VV+CACVC+RWR+ +V+ P SGKITFP
Sbjct: 34 WARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFP 93
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
S LKQPGPREFP QC I+RNKK STFYLYL LT + G+ L
Sbjct: 94 SSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFL 136
>sp|Q68Y48|TLP9_ORYSJ Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9
PE=2 SV=1
Length = 372
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W+ LLPELL EI+RRV+ + WP R++VVACACVC+RWR+ +V+ P G+ITFPS
Sbjct: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
LKQPGPR+ P C IRRNKK STFYLYL+LT L G+ L
Sbjct: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFL 153
>sp|Q94DT9|TLP2_ORYSJ Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2
PE=2 SV=1
Length = 368
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 71/92 (77%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W+ L+P+LL +I+R VE + WP R++VVACA VC+RWR++ +V+ P SGKITFPS
Sbjct: 51 WSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPS 110
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
LKQPGPR+ P QC I+RNKK STF+LYL LT
Sbjct: 111 SLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLT 142
>sp|Q6Z2G9|TLP5_ORYSJ Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5
PE=2 SV=1
Length = 428
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%)
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
G WA L PELL ++I+RVE +E +WP R+ VVACA VC+ WRE+TK++VK+ G+ITF
Sbjct: 66 GRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITF 125
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFL 151
P LKQPGPRE P QC +RR++ TST+ LYL L+P L
Sbjct: 126 PISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSL 162
>sp|Q53PP5|TLP13_ORYSJ Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica
GN=TULP13 PE=2 SV=1
Length = 440
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Query: 54 SGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKIT 113
S WA L PELL +II R+E +E +WP R++VVACA VC+ WRE+ K+IVK+P L GKIT
Sbjct: 50 SSCWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKIT 109
Query: 114 FPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPFLISLGQTL 158
FP L+QPGPR+ QC IRR+K T T+YLYL+L + L+ G+ L
Sbjct: 110 FPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFL 155
>sp|Q69U54|TLP12_ORYSJ Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica
GN=TULP12 PE=2 SV=1
Length = 451
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 95/157 (60%), Gaps = 6/157 (3%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKE---TGL-GAADDSVVSSTTSASMDSGAAAAHSSGS 56
MS R+ + R + SFG + S E +GL G + S S S
Sbjct: 1 MSFRS--IVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSR 58
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W GL PELL ++++R+E E +WP R++VVACA VC+ WREI KDIV+SP + GK+TFP
Sbjct: 59 WVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPV 118
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLIS 153
LKQPGPR+ QC I+R+K T+YLYL L+P ++S
Sbjct: 119 SLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLS 155
>sp|Q9ZP59|TLP1_ARATH Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2
SV=1
Length = 455
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 74/96 (77%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL ++I+R+E +E WP R++VVACA VC+ WR++ K+IV+SP LSGKITFP
Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPV 116
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLI 152
LKQPGPR+ QC I+R+K T++LYL L+P L+
Sbjct: 117 SLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALL 152
>sp|Q8VY21|TLP3_ARATH Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2
SV=1
Length = 406
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 5/122 (4%)
Query: 27 GLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVV 86
G G + V TS +D A WA + PELL +++ R+E +ED+WP R+NVV
Sbjct: 27 GYGRSRSQRVVQDTSVPVD-----AFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVV 81
Query: 87 ACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLA 146
+CA VC+ WREI K+IV+ P LS K+TFP LKQPGPR QC I RN+ T+YLYL
Sbjct: 82 SCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLG 141
Query: 147 LT 148
L
Sbjct: 142 LN 143
>sp|Q10LG8|TLP6_ORYSJ Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6
PE=2 SV=1
Length = 403
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 73/102 (71%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL E++ R+E +E WP R++VVACA VC+ WR ITK+IV+ P SGK+TFP
Sbjct: 52 WAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPI 111
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
LKQPGPR+ +C IRRN+ T T+YLY+ LT L G+ L
Sbjct: 112 SLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFL 153
>sp|Q8H485|TLP11_ORYSJ Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica
GN=TULP11 PE=2 SV=1
Length = 406
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 74/113 (65%)
Query: 46 SGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKS 105
S AA W L PELL E++ RVE +E WP R++VVACA VC+ WR I ++IV++
Sbjct: 44 SAAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRT 103
Query: 106 PFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
P SG +TFP LKQPGPR+ P +C I RN+ T T+YLY+ LT L G+ L
Sbjct: 104 PEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFL 156
>sp|Q75HX5|TLP8_ORYSJ Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8
PE=2 SV=1
Length = 445
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 91/154 (59%), Gaps = 10/154 (6%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKE------TGLGAADDSVVSSTTSASMDSGAAAAHSS 54
MS R+ + R + SFG + S E +GL ST D+ S
Sbjct: 1 MSFRS--IVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESR 58
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
WA L PELL ++IRR+E +E +WP R++VV+CA VCK WRE+ K+IV SP GK+TF
Sbjct: 59 --WASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTF 116
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
P LKQPGPR+ QC I+R+K ST++LYL L+
Sbjct: 117 PLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLS 150
>sp|Q0WPY0|TLP6_ARATH Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2
SV=1
Length = 413
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W L PELL +II+R+E+ + WP R++VVACA VCK WRE+TK++VK P LSG ITFP
Sbjct: 69 WVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPI 128
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFL 151
L+QPGPR+ P QC I+R + T + LYL L+P L
Sbjct: 129 SLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPAL 163
>sp|Q2QXB2|TLP14_ORYSJ Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica
GN=TULP14 PE=2 SV=1
Length = 445
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 54 SGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKIT 113
S WA L PELL ++I R+E +E +WP R+NVVACA VC+ WR++ ++IVK+P GKIT
Sbjct: 56 SSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKIT 115
Query: 114 FPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPFLISLGQTL 158
FP LKQPGPR QC I+R+K T T+ LYL L + L+ G+ L
Sbjct: 116 FPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFL 161
>sp|Q7XSV4|TLP7_ORYSJ Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7
PE=2 SV=1
Length = 462
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKETGLG--AADDSVVSSTTSASMDSGAAAAHSSGSWA 58
MS R+ + R SFG K S E + + S S+ +D A S WA
Sbjct: 1 MSFRS--IVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQS-KWA 57
Query: 59 GLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCL 118
GL PELL ++++R+E + +WP R++VVACA VC WR++ KDIV++P GK+TFP L
Sbjct: 58 GLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSL 117
Query: 119 KQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
KQPGPR+ QC I+R+K T++LYL L+
Sbjct: 118 KQPGPRDGVIQCFIKRDKSKLTYHLYLCLS 147
>sp|Q688Y7|TLP10_ORYSJ Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica
GN=TULP10 PE=2 SV=1
Length = 352
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Query: 60 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCL 118
LLPEL+ E++RRVE + + WP R+++V+CACVC+RWRE +V+ SG+ITFPS L
Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSL 86
Query: 119 KQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
KQPGP++FP QC ++RNKK S FYLYL L + G+ L
Sbjct: 87 KQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFL 126
>sp|Q8GVE5|TLP2_ARATH Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2
SV=1
Length = 394
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 66/93 (70%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL +II RVE +E +WP R VV+CA VCK WR IT +IV+ P GK+TFP
Sbjct: 48 WASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPI 107
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTP 149
LKQPGPR+ P QC I+RN+ T+T+ LY L P
Sbjct: 108 SLKQPGPRDSPIQCFIKRNRATATYILYYGLMP 140
>sp|Q944S3|TLP5_ARATH Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2
SV=1
Length = 429
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 20/156 (12%)
Query: 8 LSRR---ISRSFGEAHKSSKETGLGA-ADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPE 63
SRR + S G H+ SK G+ A +D +V T WA L
Sbjct: 17 FSRRSFDVRVSNGTTHQRSKSHGVEAHIEDLIVIKNTR---------------WANLPAA 61
Query: 64 LLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGP 123
LL +++++++ +E +WP R+ VVACA VCK WR + KDIVKSP SGK+TFP LKQPGP
Sbjct: 62 LLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGP 121
Query: 124 REFPHQCLIRRNKKTSTFYLYLALTP-FLISLGQTL 158
R+ QC I+R+K T++LYL+L+P L+ G+ L
Sbjct: 122 RDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFL 157
>sp|Q8LJA9|TLP3_ORYSJ Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3
PE=2 SV=1
Length = 448
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKET------GLGAADDSVVSSTTSASMDSGAAAAHSS 54
MS R+ + R + FG + S E GL S+ DS A S
Sbjct: 1 MSFRS--IVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESR 58
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
WA L PELL E+IRR+E E +WP R+NVV A VC+ WRE+ K+ V SP GK+TF
Sbjct: 59 --WASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTF 116
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLG 155
P +KQPGPR+ QC I+RN+ ST++LYL L+ + + G
Sbjct: 117 PVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEG 157
>sp|Q9FRH7|TLP10_ARATH Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1
SV=1
Length = 445
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 77/112 (68%)
Query: 41 SASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITK 100
S+S D + + WA L PELL ++I+R+E +E +WP R++VVACA VC+ WR + +
Sbjct: 43 SSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQ 102
Query: 101 DIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLI 152
+IV P + GK+TFP LKQPGPR+ QC I+R+K TF+L+L L+P L+
Sbjct: 103 EIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALL 154
>sp|Q9SQU1|TLP9_ARATH Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1
SV=1
Length = 380
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Query: 44 MDSGAAAAHSSG--SWAGLLPELLGEIIRRVETTED-SWPHRQNVVACACVCKRWREITK 100
+ + A+ A+SS SW+ L ELL EI+ RVET + WP R+NVVACA VC+ WR +TK
Sbjct: 18 VHAAASTANSSDPFSWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTK 77
Query: 101 DIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
+IV P S K+TFP LKQ GPR+ QC I+RN+ T +++LYL LT L G+ L
Sbjct: 78 EIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLTTSLTDNGKFL 135
>sp|O80699|TLP4_ARATH Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3
SV=1
Length = 265
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 62 PELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQP 121
PELL +++ R+E +ED+WP R+NVV+C VCK WR+I K+IV P +S K TFP LKQP
Sbjct: 3 PELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQP 62
Query: 122 GPREFPHQCLIRRNKKTSTFYLYLA 146
GP QC ++RN+ TFYLYL
Sbjct: 63 GPGGSLVQCYVKRNRSNQTFYLYLG 87
>sp|Q6NPQ1|TLP11_ARATH Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2
SV=1
Length = 389
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 57 WAGLLPELLGEIIRRVETTEDS-WPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
W+ + ELL EI+ RVE + WP R++VVACA VC+ WR + + V P +S K+TFP
Sbjct: 39 WSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFP 98
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQTL 158
LKQPGPR+ QC I+RN+ T +++LYL LT L G+ L
Sbjct: 99 ISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFL 141
>sp|Q9FLP7|FB294_ARATH Putative F-box protein At5g55150 OS=Arabidopsis thaliana
GN=At5g55150 PE=4 SV=2
Length = 360
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 25/148 (16%)
Query: 51 AHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVK----SP 106
A S SW+ LPELL + + D ++ CA VC W++ + + SP
Sbjct: 2 ALPSSSWSEFLPELLNTVFHNLNDARD-------ILNCATVCSSWKDSSSAVYYSRTFSP 54
Query: 107 FL-------SGKITFPSCLK--QPGPREFPHQCLIRRNKKTSTFYLYLALTPFLISLGQT 157
FL + +I F + PG F T F L +T + SL
Sbjct: 55 FLFISHLSSNEEIRFSDQFRVLSPGKLGFSGNQQAWVCGSTLGFLLTKPVTKSVTSLPPL 114
Query: 158 LQFTTVGRLTMVQNPQAAGVVDDLQASK 185
+ F V RL Q+ ++ D +A K
Sbjct: 115 ISFEDVQRLL-----QSQAIIPDSEALK 137
>sp|Q8FNG2|ISPT2_COREF Isoprenyl transferase 2 OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=uppS2 PE=3 SV=1
Length = 243
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 20/110 (18%)
Query: 52 HSSG---SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACV--------CKRWREITK 100
H G W G P L +IR +E E+ N+ CV REI +
Sbjct: 98 HEKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTNMTLAMCVNYGGRAEIIDAAREIAR 157
Query: 101 DIVKSPFLSGKI---TFPSCLKQPGPREFPHQCLIRR---NKKTSTFYLY 144
+I TFP L +P + P L R K+TS F L+
Sbjct: 158 QAAAGQLRPEQINEKTFPDFLDEP---DMPDVDLFLRPSGEKRTSNFLLW 204
>sp|Q9ZQ60|FB102_ARATH F-box protein At2g14290 OS=Arabidopsis thaliana GN=At2g14290 PE=2
SV=1
Length = 353
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 19/72 (26%)
Query: 56 SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
+W+ L P+LLG I R+ T+ HR + VC W LS K+T P
Sbjct: 8 TWSELPPDLLGSIFHRLSFTD---FHRAKI-----VCWNWN-----------LSSKLTVP 48
Query: 116 SCLKQPGPREFP 127
++ P FP
Sbjct: 49 KKIRSPWLMLFP 60
>sp|Q8NNC1|ISPT2_CORGL Isoprenyl transferase 2 OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=uppS2 PE=3 SV=1
Length = 243
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 20/110 (18%)
Query: 52 HSSG---SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWR----EITKDIVK 104
H G W G P L +IR +ET E+ + CV R + +DI +
Sbjct: 98 HEKGVRVRWVGRRPRLWRSVIRELETAEELTKDNTTMTLAMCVNYGGRAEIIDAARDIAR 157
Query: 105 -------SPFLSGKITFPSCLKQPGPREFPHQCLIRR---NKKTSTFYLY 144
P + TFP+ L +P + P L R K+TS F L+
Sbjct: 158 LAAEGKLRPEQITEKTFPNFLDEP---DMPDVDLFLRPSGEKRTSNFLLW 204
>sp|Q9M0M7|FB234_ARATH Putative F-box protein At4g17200 OS=Arabidopsis thaliana
GN=At4g17200 PE=4 SV=1
Length = 381
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Query: 58 AGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKD 101
+ L P+L+GEI+ RV T ++++ C CK W ++K+
Sbjct: 5 SDLSPDLVGEILTRVPMT--------SLISVRCTCKMWNALSKE 40
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
Query: 56 SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
+W L PEL I+ R+ T D + Q V CK WR I KD P + KI
Sbjct: 45 NWVDLPPELTTSILLRLSLT-DILDNAQKV------CKEWRRICKD----PSMWRKINTR 93
Query: 116 SCL 118
CL
Sbjct: 94 DCL 96
>sp|Q2RN85|DCUP_RHORT Uroporphyrinogen decarboxylase OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=hemE PE=3 SV=1
Length = 348
Score = 30.0 bits (66), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 23 SKETGLGAADDSVVSSTTS---ASMDSGAAAAHSSGSWAGLLPE 63
S+ A + ++S+TT A +D+GA A +WAG+LPE
Sbjct: 174 SRPDDFAALMEVLISATTDYLIAQIDAGAEAIQIFDTWAGVLPE 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,671,332
Number of Sequences: 539616
Number of extensions: 2340826
Number of successful extensions: 7393
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6815
Number of HSP's gapped (non-prelim): 578
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)