Query 029912
Match_columns 185
No_of_seqs 109 out of 129
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 08:37:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vf1_A 11R-lipoxygenase; LOX, 99.8 6.1E-21 2.1E-25 182.8 12.0 121 20-158 5-131 (698)
2 3v98_A Arachidonate 5-lipoxyge 99.8 3.1E-18 1.1E-22 164.0 13.2 108 25-157 14-124 (691)
3 1lox_A 15-lipoxygenase, 15LOX; 99.7 1.1E-17 3.7E-22 159.5 13.6 96 36-156 2-102 (662)
4 3dy5_A Allene oxide synthase-l 99.7 1.8E-17 6.2E-22 164.7 12.4 107 32-158 371-483 (1066)
5 3fg1_A Allene oxide synthase-l 99.7 1E-16 3.5E-21 153.6 11.4 102 34-158 6-113 (696)
6 2wxu_A Phospholipase C; cytoly 99.7 8.3E-16 2.8E-20 138.6 14.6 107 31-158 252-365 (370)
7 1olp_A Alpha-toxin; zinc phosp 99.6 1.4E-15 4.8E-20 137.1 13.8 107 31-158 252-365 (370)
8 3cwz_B RAB6IP1, RAB6-interacti 99.6 4.9E-15 1.7E-19 133.8 12.8 99 31-158 244-346 (384)
9 1rp1_A Pancreatic lipase relat 97.4 0.00045 1.5E-08 62.5 8.1 107 34-165 338-450 (450)
10 1bu8_A Protein (pancreatic lip 97.4 0.00071 2.4E-08 60.8 9.3 108 34-165 339-452 (452)
11 1hpl_A Lipase; hydrolase(carbo 96.9 0.002 6.7E-08 58.3 7.7 101 34-161 338-445 (449)
12 1gpl_A RP2 lipase; serine este 96.9 0.0023 8E-08 56.7 7.9 102 34-161 321-428 (432)
13 1w52_X Pancreatic lipase relat 96.3 0.0005 1.7E-08 61.8 -0.5 108 34-165 339-452 (452)
14 2iuj_A Lipoxygenase L-5; dioxy 87.5 4.8 0.00016 39.9 11.5 75 101-179 92-177 (853)
15 2d9t_A Tudor domain-containing 21.0 1.7E+02 0.006 19.8 4.9 34 32-70 22-55 (78)
No 1
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}
Probab=99.84 E-value=6.1e-21 Score=182.79 Aligned_cols=121 Identities=21% Similarity=0.327 Sum_probs=94.7
Q ss_pred hcCCCCCCCCCCCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCC
Q 029912 20 AGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQAC 99 (185)
Q Consensus 20 ~~~~~~~p~~~~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErc 99 (185)
.||..+.++......|.|+|+|+||+..+||||++|+|.|.+.+|.++... .|+++.+++||||
T Consensus 5 ~~~~~~~~g~~~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~----------------~L~~~~~~~FeRG 68 (698)
T 3vf1_A 5 TGGQQMGRGSMHHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAF----------------SLDKYFHNDFESG 68 (698)
T ss_dssp --------------CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCE----------------EECCBCSSSSCCC
T ss_pred cccccccCCCCCCCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecce----------------EeCCCCCCccccC
Confidence 455555555555679999999999999999999999999999999944444 3777788999999
Q ss_pred ceeeeeeecCCCCCCcEEEEEEEcCC---CCceeeEEEEEeeeCC-C--CCeEEEEeceecCCCc
Q 029912 100 NVDEFQVTGPCVVSPICYLYLKLGGE---DDWRPGFAQVRVLEGS-H--HSSEYFYFRRYLPRHV 158 (185)
Q Consensus 100 s~D~F~v~GpC~~~~IC~l~L~rdGs---dgW~pe~V~V~~~~g~-~--~~~~~F~v~~wLp~~v 158 (185)
++|+|.++..|+ |++|.|.|.+|++ ++|||++|+|+. .+. | .....|++++||..++
T Consensus 69 s~D~F~v~~~~L-G~L~~IrI~hDnsG~~~~Wfl~~V~V~~-~~t~~~~g~~~~Fpc~rWL~~d~ 131 (698)
T 3vf1_A 69 GTDTYDQSGVDV-GEIAMITLKENGFGLKSDWYIAKVIIEK-IDEATGFSNKYIFPCYRWVIKQL 131 (698)
T ss_dssp CEEEEEEEECCC-SSEEEEEEEECCCSSBCCCEEEEEEEEE-ECTTTCCEEEEEEEEEEECSSEE
T ss_pred CeeEEEEEeccc-CCceEEEEEECCCCCCCCeEEeEEEEEc-CCCCCCCCcEEEEEhhhcccCCc
Confidence 999999999998 8999999999997 999999999985 232 1 4568999999999984
No 2
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B
Probab=99.76 E-value=3.1e-18 Score=164.04 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=89.5
Q ss_pred CCCCCCCCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeee
Q 029912 25 GAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEF 104 (185)
Q Consensus 25 ~~p~~~~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F 104 (185)
|-|.. ...|.|+|+|+||...+|||+++|+|.|.+.+|..-.+. |++ +.||||++|+|
T Consensus 14 ~~~~~--~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~S~~~~-----------------L~~---~~FeRG~~D~F 71 (691)
T 3v98_A 14 LVPRG--SHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGCSEKHL-----------------LDK---GSFERGAVDSY 71 (691)
T ss_dssp -----------CEEEEEEECCSTTCCBCSEEEEEEEESSCBCCCEE-----------------CCS---SCBCTTCEEEE
T ss_pred cccCC--CCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeEE-----------------ecC---CcccCCCeeEE
Confidence 44544 579999999999999999999999999999999865443 665 89999999999
Q ss_pred eeecCCCCCCcEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCC
Q 029912 105 QVTGPCVVSPICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRH 157 (185)
Q Consensus 105 ~v~GpC~~~~IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~ 157 (185)
.++.++..|++|.|.|.+|++ ++|||++|+|+. .. .....|++++||..+
T Consensus 72 ~v~~~~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~--~~-g~~~~Fpc~rWL~~d 124 (691)
T 3v98_A 72 DVTVDEELGEIQLVRIEKRKYGSNDDWYLKYITLKT--PH-GDYIEFPCYRWITGD 124 (691)
T ss_dssp EECCSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEC--TT-SCEEEEEEEEEECSS
T ss_pred EEEeccCCCCceEEEEEECCCCCCCCeEEeEEEEEC--CC-CcEEEEehHHhcCCC
Confidence 999988889999999999997 999999999984 22 567999999999987
No 3
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*
Probab=99.74 E-value=1.1e-17 Score=159.48 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=87.4
Q ss_pred cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912 36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI 115 (185)
Q Consensus 36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I 115 (185)
.|+|+|+||+..+||||++|+|.|.+.+|...... |+ +||||++|+|.+..++..|+|
T Consensus 2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s~~~~-----------------L~-----~FerG~~d~F~v~~~~dlG~l 59 (662)
T 1lox_A 2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELGS-----------------CL-----RPTRNKEEEFKVNVSKYLGSL 59 (662)
T ss_dssp EEEEEEEECCSTTCCCSSEEEEEEEESSCEEEEEE-----------------EE-----CCCTTCEEEEEEECSSCCCSE
T ss_pred eEEEEEEECCCcCCCcCCcEEEEEEECCCCccCee-----------------CC-----CcCCCCccEEEEEecCCCCcc
Confidence 59999999999999999999999999999987764 54 899999999999999989999
Q ss_pred EEEEEEEcCC---CCceeeEEEEEeeeCCC--CCeEEEEeceecCC
Q 029912 116 CYLYLKLGGE---DDWRPGFAQVRVLEGSH--HSSEYFYFRRYLPR 156 (185)
Q Consensus 116 C~l~L~rdGs---dgW~pe~V~V~~~~g~~--~~~~~F~v~~wLp~ 156 (185)
|.|.|+++++ ++|||++|+|+. ++ .....|++++||..
T Consensus 60 ~~I~I~~d~~g~~~~Wfl~~V~V~~---p~~~g~~~~F~Cn~WL~~ 102 (662)
T 1lox_A 60 LFVRLRKKHFLKEDAWFCNWISVQA---LGAAEDKYWFPCYRWVVG 102 (662)
T ss_dssp EEEEEEEECSSSCCCEEEEEEEEEE---SSSCCCCEEEEEEEEECS
T ss_pred eEEEEEeCCCCCCCCcEEeEEEEec---CCCCCcEEEEEeceEecC
Confidence 9999999998 999999999973 43 44588999999987
No 4
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=99.72 E-value=1.8e-17 Score=164.74 Aligned_cols=107 Identities=21% Similarity=0.300 Sum_probs=87.2
Q ss_pred CCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCC
Q 029912 32 KENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCV 111 (185)
Q Consensus 32 ~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~ 111 (185)
...|.|+|+|+||+..+|||+++|+|.|.+.+|..-.+ .|+++.+++||||++|+|.++. +.
T Consensus 371 ~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~S~~~-----------------~L~~~~~~~FeRGs~d~F~v~~-~~ 432 (1066)
T 3dy5_A 371 GQNAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-----------------KLDKWFHNDFEAGSKEQYTVQG-FD 432 (1066)
T ss_dssp --CCEEEEEEEECCSTTCCCCSCCEEEEEESSCBCCCE-----------------EC-------CCTTCEEEEEEEC-SC
T ss_pred cCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeE-----------------EeCCCCcCccccCCcceEEEEE-ec
Confidence 36899999999999999999999999999999985443 3778888999999999999999 55
Q ss_pred CCCcEEEEEEEcCC------CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912 112 VSPICYLYLKLGGE------DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV 158 (185)
Q Consensus 112 ~~~IC~l~L~rdGs------dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v 158 (185)
.|++|.|.|.+|++ ++|||++|+|+. ........|++++||..++
T Consensus 433 LG~L~~IrI~hDnsG~~~~~~~Wfl~~V~V~~--~~tg~~~~Fpc~rWL~~d~ 483 (1066)
T 3dy5_A 433 VGDIQLIELHSDGGGYWSGDPDWFVNRVIIIS--STQDRVYSFPCFRWVIKDM 483 (1066)
T ss_dssp CSSEEEEEEECCCCC--CCCCCEEEEEEEEEE--SSSSSCEEEEEEEEESSEE
T ss_pred CCCceEEEEEECCCCCCCCCCCeEEeEEEEEe--CCCCCEEEEehhhhccCCe
Confidence 59999999999996 599999999984 3345679999999999883
No 5
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A
Probab=99.68 E-value=1e-16 Score=153.61 Aligned_cols=102 Identities=22% Similarity=0.320 Sum_probs=88.5
Q ss_pred CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912 34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS 113 (185)
Q Consensus 34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~ 113 (185)
.-.|.|+|+||+..+|||+++|+|.|.+.+|..-.. .|++ ++||||++|+|.++. +..|
T Consensus 6 ~~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~S~~~-----------------~L~~---~~FeRGs~d~F~v~~-~dLG 64 (696)
T 3fg1_A 6 HAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-----------------KLDK---GSFEAGSKEQYTVQG-FDVG 64 (696)
T ss_dssp EEEEEEEEEECSSTTCCBCSCEEEEEEETTEECCCE-----------------EECS---SCBCTTCEEEEEEEE-ECCS
T ss_pred cceeeEEEEeCCCCCCCCCceeEEEEEECCCceeeE-----------------EeCC---CCcCCCCccEEEEEE-ccCC
Confidence 346999999999999999999999999999985433 3665 899999999999999 5569
Q ss_pred CcEEEEEEEcCC------CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912 114 PICYLYLKLGGE------DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV 158 (185)
Q Consensus 114 ~IC~l~L~rdGs------dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v 158 (185)
++|.|.|.+|++ ++|||++|+|+. ........|++++||..++
T Consensus 65 ~L~~IrI~hDnsg~G~~~~~Wf~~~V~V~~--~~tg~~~~Fpc~rWL~~dl 113 (696)
T 3fg1_A 65 DIQLIELHSDGGGYWSGDPDWFVNRVIIIS--STQDRVYSFPCFRWVIKDM 113 (696)
T ss_dssp SEEEEEEEECCCCTTCSCCCEEEEEEEEEE--TTCSSCEEEEEEEEESSEE
T ss_pred CceEEEEEECCcCCCCCCCCeEeeEEEEEe--CCCCcEEEeEhhhhccCCe
Confidence 999999999986 799999999984 3345669999999999873
No 6
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A
Probab=99.67 E-value=8.3e-16 Score=138.59 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=93.8
Q ss_pred CCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeec--
Q 029912 31 NKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTG-- 108 (185)
Q Consensus 31 ~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~G-- 108 (185)
+...=.|+|+|+||....|||+++|+|.|.+..|...... ||+ +.++||||++|+|.|.-
T Consensus 252 ~~~~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-----------------LD~-~gndFe~G~~d~y~v~~~~ 313 (370)
T 2wxu_A 252 GKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWE-----------------MDN-PGNDFMTGSKDTYTFKLKD 313 (370)
T ss_dssp SCCCCEEEEEEEECCSTTCSCCSEEEEEEEETTCCEEEEE-----------------CCC-SSCTTCTTCEEEEEEECSC
T ss_pred CccceeEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-----------------hhC-cCCCcCCCCeeeEEEecCC
Confidence 4456679999999999999999999999999999987765 777 57999999999999987
Q ss_pred -CCCCCCcEEEEEEEcCC----CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912 109 -PCVVSPICYLYLKLGGE----DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV 158 (185)
Q Consensus 109 -pC~~~~IC~l~L~rdGs----dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v 158 (185)
+...++|-.|.|.+... |+|+|+||+|+. +......||+++||..+-
T Consensus 314 ~~~~lg~l~~v~l~K~~~~~~~D~Wfc~~i~V~~---p~~~~~~FP~y~Wi~g~~ 365 (370)
T 2wxu_A 314 ENLKIDDIQNMWIRKRKYTAFPDAYKPENIKIIA---NGKVVVDKDINEWISGNS 365 (370)
T ss_dssp TTCCGGGEEEEEEEEECSSSSCCCBCEEEEEEEE---TTEEEEEEECCSCBCTTC
T ss_pred CccCcCceEEEEEEccCCCCCCccceeeeEEEEc---CCCcEEEeccceeeeCCe
Confidence 77889999999999877 999999999984 334568899999997654
No 7
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3
Probab=99.65 E-value=1.4e-15 Score=137.09 Aligned_cols=107 Identities=15% Similarity=0.207 Sum_probs=94.3
Q ss_pred CCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeec--
Q 029912 31 NKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTG-- 108 (185)
Q Consensus 31 ~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~G-- 108 (185)
+...=.|+|+|+||....|||++.|+|.|.+..|..-... ||+ +.++||||++|+|.|.-
T Consensus 252 ~~~~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-----------------LD~-~gndFe~G~~d~y~v~~~~ 313 (370)
T 1olp_A 252 DYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWA-----------------LDN-PGNDFTRNQEGTYTLKLKN 313 (370)
T ss_dssp CCCCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEEE-----------------CCC-SSCCSCTTCEEEEEEECSC
T ss_pred CcccceEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-----------------hhC-cCCccCCCCeeEEEEeccC
Confidence 4456679999999999999999999999999999998775 777 67999999999999987
Q ss_pred -CCCCCCcEEEEEEEcCC----CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912 109 -PCVVSPICYLYLKLGGE----DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV 158 (185)
Q Consensus 109 -pC~~~~IC~l~L~rdGs----dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v 158 (185)
+...++|-.|.|.+... |+|+|++|+|+. +......||+++||..+-
T Consensus 314 ~~~dlg~l~~v~l~K~~~~~~~D~Wfc~~i~V~~---p~~~~~~FP~y~Wi~g~~ 365 (370)
T 1olp_A 314 KNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIA---GDKVRLEKNINEWISGGT 365 (370)
T ss_dssp SSCCGGGEEEEEEEEECSSSSCCEECEEEEEEEE---TTEEEEEEECCSCEETTE
T ss_pred CcCCcCceEEEEEEcCCCCCCCccceeeeEEEEc---CCCcEEEeccceeeeCce
Confidence 77789999999999887 999999999984 335568899999997653
No 8
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}
Probab=99.60 E-value=4.9e-15 Score=133.75 Aligned_cols=99 Identities=11% Similarity=0.105 Sum_probs=84.3
Q ss_pred CCCCccEEEEEEcCCCCC-CCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecC
Q 029912 31 NKENCTYAVTIETTCTKG-AETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGP 109 (185)
Q Consensus 31 ~~~~C~YtV~IkTgc~~~-agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~Gp 109 (185)
....|.|+|+|+||...+ |||+++|+|.|++.+|..-.+. |++. .|+|.+...
T Consensus 244 Ttt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S~~~~-----------------L~~~---------~d~F~v~~~ 297 (384)
T 3cwz_B 244 TTILIPYHILIVPSKKLGGSMFTANPWICISGELGETQILQ-----------------IPRN---------VLEMTFECQ 297 (384)
T ss_dssp TTSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBCCCEE-----------------CCTT---------CCEEEEEEE
T ss_pred cccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCcccEE-----------------eccc---------CceEEEecc
Confidence 356799999999999998 6999999999999999865443 4432 689999999
Q ss_pred CCCCCcEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912 110 CVVSPICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV 158 (185)
Q Consensus 110 C~~~~IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v 158 (185)
|+ |+++.|.|.+|++ ++||+++|+|+. ......+.|++++||..+.
T Consensus 298 ~L-G~L~~I~I~HDnsG~~p~Wfl~~V~V~d--~~tg~~~~Fpc~rWL~~d~ 346 (384)
T 3cwz_B 298 NL-GKLTTVQIGHDNSGLYAKWLVECVMVRN--EVTGHTYKFPCGRWLGKGM 346 (384)
T ss_dssp CC-CSEEEEEEEECCCSSCCCEEEEEEEEEE--TTTCCEEEEEEEEEESTTS
T ss_pred cC-CCceEEEEEECCCCCCCceeEeEEEEEe--CCCCcEEEEECceeCCCCC
Confidence 98 8999999999998 999999999984 3345679999999999664
No 9
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=97.37 E-value=0.00045 Score=62.51 Aligned_cols=107 Identities=10% Similarity=0.071 Sum_probs=81.5
Q ss_pred CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912 34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS 113 (185)
Q Consensus 34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~ 113 (185)
...|.|+|.|+. ++|+..|+|+|.+.+|+.-... |.+ +.||++++++|-+.-+-..+
T Consensus 338 ~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~t~s~li~~~~dlG 394 (450)
T 1rp1_A 338 RWRYGVSITLSG---KRATGQAKVALFGSKGNTHQFN-----------------IFK---GILKPGSTHSNEFDAKLDVG 394 (450)
T ss_dssp CEEEEEEEEEEE---SCEEEEEEEEEEETTEECCCEE-----------------EEE---EEECTTCEEEEEEEESSCCS
T ss_pred cceeEEEEEEcC---CceeEEEEEEEEcCCCCcceEE-----------------ecc---cccCCCCEEEEEEECCCCCC
Confidence 456999999987 7999999999999998753322 211 25999999999986554458
Q ss_pred CcEEEEEEEcC------CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912 114 PICYLYLKLGG------EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC 165 (185)
Q Consensus 114 ~IC~l~L~rdG------sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C 165 (185)
+|-.|.|.... ...|+.+.|+|.. +.+.....|=-++|+-+++--.+.-|
T Consensus 395 ~l~~v~~~W~~~~~~~~~p~~~i~~I~V~~--~e~~~~~~FC~~~~~~~~~~~~~~~~ 450 (450)
T 1rp1_A 395 TIEKVKFLWNNNVVNPTFPKVGAAKITVQK--GEEKTVHSFCSESTVREDVLLTLTPC 450 (450)
T ss_dssp SEEEEEEEEEEC--CTTCCCEEEEEEEEEE--TTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred CceEEEEEEECCCCCCCCCeEEEEEEEEEe--CCCCCeEEecCCCccccCceecccCC
Confidence 99999955443 3799999999974 65666688999999998876555444
No 10
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=97.37 E-value=0.00071 Score=60.81 Aligned_cols=108 Identities=9% Similarity=0.041 Sum_probs=80.7
Q ss_pred CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912 34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS 113 (185)
Q Consensus 34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~ 113 (185)
...|.|+|.|+. .++|+..|+|+|.+.+|+.-... |.+ +.||++++++|-+.-+-..+
T Consensus 339 ~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~dlG 396 (452)
T 1bu8_A 339 RWRYKVSVTLSG--AKKLSGYILVALYGNNGNSKQYE-----------------IFK---GSLKPEARHVRDIDVDINVG 396 (452)
T ss_dssp CEEEEEEEEEEC--SSCEEEEEEEEEEETTEECCCEE-----------------EEE---EEECTTCEEEEEEEESSCCC
T ss_pred ceeeEEEEEEcC--CCceeeEEEEEEEcCCCCcceEE-----------------ecc---cccCCCCEEEEEEeCCCCCC
Confidence 445899999965 57999999999999998753322 211 25999999999986444448
Q ss_pred CcEEEEEEEc-C-----CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912 114 PICYLYLKLG-G-----EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC 165 (185)
Q Consensus 114 ~IC~l~L~rd-G-----sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C 165 (185)
+|-.|.|... + ...|+.+.|+|.. +.+.....|=-+.|+-+|+--.+.-|
T Consensus 397 ~l~~v~~~W~~~~~~~~~p~~~i~~I~V~~--~e~~~~~~FC~~~~~~~~~~~~~~~~ 452 (452)
T 1bu8_A 397 EIQKVKFLWNNKVINLFRPTLGASQITVQS--GVDGKEYNFCSSDTVREDVLQSLYPC 452 (452)
T ss_dssp SEEEEEEEEEC------CCCBEEEEEEEEE--TTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred CceEEEEEEECCCCCCCCCeEEEEEEEEEe--CCCCCeEEecCCCccccCceecccCC
Confidence 9999995444 3 2799999999974 66666788989999988876555444
No 11
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=96.94 E-value=0.002 Score=58.31 Aligned_cols=101 Identities=11% Similarity=-0.000 Sum_probs=72.4
Q ss_pred CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912 34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS 113 (185)
Q Consensus 34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~ 113 (185)
...|.|+|.|+. ++|+..|+|+|.+.+|+.-... |.+ +.||++++++|-+.-+-..+
T Consensus 338 ~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~dlG 394 (449)
T 1hpl_A 338 RWRYRVDVTLSG---KKVTGHVLVSLFGNKGNSRQYE-----------------IFQ---GTLKPDNTYSNEFDSDVEVG 394 (449)
T ss_dssp CEEEEEEEEEEE---CCEEEEEEEEEEETTEECCCEE-----------------EEE---EEECSSCEEEEEEEESSCCC
T ss_pred cceeEEEEEEcC---CceeEEEEEEEEcCCCCceeEE-----------------ecc---cccCCCcEEEEEEeCCCCCC
Confidence 455899999987 7999999999999998753322 211 25999999999986444448
Q ss_pred CcEEEEEEEc-C-----CCCceeeEEEEEeeeCCCCCeEEEEeceecCC-Cccee
Q 029912 114 PICYLYLKLG-G-----EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPR-HVWHG 161 (185)
Q Consensus 114 ~IC~l~L~rd-G-----sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~-~vwyg 161 (185)
+|-.|.|... + ...|+.+.|+|.. .+.....| +++|+-. |+--.
T Consensus 395 ~l~~v~~~W~~~~~~~~~p~~~i~~I~V~~---e~~~~~~f-C~~~~~~~~~~~~ 445 (449)
T 1hpl_A 395 DLEKVKFIWYNNVINLTLPKVGASKITVER---NDGSVFNF-CSEETVREDVLLT 445 (449)
T ss_dssp SEEEEEEEEEECSCCTTCCCEEEEEEEEEC---TTSCEEEE-ECCCCBCTTCCEE
T ss_pred CceEEEEEEECCCCCCCCCeEEEEEEEEEe---CCCCeeee-cCCCccccCeeec
Confidence 9999995444 3 2799999999973 22333556 8887643 44333
No 12
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=96.92 E-value=0.0023 Score=56.74 Aligned_cols=102 Identities=7% Similarity=-0.009 Sum_probs=71.2
Q ss_pred CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912 34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS 113 (185)
Q Consensus 34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~ 113 (185)
...|.|+|.|+. ++|+..|+|+|.+.+|+.-... |.+ +.||++++++|-+.-+-..+
T Consensus 321 ~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~~lG 377 (432)
T 1gpl_A 321 RWRYKVSVTLSG---KKVTGHILVSLFGNKGNSKQYE-----------------IFK---GTLKPDSTHSNEFDSDVDVG 377 (432)
T ss_dssp CEEEEEEEEEEE---CCEEEEEEEEEEESSCEEEEEE-----------------EEE---EEECTTCEEEEEEEESSCCC
T ss_pred cceeEEEEEEcC---CceeEEEEEEEEcCCCCceeEE-----------------ecc---cccCCCcEEEEEEeCCCCCC
Confidence 345899999987 7999999999999999864433 221 25999999999986444348
Q ss_pred CcEEEEEEEc-C-----CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCccee
Q 029912 114 PICYLYLKLG-G-----EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHG 161 (185)
Q Consensus 114 ~IC~l~L~rd-G-----sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg 161 (185)
+|-.|.|... . ...|+.+.|+|.. +.+.. ..|==+..+-+++--.
T Consensus 378 ~l~~v~~~W~~~~~~~~~~~~~i~~I~v~~--~e~~~-~~fC~~~~~~~~~~~~ 428 (432)
T 1gpl_A 378 DLQMVKFIWYNNVINPTLPRVGASKIIVET--NVGKQ-FNFCSPETVREEVLLT 428 (432)
T ss_dssp SEEEEEEEEEESSCCTTCCEEEEEEEEEEC--TTSCE-EEEECSCCEETTCCEE
T ss_pred CceEEEEEEEcCCCCCCCCeEEEEEEEEEe--CCCCC-ceecCCCccccCceec
Confidence 9999995444 3 2789999999973 44443 3333333454554333
No 13
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=96.34 E-value=0.0005 Score=61.77 Aligned_cols=108 Identities=10% Similarity=0.094 Sum_probs=79.5
Q ss_pred CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912 34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS 113 (185)
Q Consensus 34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~ 113 (185)
...|.|+|.|+. .++|+..|+|+|.+.+|+.-... |.+ +.||++++++|-+.-+-..+
T Consensus 339 ~~~Y~v~v~~~~--~~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~dlG 396 (452)
T 1w52_X 339 SWRYRVSITLAG--SGKANGYLKVTLRGSNGNSKQYE-----------------IFK---GSLQPDSSYTLDVDVNFIIG 396 (452)
T ss_dssp CEEEEECCBCCS--SSCCEECBCCCBCCSSCCCCCCC-----------------CCC---EECCSSCCCCEEEEESSCCC
T ss_pred ceeeEEEEEEcC--CcceeeEEEEEEEcCCCCcceEe-----------------ccc---cccCCCCEEEEEEECCCCCC
Confidence 445899999974 57999999999999999864322 322 26999999999986443348
Q ss_pred CcEEEEEEEcC------CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912 114 PICYLYLKLGG------EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC 165 (185)
Q Consensus 114 ~IC~l~L~rdG------sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C 165 (185)
+|-.|.|.... ...|+.+.|+|.. +.+.....|=-++|+-+++--.+.-|
T Consensus 397 ~l~~v~~~W~~~~~~~~~~~~~i~~I~V~~--~e~~~~~~fC~~~~~~~~~~~~~~~~ 452 (452)
T 1w52_X 397 KIQEVKFVWNKTVLNLSKPQLGASRITVQS--GADGTEYKFCGSGTVQDNVEQSLYPC 452 (452)
T ss_dssp CCCCBCCCBCCSSCCSCCCCCCCSBCCCCB--SSSCCCCCEECCSCCCSSCCCCCEEC
T ss_pred CceEEEEEEECCCCCCCCCeEEEEEEEEEe--CCCCCeEEecCCCccccCceecccCC
Confidence 99999855443 2799999999973 55555577888999988765444333
No 14
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}
Probab=87.45 E-value=4.8 Score=39.88 Aligned_cols=75 Identities=11% Similarity=0.088 Sum_probs=52.0
Q ss_pred eeeeee--ecCCCCCCcEEEEEEEcCCCCceeeEEEEEeeeC-CCCCeEEEEeceecCCCc--cee----ecCC--CCCC
Q 029912 101 VDEFQV--TGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEG-SHHSSEYFYFRRYLPRHV--WHG----SDIC--DREV 169 (185)
Q Consensus 101 ~D~F~v--~GpC~~~~IC~l~L~rdGsdgW~pe~V~V~~~~g-~~~~~~~F~v~~wLp~~v--wyg----~n~C--~~~~ 169 (185)
...|+| .-+...|.|=.+.++....+.|||++|+|. + +......|++|+||...- .++ .|.. +++
T Consensus 92 ~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~---~~p~~g~~~F~c~sWv~~~~~~~~~riff~n~~ylp~~- 167 (853)
T 2iuj_A 92 EEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILE---DIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSE- 167 (853)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEEC---CCTTSCCEEEEEEEEECBTTSCSSCEEEECSCCCCGGG-
T ss_pred ceEEEEEeeccccCCCceEEEEEecCCccceEeEEEEe---ecCCCCcEEEEecccccCCCCCCCCeEEEeCCccCccc-
Confidence 346888 456667999999998877899999999995 4 431348899999997522 111 2222 224
Q ss_pred Ccccccccce
Q 029912 170 TPFGIKHKRK 179 (185)
Q Consensus 170 ~~~g~~~~~~ 179 (185)
+|-|+|+-|+
T Consensus 168 tp~~l~~~R~ 177 (853)
T 2iuj_A 168 TPAPLVKYRE 177 (853)
T ss_dssp SCTTTHHHHH
T ss_pred CCHHHHHHHH
Confidence 7888876553
No 15
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=20.97 E-value=1.7e+02 Score=19.81 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=23.1
Q ss_pred CCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEe
Q 029912 32 KENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVK 70 (185)
Q Consensus 32 ~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~ 70 (185)
..+..|-..|.--. ..+..+.|.|.| +||.-.++
T Consensus 22 ~Dg~wYRA~I~~i~----~~~~~~~V~fiD-YGN~e~V~ 55 (78)
T 2d9t_A 22 EDNKFYRAEVEALH----SSGMTAVVKFTD-YGNYEEVL 55 (78)
T ss_dssp TTCCEEEEEEEEEC----SSSSEEEEEETT-TTEEEEEE
T ss_pred CCCCEEEEEEEEEe----CCCCEEEEEEEc-CCCeEEEc
Confidence 45789988887432 124678888866 89977765
Done!