BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029913
         (185 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9XI05|PSB3A_ARATH Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1
           PE=1 SV=2
          Length = 204

 Score =  306 bits (785), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 146/157 (92%), Positives = 152/157 (96%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           CTMDSIGAKELAKDFVV+GTA ESLYGACEAM+KPDM
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDM 157


>sp|O81153|PSB3B_ARATH Proteasome subunit beta type-3-B OS=Arabidopsis thaliana GN=PBC2
           PE=1 SV=1
          Length = 204

 Score =  303 bits (777), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 145/157 (92%), Positives = 151/157 (96%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           CTMDSIGAKELAKDFVV+GTA ESLYGACEAMFKPDM
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDM 157


>sp|O65084|PSB3_PICMA Proteasome subunit beta type-3 OS=Picea mariana GN=PBC1 PE=2 SV=1
          Length = 204

 Score =  298 bits (763), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 141/157 (89%), Positives = 150/157 (95%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI KIHD+L++GLSGLATD 
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQR  FRHKLYQLREER+M+PETFASLVSALLYEKRFGPYFCQPVIAGL ++DKPFI
Sbjct: 61  QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           CTMDSIGAKELAKDFVVAGTA ESLYGACE+M+KPDM
Sbjct: 121 CTMDSIGAKELAKDFVVAGTAAESLYGACESMYKPDM 157


>sp|Q9LST7|PSB3_ORYSJ Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica
           GN=PBC1 PE=2 SV=1
          Length = 204

 Score =  294 bits (752), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 137/157 (87%), Positives = 152/157 (96%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLVFRHKLYQLREERDMKP+TFASLVSALLYEKRFGPYFCQPVIAGL ++++PFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           CTMD IGAKELAKDFVV+GTA ESLYGACE+M+KP+M
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNM 157


>sp|Q55D66|PSB3_DICDI Proteasome subunit beta type-3 OS=Dictyostelium discoideum GN=psmB3
           PE=3 SV=1
          Length = 205

 Score =  200 bits (509), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 91/158 (57%), Positives = 116/158 (73%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  YNG A + MVGKNC AIASD R G+Q QTI+ DF ++ +I+D+ F+G+SGL TD+
Sbjct: 1   MSIMAYNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDA 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
           QTLYQ+LVFRH LY+LREERDM P   ++L++ +LYEKRFGPYF +P+I GL   D  PF
Sbjct: 61  QTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           I  MD IGA     DF+V GT   ++YG CE ++K DM
Sbjct: 121 ISGMDLIGASVATDDFLVVGTMTPAMYGVCETLYKKDM 158


>sp|O73817|PSB3_ONCMY Proteasome subunit beta type-3 OS=Oncorhynchus mykiss GN=psmb3 PE=2
           SV=1
          Length = 205

 Score =  200 bits (508), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 93/158 (58%), Positives = 122/158 (77%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I  + DRL+IGL+GLATD 
Sbjct: 1   MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
           QT+ QRL FR  LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL  +  +PF
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IC++D IG   + +DFVV+GT  E +YG CE++++PDM
Sbjct: 121 ICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDM 158


>sp|P49720|PSB3_HUMAN Proteasome subunit beta type-3 OS=Homo sapiens GN=PSMB3 PE=1 SV=2
          Length = 205

 Score =  198 bits (503), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 120/158 (75%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I  + DRL+IGL+GLATD 
Sbjct: 1   MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
           QT+ QRL FR  LY+L+E R +KP T  S+V+ LLYEKRFGPY+ +PVIAGL  +  KPF
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IC++D IG   +  DFVV+GT  E +YG CE++++P+M
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNM 158


>sp|Q9R1P1|PSB3_MOUSE Proteasome subunit beta type-3 OS=Mus musculus GN=Psmb3 PE=1 SV=1
          Length = 205

 Score =  198 bits (503), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 120/158 (75%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I  + DRL+IGL+GLATD 
Sbjct: 1   MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
           QT+ QRL FR  LY+L+E R +KP T  S+V+ LLYEKRFGPY+ +PVIAGL  +  KPF
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IC++D IG   +  DFVV+GT  E +YG CE++++P+M
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNM 158


>sp|P33672|PSB3_BOVIN Proteasome subunit beta type-3 OS=Bos taurus GN=PSMB3 PE=1 SV=3
          Length = 205

 Score =  197 bits (502), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 120/158 (75%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I  + DRL+IGL+GLATD 
Sbjct: 1   MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
           QT+ QRL FR  LY+L+E R +KP T  S+V+ LLYEKRFGPY+ +PVIAGL  +  KPF
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IC++D IG   +  DFVV+GT  E +YG CE++++P+M
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNM 158


>sp|P40112|PSB3_RAT Proteasome subunit beta type-3 OS=Rattus norvegicus GN=Psmb3 PE=1
           SV=1
          Length = 205

 Score =  197 bits (501), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 91/158 (57%), Positives = 120/158 (75%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MS+  YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I  + DRL+IGL+GLATD 
Sbjct: 1   MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
           QT+ QRL FR  LY+L+E R +KP T  S+V+ LLYEKRFGPY+ +PVIAGL  +  KPF
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IC++D IG   +  DFVV+GT  E +YG CE++++P+M
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNM 158


>sp|Q9Y7T8|PSB3_SCHPO Probable proteasome subunit beta type-3 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=pup3 PE=3 SV=1
          Length = 204

 Score =  195 bits (496), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 122/157 (77%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI EYNG + VAM GKNC AIASD RLGVQ  ++  +F ++  + D+ ++GL+GLATD 
Sbjct: 1   MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLY+   ++  LY+ REER ++P+TFA+LVS+ LYEKRFGPYF  PV+AG+S+++ PFI
Sbjct: 61  QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           C  DSIG  + A+DF+V+GTA E LYG CE++++P++
Sbjct: 121 CGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNL 157


>sp|Q9XYN7|PSB3_DROME Proteasome subunit beta type-3 OS=Drosophila melanogaster
           GN=Prosbeta3 PE=2 SV=1
          Length = 205

 Score =  186 bits (471), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 86/158 (54%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  YNG  +VAM GK+C AIA+D R G+Q QTI+TDF+++  I  R+F+GL+GL TD 
Sbjct: 1   MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDI 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
            T+  RL+FR  LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL  +  +PF
Sbjct: 61  LTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPF 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IC MD IG      DFVVAGT  E LYG CE ++KPD+
Sbjct: 121 ICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDL 158


>sp|Q23237|PSB3_CAEEL Proteasome subunit beta type-3 OS=Caenorhabditis elegans GN=pbs-3
           PE=1 SV=1
          Length = 204

 Score =  171 bits (432), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 109/157 (69%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  Y G  +VAM G  C  IASD R+G Q+ TIATD +++ K+ D++++GL+G  +D+
Sbjct: 1   MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           +T+ ++++FR  LY+LRE R++KP+  + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61  RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           C MD+IG     +DFV  GT  E L G CE  ++ +M
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENM 157


>sp|Q9NDA1|PSB3_TRYBB Proteasome subunit beta type-3 OS=Trypanosoma brucei brucei GN=PSB3
           PE=2 SV=1
          Length = 205

 Score =  159 bits (403), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 111/158 (70%), Gaps = 1/158 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           MSI  Y+G + +AM GK CF + SD RLG QL+TI+ +  ++  I+D + +GL+GL TD 
Sbjct: 1   MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
           QT  Q++ FR ++Y+LREERD+  + FA+LVS++LYE RFGP+F +PVI  +  +  + +
Sbjct: 61  QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120

Query: 120 ICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           +C  D IGA    +D+V AGT  ESL+G CEA+++P +
Sbjct: 121 LCATDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGL 158


>sp|P25451|PSB3_YEAST Proteasome subunit beta type-3 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=PUP3 PE=1 SV=1
          Length = 205

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 107/152 (70%), Gaps = 2/152 (1%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
           NG  +VAM GK+C AIA D RLG Q   ++  F++I   +  +F+G++GLATD  TL + 
Sbjct: 8   NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66

Query: 67  LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
             ++  LY+L+EER ++PETF  LVS+ LYE+RFGPYF  PV+AG+ S   KPFI   D 
Sbjct: 67  FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IG  + AKDF+V+GTA + L+G CE++++P++
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNL 158


>sp|Q9N9W8|PSB3_GIAIN Proteasome subunit beta type-3 OS=Giardia intestinalis GN=PRSBETA3
           PE=2 SV=1
          Length = 207

 Score =  145 bits (367), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 1/157 (0%)

Query: 2   SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDS 60
           +I EYNGSAL+ + G +C A+A+D+RLG   QT+   + +RI ++     +GL+GL TD 
Sbjct: 3   NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
            T Y+++  +  LY L+E+R+++P   A ++S+ LY+ RFGPYF  P+IAG   + KP++
Sbjct: 63  LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
             MD+IG  +   +F +AGTA + L G CE   KPDM
Sbjct: 123 GAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDM 159


>sp|P42742|PSB1_ARATH Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1
           SV=2
          Length = 223

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 66/124 (53%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
           NG   VA+ G +   IA+D R+      ++ D+ +I K+ DR  +  SG   D + L + 
Sbjct: 14  NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKV 73

Query: 67  LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
           L  RH +YQ +  + M     A L+S  LY KRF PY+   V+ GL +E K  + T D++
Sbjct: 74  LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAV 133

Query: 127 GAKE 130
           G+ E
Sbjct: 134 GSYE 137


>sp|Q0W2D6|PSB_UNCMA Proteasome subunit beta OS=Uncultured methanogenic archaeon RC-I
           GN=psmB PE=3 SV=1
          Length = 208

 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 1/157 (0%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           M   +Y G+  + ++      +A++RR  +     + D Q+I +I D   + ++G   D 
Sbjct: 2   MEDKQYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDG 61

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           Q L + L    KL++LR    M     + L+S +L E R+ PY+ Q +I GL D+  P I
Sbjct: 62  QRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGL-DKAGPKI 120

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
            ++D +G +   + FV  G+     YG  E  +KP M
Sbjct: 121 YSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGM 157


>sp|O64464|PSB1_ORYSJ Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica
           GN=PBF1 PE=2 SV=1
          Length = 221

 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 66/128 (51%)

Query: 3   ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
           + E NG   VA+ G +   +A+D RL V    +  D  +I ++ D+  +  SG   D + 
Sbjct: 8   VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKA 67

Query: 63  LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
           L++ L  R  LYQ +  + M     A L+S  LY KRF PY+   V+ GL  E K  + T
Sbjct: 68  LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127

Query: 123 MDSIGAKE 130
            D++G+ E
Sbjct: 128 YDAVGSYE 135


>sp|A3MXQ6|PSB2_PYRCJ Proteasome subunit beta 2 OS=Pyrobaculum calidifontis (strain JCM
           11548 / VA1) GN=psmB2 PE=3 SV=1
          Length = 203

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 2/150 (1%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +  K    +A+++R+     T++T  +++  ++DRL I  +G+  D QTL + L
Sbjct: 8   GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               K Y+L  +R       A L+S +++ +RF P+F + ++ G+ DE  P +  MD +G
Sbjct: 68  KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEG-PHLIVMDPLG 126

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           +  +  ++   GT  +      +A +KPDM
Sbjct: 127 SL-IEDNYAALGTGAKLAIAIIDASYKPDM 155


>sp|O82531|PSB1_PETHY Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1
          Length = 223

 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
           NG   VA+ G +   IA+D R+      +  D+ +I K+ D+  +  SG   D + L + 
Sbjct: 14  NGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKV 73

Query: 67  LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
           L  RH +YQ +  + M       L+S  LY KRF PY+   V+ GL  E K  + T D++
Sbjct: 74  LASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAV 133

Query: 127 GAKE 130
           G+ E
Sbjct: 134 GSYE 137


>sp|Q9UQY2|PSB6_SCHPO Probable proteasome subunit beta type-6 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=pam1 PE=3 SV=1
          Length = 225

 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
           NG   VA+ G     +A D R  V    I T FQ R+ ++ D L IG SG   D+  L +
Sbjct: 12  NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
           R+  R  LY    ER M  ++ A +V  LLY KRF PY+    +AG+  E K  I + D 
Sbjct: 71  RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDP 130

Query: 126 IGAKE 130
           +G+ E
Sbjct: 131 VGSYE 135


>sp|P20618|PSB1_HUMAN Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2
          Length = 241

 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           +NG  ++A+ G++   +ASD RL         D  +  K+ D+  IG SG   D  TL +
Sbjct: 35  FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +  R K+Y+    + M     A+++S +LY +RF PY+   +I GL +E K  + + D 
Sbjct: 95  IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSL 166
           +G+ +  +D   AG       G+  AM +P +   + F ++
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNM 186


>sp|Q2TBX6|PSB1_BOVIN Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1
          Length = 241

 Score = 77.0 bits (188), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           +NG  ++A+ G++   +ASD RL         D  +  K+ D+  IG SG   D  TL +
Sbjct: 35  FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +  R K+Y+    + M     A+++S +LY +RF PY+   +I GL +E K  + + D 
Sbjct: 95  IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSL 166
           +G+ +  +D   AG       G+  AM +P +   + F ++
Sbjct: 155 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNM 186


>sp|O09061|PSB1_MOUSE Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1
          Length = 240

 Score = 76.6 bits (187), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           +NG  ++A+ G++   +ASD RL         D  +  K+ D+  IG SG   D  TL +
Sbjct: 34  FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +  R K+Y+    + M     A+++S +LY +RF PY+   +I GL +E K  + + D 
Sbjct: 94  IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSL 166
           +G+ +  +D   AG       G+  AM +P +   + F ++
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNM 185


>sp|Q9P996|PSB_ARCFU Proteasome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
           49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
           GN=psmB PE=1 SV=1
          Length = 213

 Score = 76.3 bits (186), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 4/160 (2%)

Query: 1   MSITE---YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLA 57
           MS+ E   Y G+  V +V K+   +A+++R  +     +   ++I +I DR+ +  +G  
Sbjct: 1   MSMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSV 60

Query: 58  TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
            D+Q L + +     LY++R ER       A+L S LL   R+ PY  Q +I G+  E K
Sbjct: 61  GDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK 120

Query: 118 PFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
             I ++D IG     KD V  G+   + YG  E  F P++
Sbjct: 121 S-IYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEI 159


>sp|P18421|PSB1_RAT Proteasome subunit beta type-1 OS=Rattus norvegicus GN=Psmb1 PE=1
           SV=3
          Length = 240

 Score = 75.9 bits (185), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           +NG  ++A+ G++   +ASD RL         D  +  K+ D+  IG SG   D  TL +
Sbjct: 34  FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +  R K+Y+    + M     A+++S +LY +RF PY+   +I GL +E K  + + D 
Sbjct: 94  IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDP 153

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSL 166
           +G+ +  +D   AG       G+  AM +P +   + F ++
Sbjct: 154 VGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNM 185


>sp|C9REN7|PSB_METVM Proteasome subunit beta OS=Methanocaldococcus vulcanius (strain
           ATCC 700851 / DSM 12094 / M7) GN=psmB PE=3 SV=1
          Length = 223

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 76/150 (50%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V ++  +   +A+D+R  +       + +++ KI D + + ++G   D+Q + + L
Sbjct: 6   GTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRAL 65

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
           +   +LY++R  +++ P   A+L+S +L+  R  P+  Q +I G    D P + ++D +G
Sbjct: 66  IAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPLG 125

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
                K F   G+     YG  EA +  DM
Sbjct: 126 GMNEEKTFTSTGSGSPIAYGVLEAEYDRDM 155


>sp|Q9IB84|PSB1A_CARAU Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A
           PE=2 SV=1
          Length = 238

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           +NG  ++A+ G++   +ASD RL       + D  +  K+ D   IG SG   D  TL +
Sbjct: 32  FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 91

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +  R K+Y+    + M     A+++S +LY +RF PY+   +I GL +E +  + + D 
Sbjct: 92  IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 151

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSL 166
           +G+ +  +D   AG       G+  AM +P +   I F ++
Sbjct: 152 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNM 183


>sp|Q9IB83|PSB1B_CARAU Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B
           PE=2 SV=1
          Length = 237

 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 9/161 (5%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           +NG  ++A+ G++   +ASD RL       + D  +  K+ D   IG SG   D  TL +
Sbjct: 31  FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +  R K+Y+    + M     A+++S +LY +RF PY+   +I GL +E +  + + D 
Sbjct: 91  IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSL 166
           +G+ +  +D   AG       G+  AM +P +   I F ++
Sbjct: 151 VGSYQ--RDTYKAG-------GSASAMLQPLLDNQIGFKNM 182


>sp|Q8ZST5|PSB2_PYRAE Proteasome subunit beta 2 OS=Pyrobaculum aerophilum (strain ATCC
           51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
           GN=psmB2 PE=3 SV=1
          Length = 203

 Score = 74.7 bits (182), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 81/153 (52%), Gaps = 2/153 (1%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +  K+   +A+++R+     T+++  +++  I D+L I  +G+  D QTL + L
Sbjct: 8   GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               K Y+L  +R     + A L+S +++ +RF P+F + ++ G+ DE+ P +  MD +G
Sbjct: 68  KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGI-DEEGPHLIVMDPLG 126

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMVCN 160
           +  +  ++   GT  +      +  ++PD+   
Sbjct: 127 SL-IEDNYAALGTGAKLAVAVLDTGYRPDITVE 158


>sp|D2RGT4|PSB_ARCPA Proteasome subunit beta OS=Archaeoglobus profundus (strain DSM 5631
           / JCM 9629 / NBRC 100127 / Av18) GN=psmB PE=3 SV=1
          Length = 215

 Score = 73.6 bits (179), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           Y G+  V +V K+   +A+++R  +     +   ++I +I DR+ +  +G   D+Q L +
Sbjct: 10  YKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLAR 69

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +    KLY++R+E     +  A+L+S +L   R+ PYF Q ++ G+ D+  P I ++D 
Sbjct: 70  LISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGV-DKRGPSIYSIDL 128

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCN 160
           +G      D V  G+   + YG  E  + P++  +
Sbjct: 129 LGGAIEEIDIVATGSGSPTAYGVLEDRYTPEITVD 163


>sp|A2SS78|PSB_METLZ Proteasome subunit beta OS=Methanocorpusculum labreanum (strain
           ATCC 43576 / DSM 4855 / Z) GN=psmB PE=3 SV=1
          Length = 212

 Score = 73.2 bits (178), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +V      +A++RR  +     +   +++  I D++ + ++G   D+Q L + +
Sbjct: 11  GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRII 70

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
                LY++R  + +     A+++S  L + RF PY+ Q ++ G+ D   P + ++D+ G
Sbjct: 71  NVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGV-DTSGPSVYSVDAAG 129

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
              L ++FV  G+   + YG  E  FKP+M
Sbjct: 130 GATLEENFVSTGSGSLTAYGVLEDRFKPNM 159


>sp|A7I841|PSB_METB6 Proteasome subunit beta OS=Methanoregula boonei (strain 6A8)
           GN=psmB PE=3 SV=1
          Length = 213

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 1/151 (0%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
            G+  V +V      +A+++R  +     +   +++ +I DR+ + ++G   D+Q L + 
Sbjct: 10  TGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARI 69

Query: 67  LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
           +     LYQ+R  R++     ++L+S  L + R+ PY+ Q ++ G+ D+  P + ++D++
Sbjct: 70  ITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGI-DDHGPSVYSVDAM 128

Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           G     +D V  G+     YG  E  ++P M
Sbjct: 129 GGATKEEDIVSTGSGSPMAYGVLEDRYRPGM 159


>sp|B1YDJ0|PSB2_PYRNV Proteasome subunit beta 2 OS=Pyrobaculum neutrophilum (strain DSM
           2338 / JCM 9278 / V24Sta) GN=psmB2 PE=3 SV=1
          Length = 203

 Score = 71.6 bits (174), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 2/153 (1%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +  K+   +A+++R+     T++T  +++  ++D+L I  +G+  D Q L + L
Sbjct: 8   GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               + Y+L  ++    +  A L+S +++ +RF P++ + ++ G+ DE+ P +  MD +G
Sbjct: 68  KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGV-DEEGPHLIVMDPLG 126

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMVCN 160
           +  +  ++   GT  +      +A ++PDM   
Sbjct: 127 SL-IEDNYAALGTGAKLAVSLLDASYRPDMTVE 158


>sp|A1RX71|PSB2_THEPD Proteasome subunit beta 2 OS=Thermofilum pendens (strain Hrk 5)
           GN=psmB2 PE=3 SV=1
          Length = 204

 Score = 71.2 bits (173), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 2/140 (1%)

Query: 18  NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
           +   +A+++R+   L  ++   +++ +I D++ +  +GL  D QTL + +    +LY+L 
Sbjct: 15  DGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELD 74

Query: 78  EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVV 137
                K  T A L+S +LYE+R  PY+ + V+ GL DE+   + ++D IGA  +  D+V 
Sbjct: 75  SNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGL-DEEGSHLYSLDPIGAI-IEDDYVA 132

Query: 138 AGTAGESLYGACEAMFKPDM 157
            G+  +      E+ +K DM
Sbjct: 133 LGSGTQLAISIVESNYKKDM 152


>sp|P40304|PSB1_DROME Proteasome subunit beta type-1 OS=Drosophila melanogaster GN=Pros26
           PE=2 SV=2
          Length = 235

 Score = 70.5 bits (171), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 1/138 (0%)

Query: 5   EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
           E NG ++VA+ G +   IA+D RL       +    ++ K+  +  +G +G   D+ +L 
Sbjct: 26  ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85

Query: 65  QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
             +  R + Y+    R M  E  A ++S  +Y +RF PY+   ++AG+ +E K  + + D
Sbjct: 86  GSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145

Query: 125 SIGAKELAKDFVVAGTAG 142
            IG  E A  +   GTAG
Sbjct: 146 PIGHCEKAT-YRAGGTAG 162


>sp|Q58634|PSB_METJA Proteasome subunit beta OS=Methanocaldococcus jannaschii (strain
           ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
           GN=psmB PE=1 SV=1
          Length = 224

 Score = 70.5 bits (171), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 75/150 (50%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V ++  +   +A+D+R  +       + +++ KI D + + ++G   D+Q + + L
Sbjct: 6   GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
           +   KLY++R  R++ P   A+L+S +L+  R  P+  Q +I G    +   + ++D +G
Sbjct: 66  IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 125

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
                K F   G+     YG  EA +  DM
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDM 155


>sp|Q8TW10|PSB_METKA Proteasome subunit beta OS=Methanopyrus kandleri (strain AV19 / DSM
           6324 / JCM 9639 / NBRC 100938) GN=psmB PE=3 SV=1
          Length = 210

 Score = 70.1 bits (170), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 4/153 (2%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
            G+  V ++      +A+DRR  +         ++I +IHD + +  +G   D+Q +   
Sbjct: 9   KGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDL 68

Query: 67  LVFRHKLYQLREERDMKPETFASLVSALLYE--KRFGPYFCQPVIAGLSDEDKPFICTMD 124
           +    +LY+LR  R +     A+++S +L+   K F PY  Q ++ G +D+D P +  +D
Sbjct: 69  MRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDD-PALYNLD 127

Query: 125 SIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
             G+  + +D+   G+   + YG  EA ++  M
Sbjct: 128 PSGSI-IEEDYTATGSGSPTAYGVLEAEYEEGM 159


>sp|C7P6N4|PSB_METFA Proteasome subunit beta OS=Methanocaldococcus fervens (strain DSM
           4213 / JCM 157852 / AG86) GN=psmB PE=3 SV=1
          Length = 224

 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 75/150 (50%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V ++  +   +A+D+R  +       + +++ KI D + + ++G   D+Q + + L
Sbjct: 6   GTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLL 65

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               KLY++R  +++ P   A+L+S +L+  R+ P+  Q +I G    +   + ++D +G
Sbjct: 66  TAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPLG 125

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
                K F   G+     YG  EA +  DM
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDRDM 155


>sp|A9A4A1|PSB1_NITMS Proteasome subunit beta 1 OS=Nitrosopumilus maritimus (strain SCM1)
           GN=psmB1 PE=3 SV=1
          Length = 198

 Score = 69.3 bits (168), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 3/150 (2%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +        AS++R+      ++   ++   I  ++    +GL  D Q L  ++
Sbjct: 7   GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               K+ ++  +RD+ P T A ++S ++YE+R+ P   Q ++ G+   DKP + T+D +G
Sbjct: 67  AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 124

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           +  L  ++   GT  E   G  +  FKP+M
Sbjct: 125 S-VLPDEYAAVGTGAEMALGVLDPQFKPNM 153


>sp|D1Z199|PSB_METPS Proteasome subunit beta OS=Methanocella paludicola (strain DSM
           17711 / JCM 13418 / NBRC 101707 / SANAE) GN=psmB PE=3
           SV=1
          Length = 205

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 3/157 (1%)

Query: 1   MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
           M   +Y G+  V ++  N   +A++RR  +     + D Q+I ++ D + + ++G   D 
Sbjct: 1   MDDKQYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDG 60

Query: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           Q L + L    KL++LR    M     + L+S LL+E R   ++ Q ++ G+ D+  P +
Sbjct: 61  QRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRI--FYIQVLVGGV-DKSGPKL 117

Query: 121 CTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
            ++D  G +     F   G+     YG  E  +K DM
Sbjct: 118 FSLDPAGGRITEVKFSSTGSGSPLAYGVLEDRYKQDM 154


>sp|A6USJ3|PSB_METVS Proteasome subunit beta OS=Methanococcus vannielii (strain SB /
           ATCC 35089 / DSM 1224) GN=psmB PE=3 SV=1
          Length = 219

 Score = 68.6 bits (166), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 3/167 (1%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V ++ ++   +A+D+R  +       + +++ KI D + + ++G   D+Q+L + L
Sbjct: 14  GTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLL 73

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               K+Y++R   +M P +  +L S +L+  R  P   Q +I G    + P + ++D +G
Sbjct: 74  SAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSLDPVG 133

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMVCNIRFFSLLLDIRMLF 174
                  F   G+   + YG  EA +K ++  NI    LL+ ++ L 
Sbjct: 134 GINEESSFTATGSGSPTAYGVLEAEYKSEI--NIE-KGLLIAVKALI 177


>sp|A6UT20|PSB_META3 Proteasome subunit beta OS=Methanococcus aeolicus (strain Nankai-3
           / ATCC BAA-1280) GN=psmB PE=3 SV=1
          Length = 217

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 74/153 (48%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +V  +   +A+D+R  +       + +++ KI D + + ++G   D+Q+L + +
Sbjct: 14  GTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRII 73

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
                LY+LR   ++ P + A L+S +L+  R  P+  Q +I G        + ++D++G
Sbjct: 74  SAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSLDAVG 133

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDMVCN 160
                  F   G+   + +G  E  +K DM  N
Sbjct: 134 GLNEETSFTATGSGSPTAFGVLEEEYKKDMTIN 166


>sp|D3RX66|PSB_FERPA Proteasome subunit beta OS=Ferroglobus placidus (strain DSM 10642 /
           AEDII12DO) GN=psmB PE=3 SV=1
          Length = 210

 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 1/152 (0%)

Query: 6   YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
           + G+  V +V K+   +A+++R  +     +   ++I KI DR+ +  +G   D+Q L +
Sbjct: 7   FKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLAR 66

Query: 66  RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
            +     LY +R+E +   +  A+LVS LL   R+ PY  Q +I G+ D+    I ++D 
Sbjct: 67  LIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGV-DKTGAKIYSIDP 125

Query: 126 IGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           IG      D V  G+     YG  E  ++ D+
Sbjct: 126 IGGAIEEIDIVATGSGSPMAYGVLEDNYRKDI 157


>sp|D3S8M7|PSB_METSF Proteasome subunit beta OS=Methanocaldococcus sp. (strain FS406-22)
           GN=psmB PE=3 SV=1
          Length = 224

 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 74/150 (49%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V ++  +   +A+D+R  +       + +++ KI D + + ++G   D+Q + + L
Sbjct: 6   GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
               KLY++R  R++ P   A+L+S +L+  R  P+  Q +I G    +   + ++D +G
Sbjct: 66  TAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLDPLG 125

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
                K F   G+     YG  EA +  +M
Sbjct: 126 GMNEEKTFTATGSGSPIAYGVLEAGYDREM 155


>sp|A0B5B1|PSB_METTP Proteasome subunit beta OS=Methanosaeta thermophila (strain DSM
           6194 / PT) GN=psmB PE=3 SV=1
          Length = 207

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 79/155 (50%), Gaps = 1/155 (0%)

Query: 3   ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
           +  + G+  V +V      +AS+ R  +     +   ++I +I D + +  +G+  D+Q 
Sbjct: 2   VEAFKGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQA 61

Query: 63  LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
           L + +    +LY+++    +  +   SL+S +L  +R+ P+  Q V+ G+ D+  P I +
Sbjct: 62  LVRMIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGV-DKMGPKIFS 120

Query: 123 MDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           +D++G +    D V  G+     YG  E+++KP +
Sbjct: 121 LDALGGQIEEHDIVSTGSGSPIAYGVLESLYKPGL 155


>sp|A1RSJ8|PSB1_PYRIL Proteasome subunit beta 1 OS=Pyrobaculum islandicum (strain DSM
           4184 / JCM 9189) GN=psmB1 PE=3 SV=1
          Length = 203

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 8   GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
           G+  V +  K+   +A+++R+     T+++  +++  I+D+L I  +G+  D QTL + L
Sbjct: 8   GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67

Query: 68  VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
                 Y+L   +       A L+S +++ +R  P++ + ++ G+ DE+ P +  MD +G
Sbjct: 68  KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGV-DEEGPHLIVMDPLG 126

Query: 128 AKELAKDFVVAGTAGESLYGACEAMFKPDM 157
           +  +  ++   GT  +      +A ++PD+
Sbjct: 127 SL-IEDNYAALGTGAKLAVSLLDATYRPDI 155


>sp|B8GG66|PSB_METPE Proteasome subunit beta OS=Methanosphaerula palustris (strain ATCC
           BAA-1556 / DSM 19958 / E1-9c) GN=psmB PE=3 SV=1
          Length = 211

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 1/152 (0%)

Query: 7   NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
            G+  + +V K+   +A+++R  +     +   +++ ++ DR+ +  +G   D+Q L + 
Sbjct: 8   KGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLARI 67

Query: 67  LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
           +     LYQ+R  R +     ++L+S  L + R  PY+ Q ++ G+ D   P + ++D++
Sbjct: 68  MSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGV-DATGPSVYSVDAM 126

Query: 127 GAKELAKDFVVAGTAGESLYGACEAMFKPDMV 158
           G      D V  G+     YG  E  +K D+ 
Sbjct: 127 GGATRESDIVATGSGSPMAYGVLEDRYKKDLT 158


>sp|A6VK02|PSB_METM7 Proteasome subunit beta OS=Methanococcus maripaludis (strain C7 /
           ATCC BAA-1331) GN=psmB PE=3 SV=1
          Length = 219

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 5/165 (3%)

Query: 1   MSITEYN-----GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSG 55
           +S +EY+     G+  V ++ K+   +A+D+R  +       + +++ KI D + + ++G
Sbjct: 2   ISNSEYHKEYMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAG 61

Query: 56  LATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
              D+Q+L + +    K+Y++R   +M P +  +L+S +L+  R  P   Q ++ G    
Sbjct: 62  SVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLI 121

Query: 116 DKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMVCN 160
           +   + ++D +G       F   G+   + YG  EA ++ D+  +
Sbjct: 122 NGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTID 166


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.326    0.140    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,661,086
Number of Sequences: 539616
Number of extensions: 2507051
Number of successful extensions: 6555
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 6358
Number of HSP's gapped (non-prelim): 196
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)