BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029918
(185 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359483335|ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Vitis vinifera]
Length = 264
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/155 (74%), Positives = 135/155 (87%), Gaps = 1/155 (0%)
Query: 13 RENHINEQVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPV 72
R+ E+ E +MAASA DGVAA ALRSV+ RV QAAERS R P +IR+VAVSKTK V
Sbjct: 7 RDGERAEEAEQSSMAASA-MDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSV 65
Query: 73 SVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVE 132
S+IR+VY++GHRCFGENYVQEI+EKA QLP+D+EWHFIGNLQSNKVKPLL GVPNLA+VE
Sbjct: 66 SLIREVYDSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVE 125
Query: 133 SVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+VD+EKIA RL+RMV T+GRKPLKV+VQVNTSGEE
Sbjct: 126 TVDDEKIADRLDRMVATIGRKPLKVMVQVNTSGEE 160
>gi|302144100|emb|CBI23205.3| unnamed protein product [Vitis vinifera]
Length = 311
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/155 (74%), Positives = 135/155 (87%), Gaps = 1/155 (0%)
Query: 13 RENHINEQVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPV 72
R+ E+ E +MAASA DGVAA ALRSV+ RV QAAERS R P +IR+VAVSKTK V
Sbjct: 54 RDGERAEEAEQSSMAASA-MDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSV 112
Query: 73 SVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVE 132
S+IR+VY++GHRCFGENYVQEI+EKA QLP+D+EWHFIGNLQSNKVKPLL GVPNLA+VE
Sbjct: 113 SLIREVYDSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVE 172
Query: 133 SVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+VD+EKIA RL+RMV T+GRKPLKV+VQVNTSGEE
Sbjct: 173 TVDDEKIADRLDRMVATIGRKPLKVMVQVNTSGEE 207
>gi|449479493|ref|XP_004155614.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cucumis sativus]
Length = 246
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/144 (76%), Positives = 128/144 (88%), Gaps = 2/144 (1%)
Query: 26 MAASAATDGV--AATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGH 83
MA+SAA +G A+ AL SV+QRV AAERS R P +IR+VAVSKTKPV VIRQVY+AGH
Sbjct: 1 MASSAAIEGATPASAALNSVLQRVQLAAERSGRVPQQIRVVAVSKTKPVPVIRQVYDAGH 60
Query: 84 RCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL 143
R FGENYVQE+VEKA QLP+D+EWHFIGNLQSNKVKPLL+GVPNLA+VE+VD+EKIA RL
Sbjct: 61 RYFGENYVQELVEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLAVVETVDDEKIANRL 120
Query: 144 NRMVETMGRKPLKVLVQVNTSGEE 167
+RMVE++GRKPLKV +QVNTSGEE
Sbjct: 121 DRMVESIGRKPLKVFIQVNTSGEE 144
>gi|297844046|ref|XP_002889904.1| alanine racemase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335746|gb|EFH66163.1| alanine racemase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 242
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 127/140 (90%), Gaps = 2/140 (1%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
++AA DGVAA LRSV+QRV+QAAE++ R D+IR+VAVSKTKPVS+IRQVY+AGHR FG
Sbjct: 2 SAAAIDGVAA--LRSVVQRVNQAAEKAGRVSDQIRVVAVSKTKPVSLIRQVYDAGHRSFG 59
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI+EK+ QLPDD+EWHFIGNLQSNKVKPLL+GVPNL MVESVD+EKIA L+R+V
Sbjct: 60 ENYVQEIIEKSPQLPDDIEWHFIGNLQSNKVKPLLSGVPNLVMVESVDDEKIANMLDRVV 119
Query: 148 ETMGRKPLKVLVQVNTSGEE 167
+GRKPLKVLVQVNTSGEE
Sbjct: 120 GNIGRKPLKVLVQVNTSGEE 139
>gi|18391333|ref|NP_563897.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|16226282|gb|AAL16123.1|AF428291_1 At1g11930/F12F1_20 [Arabidopsis thaliana]
gi|21436037|gb|AAM51596.1| At1g11930/F12F1_20 [Arabidopsis thaliana]
gi|332190696|gb|AEE28817.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 257
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/149 (73%), Positives = 127/149 (85%), Gaps = 3/149 (2%)
Query: 19 EQVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQV 78
E V TM+A AA DGVAA LRSV QRV+QAAE++ R D+IR+VAVSKTKPVS+IRQV
Sbjct: 9 EHVADSTMSA-AAIDGVAA--LRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQV 65
Query: 79 YEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
Y+AG R FGENYVQEI+EKA QLP+D+EWHFIGNLQSNKVKPLL+GVPNL VESVD+EK
Sbjct: 66 YDAGQRSFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEK 125
Query: 139 IAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
IA L+R+V +GRKPLKV VQVNTSGE+
Sbjct: 126 IANMLDRVVGNIGRKPLKVFVQVNTSGED 154
>gi|30682530|ref|NP_849649.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|3157934|gb|AAC17617.1| Similar to hypothetical protein F09E5.8 gb|U37429 from C. elegans.
ESTs gb|T42019 and gb|N97000 come from this gene
[Arabidopsis thaliana]
gi|332190697|gb|AEE28818.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 255
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/149 (73%), Positives = 127/149 (85%), Gaps = 3/149 (2%)
Query: 19 EQVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQV 78
E V TM+A AA DGVAA LRSV QRV+QAAE++ R D+IR+VAVSKTKPVS+IRQV
Sbjct: 9 EHVADSTMSA-AAIDGVAA--LRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQV 65
Query: 79 YEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
Y+AG R FGENYVQEI+EKA QLP+D+EWHFIGNLQSNKVKPLL+GVPNL VESVD+EK
Sbjct: 66 YDAGQRSFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEK 125
Query: 139 IAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
IA L+R+V +GRKPLKV VQVNTSGE+
Sbjct: 126 IANMLDRVVGNIGRKPLKVFVQVNTSGED 154
>gi|356567318|ref|XP_003551868.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Glycine max]
Length = 244
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 120/142 (84%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
M + +G A TA RSV+ RV QAAERS PDR+R+VAVSKTKPV++I+Q+Y+AGHR
Sbjct: 1 MTSPLVAEGAAVTAFRSVMLRVQQAAERSGSKPDRVRVVAVSKTKPVTLIQQLYDAGHRH 60
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQEI+EKA QLP D+EWHFIG+LQSNKVK LL GVPNLAMVESVDN+KIA L+R
Sbjct: 61 FGENYVQEIIEKAPQLPPDVEWHFIGHLQSNKVKTLLGGVPNLAMVESVDNQKIANNLDR 120
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
MV T+GR PLKVLVQVNTSGEE
Sbjct: 121 MVSTLGRNPLKVLVQVNTSGEE 142
>gi|356527077|ref|XP_003532140.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 2 [Glycine max]
Length = 252
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/142 (71%), Positives = 121/142 (85%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
M + +G A TA RSV+ RVHQAAERS P+R+R+VAVSKTKPV++I+Q+Y+AGHR
Sbjct: 1 MTSPLVAEGAAMTAFRSVMLRVHQAAERSGSKPERVRVVAVSKTKPVTLIQQLYDAGHRY 60
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQEI+EKA QLP D+EWHFIG+LQSNKVK LL GVPNLAMV+SVDN+K+A L+R
Sbjct: 61 FGENYVQEIIEKAPQLPQDVEWHFIGHLQSNKVKTLLGGVPNLAMVQSVDNQKVANHLDR 120
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
MV T+GR PLKVLVQVNTSGEE
Sbjct: 121 MVSTLGRNPLKVLVQVNTSGEE 142
>gi|356527075|ref|XP_003532139.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 1 [Glycine max]
Length = 244
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/142 (71%), Positives = 121/142 (85%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
M + +G A TA RSV+ RVHQAAERS P+R+R+VAVSKTKPV++I+Q+Y+AGHR
Sbjct: 1 MTSPLVAEGAAMTAFRSVMLRVHQAAERSGSKPERVRVVAVSKTKPVTLIQQLYDAGHRY 60
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQEI+EKA QLP D+EWHFIG+LQSNKVK LL GVPNLAMV+SVDN+K+A L+R
Sbjct: 61 FGENYVQEIIEKAPQLPQDVEWHFIGHLQSNKVKTLLGGVPNLAMVQSVDNQKVANHLDR 120
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
MV T+GR PLKVLVQVNTSGEE
Sbjct: 121 MVSTLGRNPLKVLVQVNTSGEE 142
>gi|147861921|emb|CAN80917.1| hypothetical protein VITISV_024616 [Vitis vinifera]
Length = 245
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/139 (76%), Positives = 122/139 (87%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A +G+A TALRS + RV QAAERS R D++R+VAVSKTKPVS+IRQVY+AGHRCFG
Sbjct: 2 AAPAVEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI EKA QLP+D+EWHFIG+LQSNKVKPLLA VPNLAMVE VDNEKIA +L+R+V
Sbjct: 62 ENYVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+ RKPLKVLVQVNTSGE
Sbjct: 122 SGIRRKPLKVLVQVNTSGE 140
>gi|225460901|ref|XP_002278892.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Vitis vinifera]
gi|297737470|emb|CBI26671.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/139 (76%), Positives = 122/139 (87%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A +G+A TALRS + RV QAAERS R D++R+VAVSKTKPVS+IRQVY+AGHRCFG
Sbjct: 2 AAPAMEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI EKA QLP+D+EWHFIG+LQSNKVKPLLA VPNLAMVE VDNEKIA +L+R+V
Sbjct: 62 ENYVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+ RKPLKVLVQVNTSGE
Sbjct: 122 SGIRRKPLKVLVQVNTSGE 140
>gi|255577143|ref|XP_002529455.1| proline synthetase associated protein, putative [Ricinus communis]
gi|223531071|gb|EEF32921.1| proline synthetase associated protein, putative [Ricinus communis]
Length = 245
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/139 (74%), Positives = 121/139 (87%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A +G A TALRSV+ RV QAAER+ R P+ +RIVAVSKTKPVS+IR VY+AGHRCFG
Sbjct: 2 AAPAIEGAAVTALRSVMVRVRQAAERAGRRPESVRIVAVSKTKPVSLIRHVYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQE+V+KA QLP+D+EWHFIG+LQSNKVK LLAGVPNLAMV+ VDNEK+A L+R+V
Sbjct: 62 ENYVQEVVDKAPQLPEDIEWHFIGHLQSNKVKTLLAGVPNLAMVQGVDNEKVANVLDRVV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
T+GR PLKV VQVNTSGE
Sbjct: 122 STLGRNPLKVFVQVNTSGE 140
>gi|224117946|ref|XP_002331519.1| predicted protein [Populus trichocarpa]
gi|222873743|gb|EEF10874.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/135 (76%), Positives = 117/135 (86%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
D VAA ALRSV+QRV QAAE++ R +IR+VAVSKTKPVS+I+QVY+ GHRCFGENY Q
Sbjct: 2 DKVAAAALRSVLQRVSQAAEKAGRGSQQIRVVAVSKTKPVSLIKQVYDVGHRCFGENYAQ 61
Query: 93 EIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
E +EKA QLP+D+EWHFIGNLQSNKVKPLLA VPNL MVESVD+EKIA L+R V +GR
Sbjct: 62 EFIEKAPQLPEDIEWHFIGNLQSNKVKPLLASVPNLDMVESVDDEKIANHLDRAVGNLGR 121
Query: 153 KPLKVLVQVNTSGEE 167
KPLKVLVQVNTSGEE
Sbjct: 122 KPLKVLVQVNTSGEE 136
>gi|255554799|ref|XP_002518437.1| proline synthetase associated protein, putative [Ricinus communis]
gi|223542282|gb|EEF43824.1| proline synthetase associated protein, putative [Ricinus communis]
Length = 270
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/132 (78%), Positives = 117/132 (88%), Gaps = 2/132 (1%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+QRV QAAERS R +IR+VAVSKTKPVS+I QVY+AGHRCFGENYVQE+VEKA
Sbjct: 41 LRSVLQRVQQAAERSGRGAQQIRVVAVSKTKPVSLIHQVYDAGHRCFGENYVQELVEKAP 100
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNKVKPLLA VPNLA+VESVD++KIA L+R V +GRKPLKVLV
Sbjct: 101 QLPEDIEWHFIGNLQSNKVKPLLAAVPNLAVVESVDDQKIANHLDRAVGNLGRKPLKVLV 160
Query: 160 QVNTSGEE--YG 169
QVNTSGEE YG
Sbjct: 161 QVNTSGEESKYG 172
>gi|388521207|gb|AFK48665.1| unknown [Medicago truncatula]
Length = 244
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 127/169 (75%), Gaps = 13/169 (7%)
Query: 29 SAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGE 88
++++ G AA +L++V+ RVH AAERSSR IR+VA SKTK VS++RQVY+AGHRCFGE
Sbjct: 2 TSSSQGGAAASLKAVLDRVHHAAERSSRDVKEIRVVAASKTKSVSMLRQVYDAGHRCFGE 61
Query: 89 NYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
NYVQEI+EKA QLP+D+EWHFIGNLQSNKVKPLLAGVPNLA VESVD+EKIA L+R +
Sbjct: 62 NYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLAGVPNLAYVESVDDEKIANLLDRAIA 121
Query: 149 TMGRKPLKVLVQVNTSGE------EYGEC-------FIKCSWSHSCLLM 184
+GRKPLKV V+VNTSGE E +C F C C LM
Sbjct: 122 KIGRKPLKVFVEVNTSGETSKFGVEPAQCLDLVKHIFTNCPNLEFCGLM 170
>gi|357134641|ref|XP_003568925.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Brachypodium distachyon]
Length = 243
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 112/128 (87%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA RS R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA
Sbjct: 14 LRSVLSRAQQAAARSGRAPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK K LLAGVPNL MVESVD+EKIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKAKALLAGVPNLDMVESVDDEKIANRLDRVVADLGRKPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|326526139|dbj|BAJ93246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 112/128 (87%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA R+ R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA
Sbjct: 14 LRSVLSRAQQAAARTGRSPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK K LLAGVPNL MVESVD+EKIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKAKALLAGVPNLDMVESVDDEKIANRLDRVVADLGRKPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|326511339|dbj|BAJ87683.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532008|dbj|BAK01380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 243
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 112/128 (87%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA R+ R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA
Sbjct: 14 LRSVLSRAQQAAARTGRSPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK K LLAGVPNL MVESVD+EKIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKAKALLAGVPNLDMVESVDDEKIANRLDRVVADLGRKPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|218196101|gb|EEC78528.1| hypothetical protein OsI_18473 [Oryza sativa Indica Group]
gi|222630215|gb|EEE62347.1| hypothetical protein OsJ_17136 [Oryza sativa Japonica Group]
Length = 243
Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 113/128 (88%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA RS R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA+
Sbjct: 14 LRSVLSRAQQAAARSGRAPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAS 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK + LLAGVPNL MVESVD++KIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRKPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|297603837|ref|NP_001054662.2| Os05g0150000 [Oryza sativa Japonica Group]
gi|255676024|dbj|BAF16576.2| Os05g0150000, partial [Oryza sativa Japonica Group]
Length = 214
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 113/128 (88%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA RS R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA+
Sbjct: 9 LRSVLSRAQQAAARSGRAPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAS 68
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK + LLAGVPNL MVESVD++KIA RL+R+V +GRKPLKVLV
Sbjct: 69 QLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRKPLKVLV 128
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 129 QVNTSGEE 136
>gi|56541811|emb|CAD29783.1| putative proline synthetase associated protein [Oryza sativa]
Length = 220
Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 113/128 (88%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA RS R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA+
Sbjct: 10 LRSVLSRAQQAAARSGRAPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAS 69
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK + LLAGVPNL MVESVD++KIA RL+R+V +GRKPLKVLV
Sbjct: 70 QLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRKPLKVLV 129
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 130 QVNTSGEE 137
>gi|297799306|ref|XP_002867537.1| AT4g26860/F10M23_200 [Arabidopsis lyrata subsp. lyrata]
gi|297313373|gb|EFH43796.1| AT4g26860/F10M23_200 [Arabidopsis lyrata subsp. lyrata]
Length = 244
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 116/139 (83%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A + ATALRSVI R +AAE+ R P+R+R++AVSKTKPVS+IRQ+Y+AGHRCFG
Sbjct: 2 AAPAVEATVATALRSVILRARKAAEQVGRDPERVRVLAVSKTKPVSLIRQIYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI++KA QLP+D+EWHF+G+LQSNK K LL GVPNLAMV VD EK+A L+R V
Sbjct: 62 ENYVQEIIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
T+GR PLKVLVQVNTSGE
Sbjct: 122 STLGRHPLKVLVQVNTSGE 140
>gi|116782168|gb|ABK22393.1| unknown [Picea sitchensis]
Length = 244
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 122/146 (83%), Gaps = 2/146 (1%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
M S A +G AA ALR+V++RV QAAE+S R ++R+VAVSKTKPVS+IR+VYEAGHR
Sbjct: 1 METSTAMEGAAALALRTVLRRVQQAAEKSGRQASQVRVVAVSKTKPVSLIREVYEAGHRY 60
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQEI++KA +LP D++WHFIG+LQSNK K ++AGVPNL MVESVD+ K+A L+R
Sbjct: 61 FGENYVQEILDKAPELPTDIQWHFIGHLQSNKAKAVIAGVPNLYMVESVDSSKVANHLDR 120
Query: 146 MVETMGRKPLKVLVQVNTSGEE--YG 169
V ++GRKPLKVLVQVNTSGEE YG
Sbjct: 121 AVSSIGRKPLKVLVQVNTSGEESKYG 146
>gi|449463228|ref|XP_004149336.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cucumis sativus]
Length = 245
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 115/139 (82%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ +G A ALRSV+ R QAAERS R D++R+VAVSKTKPVS+IRQVY+A HRCFG
Sbjct: 2 AAPLVEGAAVAALRSVMFRARQAAERSGRNFDQVRVVAVSKTKPVSLIRQVYDAAHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQE+++KA LP D+EWHFIG+LQSNKVK LLAGVPNLAMV+ VDNEK+A L+R V
Sbjct: 62 ENYVQELIDKAPLLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVQGVDNEKLANHLDRAV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+GR PLKVLVQVNTSGE
Sbjct: 122 SNLGRDPLKVLVQVNTSGE 140
>gi|449503195|ref|XP_004161881.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cucumis sativus]
Length = 245
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 115/139 (82%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ +G A ALRSV+ R QAAERS R D++R+VAVSKTKPVS+IRQVY+A HRCFG
Sbjct: 2 AAPLVEGAAVAALRSVMFRARQAAERSGRNFDQVRVVAVSKTKPVSLIRQVYDAAHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQE+++KA LP D+EWHFIG+LQSNKVK LLAGVPNLAMV+ VDNEK+A L+R V
Sbjct: 62 ENYVQELIDKAPLLPQDIEWHFIGHLQSNKVKSLLAGVPNLAMVQGVDNEKLANHLDRAV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+GR PLKVLVQVNTSGE
Sbjct: 122 SNLGRDPLKVLVQVNTSGE 140
>gi|240256085|ref|NP_567760.4| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|14030629|gb|AAK52989.1|AF375405_1 AT4g26860/F10M23_200 [Arabidopsis thaliana]
gi|17978899|gb|AAL47419.1| AT4g26860/F10M23_200 [Arabidopsis thaliana]
gi|21536981|gb|AAM61322.1| putative proline synthetase associated protein [Arabidopsis
thaliana]
gi|332659861|gb|AEE85261.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 244
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 114/139 (82%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A + A+ALRSVI R +AAE+ R P+R+R++ VSKTKPVS+IRQ+Y+AGHRCFG
Sbjct: 2 AAPAVEATVASALRSVILRARKAAEQVGRDPERVRVLPVSKTKPVSLIRQIYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI++KA QLP+D+EWHF+G+LQSNK K LL GVPNLAMV VD EK+A L+R V
Sbjct: 62 ENYVQEIIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+GR PLKVLVQVNTSGE
Sbjct: 122 SNLGRHPLKVLVQVNTSGE 140
>gi|334186946|ref|NP_001190850.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
gi|332659862|gb|AEE85262.1| putative pyridoxal phosphate-dependent enzyme, YBL036C type
[Arabidopsis thaliana]
Length = 254
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 114/139 (82%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A + A+ALRSVI R +AAE+ R P+R+R++ VSKTKPVS+IRQ+Y+AGHRCFG
Sbjct: 2 AAPAVEATVASALRSVILRARKAAEQVGRDPERVRVLPVSKTKPVSLIRQIYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI++KA QLP+D+EWHF+G+LQSNK K LL GVPNLAMV VD EK+A L+R V
Sbjct: 62 ENYVQEIIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+GR PLKVLVQVNTSGE
Sbjct: 122 SNLGRHPLKVLVQVNTSGE 140
>gi|116783162|gb|ABK22817.1| unknown [Picea sitchensis]
Length = 218
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 119/139 (85%), Gaps = 2/139 (1%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
+G AA ALR+V++RV QAAE+S R ++R+VAVSKTKPVS+IR+VYEAGHR FGENYVQ
Sbjct: 2 EGAAALALRTVLRRVQQAAEKSGRQASQVRVVAVSKTKPVSLIREVYEAGHRYFGENYVQ 61
Query: 93 EIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
EI++KA +LP D++WHFIG+LQSNK K ++AGVPNL MVESVD+ K+A L+R V ++GR
Sbjct: 62 EILDKAPELPTDIQWHFIGHLQSNKAKAVIAGVPNLYMVESVDSSKVANHLDRAVSSIGR 121
Query: 153 KPLKVLVQVNTSGEE--YG 169
KPLKVLVQVNTSGEE YG
Sbjct: 122 KPLKVLVQVNTSGEESKYG 140
>gi|4455209|emb|CAB36532.1| putative Proline synthetase associated protein [Arabidopsis
thaliana]
gi|7269539|emb|CAB79541.1| putative Proline synthetase associated protein [Arabidopsis
thaliana]
Length = 262
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 113/139 (81%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
A+ A + A+ALRSVI R +AAE+ R +R+R++ VSKTKPVS+IRQ+Y+AGHRCFG
Sbjct: 2 AAPAVEATVASALRSVILRARKAAEQVGRDAERVRVLPVSKTKPVSLIRQIYDAGHRCFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQEI++KA QLP+D+EWHF+G+LQSNK K LL GVPNLAMV VD EK+A L+R V
Sbjct: 62 ENYVQEIIDKAPQLPEDIEWHFVGHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAV 121
Query: 148 ETMGRKPLKVLVQVNTSGE 166
+GR PLKVLVQVNTSGE
Sbjct: 122 SNLGRHPLKVLVQVNTSGE 140
>gi|52353469|gb|AAU44036.1| unknown protein [Oryza sativa Japonica Group]
Length = 191
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 106/121 (87%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA RS R P+ +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA+
Sbjct: 14 LRSVLSRAQQAAARSGRAPESVRVVAVSKTKPVGVIRGVYDAGHRCFGENYVQELIDKAS 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK + LLAGVPNL MVESVD++KIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDQKIANRLDRVVADLGRKPLKVLV 133
Query: 160 Q 160
Q
Sbjct: 134 Q 134
>gi|242089533|ref|XP_002440599.1| hypothetical protein SORBIDRAFT_09g003850 [Sorghum bicolor]
gi|241945884|gb|EES19029.1| hypothetical protein SORBIDRAFT_09g003850 [Sorghum bicolor]
Length = 243
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 111/128 (86%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA R+ R P +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA
Sbjct: 14 LRSVLSRAQQAAARAGRAPGSVRVVAVSKTKPVPVIRGVYDAGHRCFGENYVQELIDKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK + LLAGVPNL MVESVD+EKIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDEKIASRLDRVVADLGRKPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|212275792|ref|NP_001130828.1| uncharacterized protein LOC100191932 [Zea mays]
gi|194690222|gb|ACF79195.1| unknown [Zea mays]
Length = 243
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 111/128 (86%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV+ R QAA R+ R P +R+VAVSKTKPV VIR VY+AGHRCFGENYVQE+++KA
Sbjct: 14 LRSVLSRAQQAAARAGRAPGSVRVVAVSKTKPVPVIRGVYDAGHRCFGENYVQELIDKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+EWHFIGNLQSNK + LLAGVPNL MVESVD+EKIA RL+R+V +GRKPLKVLV
Sbjct: 74 QLPEDIEWHFIGNLQSNKARALLAGVPNLDMVESVDDEKIANRLDRVVADLGRKPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|168010071|ref|XP_001757728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691004|gb|EDQ77368.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/138 (62%), Positives = 110/138 (79%)
Query: 29 SAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGE 88
+ A + ALR V+QR+ QA+ER++RP +R+VAVSKTKPV +IR+VY+AGHR FGE
Sbjct: 2 ATAAESATVQALRDVMQRIQQASERANRPVSSVRLVAVSKTKPVKMIREVYDAGHRHFGE 61
Query: 89 NYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
NYVQE+++KA Q P+D +WHFIG+LQSNK K L+ GVPNL MVE VD+EK+A L++ V
Sbjct: 62 NYVQELIDKAPQFPEDTKWHFIGHLQSNKAKALVTGVPNLYMVEGVDSEKVADHLDKAVS 121
Query: 149 TMGRKPLKVLVQVNTSGE 166
+GR PLKVLVQVNTSGE
Sbjct: 122 GLGRPPLKVLVQVNTSGE 139
>gi|168025677|ref|XP_001765360.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683413|gb|EDQ69823.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 112/138 (81%)
Query: 30 AATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGEN 89
A + VA ALR+V+QRV QA+ER++RP ++R+VAVSKTKPV ++++VY+AGHR FGEN
Sbjct: 3 ARAESVAVQALRNVMQRVSQASERANRPASQVRLVAVSKTKPVELVQEVYDAGHRHFGEN 62
Query: 90 YVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
YVQE+++KA QLP D++WHFIG+LQSNK K L+ VPNL MVE VD++K+A LNR V
Sbjct: 63 YVQELIDKAPQLPQDIKWHFIGHLQSNKAKALITSVPNLYMVEGVDSQKVANHLNRAVSG 122
Query: 150 MGRKPLKVLVQVNTSGEE 167
+GR PL VLVQVNTS EE
Sbjct: 123 LGRPPLSVLVQVNTSREE 140
>gi|351721098|ref|NP_001237710.1| uncharacterized protein LOC100527295 [Glycine max]
gi|255632027|gb|ACU16366.1| unknown [Glycine max]
Length = 239
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 110/141 (78%), Gaps = 5/141 (3%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
MAAS+ + L++V RV AAERS R IR+VA SKTK VS +R+VY+AG RC
Sbjct: 1 MAASSPS-----PPLKAVQDRVQAAAERSGRNVQEIRVVAASKTKSVSALREVYDAGLRC 55
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQE+++KA QLPDD++WH IGNLQSNKVKPL+A VPNLA VE+VD++KIA L+R
Sbjct: 56 FGENYVQELLQKAPQLPDDIQWHLIGNLQSNKVKPLIAAVPNLACVETVDDKKIANFLDR 115
Query: 146 MVETMGRKPLKVLVQVNTSGE 166
V +GRKPLKV VQVNTSGE
Sbjct: 116 AVANVGRKPLKVFVQVNTSGE 136
>gi|384246354|gb|EIE19844.1| hypothetical protein COCSUDRAFT_34111 [Coccomyxa subellipsoidea
C-169]
Length = 241
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 113/143 (79%), Gaps = 3/143 (2%)
Query: 29 SAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGE 88
SA G ATAL+SV++RV AA+RS R + R+VA+SKTKPV I++ Y++GHR FGE
Sbjct: 2 SAGNPGQVATALKSVLERVDSAAQRSGRN-SQPRLVAISKTKPVEAIQEAYDSGHRIFGE 60
Query: 89 NYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
NYVQEIV+KA +LPDD+ WHF+G+LQSNK K LL GVPNLA++E+VD EK+A +L+ ++
Sbjct: 61 NYVQEIVDKAPKLPDDIRWHFVGHLQSNKAKTLLDGVPNLALLETVDTEKLANKLDSTLQ 120
Query: 149 TMGRKPLKVLVQVNTSGEE--YG 169
+GR PL VLVQVNTSGEE YG
Sbjct: 121 QLGRAPLPVLVQVNTSGEESKYG 143
>gi|414878680|tpg|DAA55811.1| TPA: proline synthetase-like protein [Zea mays]
Length = 268
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 105/128 (82%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LR+V+ R AAERS + +R+VAV KTKPVS++RQ+Y+AGHRCFGENYVQE V KA
Sbjct: 37 LRAVLGRAGMAAERSGCAAEAVRVVAVGKTKPVSMLRQLYDAGHRCFGENYVQEFVTKAP 96
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP D WHFIG+LQSNKVKPLLA VPNL MVE VDNEKIA L+R V ++GR+PLKVLV
Sbjct: 97 QLPQDTRWHFIGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRAVNSLGRQPLKVLV 156
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 157 QVNTSGEE 164
>gi|226500772|ref|NP_001152502.1| proline synthetase-like protein [Zea mays]
gi|195656949|gb|ACG47942.1| proline synthetase-like protein [Zea mays]
Length = 245
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 105/128 (82%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LR+V+ R AAERS R + +R+VAV KTKPVS++RQ+Y+AGHRCF ENYVQE V KA
Sbjct: 14 LRAVLGRAGMAAERSGRAAEAVRVVAVGKTKPVSMLRQLYDAGHRCFSENYVQEFVTKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP D WHFIG+LQSNKVKPLLA VPNL MVE VDNEKIA L+R V ++GR+PLKVLV
Sbjct: 74 QLPQDTRWHFIGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRAVNSLGRQPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|302790652|ref|XP_002977093.1| hypothetical protein SELMODRAFT_106172 [Selaginella moellendorffii]
gi|300155069|gb|EFJ21702.1| hypothetical protein SELMODRAFT_106172 [Selaginella moellendorffii]
Length = 244
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 101/128 (78%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV +RV AAERS R ++ +VAVSKTKPVS+IR+VY+AGHR FGENYVQE ++KA
Sbjct: 15 LRSVYERVRVAAERSGRSASQVNVVAVSKTKPVSLIREVYDAGHRHFGENYVQEFIDKAP 74
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP D+ WHFIG+LQSNK K L+A VP L MVE +DN K+A L+R V + R PLKVLV
Sbjct: 75 QLPSDIRWHFIGHLQSNKAKSLVANVPQLYMVEGIDNFKVASLLDRAVSLLQRNPLKVLV 134
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 135 QVNTSGEE 142
>gi|302763195|ref|XP_002965019.1| hypothetical protein SELMODRAFT_83798 [Selaginella moellendorffii]
gi|300167252|gb|EFJ33857.1| hypothetical protein SELMODRAFT_83798 [Selaginella moellendorffii]
Length = 244
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 100/128 (78%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LRSV +RV AAERS R ++ +VAVSKTKPVS+IR+VY+AGHR FGENY QE +EKA
Sbjct: 15 LRSVYERVRVAAERSGRSASQVNVVAVSKTKPVSLIREVYDAGHRHFGENYAQEFIEKAP 74
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP D+ WHFIG+LQSNK K L+A VP L MVE +DN K+A L+R V + R PLKVLV
Sbjct: 75 QLPSDIRWHFIGHLQSNKAKSLVANVPQLYMVEGIDNFKVASLLDRAVSLLQRNPLKVLV 134
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 135 QVNTSGEE 142
>gi|222619875|gb|EEE56007.1| hypothetical protein OsJ_04770 [Oryza sativa Japonica Group]
Length = 244
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 106/128 (82%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LR+V+ R +AAERS R + +R+VAV KTKPVS++R++Y+AGHRCFGENYVQE V KA
Sbjct: 14 LRAVLGRAAKAAERSGRAAEAVRVVAVGKTKPVSMVRELYDAGHRCFGENYVQEFVTKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+ WHFIG+LQSNKVK LLA VPNL MVE VDN KIA L+R V ++GR PLKVLV
Sbjct: 74 QLPEDIRWHFIGHLQSNKVKSLLAAVPNLHMVEGVDNVKIANHLDRAVSSLGRDPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|218189740|gb|EEC72167.1| hypothetical protein OsI_05211 [Oryza sativa Indica Group]
Length = 244
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 106/128 (82%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LR+V+ R +AAERS R + +R+VAV KTKPVS++R++Y+AGHRCFGENYVQE V KA
Sbjct: 14 LRAVLGRAAKAAERSGRAAEAVRVVAVGKTKPVSMVRELYDAGHRCFGENYVQEFVTKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+ WHFIG+LQSNKVK LLA VPNL MVE VDN KIA L+R V ++GR PLKVLV
Sbjct: 74 QLPEDIRWHFIGHLQSNKVKSLLAAVPNLHMVEGVDNVKIANHLDRAVSSLGRDPLKVLV 133
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 134 QVNTSGEE 141
>gi|242059919|ref|XP_002459105.1| hypothetical protein SORBIDRAFT_03g045890 [Sorghum bicolor]
gi|241931080|gb|EES04225.1| hypothetical protein SORBIDRAFT_03g045890 [Sorghum bicolor]
Length = 248
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 102/118 (86%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHF 109
AAERS R + +R+VAV KTKPVS+++Q+Y+AGHRCFGENYVQE V KA QLP+D+ WHF
Sbjct: 27 AAERSGRAAEAVRVVAVGKTKPVSMLQQLYDAGHRCFGENYVQEFVTKAPQLPEDVRWHF 86
Query: 110 IGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
IG+LQSNKVKPLLA VPNL MVE VDNEKIA L+R V ++GR+PLKVLVQVNTSGEE
Sbjct: 87 IGHLQSNKVKPLLAAVPNLDMVEGVDNEKIANHLDRAVNSLGREPLKVLVQVNTSGEE 144
>gi|357126794|ref|XP_003565072.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Brachypodium distachyon]
Length = 249
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 107/128 (83%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+R+V+ R +AAERS R + +R+VAV KTKPVS++RQ+Y+AGHRCFGENYVQE V KA
Sbjct: 17 MRTVLARAGRAAERSGRAAEAVRVVAVGKTKPVSLLRQLYDAGHRCFGENYVQEFVTKAP 76
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+ WHF+G+LQSNKVK L+A VPNL MVE V NEKIA L+R V ++GR+PLKV+V
Sbjct: 77 QLPEDIRWHFVGHLQSNKVKSLVAAVPNLDMVEGVGNEKIANHLDRAVVSLGREPLKVMV 136
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 137 QVNTSGEE 144
>gi|302847524|ref|XP_002955296.1| hypothetical protein VOLCADRAFT_65697 [Volvox carteri f.
nagariensis]
gi|300259368|gb|EFJ43596.1| hypothetical protein VOLCADRAFT_65697 [Volvox carteri f.
nagariensis]
Length = 250
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 109/142 (76%), Gaps = 8/142 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
+TAL+ V+ R+ QA+ER+ R +R+VAVSKTKPV +++ Y+AG R FGENYVQE+++
Sbjct: 7 STALQDVLTRMKQASERAGRT-QSVRLVAVSKTKPVEALQEAYDAGQRVFGENYVQEMLD 65
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPL 155
KA LP D++WHFIG+LQSNKVK ++ VPNLAMVE+VD+ K+A +LNR VE GR +PL
Sbjct: 66 KAPALPSDVQWHFIGHLQSNKVKAVVENVPNLAMVETVDSTKLADKLNRAVEVAGRTQPL 125
Query: 156 KVLVQVNTSGEEY------GEC 171
V+VQVNTSGEE GEC
Sbjct: 126 AVMVQVNTSGEESKFGVEPGEC 147
>gi|57900473|dbj|BAD87885.1| alanine racemase-like [Oryza sativa Japonica Group]
Length = 192
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/121 (67%), Positives = 99/121 (81%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LR+V+ R +AAERS R + +R+VAV KTKPVS++R++Y+AGHRCFGENYVQE V KA
Sbjct: 14 LRAVLGRAAKAAERSGRAAEAVRVVAVGKTKPVSMVRELYDAGHRCFGENYVQEFVTKAP 73
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP+D+ WHFIG+LQSNKVK LLA VPNL MVE VDN KIA L+R V ++GR PLKVLV
Sbjct: 74 QLPEDIRWHFIGHLQSNKVKSLLAAVPNLHMVEGVDNVKIANHLDRAVSSLGRDPLKVLV 133
Query: 160 Q 160
Q
Sbjct: 134 Q 134
>gi|159463278|ref|XP_001689869.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283857|gb|EDP09607.1| predicted protein [Chlamydomonas reinhardtii]
Length = 251
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 109/144 (75%), Gaps = 8/144 (5%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
D A AL+ V+ R+ QA ER++R +R+VAVSKTKP +++ Y+AG R FGENYVQ
Sbjct: 3 DKPIAAALQDVLSRMKQATERANRT-HPVRLVAVSKTKPAEALQEAYDAGQRVFGENYVQ 61
Query: 93 ---EIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
E+++KA LP D++WHFIG+LQSNKVK +L GVPNLAMVE+VD+ K+A +LN+ +ET
Sbjct: 62 ARCEMLDKAPALPGDVQWHFIGHLQSNKVKAVLEGVPNLAMVETVDSAKLADKLNKTLET 121
Query: 150 M-GRK-PLKVLVQVNTSGEE--YG 169
+ GR PL V+VQVNTSGEE YG
Sbjct: 122 VSGRTAPLAVMVQVNTSGEESKYG 145
>gi|308799451|ref|XP_003074506.1| alanine racemase family protein (ISS) [Ostreococcus tauri]
gi|116000677|emb|CAL50357.1| alanine racemase family protein (ISS) [Ostreococcus tauri]
Length = 236
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 94/128 (73%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V+QRV A RS R +R+VAVSKTKP ++ Y+AGHR FGENYVQE+++KA
Sbjct: 7 IADVLQRVASACARSGRDGGSVRVVAVSKTKPSDAVKACYDAGHRSFGENYVQELIDKAP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LPDD+ WHF+G+LQSNK K LL GVP+LAM+E++D+EK+A ++N V L V+V
Sbjct: 67 TLPDDVRWHFVGHLQSNKAKALLEGVPSLAMLETIDSEKLANKVNNAVPERRANALDVMV 126
Query: 160 QVNTSGEE 167
QVNTSGEE
Sbjct: 127 QVNTSGEE 134
>gi|227202822|dbj|BAH56884.1| AT1G11930 [Arabidopsis thaliana]
Length = 121
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 89/104 (85%), Gaps = 3/104 (2%)
Query: 19 EQVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQV 78
E V TM+A AA DGVAA LRSV QRV+QAAE++ R D+IR+VAVSKTKPVS+IRQV
Sbjct: 9 EHVADSTMSA-AAIDGVAA--LRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQV 65
Query: 79 YEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
Y+AG R FGENYVQEI+EKA QLP+D+EWHFIGNLQSNKVKPLL
Sbjct: 66 YDAGQRSFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLL 109
>gi|449434390|ref|XP_004134979.1| PREDICTED: uncharacterized protein LOC101211065 [Cucumis sativus]
Length = 596
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/99 (75%), Positives = 85/99 (85%), Gaps = 2/99 (2%)
Query: 26 MAASAATDGV--AATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGH 83
MA+SAA +G A+ AL SV+QRV AAERS R P +IR+VAVSKTKPV VIRQVY+AGH
Sbjct: 272 MASSAAIEGATPASAALNSVLQRVQLAAERSGRVPQQIRVVAVSKTKPVPVIRQVYDAGH 331
Query: 84 RCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
R FGENYVQE+VEKA QLP+D+EWHFIGNLQSNKVKPLL
Sbjct: 332 RYFGENYVQELVEKAPQLPEDIEWHFIGNLQSNKVKPLL 370
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 131 VESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VE+ + IA RL+RMVE++GRKPLKV +QVNTSGEE
Sbjct: 458 VETPTHLFIANRLDRMVESIGRKPLKVFIQVNTSGEE 494
>gi|307110697|gb|EFN58933.1| hypothetical protein CHLNCDRAFT_48564 [Chlorella variabilis]
Length = 223
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
+VAVSKTKP +R+ YEAGHR FGENYVQE+ +KA LP D WHFIG+LQSNKVK LL
Sbjct: 17 LVAVSKTKPAEAVREAYEAGHRVFGENYVQELADKAPLLPQDCAWHFIGHLQSNKVKALL 76
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YG 169
VPNLA++E+VD+ K+A +L+ V ++GR PL V VQVNTSGEE YG
Sbjct: 77 EAVPNLALLETVDSAKLASKLDSTVASLGRPPLAVFVQVNTSGEESKYG 125
>gi|356532307|ref|XP_003534715.1| PREDICTED: LOW QUALITY PROTEIN: proline synthase co-transcribed
bacterial homolog protein-like [Glycine max]
Length = 225
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 89/126 (70%), Gaps = 16/126 (12%)
Query: 51 AERSSRPP---------DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL 101
A S PP + IR+VA S R+VY+AG RCFGENYVQEI+ KA QL
Sbjct: 2 AASSQSPPLKAVLERNVEEIRVVAASSX------REVYDAGRRCFGENYVQEILHKAPQL 55
Query: 102 PDDLEWH-FIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
PDD+EWH IGNLQSNKVKPL+A VPNLA V++VD+EKIA L+R VE +GRK LKV Q
Sbjct: 56 PDDIEWHNLIGNLQSNKVKPLIAAVPNLACVQTVDDEKIANLLDRAVENVGRKSLKVFFQ 115
Query: 161 VNTSGE 166
VNTSGE
Sbjct: 116 VNTSGE 121
>gi|412994038|emb|CCO14549.1| predicted protein [Bathycoccus prasinos]
Length = 245
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 98/133 (73%), Gaps = 6/133 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ R+ A+ + + R+VAVSKTKPV +R+VY+AGH+ FGENYVQEI+EKA +LP
Sbjct: 13 VLSRITVASSQRASTSAATRLVAVSKTKPVEQLREVYDAGHKIFGENYVQEILEKAPKLP 72
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG----RKPLKVL 158
+D+ WHF+G++QSNK K L+ GVPNL +VE+VD++K+A +LN VE + L V+
Sbjct: 73 NDISWHFVGHIQSNKAKALVQGVPNLKVVETVDSKKLADKLNVAVEQCKALREERLLDVM 132
Query: 159 VQVNTSGEE--YG 169
VQVNTSGEE YG
Sbjct: 133 VQVNTSGEESKYG 145
>gi|255084663|ref|XP_002508906.1| predicted protein [Micromonas sp. RCC299]
gi|226524183|gb|ACO70164.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 91/126 (72%), Gaps = 9/126 (7%)
Query: 49 QAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWH 108
++ R+S P R+VAVSKTKPV +R+ Y+AG RCFGENYVQEIVEKA Q+P D WH
Sbjct: 20 RSTARASTNP--ARLVAVSKTKPVEQLRECYDAGQRCFGENYVQEIVEKAPQMPPDTVWH 77
Query: 109 FIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV-------ETMGRKPLKVLVQV 161
FIG+LQSNKVK L+ GVP+LA+VE+VD K+A +LN V +G L V+VQV
Sbjct: 78 FIGHLQSNKVKALVTGVPSLAVVETVDTVKLANKLNTAVGEFLEERARVGAGKLGVMVQV 137
Query: 162 NTSGEE 167
NTSGEE
Sbjct: 138 NTSGEE 143
>gi|407394171|gb|EKF26821.1| alanine racemase, putative [Trypanosoma cruzi marinkellei]
Length = 252
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 98/137 (71%), Gaps = 6/137 (4%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
T GV A ++V++R+ A+ RP + +VAVSKTK + ++ +Y+ GHRCFGENYV
Sbjct: 11 TAGVIADNYKNVLERMDAAS--GGRP---VTLVAVSKTKSPACVQALYDCGHRCFGENYV 65
Query: 92 QEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM- 150
QE+VEKA LP D++WHFIG+LQSNKVK LL GV L +V++VD+EK+A +LN T
Sbjct: 66 QELVEKAGVLPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLAAKLNTGCVTYR 125
Query: 151 GRKPLKVLVQVNTSGEE 167
G + L V +QVNTSGEE
Sbjct: 126 GGRSLNVYIQVNTSGEE 142
>gi|359494361|ref|XP_003634766.1| PREDICTED: UPF0001 protein YBL036C-like [Vitis vinifera]
Length = 163
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 97/142 (68%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A LRSVI RV Q AERS R D++R++AVS+TKPVS I QV++ GHRCFGE+YVQE+ E
Sbjct: 4 ARPLRSVIFRVRQTAERSDRRSDQVRVMAVSRTKPVSHIWQVHDVGHRCFGESYVQEMNE 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+A QLP D+EW+FI +L+SNK+K LLA V NLAMVE V+NEK A + ++++ +
Sbjct: 64 RAPQLPKDIEWYFIEHLRSNKMKQLLATVLNLAMVEGVNNEKKAFEAAKQLQSIADNSIP 123
Query: 157 VLVQVNTSGEEYGECFIKCSWS 178
++ + F+ W+
Sbjct: 124 LMNGLAVPVFALSYAFMFVLWA 145
>gi|407867709|gb|EKG08627.1| alanine racemase, putative [Trypanosoma cruzi]
Length = 252
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
T G A ++V+ R+ A+ RP + +VAVSKTK + ++ +Y+ GHRCFGENYV
Sbjct: 11 TAGEIAENYKNVLGRMDAAS--GGRP---VTLVAVSKTKSPACVQALYDCGHRCFGENYV 65
Query: 92 QEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM- 150
QE+VEKA LP D++WHFIG+LQSNKVK LL GV L +V++VD+EK+A +LN T
Sbjct: 66 QELVEKAGVLPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLATKLNNGCVTYR 125
Query: 151 GRKPLKVLVQVNTSGEE 167
G + L V +QVNTSGEE
Sbjct: 126 GGRSLNVYIQVNTSGEE 142
>gi|71652235|ref|XP_814779.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879780|gb|EAN92928.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 252
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
T G A ++V+ R+ A+ RP + +VAVSKTK + ++ +Y+ GHRCFGENYV
Sbjct: 11 TAGEIAENYKNVLGRMDAAS--GGRP---VTLVAVSKTKSPACVQALYDCGHRCFGENYV 65
Query: 92 QEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM- 150
QE+VEKA LP D++WHFIG+LQSNKVK LL GV L +V++VD+EK+A +LN T
Sbjct: 66 QELVEKAGVLPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLATKLNNGCVTYR 125
Query: 151 GRKPLKVLVQVNTSGEE 167
G + L V +QVNTSGEE
Sbjct: 126 GGRSLNVYIQVNTSGEE 142
>gi|449019568|dbj|BAM82970.1| probable proline synthetase associated protein [Cyanidioschyzon
merolae strain 10D]
Length = 269
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 91/126 (72%), Gaps = 3/126 (2%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V +R+ AA + R P R+R+VAVSKT +R+ Y+AG R FGENYVQE+VEKA QLP
Sbjct: 45 VRERIQVAALAAKRDPARVRLVAVSKTHAAGTVREAYDAGQRHFGENYVQELVEKAEQLP 104
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM--GRKPLKVLVQ 160
D+ WHFIG+LQSNKV+ LL+ VPNL VE+VD K+A LNR+++ + P+ V+VQ
Sbjct: 105 TDINWHFIGHLQSNKVRTLLS-VPNLWCVETVDRPKLANTLNRLMDELRPDGGPIPVMVQ 163
Query: 161 VNTSGE 166
VN SGE
Sbjct: 164 VNVSGE 169
>gi|147779422|emb|CAN72285.1| hypothetical protein VITISV_013531 [Vitis vinifera]
Length = 940
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 83/102 (81%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A LRSVI RV Q AERS R D++R++AVS+TKPVS I QV++ GHRCFGE+YVQE+ E
Sbjct: 654 ARPLRSVIFRVRQTAERSDRRSDQVRVMAVSRTKPVSHIWQVHDVGHRCFGESYVQEMNE 713
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
+A QLP D+EW+FI +L+SNK+K LLA V NLAMVE V+NEK
Sbjct: 714 RAPQLPKDIEWYFIEHLRSNKMKQLLATVLNLAMVEGVNNEK 755
>gi|145340986|ref|XP_001415597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575820|gb|ABO93889.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 237
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 6/117 (5%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+R+VAVSKTKPV +++ Y+AGHR FGENYVQE++EK ++P+D WHFIG+LQSNK K
Sbjct: 30 VRLVAVSKTKPVEQLKECYDAGHRDFGENYVQEMIEKVPRMPEDTRWHFIGHLQSNKCKA 89
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE------EYGEC 171
LL P LAM+E+VD+ K+A +LN V L+VLVQVNTSGE E G+C
Sbjct: 90 LLEACPRLAMLETVDSAKLANKLNAAVPEGRVDALRVLVQVNTSGEASKHGVEPGDC 146
>gi|71657511|ref|XP_817270.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882450|gb|EAN95419.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 252
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 95/137 (69%), Gaps = 6/137 (4%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
T G A ++V+ R+ A+ RP + +VA SKTK + ++ +Y+ GHRCFGENYV
Sbjct: 11 TAGEIAENYKNVLGRMEAAS--GGRP---VTLVAASKTKSPACVQALYDCGHRCFGENYV 65
Query: 92 QEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM- 150
QE+VEKA LP D++WHFIG+LQSNKVK LL GV L +V++VD+EK+A +LN T
Sbjct: 66 QELVEKAGVLPKDIQWHFIGHLQSNKVKELLEGVDGLYLVQTVDSEKLATKLNNGCVTYR 125
Query: 151 GRKPLKVLVQVNTSGEE 167
G + L V +QVNTSGEE
Sbjct: 126 GGRSLNVYIQVNTSGEE 142
>gi|452823256|gb|EME30268.1| hypothetical protein Gasu_24180 [Galdieria sulphuraria]
Length = 225
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G+ AL + ++V + + R D R+VAVSKTKP S+I + Y+AGHR FGENYVQE
Sbjct: 65 GLVKQALCGITEQVQRICVQCGRGNDIPRLVAVSKTKPPSLIMEAYDAGHRHFGENYVQE 124
Query: 94 IVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
+VEKAA LP D+ WHFIG+LQSNKVK LL + NL +VE+VD ++A L R +GR
Sbjct: 125 LVEKAAALPKDIRWHFIGHLQSNKVKRLLE-IDNLWIVETVDRAEVADALERQCVKVGRS 183
Query: 154 PLKVLVQVNTSGEE 167
+ +QVNTS EE
Sbjct: 184 SFNIYLQVNTSNEE 197
>gi|428177707|gb|EKX46585.1| hypothetical protein GUITHDRAFT_107372 [Guillardia theta CCMP2712]
Length = 302
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 80/106 (75%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+VAVSK P I + YEA R FGENYVQEI EKA QLP D++WHFIG+LQSNK K L
Sbjct: 29 RLVAVSKLMPNEAIMEAYEADQRHFGENYVQEICEKAPQLPSDIKWHFIGHLQSNKAKML 88
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+ GVPNL MVESVD+ K+A +L++ + + R L+V++QVNTS EE
Sbjct: 89 VQGVPNLFMVESVDSSKLANQLDKACDAVKRDLLQVMLQVNTSKEE 134
>gi|299472696|emb|CBN79867.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 252
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
Query: 20 QVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVY 79
++++E A A+ A+R ++ V E P R+VAVSKTKP+ ++ Y
Sbjct: 5 ELKSEPKATGASPIADNLEAVRKRVEEVTGEGEAGKPVP---RLVAVSKTKPLENLQDAY 61
Query: 80 EAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
+AG R FGENY QE+++K+ Q+PDD+ WHFIG+LQSNK K L+AGVPNLA++E++D K+
Sbjct: 62 DAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKL 121
Query: 140 AGRLNRMVETMGRK-PLKVLVQVNTSGEE 167
A +L + RK PL V +Q++TSGE+
Sbjct: 122 ANKLQSACVSSERKRPLGVYLQIDTSGED 150
>gi|72389014|ref|XP_844802.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176349|gb|AAX70461.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801336|gb|AAZ11243.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261328062|emb|CBH11039.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 257
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
Query: 59 DR-IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
DR +++VAVSKTK + ++ +Y+ GHR FGENYVQE+VEKAA LP D+ WHFIG+LQSNK
Sbjct: 40 DRAVKLVAVSKTKSPACLQALYDCGHRDFGENYVQEVVEKAAVLPGDIHWHFIGHLQSNK 99
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNR-MVETMGRKPLKVLVQVNTSGE 166
VK LL+GV L +V++VD+E +A +L+ V G +PL V VQVNTSGE
Sbjct: 100 VKELLSGVSGLQIVQTVDSESLAQKLDSGCVSYRGGRPLDVYVQVNTSGE 149
>gi|118377078|ref|XP_001021721.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89303487|gb|EAS01475.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 262
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +L+ VI +V+ A + S++ R IV SKTKP+ +++Q Y+AG R FGENYV EIV
Sbjct: 6 AKSLKQVIDKVNSAIKNSTKTS-RCTIVGASKTKPLELLQQAYDAGLRHFGENYVDEIVT 64
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KA +LP D++WH+IG+LQ+NK+K +L VPNL M+E++D+ K+A ++N+ + + +K LK
Sbjct: 65 KAPKLPQDIKWHYIGHLQTNKIKQVL--VPNLYMLETIDSIKLATKVNKECQKLSKK-LK 121
Query: 157 VLVQVNTSGEE 167
VL+QV TS E+
Sbjct: 122 VLIQVKTSTED 132
>gi|58271268|ref|XP_572790.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114774|ref|XP_773685.1| hypothetical protein CNBH1400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256313|gb|EAL19038.1| hypothetical protein CNBH1400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229049|gb|AAW45483.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 259
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A+ LR I V Q + ++ + R+VAVSK KP S I+ +Y+AG+R FGENY+QE+V+
Sbjct: 14 ASDLRENIAAVQQDIDNAAGTGAKPRLVAVSKLKPASDIKALYDAGYRHFGENYIQEMVD 73
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KAA LPDD++WHFIG+LQSNK K L A VPNL ++E++ + K+A L + + + L
Sbjct: 74 KAAALPDDIKWHFIGSLQSNKSK-LAASVPNLFILETLSSTKVADLLQKSLPPSRQSKLN 132
Query: 157 VLVQVNTSGEE 167
V +QVNTSGE+
Sbjct: 133 VYLQVNTSGED 143
>gi|223995373|ref|XP_002287370.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976486|gb|EED94813.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 262
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 10/151 (6%)
Query: 27 AASAATDGVAATA-LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
+A+A++D + +A + SV QR+ A + R +R+VAVSKTKP+ ++ YE G R
Sbjct: 11 SAAASSDKLNISANIASVKQRMEYAIAANDREAGSVRLVAVSKTKPLELLVAAYETGQRY 70
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL--AGVPNLAMVESVDNEKIAGRL 143
FGENY QE++ K+ ++PDD+ WHFIG LQSNK PL+ G+ LA +E+V K+A +L
Sbjct: 71 FGENYAQELMTKSTEMPDDVAWHFIGPLQSNKAAPLVKTVGLNKLACIETVSTIKLASKL 130
Query: 144 NRMVETMG-------RKPLKVLVQVNTSGEE 167
NR ET +K L + +QVNTSGE+
Sbjct: 131 NRAAETWNEESGSDEKKKLGIYIQVNTSGED 161
>gi|320581837|gb|EFW96056.1| Single-domain racemase, possibly non-specific due to the lack of
the second domain [Ogataea parapolymorpha DL-1]
Length = 236
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 85/125 (68%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
++ ++ A+R D+ R+V VSK KP S I+ +Y+AG+R FGENYVQE++EKA LP
Sbjct: 13 LVSNANKIAQRVKELNDKARLVCVSKFKPASDIKALYDAGYRHFGENYVQELLEKAKVLP 72
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D++WHFIG LQ+NK K L + NL VE++D EK A +LN + G+ + V +QVN
Sbjct: 73 KDIQWHFIGGLQTNKTKDLAKNIDNLYAVETIDTEKKARKLNDVRAQCGKPIINVYIQVN 132
Query: 163 TSGEE 167
TSGEE
Sbjct: 133 TSGEE 137
>gi|340053591|emb|CCC47884.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 255
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERS-SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCF 86
AS + V A R V++R+ A + P +++VAV KTK +R +Y+ GHR F
Sbjct: 7 ASEPSVAVIAENYREVLERIRTATGAAQDHPTGSVQLVAVGKTKSPQCLRALYDCGHRDF 66
Query: 87 GENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR- 145
GENYVQE+VEK+AQL +D+ WHFIG+LQSNKV+ LL GV L +V +VD +A +L+
Sbjct: 67 GENYVQELVEKSAQLAEDIRWHFIGHLQSNKVRDLLEGVKGLTLVHTVDRTSLATKLDDG 126
Query: 146 MVETMGRKPLKVLVQVNTSGE 166
G +PL V +QVNTSGE
Sbjct: 127 CTRYRGGRPLDVYLQVNTSGE 147
>gi|405122363|gb|AFR97130.1| alanine racemase [Cryptococcus neoformans var. grubii H99]
Length = 259
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 93/129 (72%), Gaps = 5/129 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
++ +V Q V AA S++P R+VAVSK KP S I+ +Y+AG+R FGENY+QE+V+KA
Sbjct: 20 SIAAVQQDVDNAAGTSAKP----RLVAVSKLKPASDIKALYDAGYRHFGENYIQEMVDKA 75
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
A LP+D++WHFIG+LQSNK K L A VPNL ++E++ + K+A L + + + L V
Sbjct: 76 AVLPEDIKWHFIGSLQSNKSK-LAASVPNLFILETLSSTKVADLLQKSLPPSRQSKLNVY 134
Query: 159 VQVNTSGEE 167
+QVNTSGE+
Sbjct: 135 LQVNTSGED 143
>gi|397571390|gb|EJK47773.1| hypothetical protein THAOC_33490 [Thalassiosira oceanica]
Length = 305
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 90/138 (65%), Gaps = 7/138 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A+ + SV QR+ +A SS P +R++AVSKTKP+ +++ Y+ G R FGENY QE +
Sbjct: 67 ASNIASVRQRIDEAINDSSLEPGSVRLIAVSKTKPIPLLQAAYDCGQRYFGENYAQECMA 126
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLL--AGVPNLAMVESVDNEKIAGRLNRMVETM---- 150
K+ +LPDD+ WHFIG LQSNK L+ G+ L +E+V K+A +LN V+TM
Sbjct: 127 KSKELPDDVCWHFIGPLQSNKAAALVKTVGLDKLKCIETVSTIKLANKLNNAVKTMNEEL 186
Query: 151 -GRKPLKVLVQVNTSGEE 167
+K L + +QVNTSGEE
Sbjct: 187 DAKKTLGIYIQVNTSGEE 204
>gi|224080861|ref|XP_002193974.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Taeniopygia guttata]
Length = 276
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 12/150 (8%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A AA DG+ ALR+V ++V QAA R + P + R+VAVSKTKPV ++ + Y G R
Sbjct: 4 AGMAAGDGLGP-ALRAVTEQVQQAAARRPQGLPAVQPRLVAVSKTKPVEMVMEAYGHGQR 62
Query: 85 CFGENYVQEIVEKAAQ------LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
FGENYVQE++EKA+ P D++WHFIG+LQ N V L+A VPNL M+E+VD+ K
Sbjct: 63 SFGENYVQELLEKASDSRILSSCP-DIKWHFIGHLQKNNVNKLIA-VPNLFMLETVDSVK 120
Query: 139 IAGRLNRMVETMG-RKPLKVLVQVNTSGEE 167
+A R+N + G + LKV+VQVNTSGE+
Sbjct: 121 LADRVNSSWQKKGSSQKLKVMVQVNTSGED 150
>gi|348687058|gb|EGZ26872.1| hypothetical protein PHYSODRAFT_348828 [Phytophthora sojae]
Length = 234
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L +V +V +A +S+R + +VAVSKTKPV +++ YEA R FGENY+QE+V+
Sbjct: 4 AKNLLAVRAKVAEAVAKSARQ-QQCTLVAVSKTKPVEDLQEAYEADQRHFGENYIQELVQ 62
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KA LP D++WH+IG++QSNK KPL+ VPNL +VE+VD+ KIA LN+ + L
Sbjct: 63 KAPLLPKDVKWHYIGHVQSNKAKPLVRDVPNLFVVETVDSIKIANALNKASGEFRSEKLN 122
Query: 157 VLVQVNTSGEE 167
V+VQVNTS EE
Sbjct: 123 VMVQVNTSEEE 133
>gi|157869914|ref|XP_001683508.1| putative alanine racemase [Leishmania major strain Friedlin]
gi|68126573|emb|CAJ05058.1| putative alanine racemase [Leishmania major strain Friedlin]
Length = 245
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 6/141 (4%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
AS T A ++V V Q E +R R+ ++AVSKTK + + +Y G R FG
Sbjct: 7 ASEPTAETLALNYKAVCDTVAQ--ESGNR---RVTLIAVSKTKSPACLLNLYNLGQRVFG 61
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQE+ EKA +LP+D WHFIG+LQSNKVK LL GVPNL +V+++D+E +A ++N
Sbjct: 62 ENYVQELGEKAKELPEDTVWHFIGHLQSNKVKELLEGVPNLRVVQTIDSENLASKVNEGC 121
Query: 148 ETM-GRKPLKVLVQVNTSGEE 167
G +PL+V +QVNTSGEE
Sbjct: 122 RKYRGGRPLEVYIQVNTSGEE 142
>gi|11359716|pir||T46722 conserved hypothetical protein [imported] - Leishmania major
Length = 389
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 93/141 (65%), Gaps = 6/141 (4%)
Query: 28 ASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
AS T A ++V V Q E +R R+ ++AVSKTK + + +Y G R FG
Sbjct: 151 ASEPTAETLALNYKAVCDTVAQ--ESGNR---RVTLIAVSKTKSPACLLNLYNLGQRVFG 205
Query: 88 ENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
ENYVQE+ EKA +LP+D WHFIG+LQSNKVK LL GVPNL +V+++D+E +A ++N
Sbjct: 206 ENYVQELGEKAKELPEDTVWHFIGHLQSNKVKELLEGVPNLRVVQTIDSENLASKVNEGC 265
Query: 148 ETM-GRKPLKVLVQVNTSGEE 167
G +PL+V +QVNTSGEE
Sbjct: 266 RKYRGGRPLEVYIQVNTSGEE 286
>gi|353227567|emb|CCA78070.1| related to Putative unspecific racemase [Piriformospora indica DSM
11827]
Length = 271
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +L V Q V A+ER S +VAVSK KP S + Y+AGHR FGENYV E+VE
Sbjct: 15 AESLAEVRQLVKNASERRSEQQSFPTLVAVSKIKPASDVMGCYDAGHRDFGENYVNELVE 74
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KA LP D+ WHFIG LQSNK K LLA VPNL +V+++ + K A L+R + PL
Sbjct: 75 KAEILPRDIRWHFIGTLQSNKAK-LLAHVPNLYVVQTLTSAKAATALDRNLPETRETPLN 133
Query: 157 VLVQVNTSGEE 167
V++QVNTSGE+
Sbjct: 134 VMLQVNTSGEQ 144
>gi|342180952|emb|CCC90429.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 258
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 93/131 (70%), Gaps = 4/131 (3%)
Query: 41 RSVIQRVHQA-AERSS-RPPDR-IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
R V+ R+ +A AE +S R + +R++AVSKTK + ++ +Y+ GHR FGENYVQEIV K
Sbjct: 20 REVLGRIERALAESTSVRTTNHSVRLIAVSKTKSPACLQALYDCGHREFGENYVQEIVAK 79
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV-ETMGRKPLK 156
A LPDD++WHFIG+LQSNKVK LL+ V L +V+S+D +A +L + T +PL
Sbjct: 80 APVLPDDIQWHFIGHLQSNKVKELLSTVKGLQLVQSIDTISLAQKLKTVARRTATGRPLD 139
Query: 157 VLVQVNTSGEE 167
V VQVNTSGEE
Sbjct: 140 VYVQVNTSGEE 150
>gi|260826782|ref|XP_002608344.1| hypothetical protein BRAFLDRAFT_126227 [Branchiostoma floridae]
gi|229293695|gb|EEN64354.1| hypothetical protein BRAFLDRAFT_126227 [Branchiostoma floridae]
Length = 295
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 97/148 (65%), Gaps = 11/148 (7%)
Query: 29 SAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCF 86
+A D ALRSV+ RV AA + P + R+VAV+KTKP +I Y+AG R F
Sbjct: 5 AAMVDSEVGRALRSVLDRVQTAAAKRPEHLPKVQPRLVAVTKTKPKELILSAYKAGQRHF 64
Query: 87 GENYVQEIVEKAA------QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIA 140
GENYVQE+ +KA+ QL +D+ WHFIG+LQ NKV + G+PNL MVE+VD+EK+A
Sbjct: 65 GENYVQELTDKASDPEIVGQL-NDIRWHFIGHLQRNKVNK-VTGIPNLYMVETVDSEKLA 122
Query: 141 GRLNRMVETMGRKP-LKVLVQVNTSGEE 167
+N E +GR LKV++QVNTS EE
Sbjct: 123 TAINASWEKLGRTDRLKVMIQVNTSREE 150
>gi|401422629|ref|XP_003875802.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492041|emb|CBZ27316.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 245
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
R+ ++AV KTK + + +Y G R FGENYVQE+ EKA +LP+D WHFIG+LQSNKVK
Sbjct: 34 RVTLIAVGKTKSPACLLNLYNLGQRVFGENYVQELGEKAKELPEDTMWHFIGHLQSNKVK 93
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM-GRKPLKVLVQVNTSGEE 167
LL GVPNL +++++D+E +A ++N G +PL+V VQVNTSGEE
Sbjct: 94 ELLEGVPNLRVIQTIDSENLASKVNEGCRKYRGGRPLEVYVQVNTSGEE 142
>gi|343474968|emb|CCD13524.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 258
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 89/135 (65%), Gaps = 4/135 (2%)
Query: 37 ATALRSVIQRVHQAAERSSR---PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
A R V+ R+ +A S+ +R++AVSKTK + ++ +Y+ GHR FGENYVQE
Sbjct: 16 AVNYREVLGRIERALAESTSVRTTNHSVRLIAVSKTKSPACLQALYDCGHREFGENYVQE 75
Query: 94 IVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRMVETMGR 152
IV KA LPDD++WHFIG+LQSNKVK LL+ V L +V+S+D +A +L N
Sbjct: 76 IVAKAPVLPDDIQWHFIGHLQSNKVKELLSTVKGLQLVQSIDTISLAQKLENGCTAYRDG 135
Query: 153 KPLKVLVQVNTSGEE 167
+PL V VQVNTSGEE
Sbjct: 136 RPLDVYVQVNTSGEE 150
>gi|242211403|ref|XP_002471540.1| predicted protein [Postia placenta Mad-698-R]
gi|220729399|gb|EED83274.1| predicted protein [Postia placenta Mad-698-R]
Length = 259
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 86/129 (66%), Gaps = 3/129 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDR-IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
L+ + QRV QA SS P DR +VAVSK KP S + +E G FGENYVQE+V+KA
Sbjct: 10 LQEIRQRVRQAIA-SSAPVDRQPTLVAVSKYKPASDVLACFELGQIDFGENYVQELVDKA 68
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
QLP D+ WHFIG LQSNK K +LA +PNL V++V + K A LN+ + PL VL
Sbjct: 69 EQLPTDIRWHFIGTLQSNKAK-ILASIPNLYAVQTVTSTKAATALNKALPAERASPLNVL 127
Query: 159 VQVNTSGEE 167
VQVNTSGE+
Sbjct: 128 VQVNTSGED 136
>gi|146087566|ref|XP_001465860.1| putative alanine racemase [Leishmania infantum JPCM5]
gi|398015782|ref|XP_003861080.1| hypothetical protein, conserved [Leishmania donovani]
gi|134069960|emb|CAM68291.1| putative alanine racemase [Leishmania infantum JPCM5]
gi|322499304|emb|CBZ34378.1| hypothetical protein, conserved [Leishmania donovani]
Length = 245
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
R+ ++AVSKTK + + +Y G R FGENYVQE+ EKA LP+D WHFIG+LQSNKVK
Sbjct: 34 RVTLIAVSKTKSPACLLNLYNLGQRVFGENYVQELGEKAKVLPEDTVWHFIGHLQSNKVK 93
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM-GRKPLKVLVQVNTSGEE 167
LL GVPNL +++++D+E +A ++N G +PL+V +QVNTSGEE
Sbjct: 94 ELLEGVPNLRVIQTIDSENLASKVNEGCRKYRGGRPLEVYIQVNTSGEE 142
>gi|401884377|gb|EJT48544.1| hypothetical protein A1Q1_02452 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695612|gb|EKC98914.1| hypothetical protein A1Q2_06668 [Trichosporon asahii var. asahii
CBS 8904]
Length = 272
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%), Gaps = 8/139 (5%)
Query: 30 AATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGEN 89
A G + +RS + R + A+ S+P R+VA+SK KP S I+ +Y+AGHR FGEN
Sbjct: 29 AKPSGSNVSCIRSQLSRPRELAD--SQP----RLVAISKIKPPSDIQALYDAGHRHFGEN 82
Query: 90 YVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
Y+QE+ EKA LP D+ WHF+G+LQSNK K +LA +PNL ++E++ +EK+AG L + +
Sbjct: 83 YIQELAEKAPLLPKDICWHFVGSLQSNKSK-MLAAIPNLFVLETLSSEKLAGTLQKALHA 141
Query: 150 MG-RKPLKVLVQVNTSGEE 167
+ + ++V +QVNTSGE+
Sbjct: 142 LPEERTMRVYLQVNTSGED 160
>gi|428186182|gb|EKX55033.1| hypothetical protein GUITHDRAFT_63073 [Guillardia theta CCMP2712]
Length = 238
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSN 116
PP+ +VAVSK +PV I + Y+AG R FGENYVQEIV KA LP+D++WHFIG LQSN
Sbjct: 30 PPN---LVAVSKFQPVETILEAYQAGQRMFGENYVQEIVSKAPSLPEDIQWHFIGMLQSN 86
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK-PLKVLVQVNTSGEE 167
K K L++GV NL +VESV + K A LN + R+ PLK+ +QV TSGEE
Sbjct: 87 KAKQLVSGVKNLEVVESVHSAKTATALNNACMSAERRSPLKIYIQVLTSGEE 138
>gi|327284097|ref|XP_003226775.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Anolis carolinensis]
Length = 276
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 101/150 (67%), Gaps = 12/150 (8%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAER--SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A AA +G+ A ALR+V ++V QA R S P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGMAAGEGLGA-ALRTVREQVQQATARRPQSLPAIQPRLVAVSKTKPAEMVIEAYNLGQR 62
Query: 85 CFGENYVQEIVEKAAQ------LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
FGENYVQE++EKA+ P D++WHFIG+LQ N V L+ GVPNL M+E+VD+ K
Sbjct: 63 SFGENYVQELLEKASDSRILSSCP-DIKWHFIGHLQKNNVNKLI-GVPNLFMLETVDSLK 120
Query: 139 IAGRLNRMVETMG-RKPLKVLVQVNTSGEE 167
+A R+N + G + LK++VQ+NTSGE+
Sbjct: 121 LADRVNASWQKKGCSEKLKIMVQINTSGED 150
>gi|390363087|ref|XP_003730293.1| PREDICTED: LOW QUALITY PROTEIN: proline synthase co-transcribed
bacterial homolog protein-like [Strongylocentrotus
purpuratus]
Length = 270
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 97/144 (67%), Gaps = 9/144 (6%)
Query: 31 ATDGVAATALRSVIQRVHQAA--ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGE 88
AT+ A AL SV +R+ A+ + S+ P R+VAVSKTKPVS+I Q Y+ G R FGE
Sbjct: 7 ATENSVAKALSSVRERIQAASLQKASTIPSVEPRLVAVSKTKPVSMILQAYQTGQRNFGE 66
Query: 89 NYVQEIVEKA-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL 143
NYVQE+V+KA + D+ WH+IG+LQSNKVK LL+ PNL MVE+VD++K+A L
Sbjct: 67 NYVQELVDKAHDDLIREQCADIRWHYIGHLQSNKVKKLLSS-PNLYMVETVDSKKLASEL 125
Query: 144 NR-MVETMGRKPLKVLVQVNTSGE 166
+ + R L+V VQ+NTSGE
Sbjct: 126 EKHWSKETDRGKLRVYVQLNTSGE 149
>gi|340508347|gb|EGR34066.1| hypothetical protein IMG5_024860 [Ichthyophthirius multifiliis]
Length = 230
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 97/139 (69%), Gaps = 6/139 (4%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
D + AL++V + +++ ++ + R +V VSKTKPV ++++ Y++G R FGENYV
Sbjct: 2 DSSISNALKTVQENINEVLNKNQKTT-RCTLVGVSKTKPVQLLQEAYDSGLRHFGENYVD 60
Query: 93 EIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
EI EKA QLP D++WHFIG+LQSNK+K +L VPNL ++E++D+ K+A ++ ++ + R
Sbjct: 61 EISEKAPQLPQDIKWHFIGHLQSNKIKQVL--VPNLYIIETIDSIKLAEKVQKICQNQNR 118
Query: 153 KPLKVLVQVNTSGEE--YG 169
LKVL+Q+ S EE YG
Sbjct: 119 N-LKVLIQIKISDEESKYG 136
>gi|320163280|gb|EFW40179.1| alanine racemase [Capsaspora owczarzaki ATCC 30864]
Length = 280
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
D +R+VAVSKTKP ++++ Y AG R FGENYVQE+V KA+ LP D++WHFIG+LQSNK
Sbjct: 64 DAVRLVAVSKTKPNALLQAAYGAGQRHFGENYVQELVAKASGLPRDIQWHFIGHLQSNKA 123
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGE 166
+A +PNL +VE+VD+ K+A L + R PL+V VQVNTSGE
Sbjct: 124 SH-VAAIPNLFVVETVDSVKLATALEKACAKQTRDSPLRVFVQVNTSGE 171
>gi|321261900|ref|XP_003195669.1| hypothetical protein CGB_H2200W [Cryptococcus gattii WM276]
gi|317462143|gb|ADV23882.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 264
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 5/121 (4%)
Query: 47 VHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLE 106
V AA ++P R+VAVSK KP S I+ +Y+AGHR FGENY+QE+V+KAA LP+D++
Sbjct: 28 VAHAAGAGAKP----RLVAVSKLKPASDIKALYDAGHRHFGENYIQEMVDKAAVLPEDIK 83
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
WHFIG+LQSNK K L A VPNL ++E++ + K+A L + + L V +QVNTSGE
Sbjct: 84 WHFIGSLQSNKSK-LAASVPNLFILETLSSIKVADLLQKSLPPSRTSKLNVYLQVNTSGE 142
Query: 167 E 167
+
Sbjct: 143 D 143
>gi|209736652|gb|ACI69195.1| Proline synthetase co-transcribed bacterial homolog protein [Salmo
salar]
Length = 282
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%), Gaps = 17/142 (11%)
Query: 39 ALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AL +V+ +V+QAA R + PP R+VAVSKTKP ++ + Y GHR FGENYV E
Sbjct: 13 ALHAVVDKVNQAAARRPKTLPAVPP---RLVAVSKTKPPDMVIEAYRKGHRNFGENYVNE 69
Query: 94 IVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN---R 145
+V+KA+ L ++EWHFIG+LQ N V LL GVPNL MVE+VD+ K+A ++N +
Sbjct: 70 LVDKASNLQILESCPEIEWHFIGHLQKNNVNKLL-GVPNLFMVETVDSAKLADKVNSSWQ 128
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
+ + LK++VQ+NTSGEE
Sbjct: 129 RLRAASTQTLKIMVQINTSGEE 150
>gi|213510984|ref|NP_001135276.1| proline synthase co-transcribed bacterial homolog protein [Salmo
salar]
gi|209155828|gb|ACI34146.1| Proline synthetase co-transcribed bacterial homolog protein [Salmo
salar]
Length = 282
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 96/143 (67%), Gaps = 19/143 (13%)
Query: 39 ALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AL++V+ RV+QAA R + PP R+VAVSKTKP ++ + Y GHR FGENYV E
Sbjct: 13 ALQAVVDRVNQAAARRPKTLPVVPP---RLVAVSKTKPPDMVIEAYRKGHRNFGENYVNE 69
Query: 94 IVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM- 146
+V+KA+ P ++EWHFIG+LQ N V LL GVPNL MVE+VD+ K+A ++N
Sbjct: 70 LVDKASN-PQILESCPEIEWHFIGHLQKNNVNKLL-GVPNLFMVETVDSVKLADKVNSSW 127
Query: 147 --VETMGRKPLKVLVQVNTSGEE 167
+ T + LK++VQ+NTSGEE
Sbjct: 128 LRLRTASTQTLKIMVQINTSGEE 150
>gi|392578817|gb|EIW71944.1| hypothetical protein TREMEDRAFT_25035 [Tremella mesenterica DSM
1558]
Length = 248
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A LR I V A + ++ P + R+VA+SK KP S I+ +Y+AG+R FGENY+QE+ +
Sbjct: 9 AAELRENIGAVLNAIDSAAGPSVKPRLVAISKLKPASDIQALYDAGYRHFGENYIQELAD 68
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KAA LP D++WHF+G+LQSNK K L A +PNL +E++ + K+A L R + R L
Sbjct: 69 KAAILPKDIQWHFVGSLQSNKAK-LAASIPNLYCLETLSSIKVADLLERSISD--RPALN 125
Query: 157 VLVQVNTSGEE 167
V +QVNTSGE+
Sbjct: 126 VYLQVNTSGED 136
>gi|449540494|gb|EMD31485.1| hypothetical protein CERSUDRAFT_89014 [Ceriporiopsis subvermispora
B]
Length = 271
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 86/128 (67%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QRV QA+ S R P ++AVSK KP S I+ +YEAG R FGENY QE+ +KAA
Sbjct: 22 LAEVRQRVQQASS-SGRSP---TLIAVSKYKPASDIQALYEAGQREFGENYAQELADKAA 77
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP D++WHFIG LQSNK K LA + NLA ++++ + K A L++ + PL VL+
Sbjct: 78 VLPADIKWHFIGTLQSNKAKG-LASIENLACIQTLSSAKAATALSKALPANRPTPLNVLL 136
Query: 160 QVNTSGEE 167
QVNTSGE+
Sbjct: 137 QVNTSGED 144
>gi|225703686|gb|ACO07689.1| Proline synthetase co-transcribed bacterial homolog protein
[Oncorhynchus mykiss]
Length = 282
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 95/143 (66%), Gaps = 19/143 (13%)
Query: 39 ALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AL +V+ RV+QAA R + PP R+VAVSKTKP ++ + Y GHR FGENYV E
Sbjct: 13 ALHAVVDRVNQAAARRPKTLPAVPP---RLVAVSKTKPPDMVIEAYRKGHRNFGENYVNE 69
Query: 94 IVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--- 144
+V+KA+ P ++EWHFIG+LQ N V LL GVPNL MVE+VD+ K+A ++N
Sbjct: 70 LVDKASN-PQILESCPEIEWHFIGHLQKNNVNKLL-GVPNLFMVETVDSAKLADKVNSSW 127
Query: 145 RMVETMGRKPLKVLVQVNTSGEE 167
+ + + LK++VQ+NTSGEE
Sbjct: 128 QRLRAASTQKLKIMVQINTSGEE 150
>gi|300121038|emb|CBK21420.2| unnamed protein product [Blastocystis hominis]
Length = 618
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/137 (45%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T ++ +RV + +++ ++ RI VAVSK KP I+++Y+ GHR FGENYVQE+++K
Sbjct: 379 TRFVALAKRVAEVSQQFNKTAPRI--VAVSKKKPAEAIQELYDYGHRDFGENYVQELLDK 436
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLK 156
A LP D+ WH IG+LQS K L+ +PNL ++ESVD+ K+A +LN R PL
Sbjct: 437 AEALPKDIRWHLIGHLQSGKCNQLIRKIPNLWVIESVDSIKLAEKLNSACLLAERADPLN 496
Query: 157 VLVQVNTSGEEYGECFI 173
V V+V+TSGEE F+
Sbjct: 497 VFVEVHTSGEETCALFV 513
>gi|253700158|ref|YP_003021347.1| alanine racemase [Geobacter sp. M21]
gi|251775008|gb|ACT17589.1| alanine racemase domain protein [Geobacter sp. M21]
Length = 230
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 4/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L + +RV QAA R+ R PD +R+VAVSKTKP + I + + G + FGENYVQE+V
Sbjct: 4 AENLGKIRERVRQAALRAGREPDAVRLVAVSKTKPAAAIEEAFACGQQIFGENYVQELVG 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
K A+LP D+ WHFIGNLQSNKV+ + V ++ SVD +A ++R +G K +
Sbjct: 64 KQAELPKDISWHFIGNLQSNKVRQITGMVD---LIHSVDRLSLATEIDRQWGALG-KVCE 119
Query: 157 VLVQVNTSGEE 167
VL+QVN S EE
Sbjct: 120 VLIQVNISQEE 130
>gi|301123513|ref|XP_002909483.1| proline synthetase co-transcribed bacterial protein [Phytophthora
infestans T30-4]
gi|262100245|gb|EEY58297.1| proline synthetase co-transcribed bacterial protein [Phytophthora
infestans T30-4]
Length = 234
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 78/105 (74%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
+VAVSKTKP+ +++ YEA R FGENY+QE+ +KA LP D++WH+IG++QSNK KPL+
Sbjct: 29 LVAVSKTKPLEDLQEAYEADQRHFGENYIQELTQKAPLLPADIKWHYIGHVQSNKAKPLV 88
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VPNL +VE+VD+ KIA LN+ + L V+VQVNTS EE
Sbjct: 89 RDVPNLFVVETVDSIKIANALNKASGEFRTEKLNVMVQVNTSEEE 133
>gi|336370406|gb|EGN98746.1| hypothetical protein SERLA73DRAFT_181371 [Serpula lacrymans var.
lacrymans S7.3]
Length = 289
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +L + RV QAA SS ++AVSK KP S + YE G R FGENYVQE+VE
Sbjct: 34 AESLAEIRTRVQQAALTSSSHSTPT-LLAVSKYKPASDVLACYEHGQRDFGENYVQELVE 92
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KA QLP D+ WHFIG LQSNK K +LA +PN+ +++V + + A LN+ + PL
Sbjct: 93 KAEQLPVDIRWHFIGTLQSNKSK-ILASIPNIYAIQTVTSARAATALNKALPIERTSPLN 151
Query: 157 VLVQVNTSGEE 167
VL+QVNTSGE+
Sbjct: 152 VLLQVNTSGED 162
>gi|218778253|ref|YP_002429571.1| alanine racemase domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218759637|gb|ACL02103.1| alanine racemase domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 233
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
D + L+ + +R+ +AAE R P IR+VAVSKTKP ++RQ AG FGENY+Q
Sbjct: 2 DNTISKNLQEIQERIQKAAEECGRDPQSIRLVAVSKTKPAEMLRQAAAAGATIFGENYIQ 61
Query: 93 EIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
E EK A+L D+EWHFIG+LQSNK K VP +++ SVD+ K+AG +++ G
Sbjct: 62 EAREKIAELESLDVEWHFIGHLQSNKAK---YAVPLFSLIHSVDSFKLAGEIDKQAAKAG 118
Query: 152 RKPLKVLVQVNTSGEE 167
K +LVQVN SGEE
Sbjct: 119 -KIQDILVQVNISGEE 133
>gi|390600701|gb|EIN10096.1| hypothetical protein PUNSTDRAFT_52184 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 269
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ +VAVSK KP S + Y G R FGENYVQE+V+KAAQLP D+ WHFIG LQSNK K
Sbjct: 40 VTLVAVSKYKPSSDVLACYNHGQRDFGENYVQELVDKAAQLPTDIRWHFIGTLQSNKAK- 98
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+LA +PNL V++V + K A L++ + PL VL+QVNTSGE+
Sbjct: 99 ILAAIPNLYAVQTVASVKAASGLDKALSNDRTAPLNVLIQVNTSGED 145
>gi|392564444|gb|EIW57622.1| hypothetical protein TRAVEDRAFT_48654 [Trametes versicolor
FP-101664 SS1]
Length = 281
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL + QRV A+ ++++P + +VAVSK KP + Y+ R FGENYVQE+V+KA
Sbjct: 21 ALTEIRQRVAAASAKAAKPTGKPVLVAVSKYKPAGDLLACYDEDQRDFGENYVQELVDKA 80
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
AQLP D+ WHFIG LQSNK K +LA +PNL +++V + K A LN+ + PL +L
Sbjct: 81 AQLPQDIRWHFIGTLQSNKAK-ILATIPNLYAIQTVTSIKAASALNKALPADRVAPLNIL 139
Query: 159 VQVNTSGEE 167
+QVNTSGE+
Sbjct: 140 LQVNTSGED 148
>gi|395332513|gb|EJF64892.1| hypothetical protein DICSQDRAFT_178448 [Dichomitus squalens
LYAD-421 SS1]
Length = 280
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 85/134 (63%), Gaps = 9/134 (6%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIR-----IVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AL + QRV A SSR R+ +VAVSK KP S + YE G R FGENYVQE
Sbjct: 17 ALAEIRQRVQAA---SSRNTSRVANHSPVLVAVSKYKPASDVLAAYEDGQRDFGENYVQE 73
Query: 94 IVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
+ +KA QLP D+ WHFIG LQSNK K +LA +PNL ++++ + K A LN+ +
Sbjct: 74 LRDKAPQLPQDIRWHFIGTLQSNKAK-ILASIPNLYAIQTLTSTKAATALNKALPEDRPS 132
Query: 154 PLKVLVQVNTSGEE 167
PL VL+QVNTSGE+
Sbjct: 133 PLNVLLQVNTSGED 146
>gi|225704980|gb|ACO08336.1| Proline synthetase co-transcribed bacterial homolog protein
[Oncorhynchus mykiss]
Length = 282
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 95/143 (66%), Gaps = 19/143 (13%)
Query: 39 ALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AL +V+ RV+QAA R + PP R+VAVSKTKP ++ + Y GHR FGENYV E
Sbjct: 13 ALHAVVDRVNQAAARRPKTLPAVPP---RLVAVSKTKPPDMVIEAYRKGHRNFGENYVNE 69
Query: 94 IVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--- 144
+V+KA+ P ++EWHFIG+LQ N V LL GVPNL MVE+VD+ K+A ++N
Sbjct: 70 LVDKASN-PQILESCPEIEWHFIGHLQKNNVNRLL-GVPNLFMVETVDSAKLADKVNSSW 127
Query: 145 RMVETMGRKPLKVLVQVNTSGEE 167
+ + + LK++VQ+NTSGEE
Sbjct: 128 QRLRAASTQKLKIMVQINTSGEE 150
>gi|389750396|gb|EIM91567.1| hypothetical protein STEHIDRAFT_165830 [Stereum hirsutum FP-91666
SS1]
Length = 281
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
+L V RV QA+ SS P R+ VAVSK KP S I YE+G R FGENYVQE+V+KA
Sbjct: 19 SLSEVRARVEQASSSSSSTPPRL--VAVSKYKPASDILACYESGQRDFGENYVQELVDKA 76
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET-MGRKPLKV 157
LP D+ WHFIG LQSNK K +LA +PN+ +++V + K A L + + + R PL +
Sbjct: 77 QMLPRDIRWHFIGTLQSNKSK-ILASIPNIYAIQTVTSIKAANALTKALSSEPSRPPLNI 135
Query: 158 LVQVNTSGEE 167
L+QVNTSGE+
Sbjct: 136 LLQVNTSGED 145
>gi|390473684|ref|XP_003734640.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein isoform 2 [Callithrix jacchus]
Length = 275
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 9/137 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALRSV +RV QA R R P + R+VAVSKTKPV ++ + Y G R FGENYVQE++E
Sbjct: 16 ALRSVNERVQQAVARRPRDLPAIQPRLVAVSKTKPVDMVIEAYGHGQRTFGENYVQELLE 75
Query: 97 KAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G
Sbjct: 76 KASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKG 134
Query: 152 RKP-LKVLVQVNTSGEE 167
LKV+VQ+NTSGEE
Sbjct: 135 SPERLKVMVQINTSGEE 151
>gi|225703472|gb|ACO07582.1| Proline synthetase co-transcribed bacterial homolog protein
[Oncorhynchus mykiss]
Length = 282
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 103/173 (59%), Gaps = 32/173 (18%)
Query: 39 ALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AL++V+ RV+QAA R + PP R+VAV KTKP ++ + Y GHR FGENYV E
Sbjct: 13 ALQAVVDRVNQAAARRPKTLPAVPP---RLVAVGKTKPPDMVIEAYRKGHRNFGENYVNE 69
Query: 94 IVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM- 146
+V++A+ P ++EWHFIG+LQ N V LL GVPNL MVE+VD+ K+A ++N
Sbjct: 70 LVDRASN-PQILESCPEIEWHFIGHLQKNNVNKLL-GVPNLFMVETVDSVKLADKVNSSW 127
Query: 147 --VETMGRKPLKVLVQVNTSGEEY------GECFI-------KCSWSHSCLLM 184
+ T + LK++VQ+NTSGEE GE KCS H LM
Sbjct: 128 LRLRTASTQTLKIMVQINTSGEESKHGLPPGETVTTVKHILSKCSALHFSGLM 180
>gi|118101365|ref|XP_424381.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Gallus gallus]
Length = 276
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 12/150 (8%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A AA +G+ ALR+V ++V QAA R + P + R+VAVSKTKP ++ Y G R
Sbjct: 4 AGMAAGEGLGP-ALRAVTEQVQQAAARRPKGLPDMQPRLVAVSKTKPAEMVLDAYSHGQR 62
Query: 85 CFGENYVQEIVEKAAQ------LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
FGENYVQE++EKA+ P +++WHFIG+LQ + V L+A VPNL M+E+VD+ K
Sbjct: 63 SFGENYVQELLEKASDSRILSSCP-EIKWHFIGHLQKSNVNKLIA-VPNLFMLETVDSVK 120
Query: 139 IAGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
+A R+N + G + LKV+VQVNTSGE+
Sbjct: 121 LADRVNSSWQKKGSPQKLKVMVQVNTSGED 150
>gi|328767687|gb|EGF77736.1| hypothetical protein BATDEDRAFT_91499 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 79/107 (73%), Gaps = 3/107 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+IR+VAVSKTKP S I YE GHR FGEN VQE+VEKA+ LP D+ WHFIG++QSNK K
Sbjct: 37 QIRLVAVSKTKPASDIAAAYELGHRHFGEN-VQELVEKASILPSDIHWHFIGSIQSNKCK 95
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
LA VPNL +E++D+ K A +N+ + + PL+V +Q+NTSGE
Sbjct: 96 A-LADVPNLWTIETIDSSKKALTMNKACQKLA-SPLRVFLQINTSGE 140
>gi|393242034|gb|EJD49553.1| hypothetical protein AURDEDRAFT_112426 [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
+VAVSK KP S I+ YE R FGENYVQE+V+KA QLPDD+ WHFIG LQSNK + L
Sbjct: 44 LVAVSKLKPASDIQGCYEHAQRDFGENYVQELVDKAPQLPDDIRWHFIGTLQSNKCRT-L 102
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
A +PNL + ++ + K A LN+ + PL VL+QVNTSGEE
Sbjct: 103 ASIPNLYAIHTLTSAKAATALNKGLPETRAAPLNVLLQVNTSGEE 147
>gi|440801337|gb|ELR22357.1| hypothetical protein ACA1_253440 [Acanthamoeba castellanii str.
Neff]
Length = 294
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 82/107 (76%), Gaps = 2/107 (1%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+VAVSKTKP +++R +EAGH FGENYVQE+V K+ QLP+ ++W FIG+LQSNK K +
Sbjct: 90 RLVAVSKTKPAALVRACFEAGHVHFGENYVQELVTKSKQLPEGIKWRFIGHLQSNKCKQV 149
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
L+ VPNL VE+VD+ K+A L++ GR PL +LVQ+NTSGEE
Sbjct: 150 LS-VPNLDCVETVDSVKLATALDKAAAAAGRTTPLSILVQINTSGEE 195
>gi|289741895|gb|ADD19695.1| proline synthetase co-transcribed protein [Glossina morsitans
morsitans]
Length = 250
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 99/149 (66%), Gaps = 17/149 (11%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
+D L+ +++R+ A E+ RP D + +VAVSKTKP+ +I Y G R FG
Sbjct: 2 SDIDVKAGLQQILKRIDAAYEQ--RPKDLEGGKPFLVAVSKTKPIEMIIDAYSVGQRHFG 59
Query: 88 ENYVQEIVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAG 141
ENYVQE+V+K +Q PD D++WHFIG+LQ+NKV +L +PN+ ++++VD EK+A
Sbjct: 60 ENYVQELVDK-SQHPDILQKCPDIKWHFIGHLQNNKVNKILK-LPNIHLIQTVDTEKLAD 117
Query: 142 RLN---RMVETMGRKPLKVLVQVNTSGEE 167
LN R +E ++PL+VL+Q+NTSGE+
Sbjct: 118 NLNNSWRKLEIDNKQPLRVLIQINTSGED 146
>gi|403294362|ref|XP_003938159.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Saimiri boliviensis boliviensis]
Length = 275
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKPV ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPVDMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ + +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSMCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LKV+VQ+NTSGEE
Sbjct: 123 ADKVNSSWQKKGSPERLKVMVQINTSGEE 151
>gi|197119080|ref|YP_002139507.1| pyridoxal phosphate-dependent enzyme, class III [Geobacter
bemidjiensis Bem]
gi|197088440|gb|ACH39711.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
bemidjiensis Bem]
Length = 230
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 4/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L + +R+ QAA R+ R PD +R+VAVSKTKP + I + + G + FGENYVQE+V
Sbjct: 4 AENLGKIRERIRQAALRAGREPDAVRLVAVSKTKPAAAIEEAFACGQQIFGENYVQELVG 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
K +LP ++ WHFIGNLQSNKV+ +AG+ +L + SVD +A ++R +G K +
Sbjct: 64 KKGELPPEISWHFIGNLQSNKVRQ-IAGMVDL--IHSVDRLSLAAEIDRQWGALG-KVCE 119
Query: 157 VLVQVNTSGEE 167
VL+QVN S EE
Sbjct: 120 VLIQVNISQEE 130
>gi|74144222|dbj|BAE22181.1| unnamed protein product [Mus musculus]
Length = 326
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 9/137 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++E
Sbjct: 10 ALRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLE 69
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G
Sbjct: 70 KASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKG 128
Query: 152 -RKPLKVLVQVNTSGEE 167
+PLKV+VQ+NTSGE+
Sbjct: 129 PTEPLKVMVQINTSGED 145
>gi|403411941|emb|CCL98641.1| predicted protein [Fibroporia radiculosa]
Length = 273
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
+L V RV QA S + + I +VAVSK KP S + +EAG FGENYVQE+V+KA
Sbjct: 20 SLTEVRTRVQQAI--SGKNKEAI-LVAVSKYKPASDVLACFEAGQLDFGENYVQELVDKA 76
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
QLP + WHFIG LQSNK K +LA +PNL +++V + K+A LN+ + PL +L
Sbjct: 77 QQLPPSIRWHFIGTLQSNKAK-VLASIPNLYTIQTVTSVKVAAALNKAIPAERSSPLNIL 135
Query: 159 VQVNTSGEE 167
+QVNTSGE+
Sbjct: 136 LQVNTSGED 144
>gi|164657386|ref|XP_001729819.1| hypothetical protein MGL_2805 [Malassezia globosa CBS 7966]
gi|159103713|gb|EDP42605.1| hypothetical protein MGL_2805 [Malassezia globosa CBS 7966]
Length = 768
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 80/115 (69%), Gaps = 7/115 (6%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSN 116
P + R++ VSK +P S + Y+ G R FGENYVQE++EKA LPDD++WHFIG LQSN
Sbjct: 268 PKKPRLLVVSKLQPPSALMAAYDRTGQRHFGENYVQELIEKARVLPDDIQWHFIGGLQSN 327
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMV-----ETMGRKPLKVLVQVNTSGE 166
K K LLA VPNL V+SVD+EK+A L + + ++ + PL V +QVNTSGE
Sbjct: 328 KAK-LLAAVPNLYAVQSVDSEKLALGLEKTLAKPEHASLRKAPLYVYIQVNTSGE 381
>gi|84872182|ref|NP_001034166.1| proline synthase co-transcribed bacterial homolog protein isoform b
[Mus musculus]
gi|38174599|gb|AAH61045.1| Proline synthetase co-transcribed [Mus musculus]
gi|74188637|dbj|BAE28062.1| unnamed protein product [Mus musculus]
Length = 153
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 9/137 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++E
Sbjct: 16 ALRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLE 75
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G
Sbjct: 76 KASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKG 134
Query: 152 -RKPLKVLVQVNTSGEE 167
+PLKV+VQ+NTSGE+
Sbjct: 135 PTEPLKVMVQINTSGED 151
>gi|332825856|ref|XP_001169823.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein isoform 1 [Pan troglodytes]
gi|397521407|ref|XP_003830788.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Pan paniscus]
Length = 310
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 39 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGYGQR 98
Query: 85 CFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 99 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 157
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 158 ADKVNSSWQKKGSPERLKVMVQINTSGEE 186
>gi|410208928|gb|JAA01683.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410255812|gb|JAA15873.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410290778|gb|JAA23989.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410290780|gb|JAA23990.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
gi|410350821|gb|JAA42014.1| proline synthetase co-transcribed homolog (bacterial) [Pan
troglodytes]
Length = 275
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGYGQR 63
Query: 85 CFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 123 ADKVNSSWQKKGSPERLKVMVQINTSGEE 151
>gi|16930823|ref|NP_473398.1| proline synthase co-transcribed bacterial homolog protein isoform a
[Mus musculus]
gi|12230502|sp|Q9Z2Y8.1|PROSC_MOUSE RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|4126980|dbj|BAA36843.1| Proline synthetase associated [Mus musculus]
gi|26328127|dbj|BAC27804.1| unnamed protein product [Mus musculus]
gi|148700851|gb|EDL32798.1| proline synthetase co-transcribed [Mus musculus]
Length = 274
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 9/137 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++E
Sbjct: 16 ALRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLE 75
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G
Sbjct: 76 KASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKG 134
Query: 152 -RKPLKVLVQVNTSGEE 167
+PLKV+VQ+NTSGE+
Sbjct: 135 PTEPLKVMVQINTSGED 151
>gi|426359342|ref|XP_004046935.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Gorilla gorilla gorilla]
Length = 310
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 39 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 98
Query: 85 CFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 99 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 157
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LKV+VQ+NTSGEE
Sbjct: 158 ADKVNSSWQKKGSPERLKVMVQINTSGEE 186
>gi|355697864|gb|EHH28412.1| Proline synthase co-transcribed bacterial-like protein [Macaca
mulatta]
gi|355779627|gb|EHH64103.1| Proline synthase co-transcribed bacterial-like protein [Macaca
fascicularis]
gi|380788997|gb|AFE66374.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
Length = 275
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 123 ADKVNSSWQKKGSPERLKVMVQINTSGEE 151
>gi|383415499|gb|AFH30963.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
gi|383415501|gb|AFH30964.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
gi|384939912|gb|AFI33561.1| proline synthase co-transcribed bacterial homolog protein [Macaca
mulatta]
Length = 275
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSLKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 123 ADKVNSSWQKKGSPERLKVMVQINTSGEE 151
>gi|354472073|ref|XP_003498265.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Cricetulus griseus]
Length = 275
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 97/150 (64%), Gaps = 11/150 (7%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S +T+ ALR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSTELGLGFALRAVNERVQQSVSRRRRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
FGENYVQE++EKA+ P +++WHFIG+LQ V L+A VPNL M+E+VD+ K
Sbjct: 64 TFGENYVQELLEKASN-PKVLSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMK 121
Query: 139 IAGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
+A ++N + G LKV+VQ+NTSGEE
Sbjct: 122 LADKVNSSWQKKGSTERLKVMVQINTSGEE 151
>gi|402877995|ref|XP_003902692.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Papio anubis]
Length = 310
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 39 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 98
Query: 85 CFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 99 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 157
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LKV+VQ+NTSGEE
Sbjct: 158 ADKVNSSWQKKGSPERLKVMVQINTSGEE 186
>gi|332308055|ref|YP_004435906.1| alanine racemase domain-containing protein [Glaciecola sp.
4H-3-7+YE-5]
gi|410639921|ref|ZP_11350466.1| hypothetical protein GCHA_0690 [Glaciecola chathamensis S18K6]
gi|332175384|gb|AEE24638.1| alanine racemase domain protein [Glaciecola sp. 4H-3-7+YE-5]
gi|410140802|dbj|GAC08653.1| hypothetical protein GCHA_0690 [Glaciecola chathamensis S18K6]
Length = 227
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 7/135 (5%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G A L+ ++ + Q+ ++RP + ++++AV+KTKPVS I Q YEAGHR FGENYVQE
Sbjct: 2 GTIAERLKIALKTITQSVCEANRPANSVKLLAVTKTKPVSDIVQAYEAGHRLFGENYVQE 61
Query: 94 IVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
V+K QL DD+EWHFIG LQSNK +P+ N V S+D KIA RLN +
Sbjct: 62 GVDKIHQLSELDDIEWHFIGPLQSNKTRPV---AENFDWVHSIDRLKIAQRLND--QRSA 116
Query: 152 RKPLKVLVQVNTSGE 166
K L V +QVN E
Sbjct: 117 HKKLNVCIQVNIDNE 131
>gi|348554241|ref|XP_003462934.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 1 [Cavia porcellus]
Length = 153
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 97/151 (64%), Gaps = 13/151 (8%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAG 82
A S + + ALR+V +RV QA R RP D + R+VAVSKTKP ++ + Y G
Sbjct: 4 AGSMSAELGIGFALRTVNERVQQAVAR--RPQDLPAIQPRLVAVSKTKPAELVIEAYSHG 61
Query: 83 HRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNE 137
R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+
Sbjct: 62 QRTFGENYVQELLEKASNPKVLSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSV 120
Query: 138 KIAGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
K+A R+N + G + LKV+VQ+NTSGEE
Sbjct: 121 KLADRVNNSWQKKGSPEKLKVMVQINTSGEE 151
>gi|345305932|ref|XP_001513258.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Ornithorhynchus anatinus]
Length = 274
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 94/139 (67%), Gaps = 13/139 (9%)
Query: 39 ALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
ALR+V +RV QAA R RP D + R+VAVSKTKP ++ + Y G R FGENYVQE+
Sbjct: 16 ALRAVTERVQQAAAR--RPQDLPAVQPRLVAVSKTKPADMVIEAYIHGQRSFGENYVQEL 73
Query: 95 VEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
+EKA+ +++WHFIG+LQ + V L+ VPNL M+E+VD+ K+A R+N +
Sbjct: 74 LEKASNAKILSSCPEIKWHFIGHLQKHNVNKLIT-VPNLFMLETVDSVKLADRVNSSWQK 132
Query: 150 MGR-KPLKVLVQVNTSGEE 167
G + LKV+VQVNTSGEE
Sbjct: 133 KGSPERLKVMVQVNTSGEE 151
>gi|334312588|ref|XP_001381845.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Monodelphis domestica]
Length = 275
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
AA + + AL +V +RV Q+A R SR P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AAGMSAELGVGLALLAVKERVQQSAARRSRDLPAIQPRLVAVSKTKPADMVIEAYAHGQR 63
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 SFGENYVQELLEKASNTKILSSCPEIKWHFIGHLQKQNVNKLIA-VPNLYMLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 123 ADKVNNSWQKRGSSERLKVMVQINTSGEE 151
>gi|119583765|gb|EAW63361.1| proline synthetase co-transcribed homolog (bacterial), isoform
CRA_b [Homo sapiens]
gi|119583768|gb|EAW63364.1| proline synthetase co-transcribed homolog (bacterial), isoform
CRA_b [Homo sapiens]
Length = 310
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 39 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 98
Query: 85 CFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 99 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 157
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LKV+VQ+NTSGEE
Sbjct: 158 ADKVNSSWQRKGSPERLKVMVQINTSGEE 186
>gi|6005842|ref|NP_009129.1| proline synthase co-transcribed bacterial homolog protein [Homo
sapiens]
gi|12230426|sp|O94903.1|PROSC_HUMAN RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|4126978|dbj|BAA36842.1| Proline synthetase associated [Homo sapiens]
gi|12052758|emb|CAB66551.1| hypothetical protein [Homo sapiens]
gi|15147391|gb|AAH12334.1| Proline synthetase co-transcribed homolog (bacterial) [Homo
sapiens]
gi|49065490|emb|CAG38563.1| PROSC [Homo sapiens]
gi|190689559|gb|ACE86554.1| proline synthetase co-transcribed homolog (bacterial) protein
[synthetic construct]
gi|190690923|gb|ACE87236.1| proline synthetase co-transcribed homolog (bacterial) protein
[synthetic construct]
Length = 275
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 123 ADKVNSSWQRKGSPERLKVMVQINTSGEE 151
>gi|326436868|gb|EGD82438.1| alanine racemase [Salpingoeca sp. ATCC 50818]
Length = 298
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 79/108 (73%), Gaps = 4/108 (3%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA--AQLPDDLEWHFIGNLQSNKVK 119
R+VAVSKTKP+ ++ YEAG R FGENYVQE+VEK+ ++P+D+EWHFIG LQSNK
Sbjct: 86 RLVAVSKTKPLQLVLDAYEAGQRVFGENYVQELVEKSNDPRVPEDIEWHFIGRLQSNKSN 145
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
LA V NL +VE+V +EK+A LNR PL+V +QVNTSGEE
Sbjct: 146 -TLARVKNLKVVETVASEKLARTLNRAFAEHD-APLRVFMQVNTSGEE 191
>gi|297299225|ref|XP_001089087.2| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Macaca mulatta]
Length = 310
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 39 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 98
Query: 85 CFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 99 TFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSLKL 157
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LKV+VQ+NTSGEE
Sbjct: 158 ADKVNSSWQKKGSPERLKVMVQINTSGEE 186
>gi|170090438|ref|XP_001876441.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647934|gb|EDR12177.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 270
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDL 105
R A SS P +VAVSK KP S I YEAG FGENYVQE+ EKA LP D+
Sbjct: 22 RARVQAASSSSPGHTPTLVAVSKIKPASDILACYEAGQLDFGENYVQELEEKARVLPADI 81
Query: 106 EWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSG 165
WHFIG LQSNK K LA +PNL V+++++ K A LN+ + + PL+V +QVNTSG
Sbjct: 82 RWHFIGTLQSNKAKT-LASIPNLHAVQTLNSTKAASALNKALPSDRPYPLRVFIQVNTSG 140
Query: 166 E 166
E
Sbjct: 141 E 141
>gi|149742615|ref|XP_001492309.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Equus caballus]
Length = 275
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 97/149 (65%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGFALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQR 63
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKL 122
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LK++VQ+NTSGEE
Sbjct: 123 ADKVNSSWQKKGSPERLKIMVQINTSGEE 151
>gi|145507578|ref|XP_001439744.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406939|emb|CAK72347.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 38 TALRSVIQRVHQAAERSSRPPDR-IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
T L+ +Q+V Q ++S ++ + +VAVSKTKPV +I++ YE G + FGENYV E++E
Sbjct: 3 TLLQQNLQKVLQTIVKASETTNKQVTLVAVSKTKPVELIKEAYEGGQKHFGENYVNELIE 62
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KA LP+D+ WHFIG+LQ+NKV ++ + NL ++SVD+ K+A ++ + E +GR +
Sbjct: 63 KAPLLPNDISWHFIGHLQTNKVSTIMK-IQNLEFIQSVDSLKLAQKIEKHCEKLGRN-IN 120
Query: 157 VLVQVNTSGEE 167
+ VQ+ S EE
Sbjct: 121 IFVQIKLSEEE 131
>gi|351699789|gb|EHB02708.1| Proline synthetase co-transcribed bacterial-like protein
[Heterocephalus glaber]
Length = 275
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 98/151 (64%), Gaps = 13/151 (8%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAG 82
A+S + D ALR+V +RV QA R RP D + R+VAVSKTKPV ++ + Y G
Sbjct: 4 ASSMSADLGIGLALRAVNERVQQAVAR--RPQDLPAIQPRLVAVSKTKPVEMVIEAYNHG 61
Query: 83 HRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNE 137
R FGENYVQE++EKA+ D++WHFIG+LQ V L+A VPNL+++E+V +
Sbjct: 62 QRTFGENYVQELLEKASNPKILSSCPDIKWHFIGHLQKQNVNKLMA-VPNLSVLETVSSV 120
Query: 138 KIAGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
K+A R+N + G LKV+VQVNTSGE+
Sbjct: 121 KLAERVNSSWQKKGSPERLKVMVQVNTSGED 151
>gi|442609134|ref|ZP_21023875.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial homolog PROSC [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
gi|441749746|emb|CCQ09937.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial homolog PROSC [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
Length = 227
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 86/131 (65%), Gaps = 9/131 (6%)
Query: 37 ATALRSVIQRVHQAAERSS-RPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
A L S QR+ +AAE+S R P +R++AVSKTKP+++I+ Y+ G RCFGE+YVQE +
Sbjct: 5 AERLNSAYQRLQEAAEKSPYRHP--VRLLAVSKTKPITLIQHAYDCGQRCFGESYVQEAI 62
Query: 96 EKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
EK + DLEWHFIG +QSNK +P+ + V SVD EKIA RLN G
Sbjct: 63 EKVQYFANTPDLEWHFIGPIQSNKSRPI---AEHFHWVHSVDREKIAKRLNEQ-RPKGMP 118
Query: 154 PLKVLVQVNTS 164
PL+VL+QVN S
Sbjct: 119 PLQVLIQVNIS 129
>gi|410620111|ref|ZP_11330993.1| hypothetical protein GPLA_4252 [Glaciecola polaris LMG 21857]
gi|410160206|dbj|GAC35131.1| hypothetical protein GPLA_4252 [Glaciecola polaris LMG 21857]
Length = 227
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 86/135 (63%), Gaps = 7/135 (5%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G A L+ ++ + Q+A ++RP + ++++AV+KTKPVS I Q YEAGHR FGENYVQE
Sbjct: 2 GTIAERLKIALKTIEQSACEANRPANSVKLLAVTKTKPVSDIVQAYEAGHRLFGENYVQE 61
Query: 94 IVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
V+K QL +D+EWHFIG LQSNK +P+ N V S+D KIA RLN +
Sbjct: 62 GVDKIQQLKALNDIEWHFIGPLQSNKTRPV---AENFDWVHSIDRLKIAQRLND--QRSA 116
Query: 152 RKPLKVLVQVNTSGE 166
K L + +QVN E
Sbjct: 117 HKRLNICIQVNIDNE 131
>gi|395507452|ref|XP_003758038.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Sarcophilus harrisii]
Length = 330
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
AA + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 59 AAGMSAELGVGLALRAVKERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYAYGQR 118
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ + V L+A VPNL M+E+VD+ K+
Sbjct: 119 SFGENYVQELLEKASNTKILSSCPEIKWHFIGHLQKHNVNKLIA-VPNLYMLETVDSVKL 177
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 178 ADKVNNSWQKKGSPERLKVMVQINTSGEE 206
>gi|311272381|ref|XP_003133417.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 2 [Sus scrofa]
Length = 275
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGIGFALRAVNERVQQAVARRPRELPAIQPRLVAVSKTKPADMVIEAYNHGQR 63
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 IFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKL 122
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + G + LKV+VQVNTSGEE
Sbjct: 123 ADKVNSSWQKKGSPERLKVMVQVNTSGEE 151
>gi|385303919|gb|EIF47963.1| single-domain racemase possibly non-specific due to the lack of the
second domain [Dekkera bruxellensis AWRI1499]
Length = 240
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+ R+V VSK KP S I+ +Y+AG+R FGENYVQE+ EKA LP D+ WHFIG LQ+NK K
Sbjct: 31 KARLVCVSKLKPASDIQALYDAGYRHFGENYVQELTEKAKTLPKDINWHFIGGLQTNKTK 90
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
L + NL VE++D EK A +LN + + + V +QVNTS EE
Sbjct: 91 DLAKHIDNLYAVETIDTEKKARKLNSTRINVDKPKINVFIQVNTSEEE 138
>gi|432099971|gb|ELK28865.1| Proline synthase co-transcribed bacterial like protein [Myotis
davidii]
Length = 269
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 91/139 (65%), Gaps = 9/139 (6%)
Query: 37 ATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
A ALR+V +RV QA R R P R+VAVSKTKP ++ + Y G R FGENYVQE+
Sbjct: 8 AFALRTVNERVQQAVARRPRDLPAIEPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQEL 67
Query: 95 VEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
+EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N +
Sbjct: 68 LEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQK 126
Query: 150 MGRKP-LKVLVQVNTSGEE 167
G LKV+VQ+NTSGEE
Sbjct: 127 KGSPERLKVMVQINTSGEE 145
>gi|197101691|ref|NP_001126869.1| proline synthase co-transcribed bacterial homolog protein [Pongo
abelii]
gi|75041031|sp|Q5R4Z1.1|PROSC_PONAB RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|55732977|emb|CAH93175.1| hypothetical protein [Pongo abelii]
Length = 275
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL ++E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
AG++N + G LKV+VQ+NTSGEE
Sbjct: 123 AGKVNSSWQKKGSPERLKVMVQINTSGEE 151
>gi|410956410|ref|XP_003984835.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Felis catus]
Length = 275
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 91/137 (66%), Gaps = 9/137 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++E
Sbjct: 16 ALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLE 75
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G
Sbjct: 76 KASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQKKG 134
Query: 152 RKP-LKVLVQVNTSGEE 167
LKV+VQVNTSGEE
Sbjct: 135 SPERLKVMVQVNTSGEE 151
>gi|410625291|ref|ZP_11336077.1| hypothetical protein GMES_0540 [Glaciecola mesophila KMM 241]
gi|410155095|dbj|GAC22846.1| hypothetical protein GMES_0540 [Glaciecola mesophila KMM 241]
Length = 227
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 7/135 (5%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G A L+ ++ + Q+ ++RP + ++++AV+KTKPVS I Q YEAGHR FGENYVQE
Sbjct: 2 GTIAERLKIALKTITQSVCDANRPANSVKLLAVTKTKPVSDIVQAYEAGHRLFGENYVQE 61
Query: 94 IVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
V+K QL + D+EWHFIG LQSNK +P+ N V S+D KIA RLN +
Sbjct: 62 GVDKIQQLSEFSDIEWHFIGPLQSNKTRPV---AENFHWVHSIDRLKIAQRLND--QRSA 116
Query: 152 RKPLKVLVQVNTSGE 166
K L V +QVN E
Sbjct: 117 HKTLNVCIQVNVDNE 131
>gi|50549285|ref|XP_502113.1| YALI0C21934p [Yarrowia lipolytica]
gi|49647980|emb|CAG82433.1| YALI0C21934p [Yarrowia lipolytica CLIB122]
Length = 239
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+V VSK KP S I+ VY+ G R FGENYVQE++EK A LP +++WHFIG+LQSNK L
Sbjct: 26 RLVCVSKYKPASDIQAVYDLGQRHFGENYVQELMEKVANLPQEIQWHFIGSLQSNKCAQL 85
Query: 122 LAGVPNLAMVESVDNEKIAGRLN---RMVETMGRKPLKVLVQVNTSGE 166
+PNL VE+VD EK A +LN E + P+ V VQVNTSGE
Sbjct: 86 AKNIPNL-WVETVDGEKKAKKLNDAREQSEYKDKAPVHVFVQVNTSGE 132
>gi|332241070|ref|XP_003269712.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Nomascus leucogenys]
Length = 242
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 13/151 (8%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAG 82
A S + + ALR+V +RV QA R RP D + R+VAVSKTKP ++ + Y G
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVAR--RPQDLPSIQPRLVAVSKTKPADMVIEAYGHG 61
Query: 83 HRCFGENYVQEIVEKAAQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNE 137
R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+
Sbjct: 62 QRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSV 120
Query: 138 KIAGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
K+A ++N + G + LKV++Q+NTSGEE
Sbjct: 121 KLADKVNSSWQKKGSLERLKVMIQINTSGEE 151
>gi|410930996|ref|XP_003978883.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Takifugu rubripes]
Length = 290
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 96/142 (67%), Gaps = 13/142 (9%)
Query: 37 ATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
AL+SV++R++QAA R + P R+VAVSKTKP ++ + Y G R FGENYV E+
Sbjct: 11 GNALKSVMERINQAAARRQKALPAVLPRLVAVSKTKPPDLVVEAYRQGQRNFGENYVNEL 70
Query: 95 VEKAAQLP------DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
+EKA+ P +++WHFIG+LQ N V LL GVPNL +VE+VD+ K+A ++N +
Sbjct: 71 LEKASD-PLILGSCPEIKWHFIGHLQKNNVNKLL-GVPNLHLVETVDSVKLADKVNSSWQ 128
Query: 149 TM-GRKP--LKVLVQVNTSGEE 167
+ G P LKV+VQVNTSGE+
Sbjct: 129 RIRGASPQRLKVMVQVNTSGEQ 150
>gi|57097863|ref|XP_539969.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Canis lupus familiaris]
Length = 275
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKPV ++ + Y G R
Sbjct: 4 AGSMSAELGVGFALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPVEMVIEAYCHGQR 63
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQVNTSGE+
Sbjct: 123 ADKVNSSWQKKGSPERLKVMVQVNTSGEQ 151
>gi|88859059|ref|ZP_01133700.1| hypothetical protein PTD2_08644 [Pseudoalteromonas tunicata D2]
gi|88819285|gb|EAR29099.1| hypothetical protein PTD2_08644 [Pseudoalteromonas tunicata D2]
Length = 244
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ QA + +P + ++AVSKTKP +I Y AGHR FGE+YVQE VEK
Sbjct: 19 LNSAYARIAQAEKNHQKPAKSVSLLAVSKTKPAQLIIDAYHAGHRKFGESYVQEAVEKIQ 78
Query: 100 QLP-DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
Q+P +D+EWHFIG +QSNK K A + + V+S++ KIA RLN+ T PL VL
Sbjct: 79 QIPFNDIEWHFIGPIQSNKTK---AIAEHFSWVQSIERPKIAERLNQQRPT-NLPPLNVL 134
Query: 159 VQVNTSGEE 167
+QVN SGE+
Sbjct: 135 IQVNISGEQ 143
>gi|336383194|gb|EGO24343.1| hypothetical protein SERLADRAFT_337532 [Serpula lacrymans var.
lacrymans S7.9]
Length = 231
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
++AVSK KP S + YE G R FGENYVQE+VEKA QLP D+ WHFIG LQSNK K +L
Sbjct: 2 LLAVSKYKPASDVLACYEHGQRDFGENYVQELVEKAEQLPVDIRWHFIGTLQSNKSK-IL 60
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
A +PN+ +++V + + A LN+ + PL VL+QVNTSGE+
Sbjct: 61 ASIPNIYAIQTVTSARAATALNKALPIERTSPLNVLLQVNTSGED 105
>gi|77735663|ref|NP_001029529.1| proline synthase co-transcribed bacterial homolog protein [Bos
taurus]
gi|115311845|sp|Q3T0G5.1|PROSC_BOVIN RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|74267697|gb|AAI02406.1| Proline synthetase co-transcribed homolog (bacterial) [Bos taurus]
gi|296472322|tpg|DAA14437.1| TPA: proline synthetase co-transcribed bacterial homolog protein
[Bos taurus]
Length = 273
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 11/149 (7%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGIGFALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQR 63
Query: 85 CFGENYVQEIVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEK 138
FGENYVQE++EKA+ P +++WHFIG+LQ V L+A VPNL+M+E+VD+ K
Sbjct: 64 TFGENYVQELLEKASN-PQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVK 121
Query: 139 IAGRLNRMVETMGRKP-LKVLVQVNTSGE 166
+A ++N + G LKV+VQ+NTSGE
Sbjct: 122 LADKVNSAWQKKGSPERLKVMVQINTSGE 150
>gi|154338034|ref|XP_001565243.1| putative alanine racemase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062290|emb|CAM36679.1| putative alanine racemase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 245
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
R+ ++ V KTK + + +Y G R FGENYVQE+ EKA +LP D WHFIG+LQSNKV+
Sbjct: 34 RVTLITVGKTKSPACLLSLYNLGQRVFGENYVQELEEKARELPGDTVWHFIGHLQSNKVR 93
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM--GRKPLKVLVQVNTSGEE 167
LL GVPNL +++++D++K+A ++N + GR L+V +QVNTSGEE
Sbjct: 94 ELLEGVPNLHVIQTIDSDKLANKVNEGCKKYRSGRS-LEVYIQVNTSGEE 142
>gi|190346825|gb|EDK39002.2| hypothetical protein PGUG_03100 [Meyerozyma guilliermondii ATCC
6260]
Length = 256
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 5/135 (3%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
+A ++ QRV + +SR +R+VAVSK KP S I +Y G R FGENYVQE++ K
Sbjct: 25 SAYEAISQRVSTTS--NSR---NVRLVAVSKLKPASDILALYNHGVRHFGENYVQELIGK 79
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
A +LP D++WHFIG LQ+ K K L G+ NL VE++D+ K +L+ + PL V
Sbjct: 80 AQELPKDIKWHFIGGLQTGKCKDLAKGIDNLYAVETIDSLKKCKKLDTARLNAEKDPLNV 139
Query: 158 LVQVNTSGEEYGECF 172
+Q+NTSGEE F
Sbjct: 140 YLQINTSGEEQKSGF 154
>gi|427787261|gb|JAA59082.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 247
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 87/134 (64%), Gaps = 8/134 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL+ V +++ A+ + P R+ VAVSKTKP ++ Y G R FGENY+QE+VEKA
Sbjct: 13 ALQLVREKIAAASAGLTGPTPRL--VAVSKTKPKELVITAYNEGQRHFGENYIQELVEKA 70
Query: 99 AQ---LPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
L D D++WHFIG LQSNKV P +PNL MVE+++++K A LN GR
Sbjct: 71 NSAEILRDCPDIKWHFIGRLQSNKV-PKFPKIPNLFMVETLESQKTAHALNNAWAASGRS 129
Query: 154 PLKVLVQVNTSGEE 167
PL V+VQVNTSGEE
Sbjct: 130 PLNVMVQVNTSGEE 143
>gi|158255706|dbj|BAF83824.1| unnamed protein product [Homo sapiens]
Length = 275
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQR 63
Query: 85 CFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQ ++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQALLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
A ++N + G LKV+VQ+NTSGEE
Sbjct: 123 ADKVNSSWQRKGSPERLKVMVQINTSGEE 151
>gi|431902264|gb|ELK08765.1| Proline synthetase co-transcribed bacterial like protein [Pteropus
alecto]
Length = 269
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 92/140 (65%), Gaps = 11/140 (7%)
Query: 37 ATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
A AL +V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE+
Sbjct: 8 AFALLAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRSFGENYVQEL 67
Query: 95 VEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
+EKA+ P +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N +
Sbjct: 68 LEKASN-PKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQ 125
Query: 149 TMGRKP-LKVLVQVNTSGEE 167
G LKV+VQ+NTSGEE
Sbjct: 126 KKGSSERLKVMVQINTSGEE 145
>gi|294942693|ref|XP_002783649.1| proline synthetase associated protein, putative [Perkinsus marinus
ATCC 50983]
gi|239896151|gb|EER15445.1| proline synthetase associated protein, putative [Perkinsus marinus
ATCC 50983]
Length = 246
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 81/114 (71%), Gaps = 6/114 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
+ ++++AVSKTKP+ ++ + YE G R FGENYVQE++EKA ++P D++WH IG+LQ NK
Sbjct: 32 EEVKLLAVSKTKPMDMLMEAYEKCGQRHFGENYVQELMEKAREMPKDIQWHMIGHLQRNK 91
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLN-----RMVETMGRKPLKVLVQVNTSGE 166
V PLL VP+L VESVD+ K+A +LN M E + +PL V ++V TS E
Sbjct: 92 VAPLLKAVPHLYAVESVDSIKLADKLNAAAATAMDEGLRSEPLNVFIEVMTSDE 145
>gi|146418812|ref|XP_001485371.1| hypothetical protein PGUG_03100 [Meyerozyma guilliermondii ATCC
6260]
Length = 256
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 5/135 (3%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
+A ++ QRV + +SR +R+VAVSK KP S I +Y G R FGENYVQE++ K
Sbjct: 25 SAYEAISQRVSTTS--NSR---NVRLVAVSKLKPASDILALYNHGVRHFGENYVQELIGK 79
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
A +LP D++WHFIG LQ+ K K L G+ NL VE++D+ K +L+ + PL V
Sbjct: 80 AQELPKDIKWHFIGGLQTGKCKDLAKGIDNLYAVETIDSLKKCKKLDTARLNAEKDPLNV 139
Query: 158 LVQVNTSGEEYGECF 172
+Q+NTSGEE F
Sbjct: 140 YLQINTSGEEQKSGF 154
>gi|270013195|gb|EFA09643.1| hypothetical protein TcasGA2_TC011768 [Tribolium castaneum]
Length = 248
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 92/141 (65%), Gaps = 16/141 (11%)
Query: 39 ALRSVIQRVHQAA-----ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
LR V++R+ QA+ E +PP R+VAV+KTKPV +I Q YEAG R FGENYVQE
Sbjct: 9 GLRKVLERIEQASLKTPQELRCKPP---RLVAVTKTKPVELIVQAYEAGQRHFGENYVQE 65
Query: 94 IVEKA-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
+ EK+ + +++WHFIG+LQ+NK+ +LA PNL MVE+V ++K+A LN+
Sbjct: 66 LEEKSHHPLILEKCKEIKWHFIGHLQTNKINKVLA-TPNLYMVETVHSQKLAANLNKSWP 124
Query: 149 TMG--RKPLKVLVQVNTSGEE 167
G L V+VQ+NTS EE
Sbjct: 125 KFGPLDSKLNVMVQINTSAEE 145
>gi|417398232|gb|JAA46149.1| Putative proline synthetase co-transcribed protein [Desmodus
rotundus]
Length = 275
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 92/139 (66%), Gaps = 9/139 (6%)
Query: 37 ATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
A ALR+V +R+ QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE+
Sbjct: 14 AFALRAVNERMQQAVARRPRDLPDIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQEL 73
Query: 95 VEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
+EKA+ +++WHFIG+LQ V L+A VPNL M+E++D+ K+A ++N +
Sbjct: 74 LEKASNPKVQSSCPEIKWHFIGHLQKQNVSKLMA-VPNLFMLETLDSVKLADKVNSSWQK 132
Query: 150 MGRKP-LKVLVQVNTSGEE 167
G LKV+VQ+NTSGEE
Sbjct: 133 KGSPERLKVMVQINTSGEE 151
>gi|91090970|ref|XP_974705.1| PREDICTED: similar to proline synthetase co-transcribed
bacterial-like protein [Tribolium castaneum]
Length = 292
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 92/141 (65%), Gaps = 16/141 (11%)
Query: 39 ALRSVIQRVHQAA-----ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
LR V++R+ QA+ E +PP R+VAV+KTKPV +I Q YEAG R FGENYVQE
Sbjct: 53 GLRKVLERIEQASLKTPQELRCKPP---RLVAVTKTKPVELIVQAYEAGQRHFGENYVQE 109
Query: 94 IVEKA-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
+ EK+ + +++WHFIG+LQ+NK+ +LA PNL MVE+V ++K+A LN+
Sbjct: 110 LEEKSHHPLILEKCKEIKWHFIGHLQTNKINKVLA-TPNLYMVETVHSQKLAANLNKSWP 168
Query: 149 TMG--RKPLKVLVQVNTSGEE 167
G L V+VQ+NTS EE
Sbjct: 169 KFGPLDSKLNVMVQINTSAEE 189
>gi|303289263|ref|XP_003063919.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454235|gb|EEH51541.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 248
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 76/117 (64%), Gaps = 14/117 (11%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE-----------IVEKAAQLPDDLEWHFI 110
R+VAV KTKPV +R+ Y+AGHR FGENY QE + EK+ +P D WHFI
Sbjct: 27 RLVAVGKTKPVEQLRECYDAGHRVFGENYAQERSIHWSPYDRELTEKSPAMPPDTRWHFI 86
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGE 166
G+LQSNK K L+ VP LAM+E+VD+ K+A RL GR +PL V+ VNTSGE
Sbjct: 87 GHLQSNKAKTLVKAVPGLAMIETVDSVKLANRLADACVEAGRVEPLGVM--VNTSGE 141
>gi|367006841|ref|XP_003688151.1| hypothetical protein TPHA_0M01420 [Tetrapisispora phaffii CBS 4417]
gi|357526458|emb|CCE65717.1| hypothetical protein TPHA_0M01420 [Tetrapisispora phaffii CBS 4417]
Length = 271
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V ++ QAAE+ S ++++AVSK KP S I+ +Y+ G R FGENYVQE++EKAA LP
Sbjct: 41 VNSKIRQAAEQYSVDAKNVQLLAVSKLKPASDIKILYDHGIRHFGENYVQELIEKAASLP 100
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQ 160
+D+ WHFIG LQ+NK K L+ + NL VE+VD+ K A +LN R+ + P+ +Q
Sbjct: 101 NDISWHFIGGLQTNKCKD-LSKIKNLYAVETVDSLKKATKLNESRLKNSPEDPPINCNIQ 159
Query: 161 VNTSGEE 167
+NTS E+
Sbjct: 160 INTSNED 166
>gi|149928122|ref|ZP_01916369.1| hypothetical protein LMED105_15274 [Limnobacter sp. MED105]
gi|149823208|gb|EDM82445.1| hypothetical protein LMED105_15274 [Limnobacter sp. MED105]
Length = 237
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 86/141 (60%), Gaps = 15/141 (10%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
AT L + R+ A ++ RP ++++AVSKT P+S I + Y G FGENY+QE ++
Sbjct: 4 ATQLADIQSRIENACSKAGRPGSAVKLLAVSKTFPLSDILEFYNCGQTAFGENYLQEALD 63
Query: 97 KAAQLPD---------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRM 146
K QL D +LEWHFIG +QSNK KP+ N + V SVD KIA RL ++
Sbjct: 64 KITQLADHPNAQTINTNLEWHFIGPIQSNKTKPI---AENFSWVHSVDRLKIAQRLSDQR 120
Query: 147 VETMGRKPLKVLVQVNTSGEE 167
+ +G PL VLVQ+NTSGE+
Sbjct: 121 PDKLG--PLNVLVQINTSGED 139
>gi|395847361|ref|XP_003796347.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Otolemur garnettii]
Length = 274
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 90/136 (66%), Gaps = 9/136 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++E
Sbjct: 16 ALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLE 75
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G
Sbjct: 76 KASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSMKLADKVNSSWQKKG 134
Query: 152 RKP-LKVLVQVNTSGE 166
LKV+VQ+NTSGE
Sbjct: 135 SPERLKVMVQINTSGE 150
>gi|348540854|ref|XP_003457902.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Oreochromis niloticus]
Length = 286
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 96/145 (66%), Gaps = 19/145 (13%)
Query: 37 ATALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
A AL+SV++RV+QAA R + PP R+VAVSKTKP ++ + Y+ G R FGENYV
Sbjct: 11 AKALQSVVERVNQAAARRPKTLPAVPP---RLVAVSKTKPPEMVVEAYKQGQRNFGENYV 67
Query: 92 QEIVEKAAQLPDDLE------WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN- 144
E+V+KA+ P LE WHFIG+LQ N V LL GV NL +VE++D+ K+A R+N
Sbjct: 68 NELVDKASD-PLILESCPEIKWHFIGHLQKNNVNKLL-GVQNLFLVETIDSAKLADRVNS 125
Query: 145 --RMVETMGRKPLKVLVQVNTSGEE 167
+ + + LKV+VQ+NTSGE+
Sbjct: 126 SWQRIRGASTQRLKVMVQINTSGEQ 150
>gi|281346889|gb|EFB22473.1| hypothetical protein PANDA_005479 [Ailuropoda melanoleuca]
Length = 273
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 4 AGSMSAELGIGFALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQR 63
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 64 TFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLIA-VPNLFMLETVDSVKL 122
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + + LKV+VQVNTSGEE
Sbjct: 123 ADKVNSSWQKKDSPEKLKVMVQVNTSGEE 151
>gi|432864566|ref|XP_004070352.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Oryzias latipes]
Length = 291
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 94/149 (63%), Gaps = 13/149 (8%)
Query: 30 AATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
AA A++SV++RV QAA R R P R+VAVSKTKP +I + Y G R FG
Sbjct: 4 AAMSEEVGKAIQSVLERVTQAATRRPRTLPAVTPRLVAVSKTKPPEMIVEAYRHGQRNFG 63
Query: 88 ENYVQEIVEKAAQLPDDLE------WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAG 141
ENYV E+VEKA+ P LE WHFIG+LQ N V LL GV NL +VE+VD+ K+A
Sbjct: 64 ENYVNELVEKASD-PLILESCPEIKWHFIGHLQKNNVNKLL-GVSNLFLVETVDSAKLAD 121
Query: 142 RLNRMVETM---GRKPLKVLVQVNTSGEE 167
R+N + + + LKV+VQ+NTSGE+
Sbjct: 122 RVNSSWQRLRGADTQRLKVMVQINTSGEQ 150
>gi|301763705|ref|XP_002917283.1| PREDICTED: LOW QUALITY PROTEIN: proline synthase co-transcribed
bacterial homolog protein-like [Ailuropoda melanoleuca]
Length = 305
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHR 84
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R
Sbjct: 34 AGSMSAELGIGFALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQR 93
Query: 85 CFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+ K+
Sbjct: 94 TFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLIA-VPNLFMLETVDSVKL 152
Query: 140 AGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
A ++N + + LKV+VQVNTSGEE
Sbjct: 153 ADKVNSSWQKKDSPEKLKVMVQVNTSGEE 181
>gi|302674964|ref|XP_003027166.1| hypothetical protein SCHCODRAFT_61244 [Schizophyllum commune H4-8]
gi|300100852|gb|EFI92263.1| hypothetical protein SCHCODRAFT_61244 [Schizophyllum commune H4-8]
Length = 280
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 88/131 (67%), Gaps = 9/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKA 98
L+ + RV +AA +S P +VAVSK KP S + +E AG R FGENYVQE+V+KA
Sbjct: 18 LQDIRDRV-KAASGASNPT----LVAVSKYKPASDVLACFEHAGQRDFGENYVQELVDKA 72
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG--RKPLK 156
QLP ++ WHFIG LQSNK K L+A +PNL ++++ + K A LN+ + G ++ L
Sbjct: 73 KQLPAEIRWHFIGTLQSNKSKTLVA-IPNLHTIQTLTSTKAANLLNKALSEAGDAQRRLN 131
Query: 157 VLVQVNTSGEE 167
VL+QVNTSGEE
Sbjct: 132 VLIQVNTSGEE 142
>gi|109900019|ref|YP_663274.1| hypothetical protein Patl_3718 [Pseudoalteromonas atlantica T6c]
gi|109702300|gb|ABG42220.1| Protein of unknown function UPF0001 [Pseudoalteromonas atlantica
T6c]
Length = 227
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 7/135 (5%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G A L+ ++ + Q+ ++RP + ++++AV+KTKPVS I Q YEAGHR FGENYVQE
Sbjct: 2 GTIAERLKIALKTITQSVCDANRPANSVKLLAVTKTKPVSDIVQAYEAGHRLFGENYVQE 61
Query: 94 IVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
V K QL + D+EWHFIG LQSNK +P+ N V S+D KIA RLN +
Sbjct: 62 GVGKIQQLRELSDIEWHFIGPLQSNKTRPV---AENFDWVHSIDRLKIAQRLND--QRSA 116
Query: 152 RKPLKVLVQVNTSGE 166
K L V +QVN E
Sbjct: 117 HKKLNVCIQVNVDNE 131
>gi|241598580|ref|XP_002404760.1| proline synthetase associated protein, putative [Ixodes scapularis]
gi|215500480|gb|EEC09974.1| proline synthetase associated protein, putative [Ixodes scapularis]
Length = 248
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 88/137 (64%), Gaps = 10/137 (7%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A AL+ V ++V A++ S PP R+ VAVSKTKP ++ YE G R FGENY+QE+ E
Sbjct: 11 AKALQLVREKVVAASKERSGPPARL--VAVSKTKPAELLIAAYEEGQRHFGENYIQELEE 68
Query: 97 KAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
KA P+ +++WHFIG LQ NKV LA VPNL MVE++++ K A LN
Sbjct: 69 KANS-PEIQTACPEIKWHFIGRLQRNKVAK-LAKVPNLFMVETLESSKTAMALNSCWALN 126
Query: 151 GRKPLKVLVQVNTSGEE 167
G PL V+VQVNTSGEE
Sbjct: 127 GLPPLNVMVQVNTSGEE 143
>gi|157823503|ref|NP_001100790.1| proline synthase co-transcribed bacterial homolog protein [Rattus
norvegicus]
gi|149057846|gb|EDM09089.1| proline synthetase co-transcribed (predicted) [Rattus norvegicus]
Length = 275
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 92/137 (67%), Gaps = 9/137 (6%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++E
Sbjct: 16 ALRAVNERVQQSVARRPRGLPAIQPRLVAVSKTKPTEMVIEAYGHGQRTFGENYVQELLE 75
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA+ +++WHFIG+LQ V L+A VPNL+M+E++D+ K+A ++N + G
Sbjct: 76 KASNPTLLSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETIDSVKLADKVNSSWQKKG 134
Query: 152 RKP-LKVLVQVNTSGEE 167
LKV+VQ+NTSGE+
Sbjct: 135 SPERLKVMVQINTSGED 151
>gi|156405523|ref|XP_001640781.1| predicted protein [Nematostella vectensis]
gi|156227917|gb|EDO48718.1| predicted protein [Nematostella vectensis]
Length = 297
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 96/144 (66%), Gaps = 9/144 (6%)
Query: 31 ATDGVAATALRSVIQRVHQAAERSSRPPDRI--RIVAVSKTKPVSVIRQVYEAGHRCFGE 88
A D + AL++V+Q++++ AE+ ++ R+VAVSKTKP+ I + Y G R FGE
Sbjct: 2 AVDNIGL-ALKTVLQKINEVAEKRPENLQKLVPRLVAVSKTKPIECIIEAYNNGQRHFGE 60
Query: 89 NYVQEIVEKA--AQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN 144
NYVQE+V K+ +L + L WHFIG+LQ NK L+ GVPNL MVE+VD+EK+A LN
Sbjct: 61 NYVQELVGKSNDPRLRNLVGLRWHFIGHLQRNKCNNLV-GVPNLYMVETVDSEKLAATLN 119
Query: 145 RMVETM-GRKPLKVLVQVNTSGEE 167
R+PLKV+V+VNTS E+
Sbjct: 120 NSWGKFPNREPLKVMVEVNTSEEK 143
>gi|148232210|ref|NP_001091336.1| proline synthetase co-transcribed homolog [Xenopus laevis]
gi|125858539|gb|AAI29542.1| LOC100037173 protein [Xenopus laevis]
Length = 261
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 93/142 (65%), Gaps = 13/142 (9%)
Query: 39 ALRSVIQRVHQAAER--SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
AL+SV +RV AA R + P R+VAVSKTKPV V+ + Y G R FGENYVQE+ E
Sbjct: 8 ALQSVRERVQHAAARRIKTLPAIDPRLVAVSKTKPVDVVIEAYRHGQRYFGENYVQELAE 67
Query: 97 KAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
KA+ P D++WHFIG+LQ + L+ GVPNL ++E++D+ K+A ++N +
Sbjct: 68 KASD-PSLLSSCPDIKWHFIGHLQKTHINKLV-GVPNLYILETIDSVKLADKVNSSWQKK 125
Query: 151 G-RKPLKVLVQVNTSGEE--YG 169
G + LKV+VQVNTS E+ YG
Sbjct: 126 GSSEKLKVMVQVNTSSEDSKYG 147
>gi|355713742|gb|AES04772.1| proline synthetase co-transcribed-like protein [Mustela putorius
furo]
Length = 277
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 12/152 (7%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEA 81
A S + + ALR+V +RV QA R R P + R+VAVSKTKP ++ + Y
Sbjct: 4 AGSMSAELGVGFALRAVNERVQQAVARRPRDLPDLPAIQPRLVAVSKTKPADMVIEAYSH 63
Query: 82 GHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDN 136
G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+VD+
Sbjct: 64 GQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDS 122
Query: 137 EKIAGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
K+A ++N + LKV+VQVNTSGEE
Sbjct: 123 VKLADKVNSSWQKKSSPERLKVMVQVNTSGEE 154
>gi|296412370|ref|XP_002835897.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629694|emb|CAZ80054.1| unnamed protein product [Tuber melanosporum]
Length = 264
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 84/134 (62%), Gaps = 10/134 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKA 98
L++V+QR+ A P+ +R+VAVSK KP + + ++E GH FGENY E++EKA
Sbjct: 27 LQAVLQRISSVAHS----PNSVRLVAVSKLKPATDVLAIHERTGHTHFGENYSHELLEKA 82
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR----MVETMGRKP 154
A LP L WHFIG LQ+NK K L +PNL VESVD K A L + ++ T P
Sbjct: 83 ASLPTALNWHFIGALQTNKCKHLAERIPNLWAVESVDTVKKADALEKGRAALLSTSPSTP 142
Query: 155 -LKVLVQVNTSGEE 167
L+V VQVNTSGEE
Sbjct: 143 KLRVYVQVNTSGEE 156
>gi|442749673|gb|JAA66996.1| Putative proline synthetase associated protein [Ixodes ricinus]
Length = 248
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 88/137 (64%), Gaps = 10/137 (7%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A AL+ V ++V A++ S PP R+ VAVSKTKP ++ YE G R FGENY+QE+ E
Sbjct: 11 AKALQLVREKVIAASKERSGPPARL--VAVSKTKPAELLIAAYEEGQRHFGENYIQELEE 68
Query: 97 KAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
KA P+ +++WHFIG LQ NKV LA +PNL MVE++++ K A LN
Sbjct: 69 KANN-PEIQTACPEIKWHFIGRLQRNKVAK-LAKIPNLFMVETLESSKTAMALNSCWALN 126
Query: 151 GRKPLKVLVQVNTSGEE 167
G PL V+VQVNTSGEE
Sbjct: 127 GLPPLNVMVQVNTSGEE 143
>gi|407701081|ref|YP_006825868.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'Black Sea 11']
gi|407250228|gb|AFT79413.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'Black Sea 11']
Length = 228
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S + + QAA + RPP+ ++++AVSKTKPVS I + YEAG R FGENYVQE VE
Sbjct: 5 AERLDSARKGIDQAATSAHRPPNSVKLLAVSKTKPVSDIMEAYEAGQRMFGENYVQEGVE 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K +L D+EWH IG +QSNK K + + V+SVD EKIA RLN + ++M
Sbjct: 65 KVQELSHLSDIEWHMIGPIQSNKTKVV---AEHFDWVQSVDREKIARRLNEQRPDSM--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL V +QVN EE
Sbjct: 120 PLNVCIQVNIDDEE 133
>gi|328352082|emb|CCA38481.1| UPF0001 protein PM0112 [Komagataella pastoris CBS 7435]
Length = 246
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 6/126 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
++ ++ + RP + +V VSK KP S I +Y+AG R FGENYVQE+V KA +LP
Sbjct: 22 ILDQITSVKSPNGRP---VNLVCVSKLKPSSDIMALYDAGFRHFGENYVQELVSKAQELP 78
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LKVLVQV 161
D++WHFIG LQ+NK K L + NL VE++D+ K A +LN + KP + V +QV
Sbjct: 79 KDIKWHFIGGLQTNKCKDLATRIDNLYAVETIDSIKKANKLNSSRD--ASKPKINVFIQV 136
Query: 162 NTSGEE 167
NTSGEE
Sbjct: 137 NTSGEE 142
>gi|195395082|ref|XP_002056165.1| GJ10370 [Drosophila virilis]
gi|194142874|gb|EDW59277.1| GJ10370 [Drosophila virilis]
Length = 254
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 97/142 (68%), Gaps = 17/142 (11%)
Query: 39 ALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
L+ V++R+ A + SRP + + +VAVSKTKPV + Y+AG R FGENYVQE+
Sbjct: 14 GLQHVLKRIELALQ--SRPKEINAPKPLLVAVSKTKPVECVIAAYKAGQRHFGENYVQEL 71
Query: 95 VEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM-- 146
VEK +Q PD D++WH IG+LQSNK+ +L +PNL MV++VD+EK+A +++
Sbjct: 72 VEK-SQHPDILAQCPDIKWHLIGHLQSNKINHVLK-LPNLHMVQTVDSEKLANKIDAAWA 129
Query: 147 -VETMGRKPLKVLVQVNTSGEE 167
++ +PL+VLVQ+NTSGE+
Sbjct: 130 KLQPTPSEPLRVLVQINTSGED 151
>gi|407684824|ref|YP_006799998.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'English Channel 673']
gi|407246435|gb|AFT75621.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'English Channel 673']
Length = 228
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S + + QAA + RPP+ ++++AVSKTKPVS I + YEAG R FGENYVQE VE
Sbjct: 5 AERLDSARKGIDQAATSAHRPPNSVKLLAVSKTKPVSDIMEAYEAGQRMFGENYVQEGVE 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K +L D+EWH IG +QSNK K + + V+SVD EKIA RLN + ++M
Sbjct: 65 KVQELSHLSDIEWHMIGPIQSNKTKVV---AEHFDWVQSVDREKIARRLNEQRPDSM--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL V +QVN EE
Sbjct: 120 PLNVCIQVNIDDEE 133
>gi|357605973|gb|EHJ64853.1| proline synthetase co-transcribed bacterial-like protein [Danaus
plexippus]
Length = 242
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 92/139 (66%), Gaps = 12/139 (8%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
L++V+ ++ A R ++ P R+VAVSK KPVS+I Q YEAG R FGENYV E+ +
Sbjct: 3 GLKTVLAQIEVAVARRNKDLPQVSPRLVAVSKIKPVSLIIQTYEAGQRHFGENYVNELAD 62
Query: 97 KAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
KA+ P+ D+ WHFIG+LQ+NK+ LL G P L MVE+V ++K+A LN+
Sbjct: 63 KASD-PEILEKCKDIHWHFIGHLQTNKINRLL-GSPGLYMVETVHSQKLADNLNKQWPKY 120
Query: 151 GR--KPLKVLVQVNTSGEE 167
+ + LKV+VQVNTSGE+
Sbjct: 121 MKADEKLKVMVQVNTSGED 139
>gi|254568594|ref|XP_002491407.1| Single-domain racemase, possibly non-specific due to the lack of
the second domain [Komagataella pastoris GS115]
gi|238031204|emb|CAY69127.1| Single-domain racemase, possibly non-specific due to the lack of
the second domain [Komagataella pastoris GS115]
Length = 269
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 6/126 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
++ ++ + RP + +V VSK KP S I +Y+AG R FGENYVQE+V KA +LP
Sbjct: 45 ILDQITSVKSPNGRP---VNLVCVSKLKPSSDIMALYDAGFRHFGENYVQELVSKAQELP 101
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LKVLVQV 161
D++WHFIG LQ+NK K L + NL VE++D+ K A +LN + KP + V +QV
Sbjct: 102 KDIKWHFIGGLQTNKCKDLATRIDNLYAVETIDSIKKANKLNSSRD--ASKPKINVFIQV 159
Query: 162 NTSGEE 167
NTSGEE
Sbjct: 160 NTSGEE 165
>gi|260438390|ref|ZP_05792206.1| pyridoxal phosphate enzyme, YggS family [Butyrivibrio crossotus DSM
2876]
gi|292808976|gb|EFF68181.1| pyridoxal phosphate enzyme, YggS family [Butyrivibrio crossotus DSM
2876]
Length = 230
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 92/132 (69%), Gaps = 6/132 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ VI+R+ AA+R+ R P+ I ++AVSKTKPV +I+QVY+AG R FGEN VQEI K+
Sbjct: 6 LKKVIERMENAAKRAGRNPEDITLIAVSKTKPVELIKQVYDAGIREFGENKVQEIDRKSE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP D++WH IG+LQ NKVK + + ++ SVD+ ++A ++++ T+G + VL+
Sbjct: 66 ILPKDIKWHMIGHLQRNKVKTV---IKEACLIHSVDSIRLAEQISKDAATLGIS-VPVLL 121
Query: 160 QVNTSGEE--YG 169
+VN + EE YG
Sbjct: 122 EVNIACEESKYG 133
>gi|194746150|ref|XP_001955547.1| GF16195 [Drosophila ananassae]
gi|190628584|gb|EDV44108.1| GF16195 [Drosophila ananassae]
Length = 249
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 88/124 (70%), Gaps = 15/124 (12%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA------AQLPDDLE 106
+++RP +VAVSKTKP + + Y+AG R FGENYVQE+ EK+ AQ P D+
Sbjct: 29 KTARP----VLVAVSKTKPADAVIEAYQAGQRDFGENYVQELEEKSRHPDIVAQCP-DIR 83
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN---RMVETMGRKPLKVLVQVNT 163
WHFIG++QSNK+ +LA VPNL M+++VD++K+A +L+ V+ +PLKVL+Q+NT
Sbjct: 84 WHFIGHMQSNKINKVLA-VPNLYMIQTVDSQKLATKLDAAWSKVQPPKDEPLKVLIQINT 142
Query: 164 SGEE 167
SGE+
Sbjct: 143 SGED 146
>gi|281205000|gb|EFA79194.1| hypothetical protein PPL_08020 [Polysphondylium pallidum PN500]
Length = 278
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 93/143 (65%), Gaps = 6/143 (4%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCF 86
+ + T + T R +++R + + + P + +VAVSKTKP +IR++YE GHR F
Sbjct: 36 STATTTYKMDETEKRELLERYNAIKSKITDP--NVTLVAVSKTKPSFMIRELYENGHRHF 93
Query: 87 GENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN 144
GENY+QE+ K+ +L D D++WHFIG++QSNK+K L V NLA+VE+V+ A +
Sbjct: 94 GENYIQELELKSKELEDLKDIKWHFIGSVQSNKIKQ-LGSVLNLAVVETVEKSSAADKFA 152
Query: 145 RMVETMGRKPLKVLVQVNTSGEE 167
+ + PL+++VQVNTSGE+
Sbjct: 153 KCFSNHSQ-PLEIMVQVNTSGEQ 174
>gi|344281642|ref|XP_003412587.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Loxodonta africana]
Length = 275
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 97/155 (62%), Gaps = 17/155 (10%)
Query: 23 AETMAASAATDGVAATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQV 78
A TM+A ALR V +RV QA R RP D + R+VAVSKTKP ++ +
Sbjct: 4 AGTMSAELGV----GFALRMVNERVQQAVAR--RPQDLPAIQPRLVAVSKTKPADMVIEA 57
Query: 79 YEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVES 133
Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL M+E+
Sbjct: 58 YSHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLIA-VPNLFMLET 116
Query: 134 VDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEE 167
VD+ K+A ++N + G + LKV+VQ+N+SGEE
Sbjct: 117 VDSVKLADKVNSSWQKKGSPERLKVMVQINSSGEE 151
>gi|367015344|ref|XP_003682171.1| hypothetical protein TDEL_0F01490 [Torulaspora delbrueckii]
gi|359749833|emb|CCE92960.1| hypothetical protein TDEL_0F01490 [Torulaspora delbrueckii]
Length = 259
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 4/120 (3%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHF 109
AA S + D + ++AVSK KP S I+ +Y+ G R FGENYVQE++EK+ LP D++WHF
Sbjct: 32 AASYSKKSSD-VLLLAVSKLKPASDIKILYDHGVRHFGENYVQELIEKSQILPSDIQWHF 90
Query: 110 IGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
IG LQ+NK K LA VPNL+ VE++D+ K A +LN R+ KP+ +Q+NTS EE
Sbjct: 91 IGGLQTNKCKD-LAKVPNLSFVETIDSLKKAKKLNEARLKFNPDAKPVACNIQINTSSEE 149
>gi|393221544|gb|EJD07029.1| hypothetical protein FOMMEDRAFT_76910 [Fomitiporia mediterranea
MF3/22]
Length = 286
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + +RV ++ S D +VAVSK KP S I YE G FGENY QE+V+KA
Sbjct: 29 LAEIRERVRDSSHSVSPQRDPPVLVAVSKYKPASDILACYEQGQLDFGENYAQELVDKAK 88
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET-MGRKPLKVL 158
QLP D+ WHFIG Q+NK K +LAG+PNL ++++ + K A LNR + PL VL
Sbjct: 89 QLPQDIRWHFIGGFQTNKSK-VLAGIPNLYALQTLASIKAADSLNRALPAERESSPLNVL 147
Query: 159 VQVNTSGEE 167
+QVNTSGE+
Sbjct: 148 LQVNTSGED 156
>gi|409078532|gb|EKM78895.1| hypothetical protein AGABI1DRAFT_114450 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 271
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 12/142 (8%)
Query: 35 VAATALRSVIQRVHQAAERSSRPPDRIR---------IVAVSKTKPVSVIRQVYEAGHRC 85
+ + L+ I+R + + DR+R ++AVSK KP S I YE H
Sbjct: 4 IDPSPLQPAIERAEELESALAEIRDRVRRASSGTTPTLIAVSKYKPASDIMACYEQRHHD 63
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQE+V+KAA LP D+ WHFIG LQSNK K +LA +PNL V+++ + K A LN+
Sbjct: 64 FGENYVQELVDKAAILPRDIRWHFIGALQSNKAK-ILASIPNLYCVQTLASAKTASALNK 122
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
+ + L+VLVQVNTSGEE
Sbjct: 123 AIPE--DRILRVLVQVNTSGEE 142
>gi|344304977|gb|EGW35209.1| hypothetical protein SPAPADRAFT_133045 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 84/127 (66%), Gaps = 7/127 (5%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
R++I +++Q P ++ +VAVSK KP S I+ +Y+AG R FGENYVQE++ K+ +
Sbjct: 20 RAIIDKINQL-----NP--KVNLVAVSKIKPSSDIKALYDAGVRHFGENYVQELIAKSQE 72
Query: 101 LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
LP D++WHFIG LQS K K L V +L VE++D+ K +L+ E +G +KV +Q
Sbjct: 73 LPKDIKWHFIGGLQSGKAKDLAKHVESLYAVETIDSLKKCKQLDNTREKVGGSEIKVFLQ 132
Query: 161 VNTSGEE 167
+NTS EE
Sbjct: 133 INTSCEE 139
>gi|406597812|ref|YP_006748942.1| alanine racemase domain-containing protein [Alteromonas macleodii
ATCC 27126]
gi|406375133|gb|AFS38388.1| alanine racemase domain-containing protein [Alteromonas macleodii
ATCC 27126]
Length = 228
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S + + QAA + RPP+ ++++AVSKTKPVS I + Y+AG R FGENYVQE VE
Sbjct: 5 AERLDSARKGIDQAATSAHRPPNSVKLLAVSKTKPVSDIMEAYDAGQRMFGENYVQEGVE 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K +L D+EWH IG +QSNK K + + V+SVD EKIA RLN + ++M
Sbjct: 65 KVQELSHLSDIEWHMIGPIQSNKTKVV---AEHFDWVQSVDREKIARRLNEQRPDSM--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL V +QVN EE
Sbjct: 120 PLNVCIQVNIDDEE 133
>gi|299749232|ref|XP_001838603.2| proline synthetase associated protein [Coprinopsis cinerea
okayama7#130]
gi|298408344|gb|EAU83204.2| proline synthetase associated protein [Coprinopsis cinerea
okayama7#130]
Length = 268
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 83/128 (64%), Gaps = 7/128 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ +RV A+ SS P +VAVSK KP I +E GH FGENYVQE+ EKA
Sbjct: 18 LGAIRERVATAS--SSSP----TLVAVSKYKPAGDILACHELGHLDFGENYVQELEEKAK 71
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP D+ WHFIG LQSNK K LA +PNL ++++ + K A LN+ + + PL+VL+
Sbjct: 72 ILPSDIRWHFIGTLQSNKAK-TLALIPNLYSIQTLGSVKAANALNKALSSDRTTPLRVLL 130
Query: 160 QVNTSGEE 167
QVNTSGE+
Sbjct: 131 QVNTSGED 138
>gi|119775610|ref|YP_928350.1| hypothetical protein Sama_2477 [Shewanella amazonensis SB2B]
gi|119768110|gb|ABM00681.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 235
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 83/128 (64%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
QR+ QAA+ SSR P I+++AVSKTKP S I+ Y+AG R FGENYVQE V+K L
Sbjct: 13 QRIVQAAQISSRNPSEIKLLAVSKTKPASDIQAAYDAGQRLFGENYVQEGVQKITDLTSP 72
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
++EWHFIG LQSNK +P+ + + ++D EK+A RLN R E PL VL+
Sbjct: 73 CPNIEWHFIGPLQSNKSRPV---AEHFDWLHTLDREKLAIRLNEQRPAEL---APLNVLI 126
Query: 160 QVNTSGEE 167
QVN S EE
Sbjct: 127 QVNISDEE 134
>gi|114051511|ref|NP_001040304.1| proline synthetase co-transcribed bacterial-like protein [Bombyx
mori]
gi|87248205|gb|ABD36155.1| proline synthetase co-transcribed bacterial-like protein [Bombyx
mori]
Length = 262
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 93/138 (67%), Gaps = 10/138 (7%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRI--RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
L++V+ ++ A R S+ +I R+VAVSK KPV +I + Y AG R FGENYV E+ +
Sbjct: 22 GLKTVLSQIEIAVARRSKDLPQIAPRLVAVSKIKPVELIVEAYNAGQRHFGENYVNELSD 81
Query: 97 KAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--MVET 149
KA+ + D++WHFIG+LQ+NK+ LL G P L MVE+VD+EK+A LN+ +
Sbjct: 82 KASDPLILEKCKDIKWHFIGHLQTNKINKLL-GSPGLFMVETVDSEKLADNLNKQWLKYR 140
Query: 150 MGRKPLKVLVQVNTSGEE 167
++ L+V+VQVNTSGE+
Sbjct: 141 KEKERLRVMVQVNTSGEQ 158
>gi|407688749|ref|YP_006803922.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'Balearic Sea AD45']
gi|407292129|gb|AFT96441.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'Balearic Sea AD45']
Length = 228
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 85/134 (63%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S + + QAA + RPP+ ++++AVSKTKPVS I + YE G R FGENYVQE VE
Sbjct: 5 AERLNSARKGIDQAATSAHRPPNSVKLLAVSKTKPVSDIMEAYEGGQRMFGENYVQEGVE 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K +L D+EWH IG +QSNK K + + V+SVD EKIA RLN + ++M
Sbjct: 65 KVQELSHLSDIEWHMIGPIQSNKTKVV---AEHFDWVQSVDREKIARRLNEQRPDSM--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL V +QVN EE
Sbjct: 120 PLNVCIQVNIDDEE 133
>gi|332142462|ref|YP_004428200.1| alanine racemase domain-containing protein [Alteromonas macleodii
str. 'Deep ecotype']
gi|410862674|ref|YP_006977908.1| alanine racemase domain-containing protein [Alteromonas macleodii
AltDE1]
gi|327552484|gb|AEA99202.1| alanine racemase domain protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|410819936|gb|AFV86553.1| alanine racemase domain-containing protein [Alteromonas macleodii
AltDE1]
Length = 232
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S + + QAA + RPP+ ++++AVSKTKPVS I + YEAG R FGENYVQE VE
Sbjct: 5 AERLNSARKGIDQAANSAHRPPNSVKLLAVSKTKPVSDIIEAYEAGQRMFGENYVQEGVE 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K +L D++EWH IG +QSNK K + + V+SVD EKIA RLN + E++
Sbjct: 65 KVQELSNLDNIEWHMIGPIQSNKTKVV---AEHFDWVQSVDREKIARRLNEQRPESL--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL V +QVN E+
Sbjct: 120 PLNVCIQVNVDDED 133
>gi|219129146|ref|XP_002184757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403866|gb|EEC43816.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 250
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 93/173 (53%), Gaps = 25/173 (14%)
Query: 24 ETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGH 83
E+ ASA D A LR V ++ QA + RIR+VAVSKTKP+ +++Q Y+AG
Sbjct: 1 ESTTASAVVD--VARNLRDVQDQIDQACRTHAIESTRIRLVAVSKTKPIELLQQAYDAGC 58
Query: 84 RCFGENYVQEIVEKAAQL------PDDLEWHFIGNLQSNK----VKPLLAGVPNLAMV-- 131
R FGENY QE+ +K L D + WHFIG LQSNK +KP L PN V
Sbjct: 59 RVFGENYAQELADKVPLLNQHDGNNDTVSWHFIGGLQSNKCNMLLKPFLEQAPNGPTVAN 118
Query: 132 ---ESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE------EYGECFIKC 175
E+V K+A +LN V + LK+ VQVNTSGE E EC C
Sbjct: 119 LTIETVATVKLANKLNHAVPE--PQTLKIFVQVNTSGEDSKSGIEPAECVALC 169
>gi|156836871|ref|XP_001642476.1| hypothetical protein Kpol_264p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113010|gb|EDO14618.1| hypothetical protein Kpol_264p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 270
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 38 TALRSVIQRVHQA-AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
T S++ ++ A A+ D++ ++AVSK KP S ++ +Y+ G R FGENYVQE++E
Sbjct: 34 TNYESILAQIRDAEAKYGINNKDQVMLLAVSKLKPASDVQLLYDHGIRHFGENYVQELIE 93
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKP 154
K+ LP D+ WHFIG LQSNK K LA +PNL VE+VD+ K A +LN R P
Sbjct: 94 KSIALPKDINWHFIGGLQSNKCKD-LAKIPNLYAVETVDSLKKANKLNEARSKYNPDSPP 152
Query: 155 LKVLVQVNTSGEE 167
+ +Q+NTS EE
Sbjct: 153 INCFIQINTSNEE 165
>gi|410637877|ref|ZP_11348447.1| hypothetical protein GLIP_3031 [Glaciecola lipolytica E3]
gi|410142563|dbj|GAC15652.1| hypothetical protein GLIP_3031 [Glaciecola lipolytica E3]
Length = 230
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+S + ++ A ++++R P+ I+++AVSKTKPVS I YEAGHR FGENYVQE VEK
Sbjct: 8 LKSAHESLNMALKKANRAPNSIQLLAVSKTKPVSDIVLAYEAGHRLFGENYVQEGVEKVQ 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+L +D++WHFIG +QSNK K L+A N V +VD KIA RL+ + K L V
Sbjct: 68 ELQELNDIQWHFIGPIQSNKSK-LVA--ENFDWVHTVDRAKIAKRLSN--QHTPHKKLNV 122
Query: 158 LVQVNTSGEE 167
L+QVN + EE
Sbjct: 123 LIQVNINTEE 132
>gi|342321407|gb|EGU13341.1| Cytoplasmic protein [Rhodotorula glutinis ATCC 204091]
Length = 302
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ + V QA +R P R+V VSK KP S I +YE G R FGENY QE+ KA +LP
Sbjct: 48 IAREVEQATQRRGAGPTP-RLVTVSKYKPASDILALYEHGVRHFGENYPQELEGKAQELP 106
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG---RKPLKVLV 159
+D+ WHFIG LQSNK K +LA +PNL +E++ + K A L+ + ++ +PL V +
Sbjct: 107 NDIAWHFIGTLQSNKCK-MLAAIPNLFAIETLTSVKAANHLHNALSSLPSTRSEPLNVFI 165
Query: 160 QVNTSGEE 167
Q+NTSGEE
Sbjct: 166 QINTSGEE 173
>gi|195108629|ref|XP_001998895.1| GI23376 [Drosophila mojavensis]
gi|193915489|gb|EDW14356.1| GI23376 [Drosophila mojavensis]
Length = 255
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 96/146 (65%), Gaps = 21/146 (14%)
Query: 37 ATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
A L+ V++R+ + SRP + + +VAVSKTKPV I + Y AG R FGENYVQ
Sbjct: 12 AAGLQHVLKRIESVLQ--SRPQEINTPKPLLVAVSKTKPVECIIEAYNAGQRHFGENYVQ 69
Query: 93 EIVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-- 144
E+VEK +Q PD D++WH IG+LQSNK+ +L +PNL M+++VD+EK+A ++
Sbjct: 70 ELVEK-SQHPDILAQCPDIKWHLIGHLQSNKINKVLK-LPNLYMIQTVDSEKLANGIDAA 127
Query: 145 ---RMVETMGRKPLKVLVQVNTSGEE 167
R E +PL+VLVQVNTSGE+
Sbjct: 128 WAKRQPEPT--EPLRVLVQVNTSGED 151
>gi|195159394|ref|XP_002020564.1| GL14062 [Drosophila persimilis]
gi|198449718|ref|XP_002136950.1| GA26943 [Drosophila pseudoobscura pseudoobscura]
gi|194117333|gb|EDW39376.1| GL14062 [Drosophila persimilis]
gi|198130728|gb|EDY67508.1| GA26943 [Drosophila pseudoobscura pseudoobscura]
Length = 254
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 82/114 (71%), Gaps = 11/114 (9%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA------AQLPDDLEWHFIGNLQSN 116
+VAVSKTKP + + Y+ G R FGENYVQE+VEK+ AQ P D++WHFIG+LQ+N
Sbjct: 40 LVAVSKTKPADAVIEAYKTGQRDFGENYVQELVEKSQHPEILAQCP-DIKWHFIGHLQNN 98
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM---GRKPLKVLVQVNTSGEE 167
K+ +L+ +PNL M+++VD+EK+A +L+ + PL+VL+Q+NTSGEE
Sbjct: 99 KINKILS-LPNLHMIQTVDSEKLATKLDAAWSKLKPDTEPPLRVLIQINTSGEE 151
>gi|426199541|gb|EKV49466.1| hypothetical protein AGABI2DRAFT_184200 [Agaricus bisporus var.
bisporus H97]
Length = 271
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 86/142 (60%), Gaps = 12/142 (8%)
Query: 35 VAATALRSVIQRVHQAAERSSRPPDRIR---------IVAVSKTKPVSVIRQVYEAGHRC 85
+ + L+ I+R + + DR+R ++AVSK KP S I Y+ H
Sbjct: 4 IDPSPLQPAIERAEELESALAEIRDRVRRASSGTTPTLIAVSKYKPASDIMACYKQRHHD 63
Query: 86 FGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
FGENYVQE+V+KAA LP D+ WHFIG LQSNK K +LA +PNL V+++ K A LN+
Sbjct: 64 FGENYVQELVDKAAILPRDIRWHFIGALQSNKAK-ILASIPNLYCVQTLAFAKTASALNK 122
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
+ + L+VLVQVNTSGEE
Sbjct: 123 AISE--DRTLRVLVQVNTSGEE 142
>gi|53804165|ref|YP_113991.1| hypothetical protein MCA1536 [Methylococcus capsulatus str. Bath]
gi|53757926|gb|AAU92217.1| conserved hypothetical protein TIGR00044 [Methylococcus capsulatus
str. Bath]
Length = 229
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V QR+ A + RP D +R+VAVSKT+P +V+R Y+ G R FGENY+QE +EK
Sbjct: 8 LQAVRQRIRAAEQACGRPEDSVRLVAVSKTQPAAVLRAAYDLGQREFGENYLQEAMEKQD 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D D+ WHFIG +QSNK + LLA V S+D KIA RLN GR PL V
Sbjct: 68 LLADLDIVWHFIGPIQSNKTR-LLA--ERFDWVHSIDRLKIAQRLNDQ-RPPGRAPLNVC 123
Query: 159 VQVNTSGE 166
+QVN GE
Sbjct: 124 IQVNIGGE 131
>gi|448080130|ref|XP_004194549.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
gi|359375971|emb|CCE86553.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
Length = 298
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Query: 45 QRVHQAAERSSRPP--DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+++ E SR D + +VAVSK KP S I+ +Y+ G R FGENYVQE+V KA LP
Sbjct: 70 EKIRAQVEDCSRQSKNDDVTLVAVSKLKPASDIQALYDHGVRHFGENYVQELVGKAKVLP 129
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D++WHFIG LQ+ K K L +PNL VE+VD K +LN ++ ++V +Q+N
Sbjct: 130 VDIKWHFIGGLQTGKCKDLSKNIPNLYSVEAVDTLKKCQKLNDTRKSANGSVIEVYLQIN 189
Query: 163 TSGEEYGECF 172
TSGEE F
Sbjct: 190 TSGEEQKSGF 199
>gi|291236536|ref|XP_002738198.1| PREDICTED: proline synthetase co-transcribed homolog [Saccoglossus
kowalevskii]
Length = 298
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 91/160 (56%), Gaps = 25/160 (15%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSR----------PPDRIRIVAVSKTKPVSVIR 76
A A D L+SV++R+ A + S+ P + R+VAVSKTK +S I+
Sbjct: 4 AVMMAADNDVGKTLKSVLERIQTACDSRSQKSKCNKFQDLPKVQPRLVAVSKTKAISTIQ 63
Query: 77 QVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAM 130
Y G R FGENYV EI+EKA P D+ WH++G+LQ NKV ++ G+PNL M
Sbjct: 64 TAYIHGQRHFGENYVHEIIEKATD-PTIINECCDIRWHYVGHLQRNKVNKII-GIPNLFM 121
Query: 131 VESVDNEKIAGRLNRMVETMGRK----PLKVLVQVNTSGE 166
VES+D K+A LN GRK LKV+VQVNTS E
Sbjct: 122 VESLDTPKLADVLN---AAWGRKKKVGKLKVMVQVNTSNE 158
>gi|301606812|ref|XP_002933001.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Xenopus (Silurana) tropicalis]
Length = 265
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 89/138 (64%), Gaps = 11/138 (7%)
Query: 39 ALRSVIQRVHQAAER--SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
AL+ V +RV AA R + P R+VAVSKTKPV ++ Y G R FGENYVQE+ E
Sbjct: 13 ALQCVRERVQHAAARRLKTLPAIDPRLVAVSKTKPVDMVIDAYSHGQRYFGENYVQELAE 72
Query: 97 KA------AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
KA A P D++WHFIG+LQ + L+ GVPNL ++E++D+ K+A ++N +
Sbjct: 73 KASDPNLLASCP-DIKWHFIGHLQKTHINKLV-GVPNLYILETIDSIKLADKVNSSWQKK 130
Query: 151 G-RKPLKVLVQVNTSGEE 167
G + LKV+VQVNTS E+
Sbjct: 131 GSSEKLKVMVQVNTSSED 148
>gi|195452638|ref|XP_002073440.1| GK13144 [Drosophila willistoni]
gi|194169525|gb|EDW84426.1| GK13144 [Drosophila willistoni]
Length = 249
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 83/114 (72%), Gaps = 11/114 (9%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFIGNLQSN 116
+VAVSKTKP I + YEAG R FGENYVQE+VEK +Q PD ++ WHFIG+LQ+N
Sbjct: 35 LVAVSKTKPPEAIIEAYEAGQRDFGENYVQELVEK-SQHPDIRSKCPEIRWHFIGHLQNN 93
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRM---VETMGRKPLKVLVQVNTSGEE 167
K+ +L+ +PNL M+++VD+EK+A RL+ +E +PL+VL+Q+NTS E+
Sbjct: 94 KINKVLS-LPNLHMIQTVDSEKLATRLDAAWAKLEPKPEQPLRVLIQINTSQED 146
>gi|195505095|ref|XP_002099361.1| GE23404 [Drosophila yakuba]
gi|194185462|gb|EDW99073.1| GE23404 [Drosophila yakuba]
Length = 254
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 28/171 (16%)
Query: 39 ALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
L+ V++R+ + + RP + R +VAVSKTKP + + YEAG R FGENYVQE+
Sbjct: 14 GLQHVLKRIDEVLLQ--RPKEVAAARPLLVAVSKTKPAEAVIEAYEAGQRDFGENYVQEL 71
Query: 95 VEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN---R 145
EK+ PD D+ WHFIG++QSNK+ +L+ VPNL M+++VD+EK+A +L+
Sbjct: 72 EEKSRH-PDILAKCPDIRWHFIGHMQSNKINKVLS-VPNLRMIQTVDSEKLATKLDAAWS 129
Query: 146 MVETMGRKPLKVLVQVNTSGEEYGEC-----------FIKCSWSHSCLLMI 185
+ +PL+VL+Q+NTSGE+ FI+ + H LL I
Sbjct: 130 KQQPTPEEPLQVLIQINTSGEDVKSGIEAKDAPALYQFIRSNLKHLNLLGI 180
>gi|126138400|ref|XP_001385723.1| hypothetical protein PICST_48387 [Scheffersomyces stipitis CBS
6054]
gi|126093001|gb|ABN67694.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 250
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Query: 42 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL 101
+V+++V A++ S P +R+VAVSK KP I +Y AG R FGENYVQE++ K+ +L
Sbjct: 22 TVLEQVQSLAKKHSNVP--VRLVAVSKLKPSGDIMALYNAGVRHFGENYVQELIGKSKEL 79
Query: 102 PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
P D++WHFIG +QS K K L GV +L VE++D K +L+ + P++V +Q+
Sbjct: 80 PKDIKWHFIGGMQSGKAKDLAKGVESLFAVETIDALKKCKQLDNTRSRLDGAPIEVYLQI 139
Query: 162 NTSGEE 167
NTS E+
Sbjct: 140 NTSEED 145
>gi|332300649|ref|YP_004442570.1| hypothetical protein Poras_1469 [Porphyromonas asaccharolytica DSM
20707]
gi|332177712|gb|AEE13402.1| protein of unknown function UPF0001 [Porphyromonas asaccharolytica
DSM 20707]
Length = 221
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 86/135 (63%), Gaps = 9/135 (6%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
AE S+ P+++++VAVSK PV +R+ YEAG R FGEN QE+ EKA QLP+D++WHFI
Sbjct: 7 AEIRSQIPEQVQLVAVSKFHPVESVREAYEAGQRLFGENRAQELAEKAPQLPEDIQWHFI 66
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGE 170
G LQ NKVK + VP ++++ESVD+E + + + R+ L++L+Q + EE
Sbjct: 67 GTLQRNKVKYI---VPYVSLIESVDSEALLQEIVKQANRFDRQ-LRILLQYKIAQEES-- 120
Query: 171 CFIKCSWSHSCLLMI 185
K H+ LL +
Sbjct: 121 ---KSGLDHTELLAL 132
>gi|443728686|gb|ELU14925.1| hypothetical protein CAPTEDRAFT_138840 [Capitella teleta]
Length = 264
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 95/140 (67%), Gaps = 17/140 (12%)
Query: 40 LRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
L+SV++R+ A S+RP + + R+VAV+KTKPVS+++ Y G R FGENYV E++
Sbjct: 11 LKSVLERM--AVACSARPKELQHIQPRLVAVTKTKPVSMVKDAYACGQRHFGENYVNELL 68
Query: 96 EKAA------QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
EK+A + P ++ WHFIG+LQ NKV +LA VPNL MVE++D+EK+A N E
Sbjct: 69 EKSADQELIEKCP-EIHWHFIGHLQRNKVNKVLA-VPNLYMVETIDSEKLASACNAAWER 126
Query: 150 MGRKP--LKVLVQVNTSGEE 167
+ P LKV+VQ+NTS E+
Sbjct: 127 L-ENPHRLKVMVQINTSEEK 145
>gi|315127644|ref|YP_004069647.1| PLP-binding domain-containing protein [Pseudoalteromonas sp.
SM9913]
gi|315016158|gb|ADT69496.1| PLP-binding domain-containing protein [Pseudoalteromonas sp.
SM9913]
Length = 237
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 84/131 (64%), Gaps = 8/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ +AA ++ R + I ++AVSKTKP + I YE G R FGE+YVQE V+K A
Sbjct: 17 LTSAYARIAEAAHKAQRNSNDITLLAVSKTKPATDIMAAYEQGQRQFGESYVQEAVDKIA 76
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLK 156
QL D+ WHFIG +QSNK L+A N A V+SVD KIA RLN + ETM PL
Sbjct: 77 QLDTFSDIVWHFIGPIQSNK-SALVAA--NFAWVQSVDRLKIAKRLNSQRPETM--PPLN 131
Query: 157 VLVQVNTSGEE 167
VL+QVN S EE
Sbjct: 132 VLIQVNISEEE 142
>gi|313886741|ref|ZP_07820448.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923782|gb|EFR34584.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas
asaccharolytica PR426713P-I]
Length = 221
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 80/117 (68%), Gaps = 4/117 (3%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
AE S+ P+++++VAVSK PV +R+ YEAG R FGEN QE+ EKA QLP+D++WHFI
Sbjct: 7 AEIRSQIPEQVQLVAVSKFHPVESVREAYEAGQRLFGENRAQELAEKAPQLPEDIQWHFI 66
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
G LQ NKVK + VP ++++ESVD+E + + + R+ L++L+Q + EE
Sbjct: 67 GTLQRNKVKYI---VPYVSLIESVDSEALLQEIVKQANRFDRQ-LRILLQYKIAQEE 119
>gi|229829073|ref|ZP_04455142.1| hypothetical protein GCWU000342_01158 [Shuttleworthia satelles DSM
14600]
gi|229792236|gb|EEP28350.1| hypothetical protein GCWU000342_01158 [Shuttleworthia satelles DSM
14600]
Length = 235
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L++V + + +A R++R P + +VAVSKTKP + I+++Y G R FGENYVQE+VE
Sbjct: 3 AENLKTVRENITEACRRANRDPSEVTLVAVSKTKPEADIQEIYGQGVRDFGENYVQELVE 62
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
K LP D+ WH IG+LQ NKVK L ++A++ SVD ++A +N + ++ +
Sbjct: 63 KIDHLPGDIRWHMIGHLQRNKVKYLARRADSIALIHSVDTYRLAEEINIQAKK-NKRIID 121
Query: 157 VLVQVNTSGEE 167
+LV+VN + E+
Sbjct: 122 ILVEVNIADED 132
>gi|387017800|gb|AFJ51018.1| Proline synthase co-transcribed bacterial homolog protein-like
[Crotalus adamanteus]
Length = 276
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 94/145 (64%), Gaps = 10/145 (6%)
Query: 30 AATDGVAATALRSVIQRVHQAAER--SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFG 87
AA +G+ LR+V ++V QAA R + P R+VAVSKTKP ++ + Y G R FG
Sbjct: 7 AAGEGLPQ-MLRAVREQVQQAAARRPQTLPTTPPRLVAVSKTKPAEMVIEAYNHGQRSFG 65
Query: 88 ENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGR 142
ENYVQE++EKA+ +++WHFIG+LQ + V L+ VPNL MVE+VD+ K+A +
Sbjct: 66 ENYVQELLEKASDSSILSSCPEIKWHFIGHLQKSNVNKLIV-VPNLFMVETVDSIKLADK 124
Query: 143 LNRMVETM-GRKPLKVLVQVNTSGE 166
+N + + LK++VQVNTSGE
Sbjct: 125 VNSTWQKKNSSEKLKIMVQVNTSGE 149
>gi|440470131|gb|ELQ39217.1| hypothetical protein OOU_Y34scaffold00511g7 [Magnaporthe oryzae
Y34]
gi|440480109|gb|ELQ60804.1| hypothetical protein OOW_P131scaffold01234g15 [Magnaporthe oryzae
P131]
Length = 251
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 83/133 (62%), Gaps = 8/133 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEI 94
A+ LR+V +R+ AA+ RP +R+VAVSK KP + I ++ A GH FGENY QE+
Sbjct: 12 ASQLRAVTERLQSAAK--GRP---VRLVAVSKLKPANDILALHSAPVGHTHFGENYAQEL 66
Query: 95 VEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+KA LP ++WHFIG LQS K +A +PNL V SVD K A L+R G P
Sbjct: 67 SQKAQVLPRSIQWHFIGGLQSTHCKS-IAKIPNLWCVSSVDTLKKAQLLDRARGQAGEPP 125
Query: 155 LKVLVQVNTSGEE 167
L + VQVNTSGEE
Sbjct: 126 LNIHVQVNTSGEE 138
>gi|402224822|gb|EJU04884.1| hypothetical protein DACRYDRAFT_75873 [Dacryopinax sp. DJM-731 SS1]
Length = 265
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A+R+ I V +A + P+ +VAVSK K + YE G FGENYVQE++EKA
Sbjct: 23 AIRAKINVVVSSAGLGDKKPN---LVAVSKIKSAEDVMACYEDGQLHFGENYVQELIEKA 79
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+LP +++WHFIG LQSNK KP LA +PNL VE++D+ K A + + PL+V
Sbjct: 80 EKLPQEIKWHFIGALQSNKCKP-LASIPNLYAVETLDSIKKADVFQKSLPDARSIPLRVF 138
Query: 159 VQVNTSGEE 167
+Q+NTS EE
Sbjct: 139 IQINTSSEE 147
>gi|346470373|gb|AEO35031.1| hypothetical protein [Amblyomma maculatum]
Length = 247
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 87/136 (63%), Gaps = 8/136 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A AL+ V +++ A+ + P R+VAVSKTKP ++ Y G R FGENY+QE+VE
Sbjct: 11 ARALQLVREKITVAS--AGLPGPSPRLVAVSKTKPKELVIAAYNEGQRHFGENYIQELVE 68
Query: 97 KAAQ---LPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
KA L D ++WHFIG LQSNKV L +PNL MVE+++++K A LN + G
Sbjct: 69 KANNPEILRDCPQIKWHFIGRLQSNKVSK-LPKIPNLFMVETLESQKTADALNSAWTSSG 127
Query: 152 RKPLKVLVQVNTSGEE 167
PL V+VQVNTSGEE
Sbjct: 128 LPPLNVMVQVNTSGEE 143
>gi|389629198|ref|XP_003712252.1| YggS family pyridoxal phosphate enzyme [Magnaporthe oryzae 70-15]
gi|351644584|gb|EHA52445.1| YggS family pyridoxal phosphate enzyme [Magnaporthe oryzae 70-15]
Length = 258
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 83/133 (62%), Gaps = 8/133 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEI 94
A+ LR+V +R+ AA+ RP +R+VAVSK KP + I ++ A GH FGENY QE+
Sbjct: 19 ASQLRAVTERLQSAAK--GRP---VRLVAVSKLKPANDILALHSAPVGHTHFGENYAQEL 73
Query: 95 VEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+KA LP ++WHFIG LQS K +A +PNL V SVD K A L+R G P
Sbjct: 74 SQKAQVLPRSIQWHFIGGLQSTHCKS-IAKIPNLWCVSSVDTLKKAQLLDRARGQAGEPP 132
Query: 155 LKVLVQVNTSGEE 167
L + VQVNTSGEE
Sbjct: 133 LNIHVQVNTSGEE 145
>gi|194905647|ref|XP_001981231.1| GG11955 [Drosophila erecta]
gi|190655869|gb|EDV53101.1| GG11955 [Drosophila erecta]
Length = 254
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 82/117 (70%), Gaps = 11/117 (9%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFIGNL 113
R +VAVSKTKP + + YEAG R FGENYVQE+ EK+ PD D+ WHFIG++
Sbjct: 37 RPLLVAVSKTKPAEAVIEAYEAGQRDFGENYVQELEEKSRH-PDILAKCPDIRWHFIGHM 95
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV---ETMGRKPLKVLVQVNTSGEE 167
Q+NK+ +LA VPNL M+++VD+EK+A +L+ + +PL+VL+Q+NTSGE+
Sbjct: 96 QTNKINKVLA-VPNLRMIQTVDSEKLATKLDAAWSKRQPAPAEPLQVLIQINTSGED 151
>gi|423317317|ref|ZP_17295222.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum ATCC
43767]
gi|405581450|gb|EKB55479.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum ATCC
43767]
Length = 219
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ +++VAVSKT PV IRQ+Y+AG + FGEN VQE++ K LP D+EWH IG+LQ+NK
Sbjct: 15 PEAVQLVAVSKTHPVEKIRQIYDAGQKIFGENKVQELLSKYENLPSDIEWHLIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + P + ++SVD+EK+ +N+ + GR + VL+Q+ + E+ +G F C
Sbjct: 75 VKYI---APFIHTIQSVDSEKLLAEINKQAQLHGR-TITVLLQIKIAEEDTKFGMTFEDC 130
Query: 176 S 176
Sbjct: 131 D 131
>gi|406674206|ref|ZP_11081417.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum CCUG
30536]
gi|405584617|gb|EKB58507.1| YggS family pyridoxal phosphate enzyme [Bergeyella zoohelcum CCUG
30536]
Length = 219
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ +++VAVSKT PV IRQ+Y+AG + FGEN VQE++ K LP D+EWH IG+LQ+NK
Sbjct: 15 PEAVQLVAVSKTHPVEKIRQIYDAGQKIFGENKVQELLSKYENLPSDIEWHLIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + P + ++SVD+EK+ +N+ + GR + VL+Q+ + E+ +G F C
Sbjct: 75 VKYI---APFIHTIQSVDSEKLLAEINKQAQLHGR-TITVLLQIKIAEEDTKFGMTFEDC 130
Query: 176 S 176
Sbjct: 131 D 131
>gi|123455783|ref|XP_001315632.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898315|gb|EAY03409.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 227
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
+V VSKTKP+ ++QV+EAG R FGENYV EI+ K QLP D ++H IG+LQSNKV L
Sbjct: 26 LVCVSKTKPIEDLKQVFEAGGRIFGENYVDEIITKGPQLP-DAQFHMIGHLQSNKVAKLC 84
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
V NL M++S+D++++A ++++ + + RKPL+VL+Q+NTS E
Sbjct: 85 K-VENLVMIQSIDSKELATKVDK--QYVNRKPLEVLIQINTSAE 125
>gi|294659120|ref|XP_461459.2| DEHA2F25762p [Debaryomyces hansenii CBS767]
gi|202953632|emb|CAG89878.2| DEHA2F25762p [Debaryomyces hansenii CBS767]
Length = 249
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHF 109
+AE SS+P +R+VAVSK KP S I +Y G R FGENYVQE++ K+ +LP D++WHF
Sbjct: 30 SAEHSSKP---VRLVAVSKLKPSSDIMALYNHGVRHFGENYVQELIGKSQELPKDIKWHF 86
Query: 110 IGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
IG LQ+ K K L GV NL VE++D+ K +L + + + +Q+NTSGE+
Sbjct: 87 IGGLQTGKCKDLSKGVENLYAVEAIDSLKKCKKLESCRKNAEGNSINIYLQINTSGED 144
>gi|333891888|ref|YP_004465763.1| alanine racemase domain-containing protein [Alteromonas sp. SN2]
gi|332991906|gb|AEF01961.1| alanine racemase domain-containing protein [Alteromonas sp. SN2]
Length = 228
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S Q V A ++RPP+ ++++AVSKTKPVS I YE G R FGENY+QE V+
Sbjct: 5 AERLNSARQDVSLATANANRPPNSVKLLAVSKTKPVSDIMAAYEEGQRTFGENYIQEGVD 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGR 152
K QL D+EWH IG +QSNK K + N V+SVD EKIA RLN R E
Sbjct: 65 KIQQLSALSDIEWHMIGPIQSNKTKIV---AENFDWVQSVDREKIARRLNDQRPAEM--- 118
Query: 153 KPLKVLVQVNTSGE 166
PL V +QVN E
Sbjct: 119 APLNVCIQVNIDDE 132
>gi|255535460|ref|YP_003095831.1| hypothetical protein FIC_01321 [Flavobacteriaceae bacterium
3519-10]
gi|255341656|gb|ACU07769.1| FIG018583: protein of unknown function [Flavobacteriaceae bacterium
3519-10]
Length = 234
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIG 111
E+S+R PD + +VAVSKT P V++QVY+ G R FGEN VQE++ K QLP D++WH IG
Sbjct: 24 EQSARIPDGVELVAVSKTHPAEVVQQVYDLGQRIFGENKVQELIAKYPQLPKDIKWHIIG 83
Query: 112 NLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YG 169
+LQ+NKVK + P + V+SVD+EKI +++ RK + VL+QV + E+ YG
Sbjct: 84 HLQTNKVKYI---APFVDTVQSVDSEKILNEIDKQAAKCERK-INVLLQVKIAEEDTKYG 139
>gi|45550861|ref|NP_651776.2| CG1983 [Drosophila melanogaster]
gi|28316960|gb|AAO39501.1| RE46560p [Drosophila melanogaster]
gi|45446716|gb|AAF57017.2| CG1983 [Drosophila melanogaster]
gi|220948568|gb|ACL86827.1| CG1983-PA [synthetic construct]
gi|220957842|gb|ACL91464.1| CG1983-PA [synthetic construct]
Length = 254
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 93/142 (65%), Gaps = 17/142 (11%)
Query: 39 ALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
L+ V++R+ + + RP + R +VAVSKTKP + + YE G R FGENYVQE+
Sbjct: 14 GLQHVLKRIDEVLLQ--RPKEVQAARPLLVAVSKTKPAEAVIEAYEGGQRDFGENYVQEL 71
Query: 95 VEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV- 147
EK+ PD D+ WHFIG++QSNK+ +L+ VPNL M+++VD+EK+A +L+
Sbjct: 72 EEKSRH-PDILAKCPDIRWHFIGHMQSNKINKILS-VPNLHMIQTVDSEKLATKLDAAWS 129
Query: 148 --ETMGRKPLKVLVQVNTSGEE 167
+ +PL+VL+Q+NTSGE+
Sbjct: 130 KRQPTPEEPLQVLIQINTSGED 151
>gi|440739314|ref|ZP_20918831.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas
fluorescens BRIP34879]
gi|440379857|gb|ELQ16439.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas
fluorescens BRIP34879]
Length = 231
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R P I ++AVSKTKP +R+ Y AG R FGENY+QE + K AQL
Sbjct: 11 VSQRIRAAADAVQRDPSSIHLLAVSKTKPAEAVREAYAAGVRDFGENYLQEALSKQAQLS 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|213403758|ref|XP_002172651.1| alanine racemase [Schizosaccharomyces japonicus yFS275]
gi|212000698|gb|EEB06358.1| alanine racemase [Schizosaccharomyces japonicus yFS275]
Length = 240
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 14/154 (9%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
T L+S + +V + +++ D +R+VAVSK PV + + Y AG R FGENY+QE++
Sbjct: 2 TTPLQSRLAQVQGHVKAAAQGRD-VRLVAVSKFHPVESLMEAYNAGQRHFGENYMQELLA 60
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KA +P D+ WHFIG +QS+K K +A + NL +E+VD EK A +N E + KPL+
Sbjct: 61 KAQVMPKDVNWHFIGAMQSSKCKK-IASIENLWCIETVDTEKKARLINSAREELN-KPLR 118
Query: 157 VLVQVNTSGEEYGE----------C-FIKCSWSH 179
V VQVNTSGE+ C FIK S SH
Sbjct: 119 VYVQVNTSGEDNKSGVAPEDALPLCKFIKDSCSH 152
>gi|27364896|ref|NP_760424.1| hypothetical protein VV1_1525 [Vibrio vulnificus CMCP6]
gi|27361041|gb|AAO09951.1| protein of unknown function [Vibrio vulnificus CMCP6]
Length = 236
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 13/131 (9%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++H + ++ R D ++++AVSKTKPV I + Y AG R FGENYVQE VEK A
Sbjct: 11 ITTQIHDSTQKCGRARDSVQLLAVSKTKPVEAILEAYHAGQRAFGENYVQEGVEKVRFFA 70
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPL 155
Q P+ +EWHFIG +QSNK + L+A + A V ++D +KIA RLN R E PL
Sbjct: 71 EQHPEKSIEWHFIGPIQSNKSR-LVA--EHFAWVHTIDRDKIAQRLNDQRPAEL---PPL 124
Query: 156 KVLVQVNTSGE 166
+VL+QVNTSGE
Sbjct: 125 QVLIQVNTSGE 135
>gi|269101814|ref|ZP_06154511.1| hypothetical protein VDA_001230 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161712|gb|EEZ40208.1| hypothetical protein VDA_001230 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 233
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ VI + AA++ R D ++++AVSKTKP++ I + +AG FGENYVQE VEK
Sbjct: 8 IEQVISEIDAAAKKCGRTADSVQLLAVSKTKPIAAIEEAIQAGQFAFGENYVQEGVEKIE 67
Query: 100 QL-----PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
D L WHFIG LQSNK +P+ N V SVD KIA RLN T P
Sbjct: 68 HFRAHPQADALTWHFIGPLQSNKSRPV---AENFDWVHSVDRLKIAQRLNDQRPT-DLPP 123
Query: 155 LKVLVQVNTSGE 166
L VL+Q+NTSGE
Sbjct: 124 LNVLLQINTSGE 135
>gi|37681058|ref|NP_935667.1| TIM-barrel fold family protein [Vibrio vulnificus YJ016]
gi|37199808|dbj|BAC95638.1| predicted enzyme with a TIM-barrel fold [Vibrio vulnificus YJ016]
Length = 236
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 13/131 (9%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++H + ++ R D ++++AVSKTKPV I + Y AG R FGENYVQE VEK A
Sbjct: 11 ITTQIHDSTQKCGRARDSVQLLAVSKTKPVEAILEAYHAGQRAFGENYVQEGVEKVRFFA 70
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPL 155
Q P+ +EWHFIG +QSNK + L+A + A V ++D +KIA RLN R E PL
Sbjct: 71 EQHPEKSIEWHFIGPIQSNKSR-LVA--EHFAWVHTIDRDKIAQRLNDQRPAEL---PPL 124
Query: 156 KVLVQVNTSGE 166
+VL+QVNTSGE
Sbjct: 125 QVLIQVNTSGE 135
>gi|447918838|ref|YP_007399406.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas poae
RE*1-1-14]
gi|445202701|gb|AGE27910.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas poae
RE*1-1-14]
Length = 231
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R P I ++AVSKTKP +R+ Y AG R FGENY+QE + K AQL
Sbjct: 11 VSQRIRAAADAVQRDPSSIHLLAVSKTKPAEAVREAYAAGVRDFGENYLQEALSKQAQLS 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|228471405|ref|ZP_04056200.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas uenonis
60-3]
gi|228306779|gb|EEK15905.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas uenonis
60-3]
Length = 221
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 79/117 (67%), Gaps = 4/117 (3%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
AE S+ P ++++VAVSK PV +R+ YEAG R FGEN QE+ EKA QLP+D++WHFI
Sbjct: 7 AEIRSQIPAQVQLVAVSKFHPVESVREAYEAGQRLFGENRAQELAEKAPQLPEDIQWHFI 66
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
G LQ NKVK + VP ++++ESVD+E + + + R+ L++L+Q + EE
Sbjct: 67 GTLQRNKVKYI---VPYVSLIESVDSESLLQEIVKQANRFDRQ-LRILLQYKIAQEE 119
>gi|195341465|ref|XP_002037330.1| GM12173 [Drosophila sechellia]
gi|194131446|gb|EDW53489.1| GM12173 [Drosophila sechellia]
Length = 254
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 93/142 (65%), Gaps = 17/142 (11%)
Query: 39 ALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
L+ V++R+ + + RP + R +VAVSKTKP + + YE G R FGENYVQE+
Sbjct: 14 GLQHVLKRIDEVLVQ--RPKEVQAARPLLVAVSKTKPAEAVIEAYEDGQRDFGENYVQEL 71
Query: 95 VEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV- 147
EK+ PD D+ WHFIG++QSNK+ +L+ VPNL M+++VD+EK+A +L+
Sbjct: 72 EEKSRH-PDILAKCPDIRWHFIGHMQSNKINKILS-VPNLHMIQTVDSEKLATKLDAAWS 129
Query: 148 --ETMGRKPLKVLVQVNTSGEE 167
+ +PL+VL+Q+NTSGE+
Sbjct: 130 KRQPTPEEPLQVLIQINTSGED 151
>gi|196015285|ref|XP_002117500.1| hypothetical protein TRIADDRAFT_61518 [Trichoplax adhaerens]
gi|190580029|gb|EDV20116.1| hypothetical protein TRIADDRAFT_61518 [Trichoplax adhaerens]
Length = 254
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 89/138 (64%), Gaps = 10/138 (7%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +++QR+ A R S P R+VAVSKTKPV++I +E+G FGENYVQE+
Sbjct: 19 ARENILQRIEAAKLRRSAELPNIEPRLVAVSKTKPVNLIIDAFESGQTHFGENYVQELER 78
Query: 97 KAAQ------LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
KA ++WHFIG+LQSNK K LA +PNL VE+VD++K+A LN+ E+
Sbjct: 79 KANDEELLKATKGQIKWHFIGHLQSNKCKK-LAAIPNLDTVETVDSKKLADCLNKAWESA 137
Query: 151 GR-KPLKVLVQVNTSGEE 167
G+ + L ++VQVNTS EE
Sbjct: 138 GKLEQLNIMVQVNTSQEE 155
>gi|365121999|ref|ZP_09338907.1| YggS family pyridoxal phosphate enzyme [Tannerella sp.
6_1_58FAA_CT1]
gi|363643544|gb|EHL82859.1| YggS family pyridoxal phosphate enzyme [Tannerella sp.
6_1_58FAA_CT1]
Length = 223
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 87/134 (64%), Gaps = 12/134 (8%)
Query: 44 IQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD 103
I+RV Q P +R+VAVSK PV +IR+ Y+AG R FGE+ VQE++ K LP+
Sbjct: 8 IERVKQTL------PSGVRLVAVSKFHPVEMIREAYDAGQRLFGESKVQELLSKKPVLPE 61
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNT 163
D+EWHFIG+LQ+NKVK + VP ++M+ S D+ K+ +N+ E +GR + L+Q++
Sbjct: 62 DIEWHFIGHLQTNKVKQI---VPFVSMIHSADSPKLLQEINKTAENVGR-VVSCLLQIHI 117
Query: 164 SGEE--YGECFIKC 175
+ EE +G F +C
Sbjct: 118 AREESKFGFSFEEC 131
>gi|401399845|ref|XP_003880649.1| hypothetical protein NCLIV_010840 [Neospora caninum Liverpool]
gi|325115060|emb|CBZ50616.1| hypothetical protein NCLIV_010840 [Neospora caninum Liverpool]
Length = 326
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 77/113 (68%), Gaps = 5/113 (4%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKV 118
++RI+AVSK P + + +AG R FGENYVQE+V+KAAQL + DLEWH IG+LQSNKV
Sbjct: 54 KVRILAVSKHHPAAAVAAAAQAGQRHFGENYVQELVDKAAQLRELDLEWHMIGHLQSNKV 113
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETM----GRKPLKVLVQVNTSGEE 167
K LL P L VE+VD++K+A LN + PL+VLVQVN S EE
Sbjct: 114 KQLLTACPRLYAVETVDSKKLAKTLNDAAAAVLPQRNGAPLRVLVQVNASDEE 166
>gi|444428097|ref|ZP_21223450.1| hypothetical protein B878_19100 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444238663|gb|ELU50258.1| hypothetical protein B878_19100 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 236
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRSPESVQLLAVSKTKPVEAILEAYQAGQEAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V ++D KIA RLN + KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPSE-LKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|336450192|ref|ZP_08620648.1| pyridoxal phosphate enzyme, YggS family [Idiomarina sp. A28L]
gi|336283010|gb|EGN76220.1| pyridoxal phosphate enzyme, YggS family [Idiomarina sp. A28L]
Length = 237
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T V Q++ AAE ++R D I ++AVSKTKP S I ++Y AG R FGENYVQE ++K
Sbjct: 14 THFAEVKQQIKHAAEAANRSIDSIALLAVSKTKPASAIAELYGAGQRQFGENYVQEALDK 73
Query: 98 AAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
+L + D+ WHFIG LQSNK K + N V S+D EK+ RLN R PL
Sbjct: 74 ITELHELTDIIWHFIGPLQSNKTKDV---AENFDWVHSIDREKLVRRLNDQ-RPAKRGPL 129
Query: 156 KVLVQVNTSGE 166
+L+QVN E
Sbjct: 130 NILIQVNIDNE 140
>gi|19114789|ref|NP_593877.1| alanine racemase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74625289|sp|Q9P6Q1.1|YKC9_SCHPO RecName: Full=UPF0001 protein C644.09
gi|7708588|emb|CAB90136.1| alanine racemase (predicted) [Schizosaccharomyces pombe]
Length = 237
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ +VAVSK PV + + Y AG R FGENY+QE ++K +PDD++WHFIG+LQS+K K
Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK 83
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+A V NL +E++D EK A +N E + + PL V +QVNTSGEE
Sbjct: 84 -IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEE 128
>gi|226942470|ref|YP_002797543.1| alanine racemase domain-containing protein [Azotobacter vinelandii
DJ]
gi|226717397|gb|ACO76568.1| alanine racemase domain protein [Azotobacter vinelandii DJ]
Length = 234
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ S R P +R++AVSKTKP SV+R+ + G R FGENY+QE + K A+L D +
Sbjct: 14 RIREAAQASGRDPQNVRLLAVSKTKPASVLREAFACGQRDFGENYLQEALAKQAELADLE 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
L WHFIG +QSNK + + + A V SVD KIA RL+ PL + +QVN S
Sbjct: 74 LTWHFIGPIQSNKTRAI---AEHFAWVHSVDRAKIAQRLSEQ-RPAHLPPLNICLQVNVS 129
Query: 165 GE 166
GE
Sbjct: 130 GE 131
>gi|153835263|ref|ZP_01987930.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|388602658|ref|ZP_10161054.1| hypothetical protein VcamD_22510 [Vibrio campbellii DS40M4]
gi|148868238|gb|EDL67378.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 236
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRSPESVQLLAVSKTKPVEAILEAYQAGQEAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V ++D KIA RLN + KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPSE-LKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|424031938|ref|ZP_17771361.1| hypothetical protein VCHENC01_0164 [Vibrio cholerae HENC-01]
gi|408876648|gb|EKM15759.1| hypothetical protein VCHENC01_0164 [Vibrio cholerae HENC-01]
Length = 236
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRAPESVQLLAVSKTKPVEAILEAYQAGQEAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V ++D KIA RLN + KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPSE-LKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|322420078|ref|YP_004199301.1| alanine racemase domain-containing protein [Geobacter sp. M18]
gi|320126465|gb|ADW14025.1| alanine racemase domain protein [Geobacter sp. M18]
Length = 231
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 4/134 (2%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G A LR + +R+ QAA R+ R P +R+VAVSKTKP + I + G R FGENYVQE
Sbjct: 2 GEMAERLRKIEERIAQAALRAGRDPQSVRLVAVSKTKPAAAIADAFACGQRIFGENYVQE 61
Query: 94 IVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
+V K +L ++ WHFIG+LQSNKV+ + V ++ SVD +A ++R +G K
Sbjct: 62 LVGKQGELTQEISWHFIGSLQSNKVRQIAGRVD---LIHSVDRSSLAREIDRQWGALG-K 117
Query: 154 PLKVLVQVNTSGEE 167
+LVQVN S EE
Sbjct: 118 VCDILVQVNISREE 131
>gi|357017103|gb|AET50580.1| hypothetical protein [Eimeria tenella]
Length = 319
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
++AVSKT P + + GHR FGENYV E+VEKA +LP+D WH IG LQ+NKVK L+
Sbjct: 104 LIAVSKTHPPAAVAAAAATGHRHFGENYVAELVEKAQKLPEDYHWHLIGKLQTNKVKTLV 163
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECFIKCSWSHS 180
AGV NL V+SVD+ ++A L R + R L VLVQVN GE + W+ +
Sbjct: 164 AGVRNLYSVDSVDSVRLAEVLQRETKKANRH-LNVLVQVNAGGEPQKNGVLGDDWNST 220
>gi|401626718|gb|EJS44643.1| YBL036C [Saccharomyces arboricola H-6]
Length = 257
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 26 MAASAATDGVAATAL----RSVIQRVHQAAERSSRPPD--RIRIVAVSKTKPVSVIRQVY 79
M+ + A D V T L S+ + V AE++ D + I+ VSK KP S I+ +Y
Sbjct: 1 MSTNIAYDEVRKTELIAQYESIRKIVRTEAEKAHDDKDSSEVSILVVSKLKPASDIKILY 60
Query: 80 EAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
+ G R FGENYVQE++EKA LP D++WHFIG LQ+NK K LA VPNL VE+VD+ K
Sbjct: 61 DHGVRDFGENYVQELIEKAILLPGDIKWHFIGGLQTNKCKD-LAKVPNLYCVETVDSLKK 119
Query: 140 AGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
A +LN R P+ VQ+NTS E+
Sbjct: 120 AKKLNESRAKFQPDCDPISCNVQINTSHED 149
>gi|423208133|ref|ZP_17194687.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AER397]
gi|404619180|gb|EKB16096.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AER397]
Length = 233
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAAER+SR +IR++AVSKTKPV I + AG RCFGE+Y QE
Sbjct: 5 AQHLFQVKERIAQAAERASRNLQQIRLLAVSKTKPVEAIMAAHAAGQRCFGESYAQEAAA 64
Query: 97 KAAQL---PD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L P+ D+EWHFIG LQSNK K L+A V+SVD +K+ RLN T
Sbjct: 65 KIDTLRQQPEYSDIEWHFIGPLQSNKSK-LVA--ERFDWVQSVDRDKLIDRLNNQRPTT- 120
Query: 152 RKPLKVLVQVNTSGE 166
PL V +Q+N SGE
Sbjct: 121 MAPLNVCLQINISGE 135
>gi|237841025|ref|XP_002369810.1| proline synthetase co-transcribed protein, putative [Toxoplasma
gondii ME49]
gi|211967474|gb|EEB02670.1| proline synthetase co-transcribed protein, putative [Toxoplasma
gondii ME49]
Length = 350
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 5/111 (4%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVK 119
+R++AVSK +P S + AG R FGENYVQE+VEKA QL DL+WH IG+LQSNK K
Sbjct: 70 VRLLAVSKYQPASAVAAAALAGQRHFGENYVQELVEKATQLCHLDLKWHMIGHLQSNKAK 129
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM----GRKPLKVLVQVNTSGE 166
LL G P L VE+VD++K+A LN V T+ PL+VLVQVN S E
Sbjct: 130 QLLMGCPQLYAVETVDSKKLAKTLNDAVATVLSQRNGAPLRVLVQVNASDE 180
>gi|195575019|ref|XP_002105480.1| GD17245 [Drosophila simulans]
gi|194201407|gb|EDX14983.1| GD17245 [Drosophila simulans]
Length = 270
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 81/117 (69%), Gaps = 11/117 (9%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFIGNL 113
R +VAVSKTKP + + YE G R FGENYVQE+ EK+ PD D+ WHFIG++
Sbjct: 37 RPLLVAVSKTKPAEAVIEAYEDGQRDFGENYVQELEEKSRH-PDILAKCPDIRWHFIGHM 95
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV---ETMGRKPLKVLVQVNTSGEE 167
QSNK+ +L+ VPNL M+++VD+EK+A +L+ + +PL+VL+Q+NTSGE+
Sbjct: 96 QSNKINKILS-VPNLHMIQTVDSEKLATKLDAAWSKRQPTPEEPLQVLIQINTSGED 151
>gi|330831214|ref|YP_004394166.1| alanine racemase domain-containing protein [Aeromonas veronii B565]
gi|328806350|gb|AEB51549.1| Alanine racemase domain protein [Aeromonas veronii B565]
Length = 233
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 83/135 (61%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAAER+SR +IR++AVSKTKPV I + AG RCFGE+Y QE
Sbjct: 5 AQHLFQVKERIAQAAERASRNLQQIRLLAVSKTKPVEAIMAAHAAGQRCFGESYAQEAAA 64
Query: 97 KAAQL---PD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L P+ D+EWHFIG LQSNK K L+A V+SVD +K+ RLN T
Sbjct: 65 KIDTLRQQPEYSDIEWHFIGPLQSNKSK-LVA--ERFDWVQSVDRDKLIDRLNNQRPTT- 120
Query: 152 RKPLKVLVQVNTSGE 166
PL V +Q+N SGE
Sbjct: 121 MAPLNVCLQINISGE 135
>gi|170072194|ref|XP_001870118.1| proline synthetase associated protein [Culex quinquefasciatus]
gi|167868284|gb|EDS31667.1| proline synthetase associated protein [Culex quinquefasciatus]
Length = 253
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 95/148 (64%), Gaps = 18/148 (12%)
Query: 33 DGVAATAL---RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGEN 89
+ +AA L RS +Q + ++ +P +VAVSKTKPV +I Y G R FGEN
Sbjct: 6 ESLAAVGLAIQRSSVQTLGWKTIKAPKP----LLVAVSKTKPVDLILDGYSIGQRDFGEN 61
Query: 90 YVQEIVEKA--AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN 144
YVQE++EKA A++ + D++WHFIG+LQSNK+ ++ +PNL M+E+V N K+A LN
Sbjct: 62 YVQELIEKAHDAKILEHCKDIQWHFIGHLQSNKINKIV-NLPNLYMIETVHNAKLAENLN 120
Query: 145 RMVETM-GRKP----LKVLVQVNTSGEE 167
+ E + KP L VL+Q+NTSGE+
Sbjct: 121 KAWEKVKADKPDSSKLNVLIQINTSGED 148
>gi|221483679|gb|EEE21991.1| proline synthetase associated protein, putative [Toxoplasma gondii
GT1]
Length = 349
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 5/111 (4%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVK 119
+R++AVSK +P S + AG R FGENYVQE+VEKA QL DL+WH IG+LQSNK K
Sbjct: 69 VRLLAVSKYQPASAVAAAALAGQRHFGENYVQELVEKATQLCHLDLKWHMIGHLQSNKAK 128
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM----GRKPLKVLVQVNTSGE 166
LL G P L VE+VD++K+A LN V T+ PL+VLVQVN S E
Sbjct: 129 QLLMGCPQLYAVETVDSKKLAKTLNDAVATVLSQRNGAPLRVLVQVNASDE 179
>gi|297626139|ref|YP_003687902.1| alanine racemase [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921904|emb|CBL56464.1| alanine racemase [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 250
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 91/137 (66%), Gaps = 14/137 (10%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQV-----YEAG---HRCFGENYV 91
+R V+ V A ER+ R P R+R++ VSKT P+ +RQV +AG HR FGEN+V
Sbjct: 14 VRGVLAGVTDACERAGRDPARVRLLPVSKTHPIEAVRQVNGALERQAGHVPHRLFGENHV 73
Query: 92 QEIVEKAAQL--PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
QEIV K +L DD + IG+LQSNKV +AG+ + +++D+ K+AGRL+R + T
Sbjct: 74 QEIVAKTDELRPDDDFGFALIGHLQSNKVNA-VAGL--IDEFQALDSLKLAGRLDRRLNT 130
Query: 150 MGRKPLKVLVQVNTSGE 166
+GR L+VLV+VNTSGE
Sbjct: 131 LGRG-LRVLVEVNTSGE 146
>gi|343492470|ref|ZP_08730834.1| hypothetical protein VINI7043_12901 [Vibrio nigripulchritudo ATCC
27043]
gi|342827135|gb|EGU61532.1| hypothetical protein VINI7043_12901 [Vibrio nigripulchritudo ATCC
27043]
Length = 236
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
++ + ++ E+ R ++++AVSKTKP + I + EAG FGENYVQE V+K
Sbjct: 8 IKQITAQIRSLEEKCGRASGSVQLLAVSKTKPNAAIAEALEAGQVAFGENYVQEGVDKVQ 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ D+EWHFIG +QSNK +P+ N A V SVD KIA RLN G P
Sbjct: 68 YFTEHYSDKDIEWHFIGPIQSNKTRPI---AENFAWVHSVDRAKIAQRLNDQ-RPEGMAP 123
Query: 155 LKVLVQVNTSGE 166
L VL+QVNTSGE
Sbjct: 124 LNVLIQVNTSGE 135
>gi|426256570|ref|XP_004021913.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein [Ovis aries]
Length = 256
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 9/118 (7%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFI 110
P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ P +++WHFI
Sbjct: 17 PAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASN-PQILSSCPEIKWHFI 75
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
G+LQ V L+A VPNL+M+E+VD+ K+A R+N + G LKV+VQ+NTSGEE
Sbjct: 76 GHLQKQNVNKLMA-VPNLSMLETVDSVKLADRVNSAWQKKGSPERLKVMVQINTSGEE 132
>gi|83648989|ref|YP_437424.1| TIM-barrel fold family protein [Hahella chejuensis KCTC 2396]
gi|83637032|gb|ABC32999.1| predicted enzyme with a TIM-barrel fold [Hahella chejuensis KCTC
2396]
Length = 227
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +++V QR+ A + ++RP D + ++AVSKTKP IR Y+AG R FGENY+QE +
Sbjct: 5 ADNIKTVSQRIQNATKSAARPADSVTLLAVSKTKPAEAIRAAYDAGLRDFGENYLQEAQD 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K AQL + + WHFIG LQSNK +P+ V ++D EKIA RL+ G PL
Sbjct: 65 KIAQLSNLAITWHFIGPLQSNKTRPV---AELFQWVHTLDREKIARRLSEQ-RPEGTPPL 120
Query: 156 KVLVQVNTSGE 166
V +QVN + E
Sbjct: 121 NVCIQVNINDE 131
>gi|399907807|ref|ZP_10776359.1| hypothetical protein HKM-1_00025 [Halomonas sp. KM-1]
Length = 236
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 86/138 (62%), Gaps = 8/138 (5%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
TD + + +L S +R+ A + R PD R++AVSKTKP +IR+ ++ G R FGENYV
Sbjct: 2 TDTMLSESLASARRRLATALSAAGRTPDAARLLAVSKTKPAGMIREAWQLGQREFGENYV 61
Query: 92 QEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVE 148
QE +EK +L D + WHFIG LQ+NK + A + V SVD KIA RLN + E
Sbjct: 62 QEALEKQTELADLKGIVWHFIGPLQANKTR---AVAEHFDWVHSVDRVKIARRLNDQRPE 118
Query: 149 TMGRKPLKVLVQVNTSGE 166
+G PL+V +QVN SGE
Sbjct: 119 ALG--PLEVCLQVNVSGE 134
>gi|348030149|ref|YP_004872835.1| alanine racemase [Glaciecola nitratireducens FR1064]
gi|347947492|gb|AEP30842.1| alanine racemase domain protein [Glaciecola nitratireducens FR1064]
Length = 229
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 83/133 (62%), Gaps = 6/133 (4%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L SV ++ Q A ++ R P+ I ++AVSKTKPVS I YEAGHR FGENYVQE V+
Sbjct: 6 AENLLSVHAQIKQCAVQAGRDPNNIELLAVSKTKPVSDIVLAYEAGHRSFGENYVQEGVD 65
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
K A+L D+ WHFIG LQSNK + L+A N + SVD KIA RL+ KP
Sbjct: 66 KIAELKHLTDISWHFIGPLQSNKSR-LVA--ENFDWMHSVDRYKIAKRLHEQRPHYA-KP 121
Query: 155 LKVLVQVNTSGEE 167
L + +Q+N EE
Sbjct: 122 LNICIQINIDEEE 134
>gi|387126575|ref|YP_006295180.1| pyridoxal phosphate enzyme [Methylophaga sp. JAM1]
gi|386273637|gb|AFI83535.1| pyridoxal phosphate enzyme [Methylophaga sp. JAM1]
Length = 232
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 5/130 (3%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T L+SV+ + A ++++RPP ++++AVSKT P S +R++ EAG FGENY+QE ++K
Sbjct: 6 TRLQSVMNFIKLAEQQANRPPGLVKLLAVSKTWPASRLRELAEAGQTRFGENYLQEALQK 65
Query: 98 AAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
A+L D +LEWHFIG +QSNK + + A N VESVD KIA RL+ T + PL
Sbjct: 66 IAELADLNLEWHFIGPVQSNKTRDIAA---NFDWVESVDRLKIAQRLSDQRPT-EKPPLN 121
Query: 157 VLVQVNTSGE 166
+ +QVN E
Sbjct: 122 ICLQVNIDDE 131
>gi|422647629|ref|ZP_16710757.1| hypothetical protein PMA4326_21764 [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961171|gb|EGH61431.1| hypothetical protein PMA4326_21764 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 228
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
QR+ AA + R P I ++AVSKTKP S +R+ Y AG R FGENY+QE + K A+L D
Sbjct: 13 QRIRDAALAADRDPASIGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALAKQAELSDL 72
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNT 163
L WHFIG +QSNK + + N A V SVD KIA RL+ G +PL + +QVN
Sbjct: 73 PLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEGLEPLNICIQVNV 128
Query: 164 SGE 166
SGE
Sbjct: 129 SGE 131
>gi|452839676|gb|EME41615.1| hypothetical protein DOTSEDRAFT_90415 [Dothistroma septosporum
NZE10]
Length = 267
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAG--HRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
+R++AVSK KP + I V+E+ H+ FGENY E++EKA LP + WH IG LQ+NK
Sbjct: 42 VRLIAVSKLKPATDILAVHESDTRHKDFGENYSDELIEKAGLLPKSIRWHMIGGLQTNKC 101
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNR----MVETMG-RKPLKVLVQVNTSGEE 167
KPL + VPNL V SVD K A L + + ET + L+VLVQVNTSGEE
Sbjct: 102 KPLASKVPNLWCVSSVDTAKKANELEKGRKSLAETASLTEKLRVLVQVNTSGEE 155
>gi|417853470|ref|ZP_12498847.1| hypothetical protein AAUPMG_00684 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338219466|gb|EGP05119.1| hypothetical protein AAUPMG_00684 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 233
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 66
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 67 YFAQKNIPLEWHFIGPLQSNKTK-LVA--EHFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 123 VLIQINISDED 133
>gi|421262825|ref|ZP_15713910.1| hypothetical protein KCU_00614 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401690238|gb|EJS85519.1| hypothetical protein KCU_00614 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 233
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 66
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 67 YFAQKNIPLEWHFIGPLQSNKTK-LVA--EHFDWLQTLDRKKIADRLNEQ-RPHYKKPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 123 VLIQINISDED 133
>gi|423203500|ref|ZP_17190078.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AER39]
gi|404612795|gb|EKB09852.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AER39]
Length = 233
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 82/135 (60%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAAER+SR +IR++AVSKTKPV I + AG RCFGE+Y QE
Sbjct: 5 AQHLFQVKERIAQAAERASRNLQQIRLLAVSKTKPVEAIMAAHAAGQRCFGESYAQEAAS 64
Query: 97 KAAQL---PD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L P+ D+EWHFIG LQSNK K L+A V+SVD +K+ RLN
Sbjct: 65 KIDTLRQQPEYCDIEWHFIGPLQSNKSK-LVA--ERFDWVQSVDRDKLIDRLNNQ-RPAS 120
Query: 152 RKPLKVLVQVNTSGE 166
PL V +Q+N SGE
Sbjct: 121 MAPLNVCLQINISGE 135
>gi|15601977|ref|NP_245049.1| hypothetical protein PM0112 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|34223056|sp|Q9CPD5.1|Y112_PASMU RecName: Full=UPF0001 protein PM0112
gi|12720324|gb|AAK02196.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 233
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 66
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 67 YFAQKNIPLEWHFIGPLQSNKTK-LVA--EHFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 123 VLIQINISDED 133
>gi|170065074|ref|XP_001867791.1| proline synthetase co-transcribed protein-like protein [Culex
quinquefasciatus]
gi|167882213|gb|EDS45596.1| proline synthetase co-transcribed protein-like protein [Culex
quinquefasciatus]
Length = 337
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 95/142 (66%), Gaps = 15/142 (10%)
Query: 39 ALRSVIQRVHQA-AERSS--RPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
+R + ++ +A A+RS + P + +VAVSKTKPV +I Y G R FGENYVQE++
Sbjct: 93 GIRQALAKIDEAFAKRSETIKAPKPL-LVAVSKTKPVDLILDGYSIGQRDFGENYVQELI 151
Query: 96 EKA--AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
EKA A++ + D++WHFIG+LQSNK+ ++ +PNL M+E+V N K+A LN+ E +
Sbjct: 152 EKAHDAKILEHCKDIQWHFIGHLQSNKINKIV-NLPNLYMIETVHNAKLAENLNKAWEKV 210
Query: 151 -GRKP----LKVLVQVNTSGEE 167
KP L VL+Q+NTSGE+
Sbjct: 211 KADKPDSSKLNVLIQINTSGED 232
>gi|350532457|ref|ZP_08911398.1| hypothetical protein VrotD_15079 [Vibrio rotiferianus DAT722]
Length = 236
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRSPESVQLLAVSKTKPVEAILEAYQAGQIAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V ++D KIA RLN + KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS-ELKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|84872187|ref|NP_001034167.1| proline synthase co-transcribed bacterial homolog protein isoform c
[Mus musculus]
gi|29126929|gb|AAH47992.1| Proline synthetase co-transcribed [Mus musculus]
Length = 141
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 39 ALRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
ALR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENY+
Sbjct: 16 ALRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYI----- 70
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKPL 155
+ P +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G +PL
Sbjct: 71 -LSSCP-EIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPL 127
Query: 156 KVLVQVNTSGEE 167
KV+VQ+NTSGE+
Sbjct: 128 KVMVQINTSGED 139
>gi|417852367|ref|ZP_12497957.1| hypothetical protein GEW_00779 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338216911|gb|EGP02850.1| hypothetical protein GEW_00779 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 233
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 7 LAQIQQSIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 66
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 67 YFAQKNIPLEWHFIGPLQSNKTK-LVA--EHFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 123 VLIQINISDED 133
>gi|386834786|ref|YP_006240103.1| hypothetical protein [Pasteurella multocida subsp. multocida str.
3480]
gi|385201489|gb|AFI46344.1| hypothetical protein NT08PM_1224 [Pasteurella multocida subsp.
multocida str. 3480]
Length = 236
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 10 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 69
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 70 YFAQKNIPLEWHFIGPLQSNKTK-LVAE--HFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 125
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 126 VLIQINISDED 136
>gi|378774819|ref|YP_005177062.1| alanine racemase family protein [Pasteurella multocida 36950]
gi|356597367|gb|AET16093.1| alanine racemase family protein [Pasteurella multocida 36950]
Length = 233
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 66
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 67 YFAQKNIPLEWHFIGPLQSNKTK-LVA--EHFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 123 VLIQINISDED 133
>gi|425064875|ref|ZP_18467995.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like PROSC [Pasteurella multocida subsp.
gallicida P1059]
gi|404384590|gb|EJZ81023.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like PROSC [Pasteurella multocida subsp.
gallicida P1059]
Length = 236
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 10 LAQIQQSIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 69
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 70 YFAQKNIPLEWHFIGPLQSNKTK-LVAE--HFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 125
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 126 VLIQINISNED 136
>gi|344229250|gb|EGV61136.1| hypothetical protein CANTEDRAFT_116461 [Candida tenuis ATCC 10573]
gi|344229251|gb|EGV61137.1| hypothetical protein CANTEDRAFT_116461 [Candida tenuis ATCC 10573]
Length = 249
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
++ +V + A R++ ++ +VAVSK KP S I +Y G R FGENYVQE+ KA++LP
Sbjct: 21 ILNKVKEVALRAASA--QVELVAVSKLKPSSDILTLYNHGVRHFGENYVQELTTKASELP 78
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D++WHFIG+LQ++K K L + NL VE++D+ K +LN + + + V +Q+N
Sbjct: 79 KDIKWHFIGSLQTDKCKVLAKNIENLHAVETIDSLKKCKKLNTHRQEVNGAVINVYLQIN 138
Query: 163 TSGEEYGECF 172
TSGE+ F
Sbjct: 139 TSGEDQKSGF 148
>gi|425062793|ref|ZP_18465918.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Pasteurella multocida
subsp. gallicida X73]
gi|404383499|gb|EJZ79950.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Pasteurella multocida
subsp. gallicida X73]
Length = 236
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 10 LAQIQQSIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 69
Query: 99 --AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
AQ LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 70 YFAQKNIPLEWHFIGPLQSNKTK-LVAE--HFDWMQTLDRKKIADRLNEQ-RPHYKKPLN 125
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 126 VLIQINISDED 136
>gi|187607726|ref|NP_001119881.1| proline synthase co-transcribed bacterial homolog protein [Danio
rerio]
gi|169642405|gb|AAI60662.1| Prosc protein [Danio rerio]
Length = 283
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 93/142 (65%), Gaps = 19/142 (13%)
Query: 40 LRSVIQRVHQAAERSSR-----PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
+++V++RV+QA R + PP R+VAVSKTKP ++ + Y+ G R FGENYV E+
Sbjct: 15 VQAVVERVNQAVSRRPKTLPCIPP---RLVAVSKTKPPEMVVEAYKHGQRNFGENYVNEL 71
Query: 95 VEKAAQLPD------DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN---R 145
VEKA+ P +++WHFIG+LQ V LL GVPNL MVE++D+ K+A ++N +
Sbjct: 72 VEKASN-PQILSSCPEIKWHFIGHLQKGNVNKLL-GVPNLYMVETIDSVKLAEKVNSSWQ 129
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
+ LK++VQ+NTSGE+
Sbjct: 130 KLRAANTHRLKIMVQINTSGED 151
>gi|308161351|gb|EFO63803.1| PLP dependent protein [Giardia lamblia P15]
Length = 220
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 81/108 (75%), Gaps = 6/108 (5%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK--AAQ-LPDDLEWHFIGNLQSNKV 118
++VAVSKTKPV I + Y AG R FGENYVQE+V+K A Q + +D+EWHFIG+LQ+NK
Sbjct: 19 KLVAVSKTKPVEAILEAYAAGQRLFGENYVQELVKKTRAVQNVANDIEWHFIGHLQTNKA 78
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ +A +PN +V++VD++K+A RL+ + PL+V++Q+NTSGE
Sbjct: 79 RD-IASIPN-CVVQTVDSDKLARRLSDL-RPGDLDPLRVMIQINTSGE 123
>gi|377819813|ref|YP_004976184.1| alanine racemase [Burkholderia sp. YI23]
gi|357934648|gb|AET88207.1| alanine racemase domain protein [Burkholderia sp. YI23]
Length = 231
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ +AAE +SR + ++AVSKT P + +R +EAG R FGENYVQE + K A
Sbjct: 7 LEEVRQRIAKAAEGASRDASSVALLAVSKTFPANDVRAAFEAGQRAFGENYVQEGLAKIA 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D ++EWHFIG LQSNK K L+A V S+D KIA RL+ G KPL
Sbjct: 67 SLADLRGEIEWHFIGPLQSNKTK-LVA--EQFDWVHSIDRLKIAERLSAQ-RPEGAKPLN 122
Query: 157 VLVQVNTSGE 166
V VQ N SGE
Sbjct: 123 VCVQANVSGE 132
>gi|348554243|ref|XP_003462935.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 2 [Cavia porcellus]
Length = 141
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 15/146 (10%)
Query: 27 AASAATDGVAATALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAG 82
A S + + ALR+V +RV QA R RP D + R+VAVSKTKP ++ + Y G
Sbjct: 4 AGSMSAELGIGFALRTVNERVQQAVAR--RPQDLPAIQPRLVAVSKTKPAELVIEAYSHG 61
Query: 83 HRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGR 142
R FGENYV + P +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A R
Sbjct: 62 QRTFGENYV------LSSCP-EIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADR 113
Query: 143 LNRMVETMGR-KPLKVLVQVNTSGEE 167
+N + G + LKV+VQ+NTSGEE
Sbjct: 114 VNNSWQKKGSPEKLKVMVQINTSGEE 139
>gi|374997218|ref|YP_004972717.1| pyridoxal phosphate enzyme, YggS family [Desulfosporosinus orientis
DSM 765]
gi|357215584|gb|AET70202.1| pyridoxal phosphate enzyme, YggS family [Desulfosporosinus orientis
DSM 765]
Length = 232
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 4/125 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ QAA+RS+R P IR++AVSKT+P+S + + Y+ G R F EN VQE +EKA+
Sbjct: 11 LLEVRQRICQAAKRSNRDPSTIRLLAVSKTQPISGLEEAYQTGQRAFAENRVQEWLEKAS 70
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP+D EWH IG LQ+NKVK L +AM+ S+D + LNR E + LV
Sbjct: 71 ILPEDCEWHLIGRLQTNKVKYL---NHKIAMIHSLDRFPLLETLNRHGEKLN-ITWTALV 126
Query: 160 QVNTS 164
QVN +
Sbjct: 127 QVNVA 131
>gi|307132430|ref|YP_003884446.1| hypothetical protein Dda3937_02601 [Dickeya dadantii 3937]
gi|306529959|gb|ADM99889.1| predicted enzyme [Dickeya dadantii 3937]
Length = 244
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 85/147 (57%), Gaps = 9/147 (6%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
M S T V L+ V QR+ AAER R P+ I ++AVSKTKPVS I + AG R
Sbjct: 1 MTISTVTTSVVQQNLQDVRQRISAAAERCGRAPEEITLLAVSKTKPVSAIEEAIAAGQRA 60
Query: 86 FGENYVQEIVEK-----AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIA 140
FGENYVQE V+K AAQ LEWHFIG LQSNK + L+A + ++D +IA
Sbjct: 61 FGENYVQEGVDKVRHFQAAQPDTQLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIA 117
Query: 141 GRLNRMVETMGRKPLKVLVQVNTSGEE 167
RL+ PL VL+QVN S E+
Sbjct: 118 QRLSEQ-RPAHLPPLNVLLQVNISQEQ 143
>gi|253577873|ref|ZP_04855145.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850191|gb|EES78149.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 192
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 10/134 (7%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V + + +A + + R P + ++AVSKTKPV ++++ Y+AG R FGEN VQEIV+
Sbjct: 3 ADKLNLVKKNIEEACDTAGRSPQEVTLIAVSKTKPVEMLKEAYDAGARVFGENKVQEIVD 62
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-- 154
K Q+P D++WH IG+LQ NKVK ++ V +M+ SVD + RL +E K
Sbjct: 63 KYDQMPSDVQWHMIGHLQRNKVKYIIDKV---SMIHSVD----SVRLAEAIEKEAAKKDI 115
Query: 155 -LKVLVQVNTSGEE 167
+ VL++VN +GEE
Sbjct: 116 CMPVLIEVNVAGEE 129
>gi|126175227|ref|YP_001051376.1| alanine racemase domain-containing protein [Shewanella baltica
OS155]
gi|125998432|gb|ABN62507.1| alanine racemase domain protein [Shewanella baltica OS155]
Length = 232
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE EK L +
Sbjct: 13 RRIAQAAQKCARQPSSIRLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKITALKED 72
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL V +
Sbjct: 73 FPDIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIAQRLNDQRPAEL---APLNVCI 126
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 127 QINISAED 134
>gi|423204101|ref|ZP_17190657.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AMC34]
gi|404628095|gb|EKB24883.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AMC34]
Length = 233
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 82/135 (60%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAAER+SR +IR++AVSKTKPV I + AG RCFGE+Y QE
Sbjct: 5 AQHLFQVKERIAQAAERASRNLQQIRLLAVSKTKPVEAIMAAHAAGQRCFGESYAQEAAA 64
Query: 97 KAAQL---PD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L P+ D+EWHFIG LQSNK K L+A V+SVD +K+ RLN
Sbjct: 65 KIDTLRQQPEYSDIEWHFIGPLQSNKSK-LVA--ERFDWVQSVDRDKLIDRLNNQ-RPAS 120
Query: 152 RKPLKVLVQVNTSGE 166
PL V +Q+N SGE
Sbjct: 121 MAPLNVCLQINISGE 135
>gi|386341979|ref|YP_006038345.1| hypothetical protein [Shewanella baltica OS117]
gi|334864380|gb|AEH14851.1| protein of unknown function UPF0001 [Shewanella baltica OS117]
Length = 239
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE EK L +
Sbjct: 20 RRIAQAAQKCARQPSSIRLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKITALKED 79
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL V +
Sbjct: 80 FPDIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIAQRLNDQRPAEL---APLNVCI 133
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 134 QINISAED 141
>gi|323452956|gb|EGB08829.1| hypothetical protein AURANDRAFT_14200, partial [Aureococcus
anophagefferens]
Length = 213
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 10/121 (8%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLE---WHFIGNL 113
PP ++AVSK KP+S+I + AGH FGENYVQE+VEKAA + D +E WHFIG L
Sbjct: 2 PP---TLLAVSKLKPLSLIAAAHAAGHVDFGENYVQELVEKAAAVEDGVEHLKWHFIGRL 58
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM--GRKPLKVLVQVNTSGEEY-GE 170
QSNKV+ L GV L V +V +EK+ +L+ + G PLKV VQVNTSGEE G
Sbjct: 59 QSNKVRQ-LCGVKRLEAVHTVSSEKLVAKLDGAWPELQPGAGPLKVFVQVNTSGEEAKGG 117
Query: 171 C 171
C
Sbjct: 118 C 118
>gi|269960444|ref|ZP_06174817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834871|gb|EEZ88957.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 236
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+ G FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRSPESVQLLAVSKTKPVEAILEAYQGGQLAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V +VD KIA RLN + KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTVDRAKIAQRLNDQRPSE-LKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|424045009|ref|ZP_17782578.1| hypothetical protein VCHENC03_0220 [Vibrio cholerae HENC-03]
gi|408887052|gb|EKM25694.1| hypothetical protein VCHENC03_0220 [Vibrio cholerae HENC-03]
Length = 236
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+ G FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRSPESVQLLAVSKTKPVEAILEAYQGGQLAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V +VD KIA RLN + KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTVDRAKIAQRLNDQRPSE-LKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|283797927|ref|ZP_06347080.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. M62/1]
gi|291074395|gb|EFE11759.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. M62/1]
Length = 234
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 89/136 (65%), Gaps = 10/136 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ A ERS R + + +++VSKTKPV ++++ YEAG R FGEN+VQEI+EK
Sbjct: 6 LEEVRERIRLACERSGRRVEDVTLISVSKTKPVEMLQEAYEAGSRDFGENHVQEILEKHG 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
Q+P+D+ WH IG+LQ NKV+ + + + ++ SVD +A ++ + +K L +
Sbjct: 66 QMPEDVRWHMIGHLQKNKVRQV---IDKVVLIHSVDTVGLAEQIEK---EAAKKDLDIDI 119
Query: 158 LVQVNTSGEE--YGEC 171
L++VN +GEE +G C
Sbjct: 120 LLEVNVAGEESKFGFC 135
>gi|373458946|ref|ZP_09550713.1| protein of unknown function UPF0001 [Caldithrix abyssi DSM 13497]
gi|371720610|gb|EHO42381.1| protein of unknown function UPF0001 [Caldithrix abyssi DSM 13497]
Length = 232
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A+ + +R+ A +R+ R + I +VAVSKT P VI+Q Y+AG R FGEN QE+ +KA
Sbjct: 8 AIARIYERIEAACQRAGRSREEITLVAVSKTMPPEVIKQAYDAGLRVFGENRPQELRDKA 67
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
LP+D++WHFIG+LQ+NK+K + P ++ SVD+ ++A L++ E + VL
Sbjct: 68 RLLPEDIQWHFIGHLQTNKIKYV---APRAVLIHSVDSLRLAEALDQFAEKRSLT-IPVL 123
Query: 159 VQVNTSGE 166
++VN SGE
Sbjct: 124 LEVNVSGE 131
>gi|312378867|gb|EFR25319.1| hypothetical protein AND_09463 [Anopheles darlingi]
Length = 255
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 14/142 (9%)
Query: 39 ALRSVIQRVHQ--AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
+R +Q++ Q AA+ + + +VAVSKTKP+ +I Y G R FGENYVQE+VE
Sbjct: 9 GIRETLQKIDQVYAAKSPTSNAPKPLLVAVSKTKPIELILDAYSVGQRHFGENYVQELVE 68
Query: 97 KA-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM- 150
KA + D+ WHFIG+LQSNK+ +L +PNL M+++V + K+A LN+ E +
Sbjct: 69 KANDERILEQCKDIRWHFIGHLQSNKINKIL-NLPNLHMIQTVHSTKLAEGLNKAWEKLK 127
Query: 151 -----GRKPLKVLVQVNTSGEE 167
+ L VLVQ+NTSGE+
Sbjct: 128 TEHPETQAKLNVLVQINTSGED 149
>gi|119946661|ref|YP_944341.1| alanine racemase domain-containing protein [Psychromonas ingrahamii
37]
gi|119865265|gb|ABM04742.1| alanine racemase domain protein [Psychromonas ingrahamii 37]
Length = 232
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 20/139 (14%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+++V Q + QAA+R+ R D+I+++AVSKTKPV++I++ Y AG R FGENYVQE +EK
Sbjct: 8 IKNVEQTIIQAAQRAGRNADQIQLLAVSKTKPVALIKEAYLAGLRHFGENYVQESIEKIQ 67
Query: 100 QLPDDLE------WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
Q+ D + W+FIG LQSNK +P+ N V+SV+ KIA RLN ++
Sbjct: 68 QIKLDTDFEQAVFWYFIGPLQSNKTRPV---AENFDWVQSVERLKIAQRLN------DQR 118
Query: 154 P-----LKVLVQVNTSGEE 167
P L V +QVN SGE+
Sbjct: 119 PDHLPKLNVCLQVNISGEQ 137
>gi|195037419|ref|XP_001990158.1| GH18384 [Drosophila grimshawi]
gi|193894354|gb|EDV93220.1| GH18384 [Drosophila grimshawi]
Length = 249
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 93/142 (65%), Gaps = 17/142 (11%)
Query: 39 ALRSVIQRVHQAAERSSRPPD----RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
L+ V++R+ +SRP + + +VAVSKTKP + + Y AG R FGENYVQE+
Sbjct: 9 GLQLVLKRIETV--LASRPKEIKAGKPLLVAVSKTKPAESVIEAYNAGQRHFGENYVQEL 66
Query: 95 VEKA------AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN---R 145
VEK+ AQ P D++WH IG+LQ NK+ +L +PNL M+++VD+EK+A +L+
Sbjct: 67 VEKSQHPQILAQCP-DIKWHLIGHLQGNKINKVLK-LPNLHMIQTVDSEKLADKLDAAWS 124
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
+E +PL++LVQVNTS E+
Sbjct: 125 KLEPPPSEPLRILVQVNTSEED 146
>gi|448084609|ref|XP_004195648.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
gi|359377070|emb|CCE85453.1| Piso0_005049 [Millerozyma farinosa CBS 7064]
Length = 300
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 73/114 (64%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
D + +VAVSK KP S I+ +Y+ G R FGENYVQE+V KA LP D++WHFIG LQ+ K
Sbjct: 88 DDVTLVAVSKLKPASDIQALYDHGVRHFGENYVQELVGKAKVLPMDIKWHFIGGLQTGKC 147
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
K L + NL V++VD K +LN ++ ++V +Q+NTSGEE F
Sbjct: 148 KDLSKNISNLYSVKAVDTLKKCQKLNDTRKSANGSVIEVYLQINTSGEEQKSGF 201
>gi|406675563|ref|ZP_11082750.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AMC35]
gi|404626953|gb|EKB23759.1| YggS family pyridoxal phosphate enzyme [Aeromonas veronii AMC35]
Length = 233
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 82/135 (60%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAAER+SR +IR++AVSKTKP I + AG RCFGE+Y QE
Sbjct: 5 AQHLFQVKERIAQAAERASRNLQQIRLLAVSKTKPFEAIMAAHAAGQRCFGESYAQEAAA 64
Query: 97 KAAQL---PD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L P+ D+EWHFIG LQSNK K L+A V+SVD +K+ RLN T
Sbjct: 65 KIDTLRQQPEYSDIEWHFIGPLQSNKSK-LVA--ERFDWVQSVDRDKLIDRLNNQRPTT- 120
Query: 152 RKPLKVLVQVNTSGE 166
PL V +Q+N SGE
Sbjct: 121 MAPLNVCLQINISGE 135
>gi|295115171|emb|CBL36018.1| pyridoxal phosphate enzyme, YggS family [butyrate-producing
bacterium SM4/1]
Length = 200
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 89/135 (65%), Gaps = 8/135 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ A ERS R + + +++VSKTKPV ++++ YEAG R FGEN+VQEI+EK
Sbjct: 6 LEGVRERIRLACERSGRRVEDVTLISVSKTKPVEMLQEAYEAGSRDFGENHVQEILEKHG 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK-PLKVL 158
Q+P+D+ WH IG+LQ NKV+ ++ V ++ SVD +A ++ + E R + +L
Sbjct: 66 QMPEDVRWHMIGHLQKNKVRQVIDKV---VLIHSVDTVGLAEQIEK--EAAKRDLDIDIL 120
Query: 159 VQVNTSGEE--YGEC 171
++VN +GEE +G C
Sbjct: 121 LEVNVAGEESKFGFC 135
>gi|383310794|ref|YP_005363604.1| YggS family pyridoxal phosphate enzyme [Pasteurella multocida
subsp. multocida str. HN06]
gi|380872066|gb|AFF24433.1| YggS family pyridoxal phosphate enzyme [Pasteurella multocida
subsp. multocida str. HN06]
Length = 233
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK
Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPDD---LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
LEWHFIG LQSNK K L+A + ++++D +KIA RLN +KPL
Sbjct: 67 YFAKKNIPLEWHFIGPLQSNKTK-LVA--EHFDWLQTLDRKKIANRLNEQ-RPHYKKPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S E+
Sbjct: 123 VLIQINISDED 133
>gi|156975833|ref|YP_001446740.1| hypothetical protein VIBHAR_03578 [Vibrio harveyi ATCC BAA-1116]
gi|156527427|gb|ABU72513.1| hypothetical protein VIBHAR_03578 [Vibrio harveyi ATCC BAA-1116]
Length = 236
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKCGRSPESVQLLAVSKTKPVEAILEAYQAGQEAFGENYVQEGVGKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK +P+ + V ++D KIA RLN + KPL+
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPSE-LKPLQA 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGEE
Sbjct: 127 LIQVNTSGEE 136
>gi|218132469|ref|ZP_03461273.1| hypothetical protein BACPEC_00328 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992579|gb|EEC58581.1| pyridoxal phosphate enzyme, YggS family [[Bacteroides]
pectinophilus ATCC 43243]
Length = 230
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + +A ERS R P+ + ++AVSKTKPVS I Q+Y AG R FGEN VQE+ +K
Sbjct: 6 LHEVQENIRKACERSGRNPEDVTLIAVSKTKPVSDIEQIYAAGIREFGENKVQEMNDKQK 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK-PLKVL 158
LP D+ WH IG+LQ NKVK + V N+AM+ SVD+ ++A +++ E + + + +L
Sbjct: 66 VLPGDINWHMIGHLQRNKVKYI---VDNVAMIHSVDSVRLAEEISK--EAVKKNVAVDIL 120
Query: 159 VQVNTSGEE 167
V+VN + EE
Sbjct: 121 VEVNVAKEE 129
>gi|365762134|gb|EHN03741.1| YBL036C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 257
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
++ I+ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 41 KVSILVVSKLKPASDIKILYDIGVREFGENYVQEVIEKAKLLPDDIKWHFIGGLQTNKCK 100
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA +PNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 101 D-LAKIPNLFSVETIDSLKKAKKLNESRAKFQPDCDPIFCNVQINTSHED 149
>gi|302343632|ref|YP_003808161.1| alanine racemase [Desulfarculus baarsii DSM 2075]
gi|301640245|gb|ADK85567.1| alanine racemase domain protein [Desulfarculus baarsii DSM 2075]
Length = 227
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V QR+ AA R+ R P +R+VAVSKT+P +RQ AG FGENYVQE+
Sbjct: 4 AANLAWVRQRMDAAARRAGRDPASVRLVAVSKTRPPDDLRQAMAAGQMIFGENYVQELQA 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KAA + WHFIG LQSNK + L+A + + V SVD K+A L R + +G++ L
Sbjct: 64 KAAAMGAGPRWHFIGALQSNKAR-LVAQLAEV--VHSVDRPKLAAALGRQAQELGKE-LG 119
Query: 157 VLVQVNTSGE 166
VLVQV+ +GE
Sbjct: 120 VLVQVSLAGE 129
>gi|401838709|gb|EJT42191.1| YBL036C-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 257
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
++ I+ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 41 KVSILVVSKLKPASDIKILYDIGVREFGENYVQEVIEKAKLLPDDIKWHFIGGLQTNKCK 100
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA +PNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 101 D-LAKIPNLFSVETIDSLKKAKKLNESRAKFQPDCDPIFCNVQINTSHED 149
>gi|365541058|ref|ZP_09366233.1| hypothetical protein VordA3_15522 [Vibrio ordalii ATCC 33509]
Length = 233
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R +R++++AVSKTKPV I + AG R FGENY+QE +KA
Sbjct: 8 IEQITSQIESAQQKCGRARERVQLLAVSKTKPVEAILEAARAGQRLFGENYMQEGADKAQ 67
Query: 100 QL----PD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
P+ DLEWHFIG +QSNK + + N V +VD KIA RLN +G P
Sbjct: 68 YFNTLHPELDLEWHFIGPIQSNKSRIV---AENFTWVHTVDRSKIAQRLNDQ-RPVGMPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|192361248|ref|YP_001980612.1| hypothetical protein CJA_0088 [Cellvibrio japonicus Ueda107]
gi|190687413|gb|ACE85091.1| conserved hypothetical protein TIGR00044 [Cellvibrio japonicus
Ueda107]
Length = 268
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L V +R+HQAA + R P ++++AVSKT+P + I + Y G R FGENY+QE ++K
Sbjct: 48 LAKVTERIHQAAILAGRDPQTVQLIAVSKTQPPAAIAEAYAWGQRRFGENYLQEALDKQQ 107
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
A DDL+WHFIG +QSNK + + A + A V SVD +IA RLN G PL++
Sbjct: 108 ALHALDDLQWHFIGPIQSNKTRLIAA---HFAWVHSVDRLRIAQRLNDQ-RPEGLPPLEI 163
Query: 158 LVQVNTSGEE 167
+QVN E+
Sbjct: 164 CIQVNIDDED 173
>gi|373950376|ref|ZP_09610337.1| protein of unknown function UPF0001 [Shewanella baltica OS183]
gi|386323786|ref|YP_006019903.1| hypothetical protein [Shewanella baltica BA175]
gi|333817931|gb|AEG10597.1| protein of unknown function UPF0001 [Shewanella baltica BA175]
gi|373886976|gb|EHQ15868.1| protein of unknown function UPF0001 [Shewanella baltica OS183]
Length = 239
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE EK L
Sbjct: 20 RRIAQAAQKCARQPSSIRLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKITALKGD 79
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL V +
Sbjct: 80 FPDIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAEF---APLNVCI 133
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 134 QINISAED 141
>gi|221504298|gb|EEE29973.1| proline synthetase associated protein, putative [Toxoplasma gondii
VEG]
Length = 350
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVK 119
+R++AVSK +P S + AG R FGENYVQE+VEKA QL DL+WH IG+LQSNK K
Sbjct: 70 VRLLAVSKYQPASAVAAAALAGQRHFGENYVQELVEKATQLCHLDLKWHMIGHLQSNKAK 129
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM----GRKPLKVLVQVNTSGE 166
LL G P L VE+VD++K+A LN V + PL+VLVQVN S E
Sbjct: 130 QLLMGCPQLYAVETVDSKKLAKTLNDAVAAVLSQRNGAPLRVLVQVNASDE 180
>gi|229845488|ref|ZP_04465617.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
6P18H1]
gi|89892365|gb|ABD78959.1| HI0090-like protein [Haemophilus influenzae]
gi|229811591|gb|EEP47291.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
6P18H1]
Length = 233
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A E + R + ++++AVSKTKP+S I Y+AG R FGENYVQE VEK
Sbjct: 7 LNLIHQKIETACEEAKRNQNTVKLLAVSKTKPISAILSAYQAGQRTFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQDINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|336125239|ref|YP_004567287.1| hypothetical protein VAA_01657 [Vibrio anguillarum 775]
gi|335342962|gb|AEH34245.1| hypothetical protein VAA_01657 [Vibrio anguillarum 775]
Length = 233
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R +R++++AVSKTKPV I + AG R FGENYVQE +K
Sbjct: 8 IEQITSQIESAQQKCGRARERVQLLAVSKTKPVEAILEAARAGQRLFGENYVQEGSDKVQ 67
Query: 100 QL----PD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
P+ DLEWHFIG +QSNK + + N A V +VD KIA RLN G P
Sbjct: 68 YFNTLHPELDLEWHFIGPIQSNKSRIV---AENFAWVHTVDRSKIAQRLNDQ-RPAGMPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|325263919|ref|ZP_08130652.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. D5]
gi|324030957|gb|EGB92239.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. D5]
Length = 232
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V Q++ A +R+ R + + ++AVSKTKP++V+++ Y+AG R FGEN VQE+ +K
Sbjct: 6 LEEVEQKIQAACDRAGRKREEVTLIAVSKTKPIAVLQEAYDAGVRIFGENKVQELTDKYD 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LPDD+ WH IG+LQ+NKVK + V ++ SVD+ K+A + + E ++L+
Sbjct: 66 ALPDDIHWHMIGHLQTNKVKYI---VDKAELIHSVDSLKLAQVIEKEAEKKNCTA-RILI 121
Query: 160 QVNTSGEE 167
+VN +GEE
Sbjct: 122 EVNVAGEE 129
>gi|217972518|ref|YP_002357269.1| alanine racemase domain-containing protein [Shewanella baltica
OS223]
gi|217497653|gb|ACK45846.1| alanine racemase domain protein [Shewanella baltica OS223]
Length = 239
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE EK L
Sbjct: 20 RRIAQAAQKCARQPSSIRLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKITALKGD 79
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL + +
Sbjct: 80 FPDIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNEQRPAEL---APLNICI 133
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 134 QINISAED 141
>gi|444376418|ref|ZP_21175662.1| putative protein YggS [Enterovibrio sp. AK16]
gi|443679396|gb|ELT86052.1| putative protein YggS [Enterovibrio sp. AK16]
Length = 234
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA++ R ++++AVSKTKP+ I EAGH FGENYVQE VEK
Sbjct: 8 LEQVTSQIDSAAQKCGRDASVVQLLAVSKTKPIEAIADAVEAGHTLFGENYVQEGVEKIT 67
Query: 100 QLP---DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKP 154
+LEWHFIG +QSNK +P+ + V S+D KIA RL+ R E P
Sbjct: 68 HFSAIHPNLEWHFIGPIQSNKTRPI---AEHFDWVHSIDRSKIAQRLSDQRPDEL---AP 121
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 122 LQVLIQVNTSGE 133
>gi|115385721|ref|XP_001209407.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187854|gb|EAU29554.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 301
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 82/138 (59%), Gaps = 14/138 (10%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEK 97
L SV R+ AA +S RP IR++AVSK KP S I +++ GH FGENY+QE+ EK
Sbjct: 18 LTSVTSRI-TAAAKSDRP---IRLIAVSKLKPASDILALHQPPGGHLHFGENYLQELQEK 73
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------MVET 149
A LP + WHFIG LQSNK L V L VESVD+EK A L++ + +
Sbjct: 74 AKLLPASIRWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLLDKGWGERSAELRAS 133
Query: 150 MGRKPLKVLVQVNTSGEE 167
L+V VQVNTSGEE
Sbjct: 134 DAEDRLRVFVQVNTSGEE 151
>gi|70982173|ref|XP_746615.1| alanine racemase family protein [Aspergillus fumigatus Af293]
gi|66844238|gb|EAL84577.1| alanine racemase family protein, putative [Aspergillus fumigatus
Af293]
gi|159122150|gb|EDP47272.1| alanine racemase family protein, putative [Aspergillus fumigatus
A1163]
Length = 286
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDR-IRIVAVSKTKPVSVIRQVYE--AG 82
M AS + G L SV R+ AA ++RP + IR++AVSK KP + I ++
Sbjct: 20 MPASPSRTGTLLANLSSVTSRISTAALNANRPATKPIRLIAVSKLKPAADILALHNPPTN 79
Query: 83 HRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGR 142
H FGENY+QE++EK+ LP + WHFIG LQSNK L V L VESVD+EK A
Sbjct: 80 HLHFGENYLQELLEKSKLLPPSIRWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASL 139
Query: 143 LN-----RMVETMG---RKPLKVLVQVNTSGEE 167
L+ R E G L+V VQVNTSGEE
Sbjct: 140 LDRGWGERSEEVRGVALEDRLRVFVQVNTSGEE 172
>gi|226938967|ref|YP_002794038.1| hypothetical protein LHK_00033 [Laribacter hongkongensis HLHK9]
gi|226713891|gb|ACO73029.1| Ala_racemase_N domain containing protein [Laribacter hongkongensis
HLHK9]
Length = 233
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL SV R+ A ++RP +R++AVSKT P +R+ Y G R FGENYVQE+ KA
Sbjct: 8 ALASVTSRIRAAETAAARPSGSVRLLAVSKTFPAEAVREAYACGQRAFGENYVQELAGKA 67
Query: 99 AQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
A L D LEWHFIG LQSNK + + V SV+ KIA RL+ PL+
Sbjct: 68 AALADLPGLEWHFIGPLQSNKTRSV---AETAHWVHSVERLKIAERLSAQRPDH-LPPLQ 123
Query: 157 VLVQVNTSGE 166
V VQVN SGE
Sbjct: 124 VCVQVNVSGE 133
>gi|307546704|ref|YP_003899183.1| hypothetical protein HELO_4114 [Halomonas elongata DSM 2581]
gi|307218728|emb|CBV43998.1| K06997 [Halomonas elongata DSM 2581]
Length = 234
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 88/138 (63%), Gaps = 8/138 (5%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
TD + +L +V +R+ A + RP D R++AVSKTKP ++IR+ + G R FGENYV
Sbjct: 2 TDPALSESLTAVRERLAAALHAAGRPDDDARLLAVSKTKPAAMIREAWRLGQREFGENYV 61
Query: 92 QEIVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVE 148
QE ++K A+L DD+ WHFIG LQSNK + + + A + SVD E++A RL+ +
Sbjct: 62 QEALDKQAELADLDDIVWHFIGPLQSNKSRIV---AEHFAWIHSVDRERLARRLDAQRPA 118
Query: 149 TMGRKPLKVLVQVNTSGE 166
++G PL V +QVN S E
Sbjct: 119 SLG--PLNVCLQVNISDE 134
>gi|71015126|ref|XP_758778.1| hypothetical protein UM02631.1 [Ustilago maydis 521]
gi|46098568|gb|EAK83801.1| hypothetical protein UM02631.1 [Ustilago maydis 521]
Length = 954
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
Query: 62 RIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
R+VA+SK P S I Y +AG FGENYVQE+V+KA LP ++ WHF+G LQSNK K
Sbjct: 218 RLVAISKLHPPSAILAAYRQAGQLHFGENYVQEMVDKAKVLPREIRWHFVGGLQSNKGK- 276
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMG----RKPLKVLVQVNTSGEE 167
LLA +PNL ++E++D+ K A L + + + +PL+V +QVNTSGEE
Sbjct: 277 LLASIPNLYLLETLDSVKAANVLQKALASPDAAKRDEPLRVYLQVNTSGEE 327
>gi|260945681|ref|XP_002617138.1| hypothetical protein CLUG_02582 [Clavispora lusitaniae ATCC 42720]
gi|238848992|gb|EEQ38456.1| hypothetical protein CLUG_02582 [Clavispora lusitaniae ATCC 42720]
Length = 268
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ +V A +S+P +R+VAVSK KP S I +Y G R FGENYVQE+ KA +LP
Sbjct: 41 VLSKVKNA--ETSKP---VRLVAVSKLKPSSDIMALYNHGVRHFGENYVQELTAKAKELP 95
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D++WHFIG+LQ+ K K L + NL VE++D K +L + P+ V +Q+N
Sbjct: 96 KDIQWHFIGSLQTGKCKDLAKDIDNLYAVETIDALKKCKKLENARRAVDFAPINVYLQIN 155
Query: 163 TSGEE 167
TS E+
Sbjct: 156 TSSED 160
>gi|67479513|ref|XP_655138.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56472254|gb|EAL49752.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449706421|gb|EMD46274.1| proline synthetase -associated protein, putative [Entamoeba
histolytica KU27]
Length = 229
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 9/130 (6%)
Query: 42 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA-GHRCFGENYVQEIVEKAAQ 100
SVI +++ A + +P + ++AVSKTKP I+ +Y HR FGENY+QE+ EKA +
Sbjct: 8 SVIGKINHLASQREKP---VCLIAVSKTKPKEAIQHLYNVYNHRVFGENYIQELHEKATE 64
Query: 101 LPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L + D+EWHFIG LQSNK+K LL P+L V++V + +IA +LN+ K + V
Sbjct: 65 LEEVCPDIEWHFIGRLQSNKLK-LLVSTPHLKCVQTVHSIEIAEKLNKAC-INANKTIDV 122
Query: 158 LVQVNTSGEE 167
+VQ+N+SGEE
Sbjct: 123 MVQINSSGEE 132
>gi|449296622|gb|EMC92641.1| hypothetical protein BAUCODRAFT_77008 [Baudoinia compniacensis UAMH
10762]
Length = 274
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 82/138 (59%), Gaps = 10/138 (7%)
Query: 37 ATALRSVIQRVHQ-AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQE 93
A L SV R+ + SSR +R+VAVSK KP + I +++ H FGENY QE
Sbjct: 21 ADNLLSVTNRIEKIDGNASSRY--EVRLVAVSKLKPANDILALHQGPHAHHDFGENYAQE 78
Query: 94 IVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR----MVET 149
+ EKAA LP + WH IG LQ+NK KPL VPNL V SVD K A L + +VE
Sbjct: 79 LTEKAALLPKSVRWHMIGALQTNKCKPLAEQVPNLFCVSSVDTAKKADALEKGRGAIVEK 138
Query: 150 MG-RKPLKVLVQVNTSGE 166
G + L+VLVQVNTSGE
Sbjct: 139 QGLQSQLRVLVQVNTSGE 156
>gi|160876289|ref|YP_001555605.1| alanine racemase domain-containing protein [Shewanella baltica
OS195]
gi|160861811|gb|ABX50345.1| alanine racemase domain protein [Shewanella baltica OS195]
Length = 232
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE EK L
Sbjct: 13 RRIAQAAQKCARQPSSIRLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKIIALKGD 72
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL + +
Sbjct: 73 FPDIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAEL---APLNICI 126
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 127 QINISAED 134
>gi|152994581|ref|YP_001339416.1| alanine racemase domain-containing protein [Marinomonas sp. MWYL1]
gi|150835505|gb|ABR69481.1| alanine racemase domain protein [Marinomonas sp. MWYL1]
Length = 242
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T L V Q+V Q ++ R +R++AVSKTKP+S + Y AG R FGENYVQE V+K
Sbjct: 15 TNLTRVTQQVDQLVQQYQRETGSVRLLAVSKTKPLSALEAAYAAGQRAFGENYVQEAVDK 74
Query: 98 AAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
L D+EWHFIG +QSNK + L+A + V S+D EKIA RL+ PL
Sbjct: 75 FHALAHLVDIEWHFIGPIQSNKSR-LIA--ETMHWVHSIDREKIARRLSEQ-RPKDLPPL 130
Query: 156 KVLVQVNTSGEE 167
V +QVN SGEE
Sbjct: 131 NVCIQVNISGEE 142
>gi|374583011|ref|ZP_09656105.1| pyridoxal phosphate enzyme, YggS family [Desulfosporosinus youngiae
DSM 17734]
gi|374419093|gb|EHQ91528.1| pyridoxal phosphate enzyme, YggS family [Desulfosporosinus youngiae
DSM 17734]
Length = 247
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ QAA RS R P IR++AVSKT+PV I + Y+AG R F EN VQE +EKA
Sbjct: 26 LIEVRQRIAQAAARSKRDPRAIRLLAVSKTQPVRSIEEAYQAGQRTFAENRVQEWLEKAP 85
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP D +WH +G LQ+NKVK L N+AM+ S+D + LN E G LV
Sbjct: 86 DLPKDCQWHLVGRLQTNKVKYL---DQNVAMIHSLDRLSLLETLNEQGERRG-IVWTTLV 141
Query: 160 QVNTS 164
QVN +
Sbjct: 142 QVNIA 146
>gi|378709489|ref|YP_005274383.1| alanine racemase [Shewanella baltica OS678]
gi|418024036|ref|ZP_12663020.1| protein of unknown function UPF0001 [Shewanella baltica OS625]
gi|315268478|gb|ADT95331.1| alanine racemase domain protein [Shewanella baltica OS678]
gi|353536909|gb|EHC06467.1| protein of unknown function UPF0001 [Shewanella baltica OS625]
Length = 239
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE EK L
Sbjct: 20 RRIAQAAQKCARQPSSIRLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKIIALKGD 79
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL + +
Sbjct: 80 FPDIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAEL---APLNICI 133
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 134 QINISAED 141
>gi|241949269|ref|XP_002417357.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640695|emb|CAX45006.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 246
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
++ +VAVSK KP S I +Y G R FGENYVQE++ K+ +LP D++WHFIG LQS K K
Sbjct: 33 KVNLVAVSKLKPSSDIMALYSIGVRHFGENYVQELISKSQELPPDIKWHFIGGLQSGKAK 92
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETM-GRKPLKVLVQVNTSGEEYGECF 172
L V NL VE++D+ K +L+ + G + V +QVNTSGEE F
Sbjct: 93 DLSKHVKNLYAVETIDSLKKCKQLDNTRNKIDGSDDINVFLQVNTSGEEQKSGF 146
>gi|453088062|gb|EMF16103.1| alanine racemase family protein [Mycosphaerella populorum SO2202]
Length = 266
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 85/149 (57%), Gaps = 12/149 (8%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVY--EAGH 83
M AA V L V+ RV A R SRP +R++AVSK KP + I ++ E
Sbjct: 11 MKVDAARAKVLLENLGQVVARVD--AVRGSRP---VRVIAVSKLKPATDILALHQSELKQ 65
Query: 84 RCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL 143
FGENY E+ +KA+ LP + WH IG LQ+NK KPL + VPNL V SVD K A L
Sbjct: 66 NDFGENYSDELTKKASLLPRSIRWHMIGGLQTNKCKPLASEVPNLWCVSSVDTAKKANEL 125
Query: 144 NRMVETMGRK-----PLKVLVQVNTSGEE 167
+ +++ K L+VLVQVNTSGEE
Sbjct: 126 EKGRKSLAEKESLTDKLRVLVQVNTSGEE 154
>gi|323356254|gb|EGA88058.1| YBL036C-like protein [Saccharomyces cerevisiae VL3]
Length = 247
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 100
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 101 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSRED 149
>gi|163803737|ref|ZP_02197595.1| FkuA [Vibrio sp. AND4]
gi|159172456|gb|EDP57324.1| FkuA [Vibrio sp. AND4]
Length = 236
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 13/132 (9%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P ++++AVSKTKP I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRHDEQKYGRSPKSVKLLAVSKTKPDEAIVEAYQAGQEAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPL 155
PD+ +EWHFIG +QSNK +P+ + V ++D KIA RLN R E KPL
Sbjct: 71 KHYPDNRIEWHFIGPIQSNKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPNEL---KPL 124
Query: 156 KVLVQVNTSGEE 167
+VL+QVNTSGEE
Sbjct: 125 QVLIQVNTSGEE 136
>gi|6319435|ref|NP_009517.1| hypothetical protein YBL036C [Saccharomyces cerevisiae S288c]
gi|586419|sp|P38197.1|YBD6_YEAST RecName: Full=UPF0001 protein YBL036C
gi|157830174|pdb|1B54|A Chain A, Crystal Structure Of A Yeast Hypothetical Protein-A
Structure From Bnl's Human Proteome Project
gi|463272|emb|CAA55058.1| YBL0413 [Saccharomyces cerevisiae]
gi|536047|emb|CAA84856.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810298|tpg|DAA07083.1| TPA: hypothetical protein YBL036C [Saccharomyces cerevisiae S288c]
gi|349576344|dbj|GAA21515.1| K7_Ybl036cp [Saccharomyces cerevisiae Kyokai no. 7]
gi|392301180|gb|EIW12269.1| hypothetical protein CENPK1137D_4887 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 257
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 100
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 101 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHED 149
>gi|323310167|gb|EGA63359.1| YBL036C-like protein [Saccharomyces cerevisiae FostersO]
Length = 231
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 15 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 74
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 75 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSXED 123
>gi|6137630|pdb|1CT5|A Chain A, Crystal Structure Of Yeast Hypothetical Protein
Ybl036c-Selenomet Crystal
Length = 256
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 40 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 99
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 100 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHED 148
>gi|354546491|emb|CCE43221.1| hypothetical protein CPAR2_208660 [Candida parapsilosis]
Length = 265
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 72/115 (62%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
++VAVSK KP S I +Y G R FGENYVQE+V K+ +LP D+ WHFIG LQS K K L
Sbjct: 55 KLVAVSKFKPSSDIMALYSIGVRHFGENYVQELVAKSEELPKDICWHFIGGLQSGKCKDL 114
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECFIKCS 176
V NL VE+VD+ K +LN E + V +QVNTSGEE F++ S
Sbjct: 115 SNKVSNLWAVETVDSLKKCRQLNNARERKEGDVINVYLQVNTSGEEQKSGFLQMS 169
>gi|410081497|ref|XP_003958328.1| hypothetical protein KAFR_0G01590 [Kazachstania africana CBS 2517]
gi|372464916|emb|CCF59193.1| hypothetical protein KAFR_0G01590 [Kazachstania africana CBS 2517]
Length = 249
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 12/122 (9%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
AE S++ + ++AVSK KP S I+ +Y+ G R FGENYVQE++EKA+ LP+D++WHFI
Sbjct: 27 AEHSTK---EVLLLAVSKLKPASDIKILYDHGVRQFGENYVQELIEKASLLPNDIKWHFI 83
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-----KPLKVLVQVNTSG 165
G LQ+NK K LA V NL +E++D+ K A +LN E G+ P+ VQ+NTS
Sbjct: 84 GGLQTNKCKD-LAKVANLYCIETIDSLKKAKKLN---EARGKYQPNADPIMCNVQINTSH 139
Query: 166 EE 167
EE
Sbjct: 140 EE 141
>gi|151946358|gb|EDN64580.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408862|gb|EDV12127.1| hypothetical protein SCRG_02999 [Saccharomyces cerevisiae RM11-1a]
gi|207347852|gb|EDZ73897.1| YBL036Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272725|gb|EEU07698.1| YBL036C-like protein [Saccharomyces cerevisiae JAY291]
gi|259144811|emb|CAY77750.1| EC1118_1B15_0870p [Saccharomyces cerevisiae EC1118]
gi|323338793|gb|EGA80008.1| YBL036C-like protein [Saccharomyces cerevisiae Vin13]
gi|323349874|gb|EGA84087.1| YBL036C-like protein [Saccharomyces cerevisiae Lalvin QA23]
gi|365767037|gb|EHN08525.1| YBL036C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 257
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 100
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 101 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSRED 149
>gi|339256268|ref|XP_003370492.1| pyridoxal phosphate enzyme, YggS family [Trichinella spiralis]
gi|316964562|gb|EFV49608.1| pyridoxal phosphate enzyme, YggS family [Trichinella spiralis]
Length = 256
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA--AQL---PDDLEWHFIGNLQSN 116
R+VAVSK KPV I Y AG R FGENYVQE++EKA QL D+ WHFIG+LQ N
Sbjct: 34 RLVAVSKRKPVVDICAAYAAGQRHFGENYVQELIEKANDEQLLVACPDIRWHFIGHLQLN 93
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRM----VETMGRKPLKVLVQVNTSGE 166
KV+ L+ VPNL +VE+VD+ K+A LNR+ V+ + V++QVNTSGE
Sbjct: 94 KVRKLIENVPNLHVVETVDSVKLAETLNRVARGRVDQTLLGKINVMLQVNTSGE 147
>gi|410664795|ref|YP_006917166.1| hypothetical protein M5M_11295 [Simiduia agarivorans SA1 = DSM
21679]
gi|409027152|gb|AFU99436.1| hypothetical protein M5M_11295 [Simiduia agarivorans SA1 = DSM
21679]
Length = 182
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 7/132 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V R+ QA++++ R D +R++AVSKT+P IR Y G R FGENY+QE ++
Sbjct: 5 ADKLMQVTARLQQASQQAGRGRDAVRLLAVSKTRPADDIRAAYACGQRDFGENYLQEALD 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRMVETMGRKP 154
K AQL D L WHFIG +QSNK +P+ V SVD KIA RL ++ E + P
Sbjct: 65 KQAQLADLALSWHFIGPIQSNKTRPIAQA---FDWVHSVDRLKIAQRLSDQRPEDL--PP 119
Query: 155 LKVLVQVNTSGE 166
L + +QVN GE
Sbjct: 120 LNICLQVNIDGE 131
>gi|51013199|gb|AAT92893.1| YBL036C [Saccharomyces cerevisiae]
Length = 257
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 100
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 101 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHED 149
>gi|440897046|gb|ELR48819.1| Proline synthase co-transcribed bacterial-like protein, partial
[Bos grunniens mutus]
Length = 241
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 80/117 (68%), Gaps = 9/117 (7%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFI 110
P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ P +++WHFI
Sbjct: 4 PAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASN-PQILSSCPEIKWHFI 62
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LKVLVQVNTSGE 166
G+LQ V L+A VPNL+M+E+VD+ K+A ++N + G LKV+VQ+NTSGE
Sbjct: 63 GHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGE 118
>gi|323306047|gb|EGA59781.1| YBL036C-like protein [Saccharomyces cerevisiae FostersB]
Length = 231
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 15 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 74
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 75 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHED 123
>gi|399217021|emb|CCF73708.1| unnamed protein product [Babesia microti strain RI]
Length = 223
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+VAV+K +PV I +Y G FGE+ VQ++VEKA++LP D+ WHFIG +QSNK K
Sbjct: 25 RLVAVTKYQPVERILALYSLGQIHFGESKVQDLVEKASRLPKDIRWHFIGKIQSNKCKQ- 83
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
LA V NL VES+D+E IA LN+ + K + V +Q+NTSGEE
Sbjct: 84 LAKVDNLFQVESLDSEYIASELNKCLT----KKINVYIQINTSGEE 125
>gi|333909421|ref|YP_004483007.1| hypothetical protein Mar181_3061 [Marinomonas posidonica
IVIA-Po-181]
gi|333479427|gb|AEF56088.1| protein of unknown function UPF0001 [Marinomonas posidonica
IVIA-Po-181]
Length = 240
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 8/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V+Q+V Q A + R +R++AVSKTKP+ I+ Y++G R FGENYVQE +K
Sbjct: 17 LSQVMQQVEQLALDAGRDQTSVRVLAVSKTKPLDDIKAAYQSGQRAFGENYVQEAFDKHH 76
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLK 156
L + D+EWHFIG +QSNK + + + V S+D EKIA RL+ + E M R L+
Sbjct: 77 ALSELTDIEWHFIGPIQSNKSRQI---AETMHWVHSIDREKIARRLSEQRPEAMPR--LQ 131
Query: 157 VLVQVNTSGEE 167
V +QVN SGEE
Sbjct: 132 VCIQVNISGEE 142
>gi|156064729|ref|XP_001598286.1| hypothetical protein SS1G_00372 [Sclerotinia sclerotiorum 1980]
gi|154691234|gb|EDN90972.1| hypothetical protein SS1G_00372 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 265
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 88/143 (61%), Gaps = 24/143 (16%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVE 96
+A +SV +RV AA +R +R+VAVSK KP + I ++E A FGENY QE++E
Sbjct: 15 SAFQSVSERVSNAA--GTR---NVRLVAVSKLKPATDILALHEQANVEHFGENYAQELME 69
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR---- 152
KA LP +++WHFIG LQSNK KPL + + NL +V SVD++K A +L ++GR
Sbjct: 70 KAEILPRNIKWHFIGGLQSNKCKPLASTISNLYLVSSVDSQKKASQL-----SIGRSLLP 124
Query: 153 ---------KPLKVLVQVNTSGE 166
PL + +QVNTSGE
Sbjct: 125 VPADSSSHPSPLNIHIQVNTSGE 147
>gi|238878824|gb|EEQ42462.1| hypothetical protein CAWG_00673 [Candida albicans WO-1]
Length = 277
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
++ +VAVSK KP S I +Y G R FGENYVQE++ K+ +LP+D++WHFIG LQS K K
Sbjct: 62 KVNLVAVSKLKPSSDIMALYSIGVRHFGENYVQELIAKSQELPNDIKWHFIGGLQSGKAK 121
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
L V NL VE++D+ K +L+ + + V +Q+NTSGEE F
Sbjct: 122 DLSKHVANLYAVETIDSLKKCKQLDNTRVKVEGDDINVFLQINTSGEEQKSGF 174
>gi|149247854|ref|XP_001528315.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448269|gb|EDK42657.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 278
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 78/132 (59%), Gaps = 7/132 (5%)
Query: 42 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL 101
+V+++VH ++ R+VAVSK KP S I +Y AG R FGENYVQE+V K+ +L
Sbjct: 50 AVLKQVHDLNPKT-------RLVAVSKLKPSSDIMALYAAGVRHFGENYVQELVAKSQEL 102
Query: 102 PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
P D+ WHFIG +Q K K L V NL VE++D K +LN + + V +QV
Sbjct: 103 PKDICWHFIGGMQLGKAKDLSNKVSNLYAVETIDTFKKCKQLNSTRVKNDGEIINVYLQV 162
Query: 162 NTSGEEYGECFI 173
NTSGEE FI
Sbjct: 163 NTSGEEQKSGFI 174
>gi|323498672|ref|ZP_08103663.1| TIM-barrel fold family protein [Vibrio sinaloensis DSM 21326]
gi|323316272|gb|EGA69292.1| TIM-barrel fold family protein [Vibrio sinaloensis DSM 21326]
Length = 238
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ RP D ++++AVSKTKP I + +AG FGENYVQE EK A
Sbjct: 8 IEQITSQIASAQQKCGRPRDSVQLLAVSKTKPNGAILEAAQAGQLAFGENYVQEGAEKVA 67
Query: 100 QL----PD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
P+ +LEWHFIG +QSNK + + N A V +VD KIA RLN G P
Sbjct: 68 YFTQHHPELELEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAQRLNDQ-RPAGSPP 123
Query: 155 LKVLVQVNTSGE 166
++VL+QVNTSGE
Sbjct: 124 IQVLMQVNTSGE 135
>gi|90412040|ref|ZP_01220047.1| Predicted enzyme with a TIM-barrel fold [Photobacterium profundum
3TCK]
gi|90327018|gb|EAS43397.1| Predicted enzyme with a TIM-barrel fold [Photobacterium profundum
3TCK]
Length = 233
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ VI ++ A E+ R D ++++AVSKTKP++ I AG R FGENYVQE VEK
Sbjct: 8 IEQVISQITSATEKCGRTTDSVQLLAVSKTKPIAEIDDAIAAGQRAFGENYVQEGVEKVQ 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ ++ WHFIG +QSNK +P+ + V SVD K A RLN + P
Sbjct: 68 HFANHAQTEEIFWHFIGPIQSNKTRPI---AEHFDWVHSVDRIKTARRLNEQRPS-SMAP 123
Query: 155 LKVLVQVNTSGEE 167
L +L+QVNTSGEE
Sbjct: 124 LNILLQVNTSGEE 136
>gi|68488827|ref|XP_711760.1| hypothetical protein CaO19.10312 [Candida albicans SC5314]
gi|68488872|ref|XP_711736.1| hypothetical protein CaO19.2794 [Candida albicans SC5314]
gi|46433058|gb|EAK92514.1| hypothetical protein CaO19.2794 [Candida albicans SC5314]
gi|46433083|gb|EAK92538.1| hypothetical protein CaO19.10312 [Candida albicans SC5314]
Length = 277
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
++ +VAVSK KP S I +Y G R FGENYVQE++ K+ +LP+D++WHFIG LQS K K
Sbjct: 62 KVNLVAVSKLKPSSDIMALYSIGVRHFGENYVQELIAKSQELPNDIKWHFIGGLQSGKAK 121
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
L V NL VE++D+ K +L+ + + V +Q+NTSGEE F
Sbjct: 122 DLSKHVANLYAVETIDSLKKCKQLDNTRVKVEGDDINVFLQINTSGEEQKSGF 174
>gi|159114248|ref|XP_001707349.1| Hypothetical protein, enzyme with a TIM-barrel fold [Giardia
lamblia ATCC 50803]
gi|157435453|gb|EDO79675.1| hypothetical protein, enzyme with a TIM-barrel fold [Giardia
lamblia ATCC 50803]
Length = 230
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 81/109 (74%), Gaps = 8/109 (7%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ---LPDDLEWHFIGNLQSNKV 118
+++AVSKTKPV I + Y AG R FGENYVQE+V+KA + D+EWHFIG+LQ+NK
Sbjct: 19 KLIAVSKTKPVEAILEAYAAGQRLFGENYVQELVKKAEAVQGVASDIEWHFIGHLQTNKA 78
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRM-VETMGRKPLKVLVQVNTSGE 166
+ +A +PN +V++VD++++A RL+ + + +G PL+V++Q+N SGE
Sbjct: 79 RD-VAFIPN-CVVQTVDSDRLARRLSELRPDELG--PLRVMIQINISGE 123
>gi|407070396|ref|ZP_11101234.1| hypothetical protein VcycZ_12663 [Vibrio cyclitrophicus ZF14]
Length = 234
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R PD ++++AVSKTKP+ I + G FGENYVQE V+K
Sbjct: 8 IEQITSQIRSAEKKCGRDPDSVQLLAVSKTKPIDAILEAALGGQVAFGENYVQEGVDKVK 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +LEWHFIG +QSNK +P+ + V SVD +KIA RLN + P
Sbjct: 68 HFSEHHSNLNLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLNDQRPSE-LPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|323334742|gb|EGA76115.1| YBL036C-like protein [Saccharomyces cerevisiae AWRI796]
Length = 231
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K
Sbjct: 15 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCK 74
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEE 167
LA VPNL VE++D+ K A +LN R P+ VQ+NTS E+
Sbjct: 75 D-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSRED 123
>gi|119486907|ref|XP_001262373.1| alanine racemase family protein, putative [Neosartorya fischeri
NRRL 181]
gi|119410530|gb|EAW20476.1| alanine racemase family protein, putative [Neosartorya fischeri
NRRL 181]
Length = 267
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDR-IRIVAVSKTKPVSVIRQVYE--AG 82
M AS + L SV RV AA ++RP + IR++AVSK KP + I ++
Sbjct: 1 MPASPSRTATLLANLSSVTSRVSTAALNANRPATKPIRLIAVSKLKPAADILALHNPPTN 60
Query: 83 HRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGR 142
H FGENY+QE++EK+ LP + WHFIG LQSNK L V L VES+D+EK A
Sbjct: 61 HLHFGENYLQELLEKSKLLPPSIRWHFIGGLQSNKCVTLARDVRGLWAVESIDSEKKASL 120
Query: 143 LN-----RMVETMG---RKPLKVLVQVNTSGEE 167
L+ R E G L+VLVQVNTSGEE
Sbjct: 121 LDRGWGERSEEVRGVAHEDRLRVLVQVNTSGEE 153
>gi|448511809|ref|XP_003866619.1| racemase [Candida orthopsilosis Co 90-125]
gi|380350957|emb|CCG21180.1| racemase [Candida orthopsilosis Co 90-125]
Length = 291
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 71/114 (62%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+ R+VAVSK KP S I +Y G R FGENYVQE+V K+ +LP D+ WHFIG LQS K K
Sbjct: 79 KTRLVAVSKFKPSSDIMALYSIGVRHFGENYVQELVAKSEELPKDICWHFIGGLQSGKCK 138
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECFI 173
L V NL VE+VD K +LN E + + V +QVNTSGEE F+
Sbjct: 139 DLSNRVTNLWAVETVDTLKKCRQLNNARERKEGEIINVYLQVNTSGEEQKSGFL 192
>gi|413963615|ref|ZP_11402842.1| alanine racemase [Burkholderia sp. SJ98]
gi|413929447|gb|EKS68735.1| alanine racemase [Burkholderia sp. SJ98]
Length = 231
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 15/134 (11%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ +AA +SR D ++++AVSKT P +R +EAG R FGENYVQE + K A
Sbjct: 7 LEEVRQRIAKAAHEASRDADSVKLLAVSKTFPADDVRAAFEAGQRAFGENYVQEGIAKIA 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-- 154
+L D ++EWHFIG LQSNK K + V S+D KIA RL+ R P
Sbjct: 67 ELADLRGEIEWHFIGPLQSNKTKVV---AEQFDWVHSIDRLKIAERLSAQ-----RPPSA 118
Query: 155 --LKVLVQVNTSGE 166
L V VQVN SGE
Sbjct: 119 PALNVCVQVNVSGE 132
>gi|28899390|ref|NP_798995.1| FkuA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839183|ref|ZP_01991850.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260366261|ref|ZP_05778720.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
K5030]
gi|260878922|ref|ZP_05891277.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AN-5034]
gi|260898277|ref|ZP_05906773.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
Peru-466]
gi|260903381|ref|ZP_05911776.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AQ4037]
gi|417318890|ref|ZP_12105448.1| FkuA protein [Vibrio parahaemolyticus 10329]
gi|28807626|dbj|BAC60879.1| FkuA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747285|gb|EDM58269.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308085861|gb|EFO35556.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
Peru-466]
gi|308090493|gb|EFO40188.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AN-5034]
gi|308107474|gb|EFO45014.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
AQ4037]
gi|308113535|gb|EFO51075.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
K5030]
gi|328474080|gb|EGF44885.1| FkuA protein [Vibrio parahaemolyticus 10329]
Length = 237
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ + ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRRDEQKCGRSPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK + L+A + V ++D KIA RLN KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSR-LVA--EHFDWVHTIDRAKIAQRLNEQ-RPQELKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGE+
Sbjct: 127 LIQVNTSGED 136
>gi|433658688|ref|YP_007276067.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like protein PROSC [Vibrio parahaemolyticus
BB22OP]
gi|432509376|gb|AGB10893.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial-like protein PROSC [Vibrio parahaemolyticus
BB22OP]
Length = 237
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ + ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A
Sbjct: 11 ITSQIRRDEQKCGRSPESVQLLAVSKTKPVEAILEAYQAGQNAFGENYVQEGVSKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK + L+A + V ++D KIA RLN KPL+V
Sbjct: 71 EHYPDNRIEWHFIGPIQSNKSR-LVA--EHFDWVHTIDRAKIAQRLNEQ-RPQELKPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGE+
Sbjct: 127 LIQVNTSGED 136
>gi|430814036|emb|CCJ28677.1| unnamed protein product [Pneumocystis jirovecii]
Length = 243
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 11/133 (8%)
Query: 44 IQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD 103
++ V R S+ + +R+VAVSK V I+ Y+ G R FGEN+VQE+VEKA LP
Sbjct: 11 LKSVRDTILRYSKNTE-VRLVAVSKLNSVEDIKIAYDYGQRHFGENFVQEMVEKAKLLPS 69
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR---------KP 154
D +WHFIG LQ+NK K L++ + NL VES+D+ K A LN+ + + R +
Sbjct: 70 DCQWHFIGGLQTNKCKTLVS-ISNLWAVESLDSYKKAFALNKALMNLKRSTNMLDNNDRK 128
Query: 155 LKVLVQVNTSGEE 167
L V VQVNTS EE
Sbjct: 129 LNVYVQVNTSCEE 141
>gi|114046770|ref|YP_737320.1| hypothetical protein Shewmr7_1264 [Shewanella sp. MR-7]
gi|113888212|gb|ABI42263.1| Protein of unknown function UPF0001 [Shewanella sp. MR-7]
Length = 238
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 7/125 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE V K L
Sbjct: 14 RIAQAAQKCARLPHSIRLLAVSKTKPIEDIIAAYDAGQRCFGENYVQEGVTKIETLKSTH 73
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK L+A + + ++ EKIA RLN PL V +Q+N
Sbjct: 74 PDIEWHFIGPLQSNKTA-LVAQ--HFDWMHTLSREKIAQRLNEQ-RPAQLAPLNVCIQIN 129
Query: 163 TSGEE 167
S E+
Sbjct: 130 ISDED 134
>gi|261210038|ref|ZP_05924336.1| hypothetical protein VCJ_000280 [Vibrio sp. RC341]
gi|260840803|gb|EEX67345.1| hypothetical protein VCJ_000280 [Vibrio sp. RC341]
Length = 236
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 82/129 (63%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ A ++ R ++++AVSKTKPV I + +AG RCFGENYVQE V+K A
Sbjct: 11 ITAQIESAQQKCGRARSTVQLLAVSKTKPVEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
Q P LEWHFIG LQSNK + L+A + V +++ EKIA RLN +PL+V
Sbjct: 71 EQYPQLALEWHFIGPLQSNKTR-LMA--EHFDWVHTIEREKIAVRLNEQ-RPADMQPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|308050653|ref|YP_003914219.1| alanine racemase [Ferrimonas balearica DSM 9799]
gi|307632843|gb|ADN77145.1| alanine racemase domain protein [Ferrimonas balearica DSM 9799]
Length = 227
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ AA ++ R + I ++AVSKTKP +IR+ Y AG R FGENY+QE V+K L D D
Sbjct: 14 RIDSAAAQAGRVGESITLLAVSKTKPAEMIREAYLAGARDFGENYLQEGVDKIDALQDLD 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
+ WHFIG LQSNK +P+ + SVD KIA RL+ + G+ PL V +QVN S
Sbjct: 74 IRWHFIGPLQSNKTRPV---AERFDWIHSVDRLKIAQRLSEQRPS-GKAPLNVCIQVNIS 129
Query: 165 GEE 167
E+
Sbjct: 130 AEQ 132
>gi|388256335|ref|ZP_10133516.1| hypothetical protein O59_000606 [Cellvibrio sp. BR]
gi|387940035|gb|EIK46585.1| hypothetical protein O59_000606 [Cellvibrio sp. BR]
Length = 233
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 8/130 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V R+HQAA + R P ++++AVSKT+P + + Y G R FGENY+QE ++K
Sbjct: 8 LAKVTARIHQAATAAGRNPQTVQLIAVSKTQPAQALSEAYAWGQRAFGENYLQEALDKQV 67
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLK 156
QL D+EWHFIG +QSNK +P+ + V SVD KIA RL+ + E++ PL
Sbjct: 68 QLAGLTDIEWHFIGPIQSNKTRPI---AEHFDWVHSVDRLKIAQRLHEQRPESL--PPLN 122
Query: 157 VLVQVNTSGE 166
+ VQVN E
Sbjct: 123 ICVQVNIDDE 132
>gi|410624652|ref|ZP_11335447.1| hypothetical protein GPAL_3982 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410155733|dbj|GAC30821.1| hypothetical protein GPAL_3982 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 229
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 81/133 (60%), Gaps = 6/133 (4%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L SV ++ Q A ++ R + I ++AVSKTKPVS I YEAGHR FGENYVQE V+
Sbjct: 6 AENLLSVSAQIKQCALKAGRDANNIELLAVSKTKPVSDIVLAYEAGHRSFGENYVQEGVD 65
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
K A+L D+ WHFIG LQSNK + L+A N + SVD KIA RL+ P
Sbjct: 66 KIAELKHLTDISWHFIGPLQSNKSR-LVA--ENFDWMHSVDRYKIAKRLHEQRPNYA-SP 121
Query: 155 LKVLVQVNTSGEE 167
L + +Q+N E+
Sbjct: 122 LNICIQINIDDED 134
>gi|407044612|gb|EKE42712.1| pyridoxal phosphate enzyme, YggS family protein [Entamoeba nuttalli
P19]
Length = 229
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 9/130 (6%)
Query: 42 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA-GHRCFGENYVQEIVEKAAQ 100
SVI +++ A + +P + ++AVSKTKP I+ +Y HR FGENYVQE+ EKA +
Sbjct: 8 SVIGKINHLASQREKP---VCLIAVSKTKPKEAIQHLYNIYNHRVFGENYVQELHEKATE 64
Query: 101 LPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L + D+EWHFIG LQSNK+K LL P+L V++V + +I +LN+ K + V
Sbjct: 65 LEEVCPDIEWHFIGRLQSNKLK-LLVSTPHLKCVQTVHSIEIVEKLNKAC-INANKTIDV 122
Query: 158 LVQVNTSGEE 167
+VQ+N+SGEE
Sbjct: 123 MVQINSSGEE 132
>gi|406603656|emb|CCH44809.1| Proline synthetase [Wickerhamomyces ciferrii]
Length = 277
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 42 SVIQRVHQAAERSSRPPD---RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
S+ +V ++ + SRP + +VAVSK KP S I+ +Y+ G R FGENY QE++ KA
Sbjct: 42 SIYSKVQESVK--SRPDSINHPVELVAVSKYKPASDIKALYDHGVRHFGENYTQELISKA 99
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+ LP D++WHFIG LQSNK K L + NL VE++D+ K A +LN + + +
Sbjct: 100 SILPKDIKWHFIGGLQSNKCKDLSNNIENLHSVETIDSLKKAKKLNDSRSGVNGSIINIY 159
Query: 159 VQVNTSGE 166
+Q+N S E
Sbjct: 160 LQINASNE 167
>gi|255729862|ref|XP_002549856.1| hypothetical protein CTRG_04153 [Candida tropicalis MYA-3404]
gi|240132925|gb|EER32482.1| hypothetical protein CTRG_04153 [Candida tropicalis MYA-3404]
Length = 276
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
++++AVSK KP S I +Y G R FGENYVQE++ K+ +LP D+ WHFIG LQS K K
Sbjct: 59 VQLIAVSKLKPSSDIMALYSIGVRHFGENYVQELISKSQELPQDINWHFIGGLQSGKCKD 118
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECFIK 174
L V NL VE++D+ K +LN + + + V +Q+NTS EE F+K
Sbjct: 119 LSKHVKNLYSVETIDSFKKCKQLNNSRDKIDGDVINVYLQINTSEEEQKSGFLK 172
>gi|358058752|dbj|GAA95715.1| hypothetical protein E5Q_02372 [Mixia osmundae IAM 14324]
Length = 314
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 86/132 (65%), Gaps = 9/132 (6%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEK 97
A++ I + +A+R+ P R+V VSK KP S I ++E H FGENYVQE+V+K
Sbjct: 63 AVKREIAQACSSAQRTQEP----RLVVVSKLKPPSDILALHEKTSHLHFGENYVQELVDK 118
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV--ETMGRKPL 155
A+ LP + W FIG+LQSNK K +LA +PNLA VE++D+ K A R + E+ RK L
Sbjct: 119 ASILPASIRWRFIGSLQSNKCK-VLAAIPNLAAVETLDSVKKADLFERALSGESDDRK-L 176
Query: 156 KVLVQVNTSGEE 167
V +QVNTSGEE
Sbjct: 177 AVYLQVNTSGEE 188
>gi|52425760|ref|YP_088897.1| hypothetical protein MS1705 [Mannheimia succiniciproducens MBEL55E]
gi|52307812|gb|AAU38312.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 230
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 84/135 (62%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L+ + + + + + P + ++++AVSKTKPV + Q Y+AG R FGENYVQE VE
Sbjct: 4 ANNLKQIHKNIVSICQNAGLPSNSVKLLAVSKTKPVEDLEQAYQAGQRAFGENYVQEGVE 63
Query: 97 KA----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
K A+ P D+EWHFIG LQSNK + L+A +++VD EKIA RLN +
Sbjct: 64 KIEFFQAKHP-DMEWHFIGPLQSNKTR-LVAEY--FDWMQTVDREKIAIRLNEQ-RPANK 118
Query: 153 KPLKVLVQVNTSGEE 167
PL VL+Q+N S EE
Sbjct: 119 SPLNVLIQINISDEE 133
>gi|336426846|ref|ZP_08606854.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010486|gb|EGN40469.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 231
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + +A RS R + ++AVSKTKP+ ++ +VY G R FGEN VQE+V+KA
Sbjct: 6 LYQVQENMKEACRRSGRAESDVTLIAVSKTKPLPMLEEVYSLGIRDFGENKVQELVDKAE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL-KVL 158
QLPDD+ WH IG+LQ NKVK + V + M+ SVD+ ++A +++ E + R + +L
Sbjct: 66 QLPDDIRWHMIGHLQRNKVKYI---VDKVYMIHSVDSLRLAEEISK--EAVKRGIIVNIL 120
Query: 159 VQVNTSGEE 167
++VN +GEE
Sbjct: 121 IEVNVAGEE 129
>gi|113969537|ref|YP_733330.1| hypothetical protein Shewmr4_1193 [Shewanella sp. MR-4]
gi|113884221|gb|ABI38273.1| Protein of unknown function UPF0001 [Shewanella sp. MR-4]
Length = 238
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 7/125 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA++ +R P IR++AVSKTKP+ I Y+AG RCFGENYVQE V K L
Sbjct: 14 RIAQAAQKCARLPHSIRLLAVSKTKPIEDIIAAYDAGQRCFGENYVQEGVTKIESLKGTH 73
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK L+A + + ++ EKIA RLN PL V +Q+N
Sbjct: 74 PDIEWHFIGPLQSNKTA-LVA--QHFDWMHTLSREKIAQRLNEQ-RPAHLAPLNVCIQIN 129
Query: 163 TSGEE 167
S E+
Sbjct: 130 ISDED 134
>gi|395649027|ref|ZP_10436877.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 228
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R + I ++AVSKTKP +R+ Y AG R FGENY+QE + K A+L
Sbjct: 11 VSQRIRAAADAVQRDANSIHLLAVSKTKPAQALREAYAAGLRDFGENYLQEALGKQAELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|410092445|ref|ZP_11288971.1| hypothetical protein AAI_17146 [Pseudomonas viridiflava UASWS0038]
gi|409760216|gb|EKN45376.1| hypothetical protein AAI_17146 [Pseudomonas viridiflava UASWS0038]
Length = 228
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ A+ + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRTASLAAQRDPASVGLLAVSKTKPSSALREAYAAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ G +PL
Sbjct: 65 KQGELADLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEGLEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|423198244|ref|ZP_17184827.1| YggS family pyridoxal phosphate enzyme [Aeromonas hydrophila SSU]
gi|404630468|gb|EKB27145.1| YggS family pyridoxal phosphate enzyme [Aeromonas hydrophila SSU]
Length = 233
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ QAA R+ R D I+++AVSKTKP+ + + Y AG R FGE+Y QE K
Sbjct: 8 LLQVKERIVQAASRAGRSGDHIQLLAVSKTKPLEAVCEAYAAGQRRFGESYAQEAATKID 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
L + D+EWHFIG LQSNK K + V+SVD EK+ RLN T G P
Sbjct: 68 TLREQGTCTDIEWHFIGPLQSNKSKLV---AERFDWVQSVDREKLIERLNNQRPT-GLAP 123
Query: 155 LKVLVQVNTSGE 166
L + +Q+N SGE
Sbjct: 124 LNICLQINISGE 135
>gi|213971473|ref|ZP_03399585.1| conserved hypothetical protein TIGR00044 [Pseudomonas syringae pv.
tomato T1]
gi|301383500|ref|ZP_07231918.1| hypothetical protein PsyrptM_12746 [Pseudomonas syringae pv. tomato
Max13]
gi|302062924|ref|ZP_07254465.1| hypothetical protein PsyrptK_23299 [Pseudomonas syringae pv. tomato
K40]
gi|302134692|ref|ZP_07260682.1| hypothetical protein PsyrptN_25079 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213923755|gb|EEB57338.1| conserved hypothetical protein TIGR00044 [Pseudomonas syringae pv.
tomato T1]
Length = 228
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAKRDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + A N A V SVD KIA RL+ G +PL
Sbjct: 65 KQLELADLPLCWHFIGPIQSNKTR---AIAENFAWVHSVDRLKIAQRLSEQ-RPEGLEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|440637935|gb|ELR07854.1| YggS family pyridoxal phosphate enzyme [Geomyces destructans
20631-21]
Length = 258
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 7/140 (5%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDR-IRIVAVSKTKPVSVIRQVY-EAGHRCFGENY 90
D A L S +Q H + SSR R +R+VAVSK KP + I ++ E FGENY
Sbjct: 11 DPARAKTLVSNLQ--HVSGLISSRAQGRNVRLVAVSKLKPAADILALHQEINQEHFGENY 68
Query: 91 VQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
QE+ EKA LP ++WHFIG LQSNK KPL + +PNL +V S+D+ K A +L+ ++
Sbjct: 69 AQELTEKAEVLPKLIKWHFIGGLQSNKCKPLASTIPNLWVVSSIDSIKKATQLDLGRASL 128
Query: 151 ---GRKPLKVLVQVNTSGEE 167
PL V VQVNTSGEE
Sbjct: 129 SPPATTPLYVHVQVNTSGEE 148
>gi|229847062|ref|ZP_04467168.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
7P49H1]
gi|229810146|gb|EEP45866.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
7P49H1]
Length = 233
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A E + R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIEMACEEAKRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|423685143|ref|ZP_17659951.1| hypothetical protein VFSR5_0417 [Vibrio fischeri SR5]
gi|371495644|gb|EHN71239.1| hypothetical protein VFSR5_0417 [Vibrio fischeri SR5]
Length = 236
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 11/134 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
+ + ++ + ++ R PD ++++AVSKTKP+ ++ Q EAG R FGENYVQE +EK
Sbjct: 8 INQITHQIENSIQKCGRTPDSVQLLAVSKTKPIELLEQAIEAGQRIFGENYVQEGIEKVQ 67
Query: 99 ---AQLP-DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET-MGRK 153
Q P LEWHFIG +QSNK +P+ + V SV+ KIA RLN + +G
Sbjct: 68 YFQKQHPTTSLEWHFIGPIQSNKTRPI---AEHFDWVHSVERLKIAQRLNDQRPSELGE- 123
Query: 154 PLKVLVQVNTSGEE 167
L VL+QVNTS EE
Sbjct: 124 -LNVLIQVNTSSEE 136
>gi|333978623|ref|YP_004516568.1| hypothetical protein Desku_1183 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822104|gb|AEG14767.1| protein of unknown function UPF0001 [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 240
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 88/132 (66%), Gaps = 6/132 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L VI++V +AA+++ R P +++VAV+K V ++R+ AG FGEN VQE+V K
Sbjct: 7 LSHVIEQVTKAAKKAGRDPGSVKLVAVTKNVSVDIMREALAAGINAFGENRVQELVAKHP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP D+EWH IG+LQ+NKVK ++ V ++ S+D+ ++A ++R + G ++VLV
Sbjct: 67 QLPVDVEWHLIGHLQTNKVKYIIGKV---HLIHSLDSWRLAREISRRAQERGLT-VEVLV 122
Query: 160 QVNTSGEE--YG 169
QVN SGEE YG
Sbjct: 123 QVNISGEETKYG 134
>gi|238917083|ref|YP_002930600.1| hypothetical protein EUBELI_01153 [Eubacterium eligens ATCC 27750]
gi|238872443|gb|ACR72153.1| Hypothetical protein EUBELI_01153 [Eubacterium eligens ATCC 27750]
Length = 230
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + +A E+S R P+ + +VAVSKTKP ++ +VY+ G R FGENYVQE+V+K
Sbjct: 6 LIEVEEHIKKACEKSGRNPEDVCLVAVSKTKPKEMLMEVYDCGIRQFGENYVQEMVDKTD 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
LP D+ WH IG+LQ NKVK + V A++ SVD+E++A ++ + +K L +
Sbjct: 66 TLPKDITWHMIGHLQRNKVKYV---VGRAALIHSVDSERLAVAIS---DDAVKKGLVQDI 119
Query: 158 LVQVNTSGEE 167
L++VN +GEE
Sbjct: 120 LIEVNVAGEE 129
>gi|394990017|ref|ZP_10382849.1| hypothetical protein SCD_02442 [Sulfuricella denitrificans skB26]
gi|393790282|dbj|GAB72488.1| hypothetical protein SCD_02442 [Sulfuricella denitrificans skB26]
Length = 219
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 13/126 (10%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ QAA + RP I+++AVSKT P S +R Y AG R FGE+YVQE ++K L D
Sbjct: 4 RISQAATEAGRPVAGIQLLAVSKTFPASAVRLAYTAGQRAFGESYVQEAMDKVEALSDLP 63
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP----LKVLVQ 160
L+WHFIG +QSNK +P+ N A V S+D +IA RL + GR L+V +Q
Sbjct: 64 LKWHFIGPIQSNKTRPI---AENFAWVHSLDRARIADRL-----SAGRPSNLPDLQVCLQ 115
Query: 161 VNTSGE 166
VN SGE
Sbjct: 116 VNVSGE 121
>gi|119899756|ref|YP_934969.1| hypothetical protein azo3467 [Azoarcus sp. BH72]
gi|119672169|emb|CAL96083.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 237
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V +R+ AA + R P +R++AVSKT P +R+ AG R FGENYVQE + K A
Sbjct: 8 LQAVSERIRDAARAAGRDPAAVRLLAVSKTWPAQSVREAAAAGQRAFGENYVQEALAKLA 67
Query: 100 QLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
++ D LEWHFIG LQSNK + A + A V S+D K+A RL+ + PL V
Sbjct: 68 EVDDPALEWHFIGPLQSNKTR---AVAQHFAWVHSIDRLKLAERLSAQRDVH-LPPLNVC 123
Query: 159 VQVNTSGEE 167
+QVN SGE+
Sbjct: 124 LQVNVSGED 132
>gi|85060005|ref|YP_455707.1| hypothetical protein SG2027 [Sodalis glossinidius str. 'morsitans']
gi|84780525|dbj|BAE75302.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 231
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 81/134 (60%), Gaps = 17/134 (12%)
Query: 44 IQRVHQ----AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+QRVHQ AA+ R P +I ++AVSKTKPV+VI EAG R FGENYVQE VEK
Sbjct: 8 LQRVHQQIRTAAQDCGRDPRQITLLAVSKTKPVTVIEAAIEAGQRAFGENYVQEGVEKIG 67
Query: 100 QL---PD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGR 152
P+ L WHFIG LQSNK + + N ++D ++A RLN R VE R
Sbjct: 68 WFRERPEGAGLIWHFIGPLQSNKSRSV---AENFDWCHTLDRPQLARRLNDQRPVE---R 121
Query: 153 KPLKVLVQVNTSGE 166
PL VL+Q+N SGE
Sbjct: 122 APLNVLIQINISGE 135
>gi|91776460|ref|YP_546216.1| hypothetical protein Mfla_2108 [Methylobacillus flagellatus KT]
gi|91710447|gb|ABE50375.1| Protein of unknown function UPF0001 [Methylobacillus flagellatus
KT]
Length = 241
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 5/114 (4%)
Query: 54 SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGN 112
+ R PD + ++AVSK P S +R+++ AG R FGENY+QE + K QL D +EWHFIG
Sbjct: 28 AGRAPDSVSLLAVSKAHPASAMRELFLAGQRQFGENYLQEALAKQEQLQDLAIEWHFIGP 87
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+QSNK +P+ + V SVD KIA RLN E G+ L+V +QVN SGE
Sbjct: 88 IQSNKTQPI---AQHFHWVHSVDRAKIADRLNAAREP-GQTALQVCIQVNVSGE 137
>gi|268638068|ref|XP_001134585.2| hypothetical protein DDB_G0278713 [Dictyostelium discoideum AX4]
gi|284018110|sp|Q1ZXI6.2|PROSC_DICDI RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|256012994|gb|EAS66901.2| hypothetical protein DDB_G0278713 [Dictyostelium discoideum AX4]
Length = 255
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 89/142 (62%), Gaps = 15/142 (10%)
Query: 40 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENY+QE+V K
Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSK 69
Query: 98 AAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR---------- 145
+ +L ++++WHFIG++QSNK K +L V NL +VE+V+N+KI +L +
Sbjct: 70 SEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNN 128
Query: 146 MVETMGRKPLKVLVQVNTSGEE 167
K L +++QVNTSGEE
Sbjct: 129 NNNNNNNKKLNIMIQVNTSGEE 150
>gi|334132628|ref|ZP_08506385.1| hypothetical protein METUNv1_03471 [Methyloversatilis universalis
FAM5]
gi|333442594|gb|EGK70564.1| hypothetical protein METUNv1_03471 [Methyloversatilis universalis
FAM5]
Length = 228
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+++ R+ QAA R P I ++AVSKTKP + I + AG R FGENYVQE +KA
Sbjct: 7 LQAIRHRIEQAARACGRDPAGITLLAVSKTKPDADIIAAHAAGQRAFGENYVQEGCDKAQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+L +LEWHFIG +QSNK +P +AG V S+D EKIA RL+ + R PL
Sbjct: 67 RLEAAGLELEWHFIGPIQSNKTRP-VAGC--FDWVHSIDREKIAARLSEQRDPH-RPPLN 122
Query: 157 VLVQVNTSGEE 167
+ +QVN SGEE
Sbjct: 123 ICLQVNVSGEE 133
>gi|417949356|ref|ZP_12592492.1| hypothetical protein VISP3789_20470 [Vibrio splendidus ATCC 33789]
gi|342808314|gb|EGU43474.1| hypothetical protein VISP3789_20470 [Vibrio splendidus ATCC 33789]
Length = 234
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R P+ ++++AVSKTKP+ I + G FGENYVQE +K
Sbjct: 8 IEQITSQIRSAEQKCGRAPESVQLLAVSKTKPIDAILEAALGGQIAFGENYVQEGFDKVK 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +LEWHFIG +QSNK +P+ + A V S+D +KIA RLN + P
Sbjct: 68 HFSEQHSNLNLEWHFIGPIQSNKTRPI---AESFAWVHSIDRDKIAQRLNDQRPSE-LPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|411012170|ref|ZP_11388499.1| hypothetical protein AaquA_20855 [Aeromonas aquariorum AAK1]
Length = 233
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ QAA R+ R D I+++AVSKTKP+ + + Y AG R FGE+Y QE K
Sbjct: 8 LLQVKERIVQAASRAGRRGDHIQLLAVSKTKPLEAVCEAYAAGQRRFGESYAQEAATKID 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
L + D+EWHFIG LQSNK K + V+SVD EK+ RLN T G P
Sbjct: 68 TLREQGACTDIEWHFIGPLQSNKSKLV---AERFDWVQSVDREKLIERLNNQRPT-GLAP 123
Query: 155 LKVLVQVNTSGE 166
L V +Q+N SGE
Sbjct: 124 LNVCLQINISGE 135
>gi|417838778|ref|ZP_12485011.1| UPF0001 protein [Haemophilus haemolyticus M19107]
gi|341956451|gb|EGT82874.1| UPF0001 protein [Haemophilus haemolyticus M19107]
Length = 233
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A E ++R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIHQKIETACEEATRNQNIVKLLAVSKTKPISAILSAYQAGQIAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKTPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|403172978|ref|XP_003332086.2| YggS family pyridoxal phosphate enzyme [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170078|gb|EFP87667.2| YggS family pyridoxal phosphate enzyme [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 282
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 84/142 (59%), Gaps = 11/142 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA-GHRCFGENYVQEIVEKA 98
++ Q+V QAA S R +R+VAVSK KP S I +Y GH FGENYV E+ EK
Sbjct: 42 FNNINQQVEQAA--SGR---EVRLVAVSKLKPASDILTLYRTTGHLHFGENYVSELQEKV 96
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR----MVETMGRKP 154
LP D++WHFIG LQSNK K +L +PNL VE+VD+ A L + + ++ P
Sbjct: 97 KALPGDIKWHFIGALQSNKCK-ILGAIPNLFAVETVDSLHKAQLLEKSRSGLASSVQVNP 155
Query: 155 LKVLVQVNTSGEEYGECFIKCS 176
L+V +QVNTS E FI S
Sbjct: 156 LEVYLQVNTSEEASKAGFITPS 177
>gi|359438441|ref|ZP_09228461.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20311]
gi|359446821|ref|ZP_09236460.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20439]
gi|358026856|dbj|GAA64710.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20311]
gi|358039293|dbj|GAA72709.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20439]
Length = 237
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 82/135 (60%), Gaps = 16/135 (11%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ +AA+ + R + I ++AVSKTKPVS I YE G R FGE+YVQE V+K A
Sbjct: 17 LTSAYARIAEAAQNAQRNSNDITLLAVSKTKPVSDIMAAYEQGQRQFGESYVQEAVDKIA 76
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP--- 154
QL D+ WHFIG +QSNK L+A + V+SVD KIA RLN ++P
Sbjct: 77 QLGTFSDIVWHFIGPIQSNK-SALVAN--HFDWVQSVDRLKIAKRLN------AQRPQEL 127
Query: 155 --LKVLVQVNTSGEE 167
L VL+QVN S EE
Sbjct: 128 PALNVLIQVNISAEE 142
>gi|59711037|ref|YP_203813.1| hypothetical protein VF_0430 [Vibrio fischeri ES114]
gi|59479138|gb|AAW84925.1| predicted enzyme [Vibrio fischeri ES114]
Length = 236
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 11/134 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ + ++ R PD ++++AVSKTKP+ ++ Q EAG R FGENYVQE +EK
Sbjct: 8 INQITHQIENSIQKCGRNPDSVQLLAVSKTKPIELLEQAIEAGQRIFGENYVQEGIEKVQ 67
Query: 100 QL-----PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET-MGRK 153
LEWHFIG +QSNK +P+ + V SV+ KIA RLN + +G
Sbjct: 68 YFQKQHSTTSLEWHFIGPIQSNKTRPI---AEHFDWVHSVERLKIAQRLNDQRPSELGE- 123
Query: 154 PLKVLVQVNTSGEE 167
L VL+QVNTS EE
Sbjct: 124 -LNVLIQVNTSSEE 136
>gi|307202202|gb|EFN81689.1| Proline synthetase co-transcribed bacterial-like protein protein
[Harpegnathos saltator]
Length = 248
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 11/142 (7%)
Query: 36 AATALRSVIQRVHQAAERSSRPPDRI--RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
AA L+ V +++ +AA + + R+VAVSK + V I VY++G FGENYV E
Sbjct: 4 AAANLKLVYEKILRAASKKASEHRYFEPRLVAVSKLQSVESILSVYKSGQTHFGENYVNE 63
Query: 94 IVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
+VEKA+ Q +++WHFIGNLQ NKV +L VPNL ++E+VDNE++A LN +
Sbjct: 64 LVEKASHPQILQYGTEIKWHFIGNLQRNKVNKIL-NVPNLYIIETVDNERLANMLNNLWV 122
Query: 149 TMGRKP---LKVLVQVNTSGEE 167
+ L ++VQ+NTS E+
Sbjct: 123 KFRKNDDTKLNIMVQINTSQEK 144
>gi|1730919|sp|P52055.1|YPI1_VIBAL RecName: Full=UPF0001 protein in pilT-proC intergenic region;
AltName: Full=ORF1
gi|801880|dbj|BAA09062.1| FkuA [Vibrio alginolyticus]
Length = 233
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 9/120 (7%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LE 106
++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +E
Sbjct: 20 QKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIE 79
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
WHFIG +QSNK + L+A + V ++D KIA RLN + KPL+VL+QVNTSGE
Sbjct: 80 WHFIGPIQSNKSR-LVA--EHFDWVHTIDRTKIAQRLNDQRPS-ELKPLQVLIQVNTSGE 135
>gi|229593134|ref|YP_002875253.1| putative recemase [Pseudomonas fluorescens SBW25]
gi|229365000|emb|CAY53143.1| putative recemase [Pseudomonas fluorescens SBW25]
Length = 228
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R I ++AVSKTKP +R+ Y AG R FGENY+QE + K A+L
Sbjct: 11 VSQRIRAAADAVQRDASSIHLLAVSKTKPAPAVREAYAAGMRDFGENYLQEALGKQAELT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + A N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTR---AIAENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|254508623|ref|ZP_05120739.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
16]
gi|219548474|gb|EED25483.1| pyridoxal phosphate enzyme, YggS family [Vibrio parahaemolyticus
16]
Length = 237
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ RP + ++++AVSKTKPV I + AG FGENYVQE +K A
Sbjct: 8 IEQITSQIESAQQKCGRPRESVQLLAVSKTKPVDAILEAAHAGQVAFGENYVQEGADKVA 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ LEWHFIG +QSNK + + N A V +VD KIA RLN G P
Sbjct: 68 YFNEHHPELALEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAQRLNDQ-RPAGMPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLMQVNTSGE 135
>gi|448747687|ref|ZP_21729343.1| putative pyridoxal phosphate-dependent enzyme [Halomonas titanicae
BH1]
gi|445564799|gb|ELY20915.1| putative pyridoxal phosphate-dependent enzyme [Halomonas titanicae
BH1]
Length = 240
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 44 IQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP- 102
++R+H A E + R +++AVSKTKP ++IRQV++ G R FGENY+QE +EK A+L
Sbjct: 20 LERLHNALENAGRAQGAAKLLAVSKTKPAAMIRQVWQLGQREFGENYLQEALEKQAELTD 79
Query: 103 -DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D + WHFIG LQSNK + + + V SVD KIA RLN T PL + +Q+
Sbjct: 80 LDGIVWHFIGPLQSNKTRSV---AEHFDWVHSVDRLKIAKRLNEQRPTH-LAPLNICLQI 135
Query: 162 NTSGEE 167
N S EE
Sbjct: 136 NISREE 141
>gi|388468560|ref|ZP_10142770.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas synxantha
BG33R]
gi|388012140|gb|EIK73327.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas synxantha
BG33R]
Length = 231
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R I ++AVSKTKP +R Y AG R FGENY+QE + K A L
Sbjct: 11 VSQRIRAAADAVQRDASSIHLLAVSKTKPAQAVRDAYAAGMRDFGENYLQEALGKQADLT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|359451316|ref|ZP_09240722.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20480]
gi|358042869|dbj|GAA76971.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20480]
Length = 237
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L R+ AA+ + R D I ++AVSKTKP I Y G R FGE+YVQE V+K A
Sbjct: 17 LTCAYARISNAAKNTHRSKDEITLLAVSKTKPSDDIVAAYNYGQRQFGESYVQEAVDKIA 76
Query: 100 QL--PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
QL D+ WHFIG +QSNK L+A N V+SVD KIA RLN T + PL V
Sbjct: 77 QLHTYSDIIWHFIGPIQSNK-SALVA--ENFDWVQSVDRIKIAKRLNAQRPT-SKPPLNV 132
Query: 158 LVQVNTSGEE 167
L+QVN S EE
Sbjct: 133 LIQVNISAEE 142
>gi|324521624|gb|ADY47891.1| Proline synthase co-transcribed bacterial protein [Ascaris suum]
Length = 277
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 89/137 (64%), Gaps = 9/137 (6%)
Query: 37 ATALRSVIQRVHQAAER---SSRPPDRI-RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
AT LR V+ R+ + +E+ +SR RI +VAVSKTK ++++ Y+ G R FGENYVQ
Sbjct: 39 ATNLRVVLNRLKEVSEKAQGTSRWCGRIPMLVAVSKTKHPDLVKRCYDEGQRKFGENYVQ 98
Query: 93 EIVEKAAQLPDD---LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
E+ EKAA L +D +EWHFIG +QSNK+ LA + NL VE++ +EK L++ +
Sbjct: 99 ELQEKAAALANDCPHIEWHFIGQIQSNKIAK-LAAIQNLHCVETLSSEKHCTMLDKEMAK 157
Query: 150 MGRKPLKVLVQVNTSGE 166
GR+ + V VQ NTS E
Sbjct: 158 RGRR-INVYVQTNTSNE 173
>gi|169610101|ref|XP_001798469.1| hypothetical protein SNOG_08144 [Phaeosphaeria nodorum SN15]
gi|111063300|gb|EAT84420.1| hypothetical protein SNOG_08144 [Phaeosphaeria nodorum SN15]
Length = 269
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
Query: 23 AETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAG 82
AE M +A L S+ R+ +AA +S+R +R++AVSK KP + I +++
Sbjct: 2 AEEMQINAQRAKQLTENLTSITSRI-KAANKSNR---NVRLIAVSKLKPANDILALHQPP 57
Query: 83 ---HRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
H FGENYVQE++EK+ LP + WH IG LQSNK K L +PNL V SVD+EK
Sbjct: 58 NPLHTHFGENYVQELLEKSKLLPRSIRWHMIGGLQSNKCKQLAEQIPNLWCVSSVDSEKK 117
Query: 140 AGRLNRMVETMGRKP-----LKVLVQVNTSGEE 167
A L + + + K L+++VQVNTSGEE
Sbjct: 118 ANELEKGRKALIEKDNAVEKLRIMVQVNTSGEE 150
>gi|291546182|emb|CBL19290.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus sp. SR1/5]
Length = 230
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 90/139 (64%), Gaps = 16/139 (11%)
Query: 35 VAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
+ A L V + ++++ + +R P+ + ++AVSKTKPV ++++ Y+AG R FGEN VQEI
Sbjct: 1 MVAENLAQVQKNINESCNKINRDPNEVTLIAVSKTKPVEMLKEAYDAGARVFGENKVQEI 60
Query: 95 VEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
V+K Q+P D++WH IG+LQ NKVK + V +AM+ SVD+ ++A ET+ ++
Sbjct: 61 VDKYDQMPSDVKWHMIGHLQRNKVKYI---VDKVAMIHSVDSLRLA-------ETIEKEA 110
Query: 155 LK------VLVQVNTSGEE 167
K +L++VN + EE
Sbjct: 111 AKKAVIVPILIEVNVAQEE 129
>gi|119470546|ref|ZP_01613249.1| hypothetical protein ATW7_12046 [Alteromonadales bacterium TW-7]
gi|119446247|gb|EAW27524.1| hypothetical protein ATW7_12046 [Alteromonadales bacterium TW-7]
Length = 237
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL--PD 103
R+ AA+ + R D I ++AVSKTKP I Y G R FGE+YVQE V+K AQL
Sbjct: 23 RISNAAKNTHRSKDEITLLAVSKTKPSDDIVAAYNYGQRQFGESYVQEAVDKIAQLHTYS 82
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNT 163
D+ WHFIG +QSNK L+A N V+SVD KIA RLN T + PL VL+QVN
Sbjct: 83 DIIWHFIGPIQSNK-SALVA--ENFDWVQSVDRIKIAKRLNAQRPT-SKPPLNVLIQVNI 138
Query: 164 SGEE 167
S EE
Sbjct: 139 SAEE 142
>gi|365982669|ref|XP_003668168.1| hypothetical protein NDAI_0A07710 [Naumovozyma dairenensis CBS 421]
gi|343766934|emb|CCD22925.1| hypothetical protein NDAI_0A07710 [Naumovozyma dairenensis CBS 421]
Length = 297
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGH-RCFGENYVQEIVE 96
TA + I ++ Q + + + ++ VSK KP S I+ +Y+ H + FGENYVQE++E
Sbjct: 52 TAQYTHINQLIQTEQEKKNQNEHVLLLPVSKLKPASDIKILYDTLHIKEFGENYVQELME 111
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKP 154
K+ LP+D++WHFIG LQ+NK K LA +PNL VE++D+ K +LN R+ + P
Sbjct: 112 KSKLLPNDIKWHFIGGLQTNKCKD-LAKIPNLYCVETIDSLKKVKKLNESRLKFSEDADP 170
Query: 155 LKVLVQVNTSGEE 167
+ +Q+NTS EE
Sbjct: 171 INCYIQINTSNEE 183
>gi|67541707|ref|XP_664621.1| hypothetical protein AN7017.2 [Aspergillus nidulans FGSC A4]
gi|40742473|gb|EAA61663.1| hypothetical protein AN7017.2 [Aspergillus nidulans FGSC A4]
Length = 349
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 2 KNQEHEEERKRRENH---INEQVEAET--MAASAATDGVAATALRSVIQRVHQAAERSSR 56
K+ H R H + Q E + M AS + L SV R+ A+ +
Sbjct: 60 KSAPHPSNPNRIPKHSHCMTSQSEGQPVIMPASPSRTTTLLANLASVTSRIQSASSKLPL 119
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
P + R+VAVSK KP S I ++ H FGENY+QE+ EKA LP ++WHFIG LQ
Sbjct: 120 PKEP-RLVAVSKLKPASDILALHNPPTAHSHFGENYLQELQEKARLLPPTIKWHFIGGLQ 178
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLN-----RMVETMGRKPLKVLVQVNTSGEE 167
SNK L L VESVD+EK A L+ R E G + L+V VQVNTSGEE
Sbjct: 179 SNKCVSLARDTRALWAVESVDSEKKATLLDKGWGERKAEMGGEEKLRVFVQVNTSGEE 236
>gi|153001553|ref|YP_001367234.1| alanine racemase domain-containing protein [Shewanella baltica
OS185]
gi|151366171|gb|ABS09171.1| alanine racemase domain protein [Shewanella baltica OS185]
Length = 232
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 77/128 (60%), Gaps = 11/128 (8%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ QAA++ +R P I ++AVSKTKP+ I Y+AG RCFGENYVQE EK L
Sbjct: 13 RRIAQAAQKCARQPSSISLLAVSKTKPIEDIIAAYQAGQRCFGENYVQEGAEKIIALKGD 72
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D+EWHFIG LQSNK + + + +V +KIA RLN R E PL + +
Sbjct: 73 FPDIEWHFIGPLQSNKTSIV---AQHFDWMHTVSRDKIAQRLNDQRPAEL---APLNICI 126
Query: 160 QVNTSGEE 167
Q+N S E+
Sbjct: 127 QINISAED 134
>gi|147678163|ref|YP_001212378.1| hypothetical protein PTH_1828 [Pelotomaculum thermopropionicum SI]
gi|146274260|dbj|BAF60009.1| predicted enzyme [Pelotomaculum thermopropionicum SI]
Length = 226
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ AA R+ R P+ I++VAV+KT V IR+V G C GE+ VQE ++K
Sbjct: 7 LNRVRRRIDAAAGRAGRNPEEIKLVAVTKTVAVETIREVLSGGVCCLGESRVQEFLQKYG 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP +EWHFIG+LQ+NKVK ++ V +++ S+D +A L+R G +VLV
Sbjct: 67 QLPAGVEWHFIGHLQTNKVKKIIGKV---SLIHSLDRWSLAEALSRAACEAGTAA-RVLV 122
Query: 160 QVNTSGE--EYG 169
QVN +GE +YG
Sbjct: 123 QVNIAGEKTKYG 134
>gi|117919643|ref|YP_868835.1| hypothetical protein Shewana3_1194 [Shewanella sp. ANA-3]
gi|117611975|gb|ABK47429.1| Protein of unknown function UPF0001 [Shewanella sp. ANA-3]
Length = 238
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--- 102
R+ QAA++ +R P IR++AVSKTKP+ I Y AG RCFGENYVQE V K L
Sbjct: 14 RIAQAAQKCARLPHSIRLLAVSKTKPMEDIIAAYNAGQRCFGENYVQEGVTKIEALKATH 73
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK L+A + + ++ EKIA RLN PLKV +Q+N
Sbjct: 74 PDIEWHFIGPLQSNKTA-LVAQ--HFDWMHTLSREKIAQRLNEQ-RPAHLAPLKVCIQIN 129
Query: 163 TSGE 166
S E
Sbjct: 130 ISDE 133
>gi|436840763|ref|YP_007325141.1| conserved protein of unknown function [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169669|emb|CCO23040.1| conserved protein of unknown function [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 234
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + + V +AA R+ R P + ++AVSK P S I +Y AGHR FGE+YVQE + K
Sbjct: 12 LAEIKEEVAEAASRAGRKPGEVEVLAVSKLHPASDIEILYNAGHRLFGESYVQEALNKME 71
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D++WHFIG LQS K K +AG + V SVD+ K+AG +N+ + +L
Sbjct: 72 ELSGLDVDWHFIGGLQSKKAK-YVAG--KFSAVHSVDSSKLAGLINKKAAALDVVQ-NIL 127
Query: 159 VQVNTSGEE 167
+QVNT+GEE
Sbjct: 128 IQVNTAGEE 136
>gi|148980488|ref|ZP_01816085.1| Predicted enzyme with a TIM-barrel fold protein [Vibrionales
bacterium SWAT-3]
gi|145961213|gb|EDK26527.1| Predicted enzyme with a TIM-barrel fold protein [Vibrionales
bacterium SWAT-3]
Length = 234
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R P+ ++++AVSKTKP+ I + G FGENYVQE V+K
Sbjct: 8 IEQITSQIRSAEQKCGRAPESVQLLAVSKTKPIDAILEAALGGQVAFGENYVQEGVDKVK 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +LEWHFIG +QSNK +P+ + V SVD +KIA RLN + P
Sbjct: 68 HFSEQHSNLNLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLNDQRPSE-LPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|269965745|ref|ZP_06179842.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269829613|gb|EEZ83850.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 233
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 9/120 (7%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LE 106
++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +E
Sbjct: 20 QKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIE 79
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
WHFIG +QSNK + L+A + V ++D KIA RLN + KPL+VL+QVNTSGE
Sbjct: 80 WHFIGPIQSNKSR-LVA--EHFDWVHTIDRTKIAQRLNDQRPS-ELKPLQVLIQVNTSGE 135
>gi|259483672|tpe|CBF79253.1| TPA: alanine racemase family protein, putative (AFU_orthologue;
AFUA_4G04300) [Aspergillus nidulans FGSC A4]
Length = 272
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGH 83
M AS + L SV R+ A+ + P + R+VAVSK KP S I ++ H
Sbjct: 12 MPASPSRTTTLLANLASVTSRIQSASSKLPLPKEP-RLVAVSKLKPASDILALHNPPTAH 70
Query: 84 RCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL 143
FGENY+QE+ EKA LP ++WHFIG LQSNK L L VESVD+EK A L
Sbjct: 71 SHFGENYLQELQEKARLLPPTIKWHFIGGLQSNKCVSLARDTRALWAVESVDSEKKATLL 130
Query: 144 N-----RMVETMGRKPLKVLVQVNTSGEE 167
+ R E G + L+V VQVNTSGEE
Sbjct: 131 DKGWGERKAEMGGEEKLRVFVQVNTSGEE 159
>gi|24374863|ref|NP_718906.1| PLP-dependent amino acid racemase YggS [Shewanella oneidensis MR-1]
gi|24349558|gb|AAN56350.1| PLP-dependent amino acid racemase YggS [Shewanella oneidensis MR-1]
Length = 237
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 77/125 (61%), Gaps = 7/125 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA++ +R P I ++AVSKTKP++ I Y+AG RCFGENYVQE V K L
Sbjct: 14 RIAQAAQKCARLPHSIHLLAVSKTKPIADIIAAYDAGQRCFGENYVQEGVTKIESLKTTH 73
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK L+A + + ++ EKIA RLN PL V +Q+N
Sbjct: 74 PDIEWHFIGPLQSNKTT-LVAQ--HFDWMHTLSREKIALRLNEQ-RPANLAPLNVCIQIN 129
Query: 163 TSGEE 167
S E+
Sbjct: 130 ISDED 134
>gi|261492832|ref|ZP_05989379.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494803|ref|ZP_05991281.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309514|gb|EEY10739.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311514|gb|EEY12670.1| K+ uptake protein [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 249
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I++ E G R FGENYVQE +EK + DLEWHFIG LQSN
Sbjct: 46 DDVRLLAVSKTKPVEAIQEAIEGGQRAFGENYVQEAIEKIECFANRSDLEWHFIGPLQSN 105
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K K + A + +++VD KIA RL+ +G+ PL VL+Q+N S E
Sbjct: 106 KTKLVAA---HFDWIQTVDRLKIAERLSEQ-RPIGKAPLNVLIQINISDE 151
>gi|347531809|ref|YP_004838572.1| hypothetical protein RHOM_07635 [Roseburia hominis A2-183]
gi|345501957|gb|AEN96640.1| hypothetical protein RHOM_07635 [Roseburia hominis A2-183]
Length = 235
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V + V +A +R+ R + + ++AVSKTKP+ ++ ++Y G R FGEN VQE+ +K
Sbjct: 6 LKTVEEHVQEACKRAGRSREEVTLIAVSKTKPLEMLHEIYGEGVRDFGENKVQELCDKME 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLP D+ WH IG+LQ NKVK ++ V A++ SVD ++A +N + G + +LV
Sbjct: 66 QLPSDIRWHMIGHLQRNKVKYIVGKV---ALIHSVDTYRLAEEINIQAKKRG-IIVPILV 121
Query: 160 QVNTSGEE 167
+VN +GEE
Sbjct: 122 EVNIAGEE 129
>gi|329960818|ref|ZP_08299124.1| pyridoxal phosphate enzyme, YggS family [Bacteroides fluxus YIT
12057]
gi|328532419|gb|EGF59220.1| pyridoxal phosphate enzyme, YggS family [Bacteroides fluxus YIT
12057]
Length = 221
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P+ +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPEGVRLVAVSKFHPNEAIEEAYRAGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP +A++ VD+ K+ +NR MGR + L+Q++ + EE +G F
Sbjct: 71 TNKIKYI---VPYVALIHGVDSYKLLVEINRQAAKMGR-TVNCLLQLHIAREETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 EEC 129
>gi|218710629|ref|YP_002418250.1| hypothetical protein VS_2683 [Vibrio splendidus LGP32]
gi|218323648|emb|CAV19942.1| Hypothetical protein VS_2683 [Vibrio splendidus LGP32]
Length = 238
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R PD ++++AVSKTKP+ I + G FGENYVQE V+K
Sbjct: 8 IEQITSQIRSAEQKCGRAPDSVQLLAVSKTKPIDAILEAALGGQVAFGENYVQEGVDKVK 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGR 152
+ +LEWHFIG +QSNK +P+ + V SVD +KIA RL+ R E
Sbjct: 68 HFSEQHSNLNLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLHDQRPNEL--- 121
Query: 153 KPLKVLVQVNTSGEE 167
PL+VL+QVNTSGE+
Sbjct: 122 PPLQVLIQVNTSGED 136
>gi|258514369|ref|YP_003190591.1| alanine racemase domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257778074|gb|ACV61968.1| alanine racemase domain protein [Desulfotomaculum acetoxidans DSM
771]
Length = 225
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD 104
+R+ AA RS R PD I ++AV+K V +I+QVY+ G + FGEN VQE+ +K A LPDD
Sbjct: 12 ERIAAAACRSGRDPDDITLLAVTKNVSVDLIKQVYDCGFKEFGENRVQELQKKIALLPDD 71
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
WH IG+LQ+NK+K + + + ++ S+D+ +A +NR K ++VL+++N S
Sbjct: 72 AVWHMIGHLQTNKIKYI---IDKIGLIHSLDSLSLAREINRQALLQNMK-VQVLLEINIS 127
Query: 165 GEE 167
GE+
Sbjct: 128 GEQ 130
>gi|330815598|ref|YP_004359303.1| Alanine racemase domain protein [Burkholderia gladioli BSR3]
gi|327367991|gb|AEA59347.1| Alanine racemase domain protein [Burkholderia gladioli BSR3]
Length = 236
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +L SV +R+ AA + R P + ++AVSKT P +R+ + AG R FGENYVQE ++
Sbjct: 5 AASLASVHRRIDDAARSAGRAPGEVVLLAVSKTFPAEAVREAHAAGQRAFGENYVQEALD 64
Query: 97 KAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
K A L D L+WHFIG LQSNK + + V SVD KIA RL
Sbjct: 65 KIAALADLRASLDWHFIGPLQSNKTRVV---AEQFDWVHSVDRLKIAQRLAEQ-RPAHLP 120
Query: 154 PLKVLVQVNTSGEE 167
PL V VQVN SGE+
Sbjct: 121 PLNVCVQVNVSGED 134
>gi|86146413|ref|ZP_01064737.1| Predicted enzyme with a TIM-barrel fold [Vibrio sp. MED222]
gi|85835892|gb|EAQ54026.1| Predicted enzyme with a TIM-barrel fold [Vibrio sp. MED222]
Length = 238
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R PD ++++AVSKTKP+ I + G FGENYVQE V+K
Sbjct: 8 IEQITSQIRSAEQKCGRAPDSVQLLAVSKTKPIDAILEAALGGQVAFGENYVQEGVDKVK 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +LEWHFIG +QSNK +P+ + V SVD +KIA RL+ P
Sbjct: 68 HFSEQHSNLNLEWHFIGPIQSNKTRPI---AESFQWVHSVDRDKIAQRLHDQ-RPNELPP 123
Query: 155 LKVLVQVNTSGEE 167
L+VL+QVNTSGE+
Sbjct: 124 LQVLIQVNTSGED 136
>gi|282889722|ref|ZP_06298261.1| hypothetical protein pah_c004o075 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175996|ref|YP_004652806.1| hypothetical protein PUV_20020 [Parachlamydia acanthamoebae UV-7]
gi|281500296|gb|EFB42576.1| hypothetical protein pah_c004o075 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336480354|emb|CCB86952.1| UPF0001 protein aq_274 [Parachlamydia acanthamoebae UV-7]
Length = 225
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 9/133 (6%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDL 105
R+ + A + R D I ++AVSKT PV I+ VYEAG R FGE+ VQE ++K +LP D+
Sbjct: 14 RIEEYARKYGRASDEISLIAVSKTYPVESIQTVYEAGCRNFGESRVQEALQKQPRLPSDI 73
Query: 106 EWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSG 165
+WH IG+LQ NKV + V ++ SVD+ ++A +++ +G + +L+QVNTSG
Sbjct: 74 QWHLIGSLQLNKVSKI---VGKFTLIHSVDSFELAKKISETSLKLGVQT-SILLQVNTSG 129
Query: 166 EEYGECFIKCSWS 178
E K WS
Sbjct: 130 E-----LTKHGWS 137
>gi|395495396|ref|ZP_10426975.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas sp.
PAMC 25886]
Length = 228
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V +R+ AAE S R + ++AVSKTKP +R+ + AG R FGENY+QE + K A+L
Sbjct: 11 VSERIRAAAEASQRDASSVHLLAVSKTKPAHAVREAHAAGMRDFGENYLQEALGKQAELT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|338209820|ref|YP_004653867.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336303633|gb|AEI46735.1| protein of unknown function UPF0001 [Runella slithyformis DSM
19594]
Length = 245
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 21 VEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDRI----RIVAVSKTKPVSVIR 76
V+ E S + LR IQR AE + I R++AV+KTKPV ++
Sbjct: 3 VDVERFRKSTFFQPMKEVFLRPKIQRTMSIAENIQKIKAEIAPNARLIAVTKTKPVEMLM 62
Query: 77 QVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDN 136
+ YEAG +C+GEN VQE+V K QLP D+EWH IG+LQ+NKVK + P AM+ SVD+
Sbjct: 63 EAYEAGFKCYGENKVQEMVTKYEQLPKDIEWHLIGHLQTNKVKYI---APFAAMIHSVDS 119
Query: 137 EKIAGRLNR 145
K+ +N+
Sbjct: 120 FKLLQEINK 128
>gi|154248852|ref|YP_001409677.1| alanine racemase domain-containing protein [Fervidobacterium
nodosum Rt17-B1]
gi|154152788|gb|ABS60020.1| alanine racemase domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 235
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 5/126 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ + A + R PD I+IVAV+KT PV +I+ Y+ G R FGENY QE+ +K+ QL
Sbjct: 19 VMNKISEHALKVGRKPDEIKIVAVTKTHPVEIIKTAYDVGLRIFGENYAQELRDKSEQLN 78
Query: 103 -DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D+EWH+IG +Q+NK+K + VP ++ SV +N++ MG K K+L++V
Sbjct: 79 FPDIEWHYIGRIQTNKLKYI---VPVAYLIHSVYRINEIEEINKIASKMG-KIQKILIEV 134
Query: 162 NTSGEE 167
N SGEE
Sbjct: 135 NVSGEE 140
>gi|417842523|ref|ZP_12488605.1| UPF0001 protein [Haemophilus haemolyticus M21127]
gi|341951361|gb|EGT77933.1| UPF0001 protein [Haemophilus haemolyticus M21127]
Length = 233
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + + R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIHQKIETACKEAKRNQNTVKLLAVSKTKPISAILSAYQAGQIAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L +LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YLESQGINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+QVN S EE
Sbjct: 123 VLIQVNISDEE 133
>gi|339443313|ref|YP_004709318.1| putative enzyme with a TIM-barrel fold [Clostridium sp. SY8519]
gi|338902714|dbj|BAK48216.1| predicted enzyme with a TIM-barrel fold [Clostridium sp. SY8519]
Length = 230
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + QRV A R+ R P+ + ++AVSKTKP ++++ Y+AG R FGEN VQE+++K
Sbjct: 6 LKDIRQRVADACRRAGRNPETVTLIAVSKTKPAEMLQEAYDAGVRDFGENKVQEMMQKEE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP D+ WH IG+LQ NKVK L+ ++ SVD+ ++A ++R+ + +L+
Sbjct: 66 ILPADIRWHMIGHLQRNKVKYLMG---KTELIHSVDSLRLAEEISRL-SVKNQICTDILI 121
Query: 160 QVNTSGEE 167
+VN +GEE
Sbjct: 122 EVNIAGEE 129
>gi|325661586|ref|ZP_08150210.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|331084855|ref|ZP_08333943.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325472113|gb|EGC75327.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
4_1_37FAA]
gi|330410949|gb|EGG90371.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 233
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 10/131 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+S+ +V A +RS R P+ + ++AVSKTKPVS+++++Y+ G R FGEN VQE+ +K
Sbjct: 6 LKSIQDKVKDACKRSGRHPEDVTLIAVSKTKPVSMLQEIYDLGIRQFGENKVQELTDKYE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP---LK 156
+LP D+ WH IG+LQ NKVK L+ ++ SVD + RL +E K +
Sbjct: 66 KLPKDISWHMIGHLQRNKVKYLIGKT---TLIHSVD----SLRLAEAIEAEAAKKNCLVD 118
Query: 157 VLVQVNTSGEE 167
VL++VN +GEE
Sbjct: 119 VLIEVNVAGEE 129
>gi|419839787|ref|ZP_14363189.1| pyridoxal phosphate enzyme, YggS family [Haemophilus haemolyticus
HK386]
gi|386909063|gb|EIJ73744.1| pyridoxal phosphate enzyme, YggS family [Haemophilus haemolyticus
HK386]
Length = 233
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A E + R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIHQKIETAYEEAKRNQNTVKLLAVSKTKPISAILSAYQAGQIAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQDINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|410633855|ref|ZP_11344495.1| hypothetical protein GARC_4420 [Glaciecola arctica BSs20135]
gi|410146515|dbj|GAC21362.1| hypothetical protein GARC_4420 [Glaciecola arctica BSs20135]
Length = 227
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L+S+ V Q+ + RP + ++++AVSKTKPVS I Q YEAG R FGENYVQE VE
Sbjct: 5 AERLKSIQITVEQSTLDAHRPSNSVKLLAVSKTKPVSDIVQAYEAGQRLFGENYVQEGVE 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
K L DD+ WHFIG +QSNK + L+A + V+++D KIA RLN ++ K
Sbjct: 65 KIQGLHTLDDIVWHFIGPIQSNKTR-LVA--EHFDWVQTIDRLKIAQRLND--QSSPDKK 119
Query: 155 LKVLVQVNTSGE 166
L V +QVN +
Sbjct: 120 LNVCIQVNIDND 131
>gi|402574196|ref|YP_006623539.1| pyridoxal phosphate enzyme, YggS family [Desulfosporosinus meridiei
DSM 13257]
gi|402255393|gb|AFQ45668.1| pyridoxal phosphate enzyme, YggS family [Desulfosporosinus meridiei
DSM 13257]
Length = 232
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R++QAAERS R P IR++AVSK +PVS + + Y AG R F EN VQE +EKA
Sbjct: 11 LNEVRRRINQAAERSKRDPSTIRLLAVSKNQPVSSLEEAYRAGQRVFAENRVQEWLEKAP 70
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
LP+D +WH +G LQ+NKVK L +AM+ S+D + LN E R+ +
Sbjct: 71 NLPNDCQWHLVGRLQTNKVKYL---DDKIAMIHSLDRLPLLEALNIQGE---RRSIVWTT 124
Query: 158 LVQVNTS 164
LVQVN +
Sbjct: 125 LVQVNIA 131
>gi|392556592|ref|ZP_10303729.1| PLP-binding domain-containing protein [Pseudoalteromonas undina
NCIMB 2128]
Length = 237
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 16/135 (11%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ +AA+ + R + I ++AVSKTKPVS I YE G R FGE+YVQE V+K A
Sbjct: 17 LTSAYARIAEAAQNAQRNSNDITLLAVSKTKPVSDIMAAYEQGQRQFGESYVQEAVDKIA 76
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP--- 154
QL D+ WHFIG +QSNK L+A + V+SVD KIA RLN ++P
Sbjct: 77 QLATFSDIVWHFIGPIQSNK-SALVAN--HFDWVQSVDRLKIAKRLN------AQRPQEM 127
Query: 155 --LKVLVQVNTSGEE 167
L +L+QVN S E+
Sbjct: 128 PALNILIQVNISAED 142
>gi|242010392|ref|XP_002425952.1| predicted protein [Pediculus humanus corporis]
gi|212509935|gb|EEB13214.1| predicted protein [Pediculus humanus corporis]
Length = 228
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 17/132 (12%)
Query: 40 LRSVIQRVHQAAERSSRPPDRI--RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
L++V +R+ A + + I R+VAVSKTKP+ I + Y G R FGENYVQEI
Sbjct: 8 LKTVQERIRNACLKRAVNLSNIEPRLVAVSKTKPIESIIEAYNCGQRHFGENYVQEI--- 64
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM--GRKPL 155
WHFIG+LQ NKV LL+ +PNL VE+VD+EK+A LN K +
Sbjct: 65 ---------WHFIGHLQRNKVNKLLS-IPNLFAVETVDSEKLADALNNYFSKTEDENKKI 114
Query: 156 KVLVQVNTSGEE 167
+ +QVNTSGEE
Sbjct: 115 NIFIQVNTSGEE 126
>gi|399023674|ref|ZP_10725729.1| pyridoxal phosphate enzyme, YggS family [Chryseobacterium sp.
CF314]
gi|398082373|gb|EJL73127.1| pyridoxal phosphate enzyme, YggS family [Chryseobacterium sp.
CF314]
Length = 219
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ +++VAVSKT PVSVI++VY+ G + FGEN VQE++EK LP D++WH IG+LQ+NK
Sbjct: 15 PENVQLVAVSKTHPVSVIQEVYDLGQKVFGENKVQELMEKYPLLPKDIQWHLIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + + ++SVD+EK+ +N+ RK +KVL+QV + EE
Sbjct: 75 VKYITEFIDT---IQSVDSEKLLLEVNKEAGKHQRK-IKVLLQVKIAAEE 120
>gi|312963622|ref|ZP_07778103.1| protein of unknown function UPF0001 [Pseudomonas fluorescens WH6]
gi|311282131|gb|EFQ60731.1| protein of unknown function UPF0001 [Pseudomonas fluorescens WH6]
Length = 228
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V +R+ AA+ R + I ++AVSKTKP +R+ Y AG R FGENY+QE + K A+L
Sbjct: 11 VSRRIRAAADAVQRDANSIHLLAVSKTKPAQAVREAYAAGMRDFGENYLQEALGKQAELT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|452977086|gb|EME76859.1| hypothetical protein MYCFIDRAFT_53705 [Pseudocercospora fijiensis
CIRAD86]
Length = 258
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 84/149 (56%), Gaps = 16/149 (10%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAG--HRCFGENYVQEIVEKAAQ 100
V+QR+ A R SR ++R++AVSK KP + I ++++ FGENY E+ EKA
Sbjct: 18 VVQRIDSA--RGSR---KVRLIAVSKLKPATDILALHQSAVKQEHFGENYSDELTEKAGI 72
Query: 101 LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------MVETMGR 152
LP ++WH IG LQ+NK K L + VPNL V SVD K A L + ET+
Sbjct: 73 LPRSVKWHMIGGLQTNKCKKLASQVPNLYCVSSVDTSKKADELEKGRKTLVEQAKETLSE 132
Query: 153 KPLKVLVQVNTSGEEYGECFIKCSWSHSC 181
K L+VLVQVNTSGEE C + C
Sbjct: 133 K-LRVLVQVNTSGEESKSGVEPCEAATLC 160
>gi|451972140|ref|ZP_21925352.1| hypothetical protein C408_1964 [Vibrio alginolyticus E0666]
gi|451931978|gb|EMD79660.1| hypothetical protein C408_1964 [Vibrio alginolyticus E0666]
Length = 233
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 9/120 (7%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LE 106
++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +E
Sbjct: 20 QKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIE 79
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
WHFIG +QSNK + L+A + V ++D KIA RLN KPL+VL+QVNTSGE
Sbjct: 80 WHFIGPIQSNKSR-LVA--EHFDWVHTIDRTKIAQRLNDQ-RPNELKPLQVLIQVNTSGE 135
>gi|358067458|ref|ZP_09153937.1| YggS family pyridoxal phosphate enzyme [Johnsonella ignava ATCC
51276]
gi|356694374|gb|EHI56036.1| YggS family pyridoxal phosphate enzyme [Johnsonella ignava ATCC
51276]
Length = 226
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 85/128 (66%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+++ + + +A E+S R + ++++AVSKTKPV +I + YE G R FGEN V+E++ K
Sbjct: 6 LKTINENIEKACEKSGRKKEDVKLIAVSKTKPVDMINEAYELGIRDFGENKVKELLTKKE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QLPDD+ WH IG+LQ+NKV+ ++ V ++ SVD+ ++A ++ G + L+
Sbjct: 66 QLPDDICWHMIGHLQTNKVRSVIKAVK---LIHSVDSLRLADTIDIEARKAG-ITVDGLL 121
Query: 160 QVNTSGEE 167
+VN +GEE
Sbjct: 122 EVNVAGEE 129
>gi|54310240|ref|YP_131260.1| TIM-barrel fold family protein [Photobacterium profundum SS9]
gi|46914681|emb|CAG21458.1| Predicted enzyme with a TIM-barrel fold [Photobacterium profundum
SS9]
Length = 244
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ VI ++ + E+ R D ++++AVSKTKP++ I G R FGENYVQE VEK
Sbjct: 19 IEQVISQITSSTEKCGRTADSVQLLAVSKTKPIAAIDDAIAVGQRAFGENYVQEGVEKVQ 78
Query: 100 QL-----PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+++ WHFIG +QSNK +P+ + V SVD K A RLN + P
Sbjct: 79 HFAGHAQAEEIVWHFIGPIQSNKTRPI---AEHFDWVHSVDRIKTARRLNEQRPS-SMAP 134
Query: 155 LKVLVQVNTSGEE 167
L +L+QVNTSGEE
Sbjct: 135 LNILLQVNTSGEE 147
>gi|94469206|gb|ABF18452.1| proline synthetase co-transcribed protein-like protein [Aedes
aegypti]
Length = 258
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 11/115 (9%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA-----AQLPDDLEWHFIGNLQSNK 117
+VAVSKTKP+ +I Y G R FGENYVQE++EKA + D+ WHFIG+LQ+NK
Sbjct: 40 LVAVSKTKPIELILDGYSIGQRDFGENYVQELIEKANDPRILEHCKDIRWHFIGHLQTNK 99
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVE-TMGRKP----LKVLVQVNTSGEE 167
+ ++ +PNL M+++V N K+A LN+ E T KP L VL+Q+NTSGE+
Sbjct: 100 INKIV-NLPNLHMIQTVHNAKLAEGLNKAWEKTKAEKPEKQHLNVLIQINTSGED 153
>gi|388853442|emb|CCF52841.1| uncharacterized protein [Ustilago hordei]
Length = 941
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 10/132 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVEKA 98
++S +Q+ + P R+VA+SK P S I + +AG FGENYVQE+V+KA
Sbjct: 195 IQSAVQKGKEIGSAGEEP----RLVAISKLHPPSAILAAHKQAGQLHFGENYVQEMVDKA 250
Query: 99 AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG----RKP 154
LP ++ WHF+G LQSNK K LLA +PNL ++E++D+ K A L + + + +P
Sbjct: 251 KVLPREIRWHFVGGLQSNKGK-LLASIPNLYLLETLDSIKAANVLQKALSSPDAAKRDEP 309
Query: 155 LKVLVQVNTSGE 166
L+V +QVNTSGE
Sbjct: 310 LRVYLQVNTSGE 321
>gi|284036036|ref|YP_003385966.1| alanine racemase domain-containing protein [Spirosoma linguale DSM
74]
gi|283815329|gb|ADB37167.1| alanine racemase domain protein [Spirosoma linguale DSM 74]
Length = 219
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
D+ +++AV+KTKPV ++R+ YEAG R FGEN VQE+ EK QLPDD++WH IG+LQ+NKV
Sbjct: 15 DKAKLIAVTKTKPVELLREAYEAGCRRFGENKVQEMAEKQPQLPDDVQWHLIGHLQTNKV 74
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
K + P +A++ SVD+ K+ +N+ R + L+Q+ + EE
Sbjct: 75 KYI---APFVALIHSVDSLKLLQEINKQAAKSNR-VIDCLLQIYIADEE 119
>gi|117619465|ref|YP_858120.1| hypothetical protein AHA_3664 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560872|gb|ABK37820.1| conserved hypothetical protein TIGR00044 [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 233
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ QAA R+ R D I+++AVSKTKP+ + + Y AG R FGE+Y QE K
Sbjct: 8 LLQVKERIVQAASRAGRSRDHIQLLAVSKTKPLEAVCEAYAAGQRRFGESYAQEAATKID 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
L + D+EWHFIG LQSNK K + V+SVD EK+ RLN + G P
Sbjct: 68 TLREQGACADIEWHFIGPLQSNKSKLV---AERFDWVQSVDREKLIERLNNQRPS-GLAP 123
Query: 155 LKVLVQVNTSGE 166
L V +Q+N SGE
Sbjct: 124 LNVCLQINISGE 135
>gi|418293524|ref|ZP_12905432.1| TIM-barrel fold family protein [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379064915|gb|EHY77658.1| TIM-barrel fold family protein [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 229
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 78/127 (61%), Gaps = 9/127 (7%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ R P ++ ++AVSKT+P S IR + AG R FGENY+QE ++K A L
Sbjct: 11 VGTRIREAAQAVDRDPAKVGLLAVSKTQPASAIRGAFAAGARDFGENYLQEALDKQADLT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D L WHFIG +QSNK KP+ + V SVD KIA RL+ R E PL + +
Sbjct: 71 DLPLVWHFIGPIQSNKTKPI---AEHFDWVHSVDRLKIAQRLSDQRPAEL---PPLNICL 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|440232363|ref|YP_007346156.1| pyridoxal phosphate enzyme, YggS family [Serratia marcescens FGI94]
gi|440054068|gb|AGB83971.1| pyridoxal phosphate enzyme, YggS family [Serratia marcescens FGI94]
Length = 235
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V R+ +AAE +R P+ + ++AVSKTKPV+ + + EAG R FGENYVQE VEK
Sbjct: 8 LQDVRSRIARAAESCARAPEEVTLLAVSKTKPVAALAEAIEAGQRAFGENYVQEGVEKIQ 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
LEWHFIG LQSNK + L+A + A +VD KIA RLN P
Sbjct: 68 HFSAQPQGAALEWHFIGPLQSNKSR-LVA--EHFAWCHTVDRLKIAQRLNDQ-RPADMPP 123
Query: 155 LKVLVQVNTSGEE 167
L VL+Q+N S E+
Sbjct: 124 LNVLIQINISDEQ 136
>gi|262403913|ref|ZP_06080470.1| hypothetical protein VOA_001901 [Vibrio sp. RC586]
gi|262349875|gb|EEY99011.1| hypothetical protein VOA_001901 [Vibrio sp. RC586]
Length = 236
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKP+ I + +AG RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSAVQLLAVSKTKPIEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V +++ EKIA RLN G PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIEREKIALRLNEQ-RPAGMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|375266703|ref|YP_005024146.1| FkuA protein [Vibrio sp. EJY3]
gi|369842023|gb|AEX23167.1| FkuA protein [Vibrio sp. EJY3]
Length = 236
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 83/130 (63%), Gaps = 9/130 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----A 98
+ ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V+K A
Sbjct: 11 ITSQIRNDEQKCGRAPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVDKVQHFA 70
Query: 99 AQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
PD+ +EWHFIG +QSNK + L+A + V ++D KIA RLN +PL+V
Sbjct: 71 QHYPDNCIEWHFIGPIQSNKSR-LVA--EHFDWVHTIDRAKIAQRLNDQ-RPNELEPLQV 126
Query: 158 LVQVNTSGEE 167
L+QVNTSGE+
Sbjct: 127 LIQVNTSGED 136
>gi|120598147|ref|YP_962721.1| alanine racemase domain-containing protein [Shewanella sp. W3-18-1]
gi|146293781|ref|YP_001184205.1| alanine racemase domain-containing protein [Shewanella putrefaciens
CN-32]
gi|120558240|gb|ABM24167.1| alanine racemase domain protein [Shewanella sp. W3-18-1]
gi|145565471|gb|ABP76406.1| alanine racemase domain protein [Shewanella putrefaciens CN-32]
Length = 232
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA++ +R IR++AVSKTKP+ I Y AG RCFGENYVQE K +L
Sbjct: 14 RIAQAAQKCARQAHNIRLLAVSKTKPIEDIIAAYHAGQRCFGENYVQEGAAKITELSKNY 73
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK + + + +V +KIA RLN T PL V +Q+N
Sbjct: 74 PDIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIALRLNEQRPT-SMAPLNVCIQIN 129
Query: 163 TSGEE 167
S E+
Sbjct: 130 ISDED 134
>gi|386314528|ref|YP_006010693.1| PLP-dependent amino acid racemase, YggS [Shewanella putrefaciens
200]
gi|319427153|gb|ADV55227.1| PLP-dependent amino acid racemase, YggS [Shewanella putrefaciens
200]
Length = 239
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA++ +R IR++AVSKTKP+ I Y AG RCFGENYVQE K +L
Sbjct: 21 RIAQAAQKCARQAHNIRLLAVSKTKPIEDIIAAYHAGQRCFGENYVQEGAAKITELSKNY 80
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK + + + +V +KIA RLN T PL V +Q+N
Sbjct: 81 PDIEWHFIGPLQSNKTNIV---AQHFDWMHTVSRDKIALRLNEQRPT-SMAPLNVCIQIN 136
Query: 163 TSGEE 167
S E+
Sbjct: 137 ISDED 141
>gi|78486175|ref|YP_392100.1| hypothetical protein Tcr_1834 [Thiomicrospira crunogena XCL-2]
gi|78364461|gb|ABB42426.1| Conserved hypothetical protein; UPF0001 member [Thiomicrospira
crunogena XCL-2]
Length = 227
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 6/132 (4%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
++V +R+ A + ++R D I+++AVSKTKP+ I + + G R FGENYVQE ++K AQ
Sbjct: 10 QNVQKRIDDAMQSANRT-DHIQLLAVSKTKPIEDIIALADIGQRAFGENYVQEALDKIAQ 68
Query: 101 LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
P DLEWHFIG +QSNK KP+ N+ V SVD KIA RL+ PL +L++
Sbjct: 69 RP-DLEWHFIGPIQSNKTKPI---AENVQWVHSVDRFKIARRLSEQ-RPDNLPPLNILLE 123
Query: 161 VNTSGEEYGECF 172
VN S E F
Sbjct: 124 VNISNEASKAGF 135
>gi|407927123|gb|EKG20026.1| Alanine racemase [Macrophomina phaseolina MS6]
Length = 278
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 19/146 (13%)
Query: 41 RSVIQRVHQAAER---SSRPPDRIRIVAVSKTKPVSVIRQVYEA----GHRCFGENYVQE 93
R +++ + A+R +++ +R++AVSK KP + + ++ A R FGENY QE
Sbjct: 14 RELVENIAHVADRIKAANKTGRNVRLIAVSKLKPATDVLALHTAPAPHTQRHFGENYFQE 73
Query: 94 IVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM--- 150
+ EKAA LP + WHFIG LQ+NK KPL +PNL V SVD+ K A +L + +T+
Sbjct: 74 LQEKAAILPRSIRWHFIGALQTNKCKPLAEQIPNLFCVSSVDSAKKADQLEKGRKTLVEK 133
Query: 151 ---------GRKPLKVLVQVNTSGEE 167
+PL++ VQVNTSGEE
Sbjct: 134 KKQEGKEEEVSEPLRIQVQVNTSGEE 159
>gi|319775029|ref|YP_004137517.1| hypothetical protein HICON_03630 [Haemophilus influenzae F3047]
gi|329123064|ref|ZP_08251635.1| YggS family pyridoxal phosphate enzyme [Haemophilus aegyptius ATCC
11116]
gi|317449620|emb|CBY85826.1| conserved hypothetical protein [Haemophilus influenzae F3047]
gi|327471995|gb|EGF17435.1| YggS family pyridoxal phosphate enzyme [Haemophilus aegyptius ATCC
11116]
Length = 237
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQEVNLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|350536147|ref|NP_001233040.1| uncharacterized protein LOC100169371 [Acyrthosiphon pisum]
gi|239791204|dbj|BAH72101.1| ACYPI009997 [Acyrthosiphon pisum]
Length = 278
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 87/135 (64%), Gaps = 7/135 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
L V +R+ A++ R+VAVSKTKP+ I +Y+ G R FGENYVQE++ K+
Sbjct: 40 GLNDVRRRIEVVAQKRKEGNVEPRLVAVSKTKPIEHIIGIYQKGQRYFGENYVQELITKS 99
Query: 99 AQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
+ + D++WHFIG++Q NKV +L VP L ++E++D+EK+A +N + + ++
Sbjct: 100 SDVELLEKCRDIKWHFIGHIQKNKVSKVLM-VPGLHVIETIDSEKLANAVNDGWKKLNKE 158
Query: 154 P-LKVLVQVNTSGEE 167
LK++VQVNTS E+
Sbjct: 159 SKLKIMVQVNTSNEK 173
>gi|28872160|ref|NP_794779.1| hypothetical protein PSPTO_5046 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855414|gb|AAO58474.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 228
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAKRDPASVGLLAVSKTKPAGDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ G +PL
Sbjct: 65 KQLELADLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEGLEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|154322825|ref|XP_001560727.1| hypothetical protein BC1G_00755 [Botryotinia fuckeliana B05.10]
gi|347837095|emb|CCD51667.1| similar to alanine racemase family protein [Botryotinia fuckeliana]
Length = 265
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 87/143 (60%), Gaps = 24/143 (16%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVE 96
+A +SV +RV AA +R +R+VAVSK KP + I ++E A FGENY QE++E
Sbjct: 15 SAFQSVSERVTNAA--GTR---NVRLVAVSKLKPATDILALHEQANVEHFGENYAQELME 69
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR---- 152
KA LP ++WHFIG LQSNK KPL + V NL +V S+D++K A +L ++GR
Sbjct: 70 KAEILPRSIKWHFIGGLQSNKCKPLASTVFNLHLVSSIDSQKKASQL-----SLGRSLLP 124
Query: 153 ---------KPLKVLVQVNTSGE 166
PL + +Q+NTSGE
Sbjct: 125 MPADSNSPPSPLNIHIQLNTSGE 147
>gi|145633703|ref|ZP_01789429.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
3655]
gi|145635487|ref|ZP_01791187.1| hypothetical protein CGSHiAA_03736 [Haemophilus influenzae PittAA]
gi|144985463|gb|EDJ92284.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
3655]
gi|145267252|gb|EDK07256.1| hypothetical protein CGSHiAA_03736 [Haemophilus influenzae PittAA]
Length = 237
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEKNRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|340725255|ref|XP_003400988.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Bombus terrestris]
Length = 248
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 15/117 (12%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA-----AQLPDDLEWHFIGNLQSN 116
R+VAVSK K V +I Y+AG R FGENYV E+VEK + D+ WHFIG+LQ N
Sbjct: 32 RLVAVSKLKSVELIVDAYKAGQRHFGENYVNELVEKGNHSSILETCTDIRWHFIGHLQRN 91
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLN------RMVETMGRKPLKVLVQVNTSGEE 167
K+ LL PNL ++E++DNEK+A LN R+ E + LKV+VQVNTS E+
Sbjct: 92 KINKLLT-TPNLYIIETIDNEKLASALNTSWSKIRVHENL---KLKVMVQVNTSNEQ 144
>gi|300778396|ref|ZP_07088254.1| YggS family pyridoxal phosphate enzyme [Chryseobacterium gleum ATCC
35910]
gi|300503906|gb|EFK35046.1| YggS family pyridoxal phosphate enzyme [Chryseobacterium gleum ATCC
35910]
Length = 219
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +++VAVSKT P S +++VY+ G + FGEN VQE++EKA LP D++WH IG+LQ+NK
Sbjct: 15 PSTVQLVAVSKTHPASAVQEVYDLGQKVFGENKVQELMEKAPLLPQDIQWHLIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + P + ++SVD+EK+ +N+ R +KVL+QV + EE
Sbjct: 75 VKYI---APFIDTIQSVDSEKVLAEINKEAGKNNR-IIKVLLQVKIAAEE 120
>gi|157136632|ref|XP_001663799.1| proline synthetase associated protein [Aedes aegypti]
gi|108880985|gb|EAT45210.1| AAEL003491-PB [Aedes aegypti]
Length = 223
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 77/115 (66%), Gaps = 11/115 (9%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA-----AQLPDDLEWHFIGNLQSNK 117
+VAVSKTKP+ +I Y G R FGENYVQE++EKA + D+ WHFIG+LQ+NK
Sbjct: 40 LVAVSKTKPIELILDGYSIGQRDFGENYVQELIEKANDPRILEHCKDIRWHFIGHLQTNK 99
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRM-----VETMGRKPLKVLVQVNTSGEE 167
+ ++ +PNL M+++V N K+A LN+ VE ++ L VL+Q+NTSGE+
Sbjct: 100 INKIV-NLPNLHMIQTVHNAKLAEGLNKAWEKTKVEKPEKQQLNVLIQINTSGED 153
>gi|366996757|ref|XP_003678141.1| hypothetical protein NCAS_0I01290 [Naumovozyma castellii CBS 4309]
gi|342304012|emb|CCC71797.1| hypothetical protein NCAS_0I01290 [Naumovozyma castellii CBS 4309]
Length = 281
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
++++AVSK KP I+ +Y+ G R FGENYVQE++EKA LP D++WHFIG LQ+NK K
Sbjct: 64 VQLLAVSKLKPAGDIKILYDHGVREFGENYVQELIEKAEILPQDIKWHFIGGLQTNKCKD 123
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL--VQVNTSGEE 167
LA +PNL VE+VD+ K A +LN +L +Q+NTS EE
Sbjct: 124 -LAKIPNLYCVETVDSLKKAKKLNEARGKFQPDADAILCDIQINTSNEE 171
>gi|145642000|ref|ZP_01797572.1| hypothetical protein CGSHiR3021_00702 [Haemophilus influenzae
R3021]
gi|148825633|ref|YP_001290386.1| hypothetical protein CGSHiEE_02835 [Haemophilus influenzae PittEE]
gi|386265542|ref|YP_005829034.1| hypothetical protein R2846_0553 [Haemophilus influenzae R2846]
gi|145273271|gb|EDK13145.1| hypothetical protein CGSHiR3021_00702 [Haemophilus influenzae
22.4-21]
gi|148715793|gb|ABQ98003.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
PittEE]
gi|309972778|gb|ADO95979.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 237
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEKNRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|145631538|ref|ZP_01787306.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
R3021]
gi|144982883|gb|EDJ90400.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
R3021]
Length = 252
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEKNRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|328858513|gb|EGG07625.1| hypothetical protein MELLADRAFT_62402 [Melampsora larici-populina
98AG31]
Length = 262
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 9/141 (6%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA-GHRCFGENYV 91
D V L + ++++ + + +++ + +R+VAVSK KP S I +YE H FGENYV
Sbjct: 11 DEVRKKELMTNVKKIQEEVQNAAQGRN-VRLVAVSKLKPASDILGLYEGIQHLHFGENYV 69
Query: 92 QEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
E+VEKA LP D++WHFIG LQ+NK K +L +PNL VE+VD K A LN+ +
Sbjct: 70 SELVEKAKLLPQDIKWHFIGALQTNKCK-ILGSIPNLFAVETVDTIKKAEALNKSRSQLS 128
Query: 152 RKP------LKVLVQVNTSGE 166
+ LK+ +Q+NTS E
Sbjct: 129 QTSCNPIAKLKIYIQINTSNE 149
>gi|91228687|ref|ZP_01262601.1| FkuA [Vibrio alginolyticus 12G01]
gi|91187758|gb|EAS74076.1| FkuA [Vibrio alginolyticus 12G01]
Length = 233
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 78/120 (65%), Gaps = 9/120 (7%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL----PDD-LE 106
++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K PD+ +E
Sbjct: 20 QKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFSEHYPDNRIE 79
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
WHFIG +QSNK + L+A + V ++D KIA RLN + KPL+VL+QVNTSGE
Sbjct: 80 WHFIGPIQSNKSR-LVA--EHFDWVHTIDRTKIAQRLNDQRPS-ELKPLQVLIQVNTSGE 135
>gi|145639591|ref|ZP_01795195.1| hypothetical protein CGSHiII_10128 [Haemophilus influenzae PittII]
gi|145271382|gb|EDK11295.1| hypothetical protein CGSHiII_10128 [Haemophilus influenzae PittII]
gi|309750493|gb|ADO80477.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 237
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGVNLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|347966256|ref|XP_321478.5| AGAP001621-PA [Anopheles gambiae str. PEST]
gi|347966258|ref|XP_003435889.1| AGAP001621-PB [Anopheles gambiae str. PEST]
gi|333470142|gb|EAA00912.5| AGAP001621-PA [Anopheles gambiae str. PEST]
gi|333470143|gb|EGK97524.1| AGAP001621-PB [Anopheles gambiae str. PEST]
Length = 260
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 91/143 (63%), Gaps = 16/143 (11%)
Query: 39 ALRSVIQRVHQAAERS---SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
+R +Q++ + + S P + ++AVSKTKPV +I Y G R FGENYVQE+V
Sbjct: 14 GIRQTLQKIEETYNKRLALSNAPKPL-LIAVSKTKPVDLILNAYSVGQRDFGENYVQELV 72
Query: 96 EKA--AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
EKA A++ + D+ WHFIG+LQSNK+ ++ +PNL M+++V + K+A LN+ E +
Sbjct: 73 EKANDARILEHCQDIRWHFIGHLQSNKINKVI-NLPNLHMIQTVHSIKLAEGLNKAWEKV 131
Query: 151 ------GRKPLKVLVQVNTSGEE 167
++ L VLVQ+NTSGE+
Sbjct: 132 KAENAEKKQQLNVLVQINTSGED 154
>gi|378696225|ref|YP_005178183.1| hypothetical protein HIB_01480 [Haemophilus influenzae 10810]
gi|301168748|emb|CBW28339.1| predicted enzyme [Haemophilus influenzae 10810]
Length = 237
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|145637682|ref|ZP_01793336.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
PittHH]
gi|145269142|gb|EDK09091.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
PittHH]
Length = 237
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|16272064|ref|NP_438263.1| hypothetical protein HI0090 [Haemophilus influenzae Rd KW20]
gi|260580606|ref|ZP_05848433.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1723862|sp|P44506.1|Y090_HAEIN RecName: Full=UPF0001 protein HI_0090
gi|1573041|gb|AAC21768.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092668|gb|EEW76604.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 237
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|145219349|ref|YP_001130058.1| alanine racemase domain-containing protein [Chlorobium
phaeovibrioides DSM 265]
gi|145205513|gb|ABP36556.1| alanine racemase domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 232
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 87/140 (62%), Gaps = 17/140 (12%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
L+++ QR+ AA + R P IR++AVSKTKP +IR+ ++AGH FGE+Y+QE +EK
Sbjct: 7 GLQNIQQRIEAAAVEAGRDPASIRLIAVSKTKPAGMIREAFDAGHSLFGESYLQEFLEKR 66
Query: 99 AQ-----LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
LP +EWHFIG+LQSNKV+ ++ V +++ +D A L+R R+
Sbjct: 67 TDPLLEGLP--IEWHFIGHLQSNKVRSVIGKV---SLIHGIDKISTARELSRQAL---RQ 118
Query: 154 PL--KVLVQVNTSGE--EYG 169
L L++VNTSGE +YG
Sbjct: 119 NLHADYLLEVNTSGESTKYG 138
>gi|157136630|ref|XP_001663798.1| proline synthetase associated protein [Aedes aegypti]
gi|108880984|gb|EAT45209.1| AAEL003491-PA [Aedes aegypti]
Length = 258
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 15/142 (10%)
Query: 39 ALRSVIQRVHQAAERSS---RPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
+R + ++ +A + S + P + +VAVSKTKP+ +I Y G R FGENYVQE++
Sbjct: 14 GIRQTLAKIDEAFGKRSQTIKAPKPL-LVAVSKTKPIELILDGYSIGQRDFGENYVQELI 72
Query: 96 EKA-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM---- 146
EKA + D+ WHFIG+LQ+NK+ ++ +PNL M+++V N K+A LN+
Sbjct: 73 EKANDPRILEHCKDIRWHFIGHLQTNKINKIV-NLPNLHMIQTVHNAKLAEGLNKAWEKT 131
Query: 147 -VETMGRKPLKVLVQVNTSGEE 167
VE ++ L VL+Q+NTSGE+
Sbjct: 132 KVEKPEKQQLNVLIQINTSGED 153
>gi|345860011|ref|ZP_08812340.1| alanine racemase, N-terminal domain protein [Desulfosporosinus sp.
OT]
gi|344326872|gb|EGW38321.1| alanine racemase, N-terminal domain protein [Desulfosporosinus sp.
OT]
Length = 230
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ QA RS R P IR++AVSKT+PVS + Y+ G R F EN VQE +EKA
Sbjct: 7 LIKVRQRIDQAVARSKRDPSTIRLLAVSKTQPVSSLEGAYQTGQRAFAENRVQEWLEKAP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
LP+D EWH +G LQ+NKVK L N++++ S+D + LN E R+ +
Sbjct: 67 SLPNDCEWHLVGRLQTNKVKYL---DQNISLIHSLDRFSLLETLNEQGE---RRQMIWAT 120
Query: 158 LVQVNTS 164
LVQVN +
Sbjct: 121 LVQVNIA 127
>gi|167762344|ref|ZP_02434471.1| hypothetical protein BACSTE_00698 [Bacteroides stercoris ATCC
43183]
gi|167699987|gb|EDS16566.1| pyridoxal phosphate enzyme, YggS family [Bacteroides stercoris ATCC
43183]
Length = 222
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S PD +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 12 SELPDGVRLVAVSKFHPNEAIEEAYSAGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP + ++ VD+ K+ +NR GR + L+Q++ + EE +G F
Sbjct: 72 TNKIKYI---VPYVTLIHGVDSYKLLTEINRQAAKAGR-TVNCLLQLHIAQEESKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|443894488|dbj|GAC71836.1| proline synthetase co-transcribed protein [Pseudozyma antarctica
T-34]
Length = 955
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
Query: 62 RIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
R+VA+SK P S I + +AG FGENYVQE+V+KA LP ++ WHF+G LQSNK K
Sbjct: 217 RLVAISKLHPPSAILAAHRKAGQLHFGENYVQEMVDKAKVLPREIRWHFVGGLQSNKGK- 275
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMG----RKPLKVLVQVNTSGEE 167
LLA +PNL ++E++D+ K A L + + + +PL+V +QVNTSGE+
Sbjct: 276 LLASIPNLYLLETLDSIKAANVLQKALSSPDAAKRDEPLRVYLQVNTSGED 326
>gi|350404169|ref|XP_003487024.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Bombus impatiens]
Length = 248
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 15/117 (12%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA-----AQLPDDLEWHFIGNLQSN 116
R+VAVSK K V +I Y+AG R FGENYV E+VEK + D+ WHFIG+LQ N
Sbjct: 32 RLVAVSKLKSVELIVDAYKAGQRHFGENYVNELVEKGNHSSILETCTDIRWHFIGHLQRN 91
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLN------RMVETMGRKPLKVLVQVNTSGEE 167
K+ LL PNL ++E++DNEK+A LN R+ E + LK++VQVNTS E+
Sbjct: 92 KINKLLT-TPNLYIIETIDNEKLASALNTSWSKIRVHENL---KLKIMVQVNTSNEQ 144
>gi|37625084|gb|AAQ95748.1| conserved hypothetical protein [Aeromonas hydrophila]
Length = 233
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ QAA R+ R D I+++AVSKTKP+ + + Y AG R FGE+Y QE K
Sbjct: 8 LLQVKERIVQAASRAGRRGDHIQLLAVSKTKPLEAVCEAYAAGQRRFGESYAQEAATKID 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
L + D+EWHFIG LQSNK K + V+SVD EK+ RLN G P
Sbjct: 68 TLREQGTCTDIEWHFIGPLQSNKSKLV---AERFDWVQSVDREKLIERLNNQ-RPAGLAP 123
Query: 155 LKVLVQVNTSGE 166
L V +Q+N SGE
Sbjct: 124 LNVCLQINISGE 135
>gi|359434573|ref|ZP_09224836.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20652]
gi|357918782|dbj|GAA61085.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20652]
Length = 237
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ AA+ + R + + ++AVSKTKP + YE G R FGE+YVQE V+K A
Sbjct: 17 LTSAYARIANAAKNAQRNTNDVTLLAVSKTKPSDDVIAAYEHGQREFGESYVQEAVDKIA 76
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
QL D+ WHFIG +QSNK L+A N V+SVD KIA RLN ++PL +
Sbjct: 77 QLQSYSDIIWHFIGPIQSNK-SALVAA--NFDWVQSVDRIKIAKRLNSQ-RPDDKQPLNI 132
Query: 158 LVQVNTSGEE 167
L+QVN S EE
Sbjct: 133 LIQVNISNEE 142
>gi|422650723|ref|ZP_16713525.1| hypothetical protein PSYAC_04056 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330963808|gb|EGH64068.1| hypothetical protein PSYAC_04056 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 228
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++ VSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAKRDPASVGLLGVSKTKPAGDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ G +PL
Sbjct: 65 KQLELADLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPAGLEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|225572134|ref|ZP_03780998.1| hypothetical protein RUMHYD_00428 [Blautia hydrogenotrophica DSM
10507]
gi|225040400|gb|EEG50646.1| pyridoxal phosphate enzyme, YggS family [Blautia hydrogenotrophica
DSM 10507]
Length = 244
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 86/141 (60%), Gaps = 16/141 (11%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
D + + LR V +++ A RS R P + ++AVSKTKPV ++++ Y+AG R FGEN VQ
Sbjct: 13 DTMLSENLRDVEKKIEGACIRSGRNPKEVTLIAVSKTKPVEMLQEAYDAGAREFGENKVQ 72
Query: 93 EIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
EI K QLP D+ WH IG+LQ NKVK + V + M+ SVD+ ++A ET+ +
Sbjct: 73 EITAKYDQLPQDIHWHMIGHLQRNKVKYI---VDKVKMIHSVDSLRLA-------ETIDK 122
Query: 153 KPLK------VLVQVNTSGEE 167
+ K VL++VN + E+
Sbjct: 123 EAQKKNVVVPVLIEVNVAEED 143
>gi|340367806|ref|XP_003382444.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Amphimedon queenslandica]
Length = 250
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 86/133 (64%), Gaps = 7/133 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVEKA 98
++ V+ ++ + + RP R+ VAVSKTKP +IR + E G FGENY QE++EKA
Sbjct: 22 IKLVLDKMASLSLEAGRPVPRL--VAVSKTKPPEMIRVAHMEGGLLHFGENYAQELIEKA 79
Query: 99 AQ--LPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKP 154
L D D+ WHF+G+LQ NK LL+ VP L M+E++D ++A ++ ++ + K
Sbjct: 80 NHPLLSDLDIRWHFVGHLQRNKTNQLLSNVPKLWMIETIDTPRLASSVDGALQRINPDKK 139
Query: 155 LKVLVQVNTSGEE 167
L+VLVQVNTSGEE
Sbjct: 140 LRVLVQVNTSGEE 152
>gi|423694084|ref|ZP_17668604.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas fluorescens
SS101]
gi|388002350|gb|EIK63679.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas fluorescens
SS101]
Length = 228
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R I ++AVSKTKP +R+ Y AG R FGENY+QE + K A+L
Sbjct: 11 VSQRIRAAADAVQRDASSIHLLAVSKTKPAQAVREAYAAGLRDFGENYLQEALGKQAELT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + + A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AEHFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|148827239|ref|YP_001291992.1| hypothetical protein CGSHiGG_03010 [Haemophilus influenzae PittGG]
gi|148718481|gb|ABQ99608.1| hypothetical protein CGSHiGG_03010 [Haemophilus influenzae PittGG]
Length = 233
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|328872372|gb|EGG20739.1| hypothetical protein DFA_00602 [Dictyostelium fasciculatum]
Length = 229
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 85/129 (65%), Gaps = 7/129 (5%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
+ ++ R + + P + +VAVSKTKP +IR +YE G R FGENY+QE+ K+ +
Sbjct: 28 KDLVTRYDAIKSKITNP--NVTLVAVSKTKPSFMIRALYEHGQRHFGENYIQELQTKSDE 85
Query: 101 LPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D D++WHFIG++QSNK+K LL V +L ++E+++ + A +L + + P+ ++
Sbjct: 86 LSDLVDIKWHFIGSIQSNKLK-LLETVKSLHVIETIEKQSTADKLAK--SWPHQTPINIM 142
Query: 159 VQVNTSGEE 167
VQVNTSGE+
Sbjct: 143 VQVNTSGED 151
>gi|238918246|ref|YP_002931760.1| alanine racemase, N-terminal domain protein [Edwardsiella ictaluri
93-146]
gi|238867814|gb|ACR67525.1| alanine racemase, N-terminal domain protein [Edwardsiella ictaluri
93-146]
Length = 236
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V Q + +AAE+ R P I ++AVSKTKP+ I AG R FGENYVQE V K
Sbjct: 9 LDAVRQHIARAAEQCGRHPRDITLLAVSKTKPIEDIDAAIAAGQRAFGENYVQEGVSKIQ 68
Query: 100 ---QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
Q P D LEWHFIG LQSNK +P+ + + +VD KIA RLN KP
Sbjct: 69 HYRQQPQGDALEWHFIGPLQSNKSRPV---AEHFDWIHTVDRVKIAQRLNEQ-RPAQLKP 124
Query: 155 LKVLVQVNTSGEE 167
L VL+QVN S E+
Sbjct: 125 LNVLIQVNISDEQ 137
>gi|242238227|ref|YP_002986408.1| alanine racemase domain-containing protein [Dickeya dadantii
Ech703]
gi|242130284|gb|ACS84586.1| alanine racemase domain protein [Dickeya dadantii Ech703]
Length = 241
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 11/134 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V Q++ AAER R P+ I ++AVSKTKPV+ I AG R FGENYVQE VEK
Sbjct: 10 LQDVRQKISAAAERCGRAPEEITLLAVSKTKPVTAIEDAIAAGQRAFGENYVQEGVEKIL 69
Query: 100 ---QLPDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
Q D LEWHFIG LQSNK +P+ + ++D +IA RL+ + +T+
Sbjct: 70 YFRQTHQDIALEWHFIGPLQSNKSRPV---AEHFDWCHTIDRLRIAQRLSEQRPDTL--P 124
Query: 154 PLKVLVQVNTSGEE 167
PL VL+Q+N S EE
Sbjct: 125 PLNVLLQINISREE 138
>gi|392546379|ref|ZP_10293516.1| PLP-binding domain-containing protein [Pseudoalteromonas rubra ATCC
29570]
Length = 227
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 12/134 (8%)
Query: 42 SVIQRVHQAAERSSRPPDR------IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
++ +R++ A +R ++ + + ++AVSKTKPV +I Q Y AG R FGE+YVQE V
Sbjct: 3 TIAERLNNAYDRIAKAQQKCATDHEVALLAVSKTKPVELIEQAYAAGQRLFGESYVQEAV 62
Query: 96 EKA--AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
+K Q D+EWHFIG +QSNK + + + + V+SVD KIA RLN T
Sbjct: 63 DKVRHFQQQKDIEWHFIGPIQSNKSRLI---AEHFSWVQSVDRLKIARRLNEQRPT-NLM 118
Query: 154 PLKVLVQVNTSGEE 167
PLKVL+QVN S +E
Sbjct: 119 PLKVLIQVNISNDE 132
>gi|387771083|ref|ZP_10127255.1| pyridoxal phosphate enzyme, YggS family [Pasteurella bettyae CCUG
2042]
gi|386903002|gb|EIJ67823.1| pyridoxal phosphate enzyme, YggS family [Pasteurella bettyae CCUG
2042]
Length = 232
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 11/130 (8%)
Query: 44 IQRVHQAAERS----SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+Q +H+ + S R D ++++AVSKTKPV I Y+AG R FGENYVQE VEK
Sbjct: 7 LQNIHKNIQLSCLNHHRDRDSVKLLAVSKTKPVEDIETAYQAGQRAFGENYVQEGVEKIE 66
Query: 100 QLP---DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
D+EWHFIG LQSNK + L+A N ++++D KIA RLN + + PL
Sbjct: 67 YFKTKHTDIEWHFIGPLQSNKTR-LVA--ENFDWMQTLDRNKIASRLNEQ-RPVNKAPLN 122
Query: 157 VLVQVNTSGE 166
VL+Q+N S E
Sbjct: 123 VLIQINISDE 132
>gi|334703239|ref|ZP_08519105.1| hypothetical protein AcavA_04312 [Aeromonas caviae Ae398]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 81/135 (60%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ +AA R R PD I+++AVSKTKP+ I+ Y AG R FGE+Y QE
Sbjct: 5 AQHLLQVKERIVEAARRVGRSPDHIQLLAVSKTKPLGDIQAAYAAGQRRFGESYAQEAAL 64
Query: 97 KAAQLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L + D+EWHFIG LQSNK K L+A V+SVD +K+ RLN + G
Sbjct: 65 KIDALREQNACTDIEWHFIGPLQSNKSK-LVA--ERFDWVQSVDRDKLIERLNNQRPS-G 120
Query: 152 RKPLKVLVQVNTSGE 166
PL + +Q+N SGE
Sbjct: 121 LAPLNICLQINISGE 135
>gi|392553164|ref|ZP_10300301.1| PLP-binding domain-containing protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 228
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ R+ +A + S ++ ++AVSKTKP ++IR+ Y+AG R FGE+YVQE V+K A
Sbjct: 8 LKIAYDRIAKAIKNSHILGQKVALLAVSKTKPSTLIREAYQAGQRQFGESYVQEAVDKIA 67
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+L D D+EWHFIG +QSNK + A + V+SVD KIA RLN + R L V
Sbjct: 68 ELSDLSDIEWHFIGPIQSNKSAQVAA---HFNWVQSVDRIKIARRLNDQRPS-ERAKLNV 123
Query: 158 LVQVNTSGEE 167
L+QVN E+
Sbjct: 124 LIQVNIDDEQ 133
>gi|381395525|ref|ZP_09921222.1| hypothetical protein GPUN_2240 [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379328754|dbj|GAB56355.1| hypothetical protein GPUN_2240 [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 236
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--D 103
++ QAA + R P I+++AVSKTKPVS I Y GHR FGENYVQE VEK Q+
Sbjct: 22 QIKQAANANKRDPSHIKLLAVSKTKPVSDIVVAYAFGHRDFGENYVQEAVEKIQQMSSYS 81
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNT 163
D+ WHF+G LQSNK K L+A + S+D KIA RLN + + PL V VQVN
Sbjct: 82 DILWHFVGPLQSNKSK-LIAEY--FDWMHSLDRIKIAKRLNEQ-RSAHQSPLNVCVQVNI 137
Query: 164 SGEE 167
E+
Sbjct: 138 DDEQ 141
>gi|77361519|ref|YP_341094.1| PLP-binding domain-containing protein [Pseudoalteromonas
haloplanktis TAC125]
gi|76876430|emb|CAI87652.1| conserved protein of unknown function ; putative enzyme with
PLP-binding domain [Pseudoalteromonas haloplanktis
TAC125]
Length = 237
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ AA+ + R + I ++AVSKTKP + I Y+ G R FGE+YVQE V+K A
Sbjct: 17 LTSAYARIAVAAKNAQRNSNEITLLAVSKTKPSADIIAAYKHGQRQFGESYVQEAVDKIA 76
Query: 100 QL--PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
QL D+ WHFIG +QSNK L+A N A V+SVD KIA RLN + L V
Sbjct: 77 QLHAYSDIIWHFIGPIQSNK-SALVAA--NFAWVQSVDRIKIAKRLNSQ-RPADKAALNV 132
Query: 158 LVQVNTSGEE 167
L+QVN S EE
Sbjct: 133 LIQVNISNEE 142
>gi|422009899|ref|ZP_16356881.1| PLP-binding domain-containing protein [Providencia rettgeri Dmel1]
gi|414092072|gb|EKT53751.1| PLP-binding domain-containing protein [Providencia rettgeri Dmel1]
Length = 230
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V R+ AA R P I ++AVSKTKP I + EAG R FGENYVQE VEK
Sbjct: 7 ISDVTARIEHAAAECQRSPQDITLLAVSKTKPCEAILEAIEAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D DL WHFIG LQSNK + L+A + ++D KIA RLN + G+ PL V
Sbjct: 67 YFSDRNDLVWHFIGPLQSNKSR-LVA--EHFDWFHTLDRAKIAQRLNDQRPS-GKAPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|156307500|ref|XP_001617643.1| hypothetical protein NEMVEDRAFT_v1g225918 [Nematostella vectensis]
gi|156194985|gb|EDO25543.1| predicted protein [Nematostella vectensis]
Length = 228
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 15/127 (11%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ S R I ++AVSKTKP IRQ + AG R FGENY+QE +EK +L D
Sbjct: 14 RIREAAQASQRDCGSIGLLAVSKTKPAEAIRQAFAAGTRDFGENYLQEALEKQVELSDLP 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLV 159
L WHFIG +QSNK KP+ + A V SVD KIA RL+ ++P L + +
Sbjct: 74 LTWHFIGPIQSNKTKPI---AEHFAWVHSVDRLKIAQRLS------DQRPAHLPALNICL 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|429738369|ref|ZP_19272180.1| pyridoxal phosphate enzyme, YggS family [Prevotella saccharolytica
F0055]
gi|429160443|gb|EKY02907.1| pyridoxal phosphate enzyme, YggS family [Prevotella saccharolytica
F0055]
Length = 224
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 7/119 (5%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
R P D +R+VAVSK P + + Y+AG R FGE++VQE+ +KAA LP D++WHFIG+
Sbjct: 13 RDELPAD-VRLVAVSKYHPNAYLMDAYDAGQRIFGESHVQELSQKAASLPKDIQWHFIGH 71
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YG 169
LQ+NKVK + P ++M+E+VD+ K+ +NR E R + VL++++ + EE YG
Sbjct: 72 LQTNKVKYI---APYISMIEAVDSIKLLKEINRQAEKCER-VIDVLLELHIAEEETKYG 126
>gi|342905044|ref|ZP_08726837.1| UPF0001 protein [Haemophilus haemolyticus M21621]
gi|341951981|gb|EGT78526.1| UPF0001 protein [Haemophilus haemolyticus M21621]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A E + R + ++++AVSKTKP+S I Y+AG FGENYVQE +EK
Sbjct: 7 LNLIHQKIETACEEAKRNQNTVKLLAVSKTKPISAILSAYQAGQIAFGENYVQEGIEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN + + PL
Sbjct: 67 YFESQGINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQ-RPINKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|404495756|ref|YP_006719862.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
metallireducens GS-15]
gi|418066402|ref|ZP_12703766.1| alanine racemase domain protein [Geobacter metallireducens RCH3]
gi|78193371|gb|ABB31138.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Geobacter
metallireducens GS-15]
gi|373560663|gb|EHP86920.1| alanine racemase domain protein [Geobacter metallireducens RCH3]
Length = 231
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD 104
+R+ A R+ R P+ +R+VAVSKTKP + AG R FGENYVQE KA ++ +
Sbjct: 12 ERIATVARRAGRDPESVRLVAVSKTKPAEAVEDAARAGQRLFGENYVQEFTAKAGEVREP 71
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
+EWHFIG LQSNKV+ +AG+ + M+ SVD +A + R + VL+QVN +
Sbjct: 72 VEWHFIGALQSNKVRQ-IAGL--VTMIHSVDRLSLAQEIERQWAKLD-TTCDVLIQVNIA 127
Query: 165 GE 166
GE
Sbjct: 128 GE 129
>gi|374374116|ref|ZP_09631775.1| protein of unknown function UPF0001 [Niabella soli DSM 19437]
gi|373233558|gb|EHP53352.1| protein of unknown function UPF0001 [Niabella soli DSM 19437]
Length = 226
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 72/105 (68%), Gaps = 4/105 (3%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
+VAVSKTKPVS I+ +YE G R FGENYVQE+VEK A LP D+ WHFIG+LQSNKVK +
Sbjct: 22 LVAVSKTKPVSDIQALYELGQRDFGENYVQELVEKEAVLPKDIRWHFIGHLQSNKVKYI- 80
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
P + ++ VD+EK+ +++ R + L+QV+ + EE
Sbjct: 81 --APFVHLIHGVDSEKLLFEIDKQGAKNNR-TIDCLLQVHIAQEE 122
>gi|390567749|ref|ZP_10248067.1| alanine racemase domain-containing protein [Burkholderia terrae
BS001]
gi|420251781|ref|ZP_14754941.1| pyridoxal phosphate enzyme, YggS family [Burkholderia sp. BT03]
gi|389940303|gb|EIN02114.1| alanine racemase domain-containing protein [Burkholderia terrae
BS001]
gi|398057111|gb|EJL49087.1| pyridoxal phosphate enzyme, YggS family [Burkholderia sp. BT03]
Length = 232
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA+ + R P I ++AVSKT P +R + AG R FGENYVQE + K
Sbjct: 8 LDAVHQRIALAAQVAGRDPRSIALLAVSKTFPAEDVRAAHAAGQRAFGENYVQEALTKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D L+WHFIG LQSNK +P+ N V SVD KIA RL+ PL
Sbjct: 68 ALSDLRASLDWHFIGPLQSNKTRPV---AENFDWVHSVDRLKIAQRLSEQ-RPDALPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|331001802|ref|ZP_08325324.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412776|gb|EGG92159.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae oral taxon
107 str. F0167]
Length = 226
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 86/135 (63%), Gaps = 12/135 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+++ ++ A ERS+R D I ++AVSKTKP +I + YE+G R FGEN VQE++ K
Sbjct: 6 LKNIRDEMNNACERSNRNLDDITLIAVSKTKPNELIMEAYESGVRDFGENKVQELLRKKE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP---LK 156
+LPDD+ WH IG+LQ+NKV+ LL N ++ S+D + RL ++T RK +
Sbjct: 66 ELPDDVRWHMIGHLQTNKVRQLLG---NTVLIHSID----SIRLADTIDTEARKKGIHVD 118
Query: 157 VLVQVNTSGE--EYG 169
L+++N + E +YG
Sbjct: 119 GLLEINIAKEASKYG 133
>gi|66524764|ref|XP_623518.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Apis mellifera]
Length = 248
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 15/117 (12%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA-----AQLPDDLEWHFIGNLQSN 116
R+VAVSK KPV +I Y+AG R FGENYV E++EK + ++ WHFIG+LQ N
Sbjct: 32 RLVAVSKLKPVELIVDAYKAGQRHFGENYVNELLEKGNDPIILETCTNIHWHFIGHLQRN 91
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLN------RMVETMGRKPLKVLVQVNTSGEE 167
KV LL+ VPNL ++ES+DNEK+A +N R E + LKV+VQVNTS E+
Sbjct: 92 KVNKLLS-VPNLYVIESIDNEKLASAVNTSWINYRKDENL---KLKVMVQVNTSKEQ 144
>gi|127512070|ref|YP_001093267.1| alanine racemase domain-containing protein [Shewanella loihica
PV-4]
gi|126637365|gb|ABO23008.1| alanine racemase domain protein [Shewanella loihica PV-4]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 78/126 (61%), Gaps = 7/126 (5%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
QR+ QAA+ SSR I+++AVSKTKP+ I Y+AG R FGENYVQE EK L +
Sbjct: 13 QRIAQAAQNSSRDSREIQLLAVSKTKPIDQIVAAYDAGQRLFGENYVQEGEEKINALRES 72
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D+EWHFIG LQSNK K + + + ++ EKIA RL+ + PL+V +QV
Sbjct: 73 HGDIEWHFIGPLQSNKTKSI---AEHFDWMHTLSREKIAKRLSEQRPSH-LAPLQVCIQV 128
Query: 162 NTSGEE 167
N S E+
Sbjct: 129 NVSQEQ 134
>gi|258577879|ref|XP_002543121.1| hypothetical protein UREG_02637 [Uncinocarpus reesii 1704]
gi|237903387|gb|EEP77788.1| hypothetical protein UREG_02637 [Uncinocarpus reesii 1704]
Length = 297
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 25/183 (13%)
Query: 5 EHEEERKRRENHINEQVEAETMAASAATDGVAATA-----------LRSVIQRVHQAAER 53
E EE R E ++ + TM+ S+A + + L SV R+ A
Sbjct: 7 ETEERPIRTEYPVSNCARSPTMSTSSAAEPLTEMPSPSRTSALLANLSSVTSRISAAT-- 64
Query: 54 SSRPPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIG 111
+ P +R+VAVSK KP S I ++ H FGENY+QE++EK+ LP ++ WHFIG
Sbjct: 65 TGNP---VRLVAVSKLKPASDILALHSPPTSHIHFGENYLQELLEKSKILPPEIRWHFIG 121
Query: 112 NLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR-------MVETMGRKPLKVLVQVNTS 164
LQSNK L V L VESVD +K A L++ E ++PL+V VQVNTS
Sbjct: 122 GLQSNKCVTLARDVRGLWAVESVDTQKKASLLDKGWGERSNSQEGQQQEPLRVFVQVNTS 181
Query: 165 GEE 167
GEE
Sbjct: 182 GEE 184
>gi|424036634|ref|ZP_17775614.1| hypothetical protein VCHENC02_1933 [Vibrio cholerae HENC-02]
gi|408896414|gb|EKM32513.1| hypothetical protein VCHENC02_1933 [Vibrio cholerae HENC-02]
Length = 208
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 9/112 (8%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQS 115
++++AVSKTKPV I + Y++G FGENYVQE V K A PD+ +EWHFIG +QS
Sbjct: 1 MQLLAVSKTKPVEAILEAYQSGQEAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQS 60
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
NK +P+ + V ++D KIA RLN + KPL+VL+QVNTSGEE
Sbjct: 61 NKSRPV---AEHFDWVHTIDRAKIAQRLNDQRPS-ELKPLQVLIQVNTSGEE 108
>gi|237807739|ref|YP_002892179.1| alanine racemase domain-containing protein [Tolumonas auensis DSM
9187]
gi|237500000|gb|ACQ92593.1| alanine racemase domain protein [Tolumonas auensis DSM 9187]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ +++ A ++ R P+ I+++AVSKTKPV I++ Y+AG R FGE+YVQE + K
Sbjct: 8 LLAIKEQITSHARQAGRSPNEIKLLAVSKTKPVEAIQEAYQAGQRLFGESYVQEAITKIQ 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
QL + +EWHFIG LQSNK K L+A + V S+D EK A RLN
Sbjct: 68 QLNNSSDYAGIEWHFIGPLQSNKTK-LVA--EHFDWVHSIDREKTAQRLNEQ-RPANLPA 123
Query: 155 LKVLVQVNTSGE 166
L V +QVN SGE
Sbjct: 124 LNVCIQVNISGE 135
>gi|421082459|ref|ZP_15543342.1| Hypothetical protein Y17_3762 [Pectobacterium wasabiae CFBP 3304]
gi|401702696|gb|EJS92936.1| Hypothetical protein Y17_3762 [Pectobacterium wasabiae CFBP 3304]
Length = 237
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + Q++ AA+ +R P+ I ++AVSKTKPVS I + AG R FGENYVQE VEK
Sbjct: 8 LQDIRQQIATAAQHCARSPEDITLLAVSKTKPVSAIEEAIAAGQRAFGENYVQEGVEKVH 67
Query: 100 QL----PDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
PD LEWHFIG LQSNK + L+A N +VD +IA RL+ T P
Sbjct: 68 YFQENHPDTPLEWHFIGPLQSNKSR-LVAE--NFDWFHTVDRLRIAQRLSEQRPTT-LPP 123
Query: 155 LKVLVQVNTSGE 166
L +L+Q+N S E
Sbjct: 124 LNILLQINISSE 135
>gi|387896152|ref|YP_006326449.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas fluorescens
A506]
gi|387164101|gb|AFJ59300.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas fluorescens
A506]
Length = 228
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R I ++AVSKTKP +R+ Y AG R FGENY+QE + K A L
Sbjct: 11 VSQRIRAAADAVQRDASSIHLLAVSKTKPAQAVREAYAAGLRDFGENYLQEALGKQADLT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + + A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AEHFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|261822844|ref|YP_003260950.1| alanine racemase [Pectobacterium wasabiae WPP163]
gi|261606857|gb|ACX89343.1| alanine racemase domain protein [Pectobacterium wasabiae WPP163]
Length = 237
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + Q++ AA+ +R P+ I ++AVSKTKPVS I + AG R FGENYVQE VEK
Sbjct: 8 LQDIRQQIATAAQHCARSPEDITLLAVSKTKPVSAIEEAIAAGQRAFGENYVQEGVEKVH 67
Query: 100 QL----PDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
PD LEWHFIG LQSNK + L+A N +VD +IA RL+ T P
Sbjct: 68 YFQENHPDTPLEWHFIGPLQSNKSR-LVAE--NFDWFHTVDRLRIAQRLSEQRPTT-LPP 123
Query: 155 LKVLVQVNTSGE 166
L +L+Q+N S E
Sbjct: 124 LNILLQINISSE 135
>gi|385873286|gb|AFI91806.1| UPF0001 protein yggS [Pectobacterium sp. SCC3193]
Length = 237
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + Q++ AA+ +R P+ I ++AVSKTKPVS I + AG R FGENYVQE VEK
Sbjct: 8 LQDIRQQIATAAQHCARSPEDITLLAVSKTKPVSAIEEAIAAGQRAFGENYVQEGVEKVH 67
Query: 100 QL----PDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
PD LEWHFIG LQSNK + L+A N +VD +IA RL+ T P
Sbjct: 68 YFQENHPDTPLEWHFIGPLQSNKSR-LVAE--NFDWFHTVDRLRIAQRLSEQRPTT-LPP 123
Query: 155 LKVLVQVNTSGE 166
L +L+Q+N S E
Sbjct: 124 LNILLQINISSE 135
>gi|452852708|ref|YP_007494392.1| conserved protein of unknown function [Desulfovibrio piezophilus]
gi|451896362|emb|CCH49241.1| conserved protein of unknown function [Desulfovibrio piezophilus]
Length = 235
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 82/124 (66%), Gaps = 7/124 (5%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+ + +AA+++ R PD I +VAVSK P S IR + E GH FGENYVQE V+K L D
Sbjct: 17 EELAEAAKKAGRTPDDITLVAVSKLHPASDIRALAETGHVDFGENYVQEAVDKQKTLADL 76
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK-VLVQVN 162
+ WHFIG LQSNK K +AG +V SVD+ K+A L+R + +G++ ++ +L+QVN
Sbjct: 77 KVNWHFIGGLQSNKAK-FVAG--KFGLVHSVDSLKLAQALSR--KALGQETVQDILIQVN 131
Query: 163 TSGE 166
+GE
Sbjct: 132 IAGE 135
>gi|91794033|ref|YP_563684.1| hypothetical protein Sden_2682 [Shewanella denitrificans OS217]
gi|91716035|gb|ABE55961.1| Protein of unknown function UPF0001 [Shewanella denitrificans
OS217]
Length = 235
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 78/126 (61%), Gaps = 9/126 (7%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE----IVEKAAQL 101
R+ QA + RP + ++AVSKTKP+S I Q Y+AG R FGENYVQE I++ A
Sbjct: 14 RIAQAEQEHHRPAQSVNLLAVSKTKPLSDIIQAYQAGQRRFGENYVQEGQQKIIDLAQDY 73
Query: 102 PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
P D+EWHFIG LQSNK + + + + ++ EKIA RL++ + PL V +QV
Sbjct: 74 P-DIEWHFIGPLQSNKTRII---AEHFHWLHTLGREKIAQRLHQQ-RPQDKPPLNVCIQV 128
Query: 162 NTSGEE 167
N SGE+
Sbjct: 129 NISGED 134
>gi|253745137|gb|EET01241.1| PLP dependent enzymes class III [Giardia intestinalis ATCC 50581]
Length = 220
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 76/108 (70%), Gaps = 6/108 (5%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKV 118
+++AVSKTKP+ + + Y AG R FGENYVQE++ K D D+EWHFIG+LQ+NKV
Sbjct: 19 KLIAVSKTKPIGAVLEAYAAGQRLFGENYVQELIGKTEATQDVASDIEWHFIGHLQTNKV 78
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ +A +PN ++++VD++++A RLN L+V++Q+NTSGE
Sbjct: 79 RD-VALIPN-CVIQTVDSDRLARRLND-ARPDNLDLLRVMIQINTSGE 123
>gi|210612737|ref|ZP_03289452.1| hypothetical protein CLONEX_01654 [Clostridium nexile DSM 1787]
gi|210151430|gb|EEA82438.1| hypothetical protein CLONEX_01654 [Clostridium nexile DSM 1787]
Length = 231
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 85/130 (65%), Gaps = 8/130 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V +++ A +R+ R + ++AVSKTKP+S+++++Y G RCFGEN VQE+ EK
Sbjct: 6 LQQVEEKIADACKRAKRERSEVTLIAVSKTKPISMLQEIYNEGIRCFGENKVQELTEKYE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
QLP D++WH IG+LQ NKVK + V ++ SVD+ ++A +N + +K + +
Sbjct: 66 QLPSDIKWHMIGHLQRNKVKYI---VDKTELIHSVDSLRLAETIN---QEAAKKDVVSNI 119
Query: 158 LVQVNTSGEE 167
L++VN + EE
Sbjct: 120 LIEVNVAEEE 129
>gi|50287463|ref|XP_446161.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525468|emb|CAG59085.1| unnamed protein product [Candida glabrata]
Length = 265
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
Query: 31 ATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENY 90
A D V L S V + + ++AVSK KP S ++ +Y+ G R FGENY
Sbjct: 20 AYDSVRQKQLVSQFLEVENRVQSEVNGSKSVLLLAVSKLKPASDVQILYDHGVRDFGENY 79
Query: 91 VQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETM 150
VQE++EKA LP D+ WHFIG LQ+NK K LA VPNL VE+VD+ K A +LN E
Sbjct: 80 VQELIEKAELLPTDIRWHFIGGLQTNKCKD-LAKVPNLFSVETVDSLKKAKKLN---EAR 135
Query: 151 GR-----KPLKVLVQVNTSGEE 167
G+ + +Q+NTS E+
Sbjct: 136 GKYQPDANAISCNIQINTSQED 157
>gi|145629031|ref|ZP_01784830.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
22.1-21]
gi|144978534|gb|EDJ88257.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
22.1-21]
Length = 236
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGVNLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRVKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|422659871|ref|ZP_16722292.1| hypothetical protein PLA106_20818 [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331018485|gb|EGH98541.1| hypothetical protein PLA106_20818 [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 228
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++A SKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAKRDPASVGMLAGSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ G +PL
Sbjct: 65 KQLELADLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEGLEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|256425243|ref|YP_003125896.1| alanine racemase [Chitinophaga pinensis DSM 2588]
gi|256040151|gb|ACU63695.1| alanine racemase domain protein [Chitinophaga pinensis DSM 2588]
Length = 225
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P ++VAVSK KP S I+ +Y+AG R FGENYVQE+ EK LP D+EWHFIG+LQSNK
Sbjct: 17 PYNAKLVAVSKIKPASDIQALYDAGQRIFGENYVQELQEKQPLLPADIEWHFIGHLQSNK 76
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + P ++MV +VD+ K+ +++ R ++ L+QV+ + EE
Sbjct: 77 VKYI---APFVSMVHAVDSLKLLEEISKQAAKHNRM-IRCLLQVHIATEE 122
>gi|78186366|ref|YP_374409.1| hypothetical protein Plut_0478 [Chlorobium luteolum DSM 273]
gi|78166268|gb|ABB23366.1| Protein of unknown function UPF0001 [Chlorobium luteolum DSM 273]
Length = 229
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 18/146 (12%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
+G+A+ L + +RVH AA + R P +R++AVSKTKP +IR+ ++AG FGE+Y+Q
Sbjct: 2 EGIASNLLE-IRRRVHDAARAAGRDPSAVRLIAVSKTKPAGMIREAFDAGQTLFGESYLQ 60
Query: 93 EIVEKAAQLPDD-------LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR 145
E +EK DD LEWHFIG+LQSNKV+ ++ V +++ +D A L++
Sbjct: 61 EFLEKC----DDAELEGCPLEWHFIGHLQSNKVRSVIGRV---SLIHGIDKVSTAEELSK 113
Query: 146 MVETMGRKPLKVLVQVNTSGE--EYG 169
G L+++NTSGE +YG
Sbjct: 114 QAVKRGINA-DYLLEINTSGEATKYG 138
>gi|347536762|ref|YP_004844187.1| hypothetical protein FBFL15_1901 [Flavobacterium branchiophilum
FL-15]
gi|345529920|emb|CCB69950.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
Length = 220
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
+S PP + +VAVSKTKPV+ + + Y AG R FGENYVQE+VEK +LP D+ WHFIG+
Sbjct: 11 KSQLPP-HVTLVAVSKTKPVADLMEAYNAGQRIFGENYVQEVVEKQQELPQDILWHFIGH 69
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
LQS KVK + P +A++ VD+ K+ +N+ E R + L+QV + E+
Sbjct: 70 LQSRKVKNI---APFVALIHGVDSFKLLQEINKQAEKNNR-IIDCLLQVYIAEED 120
>gi|300723967|ref|YP_003713281.1| hypothetical protein XNC1_3109 [Xenorhabdus nematophila ATCC 19061]
gi|297630498|emb|CBJ91163.1| putative enzyme with PLP-binding domain [Xenorhabdus nematophila
ATCC 19061]
Length = 231
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V R+ A++ R P+ I ++AVSKTKPV I + +G R FGENYVQE VEK
Sbjct: 8 LHDVRNRIALVAQKCGRIPEEITLLAVSKTKPVDDIAKAIASGQREFGENYVQEGVEKIQ 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLK 156
DDL WHFIG LQSNK + L+A N ++D KIA RLN + E M PL
Sbjct: 68 HFDNHDDLVWHFIGPLQSNKSR-LVA--ENFDWCHTIDRLKIAERLNEQRPENMA--PLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N SGEE
Sbjct: 123 VLIQINISGEE 133
>gi|307183253|gb|EFN70122.1| Proline synthetase co-transcribed bacterial-like protein protein
[Camponotus floridanus]
Length = 248
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 82/142 (57%), Gaps = 13/142 (9%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRI--RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
A L+SV ++ AA + + R+VAVSK + I Y+AG R FGENYV E+
Sbjct: 5 AANLKSVCDKILYAATKRTSEHQYYEPRLVAVSKLQSTESILSAYKAGQRHFGENYVNEL 64
Query: 95 VEKAAQLPDDLE------WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
VEKA P LE WHFIGNLQ NKV +L+ VPNL ++ESV NEK+A LN
Sbjct: 65 VEKALN-PQILEKCKEIQWHFIGNLQRNKVNKILS-VPNLYIIESVGNEKLADLLNNSWP 122
Query: 149 TMGRKP---LKVLVQVNTSGEE 167
+ L V+VQVNTS EE
Sbjct: 123 KFRKSDNCKLNVMVQVNTSQEE 144
>gi|68248701|ref|YP_247813.1| hypothetical protein NTHI0168 [Haemophilus influenzae 86-028NP]
gi|68056900|gb|AAX87153.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 237
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISEILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGVNLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|254230227|ref|ZP_04923619.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262393230|ref|YP_003285084.1| hypothetical protein VEA_002457 [Vibrio sp. Ex25]
gi|151937259|gb|EDN56125.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262336824|gb|ACY50619.1| hypothetical protein VEA_002457 [Vibrio sp. Ex25]
Length = 233
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 9/120 (7%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LE 106
++ R P+ ++++AVSKTKPV I + ++AG FGENYVQE V K A PD+ +E
Sbjct: 20 QKFGRTPESVQLLAVSKTKPVEAILEAHQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIE 79
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
WHFIG +QSNK + L+A + V ++D KIA RLN + KPL+VL+QVNTSGE
Sbjct: 80 WHFIGPIQSNKSR-LVA--EHFDWVHTIDRTKIAQRLNDQRPS-ELKPLQVLIQVNTSGE 135
>gi|443641204|ref|ZP_21125054.1| Pyridoxal phosphate-binding enzyme, YggS family protein
[Pseudomonas syringae pv. syringae B64]
gi|443281221|gb|ELS40226.1| Pyridoxal phosphate-binding enzyme, YggS family protein
[Pseudomonas syringae pv. syringae B64]
Length = 228
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKP 154
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ + ET+ +P
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQRPETL--EP 119
Query: 155 LKVLVQVNTSGE 166
L + +QVN SGE
Sbjct: 120 LNICIQVNVSGE 131
>gi|383450419|ref|YP_005357140.1| hypothetical protein KQS_05590 [Flavobacterium indicum GPTSA100-9]
gi|380502041|emb|CCG53083.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 230
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S+ P+ + +VAVSKTKP+S + + Y AG R FGENYVQE+V+K Q+P D+EWHFIG+LQ
Sbjct: 12 SQLPEGVTLVAVSKTKPISDLMEAYNAGQRIFGENYVQELVDKHEQMPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
S K K L+A P ++++ VD+ K+ +N+ + R + L+QV+ + EE
Sbjct: 72 SRKAK-LIA--PFVSLIHGVDSLKLLEEINKQAQKNNR-IVDCLLQVHIAEEE 120
>gi|257483589|ref|ZP_05637630.1| hypothetical protein PsyrptA_10063, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 137
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPAGDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|312883848|ref|ZP_07743565.1| TIM-barrel fold family protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368306|gb|EFP95841.1| TIM-barrel fold family protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 238
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ ++ R D ++++AVSKTKPV I + AG R FGENYVQE EK A
Sbjct: 8 IEQITSQIEAIKQKCHRTQDTVQLLAVSKTKPVDAILEAANAGQRAFGENYVQEGTEKVA 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+LEWHFIG +QSNK + + N V SV+ K+A RLN G P
Sbjct: 68 YFASHHPELELEWHFIGPIQSNKSRYV---AENFHWVHSVNKAKLAQRLNDQ-RPEGLPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|222054661|ref|YP_002537023.1| alanine racemase [Geobacter daltonii FRC-32]
gi|221563950|gb|ACM19922.1| alanine racemase domain protein [Geobacter daltonii FRC-32]
Length = 230
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L + +R+ +AA ++ R P +R+V VSK + S + AG R FGENYVQE+V
Sbjct: 4 ADNLGQIEKRIEKAAVKAGREPASVRLVVVSKMQQPSAVDDAARAGQRLFGENYVQELVS 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
K +Q+ + + WHFIG+LQSNKV+ +AG+ + M+ SVD +A ++R + +GR
Sbjct: 64 KVSQVGEQVTWHFIGSLQSNKVRQ-IAGL--VEMIHSVDRLSLAREIDRQWQKLGRI-CN 119
Query: 157 VLVQVNTSGE 166
VLVQVN +GE
Sbjct: 120 VLVQVNVAGE 129
>gi|359300560|ref|ZP_09186399.1| hypothetical protein Haemo_10429 [Haemophilus [parainfluenzae] CCUG
13788]
gi|402304788|ref|ZP_10823852.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sputorum HK
2154]
gi|400377195|gb|EJP30075.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sputorum HK
2154]
Length = 231
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL--PDDLEWHFIGNLQSN 116
+ +R++AVSKTKPVS I + +AG + FGENYVQE VEK A DLEWHFIG LQSN
Sbjct: 24 ENVRLLAVSKTKPVSAIEEAIQAGQKAFGENYVQESVEKIAYFNQQTDLEWHFIGPLQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K K + A + +++VD KIA RL+ + PL VL+Q+N S E
Sbjct: 84 KTKLVAA---HFDWIQTVDRLKIAQRLSEQ-RPADKAPLNVLIQINISDE 129
>gi|262172425|ref|ZP_06040103.1| hypothetical protein VII_003254 [Vibrio mimicus MB-451]
gi|261893501|gb|EEY39487.1| hypothetical protein VII_003254 [Vibrio mimicus MB-451]
Length = 236
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|343519512|ref|ZP_08756492.1| pyridoxal phosphate enzyme, YggS family [Haemophilus pittmaniae HK
85]
gi|343392582|gb|EGV05147.1| pyridoxal phosphate enzyme, YggS family [Haemophilus pittmaniae HK
85]
Length = 234
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL + Q++ AAE+S R D IR++AVSKTKP I + Y+AG FGENYVQE V+K
Sbjct: 6 ALTHIKQQIQNAAEQSDRKIDEIRLLAVSKTKPNDAIFEAYQAGQLAFGENYVQEGVDKI 65
Query: 99 AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
LEWHFIG LQSNK + L+A + +++++ KIA RLN + PL
Sbjct: 66 RYFEAQNIQLEWHFIGPLQSNKTR-LVAE--HFDWMQTLERAKIADRLNEQ-RPQEKPPL 121
Query: 156 KVLVQVNTSGE 166
VL+Q+N S E
Sbjct: 122 NVLIQINISDE 132
>gi|289625048|ref|ZP_06458002.1| hypothetical protein PsyrpaN_07912 [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289647863|ref|ZP_06479206.1| hypothetical protein Psyrpa2_08942 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422580944|ref|ZP_16656088.1| hypothetical protein PSYAE_00805 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422680319|ref|ZP_16738591.1| hypothetical protein PSYTB_08206 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|330865795|gb|EGH00504.1| hypothetical protein PSYAE_00805 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|331009665|gb|EGH89721.1| hypothetical protein PSYTB_08206 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 228
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPAGDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|422594349|ref|ZP_16668640.1| hypothetical protein PLA107_06501 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330984657|gb|EGH82760.1| hypothetical protein PLA107_06501 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 228
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPAGDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|260581995|ref|ZP_05849790.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
NT127]
gi|260094885|gb|EEW78778.1| succinyl-diaminopimelate desuccinylase [Haemophilus influenzae
NT127]
Length = 237
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQIAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIAERLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|417846114|ref|ZP_12492127.1| UPF0001 protein [Haemophilus haemolyticus M21639]
gi|341953365|gb|EGT79873.1| UPF0001 protein [Haemophilus haemolyticus M21639]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + + R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIHQKIETACKEAKRNQNTVKLLAVSKTKPISSILSAYQAGQIAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|319896535|ref|YP_004134728.1| hypothetical protein HIBPF01320 [Haemophilus influenzae F3031]
gi|317432037|emb|CBY80385.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISEILSAYQAGQTAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + L+A ++++D KIA RLN T + PL
Sbjct: 67 YFESQNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|88801062|ref|ZP_01116610.1| hypothetical protein MED297_19052 [Reinekea blandensis MED297]
gi|88776201|gb|EAR07428.1| hypothetical protein MED297_19052 [Reinekea sp. MED297]
Length = 235
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++H A ++ RP + +VAVSKTKP + +R+ +EAG R FGENY QE+ EK
Sbjct: 10 LAQVNAKIHAACTKNDRPESEVTLVAVSKTKPAARVREAWEAGARHFGENYAQELAEKVQ 69
Query: 100 QLP-DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D +WHFIG LQSNK + L+A + V ++D KIA RL+ R PL VL
Sbjct: 70 ELKLDKAQWHFIGPLQSNKTR-LIA--EHADWVHTIDRLKIARRLSDQ-RPPDRAPLNVL 125
Query: 159 VQVNTSGE 166
+QVN S +
Sbjct: 126 IQVNISDD 133
>gi|406036692|ref|ZP_11044056.1| hypothetical protein AparD1_06957 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 228
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
+SV+ ++ A ER R P ++++AVSKT P +R++Y+AG R FGENY+QE + K +
Sbjct: 9 QSVLDQIQLACERVQRDPASVQLLAVSKTHPSQSLREMYQAGQRSFGENYLQEALTKIDE 68
Query: 101 LPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
L D ++EWHFIG++Q NK K L V VD IA RL+ RKPL + +
Sbjct: 69 LQDLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQ-RMDSRKPLNICI 124
Query: 160 QVNTSGEE 167
QVN G++
Sbjct: 125 QVNIDGQD 132
>gi|71737988|ref|YP_272771.1| hypothetical protein PSPPH_0468 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416019155|ref|ZP_11566048.1| hypothetical protein PsgB076_24359 [Pseudomonas syringae pv.
glycinea str. B076]
gi|416023998|ref|ZP_11568177.1| hypothetical protein PsgRace4_06068 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|71558541|gb|AAZ37752.1| conserved hypothetical protein TIGR00044 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320321983|gb|EFW78079.1| hypothetical protein PsgB076_24359 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330912|gb|EFW86886.1| hypothetical protein PsgRace4_06068 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 228
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPAGDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|298160419|gb|EFI01443.1| predicted pyridoxal phosphate-dependent enzyme [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 228
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPAGDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|397685438|ref|YP_006522757.1| alanine racemase domain-containing protein [Pseudomonas stutzeri
DSM 10701]
gi|395806994|gb|AFN76399.1| alanine racemase domain-containing protein [Pseudomonas stutzeri
DSM 10701]
Length = 236
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 77/127 (60%), Gaps = 9/127 (7%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R PD + ++AVSKT+P IR+ +AG FGENY+QE +EK A L
Sbjct: 11 VAARIREAAQAAGRDPDAVGLLAVSKTQPAGAIREANDAGLSDFGENYLQEALEKQASLA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D L WHFIG +QSNK + + + V SVD KIA RL+ R E PL V +
Sbjct: 71 DLALTWHFIGPIQSNKTRAI---AEHFDWVHSVDRLKIAQRLSEQRPAEL---PPLNVCL 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|398845489|ref|ZP_10602520.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM84]
gi|398253520|gb|EJN38646.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM84]
Length = 231
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L ++ +R+ AA R P I+++AVSKTKP S IR+++ AG R GENY+QE +
Sbjct: 5 ADNLSALAERIDSAARAVGRDPASIQLLAVSKTKPASAIREIHAAGVRDVGENYLQEALT 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK K + + V SVD KIA RL+ G PL
Sbjct: 65 KQGELRDLPLIWHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLPPL 120
Query: 156 KVLVQVNTSGEE 167
+ +QVN SGE+
Sbjct: 121 NICLQVNVSGED 132
>gi|422587883|ref|ZP_16662553.1| hypothetical protein PSYMP_05414 [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873946|gb|EGH08095.1| hypothetical protein PSYMP_05414 [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 228
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAKRDPASVGLLAVSKTKPAGDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKP 154
K +L D L WHFIG +QSNK + A N A V SVD KIA RL+ + E++ +P
Sbjct: 65 KQLELADLPLCWHFIGPIQSNKTR---AIAENFAWVHSVDRLKIAQRLSEQRPESL--EP 119
Query: 155 LKVLVQVNTSGE 166
L + VQVN SGE
Sbjct: 120 LNICVQVNVSGE 131
>gi|320155279|ref|YP_004187658.1| hypothetical protein VVMO6_00433 [Vibrio vulnificus MO6-24/O]
gi|319930591|gb|ADV85455.1| hypothetical protein YggS proline synthase co-transcribed bacterial
PROSC-like protein [Vibrio vulnificus MO6-24/O]
Length = 208
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 77/113 (68%), Gaps = 13/113 (11%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPD-DLEWHFIGNLQS 115
++++AVSKTKPV I + Y AG R FGENYVQE VEK A Q P+ +EWHFIG +QS
Sbjct: 1 MQLLAVSKTKPVEAILEAYHAGQRAFGENYVQEGVEKVRFFAEQHPEKSIEWHFIGPIQS 60
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGE 166
NK + L+A + A V ++D +KIA RLN R E PL+VL+QVNTSGE
Sbjct: 61 NKSR-LVA--EHFAWVHTIDRDKIAQRLNDQRPAEL---PPLQVLIQVNTSGE 107
>gi|188534959|ref|YP_001908756.1| hypothetical protein ETA_28390 [Erwinia tasmaniensis Et1/99]
gi|188030001|emb|CAO97885.1| Conserved hypothetical protein YggS [Erwinia tasmaniensis Et1/99]
Length = 237
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 78/129 (60%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V QR+ AA + R P I ++AVSKTKP S I + AG CFGENYVQE V+K
Sbjct: 8 LQQVQQRISAAAAQCGRCPQEITLLAVSKTKPASAIEEAVAAGQHCFGENYVQEGVDKIQ 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L + DL WHFIG LQSNK + L+A N +VD +IA RL++ PL VL
Sbjct: 68 LLANPDLVWHFIGPLQSNKSR-LVA--ENFDWCHTVDRLRIAERLSQQ-RPDPLPPLNVL 123
Query: 159 VQVNTSGEE 167
+Q+N S E+
Sbjct: 124 IQINISAEQ 132
>gi|84394065|ref|ZP_00992801.1| Predicted enzyme with a TIM-barrel fold [Vibrio splendidus 12B01]
gi|84375307|gb|EAP92218.1| Predicted enzyme with a TIM-barrel fold [Vibrio splendidus 12B01]
Length = 238
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R P+ ++++AVSKTKP+ I + G FGENYVQE V+K
Sbjct: 8 IEQITSQIRSAEQKCGRAPESVQLLAVSKTKPIDAILEAALGGQVAFGENYVQEGVDKVK 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +LEWHFIG +QSNK +P+ + V SV+ +KIA RL+ + P
Sbjct: 68 HFSEQHSNLNLEWHFIGPIQSNKTRPI---AESFQWVHSVERDKIAQRLSDQRPSE-LPP 123
Query: 155 LKVLVQVNTSGEE 167
L+VL+QVNTSGEE
Sbjct: 124 LQVLIQVNTSGEE 136
>gi|333898512|ref|YP_004472385.1| hypothetical protein Psefu_0307 [Pseudomonas fulva 12-X]
gi|333113777|gb|AEF20291.1| protein of unknown function UPF0001 [Pseudomonas fulva 12-X]
Length = 228
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ S R + ++AVSKTKP IR+ + AG R FGENY+QE ++K A L D
Sbjct: 14 RIREAAQASQRDFSSVGLLAVSKTKPADAIREAHAAGLRDFGENYLQEALDKQALLTDLP 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVN 162
L WHFIG +QSNK +P+ + A V SVD K+A RL+ R E PL + +QVN
Sbjct: 74 LTWHFIGPIQSNKTRPI---AEHFAWVHSVDRLKVAERLSAQRPAEL---APLNICLQVN 127
Query: 163 TSGE 166
SGE
Sbjct: 128 VSGE 131
>gi|254363058|ref|ZP_04979117.1| hypothetical protein MHA_2645 [Mannheimia haemolytica PHL213]
gi|452746043|ref|ZP_21945875.1| hypothetical protein F388_13452 [Mannheimia haemolytica serotype 6
str. H23]
gi|153094723|gb|EDN75513.1| hypothetical protein MHA_2645 [Mannheimia haemolytica PHL213]
gi|452086182|gb|EME02573.1| hypothetical protein F388_13452 [Mannheimia haemolytica serotype 6
str. H23]
Length = 225
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I+ EAG R FGENYVQE VEK + +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIQAAIEAGQRAFGENYVQEAVEKIEFFANRPELEWHFIGPLQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K K L+A +++VD KIA RLN + PL VL+Q+N S E
Sbjct: 84 KTK-LVAAY--FDWIQTVDRLKIAERLNEQ-RPADKAPLNVLIQINISDE 129
>gi|422402701|ref|ZP_16479761.1| hypothetical protein Pgy4_01140 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872136|gb|EGH06285.1| hypothetical protein Pgy4_01140 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 228
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPAGDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|330794212|ref|XP_003285174.1| hypothetical protein DICPUDRAFT_28875 [Dictyostelium purpureum]
gi|325084895|gb|EGC38313.1| hypothetical protein DICPUDRAFT_28875 [Dictyostelium purpureum]
Length = 247
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV-QEIVEKAA 99
+++ RV + + R + +VAVSKTKPV +IR +YE GHR FGENYV QE+++K+
Sbjct: 14 KNIKDRVEYVSNKFDRR--NVALVAVSKTKPVEMIRILYEKGHRHFGENYVIQELIQKSE 71
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM--VETMGRKPL 155
+L ++++WH+IG++QSNK+K LA V NL +VE+V+ +++ + + +E L
Sbjct: 72 ELASLNEIKWHYIGSIQSNKIKH-LASVKNLYVVETVEKKEVLDKFAKSWDLEKSNNTKL 130
Query: 156 KVLVQVNTSGEE 167
+++QVNTS EE
Sbjct: 131 NIMIQVNTSQEE 142
>gi|350543697|ref|ZP_08913398.1| Hypothetical protein YggS [Candidatus Burkholderia kirkii UZHbot1]
gi|350528541|emb|CCD35400.1| Hypothetical protein YggS [Candidatus Burkholderia kirkii UZHbot1]
Length = 231
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ +AA +SR ++++AVSKT P S +R +EAG R FGENYVQE + K
Sbjct: 7 LEEVRERIAKAAHDASRDASSVQLLAVSKTFPPSDVRAAFEAGQRAFGENYVQEGIAKIG 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+L D +++WHFIG LQSNK K A V S+D KIA RL+ G L
Sbjct: 67 ELADLRGEIQWHFIGPLQSNKTK---AVAEQFDWVHSIDRLKIAERLSAQ-RPEGTTALN 122
Query: 157 VLVQVNTSGE 166
V VQVN SGE
Sbjct: 123 VCVQVNVSGE 132
>gi|71281809|ref|YP_270331.1| hypothetical protein CPS_3663 [Colwellia psychrerythraea 34H]
gi|71147549|gb|AAZ28022.1| conserved hypothetical protein TIGR00044 [Colwellia psychrerythraea
34H]
Length = 239
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 16/141 (11%)
Query: 40 LRSVIQRVHQAAERS---------SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENY 90
L V ++ QA ++S S+ + ++AVSKTKP S++ Q Y AG FGENY
Sbjct: 8 LNKVKAQIQQACQQSGRLTPLAELSKQSSPVSLLAVSKTKPTSLVEQAYLAGQHDFGENY 67
Query: 91 VQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV- 147
+QE VEK A+L + ++ WHFIG +QSNK K + + N + V SVD EKIA RLN+ +
Sbjct: 68 LQEAVEKIAELANLPEIVWHFIGPIQSNKTKQIAS---NFSWVHSVDREKIALRLNQHLT 124
Query: 148 -ETMGRKPLKVLVQVNTSGEE 167
+ PL + +QVN S EE
Sbjct: 125 DDNCHDTPLNICLQVNISNEE 145
>gi|148265705|ref|YP_001232411.1| alanine racemase domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146399205|gb|ABQ27838.1| alanine racemase domain protein [Geobacter uraniireducens Rf4]
Length = 237
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 4/130 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L+ + +R+ AA ++ R P + +VAVSKT+ S + +G R FGENYVQE+V
Sbjct: 4 ADNLKFIHERIAAAALKAGRDPASVLLVAVSKTRDASAVDDAARSGQRLFGENYVQELVT 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KAAQ+ + + WHFIG LQSNKV+ +AG+ + M+ SVD +A ++R +G K
Sbjct: 64 KAAQVSESVAWHFIGGLQSNKVRQ-IAGL--VEMIHSVDRLSLAREIDRQWGRLG-KTCN 119
Query: 157 VLVQVNTSGE 166
VL+QVN + E
Sbjct: 120 VLIQVNIACE 129
>gi|300718247|ref|YP_003743050.1| hypothetical protein EbC_36720 [Erwinia billingiae Eb661]
gi|299064083|emb|CAX61203.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
Length = 235
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V +R+ AA + R P I ++AVSKTKP S + + AG RCFGENYVQE V+K
Sbjct: 8 LQQVRERISAAAAKCGRDPAEITLLAVSKTKPQSAVEEAIAAGQRCFGENYVQEGVDKIL 67
Query: 100 QLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L + LEWHFIG LQSNK + L+A N +VD KIA RLN L VL
Sbjct: 68 ALGNSALEWHFIGPLQSNKSR-LVA--ENFDWCHTVDRLKIATRLNEQ-RPADLPSLNVL 123
Query: 159 VQVNTSGE 166
+Q+N S E
Sbjct: 124 IQINISDE 131
>gi|229525152|ref|ZP_04414557.1| hypothetical protein VCA_002763 [Vibrio cholerae bv. albensis
VL426]
gi|229338733|gb|EEO03750.1| hypothetical protein VCA_002763 [Vibrio cholerae bv. albensis
VL426]
Length = 236
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ + A ++ R ++++AVSKTKPV I + +AG RCFGENYVQE V+K
Sbjct: 11 ITAHIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|422908998|ref|ZP_16943650.1| hypothetical protein VCHE09_0476 [Vibrio cholerae HE-09]
gi|341636080|gb|EGS60783.1| hypothetical protein VCHE09_0476 [Vibrio cholerae HE-09]
Length = 236
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I +AG RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSTVQLLAVSKTKPVEAILDATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|373953581|ref|ZP_09613541.1| protein of unknown function UPF0001 [Mucilaginibacter paludis DSM
18603]
gi|373890181|gb|EHQ26078.1| protein of unknown function UPF0001 [Mucilaginibacter paludis DSM
18603]
Length = 229
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 75/108 (69%), Gaps = 4/108 (3%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+ ++VAVSKTKP +++ Y+AG R FGEN VQE+VEK +LP D++WH IG+LQ+NKVK
Sbjct: 18 KAKLVAVSKTKPAEDLQEAYDAGQRIFGENMVQELVEKYEKLPKDIQWHLIGHLQTNKVK 77
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+ P ++++ESVD+ K+ +N+ E ++ + L+QV + EE
Sbjct: 78 YI---APFISLIESVDSLKLLQEINKQAEK-NKRVIDCLLQVYIADEE 121
>gi|352104801|ref|ZP_08960554.1| hypothetical protein HAL1_14727 [Halomonas sp. HAL1]
gi|350598723|gb|EHA14833.1| hypothetical protein HAL1_14727 [Halomonas sp. HAL1]
Length = 238
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-- 102
+R+ A E + R + +++AVSKTKP ++IRQV++ G R FGENY+QE +EK +L
Sbjct: 19 ERLRNALEAAGRAQNAAKLLAVSKTKPAAMIRQVWQLGQREFGENYLQEALEKQTELADL 78
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
DD+ WHFIG LQSNK + A + V SVD KIA RL+ T PL + +QVN
Sbjct: 79 DDIVWHFIGPLQSNKTR---AVAEHFDWVHSVDRLKIAKRLSEQRPTH-LAPLNICLQVN 134
Query: 163 TSGEE 167
S EE
Sbjct: 135 ISREE 139
>gi|262164087|ref|ZP_06031826.1| hypothetical protein VMA_000528 [Vibrio mimicus VM223]
gi|262027615|gb|EEY46281.1| hypothetical protein VMA_000528 [Vibrio mimicus VM223]
Length = 236
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V +++ EKIA RLN PL+V
Sbjct: 71 EHHPQFALEWHFIGPLQSNKTR-LVA--EHFDWVHTIEREKIAVRLNEQ-RPADMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|451996850|gb|EMD89316.1| hypothetical protein COCHEDRAFT_1196219 [Cochliobolus
heterostrophus C5]
Length = 269
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 12/136 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC---FGENYVQEIVE 96
+ S+ R++ AA + ++P +R++AVSK KP + I +++ + FGENYVQE++E
Sbjct: 19 IASITARIN-AASKGTKP---VRLIAVSKLKPANDILALHQPPNPLQTHFGENYVQELLE 74
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-- 154
KA LP + WH IG LQSNK K L +PNL V SVD EK A L + + + K
Sbjct: 75 KAKLLPRSIHWHMIGGLQSNKCKQLAEQIPNLWCVSSVDTEKKANELEKGRKALLEKDSS 134
Query: 155 ---LKVLVQVNTSGEE 167
L+V+VQVNTSGE+
Sbjct: 135 ASKLRVMVQVNTSGED 150
>gi|341900390|gb|EGT56325.1| hypothetical protein CAEBREN_14457 [Caenorhabditis brenneri]
Length = 244
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++++ V A SS R R+VAVSKTKP +I Y G R FGENYVQE+ EK+A
Sbjct: 10 LLNILEAVADAV-TSSPASKRCRLVAVSKTKPAELIEACYSKGQRHFGENYVQELEEKSA 68
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK--P 154
L ++ WHFIG +QSNK+ + + P L VE+V++EK A ++ G P
Sbjct: 69 SLATKCPEIRWHFIGQVQSNKIGKICSS-PGLWCVETVESEKHAKLFDKEWAKHGATVLP 127
Query: 155 LKVLVQVNTSGEE 167
L+VLVQVNTS EE
Sbjct: 128 LRVLVQVNTSEEE 140
>gi|341895789|gb|EGT51724.1| hypothetical protein CAEBREN_12934 [Caenorhabditis brenneri]
Length = 244
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++++ V A SS R R+VAVSKTKP +I Y G R FGENYVQE+ EK+A
Sbjct: 10 LLNILEAVADAV-TSSPATKRCRLVAVSKTKPAELIEACYSKGQRHFGENYVQELEEKSA 68
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK--P 154
L ++ WHFIG +QSNK+ + + P L VE+V++EK A ++ G P
Sbjct: 69 SLATKCPEIRWHFIGQVQSNKIGKICSS-PGLWCVETVESEKHAKLFDKEWAKHGATVLP 127
Query: 155 LKVLVQVNTSGEE 167
L+VLVQVNTS EE
Sbjct: 128 LRVLVQVNTSEEE 140
>gi|258620724|ref|ZP_05715759.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|424810419|ref|ZP_18235771.1| hypothetical protein SX4_1006 [Vibrio mimicus SX-4]
gi|258586922|gb|EEW11636.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|342322350|gb|EGU18141.1| hypothetical protein SX4_1006 [Vibrio mimicus SX-4]
Length = 236
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V +++ EKIA RLN PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIEREKIALRLNEQ-RPADMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|359787333|ref|ZP_09290391.1| hypothetical protein MOY_15220 [Halomonas sp. GFAJ-1]
gi|359295462|gb|EHK59731.1| hypothetical protein MOY_15220 [Halomonas sp. GFAJ-1]
Length = 231
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 8/138 (5%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
TD +L + +R+H+A + + R + ++AVSKTKP S+IRQ ++ G R FGENY+
Sbjct: 2 TDIALPESLATARERLHRALKNADRLLNSAALLAVSKTKPASLIRQAWQLGQREFGENYL 61
Query: 92 QEIVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVE 148
QE +EK A+L DD+ WHFIG LQSNK + + N A + SV+ KIA RL+ + E
Sbjct: 62 QEALEKQAELADLDDIVWHFIGPLQSNKTRSV---AENFAWMHSVERLKIAKRLSEQRPE 118
Query: 149 TMGRKPLKVLVQVNTSGE 166
+ PL + +QVN S E
Sbjct: 119 HLA--PLNICLQVNISRE 134
>gi|197334451|ref|YP_002155186.1| pyridoxal phosphate enzyme, YggS family [Vibrio fischeri MJ11]
gi|197315941|gb|ACH65388.1| pyridoxal phosphate enzyme, YggS family [Vibrio fischeri MJ11]
Length = 236
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 11/134 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
+ + ++ + ++ R PD ++++AVSKTKP+ ++ Q EAG FGENYVQE +EK
Sbjct: 8 INQITHQIENSIQKCGRNPDSVQLLAVSKTKPIELLEQAIEAGQCIFGENYVQEGIEKVQ 67
Query: 99 ---AQLP-DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET-MGRK 153
Q P LEWHFIG +QSNK +P+ + V SV+ KIA RLN + +G
Sbjct: 68 YFQKQHPTTSLEWHFIGPIQSNKTRPI---AEHFDWVHSVERLKIAQRLNEQRPSELGE- 123
Query: 154 PLKVLVQVNTSGEE 167
L VL+QVNTS EE
Sbjct: 124 -LNVLIQVNTSSEE 136
>gi|153004231|ref|YP_001378556.1| alanine racemase domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152027804|gb|ABS25572.1| alanine racemase domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 213
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQS 115
P + +VAVSKT+P + IR+ YEAG R FGENY QE EKA L D +L WHFIG LQ+
Sbjct: 15 PAGVTLVAVSKTQPAAAIREAYEAGQRDFGENYAQEWREKADALADLPELRWHFIGALQT 74
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
NKVK LAG +A V +VD E++A L+R G +V V+VNT GE
Sbjct: 75 NKVK-YLAG--RVAYVHTVDREELARELSRRFAQKG-AVARVFVEVNTGGE 121
>gi|378725803|gb|EHY52262.1| YggS family pyridoxal phosphate enzyme [Exophiala dermatitidis
NIH/UT8656]
Length = 322
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 92/179 (51%), Gaps = 26/179 (14%)
Query: 15 NHINEQVEAETMAASAATDGVAATALRSVIQRVHQAAERSSRPPDR-------------I 61
N+ + E E + A V T L+SV QR+ SS +
Sbjct: 10 NNTTDSKETEMIKPDPARTAVLLTNLQSVKQRISAVLASSSSSSSSSSPSSQPPPPTRVV 69
Query: 62 RIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
R+VAVSK KP S I ++ A H FGENYVQE++EKA LP ++WHFIG LQSNK +
Sbjct: 70 RLVAVSKLKPASDILALHNAPVNHLHFGENYVQELLEKARILPKTIKWHFIGGLQSNKAR 129
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK---------PLKVLVQVNTSGEE 167
L V L VESVD+ K A L+ R + G K PL+V +QVNTSGEE
Sbjct: 130 ELAREVEGLWAVESVDSVKKASLLDKGRAERSEGDKTTSSSADSDPLRVFIQVNTSGEE 188
>gi|410614057|ref|ZP_11325108.1| hypothetical protein GPSY_3386 [Glaciecola psychrophila 170]
gi|410166328|dbj|GAC38997.1| hypothetical protein GPSY_3386 [Glaciecola psychrophila 170]
Length = 227
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+SV + Q+ + RP + ++++AVSKTKPVS I YEAG R FGENYVQE VEK
Sbjct: 8 LKSVQITIEQSTLDAHRPSNTVKLLAVSKTKPVSDIVLAYEAGQRLFGENYVQEGVEKIK 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L DD+EW+FIG LQSNK + L+A + V+++D KIA RLN + K L +
Sbjct: 68 ALESLDDIEWYFIGPLQSNKTR-LVA--EHFDWVQAIDRLKIAQRLNDQIAP--PKILNL 122
Query: 158 LVQVNTSGE 166
+QVN +
Sbjct: 123 CIQVNIDDD 131
>gi|380016258|ref|XP_003692104.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Apis florea]
Length = 248
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 15/117 (12%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA-----AQLPDDLEWHFIGNLQSN 116
R+VAVSK KPV +I Y AG R FGENYV E++EK ++ WHFIG+LQ N
Sbjct: 32 RLVAVSKLKPVELIVDAYNAGQRHFGENYVNELLEKGNDPIILDTCKNIHWHFIGHLQRN 91
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLN------RMVETMGRKPLKVLVQVNTSGEE 167
KV LL+ VPNL ++E++DNEK+A +N R E + LKV+VQVNTS E+
Sbjct: 92 KVNKLLS-VPNLYVIETIDNEKLASAVNTSWINYRKDENL---KLKVMVQVNTSKEQ 144
>gi|242281265|ref|YP_002993394.1| alanine racemase [Desulfovibrio salexigens DSM 2638]
gi|242124159|gb|ACS81855.1| alanine racemase domain protein [Desulfovibrio salexigens DSM 2638]
Length = 234
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V + V QA R+ R P+ + ++AVSK S I +Y AGHRCFGE+YVQE + K
Sbjct: 12 ISEVKEEVAQACLRAGRKPEEVTVMAVSKLHAASDIEILYNAGHRCFGESYVQEALAKQE 71
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D++WHFIG LQS K K +AG + V SVD+ K+AG LN+ E + +L
Sbjct: 72 ELSGLDIDWHFIGGLQSKKAKQ-VAG--KFSAVHSVDSSKLAGLLNKKAEALDVVQ-NIL 127
Query: 159 VQVNTSGE 166
+QVNT+ E
Sbjct: 128 IQVNTACE 135
>gi|295675574|ref|YP_003604098.1| alanine racemase [Burkholderia sp. CCGE1002]
gi|295435417|gb|ADG14587.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
Length = 240
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ +AA+ + R + ++AVSKT P +R + AG R FGENYVQE ++K
Sbjct: 16 LADVHERIAKAAQAAGRDAQSVMLLAVSKTFPADAVRDAHAAGQRAFGENYVQEALDKIQ 75
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D LEWHFIG LQSNK +P+ + V SVD KIA RL+ PL
Sbjct: 76 TLADLRASLEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQ-RPDNLPPLN 131
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 132 VCLQVNVSGE 141
>gi|198414039|ref|XP_002124883.1| PREDICTED: similar to Proline synthetase co-transcribed bacterial
homolog protein [Ciona intestinalis]
Length = 250
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 13/135 (9%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T + S +Q+ Q P + +VAVSKTKP+S+I+Q Y+AG R FGENY++E+V K
Sbjct: 17 TGIDSAVQKRPQTV-----PTVQPILVAVSKTKPLSLIKQAYDAGQRHFGENYLKELVVK 71
Query: 98 A-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
+ A+L D++WH+IG Q K+ +L V NL M+E+++ K A +N ++
Sbjct: 72 SNSPDMAELCPDIKWHYIGTFQ-KKMASVLMRVSNLHMLETLNGAKEADAVNSRWKS--T 128
Query: 153 KPLKVLVQVNTSGEE 167
+PL+VLVQVNTSGEE
Sbjct: 129 EPLQVLVQVNTSGEE 143
>gi|350563513|ref|ZP_08932334.1| alanine racemase domain protein [Thioalkalimicrobium aerophilum
AL3]
gi|349778648|gb|EGZ32999.1| alanine racemase domain protein [Thioalkalimicrobium aerophilum
AL3]
Length = 231
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R++QA +++R P+ + ++AVSKT+P + + G R FGENY+Q+ + K A P
Sbjct: 13 VKHRINQACLQANRDPNDVSLLAVSKTQPAAAVAAFIALGQRAFGENYLQDALPKIAVHP 72
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D WHFIG +QSNK KP+ + VESVD KIA RL+ T R PL +L+QVN
Sbjct: 73 -DATWHFIGPIQSNKTKPI---AEHFDWVESVDRLKIAQRLSAQRPT-DRAPLNILLQVN 127
Query: 163 TSGEEYGECFIKC 175
S EE F+
Sbjct: 128 ISQEESKSGFLPA 140
>gi|449146500|ref|ZP_21777273.1| hypothetical protein D908_17064 [Vibrio mimicus CAIM 602]
gi|449077732|gb|EMB48693.1| hypothetical protein D908_17064 [Vibrio mimicus CAIM 602]
Length = 236
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSAVQLLAVSKTKPVEAILEATQAGQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V +++ EKIA RLN PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIEREKIALRLNEQ-RPADMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|225849671|ref|YP_002729905.1| pyridoxal phosphate enzyme, YggS family [Persephonella marina
EX-H1]
gi|225646566|gb|ACO04752.1| pyridoxal phosphate enzyme, YggS family [Persephonella marina
EX-H1]
Length = 228
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Query: 47 VHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--D 104
++++AERS R P+ I ++A SKT+PV I++ YEAG R FGEN VQE ++K QL + D
Sbjct: 14 IYRSAERSGRDPEEIILLAASKTQPVEKIKEAYEAGVRYFGENRVQEGIKKIEQLKEIRD 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
+ WH IG LQ+NK K V ++ S+D E +A L++ +G+K VL++VN
Sbjct: 74 IHWHLIGGLQTNKAK---YAVRYFELIHSLDRESLADELDKRARKIGKKQ-DVLIEVNIG 129
Query: 165 GEE--YG 169
EE YG
Sbjct: 130 EEETKYG 136
>gi|386390335|ref|ZP_10075126.1| pyridoxal phosphate enzyme, YggS family [Haemophilus
paraphrohaemolyticus HK411]
gi|385693370|gb|EIG24019.1| pyridoxal phosphate enzyme, YggS family [Haemophilus
paraphrohaemolyticus HK411]
Length = 229
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 44 IQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL 101
+ R+HQ E+ SR R +R++AVSKTKPV I + +AG R FGENYVQE VEK
Sbjct: 7 LSRIHQQIEQISRQYQRENVRLLAVSKTKPVQAIEEAIKAGQRAFGENYVQEGVEKITYF 66
Query: 102 PDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
++ +EWHFIG LQSNK + L+A N +++VD KIA RLN PL VL+
Sbjct: 67 AENKAIEWHFIGPLQSNKSR-LVA--ENFDWIQTVDRLKIAERLNDQ-RPEHLPPLNVLI 122
Query: 160 QVNTSGE 166
Q+N S E
Sbjct: 123 QINISDE 129
>gi|157374371|ref|YP_001472971.1| alanine racemase [Shewanella sediminis HAW-EB3]
gi|157316745|gb|ABV35843.1| alanine racemase domain protein [Shewanella sediminis HAW-EB3]
Length = 234
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA+ SSR D I+++AVSKTKP++ I Y AG R FGENYVQE K +L
Sbjct: 14 RITQAAKFSSRNADEIQLLAVSKTKPITDIIAAYAAGQRLFGENYVQEGESKVNELKSIC 73
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
+++WHFIG LQSNK K ++AG+ + ++ +KIA RLN KPL + +QVN
Sbjct: 74 PEIQWHFIGPLQSNKTK-VVAGL--FDWMHTLCRDKIAVRLNDQ-RPDALKPLNICIQVN 129
Query: 163 TSGE 166
SGE
Sbjct: 130 ISGE 133
>gi|422618974|ref|ZP_16687668.1| hypothetical protein PSYJA_18016 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330899348|gb|EGH30767.1| hypothetical protein PSYJA_18016 [Pseudomonas syringae pv. japonica
str. M301072]
Length = 228
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPTSVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|334366122|ref|ZP_08515066.1| pyridoxal phosphate enzyme, YggS family [Alistipes sp. HGB5]
gi|390948441|ref|YP_006412201.1| hypothetical protein Alfi_3288 [Alistipes finegoldii DSM 17242]
gi|313157824|gb|EFR57235.1| pyridoxal phosphate enzyme, YggS family [Alistipes sp. HGB5]
gi|390425010|gb|AFL79516.1| putative enzyme with a TIM-barrel fold [Alistipes finegoldii DSM
17242]
Length = 221
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 78/115 (67%), Gaps = 5/115 (4%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
RS+ P D + +VAVSKT PV IR+ Y+AGHR FGE+ QE+ EK LP D+EWH IG+
Sbjct: 11 RSTLPED-VTLVAVSKTHPVEAIREAYDAGHRVFGESRPQELREKYEALPQDIEWHMIGH 69
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
LQ+NK+K + P ++++ SVD+ ++A + R GR +++L++++ + EE
Sbjct: 70 LQTNKIKYI---APFVSLIHSVDSARLAEAIQREAAKCGRT-IEILLEIHVADEE 120
>gi|392537922|ref|ZP_10285059.1| PLP-binding domain-containing protein [Pseudoalteromonas marina
mano4]
Length = 237
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 76/125 (60%), Gaps = 8/125 (6%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL--PD 103
R+ AA+ + R D I ++AVSKTKP I Y G R FGE+YVQE V+K AQL
Sbjct: 23 RISNAAKNTHRSKDEITLLAVSKTKPSDDIVAAYNYGQRQFGESYVQEAVDKIAQLHTYS 82
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LKVLVQVN 162
D+ WHFIG +QSNK L+A N V+SVD KIA RLN T KP L VL+QVN
Sbjct: 83 DIIWHFIGPIQSNK-SALVA--ENFDWVQSVDRIKIAKRLNAQRPT--SKPLLNVLIQVN 137
Query: 163 TSGEE 167
S EE
Sbjct: 138 ISAEE 142
>gi|390951568|ref|YP_006415327.1| pyridoxal phosphate enzyme, YggS family [Thiocystis violascens DSM
198]
gi|390428137|gb|AFL75202.1| pyridoxal phosphate enzyme, YggS family [Thiocystis violascens DSM
198]
Length = 231
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V R+ A R+ RPP+++ ++AVSK + IR Y+ G R FGE+YVQE ++K A
Sbjct: 10 LQQVRARIQAACARAGRPPEQVALIAVSKKQSADAIRAAYQLGQRAFGESYVQEALDKMA 69
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
QL D D+EWHFIG +Q+NK + + + V S+ + A RLN PLKV
Sbjct: 70 QLTDLDIEWHFIGRVQANKTRQI---ATHFDWVHSLADPAHARRLNAQ-RPADAPPLKVC 125
Query: 159 VQVNTSGEEYGE 170
++VN SGE E
Sbjct: 126 LEVNLSGESSKE 137
>gi|422674908|ref|ZP_16734257.1| hypothetical protein PSYAR_19276 [Pseudomonas syringae pv. aceris
str. M302273]
gi|330972631|gb|EGH72697.1| hypothetical protein PSYAR_19276 [Pseudomonas syringae pv. aceris
str. M302273]
Length = 228
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYNAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|295109994|emb|CBL23947.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus obeum A2-162]
Length = 230
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 86/139 (61%), Gaps = 16/139 (11%)
Query: 35 VAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
+ A L V + + A + + R P + +++VSKTKPVS++++ Y+AG R FGEN VQEI
Sbjct: 1 MVAENLEQVRKNIELACKEAGRDPKEVTLISVSKTKPVSMLQEAYDAGSRDFGENKVQEI 60
Query: 95 VEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
++K QLP D+ WH IG+LQ NKVK + V +A++ SVD+ ++A ET+ +
Sbjct: 61 MDKVPQLPSDIRWHMIGHLQRNKVKYI---VDKVALIHSVDSLRLA-------ETIEHEA 110
Query: 155 LK------VLVQVNTSGEE 167
K VL++VN + EE
Sbjct: 111 AKHSVTVPVLIEVNVAQEE 129
>gi|300773394|ref|ZP_07083263.1| YggS family pyridoxal phosphate enzyme [Sphingobacterium
spiritivorum ATCC 33861]
gi|300759565|gb|EFK56392.1| YggS family pyridoxal phosphate enzyme [Sphingobacterium
spiritivorum ATCC 33861]
Length = 229
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ +VAVSKTKP I Q YEAG R FGEN VQE+VEK QLP D+EWH IG+LQ+NKVK
Sbjct: 19 VTLVAVSKTKPNEDILQAYEAGQRVFGENMVQELVEKQEQLPKDIEWHLIGHLQTNKVKY 78
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNR 145
+ P + M+ESVD+ K+ +N+
Sbjct: 79 I---APFIHMIESVDSIKLLKEINK 100
>gi|383851703|ref|XP_003701371.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Megachile rotundata]
Length = 248
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 75/114 (65%), Gaps = 11/114 (9%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLE------WHFIGNLQSN 116
+VAVSK KP +I + YEAG R FGENYV E+VEK P+ LE WHFIG+LQ N
Sbjct: 33 LVAVSKLKPPELIIKAYEAGQRHFGENYVNELVEKGNH-PNILEKCAQIRWHFIGHLQRN 91
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR---KPLKVLVQVNTSGEE 167
KV +L+ +PNL ++E+VDNEK+A L+ + LKV+VQVNTS EE
Sbjct: 92 KVNKVLS-IPNLHIIETVDNEKLASALHNSWPKFRKHDDSKLKVMVQVNTSKEE 144
>gi|45187572|ref|NP_983795.1| ADL301Cp [Ashbya gossypii ATCC 10895]
gi|44982310|gb|AAS51619.1| ADL301Cp [Ashbya gossypii ATCC 10895]
Length = 268
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKAAQL 101
V +RV ++ E R + ++AVSK KP S + +YE G R FGENYVQE+V KAA+L
Sbjct: 39 VDERVSRSMEECGRRRSEVLLLAVSKLKPASDVAILYEEMGLRHFGENYVQELVGKAAEL 98
Query: 102 PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL--V 159
P D++WHFIG LQSNK K LA V NL VE++D+ K A +L +L +
Sbjct: 99 PGDIQWHFIGALQSNKCKD-LAKVVNLHAVETIDSLKKARKLEEARAKFQPDAPAILCSI 157
Query: 160 QVNTSGE 166
+VNTSGE
Sbjct: 158 EVNTSGE 164
>gi|336314734|ref|ZP_08569650.1| pyridoxal phosphate enzyme, YggS family [Rheinheimera sp. A13L]
gi|335881033|gb|EGM78916.1| pyridoxal phosphate enzyme, YggS family [Rheinheimera sp. A13L]
Length = 230
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 14/112 (12%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEWHFIGNLQSNKVK 119
R++AVSKTKP S + Y+A R FGENYVQE+V KA +L + +EWHFIG +QSNK K
Sbjct: 30 RLIAVSKTKPASSVAAAYQADQRAFGENYVQELVSKATELNSLEGIEWHFIGPIQSNKTK 89
Query: 120 PLLAGVPNLAM----VESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
++A+ V S+D KIA RL+ + + PL+VL+QVN SGEE
Sbjct: 90 -------DIALYADWVHSIDRLKIAERLSAQ-RPLDKTPLQVLLQVNISGEE 133
>gi|121714355|ref|XP_001274788.1| alanine racemase family protein, putative [Aspergillus clavatus
NRRL 1]
gi|119402942|gb|EAW13362.1| alanine racemase family protein, putative [Aspergillus clavatus
NRRL 1]
Length = 266
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDR-IRIVAVSKTKPVSVIRQVYE--AG 82
M AS + + L SV R+ AA + R P +R+VAVSK K + I ++
Sbjct: 1 MPASPSRTATLLSNLSSVTSRITTAASTAHRAPTHPVRLVAVSKLKTAADILALHNPPTN 60
Query: 83 HRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGR 142
H FGENY+QE+ EK+ LP + WHFIG LQSNK L V L VESVD+EK A
Sbjct: 61 HSHFGENYLQELTEKSKLLPPTIRWHFIGGLQSNKCVALARDVRGLWAVESVDSEKKASL 120
Query: 143 LNR--------MVETMGRKPLKVLVQVNTSGEE 167
L++ + T L+V VQVNTSGEE
Sbjct: 121 LDKGWGERAAEVRATDADDRLRVFVQVNTSGEE 153
>gi|317480381|ref|ZP_07939481.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 4_1_36]
gi|316903459|gb|EFV25313.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 4_1_36]
Length = 221
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P+++R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPEKVRLVAVSKFHPNEAIEEAYRAGQRVFGESKVQEMTAKCESLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP +A++ +D+ K+ +++ G K + L+Q++ + EE +G F
Sbjct: 71 TNKIKYI---VPYVALIHGIDSYKLLAEVDKQAAKAG-KTVNCLLQLHIAREETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 DEC 129
>gi|440759970|ref|ZP_20939088.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC [Pantoea agglomerans 299R]
gi|436426308|gb|ELP24027.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC [Pantoea agglomerans 299R]
Length = 235
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V QR+ AA + R P+ I ++AVSKTKP S + + + AG FGENYVQE VEK
Sbjct: 8 LQQVRQRIAAAAAQCGRAPEEITLLAVSKTKPASAVEEAFAAGQIGFGENYVQEGVEKVQ 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L +LEWHFIG LQSNK + L+A N A ++D ++IA RL+ PL V
Sbjct: 68 ALAAHPELEWHFIGPLQSNKSR-LVA--ENFAWCHTIDRQRIAQRLSDQ-RPASLPPLNV 123
Query: 158 LVQVNTSGE 166
L+QVN S E
Sbjct: 124 LIQVNISDE 132
>gi|239623979|ref|ZP_04667010.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522010|gb|EEQ61876.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 226
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 82/137 (59%), Gaps = 10/137 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ QA RS R P + ++AVSKTKPV ++ + Y AG R FGEN VQEIV K
Sbjct: 6 LIEVNRRIEQACIRSGRDPKAVTLIAVSKTKPVPMLEEAYAAGARDFGENKVQEIVAKKP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP---LK 156
+LP+D+ WH IG+LQ NKV +L ++ SVD+ RL + +ET K +
Sbjct: 66 ELPEDIRWHMIGHLQRNKVSQVLG---KAVLIHSVDSL----RLAQQIETDAAKAGLDVD 118
Query: 157 VLVQVNTSGEEYGECFI 173
+L++VN + EE F+
Sbjct: 119 ILLEVNVAREESKYGFM 135
>gi|424065659|ref|ZP_17803133.1| hypothetical protein Pav013_0349 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408003123|gb|EKG43334.1| hypothetical protein Pav013_0349 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 228
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|189423531|ref|YP_001950708.1| alanine racemase domain-containing protein [Geobacter lovleyi SZ]
gi|189419790|gb|ACD94188.1| alanine racemase domain protein [Geobacter lovleyi SZ]
Length = 228
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V R+ +A S R P +R+VAVSK P +++ + AG FGENYVQE+V+KAA
Sbjct: 7 LAAVQARIQRACTISGRAPSTVRLVAVSKLHPAALVAEAAAAGQTVFGENYVQELVDKAA 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
QL +EWH IG+LQSNKVK L G+ ++M+ +VD +A ++R +LV
Sbjct: 67 QLARPVEWHMIGHLQSNKVK-YLPGI--VSMIHTVDRLSLAQEIDRQWRDKQSAACDILV 123
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 124 QVNVSGE 130
>gi|332535496|ref|ZP_08411274.1| hypothetical protein PH505_cw00020 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035073|gb|EGI71589.1| hypothetical protein PH505_cw00020 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 237
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ AA+ + R + + ++AVSKTKP I YE G R FGE+YVQE ++K A
Sbjct: 17 LTSAYARIADAAKNTQRNTNEVTLLAVSKTKPSEDIIAAYEHGQREFGESYVQEAIDKIA 76
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
QL D+ WHFIG +QSNK L+A N V+SVD KIA RL+ + PL +
Sbjct: 77 QLQSYSDIIWHFIGPIQSNK-SALVAA--NFDWVQSVDRIKIAKRLDSQ-RPDDKPPLNI 132
Query: 158 LVQVNTSGEE 167
L+QVN S EE
Sbjct: 133 LIQVNISNEE 142
>gi|390435322|ref|ZP_10223860.1| hypothetical protein PaggI_10837 [Pantoea agglomerans IG1]
Length = 235
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 78/129 (60%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V QR+ AA R P+ I ++AVSKTKP S + + + AG FGENYVQE VEK
Sbjct: 8 LQQVRQRIAAAAASCGRAPEEITLLAVSKTKPASAVEEAFAAGQIAFGENYVQEGVEKVQ 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L +LEWHFIG LQSNK + L+A + A ++D ++IA RLN PL V
Sbjct: 68 ALAAHPELEWHFIGPLQSNKSR-LVA--EHFAWCHTIDRQRIAQRLNDQ-RPASLPPLNV 123
Query: 158 LVQVNTSGE 166
L+QVN S E
Sbjct: 124 LIQVNISDE 132
>gi|304396759|ref|ZP_07378639.1| alanine racemase domain protein [Pantoea sp. aB]
gi|304355555|gb|EFM19922.1| alanine racemase domain protein [Pantoea sp. aB]
Length = 235
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 79/129 (61%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V QR+ AA + R P+ I ++AVSKTKP S + + + AG FGENYVQE VEK
Sbjct: 8 LQQVRQRIAAAAAQCGRAPEEITLLAVSKTKPASAVEEAFAAGQIGFGENYVQEGVEKVQ 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L +LEWHFIG LQSNK + L+A N A ++D ++IA RL+ PL V
Sbjct: 68 ALAAHPELEWHFIGPLQSNKSR-LVA--ENFAWCHTIDRQRIAQRLSDQ-RPASLPPLNV 123
Query: 158 LVQVNTSGE 166
L+QVN S E
Sbjct: 124 LIQVNISDE 132
>gi|451847774|gb|EMD61081.1| hypothetical protein COCSADRAFT_174404 [Cochliobolus sativus
ND90Pr]
Length = 269
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 79/126 (62%), Gaps = 11/126 (8%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC---FGENYVQEIVEKAAQLPDDLE 106
AA + ++P +R++AVSK KP + I +++ + FGENYVQE++EKA LP +
Sbjct: 28 AASKGTKP---VRLIAVSKLKPANDILALHQPPNPLQTHFGENYVQELLEKAKLLPRSIH 84
Query: 107 WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR----MVETMGR-KPLKVLVQV 161
WH IG LQSNK K L +PNL V SVD EK A L + ++E G L+V+VQV
Sbjct: 85 WHMIGGLQSNKCKQLAEQIPNLWCVSSVDTEKKANELEKGRKALLEKDGSASKLRVMVQV 144
Query: 162 NTSGEE 167
NTSGE+
Sbjct: 145 NTSGED 150
>gi|269137633|ref|YP_003294333.1| hypothetical protein ETAE_0275 [Edwardsiella tarda EIB202]
gi|387866385|ref|YP_005697854.1| hypothetical protein ETAF_0238 [Edwardsiella tarda FL6-60]
gi|267983293|gb|ACY83122.1| hypothetical protein ETAE_0275 [Edwardsiella tarda EIB202]
gi|304557698|gb|ADM40362.1| hypothetical protein ETAF_0238 [Edwardsiella tarda FL6-60]
Length = 236
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V Q + +AAE+ R P I ++AVSKTKP+ I AG R FGENYVQE V K
Sbjct: 9 LDAVRQHLVRAAEQCGRDPRDITLLAVSKTKPIEDIDAAIAAGQRAFGENYVQEGVSKIQ 68
Query: 100 ---QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGR 152
Q P D LEWHFIG LQSNK +P+ + + +VD KIA RLN R E
Sbjct: 69 HYRQQPQGDALEWHFIGPLQSNKSRPV---AEHFDWIHTVDRVKIAQRLNEQRPAEL--- 122
Query: 153 KPLKVLVQVNTSGEE 167
+PL VL+QVN S E+
Sbjct: 123 EPLNVLIQVNISDEQ 137
>gi|345871352|ref|ZP_08823298.1| protein of unknown function UPF0001 [Thiorhodococcus drewsii AZ1]
gi|343920515|gb|EGV31246.1| protein of unknown function UPF0001 [Thiorhodococcus drewsii AZ1]
Length = 231
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T L V R+ A ER+ R PD + ++AVSK +P IR Y AG R FGE+Y+QE ++K
Sbjct: 8 TRLGQVQDRLRAACERAGRAPDSVALIAVSKKQPAEAIRAAYRAGQRVFGESYLQEALDK 67
Query: 98 AAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKP 154
+L D D+EWHFIG +QSNK + + + + V + + A RLN R E P
Sbjct: 68 ITELSDLDIEWHFIGRIQSNKTRQIAS---HFDWVHGLSDPDHARRLNDQRPPEA---PP 121
Query: 155 LKVLVQVNTSGEE 167
L V +Q+N SGE+
Sbjct: 122 LDVCLQINLSGED 134
>gi|417841526|ref|ZP_12487630.1| UPF0001 protein [Haemophilus haemolyticus M19501]
gi|341949564|gb|EGT76168.1| UPF0001 protein [Haemophilus haemolyticus M19501]
Length = 233
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
Q++ A E + R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 12 QKIKTACEEARRDQNTVKLLAVSKTKPISAIISAYQAGQTAFGENYVQEGVEKIQYFGSQ 71
Query: 104 --DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
+LEWHFIG LQSNK + L+A + +++++ K A RLN+ + + PL VL+QV
Sbjct: 72 GINLEWHFIGPLQSNKTR-LVA--EHFDWMQTLNRAKTADRLNKQ-RPINKAPLNVLIQV 127
Query: 162 NTSGEE 167
N S EE
Sbjct: 128 NISDEE 133
>gi|386014364|ref|YP_005932641.1| Alanine racemase domain protein [Pseudomonas putida BIRD-1]
gi|313501070|gb|ADR62436.1| Alanine racemase domain protein [Pseudomonas putida BIRD-1]
Length = 228
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ R+ A++ R P ++++AVSKTKP S IR+++ AG FGENY+QE + K
Sbjct: 8 LSAISARIASASQAVGRDPASVQLLAVSKTKPASAIREIHAAGVHDFGENYLQEALTKQQ 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D L WHFIG +QSNK K + + V SVD KIA RL+ G PL +
Sbjct: 68 ALSDLPLIWHFIGPIQSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNIC 123
Query: 159 VQVNTSGEE 167
+QVN SGE+
Sbjct: 124 LQVNVSGED 132
>gi|270296423|ref|ZP_06202623.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D20]
gi|270273827|gb|EFA19689.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D20]
Length = 221
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P+++R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPEKVRLVAVSKFHPNEAIEEAYRAGQRVFGESKVQEMTAKYKSLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP +A++ +D+ K+ +N+ K + L+Q++ + EE +G F
Sbjct: 71 TNKIKYI---VPYVALIHGIDSYKLLAEVNKQA-AKAEKTVNCLLQLHIAREETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 DEC 129
>gi|336310594|ref|ZP_08565566.1| hypothetical protein SOHN41_01049 [Shewanella sp. HN-41]
gi|335866324|gb|EGM71315.1| hypothetical protein SOHN41_01049 [Shewanella sp. HN-41]
Length = 232
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA++ +R P+ IR++AVSKTKP+ I Y AG R FGENYVQE + K +L +
Sbjct: 14 RIAQAAQKCARLPNSIRLLAVSKTKPIEDIIAAYHAGQRDFGENYVQEGMAKILELKESY 73
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+EWHFIG LQSNK + + +V +KIA RLN + PL V +Q+N
Sbjct: 74 PDIEWHFIGPLQSNKTNIV---AQYFDWMHTVSRDKIALRLNEQ-RPISMAPLNVCIQIN 129
Query: 163 TSGE 166
S E
Sbjct: 130 ISNE 133
>gi|422603835|ref|ZP_16675853.1| hypothetical protein PSYMO_01090 [Pseudomonas syringae pv. mori
str. 301020]
gi|330886255|gb|EGH20156.1| hypothetical protein PSYMO_01090 [Pseudomonas syringae pv. mori
str. 301020]
Length = 228
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAANREPASVGLLAVSKTKPASDLREAYTAGLRNFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN S E
Sbjct: 121 NICIQVNVSDE 131
>gi|317157756|ref|XP_003190876.1| alanine racemase family protein [Aspergillus oryzae RIB40]
Length = 282
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGH 83
M AS A + L SV RV AA ++++ IR++AVSK KP + + +++ A H
Sbjct: 17 MPASPARTATLLSNLGSVTSRVTAAATKAAKESRPIRLIAVSKLKPAADVLALHQPPASH 76
Query: 84 RCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL 143
FGENY+QE+ EK+ LP ++WHFIG LQSNK L V L VESVD+EK A L
Sbjct: 77 LHFGENYLQELQEKSKLLPPTIKWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKASLL 136
Query: 144 NR--------MVETMGRKPLKVLVQVNTSGEE 167
++ + T L+V VQVNTSGEE
Sbjct: 137 DKGWGERSEELRATDQESQLRVFVQVNTSGEE 168
>gi|302189818|ref|ZP_07266491.1| hypothetical protein Psyrps6_25881 [Pseudomonas syringae pv.
syringae 642]
Length = 228
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|312066549|ref|XP_003136323.1| hypothetical protein LOAG_00735 [Loa loa]
gi|307768518|gb|EFO27752.1| YggS family pyridoxal phosphate enzyme [Loa loa]
Length = 265
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 9/141 (6%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPP----DRIRIVAVSKTKPVSVIRQVYEAGHRCFGEN 89
G L+ V++R+ A++++ + P + ++AVSKTK S+I+ Y+AG FGEN
Sbjct: 23 GALVDNLQLVLRRIENASKKAEQSPYWRGQKPSLIAVSKTKSSSLIQCCYDAGQMKFGEN 82
Query: 90 YVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM 146
Y+QE+ +KA L +++WHFIG +QSNK+ LA + NL+ VE++ N+K + L +
Sbjct: 83 YIQELADKAKTLKSKCPNIQWHFIGTIQSNKIAK-LAEINNLSCVETICNKKHSSILEKE 141
Query: 147 VETMGRKPLKVLVQVNTSGEE 167
+ R LKVLVQVNTS E+
Sbjct: 142 IAKHNR-TLKVLVQVNTSKEK 161
>gi|440720834|ref|ZP_20901246.1| hypothetical protein A979_08493 [Pseudomonas syringae BRIP34876]
gi|440727711|ref|ZP_20907937.1| hypothetical protein A987_16603 [Pseudomonas syringae BRIP34881]
gi|440363116|gb|ELQ00286.1| hypothetical protein A987_16603 [Pseudomonas syringae BRIP34881]
gi|440365204|gb|ELQ02318.1| hypothetical protein A979_08493 [Pseudomonas syringae BRIP34876]
Length = 228
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|78065293|ref|YP_368062.1| hypothetical protein Bcep18194_A3817 [Burkholderia sp. 383]
gi|77966038|gb|ABB07418.1| protein of unknown function UPF0001 [Burkholderia sp. 383]
Length = 257
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L SV QR+ AA + R P + ++AVSKT P +R + AG R FGENYVQE ++
Sbjct: 30 AARLESVHQRIADAARAAGRDPATVSLLAVSKTFPADDVRAAHAAGQRAFGENYVQESID 89
Query: 97 KAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
K L D DLEWHFIG LQSNK +P+ V SVD KIA RL+
Sbjct: 90 KIDALADLRADLEWHFIGPLQSNKTRPV---AERFDWVHSVDRLKIAQRLSEQ-RPAHLP 145
Query: 154 PLKVLVQVNTSGE 166
PL V VQVN SGE
Sbjct: 146 PLNVCVQVNISGE 158
>gi|66043744|ref|YP_233585.1| hypothetical protein Psyr_0477 [Pseudomonas syringae pv. syringae
B728a]
gi|63254451|gb|AAY35547.1| Protein of unknown function UPF0001 [Pseudomonas syringae pv.
syringae B728a]
Length = 228
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYNAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|345864320|ref|ZP_08816522.1| UPF0001 protein YggS [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877264|ref|ZP_08829017.1| pyridoxal phosphate enzyme [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344225731|gb|EGV52081.1| pyridoxal phosphate enzyme [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345124516|gb|EGW54394.1| UPF0001 protein YggS [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 229
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ A E +RPP R++AVSKT+ IR+ AG R FGE+Y+QE ++
Sbjct: 5 AQRLDRVNRRIKAAEELYNRPPGSTRLLAVSKTRTADEIREAVAAGQRAFGESYLQEALD 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K QL D LEWHFIG +Q NK KP+ V S+ + K A RLN+ G PL
Sbjct: 65 KHRQLQDLPLEWHFIGRIQGNKTKPIAEW---FDWVHSLGSLKHARRLNQQ-RPPGLAPL 120
Query: 156 KVLVQVNTSGE 166
K +Q+NTSGE
Sbjct: 121 KACIQINTSGE 131
>gi|37525148|ref|NP_928492.1| hypothetical protein plu1180 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784574|emb|CAE13474.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 231
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 78/129 (60%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V + AA++ R P+ I ++AVSKTKPV I + AG R FGENYVQE VEK A
Sbjct: 8 LQDVRTHIAIAAQKCERAPEEITLLAVSKTKPVEDIEKAIAAGQRQFGENYVQEGVEKIA 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+DL WHFIG LQSNK + L+A N ++D KIA RLN G +PL +
Sbjct: 68 YFANCNDLIWHFIGPLQSNKSR-LVA--ENFNWCHTIDRLKIAQRLNEQ-RPEGMEPLNI 123
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 124 LIQINISDE 132
>gi|294139814|ref|YP_003555792.1| hypothetical protein SVI_1043 [Shewanella violacea DSS12]
gi|293326283|dbj|BAJ01014.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 231
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L + R+ QAA+ SSR + I+++AVSKTKP S I Y AG R FGENYVQE
Sbjct: 5 ADRLANAQHRIEQAAQISSRNANEIQLLAVSKTKPNSDILAAYTAGQRRFGENYVQEGES 64
Query: 97 KAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
K L D ++EWHFIG LQSNK K + + + + +V EKIA RLN
Sbjct: 65 KVNALKDCCPEIEWHFIGPLQSNKTKIIAS---HFHWMHTVSREKIASRLNEQ-RPKEMP 120
Query: 154 PLKVLVQVNTSGE 166
PL + +Q+N SGE
Sbjct: 121 PLNICIQINISGE 133
>gi|220936080|ref|YP_002514979.1| alanine racemase domain-containing protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219997390|gb|ACL73992.1| alanine racemase domain protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 236
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 9/130 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V R+H+AA R R P I ++AVSKT+P +R+V G R FGENYVQE+ +KA
Sbjct: 8 LDTVRTRIHEAALRHGRDPATITLLAVSKTQPAEALREVMACGQRAFGENYVQELADKAD 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLK 156
L D EWHFIG LQSNK + L+AG+ + V S++ +KIA RL+ R E + L+
Sbjct: 68 ALADLRPEWHFIGPLQSNKTR-LIAGLAH--WVHSIERDKIARRLSEQRPGEAV---DLQ 121
Query: 157 VLVQVNTSGE 166
V +QVN E
Sbjct: 122 VCLQVNLDAE 131
>gi|307565803|ref|ZP_07628265.1| pyridoxal phosphate enzyme, YggS family [Prevotella amnii CRIS
21A-A]
gi|307345488|gb|EFN90863.1| pyridoxal phosphate enzyme, YggS family [Prevotella amnii CRIS
21A-A]
Length = 223
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 16/137 (11%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ ++++AVSK P+ I Y G R FGE+ VQE+ +K LP D+EWHFIG+LQ+NK
Sbjct: 16 PNGVKLIAVSKYHPIEYIEAAYAEGQRAFGESLVQELSKKVTSLPKDIEWHFIGHLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + VP ++M+E+VD+ K+ + + R +KVL++++ + EE YG F C
Sbjct: 76 VKYI---VPYISMIEAVDSVKLLREIEKQASKYNR-VIKVLLELHIAKEESKYGFSFEDC 131
Query: 176 -------SW---SHSCL 182
W SH C+
Sbjct: 132 RAFIDSGEWRNMSHVCI 148
>gi|209875933|ref|XP_002139409.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555015|gb|EEA05060.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 243
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
RI+ VSK +P+ I +Y +R FGENYV+E+V K+++LP+D+ WHFIG+LQ NKV+ L
Sbjct: 39 RILIVSKQQPIEAILDIYMLNYRHFGENYVKELVLKSSRLPEDIMWHFIGHLQRNKVRSL 98
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
L V NL ++ES+D+ ++A + ++ E M R + V +Q+ TS E
Sbjct: 99 LT-VKNLYIIESLDSIELAYLIQKICEEMKRY-VNVYIQIKTSTE 141
>gi|389714552|ref|ZP_10187129.1| hypothetical protein HADU_09226 [Acinetobacter sp. HA]
gi|388609856|gb|EIM38999.1| hypothetical protein HADU_09226 [Acinetobacter sp. HA]
Length = 228
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ A ++R PD ++++AVSKT+P +++ ++Y+AG R FGENY+QE +EK L
Sbjct: 11 VLAQIESACVEAARQPDSVQLLAVSKTQPSAILAEMYQAGQRAFGENYLQEALEKITALK 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
+ ++EWHFIG++Q NK KPL V VD IA RL+ E + PL + +QV
Sbjct: 71 ELEIEWHFIGHVQRNKTKPL---AEKFDWVHGVDRLIIAERLSNQRED-NQVPLNICLQV 126
Query: 162 NTSGEE 167
N G++
Sbjct: 127 NIDGQD 132
>gi|422666548|ref|ZP_16726416.1| hypothetical protein PSYAP_10145 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330977068|gb|EGH77028.1| hypothetical protein PSYAP_10145 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 236
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + A N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTR---AIAENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|323691969|ref|ZP_08106218.1| YggS family Pyridoxal phosphate enzyme [Clostridium symbiosum
WAL-14673]
gi|355628024|ref|ZP_09049553.1| YggS family pyridoxal phosphate enzyme [Clostridium sp. 7_3_54FAA]
gi|323503978|gb|EGB19791.1| YggS family Pyridoxal phosphate enzyme [Clostridium symbiosum
WAL-14673]
gi|354819992|gb|EHF04423.1| YggS family pyridoxal phosphate enzyme [Clostridium sp. 7_3_54FAA]
Length = 234
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 10/134 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + A S+R P + ++AVSKTKPV ++R+ Y+AG R FGEN VQEI+EKA
Sbjct: 6 LNDVKENIVSACRASNRQPQDVTLIAVSKTKPVELLREAYDAGIRDFGENKVQEILEKAP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV-- 157
LPDD+ WH IG+LQ NKV+ + + ++ SVD +A ++ + +K + V
Sbjct: 66 ALPDDIRWHMIGHLQKNKVRQV---IDKTVLIHSVDTVALAEQIEK---EAAKKNIDVDI 119
Query: 158 LVQVNTSGEE--YG 169
L++VN EE YG
Sbjct: 120 LLEVNIGEEESKYG 133
>gi|422300434|ref|ZP_16387951.1| hypothetical protein Pav631_4600 [Pseudomonas avellanae BPIC 631]
gi|407987374|gb|EKG30195.1| hypothetical protein Pav631_4600 [Pseudomonas avellanae BPIC 631]
Length = 228
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAKRDPVSVGLLAVSKTKPAGDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKP 154
K +L D L WHFIG +QSNK + A N A V SVD KIA RL+ + E++ +P
Sbjct: 65 KQLELADLPLCWHFIGPIQSNKTR---AIAENFAWVHSVDRLKIAQRLSEQRPESL--EP 119
Query: 155 LKVLVQVNTSGE 166
L + +QVN SGE
Sbjct: 120 LNICIQVNVSGE 131
>gi|329955861|ref|ZP_08296664.1| pyridoxal phosphate enzyme, YggS family [Bacteroides clarus YIT
12056]
gi|328525241|gb|EGF52291.1| pyridoxal phosphate enzyme, YggS family [Bacteroides clarus YIT
12056]
Length = 221
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P+ +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPEGVRLVAVSKFHPNEAIEEAYNAGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP +A++ VD+ K+ +N+ GR + L+Q++ + EE +G F
Sbjct: 71 TNKIKYI---VPYVALIHGVDSYKLLTEINKQAAKAGRM-VNCLLQLHIAQEETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 DEC 129
>gi|317493543|ref|ZP_07951964.1| YggS family pyridoxal phosphate enzyme [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918486|gb|EFV39824.1| YggS family pyridoxal phosphate enzyme [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 237
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L +V R+ AA+ R P+ + ++AVSKTKPVS I + AG R FGENYVQE V K
Sbjct: 9 LEAVRSRISAAAQDCGRSPEEVTLLAVSKTKPVSDIEETIAAGQRAFGENYVQEGVSKIQ 68
Query: 99 --AQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
AQ P D+LEWHFIG LQSNK + L+A + + +VD KIA RL+ +
Sbjct: 69 YFAQTPYADELEWHFIGPLQSNKSR-LVA--EHFDWIHTVDRVKIAQRLSEQ-RPADKAA 124
Query: 155 LKVLVQVNTSGE 166
L VL+Q+N S E
Sbjct: 125 LNVLIQINISDE 136
>gi|408479522|ref|ZP_11185741.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas sp.
R81]
Length = 228
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V QR+ AA+ R I ++AVSKTKP +R+ Y AG FGENY+QE + K +L
Sbjct: 11 VGQRIRAAADAVQRDASSIHLLAVSKTKPAQAVREAYAAGMHDFGENYLQEALGKQVELT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + N A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|421498969|ref|ZP_15946036.1| hypothetical protein B224_003144 [Aeromonas media WS]
gi|407182009|gb|EKE55999.1| hypothetical protein B224_003144 [Aeromonas media WS]
Length = 233
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAA R R D I+++AVSKTKP+ I+ Y AG R FGE+Y QE
Sbjct: 5 AQHLLQVKERIVQAARRVGRGADHIQLLAVSKTKPLDDIQAAYAAGQRRFGESYAQEAAL 64
Query: 97 KAAQLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L + D+EWHFIG LQSNK + + V+SVD +K+ RLN G
Sbjct: 65 KIDALREQAACQDIEWHFIGPLQSNKSRLV---AERFDWVQSVDRDKLIERLNNQ-RPAG 120
Query: 152 RKPLKVLVQVNTSGE 166
PL V +Q+N SGE
Sbjct: 121 LSPLNVCLQINISGE 135
>gi|326796926|ref|YP_004314746.1| hypothetical protein Marme_3700 [Marinomonas mediterranea MMB-1]
gi|326547690|gb|ADZ92910.1| protein of unknown function UPF0001 [Marinomonas mediterranea
MMB-1]
Length = 233
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +H R +R D + ++AVSKTKP+ I + YEAG R FGENYVQE V K
Sbjct: 8 LSRVKHDIHTLETRYNRIEDSVNLLAVSKTKPIEAIIEAYEAGQRLFGENYVQEAVSKYG 67
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+L + + WHFIG +QSNK + + + V +VD EKIA RL+ + + PL V
Sbjct: 68 ELQNYPGIVWHFIGPIQSNKSRQI---AETMDWVHTVDREKIARRLSEQ-RPISKPPLNV 123
Query: 158 LVQVNTSGE 166
L+QVN S E
Sbjct: 124 LIQVNISQE 132
>gi|291550389|emb|CBL26651.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus torques
L2-14]
Length = 230
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 16/136 (11%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T L+ V ++ A +R+ R + + ++AVSKTKP+ ++++ Y+ G R FGEN VQEI K
Sbjct: 4 TQLKEVEAKIQAACDRAGRKREEVTLIAVSKTKPIEMLQEAYDLGVRVFGENKVQEITAK 63
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK- 156
LPDD+ WH IG+LQ+NKVK ++ V ++ SVD+ K+A ET+ ++ K
Sbjct: 64 YDALPDDIHWHMIGHLQTNKVKYIIDKVD---LIHSVDSVKLA-------ETIEKEAAKH 113
Query: 157 -----VLVQVNTSGEE 167
+L++VN + EE
Sbjct: 114 NLTANILIEVNVAQEE 129
>gi|255936135|ref|XP_002559094.1| Pc13g06610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583714|emb|CAP91730.1| Pc13g06610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 268
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 80/136 (58%), Gaps = 16/136 (11%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPD 103
RV AA +S P IR+VAVSK KP S +++ FGENY+QE++EK+ LP
Sbjct: 22 RVSTAALQSPIPSKPIRLVAVSKLKPASDALALHQTPGSQLHFGENYLQELLEKSRLLPA 81
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------MVETM----G 151
++WHFIG LQSNK L VP L VESVD+EK A L++ M T G
Sbjct: 82 SIKWHFIGGLQSNKCVTLARDVPGLWAVESVDSEKKAKLLDKGWGDRSPEMAATNHDEDG 141
Query: 152 RKPLKVLVQVNTSGEE 167
R L+V VQVNTSGEE
Sbjct: 142 R--LRVYVQVNTSGEE 155
>gi|209694136|ref|YP_002262064.1| membrane protein, related to K+ transport [Aliivibrio salmonicida
LFI1238]
gi|208008087|emb|CAQ78228.1| membrane protein, related to K+ transport [Aliivibrio salmonicida
LFI1238]
Length = 255
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 18/141 (12%)
Query: 40 LRSVIQRVHQ-------AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
+ S+ Q +HQ + ++ R PD ++++AVSKTKP+ ++ Q E+G FGENYVQ
Sbjct: 1 MTSIKQNIHQITLQIENSIQKCGRSPDSVQLLAVSKTKPIELLEQAIESGQHSFGENYVQ 60
Query: 93 EIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
E V+K + LEWHFIG +QSNK +P+ + V S+D KIA RLN
Sbjct: 61 EGVDKVHYFQKNHSNIELEWHFIGPIQSNKTRPI---AEHFDWVHSIDRLKIAQRLNEQR 117
Query: 148 ET-MGRKPLKVLVQVNTSGEE 167
+ +G L VL+QVN S E+
Sbjct: 118 PSDLGE--LNVLIQVNISSED 136
>gi|311272383|ref|XP_003133416.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like isoform 1 [Sus scrofa]
Length = 234
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 9/110 (8%)
Query: 65 AVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD------DLEWHFIGNLQSNKV 118
A SKTKP ++ + Y G R FGENYVQE++EKA+ P +++WHFIG+LQ V
Sbjct: 3 ACSKTKPADMVIEAYNHGQRIFGENYVQELLEKASN-PKILSSCPEIKWHFIGHLQKQNV 61
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LKVLVQVNTSGEE 167
L+A VPNL M+E+VD+ K+A ++N + G LKV+VQVNTSGEE
Sbjct: 62 NKLMA-VPNLFMLETVDSMKLADKVNSSWQKKGSPERLKVMVQVNTSGEE 110
>gi|149909466|ref|ZP_01898121.1| Predicted enzyme with a TIM-barrel fold [Moritella sp. PE36]
gi|149807576|gb|EDM67525.1| Predicted enzyme with a TIM-barrel fold [Moritella sp. PE36]
Length = 231
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 9/136 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
+T L+ V+ ++ A S + I ++AVSKTKPV + VY G R FGENY+QE VE
Sbjct: 5 STRLQQVLTQIENATSASCKKRSEINLLAVSKTKPVEQVMAVYALGQRKFGENYLQEAVE 64
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L DD+EWHFIG +QSNK +P+ + V+S+D K+A RLN
Sbjct: 65 KITHLQQDGNYDDIEWHFIGPIQSNKTRPI---AEHFDWVQSIDRLKVAQRLNDQ-RPAD 120
Query: 152 RKPLKVLVQVNTSGEE 167
L V +Q+N S E+
Sbjct: 121 MPKLNVCIQINISAED 136
>gi|422638982|ref|ZP_16702412.1| hypothetical protein PSYCIT7_08289 [Pseudomonas syringae Cit 7]
gi|440742963|ref|ZP_20922285.1| hypothetical protein A988_06225 [Pseudomonas syringae BRIP39023]
gi|330951376|gb|EGH51636.1| hypothetical protein PSYCIT7_08289 [Pseudomonas syringae Cit 7]
gi|440376814|gb|ELQ13477.1| hypothetical protein A988_06225 [Pseudomonas syringae BRIP39023]
Length = 228
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP S +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPASDLREAYTAGLRDFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + A N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTR---AIAENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|30248969|ref|NP_841039.1| hypothetical protein NE0966 [Nitrosomonas europaea ATCC 19718]
gi|30138586|emb|CAD84877.1| Uncharacterized pyridoxal-5'-phosphate dependent enzyme family
UPF0001 [Nitrosomonas europaea ATCC 19718]
Length = 238
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A+ L++V R+ +AA+++ R P+ ++++A SKT +R+ +EAG FGENY+QE +
Sbjct: 5 ASRLQNVKNRIIEAAKKAGRDPESVQLLAASKTNTPDKLREAWEAGQTVFGENYLQEGLV 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K L D +EWHFIG +QSNK K L+A N + V +D EKIA RL+ PL
Sbjct: 65 KIRALSDLPIEWHFIGPIQSNKTK-LIA--ENFSWVHGIDREKIATRLS-AARPESLPPL 120
Query: 156 KVLVQVNTSGE 166
+V VQVN SGE
Sbjct: 121 QVCVQVNVSGE 131
>gi|365876496|ref|ZP_09416017.1| hypothetical protein EAAG1_09587 [Elizabethkingia anophelis Ag1]
gi|442586515|ref|ZP_21005343.1| putative enzyme with a TIM-barrel fold protein [Elizabethkingia
anophelis R26]
gi|365755808|gb|EHM97726.1| hypothetical protein EAAG1_09587 [Elizabethkingia anophelis Ag1]
gi|442563739|gb|ELR80946.1| putative enzyme with a TIM-barrel fold protein [Elizabethkingia
anophelis R26]
Length = 219
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +++VAVSKT P I++VY G R FGEN VQE+V K LP+D++WH IG+LQSNK
Sbjct: 15 PANVKLVAVSKTHPAEAIQEVYNLGQRVFGENKVQEMVAKQPILPNDIQWHLIGHLQSNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + V +ESVD+EK+ +N+ RK +KVL+QV + E+
Sbjct: 75 VKYVAEFVDT---IESVDSEKLLEEINKQAAKHNRK-IKVLLQVKIAEED 120
>gi|323486921|ref|ZP_08092237.1| hypothetical protein HMPREF9474_03988 [Clostridium symbiosum
WAL-14163]
gi|323399784|gb|EGA92166.1| hypothetical protein HMPREF9474_03988 [Clostridium symbiosum
WAL-14163]
Length = 234
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 10/134 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + A S+R P + ++AVSKTKPV ++R+ Y+AG R FGEN VQEI+EKA
Sbjct: 6 LNDVKENIVSACRASNRQPQDVTLIAVSKTKPVELLREAYDAGVRDFGENKVQEILEKAP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV-- 157
LPDD+ WH IG+LQ NKV+ + + ++ SVD +A ++ + +K + V
Sbjct: 66 ALPDDIRWHMIGHLQKNKVRQV---IDKTVLIHSVDTVALAEQIEK---EAAKKNIDVDI 119
Query: 158 LVQVNTSGEE--YG 169
L++VN EE YG
Sbjct: 120 LLEVNIGEEESKYG 133
>gi|330505390|ref|YP_004382259.1| alanine racemase domain-containing protein [Pseudomonas mendocina
NK-01]
gi|328919676|gb|AEB60507.1| alanine racemase domain-containing protein [Pseudomonas mendocina
NK-01]
Length = 230
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ S R I ++AVSKTKP IR+ + AG R FGENY+QE +EK QL D
Sbjct: 14 RIREAAQASQRNLADIGLLAVSKTKPAEAIREAHAAGLRDFGENYLQEALEKQTQLTDLP 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
L WHFIG +QSNK +P+ + V SVD KIA RL+ PL + +QVN S
Sbjct: 74 LIWHFIGPIQSNKTRPI---AEHFDWVHSVDRLKIAQRLSDQ-RPAHLPPLNICLQVNVS 129
Query: 165 GEE 167
GE+
Sbjct: 130 GED 132
>gi|67594591|ref|XP_665811.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656651|gb|EAL35580.1| hypothetical protein Chro.50329 [Cryptosporidium hominis]
Length = 238
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 63 IVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
++ VSK + I+ ++E + FGENYVQE++EK+ LP ++WHFIG+LQSNKVK L
Sbjct: 30 LLVVSKYQSEENIKLLHEKTDQKIFGENYVQELMEKSRNLPKSIKWHFIGHLQSNKVKTL 89
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
L+ + NL ++E+VD+ K+A LN+ + GR LKV++QV TS E
Sbjct: 90 LS-IDNLEVIETVDSIKLAQVLNKECQLQGRSVLKVMIQVKTSNE 133
>gi|393762532|ref|ZP_10351159.1| hypothetical protein AGRI_06097 [Alishewanella agri BL06]
gi|392606767|gb|EIW89651.1| hypothetical protein AGRI_06097 [Alishewanella agri BL06]
Length = 232
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 81/126 (64%), Gaps = 10/126 (7%)
Query: 45 QRVHQAAERSSRPPD--RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
Q++H+ +E SRP + R++AVSKTKPV+ I + AG R FGENY QE+ KAA+L
Sbjct: 14 QQLHKFSE--SRPASWPQPRLIAVSKTKPVADIVAAFAAGQRQFGENYPQELASKAAELT 71
Query: 103 --DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
+LEWHFIG LQSNK K L+A + V S+D EKIA RL+ PLKVL+Q
Sbjct: 72 HLGELEWHFIGPLQSNKTK-LVAE--TASWVHSIDREKIARRLSEQRPPQ-LPPLKVLLQ 127
Query: 161 VNTSGE 166
+N S E
Sbjct: 128 INISAE 133
>gi|154504399|ref|ZP_02041137.1| hypothetical protein RUMGNA_01903 [Ruminococcus gnavus ATCC 29149]
gi|336432351|ref|ZP_08612186.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
2_1_58FAA]
gi|153795328|gb|EDN77748.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus gnavus ATCC
29149]
gi|336018688|gb|EGN48425.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
2_1_58FAA]
Length = 230
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 16/134 (11%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V +R+ A +R+ R + + ++AVSKTKPVS+I + Y+ G +GEN VQE+ EK
Sbjct: 6 LKEVERRIQAACDRAGRKREEVTLIAVSKTKPVSMIEETYQLGIHVYGENKVQELTEKYE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK--- 156
LP D+EWH IG+LQ+NKVK + V A++ SVD+ K+A ET+ ++ K
Sbjct: 66 ILPKDIEWHMIGHLQTNKVKYI---VGKTALIHSVDSLKLA-------ETIEKEAAKKNC 115
Query: 157 ---VLVQVNTSGEE 167
+LV+VN + EE
Sbjct: 116 IQDILVEVNVAQEE 129
>gi|419801268|ref|ZP_14326505.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK262]
gi|419844413|ref|ZP_14367702.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK2019]
gi|385193999|gb|EIF41345.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK262]
gi|386417324|gb|EIJ31809.1| pyridoxal phosphate enzyme, YggS family [Haemophilus parainfluenzae
HK2019]
Length = 234
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 7/131 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL ++ Q++ + + + RP + ++AVSKTKP I + Y+AG + FGENYVQE V+K
Sbjct: 6 ALETIHQQIQTSTQLAHRPESSVTLLAVSKTKPNEAILEAYQAGQKAFGENYVQEGVDKI 65
Query: 99 AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
LEWHFIG LQSNK + L+A + +++++ EKIA RLN + PL
Sbjct: 66 QYFETQNIQLEWHFIGPLQSNKTR-LVA--EHFDWMQTLEREKIADRLNEQ-RPANKAPL 121
Query: 156 KVLVQVNTSGE 166
VL+Q+N S E
Sbjct: 122 NVLIQINISDE 132
>gi|373467136|ref|ZP_09558439.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sp. oral taxon
851 str. F0397]
gi|371759319|gb|EHO48059.1| pyridoxal phosphate enzyme, YggS family [Haemophilus sp. oral taxon
851 str. F0397]
Length = 233
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + Q++ A + R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK
Sbjct: 7 LNLIHQKIETACNEAKRNQNTVKLLAVSKTKPISAILSAYQAGQIAFGENYVQEGVEKIQ 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+LEWHFIG LQSNK + + + ++++D KIA RLN T + PL
Sbjct: 67 YFESQGINLEWHFIGPLQSNKTRLV---SEHFDWMQTLDRAKIAERLNEQRPT-NKAPLN 122
Query: 157 VLVQVNTSGEE 167
VL+Q+N S EE
Sbjct: 123 VLIQINISDEE 133
>gi|146309164|ref|YP_001189629.1| alanine racemase domain-containing protein [Pseudomonas mendocina
ymp]
gi|421505778|ref|ZP_15952713.1| alanine racemase domain-containing protein [Pseudomonas mendocina
DLHK]
gi|145577365|gb|ABP86897.1| alanine racemase domain protein [Pseudomonas mendocina ymp]
gi|400343475|gb|EJO91850.1| alanine racemase domain-containing protein [Pseudomonas mendocina
DLHK]
Length = 230
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ S R I ++AVSKTKP IR+ + AG R FGENY+QE +EK A L D
Sbjct: 14 RIREAAQASQRNFADIGLLAVSKTKPADAIREAHAAGLRDFGENYLQEALEKQAALSDLP 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
L WHFIG +QSNK +P+ + V SVD KIA RL+ PL + +QVN S
Sbjct: 74 LIWHFIGPIQSNKTRPI---AEHFDWVHSVDRLKIAQRLSDQ-RPAHLAPLNICLQVNVS 129
Query: 165 GEE 167
GE+
Sbjct: 130 GED 132
>gi|113461358|ref|YP_719427.1| hypothetical protein HS_1215 [Haemophilus somnus 129PT]
gi|112823401|gb|ABI25490.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 231
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + +++ Q E++ R + ++AVSKTKPV I Y+AG FGENYVQE VEK
Sbjct: 8 LAKINRQISQYCEQAKRNSSTVSLLAVSKTKPVEDILIAYQAGQTAFGENYVQEGVEKIQ 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+ LEWHFIG LQSNK K L+A N ++++D EKIA RLN ++PL
Sbjct: 68 YFIEQHIQLEWHFIGPLQSNKTK-LVA--ENFDWMQTLDREKIATRLNEQ-RPHYKQPLN 123
Query: 157 VLVQVNTSGE 166
VL+Q+N S E
Sbjct: 124 VLIQINISAE 133
>gi|271501904|ref|YP_003334930.1| alanine racemase domain-containing protein [Dickeya dadantii
Ech586]
gi|270345459|gb|ACZ78224.1| alanine racemase domain protein [Dickeya dadantii Ech586]
Length = 243
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L+ V Q++ AA+R R P+ I ++AVSKTKPVS + + AG R FGENYVQE V+K
Sbjct: 14 LQDVRQKISAAAQRCGRAPEEITLLAVSKTKPVSALEEAIAAGQRAFGENYVQEGVDKVR 73
Query: 99 ---AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
LPD LEWHFIG LQSNK + L+A + ++D +IA RL+ P
Sbjct: 74 HFQTALPDVALEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIAQRLSEQ-RPAHLPP 129
Query: 155 LKVLVQVNTSGE 166
L VL+QVN S E
Sbjct: 130 LNVLLQVNISQE 141
>gi|108761718|ref|YP_630860.1| hypothetical protein MXAN_2641 [Myxococcus xanthus DK 1622]
gi|108465598|gb|ABF90783.1| conserved hypothetical protein TIGR00044 [Myxococcus xanthus DK
1622]
Length = 227
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 34 GVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
G A L SV +RV A R+ RP + + +VAVSK KP +IR+ Y AG R FGENY QE
Sbjct: 3 GSVAERLASVRERVVAACARAGRPVESVTLVAVSKLKPADLIREAYAAGQRDFGENYAQE 62
Query: 94 IVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
+ +KAA+L D L WH IG LQ+NKVK + ++D ++A L++ E G
Sbjct: 63 LRDKAAELADLEGLRWHSIGALQTNKVKYVARAA---GAFHALDRLEVARELSKRRE--G 117
Query: 152 RKPLKVLVQVNTSGE 166
PL V V+VN GE
Sbjct: 118 APPLPVYVEVNVGGE 132
>gi|307260503|ref|ZP_07542197.1| hypothetical protein appser12_780 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869815|gb|EFN01598.1| hypothetical protein appser12_780 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 227
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 6/112 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIEEAIAAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGALQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEY 168
K + L+A N +++VD KIA RL+ + + PL VL+Q+N S E Y
Sbjct: 84 KTR-LVA--ENFDWIQTVDRLKIAERLSAQ-RSANKAPLNVLIQINISDEAY 131
>gi|66357680|ref|XP_626018.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46227312|gb|EAK88262.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 245
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 63 IVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
++ VSK + I+ ++E + FGENYVQE++EK+ LP ++WHFIG+LQSNKVK L
Sbjct: 37 LLVVSKYQSEENIKLLHEKTDQKIFGENYVQELMEKSRNLPKSIKWHFIGHLQSNKVKTL 96
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
L+ + NL ++E+VD+ K+A LN+ + GR LKV++QV TS E
Sbjct: 97 LS-IDNLEVIETVDSIKLAQVLNKECQLQGRSVLKVMIQVKTSNE 140
>gi|384083116|ref|ZP_09994291.1| alanine racemase domain-containing protein [gamma proteobacterium
HIMB30]
Length = 235
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 73/124 (58%), Gaps = 10/124 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
++S IQ AA R + ++AVSKTKP S I ++ G R FGENYVQE V K
Sbjct: 14 IKSAIQHAESAANRER---GSVHLLAVSKTKPASDIEALFRLGQRQFGENYVQEAVNKID 70
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D D+EWH+IG++QSNK K + V ++D EKIA RLN E KPL +L
Sbjct: 71 SLSDLDIEWHYIGHIQSNKTKIIATA---FDWVHTIDREKIASRLN---EARVGKPLNIL 124
Query: 159 VQVN 162
+QVN
Sbjct: 125 IQVN 128
>gi|71909495|ref|YP_287082.1| hypothetical protein Daro_3884 [Dechloromonas aromatica RCB]
gi|71849116|gb|AAZ48612.1| Protein of unknown function UPF0001 [Dechloromonas aromatica RCB]
Length = 229
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L++V R+ AA + R PD +R++AVSKT P+S + +AG R FGENYVQE ++
Sbjct: 5 ADNLQAVHSRIALAAAAAGRSPDTVRLLAVSKTWPLSCVLDAADAGQRAFGENYVQEGID 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K A + +LEWHFIG LQSNK +P+ V S++ KIA RL+ PL
Sbjct: 65 KIAAISGRNLEWHFIGPLQSNKSRPV---AERFDWVHSIERLKIAERLSAQRPAY-LPPL 120
Query: 156 KVLVQVNTSGE 166
+V +QVN SGE
Sbjct: 121 QVCIQVNVSGE 131
>gi|374107007|gb|AEY95915.1| FADL301Cp [Ashbya gossypii FDAG1]
Length = 268
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE-AGHRCFGENYVQEIVEKAAQL 101
V +RV ++ E R + ++AVSK KP S + +YE G R FGENYVQE+V KAA+L
Sbjct: 39 VDERVSRSMEECGRRRSEVLLLAVSKLKPASDVAILYEEMGLRHFGENYVQELVGKAAEL 98
Query: 102 PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL--V 159
P D++WHFIG LQSNK K LA V NL VE++D+ K +L +L +
Sbjct: 99 PGDIQWHFIGALQSNKCKD-LAKVANLYAVETIDSLKKVRKLEEARAKFQPDAPAILCSI 157
Query: 160 QVNTSGE 166
+VNTSGE
Sbjct: 158 EVNTSGE 164
>gi|392308134|ref|ZP_10270668.1| PLP-binding domain-containing protein [Pseudoalteromonas citrea
NCIMB 1889]
Length = 236
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L S RV + A+++ + + I+AVSKTKP+ +I Y+AGHR FGE+YVQE VE
Sbjct: 14 AERLTSAYSRV-EIAQQNCQFEHPLTILAVSKTKPLEMIENAYQAGHRQFGESYVQEAVE 72
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
K L ++EWHFIG +QSNK + L+A N + V+SVD EK+A RLN P
Sbjct: 73 KVQALKHLQNIEWHFIGPIQSNKSR-LVA--ENFSWVQSVDREKLARRLNEQ-RPNNLMP 128
Query: 155 LKVLVQVNTSGEE 167
L +L+QVN S ++
Sbjct: 129 LNILIQVNISNDD 141
>gi|330918264|ref|XP_003298159.1| hypothetical protein PTT_08769 [Pyrenophora teres f. teres 0-1]
gi|311328814|gb|EFQ93739.1| hypothetical protein PTT_08769 [Pyrenophora teres f. teres 0-1]
Length = 269
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 8/121 (6%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAG---HRCFGENYVQEIVEKAAQLPDDLEWHFIG 111
S+ ++R++AVSK KP + I +++ H FGENYVQE++EK+ LP + WH IG
Sbjct: 30 SKDGKQVRLIAVSKLKPANDILALHQKPDPIHTHFGENYVQELIEKSKLLPRTIRWHMIG 89
Query: 112 NLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK-----PLKVLVQVNTSGE 166
LQSNK K L +PNL V SVD+EK A L + + + K L+V VQVNTSGE
Sbjct: 90 GLQSNKCKQLAEQIPNLWCVSSVDSEKKANELEKGRKALSEKDNSEEKLRVKVQVNTSGE 149
Query: 167 E 167
+
Sbjct: 150 K 150
>gi|170589287|ref|XP_001899405.1| Hypothetical UPF0001 protein F09E5.8 in chromosome II [Brugia
malayi]
gi|158593618|gb|EDP32213.1| Hypothetical UPF0001 protein F09E5.8 in chromosome II, putative
[Brugia malayi]
Length = 268
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 86/135 (63%), Gaps = 9/135 (6%)
Query: 40 LRSVIQRVHQAAERSSRPP----DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
LR + +R+ ++++ + P + +VAVSKTK S+I+ Y+AG FGENY+QE+V
Sbjct: 29 LRLIRRRIENVSKKAEQSPYWRGQKPSLVAVSKTKSSSLIQCCYDAGQMKFGENYIQELV 88
Query: 96 EKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
+KA L ++ WHFIG +QSNK+ LA + L+ VE++ N+K A L + V R
Sbjct: 89 DKAEALKSKCPNIRWHFIGTVQSNKIAK-LAEIDTLSCVETICNKKHASMLEKEVAKHNR 147
Query: 153 KPLKVLVQVNTSGEE 167
K LKVLVQVNTS E+
Sbjct: 148 K-LKVLVQVNTSKEK 161
>gi|343083650|ref|YP_004772945.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342352184|gb|AEL24714.1| protein of unknown function UPF0001 [Cyclobacterium marinum DSM
745]
Length = 227
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 77/109 (70%), Gaps = 6/109 (5%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
+VAVSKTKP+S I++ Y+AG R FGEN VQEI+EKA LP D++WH IG+LQ NKVK +
Sbjct: 24 LVAVSKTKPISAIQEAYDAGIRDFGENKVQEIIEKAPALPQDIKWHMIGHLQRNKVKFI- 82
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS--GEEYG 169
VP + ++ SVD+ ++ ++N+ E + K + L+QV+ + G ++G
Sbjct: 83 --VPFIYLIHSVDSLRLLKQINKEAEKI-NKTIHCLLQVHIAKEGTKFG 128
>gi|90023281|ref|YP_529108.1| hypothetical protein Sde_3641 [Saccharophagus degradans 2-40]
gi|89952881|gb|ABD82896.1| Protein of unknown function UPF0001 [Saccharophagus degradans 2-40]
Length = 226
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ SV Q++ A + R P I+++AVSKT+P ++ YEAG R FGENY+QE ++K
Sbjct: 8 IESVRQQITACANAAKRDPASIKLLAVSKTQPAERLQAAYEAGQRAFGENYLQEALDKIN 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L + D+EWHFIG +QSNK + + N V ++D KIA RLN G PL V
Sbjct: 68 ALSNLDIEWHFIGPVQSNKTRDI---SENFDWVHTLDRLKIAQRLNDQ-RPAGTPPLNVC 123
Query: 159 VQVNTSGE 166
+QVN E
Sbjct: 124 IQVNIDQE 131
>gi|359442833|ref|ZP_09232692.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20429]
gi|392533391|ref|ZP_10280528.1| PLP-binding domain-containing protein [Pseudoalteromonas arctica A
37-1-2]
gi|358035332|dbj|GAA68941.1| UPF0001 protein yggS [Pseudoalteromonas sp. BSi20429]
Length = 237
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L S R+ AA+ + R + + ++AVSKTKP + YE G R FGE+YVQE ++K A
Sbjct: 17 LTSAYARIADAAKIAQRNTNEVTLLAVSKTKPSEDVIAAYEHGQREFGESYVQEAIDKIA 76
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
QL D+ WHFIG +QSNK L+A N V+SVD KIA RL+ ++PL +
Sbjct: 77 QLQSYSDIIWHFIGPIQSNK-SALVAA--NFDWVQSVDRIKIAKRLDSQ-RPDDKQPLNI 132
Query: 158 LVQVNTSGEE 167
L+QVN S EE
Sbjct: 133 LIQVNISNEE 142
>gi|253990754|ref|YP_003042110.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|211639085|emb|CAR67697.1| Hypothetical protein yggS [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782204|emb|CAQ85368.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 231
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEW 107
AA++ R P+ I ++AVSKTKPV I + AG R FGENYVQE VEK DDL W
Sbjct: 18 AAQKCERAPEEITLLAVSKTKPVEDIEKAIIAGQRQFGENYVQEGVEKITHFANRDDLIW 77
Query: 108 HFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
HFIG LQSNK + L+A N ++D KIA RL+ G KPL +L+Q+N S E+
Sbjct: 78 HFIGPLQSNKSR-LVA--ENFDWCHTIDRLKIAQRLSEQ-RPEGMKPLNILIQINISDEQ 133
>gi|343505678|ref|ZP_08743235.1| hypothetical protein VII00023_16806 [Vibrio ichthyoenteri ATCC
700023]
gi|342806442|gb|EGU41664.1| hypothetical protein VII00023_16806 [Vibrio ichthyoenteri ATCC
700023]
Length = 238
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R + ++++AVSKTKP I AG + FGENYVQE V+K
Sbjct: 8 IEQITLQISSAQQKCGRAQESVQLLAVSKTKPNQAILDAALAGQQMFGENYVQEGVDKVT 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ ++EWHFIG +QSNK +P+ N A V +VD KIA RLN + P
Sbjct: 68 YFSEQHPSLEIEWHFIGPIQSNKTRPV---AENFAWVHTVDRAKIAQRLNDQRPSQ-LPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|170718483|ref|YP_001783697.1| alanine racemase [Haemophilus somnus 2336]
gi|168826612|gb|ACA31983.1| alanine racemase domain protein [Haemophilus somnus 2336]
Length = 244
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + +++ Q E++ R + ++AVSKTKPV I Y+AG FGENYVQE VEK
Sbjct: 21 LAKINRQISQYCEQAKRHSSTVSLLAVSKTKPVEDILIAYQAGQTAFGENYVQEGVEKIQ 80
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
+ LEWHFIG LQSNK K L+A N ++++D EKIA RLN ++PL
Sbjct: 81 YFIEQHIQLEWHFIGPLQSNKTK-LVA--ENFDWMQTLDREKIATRLNEQ-RPHYKQPLN 136
Query: 157 VLVQVNTSGE 166
VL+Q+N S E
Sbjct: 137 VLIQINISAE 146
>gi|194337101|ref|YP_002018895.1| alanine racemase domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309578|gb|ACF44278.1| alanine racemase domain protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 229
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 92/146 (63%), Gaps = 18/146 (12%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
D +AA + ++ +++H A + R P +R++AVSKT P S+I++ ++AGH FGE+YVQ
Sbjct: 2 DSIAAN-IETIREQIHAACIEAGRDPAGVRLIAVSKTHPASLIKEAFDAGHIVFGESYVQ 60
Query: 93 EIVEKA-----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
E +EK AQL +EWHFIG+LQSNK++ ++ V +++ +D A L++
Sbjct: 61 EFLEKCEDPLLAQL--GIEWHFIGHLQSNKIRSIIGKV---SLIHGIDKLSTAEELSKRA 115
Query: 148 ETMGRKPLKV--LVQVNTSGE--EYG 169
R L+V L++VNTSGE +YG
Sbjct: 116 L---RNNLQVDYLLEVNTSGEASKYG 138
>gi|398975868|ref|ZP_10685894.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM25]
gi|398139860|gb|EJM28848.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM25]
Length = 228
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ A + ++R D ++++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VSSRIQAATQAANRSEDSVQLLAVSKTKPAQALREAYAAGLRDFGENYLQEALGKQLELT 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + + A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLIWHFIGPIQSNKTRSI---AEHFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|255715669|ref|XP_002554116.1| KLTH0E14652p [Lachancea thermotolerans]
gi|238935498|emb|CAR23679.1| KLTH0E14652p [Lachancea thermotolerans CBS 6340]
Length = 255
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ ++ VSK KP S I+ +Y+ G R FGENYVQE++ KA LP D+ WHFIG LQ+NK K
Sbjct: 41 VSLLPVSKLKPASDIQLLYDHGLRSFGENYVQELISKAEILPKDIRWHFIGGLQTNKCKD 100
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL--VQVNTSGE 166
LA V NL VE++D+ K A +LN + + K+L VQ+NTS E
Sbjct: 101 -LAKVENLYAVETIDSLKKAKKLNEARAKLHPQANKILCNVQINTSEE 147
>gi|238752323|ref|ZP_04613802.1| alanine racemase [Yersinia rohdei ATCC 43380]
gi|238709484|gb|EEQ01723.1| alanine racemase [Yersinia rohdei ATCC 43380]
Length = 231
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 79/133 (59%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V ++ AA +R P+ + ++AVSKTKPV+ I + AG FGENYVQE V+K
Sbjct: 8 LQDVRAQIATAARNCARSPEEVTLLAVSKTKPVTAIEEAIAAGQYAFGENYVQEGVDKIR 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
D +LEWHFIG LQSNK K L+A N A +VD KIA RL+ + G
Sbjct: 68 YFTDNAPTSNLEWHFIGPLQSNKSK-LVA--ENFAWCHTVDRLKIAQRLSAQRPS-GMPA 123
Query: 155 LKVLVQVNTSGEE 167
L VL+QVN S E+
Sbjct: 124 LNVLIQVNISDEQ 136
>gi|94971230|ref|YP_593278.1| hypothetical protein Acid345_4204 [Candidatus Koribacter versatilis
Ellin345]
gi|94553280|gb|ABF43204.1| Protein of unknown function UPF0001 [Candidatus Koribacter
versatilis Ellin345]
Length = 231
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + +R+ AA+ ++R P I ++AV KTKP IR+ Y AG R FGEN VQE KA
Sbjct: 7 ISGIRRRIETAAKHAARNPVEIALMAVCKTKPADAIREAYAAGQRLFGENRVQEFATKAP 66
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D +H IG+LQSNK K A + V+SVD+ K+A RLN +G K L +
Sbjct: 67 LLSGLSDARFHMIGHLQSNKSK---AAAELFSAVDSVDSLKLAERLNAAARDLG-KTLDI 122
Query: 158 LVQVNTSGEE 167
L+++N GEE
Sbjct: 123 LIEINVGGEE 132
>gi|160891909|ref|ZP_02072912.1| hypothetical protein BACUNI_04367 [Bacteroides uniformis ATCC 8492]
gi|156858387|gb|EDO51818.1| pyridoxal phosphate enzyme, YggS family [Bacteroides uniformis ATCC
8492]
Length = 221
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P ++R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPGKVRLVAVSKFHPNEAIEEAYRAGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP +A++ +D+ K+ +++ G K + L+Q++ + EE +G F
Sbjct: 71 TNKIKYI---VPYVALIHGIDSYKLLAEVDKQAAKAG-KTVNCLLQLHIAREETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 DEC 129
>gi|423303229|ref|ZP_17281228.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T00C23]
gi|423308050|ref|ZP_17286040.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T12C37]
gi|392688459|gb|EIY81744.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T00C23]
gi|392689035|gb|EIY82318.1| YggS family pyridoxal phosphate enzyme [Bacteroides uniformis
CL03T12C37]
Length = 221
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P ++R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPGKVRLVAVSKFHPNEAIEEAYRAGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NK+K + VP +A++ +D+ K+ +++ G K + L+Q++ + EE +G F
Sbjct: 71 TNKIKYI---VPYVALIHGIDSYKLLAEVDKQAAKAG-KTVNCLLQLHIAREETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 DEC 129
>gi|346306281|ref|ZP_08848439.1| YggS family pyridoxal phosphate enzyme [Dorea formicigenerans
4_6_53AFAA]
gi|345900086|gb|EGX69914.1| YggS family pyridoxal phosphate enzyme [Dorea formicigenerans
4_6_53AFAA]
Length = 234
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 8/136 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V Q++ A ERS R + ++AVSKTKP ++++ Y+ G R FGEN VQEI++K+
Sbjct: 6 LENVEQKIQAACERSGRDRSEVTLIAVSKTKPAEMVQEAYDLGIRLFGENKVQEIMDKSE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
LP D+ WH IG+LQ NK+K ++ V ++ SVD+ ++A + + +K L KV
Sbjct: 66 VLPADIHWHMIGHLQRNKIKYIIDKVD---LIHSVDSLRLAEAIEK---EAAKKHLIAKV 119
Query: 158 LVQVNTSGEEYGECFI 173
L++VN EE F+
Sbjct: 120 LIEVNVGREESKFGFL 135
>gi|227536720|ref|ZP_03966769.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227243412|gb|EEI93427.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 229
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ +VAVSKTKP I Q YEAG R FGEN VQE+VEK QLP D++WH IG+LQ+NKVK
Sbjct: 19 VTLVAVSKTKPNEDILQAYEAGQRVFGENMVQELVEKQEQLPKDIQWHLIGHLQTNKVKY 78
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNR 145
+ P + M+ESVD+ K+ +N+
Sbjct: 79 I---APFIHMIESVDSIKLLKEINK 100
>gi|392394897|ref|YP_006431499.1| pyridoxal phosphate enzyme, YggS family [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525975|gb|AFM01706.1| pyridoxal phosphate enzyme, YggS family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 239
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+HQAA +S R P I+++AVSKT V + + YEAG R F EN VQE +K
Sbjct: 7 LSAVQQRIHQAAVKSGRDPSAIKLLAVSKTMSVGTVEKAYEAGQRFFAENRVQEWQDKVI 66
Query: 100 QLPDDLEWHFIGNLQSNKVK------PLLAGVPNLAMVESVDNE 137
QLP D EWH IG LQ+NKVK L+ + L+++E+++++
Sbjct: 67 QLPKDCEWHLIGRLQTNKVKYLDERVTLIHSLDRLSLLETLESQ 110
>gi|153810902|ref|ZP_01963570.1| hypothetical protein RUMOBE_01286 [Ruminococcus obeum ATCC 29174]
gi|149833298|gb|EDM88380.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus obeum ATCC
29174]
Length = 230
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 82/131 (62%), Gaps = 10/131 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + +A +R P + +++VSKTKPVS++++ Y+AG R FGEN VQEI++K
Sbjct: 6 LEQVRKNIEEACRAVNRDPGEVTLISVSKTKPVSMLQEAYDAGSRDFGENKVQEIMDKYP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK---PLK 156
QLP D+ WH IG+LQ NKVK + V +A++ SVD + RL +E K +
Sbjct: 66 QLPSDIRWHMIGHLQRNKVKYI---VDKVALIHSVD----SLRLAETIENEAAKHNVTVP 118
Query: 157 VLVQVNTSGEE 167
+L++VN + EE
Sbjct: 119 ILIEVNVAQEE 129
>gi|171058313|ref|YP_001790662.1| alanine racemase domain-containing protein [Leptothrix cholodnii
SP-6]
gi|170775758|gb|ACB33897.1| alanine racemase domain protein [Leptothrix cholodnii SP-6]
Length = 229
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
AT L+ V R+ A + RP + + ++AVSKT+P IR + AG R FGENYVQE +
Sbjct: 5 ATRLQQVHGRLTNACRAAQRPDNSVALLAVSKTQPADAIRCAHAAGQRAFGENYVQEALA 64
Query: 97 KAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
K AQL D +EWH IG LQ NK + + V S+D +IA RL+ G
Sbjct: 65 KIAQLADLRQQIEWHLIGPLQGNKTRVV---AEAFDWVHSIDRLRIAQRLSEQ-RPAGAA 120
Query: 154 PLKVLVQVNTSGE 166
PL+V +QVN SGE
Sbjct: 121 PLQVCLQVNISGE 133
>gi|319901735|ref|YP_004161463.1| alanine racemase [Bacteroides helcogenes P 36-108]
gi|319416766|gb|ADV43877.1| alanine racemase domain protein [Bacteroides helcogenes P 36-108]
Length = 222
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P+ +++VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 11 SELPEGVQLVAVSKFHPNEAIEEAYRAGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQ 70
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
SNK+K + VP +A++ +D+ K+ +N+ M R + L+Q++ + EE +G F
Sbjct: 71 SNKIKYI---VPYVALIHGIDSYKLLAEVNKQAAKMNR-TVDCLLQLHIAREETKFGFSF 126
Query: 173 IKC 175
+C
Sbjct: 127 DEC 129
>gi|212709355|ref|ZP_03317483.1| hypothetical protein PROVALCAL_00391 [Providencia alcalifaciens DSM
30120]
gi|212688267|gb|EEB47795.1| hypothetical protein PROVALCAL_00391 [Providencia alcalifaciens DSM
30120]
Length = 230
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ AA R P I ++AVSKTKP I + EAG R FGENYVQE VEK
Sbjct: 7 LSDVTERIRLAATECHRSPQDITLLAVSKTKPCEAIMEAIEAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+DL WHFIG LQSNK + L+A + ++D KIA RLN + PL V
Sbjct: 67 YFSERNDLVWHFIGPLQSNKSR-LVA--EHFDWFHTLDRAKIAQRLNEQ-RPQDKAPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|322834238|ref|YP_004214265.1| alanine racemase [Rahnella sp. Y9602]
gi|384259420|ref|YP_005403354.1| alanine racemase [Rahnella aquatilis HX2]
gi|321169439|gb|ADW75138.1| alanine racemase domain protein [Rahnella sp. Y9602]
gi|380755396|gb|AFE59787.1| alanine racemase [Rahnella aquatilis HX2]
Length = 239
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V +++ AA+ R P+ I ++AVSKTKP S + + AG FGENYVQE V+K A
Sbjct: 13 LQNVREKIAAAAQHCGRSPEEITLLAVSKTKPASAVEEAIAAGQLAFGENYVQEGVDKIA 72
Query: 100 QLPDD---LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L WHFIG LQSNK + L+A N ++D KIA RLN G PL+
Sbjct: 73 HFAGHQPALTWHFIGPLQSNKSR-LVA--ENFDWCHTIDRLKIAQRLNEQ-RPAGLAPLQ 128
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 129 VLIQVNISDE 138
>gi|423302464|ref|ZP_17280487.1| YggS family pyridoxal phosphate enzyme [Bacteroides finegoldii
CL09T03C10]
gi|408471555|gb|EKJ90087.1| YggS family pyridoxal phosphate enzyme [Bacteroides finegoldii
CL09T03C10]
Length = 224
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQSNK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQSNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDTYKLLAEVNKQAGKAGR-TVNCLLQIHVAQEE 120
>gi|238759328|ref|ZP_04620494.1| alanine racemase [Yersinia aldovae ATCC 35236]
gi|238702489|gb|EEP95040.1| alanine racemase [Yersinia aldovae ATCC 35236]
Length = 228
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V ++ AA +R P+ + ++AVSKTKPV+ I + AG FGENYVQE V+K
Sbjct: 8 LQDVRAKIATAARNCARSPEEVILLAVSKTKPVTAIEEAIAAGQYAFGENYVQEGVDKIH 67
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ +LEWHFIG LQSNK + L+A N A +VD KIA RL+ PL V
Sbjct: 68 YFANNANLEWHFIGPLQSNKSR-LVA--ENFAWCHTVDRLKIAQRLSAQ-RPAAMPPLNV 123
Query: 158 LVQVNTSGEE 167
L+QVN S EE
Sbjct: 124 LIQVNISDEE 133
>gi|260642854|ref|ZP_05417592.2| pyridoxal phosphate enzyme, YggS family [Bacteroides finegoldii DSM
17565]
gi|260620282|gb|EEX43153.1| pyridoxal phosphate enzyme, YggS family [Bacteroides finegoldii DSM
17565]
Length = 226
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQSNK
Sbjct: 17 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQSNK 76
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D K+ +N+ GR + L+Q++ + EE
Sbjct: 77 IKYM---IPYVAMIHGIDTYKLLAEVNKQAGKAGR-TVNCLLQIHVAQEE 122
>gi|308493557|ref|XP_003108968.1| hypothetical protein CRE_11760 [Caenorhabditis remanei]
gi|308247525|gb|EFO91477.1| hypothetical protein CRE_11760 [Caenorhabditis remanei]
Length = 244
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Query: 54 SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP---DDLEWHFI 110
SS R R+VAVSKTKP +I Y G R FGENYVQE+ EK+A L ++ WHFI
Sbjct: 23 SSSATQRCRLVAVSKTKPAELIESCYTQGQRHFGENYVQELEEKSAVLAQKCQEIRWHFI 82
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG--RKPLKVLVQVNTSGEE 167
G +QSNK+ + P + VE+V+ EK A ++ G PL+V VQVNTS EE
Sbjct: 83 GQVQSNKIGK-ICNSPGIWCVETVETEKHARLFDKEWSKYGATSSPLRVFVQVNTSEEE 140
>gi|354605258|ref|ZP_09023247.1| YggS family pyridoxal phosphate enzyme [Alistipes indistinctus YIT
12060]
gi|353347837|gb|EHB92113.1| YggS family pyridoxal phosphate enzyme [Alistipes indistinctus YIT
12060]
Length = 221
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
AE + P +R+VAVSKT P V+R+ Y+AG R FGEN QE+ K QLP D+EWH I
Sbjct: 8 AELKASLPAGVRLVAVSKTYPAEVVREAYDAGQRLFGENRPQEMDAKRQQLPADIEWHMI 67
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
G+LQ+NKVK + P ++M+ SVD+ K+ G +N R + VL +V+ + EE
Sbjct: 68 GHLQTNKVKLI---APYVSMIHSVDSAKLLGVINEQALKNNR-VIDVLFEVHVAREE 120
>gi|229519847|ref|ZP_04409281.1| hypothetical protein VIF_000361 [Vibrio cholerae TM 11079-80]
gi|229343135|gb|EEO08119.1| hypothetical protein VIF_000361 [Vibrio cholerae TM 11079-80]
Length = 236
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE ++K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGIDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ M PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPMDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|422019469|ref|ZP_16366017.1| PLP-binding domain-containing protein [Providencia alcalifaciens
Dmel2]
gi|414103308|gb|EKT64886.1| PLP-binding domain-containing protein [Providencia alcalifaciens
Dmel2]
Length = 230
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +R+ AA R P I ++AVSKTKP I + EAG R FGENYVQE VEK
Sbjct: 7 LSDVTERIRLAATECHRSPQDITLLAVSKTKPCEAIMEAIEAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+DL WHFIG LQSNK + L+A + ++D KIA RLN + PL V
Sbjct: 67 YFSERNDLVWHFIGPLQSNKSR-LVA--EHFDWFHTLDRAKIAQRLNEQ-RPQDKAPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|323493580|ref|ZP_08098701.1| hypothetical protein VIBR0546_04999 [Vibrio brasiliensis LMG 20546]
gi|323312103|gb|EGA65246.1| hypothetical protein VIBR0546_04999 [Vibrio brasiliensis LMG 20546]
Length = 238
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE----IV 95
+ + ++ A ++ R ++++AVSKTKP+ I + +AG FGENYVQE ++
Sbjct: 8 IEQITSQIEVAQQKCGRGRGSVQLLAVSKTKPIEAILEAAQAGQTAFGENYVQEGANKVI 67
Query: 96 EKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
A P+ +LEWHFIG +QSNK + + N A V +VD KIA RLN G +P
Sbjct: 68 HFAQHHPELNLEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAQRLNDQ-RPQGLEP 123
Query: 155 LKVLVQVNTSGE 166
++VL+QVNTSGE
Sbjct: 124 IQVLIQVNTSGE 135
>gi|91781864|ref|YP_557070.1| hypothetical protein Bxe_A3981 [Burkholderia xenovorans LB400]
gi|91685818|gb|ABE29018.1| Protein of unknown function UPF0001 [Burkholderia xenovorans LB400]
Length = 232
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R I ++AVSKT P +R Y AG R FGENYVQE + K
Sbjct: 8 LEAVRQRIATAAHVAGRDTRSIHLLAVSKTFPAEDVRAAYAAGQRAFGENYVQEAITKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D +EWHFIG LQSNK +P+ + V SVD KIA RL+ PL
Sbjct: 68 ALADLRATIEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQ-RPDNLPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|338998827|ref|ZP_08637489.1| hypothetical protein GME_12359 [Halomonas sp. TD01]
gi|338764280|gb|EGP19250.1| hypothetical protein GME_12359 [Halomonas sp. TD01]
Length = 238
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
TD +L +R+ A + + RP D ++AVSKTKP ++IRQ + G R FGENY+
Sbjct: 2 TDIALPESLAQARERLSNALKMAERPLDSATLLAVSKTKPAAMIRQAWHHGQREFGENYL 61
Query: 92 QEIVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVET 149
QE +EK A+L D + WHFIG LQSNK + A N A + SVD KIA RL+
Sbjct: 62 QEALEKQAELTDLDGIVWHFIGPLQSNKTR---AVAENFAWMHSVDRLKIAKRLSEQ-RP 117
Query: 150 MGRKPLKVLVQVNTSGE 166
PL + +QVN S E
Sbjct: 118 EHLPPLNICLQVNISRE 134
>gi|221133769|ref|ZP_03560074.1| hypothetical protein GHTCC_02484 [Glaciecola sp. HTCC2999]
Length = 235
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 6/132 (4%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + +++ ++ A+ + R P ++++AVSKTKP+S + Q Y+AG R FGENYVQE VE
Sbjct: 6 AQNIENILSQITVLAQDADREPASVQLLAVSKTKPISDVIQAYDAGQRHFGENYVQEGVE 65
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
K L DL WHFIG +QSNK K +A S+D KIA RLN + +KP
Sbjct: 66 KVHALAHLSDLVWHFIGPIQSNKSK-FIAEC--FDWCHSIDRLKIAQRLNNQ-RAVDQKP 121
Query: 155 LKVLVQVNTSGE 166
L+V +QVN E
Sbjct: 122 LQVCIQVNIDNE 133
>gi|187922723|ref|YP_001894365.1| alanine racemase domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187713917|gb|ACD15141.1| alanine racemase domain protein [Burkholderia phytofirmans PsJN]
Length = 232
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R + ++AVSKT P +R Y AG R FGENYVQE + K
Sbjct: 8 LEAVQQRIAMAAHVAGRDTRSVHLLAVSKTFPAEDVRAAYAAGQRAFGENYVQEALTKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D LEWHFIG LQSNK +P+ V SVD KIA RL+ PL
Sbjct: 68 ALADLRATLEWHFIGPLQSNKTRPV---AEQFDWVHSVDRLKIAQRLSEQ-RPDNLPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|376260956|ref|YP_005147676.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. BNL1100]
gi|373944950|gb|AEY65871.1| pyridoxal phosphate enzyme, YggS family [Clostridium sp. BNL1100]
Length = 235
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 81/128 (63%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + R+ AAE+S R + I+++AV+KT V IR V E G FGEN VQE++EK
Sbjct: 10 LDDIYSRIKAAAEKSGRKAEDIKLIAVTKTVEVDRIRNVSEYGVPDFGENRVQELLEKYE 69
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
+ + ++WH IG+LQ+NKVK ++ V M+ SVD+ ++A ++ G+K + VL+
Sbjct: 70 KFDESIKWHLIGHLQTNKVKYIIDKV---HMIHSVDSFELAKEIDNRAGKAGKK-MNVLL 125
Query: 160 QVNTSGEE 167
QVN SGEE
Sbjct: 126 QVNVSGEE 133
>gi|294649640|ref|ZP_06727054.1| alanine racemase domain protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824456|gb|EFF83245.1| alanine racemase domain protein [Acinetobacter haemolyticus ATCC
19194]
Length = 228
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 7/127 (5%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ QA + R P ++++AVSKT P +R++Y AG R FGENY+QE + K +L
Sbjct: 11 VLMQIEQACQHVQRDPKSVQLLAVSKTHPSQSLRELYLAGQRSFGENYLQEALGKIEELQ 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRMVETMGRKPLKVLVQ 160
D ++EWHFIG++Q NK K L V VD IA RL N+ +ET +KPL + +Q
Sbjct: 71 DLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRLET--QKPLNICIQ 125
Query: 161 VNTSGEE 167
VN G++
Sbjct: 126 VNIDGQD 132
>gi|294673995|ref|YP_003574611.1| hypothetical protein PRU_1297 [Prevotella ruminicola 23]
gi|294472457|gb|ADE81846.1| conserved hypothetical protein TIGR00044 [Prevotella ruminicola 23]
Length = 224
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VA+SK P I YE G R FGE++ QE+ +K LP D+EWHFIG+LQ+NK
Sbjct: 17 PQGVRLVAISKYHPNEYIEAAYEEGQRVFGESHEQELRQKHQSLPQDIEWHFIGHLQTNK 76
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE--EYGECFIKC 175
VK + P + M+E+VD+ K+ +N+ E GR+ +KVL++++ + E +YG C
Sbjct: 77 VKYI---APYVTMIEAVDSLKLLREINKQAEKCGRR-IKVLLELHIAEEATKYGLTLDAC 132
>gi|241758478|ref|ZP_04756598.1| pyridoxal phosphate enzyme, YggS family [Neisseria flavescens
SK114]
gi|241321381|gb|EER57522.1| pyridoxal phosphate enzyme, YggS family [Neisseria flavescens
SK114]
Length = 231
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
+ V + V QAAE + RP D +++VAVSKT P IR+VY AG R FGENY+QE EK
Sbjct: 9 QDVCRAVEQAAEAAGRPADAVKLVAVSKTFPADDIREVYVAGQRDFGENYIQEWFEKTET 68
Query: 101 LPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D D+ WH IG++QSNK K + V ++D K A RL+ + PL+V
Sbjct: 69 LADLPDIVWHVIGDVQSNKTKFV---AERAHWVHTIDRLKTARRLSEQ-RSSEMPPLQVC 124
Query: 159 VQVNTSGEE 167
++VN + EE
Sbjct: 125 IEVNIAAEE 133
>gi|226479872|emb|CAX73232.1| putative Proline synthetase co-transcribed bacterial homolog
protein [Schistosoma japonicum]
Length = 253
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L S++ R+ +A + S+ R+VAVSK KPV I + Y G R FGEN + + +K+
Sbjct: 5 LHSILNRIEEARKVSTSGQKFCRLVAVSKEKPVQSIIEAYNIGQRHFGENKIVHLYDKSH 64
Query: 99 ----AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ D+ WHFIG +Q+NK+K LAGV NL MVE++D+ A L+ + + P
Sbjct: 65 SPEVVKCCPDIRWHFIGRIQTNKIK-RLAGVNNLFMVETLDSISHAEILDSLWALNHQMP 123
Query: 155 LKVLVQVNTSGE 166
LK+++QVNTSGE
Sbjct: 124 LKIMIQVNTSGE 135
>gi|118581657|ref|YP_902907.1| alanine racemase domain-containing protein [Pelobacter propionicus
DSM 2379]
gi|118504367|gb|ABL00850.1| alanine racemase domain protein [Pelobacter propionicus DSM 2379]
Length = 228
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 8/129 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + AA + R P+ +R+VAVSKT+P + + + AG FGENYVQE+ KA
Sbjct: 7 LAEVREEIRTAALAAGRDPEGVRLVAVSKTRPAADVIDAFRAGQIIFGENYVQELRAKAP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK--V 157
++ +EWHFIG+LQSNKV+ +AG+ ++M+ SVD +A ++R GR L +
Sbjct: 67 EVKKSVEWHFIGHLQSNKVRQ-IAGL--VSMIHSVDRLSLAEEISR---QWGRLSLSCDI 120
Query: 158 LVQVNTSGE 166
LVQVN SGE
Sbjct: 121 LVQVNISGE 129
>gi|398941345|ref|ZP_10669804.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp.
GM41(2012)]
gi|398161814|gb|EJM50034.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp.
GM41(2012)]
Length = 228
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 9/127 (7%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+H AA + R D ++++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VSSRIHAAAVAAKRDADSVQLLAVSKTKPAEALREAYAAGLRDFGENYLQEALSKQLELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D L WHFIG +QSNK + A + A V SVD KIA RL+ R E PL + +
Sbjct: 71 DLPLIWHFIGPIQSNKTR---AIAEHFAWVHSVDRLKIAQRLSEQRPAEL---PPLNICI 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|315041367|ref|XP_003170060.1| YggS family pyridoxal phosphate enzyme [Arthroderma gypseum CBS
118893]
gi|311345094|gb|EFR04297.1| YggS family pyridoxal phosphate enzyme [Arthroderma gypseum CBS
118893]
Length = 296
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 71/122 (58%), Gaps = 15/122 (12%)
Query: 61 IRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
+R+VAVSK KP S I ++ H FGENY+QE++EK+ LP ++ WHFIG LQSNK
Sbjct: 64 VRLVAVSKLKPASDILALHSPPTSHLHFGENYMQELLEKSKALPPEIRWHFIGGLQSNKC 123
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRM-------------VETMGRKPLKVLVQVNTSG 165
L V L VESVD EK A L++ + +PL+V VQVNTSG
Sbjct: 124 VTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKDKDSDADEHANRPLRVFVQVNTSG 183
Query: 166 EE 167
EE
Sbjct: 184 EE 185
>gi|385206841|ref|ZP_10033709.1| pyridoxal phosphate enzyme, YggS family [Burkholderia sp. Ch1-1]
gi|385179179|gb|EIF28455.1| pyridoxal phosphate enzyme, YggS family [Burkholderia sp. Ch1-1]
Length = 232
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R I ++AVSKT P +R Y AG R FGENYVQE + K
Sbjct: 8 LEAVRQRIATAAHVAGRDTRSIHLLAVSKTFPAEDVRAAYGAGQRAFGENYVQEAITKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D +EWHFIG LQSNK +P+ + V SVD KIA RL+ PL
Sbjct: 68 ALADLRATIEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQ-RPDNLPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|365836679|ref|ZP_09378067.1| pyridoxal phosphate enzyme, YggS family [Hafnia alvei ATCC 51873]
gi|364563577|gb|EHM41381.1| pyridoxal phosphate enzyme, YggS family [Hafnia alvei ATCC 51873]
Length = 237
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L +V R+ AA+ R P+ + ++AVSKTKPVS I + AG R FGENYVQE V K
Sbjct: 9 LEAVRSRISAAAQDCGRSPEEVTLLAVSKTKPVSDIEETIAAGQRAFGENYVQEGVSKIQ 68
Query: 98 ---AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
Q D+LEWHFIG LQSNK + L+A + + +VD KIA RL+ +
Sbjct: 69 YFAQTQHADELEWHFIGPLQSNKSR-LVA--EHFDWIHTVDRVKIAQRLSEQ-RPADKAA 124
Query: 155 LKVLVQVNTSGE 166
L VL+Q+N S E
Sbjct: 125 LNVLIQINISDE 136
>gi|392866645|gb|EAS30180.2| YggS family pyridoxal phosphate enzyme [Coccidioides immitis RS]
Length = 280
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 91/167 (54%), Gaps = 25/167 (14%)
Query: 26 MAASAATDGVA-------ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQV 78
M+AS+A + A A+AL + + V +S P +R+VAVSK KP S I +
Sbjct: 1 MSASSAPEPSADMPSPSRASALLANLSSVTSRISAASVPGSSVRLVAVSKLKPASDILAL 60
Query: 79 YE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDN 136
Y H FGENY+QE++EK+ LP ++ WHFIG LQSNK L V L VESVD
Sbjct: 61 YNPPTSHLHFGENYLQELLEKSKILPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDT 120
Query: 137 EKIAGRLNR-------------MVETMGR-KP--LKVLVQVNTSGEE 167
+K A L++ + GR +P L+V VQVNTSGEE
Sbjct: 121 QKKATLLDKGWGERLKNHSAQQQQQQQGRAEPERLRVFVQVNTSGEE 167
>gi|359406919|ref|ZP_09199562.1| pyridoxal phosphate enzyme, YggS family [Prevotella stercorea DSM
18206]
gi|357554417|gb|EHJ36134.1| pyridoxal phosphate enzyme, YggS family [Prevotella stercorea DSM
18206]
Length = 222
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 52 ERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIG 111
E + P +R+VAVSK P +++ Y+AG R FGE+ QE+ K LP D+EWHFIG
Sbjct: 9 EVTDSLPQGVRLVAVSKFHPAEYVKEAYDAGQRVFGESREQELSRKVEVLPKDIEWHFIG 68
Query: 112 NLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YG 169
+LQ+NKVK + P ++M+++VD+ K+ +N+ GR +KVL++++ + EE YG
Sbjct: 69 HLQTNKVKYI---APYISMIDAVDSLKLLREINKQAAAHGR-TIKVLLELHIAEEETKYG 124
Query: 170 ECFIKC 175
C
Sbjct: 125 LSLDAC 130
>gi|261250164|ref|ZP_05942740.1| hypothetical protein VIA_000184 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417953249|ref|ZP_12596296.1| hypothetical protein VIOR3934_09580 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260939280|gb|EEX95266.1| hypothetical protein VIA_000184 [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342817424|gb|EGU52305.1| hypothetical protein VIOR3934_09580 [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 238
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R + ++++AVSKTKP I + AG FGENYVQE +K A
Sbjct: 8 IEQITSQIEAAQQKCGRSRETVQLLAVSKTKPNEAILEAARAGQLAFGENYVQEGADKVA 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ LEWHFIG +QSNK + + N A V ++D KIA RLN G P
Sbjct: 68 HFSEHHPELALEWHFIGPIQSNKSRHV---AENFAWVHTIDRAKIAQRLNDQ-RPAGSAP 123
Query: 155 LKVLVQVNTSGEE 167
++VL+QVNTSGE+
Sbjct: 124 IQVLMQVNTSGEQ 136
>gi|345300764|ref|YP_004830122.1| hypothetical protein Entas_3622 [Enterobacter asburiae LF7a]
gi|345094701|gb|AEN66337.1| protein of unknown function UPF0001 [Enterobacter asburiae LF7a]
Length = 234
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ + ++AVSKTKP S I + AGHR FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRAPEEVTLLAVSKTKPASAIAEAITAGHRAFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ DL+WHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 YFQELGNSDLQWHFIGPLQSNKSR-LVA--EHFDWCHTLDRLRIATRLNEQRPAEL---A 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|375103469|ref|ZP_09749730.1| pyridoxal phosphate enzyme, YggS family [Burkholderiales bacterium
JOSHI_001]
gi|374664200|gb|EHR68985.1| pyridoxal phosphate enzyme, YggS family [Burkholderiales bacterium
JOSHI_001]
Length = 232
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A+ L+ V R+ A +++RP + ++AVSKT +R+ + AG R FGENYVQE ++
Sbjct: 5 ASKLQQVRDRIATACTQAARPVQSVTLLAVSKTFGPEAVREAFAAGQRAFGENYVQEALD 64
Query: 97 KAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK 153
K A L D +EWH IG LQSNK +P+ V SVD KIA RL+ ++
Sbjct: 65 KIAALADLRSQIEWHLIGPLQSNKTRPV---AEAFDWVHSVDRLKIAQRLSEQ-RLAPQR 120
Query: 154 PLKVLVQVNTSGE 166
PL++ +QVN SGE
Sbjct: 121 PLQLCLQVNISGE 133
>gi|114319503|ref|YP_741186.1| hypothetical protein Mlg_0341 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225897|gb|ABI55696.1| Protein of unknown function UPF0001 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 237
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V +R+ A R R P ++++AVSKT+PVS IR AG FGENY+QE ++K
Sbjct: 7 LQVVHERLRAAEHRFGRDPGSVKLLAVSKTQPVSAIRAALAAGQHAFGENYLQEALDKQQ 66
Query: 100 QLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D EWHFIG LQSNK + +AG + +VD KIA RL++ R PL V
Sbjct: 67 ALADTPAEWHFIGALQSNKTRD-VAG--HFDWCHTVDRLKIARRLSQQ-RPEERPPLNVC 122
Query: 159 VQVNTSGE 166
+QVN SGE
Sbjct: 123 IQVNISGE 130
>gi|302338974|ref|YP_003804180.1| alanine racemase domain-containing protein [Spirochaeta smaragdinae
DSM 11293]
gi|301636159|gb|ADK81586.1| alanine racemase domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 234
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
DG+ A + + + +AA ++ R P I+++AV+KT P + Y+AG R FGEN VQ
Sbjct: 5 DGMIAGNIARIQDEIAEAAHKAGRDPGDIQLMAVTKTHPFEDVLAAYQAGIRLFGENRVQ 64
Query: 93 EIVEK-AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
E V K LP D++ H IG+LQSNKVK + VP + VES+D A LN+ + G
Sbjct: 65 EAVGKYTLPLPADMKLHMIGHLQSNKVKQI---VPFVQCVESIDKVATAEELNKRAQVSG 121
Query: 152 RKPLKVLVQVNTSGE 166
K + ++ +VNTSGE
Sbjct: 122 -KSIDIMFEVNTSGE 135
>gi|375144328|ref|YP_005006769.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361058374|gb|AEV97365.1| protein of unknown function UPF0001 [Niastella koreensis GR20-10]
Length = 225
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
++ +VAVSKTKPVS I+++Y+ G R FGENYVQE+ EK +P+D+ WHFIG+LQSNKVK
Sbjct: 19 QVTLVAVSKTKPVSDIQELYDLGQRDFGENYVQELAEKQLLMPNDIRWHFIGHLQSNKVK 78
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+ P + ++ VD+ K+ +++ + R + L+QV+ + EE
Sbjct: 79 YI---APFVHLIHGVDSYKLLLEIDKQAKKADR-IINCLLQVHVAQEE 122
>gi|354558733|ref|ZP_08977987.1| protein of unknown function UPF0001 [Desulfitobacterium
metallireducens DSM 15288]
gi|353545795|gb|EHC15245.1| protein of unknown function UPF0001 [Desulfitobacterium
metallireducens DSM 15288]
Length = 236
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 14/130 (10%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + QR+ +AAE +SR I+++AVSKT V +R+ Y+AG R F EN VQE +EKA
Sbjct: 7 LKQIYQRMGKAAEGASRGLQEIKLLAVSKTMKVEAVREAYQAGQRVFAENRVQEWLEKAP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMG-RKPL- 155
LP D EWH IG LQ+NKVK L N+ ++ S+D RLN + +E G R+ +
Sbjct: 67 ALPKDCEWHLIGRLQTNKVKYL---NDNITLIHSLD------RLNLLKTLEEQGTRRDII 117
Query: 156 -KVLVQVNTS 164
VLV+VNT+
Sbjct: 118 WPVLVEVNTA 127
>gi|419952587|ref|ZP_14468734.1| TIM-barrel fold family protein [Pseudomonas stutzeri TS44]
gi|387970632|gb|EIK54910.1| TIM-barrel fold family protein [Pseudomonas stutzeri TS44]
Length = 229
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R P + ++AVSKT+P S +R+ + AG FGENY+QE +EK A L
Sbjct: 11 VAARIREAAQAAQRDPATVGLLAVSKTQPASAVREAFAAGLGDFGENYLQEALEKQALLA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK K + + A V SVD KIA RL+ PL V +QV
Sbjct: 71 DLPLTWHFIGPIQSNKTKAI---AEHFAWVHSVDRLKIAERLSDQ-RPAHLPPLNVCLQV 126
Query: 162 NTSGEE 167
N S E+
Sbjct: 127 NVSDEQ 132
>gi|421465927|ref|ZP_15914614.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens WC-A-157]
gi|400204194|gb|EJO35179.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens WC-A-157]
Length = 231
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 6/127 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ +A+ ++ R D ++++AVSKT V+R++Y+AG R FGENY+QE +EK L
Sbjct: 11 VLAQIQEASHKAGRADDAVQLLAVSKTHSAVVLREMYQAGQRSFGENYLQEALEKIHSLQ 70
Query: 103 D--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
D D+EWHFIG++Q NK K L N V VD IA RL+ R L + +Q
Sbjct: 71 DLNDIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERLSAQ-RPEQRAALNICIQ 126
Query: 161 VNTSGEE 167
VN G+E
Sbjct: 127 VNIDGQE 133
>gi|289209575|ref|YP_003461641.1| alanine racemase domain-containing protein [Thioalkalivibrio sp.
K90mix]
gi|288945206|gb|ADC72905.1| alanine racemase domain protein [Thioalkalivibrio sp. K90mix]
Length = 237
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 11/134 (8%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A R+V +R+ A E++ R P +R++AVSKT+ IR ++ G FGENYVQE+++K
Sbjct: 7 AFRAVRERIVHACEQAGRDPGSVRLLAVSKTRTADDIRALHALGQTAFGENYVQELIDKF 66
Query: 99 AQL-----PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGR 152
L P LEWH+IG LQSNK +P+ V ++D E+IA RL+ + E +
Sbjct: 67 DALETGPNPLGLEWHYIGALQSNKTRPV---AERAHWVHTIDRERIARRLSEQRPEHL-- 121
Query: 153 KPLKVLVQVNTSGE 166
PL+V +Q+N SGE
Sbjct: 122 PPLQVCLQINVSGE 135
>gi|399002123|ref|ZP_10704819.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM18]
gi|398125867|gb|EJM15330.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM18]
Length = 232
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+H AA + R I+++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VSSRIHAAALAAQRDEHSIQLLAVSKTKPAEALREAYAAGIRDFGENYLQEALGKQLELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + A + A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLIWHFIGPIQSNKTR---AIAEHFAWVHSVDRLKIAQRLSEQ-RPADLPPLDICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|189204762|ref|XP_001938716.1| alanine racemase family protein (ISS) [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985815|gb|EDU51303.1| alanine racemase family protein (ISS) [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 269
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 18/141 (12%)
Query: 45 QRVHQAAER----------SSRPPDRIRIVAVSKTKPVSVIRQVY---EAGHRCFGENYV 91
QR Q AE +S+ ++R++AVSK KP + I ++ + H FGENYV
Sbjct: 10 QRAKQLAENISTISSRIKAASKDNKQVRLIAVSKLKPANDILALHQQPDPTHTHFGENYV 69
Query: 92 QEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
QE++EK+ LP + WH IG LQSNK K L +PNL V SVD+EK A L + + +
Sbjct: 70 QELIEKSKLLPRTIRWHMIGGLQSNKCKQLAEQIPNLWCVSSVDSEKKANELEKGRKALL 129
Query: 152 RK-----PLKVLVQVNTSGEE 167
K L+V VQVNTSGE+
Sbjct: 130 EKDNSAEKLRVKVQVNTSGEK 150
>gi|153808274|ref|ZP_01960942.1| hypothetical protein BACCAC_02562 [Bacteroides caccae ATCC 43185]
gi|423219018|ref|ZP_17205514.1| YggS family pyridoxal phosphate enzyme [Bacteroides caccae
CL03T12C61]
gi|149129177|gb|EDM20393.1| pyridoxal phosphate enzyme, YggS family [Bacteroides caccae ATCC
43185]
gi|392625784|gb|EIY19840.1| YggS family pyridoxal phosphate enzyme [Bacteroides caccae
CL03T12C61]
Length = 222
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQSNK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQSNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDTYKLLAEVNKQAVKAGR-IINCLLQIHVAQEE 120
>gi|421857446|ref|ZP_16289781.1| hypothetical protein ACRAD_52_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403187094|dbj|GAB75982.1| hypothetical protein ACRAD_52_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 231
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 6/127 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ +A+ ++ R D ++++AVSKT V+R++Y+AG R FGENY+QE +EK L
Sbjct: 11 VLAQIQEASHKAGRADDAVQLLAVSKTHSAVVLREMYQAGQRSFGENYLQEALEKIHSLQ 70
Query: 103 D--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
D D+EWHFIG++Q NK K L N V VD IA RL+ R L + +Q
Sbjct: 71 DLNDIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERLSAQ-RPEQRAALNICIQ 126
Query: 161 VNTSGEE 167
VN G+E
Sbjct: 127 VNIDGQE 133
>gi|336118974|ref|YP_004573746.1| hypothetical protein MLP_33290 [Microlunatus phosphovorus NM-1]
gi|334686758|dbj|BAK36343.1| hypothetical protein MLP_33290 [Microlunatus phosphovorus NM-1]
Length = 250
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +RV +A + R P ++R++ VSKTKP S IR+ Y+AG R FGEN VQE V KA
Sbjct: 16 LAEVRRRVDEACVAAGRDPSQVRLLPVSKTKPPSAIREAYDAGVRLFGENKVQEAVAKAE 75
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D DL W IG+LQ+NK + + A ++D+ ++A LNR + + R L V
Sbjct: 76 VFADVPDLRWAVIGHLQTNKARQVAAVADEF---HALDSLRVAEALNRRLHMLDRT-LDV 131
Query: 158 LVQVNTSGEE 167
VQVN+SGEE
Sbjct: 132 FVQVNSSGEE 141
>gi|237798174|ref|ZP_04586635.1| hypothetical protein POR16_04969 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021026|gb|EGI01083.1| hypothetical protein POR16_04969 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 228
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA ++R P + ++AVSKTKP S +R+ Y G FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAAHAANRDPASVGLLAVSKTKPASDLREAYTEGLLHFGENYLQEALG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + A N A V SVD KIA RL+ +PL
Sbjct: 65 KQLELTDLPLCWHFIGPIQSNKTR---AIAENFAWVHSVDRLKIAQRLSEQ-RPDALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|224535468|ref|ZP_03676007.1| hypothetical protein BACCELL_00331 [Bacteroides cellulosilyticus
DSM 14838]
gi|423222848|ref|ZP_17209318.1| YggS family pyridoxal phosphate enzyme [Bacteroides
cellulosilyticus CL02T12C19]
gi|224522934|gb|EEF92039.1| hypothetical protein BACCELL_00331 [Bacteroides cellulosilyticus
DSM 14838]
gi|392640786|gb|EIY34578.1| YggS family pyridoxal phosphate enzyme [Bacteroides
cellulosilyticus CL02T12C19]
Length = 222
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 74/123 (60%), Gaps = 10/123 (8%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S PD +R+VAVSK P I + Y G R FGE+ VQE+ K LP D+EWHFIG+LQ
Sbjct: 12 SELPDGVRLVAVSKFHPNEAIEEAYRTGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE------Y 168
+NK+K + VP +A++ +D+ K+ +N+ G K + L+Q++ + EE +
Sbjct: 72 TNKIKFI---VPYVALIHGIDSYKLLVEVNKQAAKAG-KVVNCLLQLHIAEEETKFGFSF 127
Query: 169 GEC 171
GEC
Sbjct: 128 GEC 130
>gi|77461540|ref|YP_351047.1| hypothetical protein Pfl01_5319 [Pseudomonas fluorescens Pf0-1]
gi|77385543|gb|ABA77056.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 228
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+H A + R + ++++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VSSRIHAATAAAGRDENSVQLLAVSKTKPSEALREAYAAGLRDFGENYLQEALGKQLELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + + A V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLIWHFIGPIQSNKTRSI---AEHFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|345513155|ref|ZP_08792678.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
5_1_36/D4]
gi|229434767|gb|EEO44844.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
5_1_36/D4]
Length = 222
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P +R+VAVSK P + + Y AG R FGE++VQE+ +K LP D+EWHFIG+LQ
Sbjct: 12 SELPTEVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NKVK + P +AM+ ++D+ K+ +N+ + R + L+Q++ + EE +G F
Sbjct: 72 TNKVKYM---APYVAMIHAIDSYKLLVEVNKQASKVHR-VIPCLLQIHIAQEETKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|225378092|ref|ZP_03755313.1| hypothetical protein ROSEINA2194_03752 [Roseburia inulinivorans DSM
16841]
gi|225210093|gb|EEG92447.1| hypothetical protein ROSEINA2194_03752 [Roseburia inulinivorans DSM
16841]
Length = 231
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 87/131 (66%), Gaps = 10/131 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V +RV +A +R+ R + + ++AVSKTKP+ +++++Y+ R FGEN VQE+ +K
Sbjct: 6 LKNVEERVQEACDRAGRKREEVTLIAVSKTKPIEMLQEIYDENIRDFGENKVQELCDKIE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP---LK 156
++P D++WH IG+LQ NKVK ++ V A++ SVD+ ++A +N +K +
Sbjct: 66 KMPKDIKWHMIGHLQRNKVKYIVGQV---ALIHSVDSYRLAEEIN----IQAKKKNIIVP 118
Query: 157 VLVQVNTSGEE 167
+LV+VN + EE
Sbjct: 119 ILVEVNIAHEE 129
>gi|291460492|ref|ZP_06599882.1| pyridoxal phosphate enzyme, YggS family [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291416864|gb|EFE90583.1| pyridoxal phosphate enzyme, YggS family [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 230
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 78/129 (60%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + +R+ A ER+ R + + ++AVSKTKPVS IR+ G RCFGEN VQE+ +K A
Sbjct: 8 LERISERIFAACERAGRKRESVELIAVSKTKPVSDIREAMRLGIRCFGENRVQELRQKTA 67
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLA-MVESVDNEKIAGRLNRMVETMGRKPLKVL 158
++P+ L WH IG LQ NKVK L P + M+ SVD+ +A + + + G + VL
Sbjct: 68 EIPEKLHWHMIGVLQKNKVKYL----PGMVEMIHSVDSLGLAQEIEKECKKHG-ISMDVL 122
Query: 159 VQVNTSGEE 167
+VN EE
Sbjct: 123 CEVNVGREE 131
>gi|166031848|ref|ZP_02234677.1| hypothetical protein DORFOR_01549 [Dorea formicigenerans ATCC
27755]
gi|166028301|gb|EDR47058.1| pyridoxal phosphate enzyme, YggS family [Dorea formicigenerans ATCC
27755]
Length = 244
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 6/135 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V Q++ A ERS R + ++AVSKTKP ++++ Y+ G R FGEN VQEI++K+
Sbjct: 16 LENVEQKIQAACERSGRDRSEVTLIAVSKTKPAEMVQEAYDLGIRLFGENKVQEIMDKSE 75
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL-KVL 158
LP D+ WH IG+LQ NK+K ++ V ++ SVD+ ++A + + E + + KVL
Sbjct: 76 VLPADIHWHMIGHLQRNKIKYIIDKVD---LIHSVDSLRLAEAIEK--EAAKKHVIAKVL 130
Query: 159 VQVNTSGEEYGECFI 173
++VN EE F+
Sbjct: 131 IEVNVGREESKFGFL 145
>gi|405373494|ref|ZP_11028267.1| Hypothetical protein YggS [Chondromyces apiculatus DSM 436]
gi|397087753|gb|EJJ18783.1| Hypothetical protein YggS [Myxococcus sp. (contaminant ex DSM 436)]
Length = 228
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 32 TDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYV 91
+DG A L +V +R+ A R+ RP + + +VAVSK KP ++IR+ Y AG R FGENY
Sbjct: 2 SDGSVAERLAAVRERLAAACARAGRPVESVTLVAVSKLKPAALIREAYAAGQRDFGENYA 61
Query: 92 QEIVEKAAQLP--DDLEWHFIGNLQSNKVKPL--LAGVPNLAMVESVDNEKIAGRLNRMV 147
QE+ +KA +L D L WH IG LQ+NKVK + +AG ++D ++A L++
Sbjct: 62 QELRDKAVELADLDGLRWHAIGALQTNKVKYVARVAGA-----FHALDRLEVARELSKRR 116
Query: 148 ETMGRKPLKVLVQVNTSGE 166
E G PL V V+VN E
Sbjct: 117 E--GAPPLPVYVEVNVGAE 133
>gi|375132071|ref|YP_004994171.1| hypothetical protein [Vibrio furnissii NCTC 11218]
gi|315181245|gb|ADT88159.1| hypothetical protein vfu_A03051 [Vibrio furnissii NCTC 11218]
Length = 235
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L + ++ A ++ R ++++AVSKTKPV I + EAG R FGENYVQE +K
Sbjct: 8 LEHITSQIENAQQKCGRSRSSVQLLAVSKTKPVEAILEAAEAGQRAFGENYVQEGCDKVQ 67
Query: 98 --AAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
A P+ DLEWHFIG LQSNK + L+A + + ++D KIA RL+ P
Sbjct: 68 FFAEHHPELDLEWHFIGPLQSNKTR-LIA--EHFDWMHTIDRAKIAQRLSEQ-RPAHLPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|322699267|gb|EFY91030.1| alanine racemase family protein (ISS) [Metarhizium acridum CQMa
102]
Length = 287
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
++R+VAVSK KPV+ I +++A HR FGENY QE+ +KA LP ++WHFIG LQS
Sbjct: 61 QVRLVAVSKLKPVNDILALHQAPASHRHFGENYTQELTQKAQLLPKTVQWHFIGGLQSGH 120
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNR-----MVETMGRKPLKVLVQVNTSGEE 167
K LA +PNL V SVD K A LN + L V VQVNTSGEE
Sbjct: 121 CK-TLAKIPNLFCVSSVDTLKKANLLNTARGALLASDPSLPKLSVHVQVNTSGEE 174
>gi|395800962|ref|ZP_10480233.1| alanine racemase [Flavobacterium sp. F52]
gi|395436829|gb|EJG02752.1| alanine racemase [Flavobacterium sp. F52]
Length = 218
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ + +VAVSKTKPVS + Q YEAG R FGEN +QE+ EK Q+P D++WH IG++QSNK
Sbjct: 15 PEHVTLVAVSKTKPVSDLMQAYEAGQRIFGENKIQEMTEKWEQMPKDIQWHMIGHVQSNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + P + ++ VD+ K+ +N+ R + L+Q+ + EE
Sbjct: 75 VKFM---APYVTLIHGVDSLKLLQEINKQALKNNR-TIDCLLQIYIAEEE 120
>gi|145300499|ref|YP_001143340.1| hypothetical protein ASA_3631 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362892|ref|ZP_12963510.1| hypothetical protein IYQ_21373 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853271|gb|ABO91592.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356685898|gb|EHI50517.1| hypothetical protein IYQ_21373 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 233
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V +R+ QAA ++ R D I ++AVSKTKP+ IR+ Y AG R GE+Y QE
Sbjct: 5 AQHLLQVKERIVQAARQADRCVDHINLLAVSKTKPLEAIREAYAAGQRRLGESYAQEAAT 64
Query: 97 KAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
K L D+EWHFIG LQSNK + + V+SVD +K+ RLN G
Sbjct: 65 KIDTLRKQAVCTDIEWHFIGPLQSNKSRLV---AERFDWVQSVDRDKLIERLNNQ-RPAG 120
Query: 152 RKPLKVLVQVNTSGE 166
PL + +Q+N SGE
Sbjct: 121 LAPLNICLQINISGE 135
>gi|34541703|ref|NP_906182.1| hypothetical protein PG2126 [Porphyromonas gingivalis W83]
gi|419969979|ref|ZP_14485496.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas gingivalis
W50]
gi|34398021|gb|AAQ67081.1| conserved hypothetical protein TIGR00044 [Porphyromonas gingivalis
W83]
gi|392611798|gb|EIW94523.1| pyridoxal phosphate enzyme, YggS family [Porphyromonas gingivalis
W50]
Length = 224
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+ AVSK PV + + YEAG R F E+ VQE++ K +PDD+EWHFIG LQ+NK
Sbjct: 16 PQGVRLAAVSKFHPVEELMEAYEAGQRVFAESRVQELMSKVEAMPDDVEWHFIGPLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
VK + VP ++M++SV + K+ ++R +GR + VL++V+ + E+ F
Sbjct: 76 VKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLEVHIASEDTKSGF 126
>gi|188994039|ref|YP_001928291.1| hypothetical protein PGN_0175 [Porphyromonas gingivalis ATCC 33277]
gi|118200279|dbj|BAF37085.1| hypothetical protein [Porphyromonas gingivalis]
gi|188593719|dbj|BAG32694.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 224
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+ AVSK PV + + YEAG R F E+ VQE++ K +PDD+EWHFIG LQ+NK
Sbjct: 16 PQGVRLAAVSKFHPVEELMEAYEAGQRVFAESRVQELMSKVEAMPDDVEWHFIGPLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
VK + VP ++M++SV + K+ ++R +GR + VL++V+ + E+ F
Sbjct: 76 VKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLEVHIASEDTKSGF 126
>gi|114564024|ref|YP_751538.1| hypothetical protein Sfri_2860 [Shewanella frigidimarina NCIMB 400]
gi|114335317|gb|ABI72699.1| Protein of unknown function UPF0001 [Shewanella frigidimarina NCIMB
400]
Length = 228
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 9/126 (7%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE----IVEKAAQL 101
R++QAA++ SR I ++AVSKTKP+S I Y+AG R FGENYVQE I A
Sbjct: 14 RINQAAQKCSRSSAEISLLAVSKTKPISDIVAAYQAGQRLFGENYVQEGETKINALQADY 73
Query: 102 PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
P D+EWHFIG LQSNK K + + + ++ KIA RL+ + ++PL V +QV
Sbjct: 74 P-DIEWHFIGPLQSNKTKIV---AEHFDWMHTLSRAKIAQRLHEQ-RPINKQPLNVCIQV 128
Query: 162 NTSGEE 167
N S E+
Sbjct: 129 NISQEQ 134
>gi|423215807|ref|ZP_17202333.1| YggS family pyridoxal phosphate enzyme [Bacteroides xylanisolvens
CL03T12C04]
gi|392691450|gb|EIY84695.1| YggS family pyridoxal phosphate enzyme [Bacteroides xylanisolvens
CL03T12C04]
Length = 222
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D+ K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDSYKLLAEVNKQAVKAGR-TVNCLLQIHVAQEE 120
>gi|343498160|ref|ZP_08736199.1| hypothetical protein VITU9109_25425 [Vibrio tubiashii ATCC 19109]
gi|418479517|ref|ZP_13048597.1| hypothetical protein VT1337_13862 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342824601|gb|EGU59136.1| hypothetical protein VITU9109_25425 [Vibrio tubiashii ATCC 19109]
gi|384572857|gb|EIF03363.1| hypothetical protein VT1337_13862 [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 238
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 11/134 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R D ++++AVSKTKPV I + +AG FGENYVQE K
Sbjct: 8 IEQITSQIEGAQQKCGRGRDTVQLLAVSKTKPVEAILEAAQAGQVSFGENYVQEGANKVE 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
+ +LEWHFIG +QSNK + + N A V +VD KIA RLN + + M
Sbjct: 68 YFAEHHPQLELEWHFIGPIQSNKSRHV---AENFAWVHTVDRAKIAKRLNEQRPDDMA-- 122
Query: 154 PLKVLVQVNTSGEE 167
P++VL+QVNTSGE+
Sbjct: 123 PIQVLIQVNTSGED 136
>gi|389575748|ref|ZP_10165776.1| pyridoxal phosphate enzyme, YggS family [Eubacterium cellulosolvens
6]
gi|389311233|gb|EIM56166.1| pyridoxal phosphate enzyme, YggS family [Eubacterium cellulosolvens
6]
Length = 230
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ + A ER+ R + ++AVSKTKP S I ++Y+ G R FGENY+QE+ EK LP
Sbjct: 9 VLGNIRSACERAGRDASEVTLIAVSKTKPESDIMELYDHGVRDFGENYIQELREKHEHLP 68
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D+ WH IG+LQ NKVK + V M+ +VD ++A + + R + VL++VN
Sbjct: 69 SDIRWHMIGHLQRNKVKYIAEYV---TMIHAVDTLELAKTIEKEAAKHDR-VIPVLIEVN 124
Query: 163 TSGEE 167
+GEE
Sbjct: 125 VAGEE 129
>gi|295087674|emb|CBK69197.1| pyridoxal phosphate enzyme, YggS family [Bacteroides xylanisolvens
XB1A]
Length = 222
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D+ K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDSYKLLAEVNKQAVKAGR-TVNCLLQIHVAQEE 120
>gi|262408826|ref|ZP_06085371.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294648180|ref|ZP_06725720.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CC
2a]
gi|294810758|ref|ZP_06769406.1| pyridoxal phosphate enzyme, YggS family [Bacteroides xylanisolvens
SD CC 1b]
gi|298484090|ref|ZP_07002258.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. D22]
gi|336404970|ref|ZP_08585656.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_30]
gi|345508881|ref|ZP_08788500.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D1]
gi|229447145|gb|EEO52936.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D1]
gi|262353037|gb|EEZ02132.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292636455|gb|EFF54933.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CC
2a]
gi|294442091|gb|EFG10910.1| pyridoxal phosphate enzyme, YggS family [Bacteroides xylanisolvens
SD CC 1b]
gi|298269771|gb|EFI11364.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. D22]
gi|335939642|gb|EGN01515.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_30]
Length = 222
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D+ K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDSYKLLAEVNKQAVKAGR-TVNCLLQIHVAQEE 120
>gi|410447113|ref|ZP_11301215.1| pyridoxal phosphate enzyme, YggS family [SAR86 cluster bacterium
SAR86E]
gi|409980100|gb|EKO36852.1| pyridoxal phosphate enzyme, YggS family [SAR86 cluster bacterium
SAR86E]
Length = 228
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L + ++ + ++ R D I++VAVSK + V VI++ Y G FGENY QE+ E
Sbjct: 6 ADRLIDISSKIQNSCYQAQRAEDEIKLVAVSKLQSVEVIKEAYSLGINNFGENYAQELAE 65
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
K++ P+++ WHFIG +QSNK L+A + V S+D EK+A +LN +E G+K +
Sbjct: 66 KSSTCPNNIIWHFIGPIQSNKT-SLIA--KHAQWVHSIDREKVAMKLNNALELEGKK-IH 121
Query: 157 VLVQVNTSGEE 167
L+QVN EE
Sbjct: 122 ALIQVNIDREE 132
>gi|343429427|emb|CBQ73000.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 956
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 74/111 (66%), Gaps = 6/111 (5%)
Query: 62 RIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
R+VA+SK P S I + + G FGENYVQE+V+KA LP ++ WHF+G LQSNK K
Sbjct: 218 RLVAISKLHPPSAILAAHKQVGQLHFGENYVQEMVDKAKVLPKEIRWHFVGGLQSNKGK- 276
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMG----RKPLKVLVQVNTSGEE 167
LLA + NL ++E++D+ K A L + + + +PL+V +QVNTSGE+
Sbjct: 277 LLASISNLYLLETLDSVKAANVLQKALASPDAVKRDEPLRVYLQVNTSGED 327
>gi|334147087|ref|YP_004510016.1| hypothetical protein PGTDC60_1295 [Porphyromonas gingivalis TDC60]
gi|333804243|dbj|BAK25450.1| hypothetical protein PGTDC60_1295 [Porphyromonas gingivalis TDC60]
Length = 224
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+ AVSK PV + + YEAG R F E+ VQE++ K +PDD+EWHFIG LQ+NK
Sbjct: 16 PQGVRLAAVSKFHPVEELMEAYEAGQRVFAESRVQELMSKVEAMPDDVEWHFIGPLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
VK + VP ++M++SV + K+ ++R +GR + VL++V+ + E+ F
Sbjct: 76 VKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLEVHIASEDTKSGF 126
>gi|374366177|ref|ZP_09624260.1| type IV pilus twitching motility protein PilT [Cupriavidus
basilensis OR16]
gi|373102302|gb|EHP43340.1| type IV pilus twitching motility protein PilT [Cupriavidus
basilensis OR16]
Length = 242
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP---DDLEWHFIG 111
RP + ++AVSKT P + ++ ++AG R FGENYVQE V+K AQL D L WHFIG
Sbjct: 23 GRPAGEVTLLAVSKTFPATAVQAAFDAGQRAFGENYVQEGVDKIAQLAGLRDQLSWHFIG 82
Query: 112 NLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
LQSNK + A V ++D +IA RL+ +G PL+V +QVN SGE
Sbjct: 83 PLQSNKTR---AVAEQFDWVHAIDRLRIAERLSAQ-RPVGMAPLQVCLQVNISGE 133
>gi|383934570|ref|ZP_09988011.1| UPF0001 protein [Rheinheimera nanhaiensis E407-8]
gi|383704542|dbj|GAB58102.1| UPF0001 protein [Rheinheimera nanhaiensis E407-8]
Length = 223
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 8/109 (7%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKV 118
+ ++AVSKTKP + + Y+AG R FGENY QE+ +KA +L D DL WHFIG LQSNK
Sbjct: 28 VALIAVSKTKPAAQVLAAYQAGQRQFGENYPQELADKATELADCRDLHWHFIGPLQSNKT 87
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLKVLVQVNTSGE 166
K L+A + + V S+D KIA RLN + ++GR LKVL+Q+N S E
Sbjct: 88 K-LVA--QHASWVHSIDRLKIAQRLNDQRPASLGR--LKVLLQINISAE 131
>gi|323524799|ref|YP_004226952.1| alanine racemase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323381801|gb|ADX53892.1| alanine racemase domain protein [Burkholderia sp. CCGE1001]
Length = 232
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R I ++AVSKT P +R + AG R FGENYVQE + K
Sbjct: 8 LEAVQQRIAMAAHVAGRDARSIALLAVSKTFPAEDVRAAHAAGQRAFGENYVQEALTKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D LEWHFIG LQSNK +P+ + V SVD KIA RL+ PL
Sbjct: 68 ALADLRASLEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQ-RPDALPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|118200267|dbj|BAF37074.1| hypothetical protein [Porphyromonas gingivalis]
Length = 224
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+ AVSK PV + + YEAG R F E+ VQE++ K +PDD+EWHFIG LQ+NK
Sbjct: 16 PQGVRLAAVSKFHPVEELMEAYEAGQRVFAESRVQELMSKVEAMPDDVEWHFIGPLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECF 172
VK + VP ++M++SV + K+ ++R +GR + VL++V+ + E+ F
Sbjct: 76 VKYI---VPFISMIQSVSSLKLFDEISRQASKVGRT-VPVLLEVHIASEDTKSGF 126
>gi|374621048|ref|ZP_09693582.1| pyridoxal phosphate enzyme, YggS family [gamma proteobacterium
HIMB55]
gi|374304275|gb|EHQ58459.1| pyridoxal phosphate enzyme, YggS family [gamma proteobacterium
HIMB55]
Length = 230
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +A + + R PD ++++AVSKTK I+ VY+ G R FGENYV E +EK + L D
Sbjct: 16 RLSKAIDAAQRAPDSVKLIAVSKTKSAEAIKAVYDTGQRDFGENYVSEAIEKMSALESLD 75
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
+ WHF+G LQSNK + + A N + SVD KIA RLN PL V +QVN
Sbjct: 76 ICWHFLGPLQSNKTRLVAA---NFDWIHSVDRVKIAKRLNEQ-RPDALPPLNVCLQVNIP 131
Query: 165 GE 166
E
Sbjct: 132 AE 133
>gi|389580186|ref|ZP_10170213.1| pyridoxal phosphate enzyme, YggS family [Desulfobacter postgatei
2ac9]
gi|389401821|gb|EIM64043.1| pyridoxal phosphate enzyme, YggS family [Desulfobacter postgatei
2ac9]
Length = 229
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQ----AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIV 95
++S I+++H AA++S + R+ ++AVSK KP +I++ +AGHR FGENY+QE +
Sbjct: 3 IQSNIKKIHDDIRAAAQKSGQDASRVTLIAVSKRKPPEMIQEAIDAGHRDFGENYIQEAM 62
Query: 96 EKAAQLP-DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
EK L WHFIG+LQSNK K V ++ +VD K+A +NR + +G K
Sbjct: 63 EKIDLLGRKSATWHFIGHLQSNKAK---FAVKYFDLIHTVDTVKLAQEINRQAQKIG-KI 118
Query: 155 LKVLVQVNTSGE 166
K+L+QVN S E
Sbjct: 119 QKILLQVNISRE 130
>gi|149192339|ref|ZP_01870544.1| FkuA [Vibrio shilonii AK1]
gi|148833817|gb|EDL50849.1| FkuA [Vibrio shilonii AK1]
Length = 210
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 9/111 (8%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-----DLEWHFIGNLQS 115
++++AVSKTKP+ I +AG R FGENYVQE V K + D+EWHFIG +QS
Sbjct: 3 VQLLAVSKTKPIEAILDACQAGQRRFGENYVQEGVSKVVHFNEQHGDIDIEWHFIGPIQS 62
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
NK +P+ + V +VD KIA RLN G KP++VL+QVNTS E
Sbjct: 63 NKTRPV---AEHFDWVHTVDRAKIAQRLNDQ-RPQGMKPIQVLIQVNTSSE 109
>gi|387812897|ref|YP_005428374.1| hypothetical protein MARHY0451 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381337904|emb|CCG93951.1| conserved hypothetical protein, putative enzyme with PLP-binding
domain, perhaps involved in proline biosynthesis
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 237
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 82/134 (61%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + SV +R+ +A ++ R P +R++AVSKT+P ++ +EAG FGENY+QE ++
Sbjct: 5 ADNIGSVTRRIQKATLQAGREPGSVRLLAVSKTRPAEDLKAAFEAGQIAFGENYLQEALD 64
Query: 97 KAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K L D +EWHFIG +QSNK + + A V SVD KIA RL+ + ET+
Sbjct: 65 KMQALSDIEGIEWHFIGPIQSNKTRQIAEA---FAWVHSVDRLKIARRLSEQRPETL--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL + +QVN + EE
Sbjct: 120 PLNICLQVNINDEE 133
>gi|332531595|ref|ZP_08407492.1| alanine racemase domain protein [Hylemonella gracilis ATCC 19624]
gi|332038958|gb|EGI75387.1| alanine racemase domain protein [Hylemonella gracilis ATCC 19624]
Length = 255
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 9/143 (6%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC 85
M+ S+ + ++ALR+V R++ A + + R P +R++AVSKT +R ++AG
Sbjct: 1 MSDSSFDNSAFSSALRAVQARINAACDAAGRDPASVRLLAVSKTFGPEAVRAAHQAGLTA 60
Query: 86 FGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN 144
FGENY+QE V K A L D LEWH IG +QSNK +P+ + A ++VD KIA RL+
Sbjct: 61 FGENYIQEAVAKTAALADLPLEWHCIGPIQSNKTRPV---AEHFAWAQTVDRFKIAQRLS 117
Query: 145 --RMVETMGRKPLKVLVQVNTSG 165
R E PL++ +QVN G
Sbjct: 118 EQRPAEL---PPLQICLQVNVDG 137
>gi|425747081|ref|ZP_18865099.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-323]
gi|425484241|gb|EKU50650.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-323]
Length = 230
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
++V+ ++ A ++ R P ++++AVSKT P S +R +Y G RCFGENY+QE +EK +
Sbjct: 9 QTVLNQIEHACQQVQRDPATVQLLAVSKTHPASSLRDMYAVGQRCFGENYLQEALEKIEE 68
Query: 101 LPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLKVL 158
L D ++EWHFIG++Q NK K L V VD IA RL+ + +E+ + PL +
Sbjct: 69 LKDLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSGQRLES--QAPLNIC 123
Query: 159 VQVNTSGE 166
+QVN G+
Sbjct: 124 LQVNIDGQ 131
>gi|160882640|ref|ZP_02063643.1| hypothetical protein BACOVA_00593 [Bacteroides ovatus ATCC 8483]
gi|237718405|ref|ZP_04548886.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|299149060|ref|ZP_07042122.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 3_1_23]
gi|336414048|ref|ZP_08594395.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
3_8_47FAA]
gi|383113848|ref|ZP_09934616.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D2]
gi|423289192|ref|ZP_17268042.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL02T12C04]
gi|423298481|ref|ZP_17276538.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL03T12C18]
gi|156111955|gb|EDO13700.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus ATCC
8483]
gi|229452338|gb|EEO58129.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298513821|gb|EFI37708.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 3_1_23]
gi|313696000|gb|EFS32835.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. D2]
gi|335934197|gb|EGM96194.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
3_8_47FAA]
gi|392663022|gb|EIY56576.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL03T12C18]
gi|392667888|gb|EIY61393.1| YggS family pyridoxal phosphate enzyme [Bacteroides ovatus
CL02T12C04]
Length = 222
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D+ K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDSYKLLAEVNKQAVKAGR-TVNCLLQIHVAQEE 120
>gi|51597523|ref|YP_071714.1| hypothetical protein YPTB3213 [Yersinia pseudotuberculosis IP
32953]
gi|186896646|ref|YP_001873758.1| alanine racemase domain-containing protein [Yersinia
pseudotuberculosis PB1/+]
gi|51590805|emb|CAH22451.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|186699672|gb|ACC90301.1| alanine racemase domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 232
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V R+ AA R P+ + ++AVSKTKPV+ I + AG FGENYVQE V+K
Sbjct: 8 LQDVRARIATAAHNCGRSPEEVTLLAVSKTKPVAAIEKAIAAGQYAFGENYVQEGVDKIH 67
Query: 100 QLPDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D+ LEWHFIG LQSNK + L+A N A +VD KIA RL+ L V
Sbjct: 68 SFADNKTLEWHFIGPLQSNKSR-LVA--ENFAWCHTVDRLKIAQRLSAQ-RPAAMPALNV 123
Query: 158 LVQVNTSGEE 167
L+Q+N S E+
Sbjct: 124 LIQINISDEQ 133
>gi|163749435|ref|ZP_02156683.1| hypothetical protein KT99_04189 [Shewanella benthica KT99]
gi|161330844|gb|EDQ01771.1| hypothetical protein KT99_04189 [Shewanella benthica KT99]
Length = 242
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-- 103
R+ QAA+ SSR D I+++AVSKTKP + I Y AG R FGENYVQE K L D
Sbjct: 25 RIEQAAQISSRNADEIQLLAVSKTKPNADILAAYAAGQRRFGENYVQEGESKVNALKDSC 84
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
++EWHFIG LQSNK K + + + + +V EKIA RLN PL + +Q+N
Sbjct: 85 PEIEWHFIGPLQSNKTKIIAS---HFDWMHTVSREKIASRLNDQ-RPKDLCPLNICIQIN 140
Query: 163 TSGE 166
S E
Sbjct: 141 ISSE 144
>gi|407712172|ref|YP_006832737.1| alanine racemase domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407234356|gb|AFT84555.1| alanine racemase domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 232
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R I ++AVSKT P +R + AG R FGENYVQE + K
Sbjct: 8 LEAVQQRIAMAAHVAGRDARSIALLAVSKTFPAEDVRAAHAAGQRAFGENYVQEALTKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D LEWHFIG LQSNK +P+ + V SVD KIA RL+ PL
Sbjct: 68 ALADLRASLEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQ-RPDALPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|212691474|ref|ZP_03299602.1| hypothetical protein BACDOR_00966 [Bacteroides dorei DSM 17855]
gi|423229538|ref|ZP_17215943.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
CL02T00C15]
gi|423245381|ref|ZP_17226455.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
CL02T12C06]
gi|212665954|gb|EEB26526.1| pyridoxal phosphate enzyme, YggS family [Bacteroides dorei DSM
17855]
gi|392633501|gb|EIY27444.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
CL02T00C15]
gi|392639148|gb|EIY32975.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
CL02T12C06]
Length = 222
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P +R+VAVSK P + + Y AG R FGE++VQE+ +K LP D+EWHFIG+LQ
Sbjct: 12 SELPSGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NKVK + P +AM+ ++D+ K+ +N+ + R + L+Q++ + EE +G F
Sbjct: 72 TNKVKYM---APYVAMIHAIDSYKLLVEVNKQASKVHR-VIPCLLQIHIAQEETKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|146301191|ref|YP_001195782.1| alanine racemase [Flavobacterium johnsoniae UW101]
gi|146155609|gb|ABQ06463.1| alanine racemase domain protein [Flavobacterium johnsoniae UW101]
Length = 219
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ + +VAVSKTKPVS + Q YEAG R FGEN +QE+ EK Q+P D++WH IG++QSNK
Sbjct: 15 PEHVTLVAVSKTKPVSDLMQAYEAGQRIFGENKIQEMTEKWEQMPKDIQWHMIGHVQSNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + P + ++ VD+ K+ +N+ R + L+Q+ + EE
Sbjct: 75 VKFM---APYVTLIHGVDSLKLLQEINKQALKNNR-TIDCLLQIYIAEEE 120
>gi|408672078|ref|YP_006871826.1| protein of unknown function UPF0001 [Emticicia oligotrophica DSM
17448]
gi|387853702|gb|AFK01799.1| protein of unknown function UPF0001 [Emticicia oligotrophica DSM
17448]
Length = 221
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
I +VAVSKTKPV ++ + Y AG + FGENYVQE+V K ++P D+EWHFIG+LQSNKVK
Sbjct: 19 ITLVAVSKTKPVEMLMEAYNAGFKRFGENYVQELVGKYEEMPKDIEWHFIGHLQSNKVKY 78
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNR 145
+ P ++++ SVD+ K+ +N+
Sbjct: 79 I---APFVSLIHSVDSFKLLQEINK 100
>gi|189467061|ref|ZP_03015846.1| hypothetical protein BACINT_03444 [Bacteroides intestinalis DSM
17393]
gi|189435325|gb|EDV04310.1| hypothetical protein BACINT_03444 [Bacteroides intestinalis DSM
17393]
Length = 222
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ +R+VAVSK P I + Y +G R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PEGVRLVAVSKFHPNEAIEEAYRSGQRVFGESKVQEMTAKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
+K + VP +A++ +D+ K+ +N+ E G K + L+Q++ + EE +G F +C
Sbjct: 75 IKYI---VPYVALIHGIDSYKLLVEVNKQAEKAG-KVVNCLLQLHIAEEETKFGFSFEEC 130
>gi|424070362|ref|ZP_17807797.1| hypothetical protein Pav037_0474 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|408000685|gb|EKG41032.1| hypothetical protein Pav037_0474 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 228
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + ++ QR+ AA + R P + ++AVSKTKP +R+ Y AG R FGENY+QE +
Sbjct: 5 AANISTLEQRIRDAALAAERDPASVGLLAVSKTKPARDLREAYTAGLRDFGENYLQEAMG 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L D L WHFIG +QSNK + + N V SVD KIA RL+ +PL
Sbjct: 65 KQLELSDLPLCWHFIGPIQSNKTRAI---AENFDWVHSVDRLKIAQRLSEQ-RPEALEPL 120
Query: 156 KVLVQVNTSGE 166
+ +QVN SGE
Sbjct: 121 NICIQVNVSGE 131
>gi|424589737|ref|ZP_18029184.1| hypothetical protein VCCP103710_0506 [Vibrio cholerae CP1037(10)]
gi|408036527|gb|EKG72953.1| hypothetical protein VCCP103710_0506 [Vibrio cholerae CP1037(10)]
Length = 236
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKVRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|293371408|ref|ZP_06617839.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CMC
3f]
gi|292633605|gb|EFF52163.1| pyridoxal phosphate enzyme, YggS family [Bacteroides ovatus SD CMC
3f]
Length = 222
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D+ K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDSYKLLAEVNKQAVKAGR-TVNCLLQIHVAQEE 120
>gi|391331349|ref|XP_003740110.1| PREDICTED: proline synthase co-transcribed bacterial homolog
protein-like [Metaseiulus occidentalis]
Length = 243
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 89/143 (62%), Gaps = 14/143 (9%)
Query: 33 DGVAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQ 92
+G A+ R V ++V AA+ ++R+VAVSKTKP I Y AG R FGENY+Q
Sbjct: 2 EGQIASNFRHVSEKVVSAAK-----GRQVRLVAVSKTKPKEAIFAAYAAGARHFGENYIQ 56
Query: 93 EIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMV 147
E+V+KA+ + +++WHFIG LQSNKVK LL P L VE+V + K+A L+
Sbjct: 57 ELVQKASDEKVLETCPEIKWHFIGRLQSNKVKALLKA-PRLWAVETVTSSKLADMLHTAW 115
Query: 148 ETMGRKP---LKVLVQVNTSGEE 167
+M +P L V+VQVNTSGEE
Sbjct: 116 NSMQPQPTSKLSVMVQVNTSGEE 138
>gi|325579003|ref|ZP_08148959.1| YggS family pyridoxal phosphate enzyme [Haemophilus parainfluenzae
ATCC 33392]
gi|325159238|gb|EGC71372.1| YggS family pyridoxal phosphate enzyme [Haemophilus parainfluenzae
ATCC 33392]
Length = 234
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL ++ Q++ A + + RP + ++AVSKTKP I + Y AG + FGENYVQE V+K
Sbjct: 6 ALETIHQKIQDATQLAHRPESAVTLLAVSKTKPNEAILEAYHAGQKAFGENYVQEGVDKI 65
Query: 99 AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
LEWHFIG LQSNK + L+A + +++++ KIA RLN + PL
Sbjct: 66 QYFEAQNIQLEWHFIGPLQSNKTR-LVA--EHFDWMQTLERAKIADRLNEQ-RPANKAPL 121
Query: 156 KVLVQVNTSGE 166
VL+Q+N S E
Sbjct: 122 NVLIQINISDE 132
>gi|344340057|ref|ZP_08770984.1| protein of unknown function UPF0001 [Thiocapsa marina 5811]
gi|343800236|gb|EGV18183.1| protein of unknown function UPF0001 [Thiocapsa marina 5811]
Length = 241
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
LR V R+ A ER+ RPP + ++AVSKT +R Y AG R FGE+Y QE +EK A
Sbjct: 16 LREVQARIRAAVERARRPPGSVALLAVSKTHGSDAVRAAYAAGQRAFGESYAQEAIEKIA 75
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG +Q NK + + V + + A RL+ + PLKV
Sbjct: 76 LLADLADIEWHFIGRIQGNKTRQIAT---RFDWVHGLSDAAHARRLSEQRPSE-LPPLKV 131
Query: 158 LVQVNTSGE 166
+QVN SGE
Sbjct: 132 CIQVNVSGE 140
>gi|160938829|ref|ZP_02086180.1| hypothetical protein CLOBOL_03723 [Clostridium bolteae ATCC
BAA-613]
gi|158437792|gb|EDP15552.1| hypothetical protein CLOBOL_03723 [Clostridium bolteae ATCC
BAA-613]
Length = 226
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + A R+ R P+ + ++AVSKTKPV ++ + Y+AG R FGEN VQEI+ K
Sbjct: 6 LEEVRKHIEDACRRAGRNPEEVTLIAVSKTKPVPMLMEAYDAGARDFGENKVQEILNKKP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
+LP+D+ WH IG+LQ NKV + + ++ SVD+ ++A ++ +G + +L+
Sbjct: 66 ELPEDIRWHMIGHLQRNKVHQV---IDKAVLIHSVDSLRLAQQIEDDAAKLGLD-VDILL 121
Query: 160 QVNTSGEEYGECFI 173
+VN + EE F+
Sbjct: 122 EVNVAREESKYGFL 135
>gi|17533025|ref|NP_495001.1| Protein F09E5.8 [Caenorhabditis elegans]
gi|1731185|sp|P52057.1|PROSC_CAEEL RecName: Full=Proline synthase co-transcribed bacterial homolog
protein
gi|351061015|emb|CCD68760.1| Protein F09E5.8 [Caenorhabditis elegans]
Length = 244
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 35 VAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
+ +L ++I+ V A +S+ R R+VAVSKTK +I Y R FGENYVQE+
Sbjct: 5 IVQKSLFNIIEAVADAV-TASQATKRCRLVAVSKTKSADLIEACYSQNQRHFGENYVQEL 63
Query: 95 VEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG 151
EK+ L D+ WHFIG +QSNK+ + P L VE+V+ EK A ++ G
Sbjct: 64 EEKSDVLASKCLDIRWHFIGQVQSNKIGK-ICNSPGLWCVETVETEKHARIFDKEWSKHG 122
Query: 152 R--KPLKVLVQVNTSGEE 167
PL+VLVQVNTSGE+
Sbjct: 123 ANLSPLRVLVQVNTSGED 140
>gi|119179922|ref|XP_001241476.1| hypothetical protein CIMG_08639 [Coccidioides immitis RS]
Length = 268
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 83/149 (55%), Gaps = 18/149 (12%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEI 94
A+AL + + V +S P +R+VAVSK KP S I +Y H FGENY+QE+
Sbjct: 7 ASALLANLSSVTSRISAASVPGSSVRLVAVSKLKPASDILALYNPPTSHLHFGENYLQEL 66
Query: 95 VEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------- 145
+EK+ LP ++ WHFIG LQSNK L V L VESVD +K A L++
Sbjct: 67 LEKSKILPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDTQKKATLLDKGWGERLKNH 126
Query: 146 ----MVETMGR-KP--LKVLVQVNTSGEE 167
+ GR +P L+V VQVNTSGEE
Sbjct: 127 SAQQQQQQQGRAEPERLRVFVQVNTSGEE 155
>gi|254584384|ref|XP_002497760.1| ZYRO0F12870p [Zygosaccharomyces rouxii]
gi|238940653|emb|CAR28827.1| ZYRO0F12870p [Zygosaccharomyces rouxii]
Length = 274
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ ++AVSK KP S I+ +Y+ G R FGENYVQE++EK+ LP D++WHFIG LQ+NK K
Sbjct: 60 VLLLAVSKLKPASDIQILYDHGVRHFGENYVQELIEKSKLLPQDIQWHFIGGLQTNKCKD 119
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
LA V N+ VE++D+ K A +LN G + +Q+NTS E
Sbjct: 120 -LAKVTNIRYVETIDSLKKAKKLNE-TRVEGAPVILCNIQINTSDE 163
>gi|429886751|ref|ZP_19368295.1| Hypothetical protein YggS, proline synthase co-transcribed [Vibrio
cholerae PS15]
gi|429226356|gb|EKY32481.1| Hypothetical protein YggS, proline synthase co-transcribed [Vibrio
cholerae PS15]
Length = 236
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|347541728|ref|YP_004849155.1| alanine racemase domain containing protein [Pseudogulbenkiania sp.
NH8B]
gi|345644908|dbj|BAK78741.1| alanine racemase domain protein [Pseudogulbenkiania sp. NH8B]
Length = 231
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
+++L SV QR+ A + R + ++AVSKT P I++ Y AG R FGENYVQE+
Sbjct: 6 SSSLDSVRQRLAAAEAAAGRASGSVCLLAVSKTFPADAIQEAYAAGQRAFGENYVQELQA 65
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLA-MVESVDNEKIAGRLNRMVETMGRKP 154
K A L D+EWHFIG LQSNK +P V LA V SV+ KIA RL+ P
Sbjct: 66 KGAVLGGLDIEWHFIGPLQSNKTRP----VAELAHWVHSVERLKIAERLSSQ-RPASLPP 120
Query: 155 LKVLVQVNTSGEE 167
L V +QVN SGEE
Sbjct: 121 LNVCLQVNVSGEE 133
>gi|260063098|ref|YP_003196178.1| hypothetical protein RB2501_15954 [Robiginitalea biformata
HTCC2501]
gi|88784667|gb|EAR15837.1| hypothetical protein RB2501_15954 [Robiginitalea biformata
HTCC2501]
Length = 219
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 10/120 (8%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
AE PD + +VAVSKTK S I + YEAGHR FGEN VQE+ K +LP D++WH I
Sbjct: 10 AELKESLPDGVTLVAVSKTKDDSAIMEAYEAGHRVFGENRVQELTAKYERLPKDIQWHMI 69
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV---LVQVNTSGEE 167
G+LQ NKVK L P +++++ VD+ RL R ++ GR+ +V L+QV+ + E+
Sbjct: 70 GHLQRNKVKYL---APFVSLIQGVDSP----RLLREIDKRGRQAGRVIDCLLQVHIAEED 122
>gi|15640488|ref|NP_230115.1| hypothetical protein VC0461 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|153802601|ref|ZP_01957187.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153823179|ref|ZP_01975846.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|229509065|ref|ZP_04398553.1| hypothetical protein VCE_000468 [Vibrio cholerae B33]
gi|229519733|ref|ZP_04409176.1| hypothetical protein VCC_003765 [Vibrio cholerae RC9]
gi|229606245|ref|YP_002876893.1| hypothetical protein VCD_001146 [Vibrio cholerae MJ-1236]
gi|254291172|ref|ZP_04961968.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254850692|ref|ZP_05240042.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744292|ref|ZP_05418245.1| hypothetical protein VCH_000603 [Vibrio cholera CIRS 101]
gi|262147283|ref|ZP_06028082.1| hypothetical protein VIG_000131 [Vibrio cholerae INDRE 91/1]
gi|360037102|ref|YP_004938865.1| hypothetical protein Vch1786_I2782 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740334|ref|YP_005332303.1| hypothetical protein O3Y_02140 [Vibrio cholerae IEC224]
gi|384423762|ref|YP_005633120.1| hypothetical protein VCLMA_A0419 [Vibrio cholerae LMA3984-4]
gi|417812446|ref|ZP_12459106.1| hypothetical protein VCHC49A2_1435 [Vibrio cholerae HC-49A2]
gi|417815308|ref|ZP_12461942.1| hypothetical protein VCHCUF01_0536 [Vibrio cholerae HCUF01]
gi|417823599|ref|ZP_12470191.1| hypothetical protein VCHE48_1518 [Vibrio cholerae HE48]
gi|418331169|ref|ZP_12942119.1| hypothetical protein VCHC06A1_0501 [Vibrio cholerae HC-06A1]
gi|418336326|ref|ZP_12945225.1| hypothetical protein VCHC23A1_0658 [Vibrio cholerae HC-23A1]
gi|418342706|ref|ZP_12949506.1| hypothetical protein VCHC28A1_0501 [Vibrio cholerae HC-28A1]
gi|418347870|ref|ZP_12952606.1| hypothetical protein VCHC43A1_0509 [Vibrio cholerae HC-43A1]
gi|418354307|ref|ZP_12957031.1| hypothetical protein VCHC61A1_1308 [Vibrio cholerae HC-61A1]
gi|419824932|ref|ZP_14348439.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
CP1033(6)]
gi|421315800|ref|ZP_15766372.1| hypothetical protein VCCP10325_0513 [Vibrio cholerae CP1032(5)]
gi|421319249|ref|ZP_15769808.1| hypothetical protein VCCP103811_0502 [Vibrio cholerae CP1038(11)]
gi|421323282|ref|ZP_15773811.1| hypothetical protein VCCP104114_0476 [Vibrio cholerae CP1041(14)]
gi|421327688|ref|ZP_15778204.1| hypothetical protein VCCP104215_1442 [Vibrio cholerae CP1042(15)]
gi|421330689|ref|ZP_15781171.1| hypothetical protein VCCP104619_0537 [Vibrio cholerae CP1046(19)]
gi|421334287|ref|ZP_15784757.1| hypothetical protein VCCP104821_0434 [Vibrio cholerae CP1048(21)]
gi|421338184|ref|ZP_15788623.1| hypothetical protein VCHC20A2_0519 [Vibrio cholerae HC-20A2]
gi|421345736|ref|ZP_15796121.1| hypothetical protein VCHC46A1_0530 [Vibrio cholerae HC-46A1]
gi|421350323|ref|ZP_15800689.1| hypothetical protein VCHE25_1534 [Vibrio cholerae HE-25]
gi|422890501|ref|ZP_16932926.1| hypothetical protein VCHC40A1_0480 [Vibrio cholerae HC-40A1]
gi|422901301|ref|ZP_16936679.1| hypothetical protein VCHC48A1_0484 [Vibrio cholerae HC-48A1]
gi|422905484|ref|ZP_16940342.1| hypothetical protein VCHC70A1_0501 [Vibrio cholerae HC-70A1]
gi|422912205|ref|ZP_16946735.1| hypothetical protein VCHFU02_0499 [Vibrio cholerae HFU-02]
gi|422921715|ref|ZP_16954925.1| hypothetical protein VCBJG01_0468 [Vibrio cholerae BJG-01]
gi|422924684|ref|ZP_16957722.1| hypothetical protein VCHC38A1_0504 [Vibrio cholerae HC-38A1]
gi|423143730|ref|ZP_17131348.1| hypothetical protein VCHC19A1_0499 [Vibrio cholerae HC-19A1]
gi|423148714|ref|ZP_17136075.1| hypothetical protein VCHC21A1_0506 [Vibrio cholerae HC-21A1]
gi|423152505|ref|ZP_17139707.1| hypothetical protein VCHC22A1_0488 [Vibrio cholerae HC-22A1]
gi|423155289|ref|ZP_17142428.1| hypothetical protein VCHC32A1_0502 [Vibrio cholerae HC-32A1]
gi|423159148|ref|ZP_17146122.1| hypothetical protein VCHC33A2_0488 [Vibrio cholerae HC-33A2]
gi|423163826|ref|ZP_17150622.1| hypothetical protein VCHC48B2_0479 [Vibrio cholerae HC-48B2]
gi|423729847|ref|ZP_17703168.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-17A1]
gi|423747073|ref|ZP_17711355.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-50A2]
gi|423891677|ref|ZP_17725369.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-62A1]
gi|423926454|ref|ZP_17729986.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-77A1]
gi|424001009|ref|ZP_17744102.1| hypothetical protein VCHC17A2_0507 [Vibrio cholerae HC-17A2]
gi|424005169|ref|ZP_17748157.1| hypothetical protein VCHC37A1_0633 [Vibrio cholerae HC-37A1]
gi|424022962|ref|ZP_17762629.1| hypothetical protein VCHC62B1_0500 [Vibrio cholerae HC-62B1]
gi|424025980|ref|ZP_17765600.1| hypothetical protein VCHC69A1_0499 [Vibrio cholerae HC-69A1]
gi|424585362|ref|ZP_18024958.1| hypothetical protein VCCP10303_0508 [Vibrio cholerae CP1030(3)]
gi|424593982|ref|ZP_18033325.1| hypothetical protein VCCP1040_0505 [Vibrio cholerae CP1040(13)]
gi|424597918|ref|ZP_18037120.1| hypothetical protein VCCP104417_0509 [Vibrio Cholerae CP1044(17)]
gi|424600682|ref|ZP_18039841.1| hypothetical protein VCCP1047_0497 [Vibrio cholerae CP1047(20)]
gi|424605599|ref|ZP_18044566.1| hypothetical protein VCCP1050_0512 [Vibrio cholerae CP1050(23)]
gi|424609314|ref|ZP_18048177.1| hypothetical protein VCHC39A1_0498 [Vibrio cholerae HC-39A1]
gi|424612234|ref|ZP_18051045.1| hypothetical protein VCHC41A1_0515 [Vibrio cholerae HC-41A1]
gi|424616111|ref|ZP_18054806.1| hypothetical protein VCHC42A1_0503 [Vibrio cholerae HC-42A1]
gi|424620874|ref|ZP_18059405.1| hypothetical protein VCHC47A1_0520 [Vibrio cholerae HC-47A1]
gi|424643691|ref|ZP_18081449.1| hypothetical protein VCHC56A2_0512 [Vibrio cholerae HC-56A2]
gi|424651613|ref|ZP_18089141.1| hypothetical protein VCHC57A2_0506 [Vibrio cholerae HC-57A2]
gi|424655561|ref|ZP_18092867.1| hypothetical protein VCHC81A2_0509 [Vibrio cholerae HC-81A2]
gi|440708667|ref|ZP_20889328.1| hypothetical protein VC4260B_00730 [Vibrio cholerae 4260B]
gi|443502511|ref|ZP_21069503.1| hypothetical protein VCHC64A1_00494 [Vibrio cholerae HC-64A1]
gi|443506419|ref|ZP_21073216.1| hypothetical protein VCHC65A1_00498 [Vibrio cholerae HC-65A1]
gi|443510253|ref|ZP_21076925.1| hypothetical protein VCHC67A1_00497 [Vibrio cholerae HC-67A1]
gi|443514090|ref|ZP_21080634.1| hypothetical protein VCHC68A1_00493 [Vibrio cholerae HC-68A1]
gi|443517903|ref|ZP_21084325.1| hypothetical protein VCHC71A1_00493 [Vibrio cholerae HC-71A1]
gi|443522485|ref|ZP_21088735.1| hypothetical protein VCHC72A2_00496 [Vibrio cholerae HC-72A2]
gi|443530389|ref|ZP_21096405.1| hypothetical protein VCHC7A1_01507 [Vibrio cholerae HC-7A1]
gi|443534161|ref|ZP_21100080.1| hypothetical protein VCHC80A1_00466 [Vibrio cholerae HC-80A1]
gi|443537743|ref|ZP_21103600.1| hypothetical protein VCHC81A1_01287 [Vibrio cholerae HC-81A1]
gi|449054309|ref|ZP_21732977.1| Hypothetical protein YggS [Vibrio cholerae O1 str. Inaba G4222]
gi|12230811|sp|Q9KUQ4.1|Y461_VIBCH RecName: Full=UPF0001 protein VC_0461
gi|9654886|gb|AAF93634.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|124121864|gb|EAY40607.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|126519305|gb|EAZ76528.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|150422866|gb|EDN14817.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229344422|gb|EEO09397.1| hypothetical protein VCC_003765 [Vibrio cholerae RC9]
gi|229353990|gb|EEO18924.1| hypothetical protein VCE_000468 [Vibrio cholerae B33]
gi|229368900|gb|ACQ59323.1| hypothetical protein VCD_001146 [Vibrio cholerae MJ-1236]
gi|254846397|gb|EET24811.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255738232|gb|EET93624.1| hypothetical protein VCH_000603 [Vibrio cholera CIRS 101]
gi|262031277|gb|EEY49892.1| hypothetical protein VIG_000131 [Vibrio cholerae INDRE 91/1]
gi|327483315|gb|AEA77722.1| Hypothetical protein YggS, proline synthase co- transcribed
bacterial-like protein PROSC [Vibrio cholerae LMA3984-4]
gi|340043294|gb|EGR04253.1| hypothetical protein VCHCUF01_0536 [Vibrio cholerae HCUF01]
gi|340043826|gb|EGR04783.1| hypothetical protein VCHC49A2_1435 [Vibrio cholerae HC-49A2]
gi|340048228|gb|EGR09150.1| hypothetical protein VCHE48_1518 [Vibrio cholerae HE48]
gi|341625816|gb|EGS51243.1| hypothetical protein VCHC70A1_0501 [Vibrio cholerae HC-70A1]
gi|341627189|gb|EGS52515.1| hypothetical protein VCHC48A1_0484 [Vibrio cholerae HC-48A1]
gi|341627514|gb|EGS52817.1| hypothetical protein VCHC40A1_0480 [Vibrio cholerae HC-40A1]
gi|341641141|gb|EGS65700.1| hypothetical protein VCHFU02_0499 [Vibrio cholerae HFU-02]
gi|341648218|gb|EGS72283.1| hypothetical protein VCBJG01_0468 [Vibrio cholerae BJG-01]
gi|341648637|gb|EGS72681.1| hypothetical protein VCHC38A1_0504 [Vibrio cholerae HC-38A1]
gi|356421659|gb|EHH75153.1| hypothetical protein VCHC06A1_0501 [Vibrio cholerae HC-06A1]
gi|356422013|gb|EHH75500.1| hypothetical protein VCHC21A1_0506 [Vibrio cholerae HC-21A1]
gi|356426929|gb|EHH80212.1| hypothetical protein VCHC19A1_0499 [Vibrio cholerae HC-19A1]
gi|356433107|gb|EHH86300.1| hypothetical protein VCHC23A1_0658 [Vibrio cholerae HC-23A1]
gi|356434761|gb|EHH87931.1| hypothetical protein VCHC22A1_0488 [Vibrio cholerae HC-22A1]
gi|356438064|gb|EHH91120.1| hypothetical protein VCHC28A1_0501 [Vibrio cholerae HC-28A1]
gi|356443247|gb|EHH96070.1| hypothetical protein VCHC32A1_0502 [Vibrio cholerae HC-32A1]
gi|356447981|gb|EHI00766.1| hypothetical protein VCHC43A1_0509 [Vibrio cholerae HC-43A1]
gi|356450407|gb|EHI03129.1| hypothetical protein VCHC33A2_0488 [Vibrio cholerae HC-33A2]
gi|356454083|gb|EHI06738.1| hypothetical protein VCHC61A1_1308 [Vibrio cholerae HC-61A1]
gi|356456473|gb|EHI09072.1| hypothetical protein VCHC48B2_0479 [Vibrio cholerae HC-48B2]
gi|356648256|gb|AET28311.1| hypothetical protein Vch1786_I2782 [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793844|gb|AFC57315.1| hypothetical protein O3Y_02140 [Vibrio cholerae IEC224]
gi|395922541|gb|EJH33357.1| hypothetical protein VCCP10325_0513 [Vibrio cholerae CP1032(5)]
gi|395923127|gb|EJH33939.1| hypothetical protein VCCP104114_0476 [Vibrio cholerae CP1041(14)]
gi|395925574|gb|EJH36371.1| hypothetical protein VCCP103811_0502 [Vibrio cholerae CP1038(11)]
gi|395931422|gb|EJH42167.1| hypothetical protein VCCP104215_1442 [Vibrio cholerae CP1042(15)]
gi|395934542|gb|EJH45280.1| hypothetical protein VCCP104619_0537 [Vibrio cholerae CP1046(19)]
gi|395937817|gb|EJH48528.1| hypothetical protein VCCP104821_0434 [Vibrio cholerae CP1048(21)]
gi|395946547|gb|EJH57210.1| hypothetical protein VCHC20A2_0519 [Vibrio cholerae HC-20A2]
gi|395948405|gb|EJH59055.1| hypothetical protein VCHC46A1_0530 [Vibrio cholerae HC-46A1]
gi|395954445|gb|EJH65055.1| hypothetical protein VCHE25_1534 [Vibrio cholerae HE-25]
gi|395964021|gb|EJH74264.1| hypothetical protein VCHC57A2_0506 [Vibrio cholerae HC-57A2]
gi|395964108|gb|EJH74350.1| hypothetical protein VCHC56A2_0512 [Vibrio cholerae HC-56A2]
gi|395967076|gb|EJH77179.1| hypothetical protein VCHC42A1_0503 [Vibrio cholerae HC-42A1]
gi|395975690|gb|EJH85171.1| hypothetical protein VCHC47A1_0520 [Vibrio cholerae HC-47A1]
gi|395977762|gb|EJH87161.1| hypothetical protein VCCP10303_0508 [Vibrio cholerae CP1030(3)]
gi|395979274|gb|EJH88633.1| hypothetical protein VCCP1047_0497 [Vibrio cholerae CP1047(20)]
gi|408010210|gb|EKG48082.1| hypothetical protein VCHC39A1_0498 [Vibrio cholerae HC-39A1]
gi|408016970|gb|EKG54494.1| hypothetical protein VCHC41A1_0515 [Vibrio cholerae HC-41A1]
gi|408037624|gb|EKG74012.1| hypothetical protein VCCP1040_0505 [Vibrio cholerae CP1040(13)]
gi|408044975|gb|EKG80851.1| hypothetical protein VCCP104417_0509 [Vibrio Cholerae CP1044(17)]
gi|408046808|gb|EKG82473.1| hypothetical protein VCCP1050_0512 [Vibrio cholerae CP1050(23)]
gi|408057533|gb|EKG92378.1| hypothetical protein VCHC81A2_0509 [Vibrio cholerae HC-81A2]
gi|408611956|gb|EKK85312.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
CP1033(6)]
gi|408627746|gb|EKL00549.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-17A1]
gi|408642291|gb|EKL14041.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-50A2]
gi|408658786|gb|EKL29846.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-77A1]
gi|408660105|gb|EKL31135.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-62A1]
gi|408849213|gb|EKL89241.1| hypothetical protein VCHC37A1_0633 [Vibrio cholerae HC-37A1]
gi|408849745|gb|EKL89754.1| hypothetical protein VCHC17A2_0507 [Vibrio cholerae HC-17A2]
gi|408874527|gb|EKM13697.1| hypothetical protein VCHC62B1_0500 [Vibrio cholerae HC-62B1]
gi|408881453|gb|EKM20338.1| hypothetical protein VCHC69A1_0499 [Vibrio cholerae HC-69A1]
gi|439975763|gb|ELP51870.1| hypothetical protein VC4260B_00730 [Vibrio cholerae 4260B]
gi|443433123|gb|ELS75641.1| hypothetical protein VCHC64A1_00494 [Vibrio cholerae HC-64A1]
gi|443436954|gb|ELS83064.1| hypothetical protein VCHC65A1_00498 [Vibrio cholerae HC-65A1]
gi|443440827|gb|ELS90508.1| hypothetical protein VCHC67A1_00497 [Vibrio cholerae HC-67A1]
gi|443444598|gb|ELS97867.1| hypothetical protein VCHC68A1_00493 [Vibrio cholerae HC-68A1]
gi|443448436|gb|ELT05066.1| hypothetical protein VCHC71A1_00493 [Vibrio cholerae HC-71A1]
gi|443451554|gb|ELT11808.1| hypothetical protein VCHC72A2_00496 [Vibrio cholerae HC-72A2]
gi|443458590|gb|ELT25985.1| hypothetical protein VCHC7A1_01507 [Vibrio cholerae HC-7A1]
gi|443462662|gb|ELT33694.1| hypothetical protein VCHC80A1_00466 [Vibrio cholerae HC-80A1]
gi|443466568|gb|ELT41225.1| hypothetical protein VCHC81A1_01287 [Vibrio cholerae HC-81A1]
gi|448266102|gb|EMB03332.1| Hypothetical protein YggS [Vibrio cholerae O1 str. Inaba G4222]
Length = 236
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVNMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|237712085|ref|ZP_04542566.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265751787|ref|ZP_06087580.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 3_1_33FAA]
gi|229453406|gb|EEO59127.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263236579|gb|EEZ22049.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 3_1_33FAA]
Length = 222
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P +R+VAVSK P + + Y AG R FGE++VQE+ +K LP D+EWHFIG+LQ
Sbjct: 12 SELPTGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NKVK + P +AM+ ++D+ K+ +N+ + R + L+Q++ + EE +G F
Sbjct: 72 TNKVKYM---APYVAMIHAIDSYKLLVEVNKQASKVHR-VIPCLLQIHIAQEETKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|357055402|ref|ZP_09116470.1| YggS family pyridoxal phosphate enzyme [Clostridium clostridioforme
2_1_49FAA]
gi|355382521|gb|EHG29618.1| YggS family pyridoxal phosphate enzyme [Clostridium clostridioforme
2_1_49FAA]
Length = 226
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + + A R+ R P+ + ++AVSKTKP+ ++ + Y+AG R FGEN VQEI+ K
Sbjct: 6 LGEVRKHIEDACRRAGRSPEEVTLIAVSKTKPIPMLMEAYDAGTRDFGENKVQEILNKKP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
+LP+D+ WH IG+LQ NKV + + ++ SVD+ ++A ++ +G + +L+
Sbjct: 66 ELPEDIRWHMIGHLQRNKVHQV---IDKAVLIHSVDSLRLAQQIETDAAKLGLD-VDILL 121
Query: 160 QVNTSGEEYGECFI 173
+VN + EE F+
Sbjct: 122 EVNVAREESKYGFL 135
>gi|313148210|ref|ZP_07810403.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664022|ref|ZP_18101059.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
616]
gi|313136977|gb|EFR54337.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404576058|gb|EKA80798.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
616]
Length = 222
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PSGVRLVAVSKFHPNEAIEEAYRAGQRIFGESKVQEMTGKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
+K + P ++M+ +D+ K+ +N+ GR ++ L+Q++ + EE +G F +C
Sbjct: 75 IKYM---APYVSMIHGIDSYKLLAEVNKQAIKAGR-VIRCLLQIHIAQEETKFGFSFDEC 130
>gi|237747221|ref|ZP_04577701.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378572|gb|EEO28663.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 239
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA- 98
L+ + QR+ AA + R P + ++AVSKT+P + I + +AG + FGENY QE V K
Sbjct: 8 LQEIRQRIQSAARTTERNPSTVHLLAVSKTQPTNAILEAADAGQKAFGENYEQEAVSKIL 67
Query: 99 ---AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
A PD LEWHFIG +QSNK + + + V SVD EKIA RL+ P
Sbjct: 68 AIRASRPDLKLEWHFIGPIQSNKTRSI---AEHFDWVHSVDREKIARRLSDQ-RPAALAP 123
Query: 155 LKVLVQVNTSGE 166
L + +QVN SGE
Sbjct: 124 LNICLQVNISGE 135
>gi|268593080|ref|ZP_06127301.1| pyridoxal phosphate enzyme, YggS family [Providencia rettgeri DSM
1131]
gi|291311349|gb|EFE51802.1| pyridoxal phosphate enzyme, YggS family [Providencia rettgeri DSM
1131]
Length = 230
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V R+ AA R P I ++AVSKTKP I + EAG R FGENYVQE VEK
Sbjct: 7 ISDVTARIEHAAAECQRSPQDITLLAVSKTKPCEAISEAIEAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+DL WHFIG LQSNK + L+A + ++D KIA RLN + + PL V
Sbjct: 67 YFSHRNDLIWHFIGPLQSNKSR-LVA--EHFDWFHTLDRAKIAQRLNDQRPS-EKSPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|345429709|ref|YP_004822827.1| hypothetical protein PARA_11320 [Haemophilus parainfluenzae T3T1]
gi|301155770|emb|CBW15238.1| predicted enzyme [Haemophilus parainfluenzae T3T1]
Length = 235
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 79/131 (60%), Gaps = 7/131 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
AL ++ Q++ + + + RP + ++AVSKTKP I + Y AG + FGENYVQE V+K
Sbjct: 7 ALETIHQQIQTSTQLAHRPESAVTLLAVSKTKPNEAILEAYHAGQKAFGENYVQEGVDKI 66
Query: 99 AQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
LEWHFIG LQSNK + L+A + +++++ KIA RLN T + PL
Sbjct: 67 QYFEAQNIQLEWHFIGPLQSNKTR-LVA--EHFDWMQTLERAKIADRLNEQRPT-NKAPL 122
Query: 156 KVLVQVNTSGE 166
VL+Q+N S E
Sbjct: 123 NVLIQINISDE 133
>gi|167381023|ref|XP_001735540.1| proline synthetase associated protein [Entamoeba dispar SAW760]
gi|165902419|gb|EDR28257.1| proline synthetase associated protein, putative [Entamoeba dispar
SAW760]
Length = 228
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 85/129 (65%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVEKAAQL 101
VI +++ + + +P + ++AVSKTKP ++ +Y + H FGENY+QE+ EKA +L
Sbjct: 9 VIDKINHLSSQREKP---VCLIAVSKTKPKEAVQHLYNKYNHYVFGENYIQELHEKATEL 65
Query: 102 PD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+ ++EWHFIG LQSNK+K LL P+L ++++ + +IA +LN+ K + V+
Sbjct: 66 EEVCPNIEWHFIGRLQSNKLK-LLISTPHLKCIQTIHSLEIAEKLNKAC-INANKVIDVM 123
Query: 159 VQVNTSGEE 167
VQ+N+SGEE
Sbjct: 124 VQINSSGEE 132
>gi|291615213|ref|YP_003525370.1| alanine racemase domain protein [Sideroxydans lithotrophicus ES-1]
gi|291585325|gb|ADE12983.1| alanine racemase domain protein [Sideroxydans lithotrophicus ES-1]
Length = 226
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++ + QAA + R + ++AVSKT P +R+ Y G FGENY+QE +EK A
Sbjct: 8 LQATRDAIAQAAISAHRNVAEVHLLAVSKTFPAEAVREAYRGGQAAFGENYLQEALEKIA 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D LEWHFIG +QSNK + + N A V SVD KIA RL+ + PL +
Sbjct: 68 ALRDLPLEWHFIGPIQSNKTRAI---AENFAWVHSVDRLKIAERLSAQRPSQ-LPPLNIC 123
Query: 159 VQVNTSGEE 167
+QVN SGEE
Sbjct: 124 LQVNVSGEE 132
>gi|170691371|ref|ZP_02882536.1| alanine racemase domain protein [Burkholderia graminis C4D1M]
gi|170143576|gb|EDT11739.1| alanine racemase domain protein [Burkholderia graminis C4D1M]
Length = 232
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R I ++AVSKT P +R + AG R FGENYVQE + K
Sbjct: 8 LEAVQQRIALAAHVAGRDARSIALLAVSKTFPAEDVRAAHAAGQRAFGENYVQEALTKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPL 155
L D LEWHFIG LQSNK +P+ V SVD KIA RL+ + ET+ PL
Sbjct: 68 VLADLRSTLEWHFIGPLQSNKTRPV---AEQFDWVHSVDRLKIAQRLSEQRPETL--PPL 122
Query: 156 KVLVQVNTSGE 166
V +QVN SGE
Sbjct: 123 NVCLQVNISGE 133
>gi|167630158|ref|YP_001680657.1| hypothetical protein HM1_2089 [Heliobacterium modesticaldum Ice1]
gi|167592898|gb|ABZ84646.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 229
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ AA R+ R P+ IR++AV+KT PV I++V +AG GEN VQE++ K
Sbjct: 8 LGRVRQRIRDAAMRAGREPEAIRLLAVTKTVPVEQIQEVVDAGVDLLGENRVQELLAKHR 67
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
Q+ + WH IG LQ+NKVK + V ++ S+D +A +NR +GR P+ LV
Sbjct: 68 QVRGSVRWHMIGTLQTNKVKYIYDKVD---LIHSLDRLSLAQAINRYAARLGR-PIDCLV 123
Query: 160 QVNTSGEE 167
+VN +GE+
Sbjct: 124 EVNVAGEK 131
>gi|46143323|ref|ZP_00135498.2| COG0325: Predicted enzyme with a TIM-barrel fold [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207540|ref|YP_001052765.1| hypothetical protein APL_0052 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|307256072|ref|ZP_07537860.1| hypothetical protein appser10_780 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|126096332|gb|ABN73160.1| hypothetical protein APL_0052 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306865494|gb|EFM97389.1| hypothetical protein appser10_780 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 231
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIEEAIAAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGALQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K + L+A N +++VD KIA RL+ + + PL VL+Q+N S E
Sbjct: 84 KTR-LVA--ENFDWIQTVDRLKIAERLSAQ-RSANKAPLNVLIQINISDE 129
>gi|355646687|ref|ZP_09054560.1| hypothetical protein HMPREF1030_03646 [Pseudomonas sp. 2_1_26]
gi|354828407|gb|EHF12529.1| hypothetical protein HMPREF1030_03646 [Pseudomonas sp. 2_1_26]
Length = 230
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L
Sbjct: 11 VAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QV
Sbjct: 71 DLPLSWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|423277872|ref|ZP_17256786.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
610]
gi|404586747|gb|EKA91308.1| YggS family pyridoxal phosphate enzyme [Bacteroides fragilis HMW
610]
Length = 222
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PSGVRLVAVSKFHPNEAIEEAYRAGQRIFGESKVQEMTGKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
+K + P ++M+ +D+ K+ +N+ GR ++ L+Q++ + EE +G F +C
Sbjct: 75 IKYM---APYVSMIHGIDSYKLLAEVNKQAIKAGR-VIRCLLQIHIAQEETKFGFSFDEC 130
>gi|149376943|ref|ZP_01894697.1| hypothetical protein MDG893_14515 [Marinobacter algicola DG893]
gi|149358720|gb|EDM47190.1| hypothetical protein MDG893_14515 [Marinobacter algicola DG893]
Length = 230
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + SV +R+ +A ++ R + ++AVSKT+P +R Y AG R FGENYVQE ++
Sbjct: 5 ADNIGSVTRRIQKATLKAGRSAGSVYLLAVSKTRPADELRTAYSAGQRAFGENYVQEALD 64
Query: 97 KAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K +L D +EWHFIG +QSNK + + A SVD KIA RLN + T+
Sbjct: 65 KMEELKELDAIEWHFIGPIQSNKTRQIAEA---FAWAHSVDRLKIAQRLNDQRPPTL--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL + +QVN + EE
Sbjct: 120 PLNICLQVNINNEE 133
>gi|153947334|ref|YP_001399814.1| hypothetical protein YpsIP31758_0830 [Yersinia pseudotuberculosis
IP 31758]
gi|152958829|gb|ABS46290.1| conserved hypothetical protein TIGR00044 [Yersinia
pseudotuberculosis IP 31758]
Length = 232
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V R+ AA R P+ + ++AVSKTKPV+ I + AG FGENYVQE V+K
Sbjct: 8 LQDVRARIATAAHNCGRSPEEVTLLAVSKTKPVAAIEKAIAAGQYAFGENYVQEGVDKIH 67
Query: 100 QLPDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D+ LEWHFIG LQSNK + L+A N A +VD KIA RL+ L +
Sbjct: 68 SFADNKTLEWHFIGPLQSNKSR-LVA--ENFAWCHTVDRLKIAQRLSAQ-RPAAMPALNI 123
Query: 158 LVQVNTSGEE 167
L+Q+N S E+
Sbjct: 124 LIQINISDEQ 133
>gi|402758921|ref|ZP_10861177.1| hypothetical protein ANCT7_14661 [Acinetobacter sp. NCTC 7422]
Length = 230
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
+SV+ ++ QA + R P ++++AVSKT P + +R +Y G RCFGENY+QE +EK +
Sbjct: 9 QSVLNQIEQACQHVQRDPATVQLLAVSKTHPSTRLRTMYAVGQRCFGENYLQEALEKIEE 68
Query: 101 LPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
L D ++EWHFIG++Q NK K L V VD IA RL+ + +K L + +
Sbjct: 69 LQDLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQ-RSDQQKALNLCL 124
Query: 160 QVNTSGEE 167
QVN G++
Sbjct: 125 QVNIDGQD 132
>gi|119513658|ref|ZP_01632662.1| hypothetical protein N9414_22978 [Nodularia spumigena CCY9414]
gi|119461687|gb|EAW42720.1| hypothetical protein N9414_22978 [Nodularia spumigena CCY9414]
Length = 222
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFI 110
R+S PP +R++AVSKT P IR Y AG R FGEN +QE K A+L D D+ WHFI
Sbjct: 13 RASLPPS-VRLIAVSKTFPAEDIRAAYNAGIRDFGENRIQEAASKQAELQDLPDITWHFI 71
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLVQVNTSG 165
G LQSNK K L + SVDN K+A RLN++ + +G P +K+L N SG
Sbjct: 72 GGLQSNKAKKALE---LFDWIHSVDNLKLAQRLNQLAQQLGVTPQVCLQVKILPDPNKSG 128
Query: 166 EEYGECFIKCSWSHSC 181
E + C
Sbjct: 129 WTVPELLADLDALNQC 144
>gi|229512523|ref|ZP_04401994.1| hypothetical protein VCB_000163 [Vibrio cholerae TMA 21]
gi|229530303|ref|ZP_04419691.1| protein of unknown function [Vibrio cholerae 12129(1)]
gi|229332076|gb|EEN97564.1| protein of unknown function [Vibrio cholerae 12129(1)]
gi|229350416|gb|EEO15365.1| hypothetical protein VCB_000163 [Vibrio cholerae TMA 21]
Length = 236
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|372275233|ref|ZP_09511269.1| hypothetical protein PSL1_09056 [Pantoea sp. SL1_M5]
Length = 235
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V QR+ AA R P+ I ++AVSKTKP S + + + A FGENYVQE VEK
Sbjct: 8 LQQVRQRIAAAAASCGRAPEEITLLAVSKTKPASAVEEAFAADQIAFGENYVQEGVEKVQ 67
Query: 100 QLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L +LEWHFIG LQSNK + L+A + A ++D ++IA RLN PL V
Sbjct: 68 ALAAHPELEWHFIGPLQSNKSR-LVA--EHFAWCHTIDRQRIAQRLNDQ-RPASLPPLNV 123
Query: 158 LVQVNTSGE 166
L+QVN S E
Sbjct: 124 LIQVNISDE 132
>gi|419829037|ref|ZP_14352526.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-1A2]
gi|419831818|ref|ZP_14355285.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-61A2]
gi|419835408|ref|ZP_14358853.1| hypothetical protein VCHC46B1_0565 [Vibrio cholerae HC-46B1]
gi|421342022|ref|ZP_15792429.1| hypothetical protein VCHC43B1_0570 [Vibrio cholerae HC-43B1]
gi|422916202|ref|ZP_16950543.1| hypothetical protein VCHC02A1_0508 [Vibrio cholerae HC-02A1]
gi|423733769|ref|ZP_17706985.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-41B1]
gi|423816160|ref|ZP_17715146.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-55C2]
gi|423848224|ref|ZP_17718933.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-59A1]
gi|423878803|ref|ZP_17722541.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-60A1]
gi|423996623|ref|ZP_17739889.1| hypothetical protein VCHC02C1_0519 [Vibrio cholerae HC-02C1]
gi|424008055|ref|ZP_17751005.1| hypothetical protein VCHC44C1_0538 [Vibrio cholerae HC-44C1]
gi|424015320|ref|ZP_17755170.1| hypothetical protein VCHC55B2_0509 [Vibrio cholerae HC-55B2]
gi|424018434|ref|ZP_17758236.1| hypothetical protein VCHC59B1_0518 [Vibrio cholerae HC-59B1]
gi|424623806|ref|ZP_18062286.1| hypothetical protein VCHC50A1_0512 [Vibrio cholerae HC-50A1]
gi|424628381|ref|ZP_18066690.1| hypothetical protein VCHC51A1_0508 [Vibrio cholerae HC-51A1]
gi|424632337|ref|ZP_18070456.1| hypothetical protein VCHC52A1_0513 [Vibrio cholerae HC-52A1]
gi|424635424|ref|ZP_18073448.1| hypothetical protein VCHC55A1_0517 [Vibrio cholerae HC-55A1]
gi|424639215|ref|ZP_18077115.1| hypothetical protein VCHC56A1_0481 [Vibrio cholerae HC-56A1]
gi|424647498|ref|ZP_18085178.1| hypothetical protein VCHC57A1_0511 [Vibrio cholerae HC-57A1]
gi|443526354|ref|ZP_21092439.1| hypothetical protein VCHC78A1_00501 [Vibrio cholerae HC-78A1]
gi|341640722|gb|EGS65301.1| hypothetical protein VCHC02A1_0508 [Vibrio cholerae HC-02A1]
gi|395945525|gb|EJH56190.1| hypothetical protein VCHC43B1_0570 [Vibrio cholerae HC-43B1]
gi|408016254|gb|EKG53807.1| hypothetical protein VCHC50A1_0512 [Vibrio cholerae HC-50A1]
gi|408021369|gb|EKG58626.1| hypothetical protein VCHC52A1_0513 [Vibrio cholerae HC-52A1]
gi|408027594|gb|EKG64557.1| hypothetical protein VCHC56A1_0481 [Vibrio cholerae HC-56A1]
gi|408027672|gb|EKG64631.1| hypothetical protein VCHC55A1_0517 [Vibrio cholerae HC-55A1]
gi|408037293|gb|EKG73692.1| hypothetical protein VCHC57A1_0511 [Vibrio cholerae HC-57A1]
gi|408059203|gb|EKG93975.1| hypothetical protein VCHC51A1_0508 [Vibrio cholerae HC-51A1]
gi|408622226|gb|EKK95214.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-1A2]
gi|408631926|gb|EKL04442.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-41B1]
gi|408636831|gb|EKL08953.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-55C2]
gi|408644097|gb|EKL15803.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-60A1]
gi|408645209|gb|EKL16870.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-59A1]
gi|408652225|gb|EKL23450.1| alanine racemase, N-terminal domain protein [Vibrio cholerae
HC-61A2]
gi|408854528|gb|EKL94281.1| hypothetical protein VCHC02C1_0519 [Vibrio cholerae HC-02C1]
gi|408858821|gb|EKL98491.1| hypothetical protein VCHC46B1_0565 [Vibrio cholerae HC-46B1]
gi|408862079|gb|EKM01628.1| hypothetical protein VCHC55B2_0509 [Vibrio cholerae HC-55B2]
gi|408866342|gb|EKM05725.1| hypothetical protein VCHC44C1_0538 [Vibrio cholerae HC-44C1]
gi|408869980|gb|EKM09262.1| hypothetical protein VCHC59B1_0518 [Vibrio cholerae HC-59B1]
gi|443455347|gb|ELT19129.1| hypothetical protein VCHC78A1_00501 [Vibrio cholerae HC-78A1]
Length = 236
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVNMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|258625609|ref|ZP_05720491.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258582111|gb|EEW06978.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 236
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +A RCFGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAEQRCFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V +++ EKIA RLN PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIEREKIAVRLNEQ-RPADMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|75909109|ref|YP_323405.1| hypothetical protein Ava_2899 [Anabaena variabilis ATCC 29413]
gi|75702834|gb|ABA22510.1| Protein of unknown function UPF0001 [Anabaena variabilis ATCC
29413]
Length = 222
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFI 110
R+S PP +R++AV+K P VIR Y AG R FGEN +QE K AQL D D+ WHFI
Sbjct: 13 RASLPPS-VRLIAVTKQMPTEVIRAAYAAGVRDFGENRIQEAASKQAQLQDLPDITWHFI 71
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLVQVNTSG 165
G+LQ+NK K L + SVDN K+A RL+++ + +G P +K+L N SG
Sbjct: 72 GHLQANKAKKALE---QFQWIHSVDNLKLAQRLDQLAQQLGVNPQVCLQVKILPDPNKSG 128
Query: 166 EEYGECFIKCSWSHSC 181
E + C
Sbjct: 129 WSVPELLADLPALNQC 144
>gi|424658359|ref|ZP_18095616.1| hypothetical protein VCHE16_0512 [Vibrio cholerae HE-16]
gi|408055249|gb|EKG90187.1| hypothetical protein VCHE16_0512 [Vibrio cholerae HE-16]
Length = 236
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSTVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|343514970|ref|ZP_08752034.1| hypothetical protein VIBRN418_11370 [Vibrio sp. N418]
gi|342799114|gb|EGU34694.1| hypothetical protein VIBRN418_11370 [Vibrio sp. N418]
Length = 238
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R + ++++AVSKTKP I AG + FGENYVQE V+K
Sbjct: 8 IEQITSQISSAQQKCGRVQESVQLLAVSKTKPNQAILDAALAGQQMFGENYVQEGVDKVT 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +EWHFIG +QSNK +P+ + A V +VD KIA RLN + P
Sbjct: 68 YFSEHQPNLAIEWHFIGPIQSNKTRPV---AEHFAWVHTVDRAKIAQRLNDQRPS-DMPP 123
Query: 155 LKVLVQVNTSGEE 167
L+VL+QVNTSGE+
Sbjct: 124 LQVLIQVNTSGED 136
>gi|302386413|ref|YP_003822235.1| alanine racemase [Clostridium saccharolyticum WM1]
gi|302197041|gb|ADL04612.1| alanine racemase domain protein [Clostridium saccharolyticum WM1]
Length = 231
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 10/134 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V R+ A +R+ R P+ + ++AVSKTKP ++I + Y AG R FGEN VQE+ EK
Sbjct: 6 LEEVKSRMSAACKRAGRNPEEVTLIAVSKTKPSAMISEAYSAGVRDFGENKVQELCEKHL 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL--KV 157
LP+D+ WH IG+LQ NKVK + + ++ SVD+ ++A ++ E RK L +
Sbjct: 66 ALPEDIRWHMIGHLQRNKVKQV---IDKAVLIHSVDSVRLAVQIE---EEAARKSLVADI 119
Query: 158 LVQVNTSGEE--YG 169
L++VN + E+ YG
Sbjct: 120 LLEVNVAEEDSKYG 133
>gi|121728581|ref|ZP_01681602.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673920|ref|YP_001215987.1| hypothetical protein VC0395_A0013 [Vibrio cholerae O395]
gi|153216285|ref|ZP_01950378.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|227116864|ref|YP_002818760.1| hypothetical protein VC395_0505 [Vibrio cholerae O395]
gi|262167145|ref|ZP_06034859.1| hypothetical protein VIJ_000305 [Vibrio cholerae RC27]
gi|297580600|ref|ZP_06942526.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|121629137|gb|EAX61580.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124114374|gb|EAY33194.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|146315803|gb|ABQ20342.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227012314|gb|ACP08524.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262024445|gb|EEY43132.1| hypothetical protein VIJ_000305 [Vibrio cholerae RC27]
gi|297535016|gb|EFH73851.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 236
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|152978475|ref|YP_001344104.1| alanine racemase domain-containing protein [Actinobacillus
succinogenes 130Z]
gi|150840198|gb|ABR74169.1| alanine racemase domain protein [Actinobacillus succinogenes 130Z]
Length = 232
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 81/131 (61%), Gaps = 9/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L + Q++ QA + R ++++AVSKTKPV+ I+ +AG R FGENYVQE VEK
Sbjct: 7 LEHIHQQIGQACLAAGRDKSAVKLLAVSKTKPVTDIQAAIDAGQRAFGENYVQEGVEKIQ 66
Query: 98 --AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
A + P +LEWHFIG LQSNK + L+A ++++D KIA RLN + PL
Sbjct: 67 FFAHKYP-ELEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNDQ-RPADKAPL 121
Query: 156 KVLVQVNTSGE 166
VL+Q+N S E
Sbjct: 122 NVLIQINISDE 132
>gi|121590705|ref|ZP_01678037.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153819160|ref|ZP_01971827.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153826571|ref|ZP_01979238.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227080671|ref|YP_002809222.1| hypothetical protein VCM66_0446 [Vibrio cholerae M66-2]
gi|229507099|ref|ZP_04396605.1| hypothetical protein VCF_002321 [Vibrio cholerae BX 330286]
gi|298501008|ref|ZP_07010809.1| YggS family pyridoxal phosphate enzyme [Vibrio cholerae MAK 757]
gi|121547436|gb|EAX57545.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|126510305|gb|EAZ72899.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|149739663|gb|EDM53877.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227008559|gb|ACP04771.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229355844|gb|EEO20764.1| hypothetical protein VCF_002321 [Vibrio cholerae BX 330286]
gi|297540256|gb|EFH76316.1| YggS family pyridoxal phosphate enzyme [Vibrio cholerae MAK 757]
Length = 236
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|254226314|ref|ZP_04919905.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125621176|gb|EAZ49519.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 236
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|375133780|ref|YP_004994430.1| hypothetical protein BDGL_000162 [Acinetobacter calcoaceticus
PHEA-2]
gi|325121225|gb|ADY80748.1| conserved hypothetical protein [Acinetobacter calcoaceticus PHEA-2]
Length = 230
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIQTACEHAQRAPETVQLLAVSKTHPSESLREMYAAGQRAFGENYLQEALDKV 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 EALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RGNDQSALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|303250530|ref|ZP_07336727.1| hypothetical protein APP6_0100 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251874|ref|ZP_07338045.1| hypothetical protein APP2_0195 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247027|ref|ZP_07529081.1| hypothetical protein appser2_260 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251572|ref|ZP_07533479.1| hypothetical protein appser6_960 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649304|gb|EFL79489.1| hypothetical protein APP2_0195 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650518|gb|EFL80677.1| hypothetical protein APP6_0100 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306856479|gb|EFM88628.1| hypothetical protein appser2_260 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306861036|gb|EFM93042.1| hypothetical protein appser6_960 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 227
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIEEAIAAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGALQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K + L+A N +++VD KIA RL+ + + PL VL+Q+N S E
Sbjct: 84 KTR-LVA--ENFDWIQTVDRLKIAERLSAQ-RSANKAPLNVLIQINISDE 129
>gi|17227982|ref|NP_484530.1| hypothetical protein alr0486 [Nostoc sp. PCC 7120]
gi|17129831|dbj|BAB72444.1| alr0486 [Nostoc sp. PCC 7120]
Length = 222
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 13/149 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ S+ +R+ Q R+S PP +R++AV+K P VIR Y AG R FGEN +QE K A
Sbjct: 2 ISSINERITQI--RASLPPS-VRLIAVTKQMPTEVIRAAYAAGIRDFGENRIQEAASKKA 58
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP--- 154
QL D D+ WHFIG+LQ+NK K L + SVDN K+A RL+++ + +G P
Sbjct: 59 QLHDLPDITWHFIGHLQANKAKKALE---QFQWIHSVDNLKLAQRLDQLAQQLGVNPQVC 115
Query: 155 --LKVLVQVNTSGEEYGECFIKCSWSHSC 181
+K+L N SG E + C
Sbjct: 116 LQVKILPDPNKSGWTVPELLTDLPALNHC 144
>gi|427426280|ref|ZP_18916341.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-136]
gi|425696912|gb|EKU66607.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-136]
Length = 230
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIQSACEHAQRAPETVQLLAVSKTHPSESLREMYAAGQRAFGENYLQEALDKV 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 EALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RGDDQSALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|443472278|ref|ZP_21062307.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Pseudomonas
pseudoalcaligenes KF707]
gi|442902620|gb|ELS28136.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial PROSC like protein [Pseudomonas
pseudoalcaligenes KF707]
Length = 230
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ S R + ++AVSKTKP + IR+ + G FGENY+QE + K A+L D D
Sbjct: 14 RIREAAQASGREHSSVGLLAVSKTKPAAAIREAFACGVTDFGENYLQEALAKQAELGDLD 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
L WHFIG +QSNK K + + V SVD KIA RL+ PL V +QVN S
Sbjct: 74 LTWHFIGPIQSNKTKAI---AEHFHWVHSVDRLKIAERLSAQ-RPPALPPLNVCLQVNVS 129
Query: 165 GE 166
GE
Sbjct: 130 GE 131
>gi|417819346|ref|ZP_12465963.1| hypothetical protein VCHE39_0821 [Vibrio cholerae HE39]
gi|423946500|ref|ZP_17733408.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-40]
gi|423975659|ref|ZP_17736957.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-46]
gi|340041202|gb|EGR02169.1| hypothetical protein VCHE39_0821 [Vibrio cholerae HE39]
gi|408662112|gb|EKL33084.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-40]
gi|408666196|gb|EKL36993.1| alanine racemase, N-terminal domain protein [Vibrio cholerae HE-46]
Length = 236
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVDMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|386320648|ref|YP_006016810.1| hypothetical protein RIA_0284 [Riemerella anatipestifer RA-GD]
gi|325335191|gb|ADZ11465.1| Predicted enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-GD]
Length = 234
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S+ P + +VAVSKT PV I++VY GH+ FGEN VQE+V K +LP D++WH IG+LQ
Sbjct: 28 SQIPKTVNLVAVSKTYPVEDIQKVYNLGHKVFGENKVQELVAKHTELPSDIQWHLIGHLQ 87
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+NKVK + P + ++SVD+EK+ +++ R + +L+QV + E+
Sbjct: 88 TNKVKYI---APFIHTIQSVDSEKLLQEIDKQAGKHKR-LINILLQVKIAEED 136
>gi|260222645|emb|CBA32411.1| UPF0001 protein PA0394 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 250
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ QA +S RP D +R++AVSKT ++Q ++AG R FGENY+QE V+K +
Sbjct: 26 LHAVAQRIAQACTQSGRPADSVRLLAVSKTFGPDAVQQAFDAGQRAFGENYIQEAVDKIS 85
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L +EWH IG +QSNK + L+A + V++VD KIA RL+ PL+V
Sbjct: 86 ALSALPIEWHCIGPIQSNKTR-LVA--EHFQWVQTVDRLKIAQRLSDQ-RPPHLPPLQVC 141
Query: 159 VQVNTSG 165
+QVN G
Sbjct: 142 IQVNVDG 148
>gi|268317716|ref|YP_003291435.1| alanine racemase domain-containing protein [Rhodothermus marinus
DSM 4252]
gi|345302577|ref|YP_004824479.1| hypothetical protein Rhom172_0706 [Rhodothermus marinus
SG0.5JP17-172]
gi|262335250|gb|ACY49047.1| alanine racemase domain protein [Rhodothermus marinus DSM 4252]
gi|345111810|gb|AEN72642.1| protein of unknown function UPF0001 [Rhodothermus marinus
SG0.5JP17-172]
Length = 244
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 9/127 (7%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD 104
+R+ +A R+ R PD + ++ V+KT PV+V++ YEAG R FGEN VQE+V KAA LP
Sbjct: 21 ERIERACRRAGRSPDEVTLIGVTKTFPVAVVQAAYEAGLRHFGENRVQELVAKAAVLPGR 80
Query: 105 LE-----WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
+E WH IG+LQ NK + ++A + + S+DN ++A L R M + L V
Sbjct: 81 IEGGEVTWHMIGHLQRNKARDVVA---HADWLHSLDNLRLAETLERRA-AMADRVLPCFV 136
Query: 160 QVNTSGE 166
+VN SGE
Sbjct: 137 EVNVSGE 143
>gi|153840601|ref|ZP_01993268.1| conserved hypothetical protein, partial [Vibrio parahaemolyticus
AQ3810]
gi|149745736|gb|EDM56866.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
Length = 214
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 9/110 (8%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNK 117
++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSNK
Sbjct: 1 LLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNK 60
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+ L+A + V ++D KIA RLN KPL+VL+QVNTSGE+
Sbjct: 61 SR-LVA--EHFDWVHTIDRAKIAQRLNEQ-RPQELKPLQVLIQVNTSGED 106
>gi|22127203|ref|NP_670626.1| hypothetical protein y3327 [Yersinia pestis KIM10+]
gi|45443239|ref|NP_994778.1| hypothetical protein YP_3501 [Yersinia pestis biovar Microtus str.
91001]
gi|162421828|ref|YP_001604768.1| hypothetical protein YpAngola_A0138 [Yersinia pestis Angola]
gi|165924910|ref|ZP_02220742.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937218|ref|ZP_02225782.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010377|ref|ZP_02231275.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166212690|ref|ZP_02238725.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399806|ref|ZP_02305324.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421909|ref|ZP_02313662.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426713|ref|ZP_02318466.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|270487539|ref|ZP_06204613.1| pyridoxal phosphate enzyme, YggS family [Yersinia pestis KIM D27]
gi|21960269|gb|AAM86877.1|AE013933_14 hypothetical protein y3327 [Yersinia pestis KIM10+]
gi|45438107|gb|AAS63655.1| Predicted enzyme with a TIM-barrel fold [Yersinia pestis biovar
Microtus str. 91001]
gi|162354643|gb|ABX88591.1| conserved hypothetical protein TIGR00044 [Yersinia pestis Angola]
gi|165914692|gb|EDR33305.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923110|gb|EDR40261.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990863|gb|EDR43164.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205982|gb|EDR50462.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166960046|gb|EDR56067.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050514|gb|EDR61922.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054316|gb|EDR64135.1| conserved hypothetical protein TIGR00044 [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|270336043|gb|EFA46820.1| pyridoxal phosphate enzyme, YggS family [Yersinia pestis KIM D27]
Length = 242
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V R+ AA R P+ + ++AVSKTKPV+ I + AG FGENYVQE V+K
Sbjct: 18 LQDVRARIATAAHNCGRSPEEVTLLAVSKTKPVAAIEKAIAAGQYAFGENYVQEGVDKIH 77
Query: 100 QLPDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D+ LEWHFIG LQSNK + L+A N A +VD KIA RL+ L V
Sbjct: 78 SFVDNKTLEWHFIGPLQSNKSR-LVA--ENFAWCHTVDRLKIAQRLSAQ-RPAAMPALNV 133
Query: 158 LVQVNTSGEE 167
L+Q+N S E+
Sbjct: 134 LIQINISDEQ 143
>gi|319638710|ref|ZP_07993469.1| hypothetical protein HMPREF0604_01093 [Neisseria mucosa C102]
gi|317399951|gb|EFV80613.1| hypothetical protein HMPREF0604_01093 [Neisseria mucosa C102]
Length = 232
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
R V + V QAAE + RP D +++VAVSKT P IR+VY AG R FGENY+QE EK
Sbjct: 9 RDVCRAVEQAAEAAGRPADAVKLVAVSKTFPADDIREVYAAGQRDFGENYIQEWFEKTET 68
Query: 101 LPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D D+ WH IG++QSNK K + V ++ K A RL+ + PL+V
Sbjct: 69 LADLPDIVWHVIGDVQSNKTKFV---AERAHWVHTIGRLKTARRLSEQRPSE-MPPLQVC 124
Query: 159 VQVNTSGEE 167
++VN + EE
Sbjct: 125 IEVNIAAEE 133
>gi|187736250|ref|YP_001878362.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
gi|187426302|gb|ACD05581.1| alanine racemase domain protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 231
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ R+ A R+ RP +R+VAVSKT P ++ ++AG R FGEN VQE + K
Sbjct: 7 LEHILSRIRAAELRAGRPAGSVRLVAVSKTFPAEDVKACHDAGQRIFGENKVQEGLGKIP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP D EWH IG LQ NKV+ L ++ +VD+ ++A ++ + + G++P ++L+
Sbjct: 67 SLPPDTEWHLIGPLQRNKVRKALE---YFTLIHAVDSLRLARFMDTVAQETGKRP-RILL 122
Query: 160 QVNTSGEEYGECFI 173
+VN E+ F
Sbjct: 123 EVNVGNEDSKFGFF 136
>gi|15595591|ref|NP_249085.1| hypothetical protein PA0394 [Pseudomonas aeruginosa PAO1]
gi|218889136|ref|YP_002438000.1| putative PLP dependent enzyme [Pseudomonas aeruginosa LESB58]
gi|254237371|ref|ZP_04930694.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243494|ref|ZP_04936816.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296386893|ref|ZP_06876392.1| putative PLP dependent enzyme [Pseudomonas aeruginosa PAb1]
gi|313111985|ref|ZP_07797772.1| hypothetical protein PA39016_004070007 [Pseudomonas aeruginosa
39016]
gi|386068696|ref|YP_005984000.1| hypothetical protein NCGM2_5804 [Pseudomonas aeruginosa NCGM2.S1]
gi|416857320|ref|ZP_11912651.1| putative PLP dependent enzyme [Pseudomonas aeruginosa 138244]
gi|416875949|ref|ZP_11918983.1| putative PLP dependent enzyme [Pseudomonas aeruginosa 152504]
gi|418588386|ref|ZP_13152398.1| putative PLP dependent enzyme [Pseudomonas aeruginosa MPAO1/P1]
gi|418593464|ref|ZP_13157309.1| putative PLP dependent enzyme [Pseudomonas aeruginosa MPAO1/P2]
gi|421151459|ref|ZP_15611073.1| hypothetical protein PABE171_0416 [Pseudomonas aeruginosa ATCC
14886]
gi|421165256|ref|ZP_15623595.1| hypothetical protein PABE177_0418 [Pseudomonas aeruginosa ATCC
700888]
gi|421178304|ref|ZP_15635919.1| hypothetical protein PAE2_0365 [Pseudomonas aeruginosa E2]
gi|421515010|ref|ZP_15961696.1| hypothetical protein A161_02020 [Pseudomonas aeruginosa PAO579]
gi|424943189|ref|ZP_18358952.1| putative PLP dependent enzyme [Pseudomonas aeruginosa NCMG1179]
gi|451983837|ref|ZP_21932106.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial homolog PROSC [Pseudomonas aeruginosa 18A]
gi|141308|sp|P24562.1|Y394_PSEAE RecName: Full=UPF0001 protein PA0394
gi|9946247|gb|AAG03783.1|AE004476_13 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|454838|gb|AAA25959.1| ORF 6; putative [Pseudomonas aeruginosa PAO1]
gi|126169302|gb|EAZ54813.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196872|gb|EAZ60935.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769359|emb|CAW25119.1| putative PLP dependent enzyme [Pseudomonas aeruginosa LESB58]
gi|310884274|gb|EFQ42868.1| hypothetical protein PA39016_004070007 [Pseudomonas aeruginosa
39016]
gi|334840786|gb|EGM19431.1| putative PLP dependent enzyme [Pseudomonas aeruginosa 138244]
gi|334841414|gb|EGM20044.1| putative PLP dependent enzyme [Pseudomonas aeruginosa 152504]
gi|346059635|dbj|GAA19518.1| putative PLP dependent enzyme [Pseudomonas aeruginosa NCMG1179]
gi|348037255|dbj|BAK92615.1| hypothetical protein NCGM2_5804 [Pseudomonas aeruginosa NCGM2.S1]
gi|375040782|gb|EHS33514.1| putative PLP dependent enzyme [Pseudomonas aeruginosa MPAO1/P1]
gi|375047555|gb|EHS40099.1| putative PLP dependent enzyme [Pseudomonas aeruginosa MPAO1/P2]
gi|404348738|gb|EJZ75075.1| hypothetical protein A161_02020 [Pseudomonas aeruginosa PAO579]
gi|404527363|gb|EKA37527.1| hypothetical protein PABE171_0416 [Pseudomonas aeruginosa ATCC
14886]
gi|404542474|gb|EKA51792.1| hypothetical protein PABE177_0418 [Pseudomonas aeruginosa ATCC
700888]
gi|404548634|gb|EKA57581.1| hypothetical protein PAE2_0365 [Pseudomonas aeruginosa E2]
gi|451758489|emb|CCQ84629.1| Hypothetical protein YggS, proline synthase co-transcribed
bacterial homolog PROSC [Pseudomonas aeruginosa 18A]
gi|453045773|gb|EME93491.1| hypothetical protein H123_13235 [Pseudomonas aeruginosa PA21_ST175]
Length = 230
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L
Sbjct: 11 VAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QV
Sbjct: 71 DLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|343510792|ref|ZP_08747999.1| hypothetical protein VIS19158_11194 [Vibrio scophthalmi LMG 19158]
gi|342800859|gb|EGU36365.1| hypothetical protein VIS19158_11194 [Vibrio scophthalmi LMG 19158]
Length = 238
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R + ++++AVSKTKP I AG + FGENYVQE V+K
Sbjct: 8 IEQITSQISSAQQKCGRVQESVQLLAVSKTKPNQAILDAALAGQQMFGENYVQEGVDKVT 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ +EWHFIG +QSNK +P+ + A V +VD KIA RLN + P
Sbjct: 68 YFSEHQPNLAIEWHFIGPIQSNKTRPV---AEHFAWVHTVDRAKIAQRLNDQRPS-DMPP 123
Query: 155 LKVLVQVNTSGEE 167
L+VL+QVNTSGE+
Sbjct: 124 LQVLIQVNTSGED 136
>gi|325103660|ref|YP_004273314.1| alanine racemase [Pedobacter saltans DSM 12145]
gi|324972508|gb|ADY51492.1| alanine racemase domain protein [Pedobacter saltans DSM 12145]
Length = 236
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
++++AVSKTKPV I + Y AG R FGEN VQE+ EK A LP D++WH IG+LQ+NKVK
Sbjct: 19 VKLIAVSKTKPVEDILEAYNAGQRIFGENQVQEMAEKEASLPKDIQWHLIGHLQTNKVKY 78
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+ P ++++ SVD+ K+ +N+ E R + L+Q+ + E+ +G F
Sbjct: 79 I---APFVSLIHSVDSIKLLKEINKYAEKNNR-IIDCLLQIYIADEDTKFGLGF 128
>gi|152986073|ref|YP_001345889.1| hypothetical protein PSPA7_0494 [Pseudomonas aeruginosa PA7]
gi|452879372|ref|ZP_21956483.1| hypothetical protein G039_23348 [Pseudomonas aeruginosa VRFPA01]
gi|150961231|gb|ABR83256.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452184064|gb|EME11082.1| hypothetical protein G039_23348 [Pseudomonas aeruginosa VRFPA01]
Length = 230
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L
Sbjct: 11 VAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL + +QV
Sbjct: 71 DLSLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNICLQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|342879873|gb|EGU81106.1| hypothetical protein FOXB_08380 [Fusarium oxysporum Fo5176]
Length = 263
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 82/135 (60%), Gaps = 13/135 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEIVEK 97
L SV +R+ AA + R ++R+VAVSK KPV+ I +++A H FGENY QE+ +K
Sbjct: 22 LSSVKERI--AAVANGR---KVRLVAVSKLKPVNDILALHQAPTSHTHFGENYSQELTQK 76
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRM-VETMGRKP-- 154
AA LP ++WHFIG LQS+ K L +PNL V S+D K A LN + +P
Sbjct: 77 AALLPKTIQWHFIGGLQSSHCKS-LGKIPNLFCVSSIDTSKKAQLLNTARTNLLSSQPDL 135
Query: 155 --LKVLVQVNTSGEE 167
+ V VQVNTSGEE
Sbjct: 136 DKIGVHVQVNTSGEE 150
>gi|312131524|ref|YP_003998864.1| alanine racemase [Leadbetterella byssophila DSM 17132]
gi|311908070|gb|ADQ18511.1| alanine racemase domain protein [Leadbetterella byssophila DSM
17132]
Length = 217
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 5/122 (4%)
Query: 51 AERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFI 110
A R PP + ++AVSK KPV+ + + Y G R FGENYVQE+VEK + LP D+ WHFI
Sbjct: 9 ALRQEIPPS-VDLIAVSKFKPVADLEEAYACGQRDFGENYVQELVEKESALPKDVRWHFI 67
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGE 170
G+LQ+NKVK + P + ++ SVD+ K+ + + + GR + VL+Q + + EE
Sbjct: 68 GHLQTNKVKYI---APFVHLIHSVDSLKLLKEIQKQGASKGR-IISVLLQAHIAEEESKT 123
Query: 171 CF 172
F
Sbjct: 124 GF 125
>gi|261346263|ref|ZP_05973907.1| pyridoxal phosphate enzyme, YggS family [Providencia rustigianii
DSM 4541]
gi|282565572|gb|EFB71107.1| pyridoxal phosphate enzyme, YggS family [Providencia rustigianii
DSM 4541]
Length = 230
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R++ AA R P I ++AVSKTKP I + +AG R FGENYVQE VEK
Sbjct: 10 VTARINLAATECHRSPQEITLLAVSKTKPCEAILEAIDAGLRQFGENYVQEGVEKIQYFA 69
Query: 103 D--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
D DL WHFIG LQSNK + L+A + ++D KIA RLN + PL VL+Q
Sbjct: 70 DRTDLVWHFIGPLQSNKSR-LVA--EHFDWFHTLDRAKIAQRLNEQ-RPQNKAPLNVLIQ 125
Query: 161 VNTSGE 166
+N S E
Sbjct: 126 INISDE 131
>gi|327314522|ref|YP_004329959.1| pyridoxal phosphate enzyme, YggS family [Prevotella denticola
F0289]
gi|326944751|gb|AEA20636.1| pyridoxal phosphate enzyme, YggS family [Prevotella denticola
F0289]
Length = 223
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
PD +R+VA+SK PV I Y G R FGE+ QE+ K LP D+EWHFIG+LQ+NK
Sbjct: 16 PDGVRLVAISKFHPVEYIEAAYHEGQRVFGESQEQELARKVESLPKDIEWHFIGHLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + P ++M+E+VD+ K+ +N+ GR + VL++++ + EE YG C
Sbjct: 76 VKYI---APYISMIEAVDSLKLLKEINKQAARYGR-VINVLLELHIAEEESKYGFTPAAC 131
>gi|307262633|ref|ZP_07544263.1| hypothetical protein appser13_620 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306872056|gb|EFN03770.1| hypothetical protein appser13_620 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 227
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIEEAIAAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGPLQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K + L+A N +++VD KIA RL+ + + + PL VL+Q+N S E
Sbjct: 84 KTR-LVA--ENFDWIQTVDRLKIAERLS-VQRSANKAPLNVLIQINISDE 129
>gi|190149320|ref|YP_001967845.1| hypothetical protein APP7_0051 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307244852|ref|ZP_07526951.1| hypothetical protein appser1_660 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253806|ref|ZP_07535660.1| hypothetical protein appser9_660 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258262|ref|ZP_07540005.1| hypothetical protein appser11_670 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|189914451|gb|ACE60703.1| hypothetical protein APP7_0051 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306854297|gb|EFM86503.1| hypothetical protein appser1_660 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863290|gb|EFM95230.1| hypothetical protein appser9_660 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867722|gb|EFM99567.1| hypothetical protein appser11_670 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 227
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIEEAIAAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGPLQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K + L+A N +++VD KIA RL+ + + + PL VL+Q+N S E
Sbjct: 84 KTR-LVA--ENFDWIQTVDRLKIAERLS-VQRSANKAPLNVLIQINISDE 129
>gi|420136971|ref|ZP_14644977.1| hypothetical protein PACIG1_0476 [Pseudomonas aeruginosa CIG1]
gi|421157397|ref|ZP_15616776.1| hypothetical protein PABE173_0405 [Pseudomonas aeruginosa ATCC
25324]
gi|403250276|gb|EJY63726.1| hypothetical protein PACIG1_0476 [Pseudomonas aeruginosa CIG1]
gi|404550658|gb|EKA59385.1| hypothetical protein PABE173_0405 [Pseudomonas aeruginosa ATCC
25324]
Length = 230
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L
Sbjct: 11 VAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QV
Sbjct: 71 DLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|319643711|ref|ZP_07998327.1| hypothetical protein HMPREF9011_03929 [Bacteroides sp. 3_1_40A]
gi|345521375|ref|ZP_08800702.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 4_3_47FAA]
gi|423314184|ref|ZP_17292119.1| YggS family pyridoxal phosphate enzyme [Bacteroides vulgatus
CL09T03C04]
gi|254834537|gb|EET14846.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 4_3_47FAA]
gi|317384653|gb|EFV65616.1| hypothetical protein HMPREF9011_03929 [Bacteroides sp. 3_1_40A]
gi|392683782|gb|EIY77116.1| YggS family pyridoxal phosphate enzyme [Bacteroides vulgatus
CL09T03C04]
Length = 222
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P +R+VAVSK P + + Y AG R FGE++VQE+ +K LP D+EWHFIG+LQ
Sbjct: 12 SELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NKVK + P +AM+ ++D+ K+ +N+ + R + L+Q++ + EE +G F
Sbjct: 72 TNKVKYM---APYVAMIHAIDSYKLLVEVNKQASKVHR-VIPCLLQIHIAQEETKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|225567964|ref|ZP_03776989.1| hypothetical protein CLOHYLEM_04037 [Clostridium hylemonae DSM
15053]
gi|225163252|gb|EEG75871.1| hypothetical protein CLOHYLEM_04037 [Clostridium hylemonae DSM
15053]
Length = 231
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V +R+ A ER+ R + ++AVSKTKPV +R+ Y G R FGEN VQE+V+K
Sbjct: 6 LENVEERIRAACERAGRNRSEVTLIAVSKTKPVETLREAYGLGVRVFGENKVQELVDKYG 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
LP+D+ WH IG+LQ NKVK + + ++ SVD+ ++A + + E +L+
Sbjct: 66 ALPEDIHWHMIGHLQRNKVKYI---IDKAELIHSVDSLRLAETIEKEAEKHNITA-NILI 121
Query: 160 QVNTSGEE 167
+VN + EE
Sbjct: 122 EVNVAREE 129
>gi|321475478|gb|EFX86441.1| hypothetical protein DAPPUDRAFT_313114 [Daphnia pulex]
Length = 316
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 14/140 (10%)
Query: 35 VAATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEI 94
V A + + ++RV +AA + + P +VAVSKTKPV + + Y G R FGENY+ E+
Sbjct: 14 VKAKMMAASLKRVQEAA--AFKAP---TLVAVSKTKPVDDVIEAYHGGQRHFGENYIPEL 68
Query: 95 VEKAA------QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR-MV 147
K+ + P D+ WH IG+LQSNK+K LA V NL MVE++D+ KIA LN+ +
Sbjct: 69 GGKSTDPKILEECP-DIRWHMIGHLQSNKMKK-LASVQNLYMVETIDSVKIADALNKSWI 126
Query: 148 ETMGRKPLKVLVQVNTSGEE 167
+ + LKV+VQV TS EE
Sbjct: 127 KLNKMEKLKVMVQVKTSDEE 146
>gi|423240348|ref|ZP_17221463.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
CL03T12C01]
gi|392644449|gb|EIY38188.1| YggS family pyridoxal phosphate enzyme [Bacteroides dorei
CL03T12C01]
Length = 222
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P +R+VAVSK P + + Y AG R FGE++VQE+ +K LP D+EWHFIG+LQ
Sbjct: 12 SELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NKVK + P +AM+ ++D+ K+ +N+ + R + L+Q++ + EE +G F
Sbjct: 72 TNKVKYM---APYVAMIHAIDSYKLLVEVNKQASKVHR-VIPCLLQIHIAQEETKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|300313097|ref|YP_003777189.1| enzyme with a TIM-barrel fold protein [Herbaspirillum seropedicae
SmR1]
gi|300075882|gb|ADJ65281.1| enzyme with a TIM-barrel fold protein [Herbaspirillum seropedicae
SmR1]
Length = 233
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V Q++ AAER+ RP ++++AVSKT + + AG R FGENY+QE +EK A
Sbjct: 8 LQHVQQQIAAAAERAGRPAGAVQLLAVSKTFGPQAVLEAVRAGQRAFGENYLQEALEKIA 67
Query: 100 QLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
LP L+WHFIG +QSNK +P+ + V SVD KIA RL+
Sbjct: 68 ALPLLAPDVPLQWHFIGPIQSNKTRPI---AEHFDWVHSVDRLKIAQRLSEQ-RPAALGA 123
Query: 155 LKVLVQVNTSGEE 167
L V +QVN SGE+
Sbjct: 124 LNVCLQVNISGED 136
>gi|224024555|ref|ZP_03642921.1| hypothetical protein BACCOPRO_01281 [Bacteroides coprophilus DSM
18228]
gi|224017777|gb|EEF75789.1| hypothetical protein BACCOPRO_01281 [Bacteroides coprophilus DSM
18228]
Length = 222
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I Y+AG R FGE+ VQE+ EK LP D+EWHFIG+LQ+NK
Sbjct: 15 PSGVRLVAVSKFHPNECIEAAYQAGQRIFGESKVQELTEKYQTLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + P ++M+ +VD+ K+ +N+ + R + L++++ + EE YG F C
Sbjct: 75 VKYI---APFISMIHAVDSFKLLEEINKQASKVNR-IIPCLLEIHIAQEESKYGFTFESC 130
>gi|167036133|ref|YP_001671364.1| alanine racemase domain-containing protein [Pseudomonas putida
GB-1]
gi|166862621|gb|ABZ01029.1| alanine racemase domain protein [Pseudomonas putida GB-1]
Length = 228
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNL 113
R P ++++AVSKTKP S IR+++ AG R FGENY+QE + K +L D L WHFIG +
Sbjct: 23 GRDPASVQLLAVSKTKPASAIREIHTAGVRDFGENYLQEALTKQQELSDLPLIWHFIGPI 82
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
QSNK K + + V SVD KIA RL+ G PL + +QVN SGE+
Sbjct: 83 QSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNLCLQVNVSGED 132
>gi|327405566|ref|YP_004346404.1| hypothetical protein Fluta_3597 [Fluviicola taffensis DSM 16823]
gi|327321074|gb|AEA45566.1| protein of unknown function UPF0001 [Fluviicola taffensis DSM
16823]
Length = 220
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 77/117 (65%), Gaps = 6/117 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P + +VAVSKTKP +++++ Y+AG R FGEN VQE+V+K LP D+EWH IG+LQ+NK
Sbjct: 15 PKDVVLVAVSKTKPAALVQEAYDAGQRVFGENKVQELVDKWEVLPKDIEWHLIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
VK + P ++++ SVD+ K+ +N+ E R + L+Q + + EE +G F
Sbjct: 75 VKFI---APFVSLIHSVDSFKLLQEINKQGEKNNR-IIPCLLQFHIAQEETKFGFSF 127
>gi|90407098|ref|ZP_01215287.1| putative alanine racemase [Psychromonas sp. CNPT3]
gi|90311820|gb|EAS39916.1| putative alanine racemase [Psychromonas sp. CNPT3]
Length = 232
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 10/128 (7%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD 104
Q++ AA ++ R ++++AVSKTKPV+ I++ Y AG R FGENYVQE +EK + DD
Sbjct: 13 QQIEHAAVQAGRTTLDVQLLAVSKTKPVAQIKEAYMAGQRLFGENYVQESIEKIQLIKDD 72
Query: 105 LE------WHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
W+FIG LQSNK + L+A N V+SVD KIA RL+ T PL +
Sbjct: 73 CSFNDPICWYFIGPLQSNKTR-LVA--ENFDWVQSVDRFKIAQRLSAQRPT-NLTPLNIC 128
Query: 159 VQVNTSGE 166
+Q+N S E
Sbjct: 129 LQINISAE 136
>gi|148550169|ref|YP_001270271.1| alanine racemase domain-containing protein [Pseudomonas putida F1]
gi|148514227|gb|ABQ81087.1| alanine racemase domain protein [Pseudomonas putida F1]
Length = 228
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNL 113
R P ++++AVSKTKP S IR+++ AG R FGENY+QE + K L D L WHFIG +
Sbjct: 23 GRDPASVQLLAVSKTKPASAIREIHAAGVRDFGENYLQEALTKQQALSDLPLIWHFIGPI 82
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
QSNK K + + V SVD KIA RL+ G PL + +QVN SGE+
Sbjct: 83 QSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGED 132
>gi|395445968|ref|YP_006386221.1| alanine racemase domain-containing protein [Pseudomonas putida ND6]
gi|397692936|ref|YP_006530816.1| alanine racemase domain-containing protein [Pseudomonas putida
DOT-T1E]
gi|388559965|gb|AFK69106.1| alanine racemase domain-containing protein [Pseudomonas putida ND6]
gi|397329666|gb|AFO46025.1| alanine racemase domain-containing protein [Pseudomonas putida
DOT-T1E]
Length = 228
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNL 113
R P ++++AVSKTKP S IR+++ AG R FGENY+QE + K L D L WHFIG +
Sbjct: 23 GRDPASVQLLAVSKTKPASAIREIHAAGVRDFGENYLQEALTKQQALSDLPLIWHFIGPI 82
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
QSNK K + + V SVD KIA RL+ G PL + +QVN SGE+
Sbjct: 83 QSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGED 132
>gi|354566615|ref|ZP_08985787.1| protein of unknown function UPF0001 [Fischerella sp. JSC-11]
gi|353545631|gb|EHC15082.1| protein of unknown function UPF0001 [Fischerella sp. JSC-11]
Length = 223
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFI 110
R+ PP +R++AV+K P VIR Y AG R FGEN +QE + K A+L D D+ WHFI
Sbjct: 13 RAQLPPS-VRLIAVTKQVPSDVIRAAYTAGIRDFGENRIQEAIAKQAELQDLSDITWHFI 71
Query: 111 GNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLVQVNTSG 165
G+LQSNK K L N + SVDN K+A RLN + + +G P +K+L N SG
Sbjct: 72 GHLQSNKAKKALE---NFQWIHSVDNLKLAQRLNELAQQIGISPCVCLQVKILPDPNKSG 128
>gi|313207350|ref|YP_004046527.1| alanine racemase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383484719|ref|YP_005393631.1| alanine racemase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|416110322|ref|ZP_11591937.1| hypothetical protein RAYM_08700 [Riemerella anatipestifer RA-YM]
gi|442315382|ref|YP_007356685.1| putative enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-CH-2]
gi|312446666|gb|ADQ83021.1| alanine racemase domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023245|gb|EFT36255.1| hypothetical protein RAYM_08700 [Riemerella anatipestifer RA-YM]
gi|380459404|gb|AFD55088.1| alanine racemase domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441484305|gb|AGC40991.1| putative enzyme with a TIM-barrel fold [Riemerella anatipestifer
RA-CH-2]
Length = 218
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S+ P + +VAVSKT PV I++VY GH+ FGEN VQE+V K +LP D++WH IG+LQ
Sbjct: 12 SQIPKTVNLVAVSKTYPVEDIQKVYNLGHKVFGENKVQELVAKHTELPSDIQWHLIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+NKVK + P + ++SVD+EK+ +++ R + +L+QV + E+
Sbjct: 72 TNKVKYI---APFIHTIQSVDSEKLLQEIDKQAGKHKR-LINILLQVKIAEED 120
>gi|108806321|ref|YP_650237.1| hypothetical protein YPA_0324 [Yersinia pestis Antiqua]
gi|108813298|ref|YP_649065.1| hypothetical protein YPN_3138 [Yersinia pestis Nepal516]
gi|145597881|ref|YP_001161957.1| hypothetical protein YPDSF_0574 [Yersinia pestis Pestoides F]
gi|149367050|ref|ZP_01889083.1| hypothetical protein YPE_2328 [Yersinia pestis CA88-4125]
gi|167468160|ref|ZP_02332864.1| hypothetical protein YpesF_09734 [Yersinia pestis FV-1]
gi|170023081|ref|YP_001719586.1| alanine racemase domain-containing protein [Yersinia
pseudotuberculosis YPIII]
gi|218928113|ref|YP_002345988.1| hypothetical protein YPO0941 [Yersinia pestis CO92]
gi|229837634|ref|ZP_04457796.1| predicted enzyme [Yersinia pestis Pestoides A]
gi|229840860|ref|ZP_04461019.1| predicted enzyme [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842579|ref|ZP_04462734.1| predicted enzyme [Yersinia pestis biovar Orientalis str. India 195]
gi|229903761|ref|ZP_04518874.1| predicted enzyme [Yersinia pestis Nepal516]
gi|384137064|ref|YP_005519766.1| hypothetical protein A1122_00300 [Yersinia pestis A1122]
gi|384413473|ref|YP_005622835.1| hypothetical protein YPC_0859 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420610223|ref|ZP_15101743.1| hypothetical protein YPPY13_1142 [Yersinia pestis PY-13]
gi|420626002|ref|ZP_15115796.1| hypothetical protein YPPY16_1149 [Yersinia pestis PY-16]
gi|420673766|ref|ZP_15158911.1| hypothetical protein YPPY46_1098 [Yersinia pestis PY-46]
gi|420706933|ref|ZP_15187799.1| hypothetical protein YPPY55_1117 [Yersinia pestis PY-55]
gi|420777252|ref|ZP_15249680.1| hypothetical protein YPPY88_1085 [Yersinia pestis PY-88]
gi|420804111|ref|ZP_15273614.1| hypothetical protein YPPY93_1147 [Yersinia pestis PY-93]
gi|420815077|ref|ZP_15283492.1| hypothetical protein YPPY95_1158 [Yersinia pestis PY-95]
gi|420820231|ref|ZP_15288157.1| hypothetical protein YPPY96_1053 [Yersinia pestis PY-96]
gi|421762385|ref|ZP_16199183.1| hypothetical protein INS_04831 [Yersinia pestis INS]
gi|108776946|gb|ABG19465.1| hypothetical protein YPN_3138 [Yersinia pestis Nepal516]
gi|108778234|gb|ABG12292.1| hypothetical protein YPA_0324 [Yersinia pestis Antiqua]
gi|115346724|emb|CAL19607.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209577|gb|ABP38984.1| hypothetical protein YPDSF_0574 [Yersinia pestis Pestoides F]
gi|149290664|gb|EDM40740.1| hypothetical protein YPE_2328 [Yersinia pestis CA88-4125]
gi|169749615|gb|ACA67133.1| alanine racemase domain protein [Yersinia pseudotuberculosis YPIII]
gi|229679531|gb|EEO75634.1| predicted enzyme [Yersinia pestis Nepal516]
gi|229690889|gb|EEO82943.1| predicted enzyme [Yersinia pestis biovar Orientalis str. India 195]
gi|229697226|gb|EEO87273.1| predicted enzyme [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229704322|gb|EEO91333.1| predicted enzyme [Yersinia pestis Pestoides A]
gi|320013977|gb|ADV97548.1| putative enzyme [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342852193|gb|AEL70746.1| hypothetical protein A1122_00300 [Yersinia pestis A1122]
gi|391495237|gb|EIR50356.1| hypothetical protein YPPY13_1142 [Yersinia pestis PY-13]
gi|391511062|gb|EIR64509.1| hypothetical protein YPPY16_1149 [Yersinia pestis PY-16]
gi|391559846|gb|EIS08546.1| hypothetical protein YPPY46_1098 [Yersinia pestis PY-46]
gi|391587380|gb|EIS32545.1| hypothetical protein YPPY55_1117 [Yersinia pestis PY-55]
gi|391660327|gb|EIS96501.1| hypothetical protein YPPY88_1085 [Yersinia pestis PY-88]
gi|391684997|gb|EIT18575.1| hypothetical protein YPPY93_1147 [Yersinia pestis PY-93]
gi|391699232|gb|EIT31444.1| hypothetical protein YPPY95_1158 [Yersinia pestis PY-95]
gi|391702880|gb|EIT34715.1| hypothetical protein YPPY96_1053 [Yersinia pestis PY-96]
gi|411177520|gb|EKS47534.1| hypothetical protein INS_04831 [Yersinia pestis INS]
Length = 232
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V R+ AA R P+ + ++AVSKTKPV+ I + AG FGENYVQE V+K
Sbjct: 8 LQDVRARIATAAHNCGRSPEEVTLLAVSKTKPVAAIEKAIAAGQYAFGENYVQEGVDKIH 67
Query: 100 QLPDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D+ LEWHFIG LQSNK + L+A N A +VD KIA RL+ L V
Sbjct: 68 SFVDNKTLEWHFIGPLQSNKSR-LVA--ENFAWCHTVDRLKIAQRLSAQ-RPAAMPALNV 123
Query: 158 LVQVNTSGEE 167
L+Q+N S E+
Sbjct: 124 LIQINISDEQ 133
>gi|392968027|ref|ZP_10333443.1| alanine racemase domain protein [Fibrisoma limi BUZ 3]
gi|387842389|emb|CCH55497.1| alanine racemase domain protein [Fibrisoma limi BUZ 3]
Length = 218
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 82/124 (66%), Gaps = 10/124 (8%)
Query: 44 IQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD 103
IQR+ ++ DR +++AV+KTKPV ++++ Y+AG R FGEN VQE+VEK LP
Sbjct: 6 IQRIE------TKINDRAKLIAVTKTKPVPLLQEAYDAGCRRFGENKVQEMVEKQPLLPA 59
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNT 163
D+EWH IG+LQ+NKVK + P +A+++SVD+ K+ +N+ R + L+Q++
Sbjct: 60 DVEWHLIGHLQTNKVKYI---APFVALIQSVDSLKLLQEINKQALKHER-VIDCLLQIHI 115
Query: 164 SGEE 167
+ EE
Sbjct: 116 AQEE 119
>gi|298386606|ref|ZP_06996162.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 1_1_14]
gi|383121298|ref|ZP_09942013.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_6]
gi|251837513|gb|EES65606.1| YggS family pyridoxal phosphate enzyme [Bacteroides sp. 1_1_6]
gi|298260983|gb|EFI03851.1| pyridoxal phosphate enzyme, YggS family [Bacteroides sp. 1_1_14]
Length = 222
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYETLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P +AM+ +D K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVAMIHGIDTYKLLTEVNKQAAKAGR-IVNCLLQIHVAQEE 120
>gi|421523523|ref|ZP_15970152.1| alanine racemase domain-containing protein [Pseudomonas putida
LS46]
gi|402752509|gb|EJX13014.1| alanine racemase domain-containing protein [Pseudomonas putida
LS46]
Length = 228
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNL 113
R P ++++AVSKTKP S IR+++ AG R FGENY+QE + K L D L WHFIG +
Sbjct: 23 GRDPASVQLLAVSKTKPASAIREIHAAGVRDFGENYLQEALTKQQALSDLPLIWHFIGPI 82
Query: 114 QSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
QSNK K + + V SVD KIA RL+ G PL + +QVN SGE+
Sbjct: 83 QSNKTKAI---AEHFDWVHSVDRLKIAQRLSEQ-RPAGLAPLNICLQVNVSGED 132
>gi|398991323|ref|ZP_10694468.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM24]
gi|399013690|ref|ZP_10715993.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM16]
gi|398112932|gb|EJM02784.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM16]
gi|398140798|gb|EJM29751.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM24]
Length = 228
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ A + + RP + ++++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VGSRIQTATQAAHRPENSVQLLAVSKTKPAEALREAYAAGLRDFGENYLQEALGKQLELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D L WHFIG +QSNK + A + V SVD KIA RL+ R E PL + +
Sbjct: 71 DLPLIWHFIGPIQSNKTR---AIAEHFDWVHSVDRLKIAQRLSEQRPAEL---PPLNICI 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|340521582|gb|EGR51816.1| predicted protein [Trichoderma reesei QM6a]
Length = 256
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 81/144 (56%), Gaps = 13/144 (9%)
Query: 33 DGVAATALRSVIQRVHQ--AAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGE 88
D A AL S + V Q AA RP +R+VAVSK KP + I ++ + H FGE
Sbjct: 4 DPTRAQALISQLNAVKQTIAAAAHGRP---VRLVAVSKLKPANDILALHNPPSSHTHFGE 60
Query: 89 NYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRMV 147
NY QE+ +KAA LP + WHFIG LQS K LA +PNL V SVD+ K A L N V
Sbjct: 61 NYAQELSQKAALLPSSINWHFIGGLQSTHCK-HLARIPNLFCVSSVDSSKKAHLLSNARV 119
Query: 148 ETMGRKP----LKVLVQVNTSGEE 167
+ P L V VQVNTSGEE
Sbjct: 120 AAIAANPEIAKLGVHVQVNTSGEE 143
>gi|418258195|ref|ZP_12881596.1| alanine racemase, N-terminal domain protein [Shigella flexneri
6603-63]
gi|420375163|ref|ZP_14875063.1| hypothetical protein SF123566_5095 [Shigella flexneri 1235-66]
gi|391313773|gb|EIQ71341.1| hypothetical protein SF123566_5095 [Shigella flexneri 1235-66]
gi|397895889|gb|EJL12314.1| alanine racemase, N-terminal domain protein [Shigella flexneri
6603-63]
Length = 234
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R+ E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNEQRLAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|355677871|ref|ZP_09060638.1| YggS family pyridoxal phosphate enzyme [Clostridium citroniae
WAL-17108]
gi|354812957|gb|EHE97571.1| YggS family pyridoxal phosphate enzyme [Clostridium citroniae
WAL-17108]
Length = 226
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 10/137 (7%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V + ++ A R+ R P+ + ++AVSKTKPV ++ + Y AG R FGEN VQEI+ K
Sbjct: 6 LDQVRETINAACIRAGRRPEEVTLIAVSKTKPVPMLEEAYAAGTRDFGENKVQEILAKKP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK---PLK 156
+LP D+ WH IG+LQ NKV ++ N M+ SVD+ RL R +E K +
Sbjct: 66 ELPQDIRWHMIGHLQRNKVSQVIG---NAVMIHSVDSL----RLARQIEAEAAKKEVDVD 118
Query: 157 VLVQVNTSGEEYGECFI 173
+L++VN + EE F+
Sbjct: 119 ILLEVNVAREESKYGFM 135
>gi|150006349|ref|YP_001301093.1| hypothetical protein BVU_3868 [Bacteroides vulgatus ATCC 8482]
gi|294776254|ref|ZP_06741739.1| pyridoxal phosphate enzyme, YggS family [Bacteroides vulgatus
PC510]
gi|149934773|gb|ABR41471.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|294449937|gb|EFG18452.1| pyridoxal phosphate enzyme, YggS family [Bacteroides vulgatus
PC510]
Length = 222
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 55 SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
S P +R+VAVSK P + + Y AG R FGE++VQE+ +K LP D+EWHFIG+LQ
Sbjct: 12 SELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQ 71
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECF 172
+NKVK + P +AM+ ++D+ K+ +N+ + R + L+Q++ + EE +G F
Sbjct: 72 TNKVKYM---APYVAMIHAIDSYKLLVEVNKQASKVHR-VIPCLLQIHIAQEETKFGFSF 127
Query: 173 IKC 175
+C
Sbjct: 128 DEC 130
>gi|153828401|ref|ZP_01981068.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148876110|gb|EDL74245.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 236
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
+ ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K
Sbjct: 11 ITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRDFGENYVQEGVDKIRYFA 70
Query: 103 DD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ LEWHFIG LQSNK + L+A + V ++D EKIA RL+ + PL+V
Sbjct: 71 EHHPQLALEWHFIGPLQSNKTR-LVA--EHFDWVHTIDREKIALRLSEQ-RPVNMPPLQV 126
Query: 158 LVQVNTSGE 166
L+QVNTSGE
Sbjct: 127 LIQVNTSGE 135
>gi|51246632|ref|YP_066516.1| hypothetical protein DP2780 [Desulfotalea psychrophila LSv54]
gi|50877669|emb|CAG37509.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 229
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V +R+ QAA+++ R P+ I++VAVSK P + Q G + FGENY+QE+ EK +
Sbjct: 9 VKERIAQAAKKAGRAPEDIQLVAVSKRLPAETVLQAIACGQQQFGENYIQEVQEKKELIG 68
Query: 103 DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
D +HFIGNLQSNK K +MVE+VD KIA LN+ + K L +LVQVN
Sbjct: 69 DKARFHFIGNLQSNKAK---MAATYCSMVETVDRLKIAKALNKHSLELD-KTLDILVQVN 124
Query: 163 TSGEE 167
++
Sbjct: 125 IGQDQ 129
>gi|387887906|ref|YP_006318204.1| hypothetical protein EBL_c05680 [Escherichia blattae DSM 4481]
gi|414594857|ref|ZP_11444490.1| hypothetical protein YggS [Escherichia blattae NBRC 105725]
gi|386922739|gb|AFJ45693.1| conserved enzyme with PLP-binding domain [Escherichia blattae DSM
4481]
gi|403194162|dbj|GAB82142.1| hypothetical protein YggS [Escherichia blattae NBRC 105725]
Length = 234
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V QR+ AA+R R P + ++AVSKTKP S I Q AG R FGENYVQE V+
Sbjct: 5 ADNLAQVHQRISAAAQRCGRDPKEVTLLAVSKTKPASDIEQAILAGQRAFGENYVQEGVD 64
Query: 97 KAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETM 150
K + DL WHFIG LQSNK + L+A + +VD KIA RL+ R E
Sbjct: 65 KIRYFQEASQRDLVWHFIGPLQSNKSR-LVA--EHFDWCHTVDRLKIATRLSEQRPAEM- 120
Query: 151 GRKPLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 121 --APLNVLIQINISDE 134
>gi|120553473|ref|YP_957824.1| alanine racemase domain-containing protein [Marinobacter aquaeolei
VT8]
gi|120323322|gb|ABM17637.1| alanine racemase domain protein [Marinobacter aquaeolei VT8]
Length = 237
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 82/134 (61%), Gaps = 8/134 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A + SV +R+ +A ++ R P +R++AVSKT+P ++ +EAG FGENY+QE ++
Sbjct: 5 ADNIGSVTRRIQKATLQAGREPGSVRLLAVSKTRPAEDLKAAFEAGQIAFGENYLQEALD 64
Query: 97 KAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRK 153
K L D +EWHFIG +QSNK + + A V SVD KIA RL+ + ET+
Sbjct: 65 KMQALSDIEGIEWHFIGPIQSNKTRQIAEA---FAWVHSVDRLKIARRLSEQRPETL--P 119
Query: 154 PLKVLVQVNTSGEE 167
PL + +QVN + E+
Sbjct: 120 PLNICLQVNINNED 133
>gi|393777751|ref|ZP_10366042.1| hypothetical protein MW7_2734 [Ralstonia sp. PBA]
gi|392715548|gb|EIZ03131.1| hypothetical protein MW7_2734 [Ralstonia sp. PBA]
Length = 232
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 77/130 (59%), Gaps = 8/130 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V QR+ A + SR D + ++AVSKT +R+ AG CFGENYVQE + K A
Sbjct: 8 LQAVRQRIATAQQACSRA-DPVTLMAVSKTFSAESVREAVAAGQSCFGENYVQEALGKMA 66
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D LEWHFIG LQSNK + + + V S+D K+A RL+ G +PL+
Sbjct: 67 ALADLRPQLEWHFIGPLQSNKTRQV---AEHFDWVHSIDRLKLAQRLSEQ-RPAGLQPLQ 122
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 123 VCIQVNISGE 132
>gi|255319900|ref|ZP_05361101.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens SK82]
gi|255303033|gb|EET82249.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter
radioresistens SK82]
Length = 231
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 6/127 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ +A+ ++ R + ++++AVSKT V+R++Y+AG R FGENY+QE +EK L
Sbjct: 11 VLAQIREASHKAGRADETVQLLAVSKTHSAGVLREMYQAGQRSFGENYLQEALEKIHSLQ 70
Query: 103 D--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
D D+EWHFIG++Q NK K L N V VD IA RL+ R L + +Q
Sbjct: 71 DLNDIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERLSAQRPEQ-RAALNICIQ 126
Query: 161 VNTSGEE 167
VN G+E
Sbjct: 127 VNIDGQE 133
>gi|414070251|ref|ZP_11406238.1| hypothetical protein D172_1470 [Pseudoalteromonas sp. Bsw20308]
gi|410807349|gb|EKS13328.1| hypothetical protein D172_1470 [Pseudoalteromonas sp. Bsw20308]
Length = 212
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEW 107
AA+ + R + I ++AVSKTKP I Y+ G R FGE+YVQE ++K AQL D+ W
Sbjct: 2 AAKNAQRNNNEITLLAVSKTKPSEDIIAAYKHGQREFGESYVQEAIDKIAQLQSYSDIIW 61
Query: 108 HFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
HFIG +QSNK + A N V+SVD KIA RLN + PL VL+QVN S EE
Sbjct: 62 HFIGPIQSNKSALVAA---NFDWVQSVDRMKIAKRLNSQ-RPGDKAPLNVLIQVNISNEE 117
>gi|393785000|ref|ZP_10373156.1| YggS family pyridoxal phosphate enzyme [Bacteroides salyersiae
CL02T12C01]
gi|392663805|gb|EIY57351.1| YggS family pyridoxal phosphate enzyme [Bacteroides salyersiae
CL02T12C01]
Length = 222
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PAGVRLVAVSKFHPNEAIEEAYSAGQRIFGESKVQEMTTKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + VP +AM+ +D+ K+ +N+ + R +K L+Q++ + EE
Sbjct: 75 IKYM---VPYVAMIHGIDSYKLLTEVNKQAAKVNR-VIKCLIQLHIAQEE 120
>gi|262379205|ref|ZP_06072361.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262298662|gb|EEY86575.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 236
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 6/127 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V+ ++ +A+ ++ R + ++++AVSKT V+R++Y+AG R FGENY+QE +EK L
Sbjct: 16 VLAQIREASHKAGRADETVQLLAVSKTHSAGVLREMYQAGQRSFGENYLQEALEKIHSLQ 75
Query: 103 D--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQ 160
D D+EWHFIG++Q NK K L N V VD IA RL+ R L + +Q
Sbjct: 76 DLNDIEWHFIGHVQRNKTKLL---AENFDWVHGVDRLIIAERLSAQRPEQ-RAALNICIQ 131
Query: 161 VNTSGEE 167
VN G+E
Sbjct: 132 VNIDGQE 138
>gi|322710536|gb|EFZ02110.1| alanine racemase family protein (ISS) [Metarhizium anisopliae ARSEF
23]
Length = 256
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 68/114 (59%), Gaps = 8/114 (7%)
Query: 61 IRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
+R+VAVSK KP + I +++A HR FGENY QE+ +KA LP ++WHFIG LQS
Sbjct: 31 VRLVAVSKLKPANDILALHQAPASHRHFGENYTQELTQKAQLLPKTIQWHFIGGLQSGHC 90
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNR-----MVETMGRKPLKVLVQVNTSGEE 167
K LA +PNL V SVD K A LN + L V VQVNTSGEE
Sbjct: 91 KT-LAKIPNLFCVSSVDTLKKAALLNTTRGALLASDPSLPKLSVHVQVNTSGEE 143
>gi|407692974|ref|YP_006817763.1| hypothetical protein ASU2_06930 [Actinobacillus suis H91-0380]
gi|407389031|gb|AFU19524.1| hypothetical protein ASU2_06930 [Actinobacillus suis H91-0380]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKV 118
+R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSNK
Sbjct: 26 VRLLAVSKTKPVEAIEEAITAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGPLQSNKT 85
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+ L+A N +++VD KIA RLN + PL VL+Q+N S E+
Sbjct: 86 R-LVA--ENFDWIQTVDRLKIAERLNAQ-RPANKAPLNVLIQINISDEQ 130
>gi|50304253|ref|XP_452076.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641208|emb|CAH02469.1| KLLA0B12265p [Kluyveromyces lactis]
Length = 258
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%), Gaps = 9/112 (8%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKP 120
+ ++AVSK KP + I+ +Y+ G R FGENYVQE++ K+ LP D++WHFIG LQSNK K
Sbjct: 49 VELLAVSKYKPAADIKILYDYGVRHFGENYVQEMITKSEILPQDIKWHFIGGLQSNKCKD 108
Query: 121 LLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KP----LKVLVQVNTSGEE 167
LA + NL VE+VD+ K A +L E G+ P + VQ+NTSGEE
Sbjct: 109 -LAKIANLYSVETVDSLKKAKKLE---EARGKWNPDAPVITCNVQINTSGEE 156
>gi|395796091|ref|ZP_10475390.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas sp.
Ag1]
gi|395339729|gb|EJF71571.1| pyridoxal phosphate enzyme, YggS family protein [Pseudomonas sp.
Ag1]
Length = 228
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVK 119
+ ++AVSKTKP +R+ Y AG R FGENY+QE + K A+L D L WHFIG +QSNK +
Sbjct: 29 VHLLAVSKTKPAQAVREAYAAGMRDFGENYLQEALGKQAELTDLPLSWHFIGPIQSNKTR 88
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ N A V SVD KIA RL+ PL + +QVN SGE
Sbjct: 89 AI---AENFAWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQVNVSGE 131
>gi|261868167|ref|YP_003256089.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415770811|ref|ZP_11485057.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416102708|ref|ZP_11588890.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345824|ref|ZP_21153828.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261413499|gb|ACX82870.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348008557|gb|EGY48823.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348656592|gb|EGY74202.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443542365|gb|ELT52702.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q + P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 8 LQLVQQKITQICQMVGSSPSAVTLLAVSKTKPVEDILTAYEAGQEAFGENYVQEGVEKIQ 67
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 68 FCQQHNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQ-RSPHKAPLN 123
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 124 VLIQVNISNE 133
>gi|282877895|ref|ZP_06286704.1| pyridoxal phosphate enzyme, YggS family [Prevotella buccalis ATCC
35310]
gi|281299896|gb|EFA92256.1| pyridoxal phosphate enzyme, YggS family [Prevotella buccalis ATCC
35310]
Length = 221
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 56 RPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQS 115
R PD + +VA+SK P +I Y AG R FGE+ QE+ EK LP+D+EWHFIG+LQ+
Sbjct: 14 RLPDDVCLVAISKYHPKEMIASAYAAGQRVFGESREQELAEKVEALPNDIEWHFIGHLQT 73
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE--EYGECFI 173
NKVK + P ++M+ESVD+ K+ +N+ R + VL++++ + E +YG
Sbjct: 74 NKVKYI---APYISMIESVDSPKLLREINKHAARSNR-VIDVLLELHIAEEATKYGFTLD 129
Query: 174 KC 175
KC
Sbjct: 130 KC 131
>gi|404491972|ref|YP_006716078.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Pelobacter
carbinolicus DSM 2380]
gi|77544101|gb|ABA87663.1| pyridoxal-5'-phosphate-dependent enzyme, class III [Pelobacter
carbinolicus DSM 2380]
Length = 228
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK 97
T L+++ +R++ A R +R P+ +++VAVSKTKP +I AG FGENYVQE + K
Sbjct: 5 TNLQTIRERMNAACRRVNRNPEDVQLVAVSKTKPADMIEAAAAAGQSLFGENYVQEFLTK 64
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+ + WHFIG+LQSNKVK L V AM+ SVD +A ++R G ++
Sbjct: 65 TEDVTVPVVWHFIGSLQSNKVKYLCGKV---AMIHSVDRLSLAKEIDRQWGKSGETA-QI 120
Query: 158 LVQVNTSGEE 167
L+QVN EE
Sbjct: 121 LIQVNLGQEE 130
>gi|33599228|ref|NP_886788.1| hypothetical protein BB0239 [Bordetella bronchiseptica RB50]
gi|410471034|ref|YP_006894315.1| hypothetical protein BN117_0234 [Bordetella parapertussis Bpp5]
gi|412340469|ref|YP_006969224.1| hypothetical protein BN112_3178 [Bordetella bronchiseptica 253]
gi|427812489|ref|ZP_18979553.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33575274|emb|CAE30737.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408441144|emb|CCJ47567.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408770303|emb|CCJ55095.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410563489|emb|CCN21023.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 250
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ R+ A ERS+RPP+ + ++ VSKT PV IR G R FGEN QEI KA
Sbjct: 24 LAAIQARIKAACERSARPPESVALLPVSKTFPVEAIRHAAALGLRRFGENKTQEIRHKAP 83
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D DL+W IG+LQ+NK K + ++A V+S+D ++A L R +E R L VL
Sbjct: 84 ELADLDLQWVMIGHLQTNKAKDV---ARDVAEVQSLDRLELADALQRRLEMEARS-LDVL 139
Query: 159 VQVNTSGE--EYG 169
VQV TS E +YG
Sbjct: 140 VQVKTSPEPSKYG 152
>gi|416068026|ref|ZP_11582614.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348001502|gb|EGY42244.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 248
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q + P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 25 LQLVQQKITQICQMVGSSPSAVTLLAVSKTKPVEDILTAYEAGQEAFGENYVQEGVEKIQ 84
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 85 FCQQHNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQ-RSPHKAPLN 140
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 141 VLIQVNISNE 150
>gi|288933579|ref|YP_003437638.1| alanine racemase [Klebsiella variicola At-22]
gi|290511354|ref|ZP_06550723.1| YggS family pyridoxal phosphate enzyme [Klebsiella sp. 1_1_55]
gi|288888308|gb|ADC56626.1| alanine racemase domain protein [Klebsiella variicola At-22]
gi|289776347|gb|EFD84346.1| YggS family pyridoxal phosphate enzyme [Klebsiella sp. 1_1_55]
Length = 233
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 75/132 (56%), Gaps = 8/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ + ++AVSKTKP S I + AG R FGENYVQE VEK
Sbjct: 8 LAQVRDKISGAAARCGRAPEEVTLLAVSKTKPASAIEEAIVAGQRAFGENYVQEGVEKIN 67
Query: 100 QLP----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
L+WHFIG LQSNK + L+A + +VD KIA RLN PL
Sbjct: 68 HFQQAGISGLQWHFIGPLQSNKSR-LVA--EHFDWCHTVDRLKIATRLNEQ-RPAHLPPL 123
Query: 156 KVLVQVNTSGEE 167
KVL+Q+N S E+
Sbjct: 124 KVLIQINISDEQ 135
>gi|421140954|ref|ZP_15600948.1| dihydroorotase [Pseudomonas fluorescens BBc6R8]
gi|404507725|gb|EKA21701.1| dihydroorotase [Pseudomonas fluorescens BBc6R8]
Length = 228
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVK 119
+ ++AVSKTKP +R+ Y AG R FGENY+QE + K A+L D L WHFIG +QSNK +
Sbjct: 29 VHLLAVSKTKPAQAVREAYAAGMRDFGENYLQEALGKQAELTDLPLSWHFIGPIQSNKTR 88
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ N A V SVD KIA RL+ + PL + +QVN SGE
Sbjct: 89 AI---AENFAWVHSVDRLKIAQRLSEQRPS-DLPPLNICIQVNVSGE 131
>gi|335044591|ref|ZP_08537616.1| putative enzyme with a TIM-barrel domain containing protein
[Methylophaga aminisulfidivorans MP]
gi|333787837|gb|EGL53721.1| putative enzyme with a TIM-barrel domain containing protein
[Methylophaga aminisulfidivorans MP]
Length = 229
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 78/135 (57%), Gaps = 9/135 (6%)
Query: 38 TALRSVIQRVHQAAERS----SRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
T ++ Q++H S R P ++++AVSKT P +R+V G R FGENY+QE
Sbjct: 2 TDVKKRFQQIHHEISTSVSAAKRDPQSVQLLAVSKTWPADALREVAALGQRQFGENYLQE 61
Query: 94 IVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR 152
++K L D DLEWHFIG +QSNK + +AG + V+SVD EKIA RLN
Sbjct: 62 ALDKIDALADLDLEWHFIGPIQSNKTRD-IAG--HFDWVQSVDREKIARRLNEH-RPDSL 117
Query: 153 KPLKVLVQVNTSGEE 167
PL V +Q+N EE
Sbjct: 118 APLNVCIQINIDEEE 132
>gi|33594951|ref|NP_882594.1| hypothetical protein BPP0235 [Bordetella parapertussis 12822]
gi|33565027|emb|CAE39976.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 256
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ R+ A ERS+RPP+ + ++ VSKT PV IR G R FGEN QEI KA
Sbjct: 30 LAAIQARIKAACERSARPPESVALLPVSKTFPVEAIRHAAALGLRRFGENKTQEIRHKAP 89
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D DL+W IG+LQ+NK K + ++A V+S+D ++A L R +E R L VL
Sbjct: 90 ELADLDLQWVMIGHLQTNKAKDV---ARDVAEVQSLDRLELADALQRRLEMEARS-LDVL 145
Query: 159 VQVNTSGE--EYG 169
VQV TS E +YG
Sbjct: 146 VQVKTSPELSKYG 158
>gi|326203530|ref|ZP_08193394.1| alanine racemase domain protein [Clostridium papyrosolvens DSM
2782]
gi|325986350|gb|EGD47182.1| alanine racemase domain protein [Clostridium papyrosolvens DSM
2782]
Length = 235
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L + R+ AAE+S R + I+++AV+KT V IR V E G FGEN VQE++EK
Sbjct: 10 LDDIYTRIKAAAEKSGRKAEDIKLIAVTKTVEVDRIRNVSEYGVPDFGENRVQELLEKYD 69
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
+ + +WH IG+LQ+NKVK ++ V M+ SVD+ ++A ++ G+K + +L+
Sbjct: 70 KFDEATKWHLIGHLQTNKVKYIIDKV---HMIHSVDSFELAKEIDNRAGKTGKK-MNILL 125
Query: 160 QVNTSGEE 167
QVN SGEE
Sbjct: 126 QVNVSGEE 133
>gi|257465703|ref|ZP_05630074.1| hypothetical protein AM202_04262 [Actinobacillus minor 202]
gi|257451363|gb|EEV25406.1| hypothetical protein AM202_04262 [Actinobacillus minor 202]
Length = 228
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 6/108 (5%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD--LEWHFIGNLQSNKV 118
IR++AVSKTKPV I + +AG + FGENYVQE VEK ++ +EWHFIG LQSNK
Sbjct: 26 IRLLAVSKTKPVQAIEEAIQAGQKAFGENYVQEGVEKINYFKENEEIEWHFIGPLQSNKS 85
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ L+A + +++VD KIA RLN +G+ PL VL+Q+N S E
Sbjct: 86 R-LVA--EHFDWIQTVDRLKIAERLNEQ-RPVGKAPLNVLIQINISDE 129
>gi|165975509|ref|YP_001651102.1| hypothetical protein APJL_0052 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|307249250|ref|ZP_07531247.1| hypothetical protein appser4_670 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|165875610|gb|ABY68658.1| hypothetical protein APJL_0052 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|306858774|gb|EFM90833.1| hypothetical protein appser4_670 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Query: 59 DRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSN 116
D +R++AVSKTKPV I + AG FGENYVQE +EK A +LEWHFIG LQSN
Sbjct: 24 DNVRLLAVSKTKPVEAIEEAIVAGQTAFGENYVQEGIEKIAYFAQQPNLEWHFIGPLQSN 83
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
K + L+A N +++VD KIA RLN + PL VL+Q+N S E
Sbjct: 84 KTR-LVA--ENFDWIQTVDRLKIAERLNAQ-RPKNKAPLNVLIQINISDE 129
>gi|422021982|ref|ZP_16368491.1| PLP-binding domain-containing protein [Providencia sneebia DSM
19967]
gi|414097732|gb|EKT59385.1| PLP-binding domain-containing protein [Providencia sneebia DSM
19967]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ +V R+ QAA++ R P I ++AVSKTKP I + AG R FGENYVQE VEK
Sbjct: 7 ISNVKTRIEQAAKQCQRSPQDITLLAVSKTKPCEAILEAIAAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLPDD--LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D L WHFIG LQSNK + L+A + ++D KIA RLN + PL V
Sbjct: 67 YFADKYPLTWHFIGPLQSNKSR-LVA--EHFDWFHTLDRVKIAQRLNDQ-RPNDKAPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|431797589|ref|YP_007224493.1| pyridoxal phosphate protein [Echinicola vietnamensis DSM 17526]
gi|430788354|gb|AGA78483.1| pyridoxal phosphate enzyme, YggS family [Echinicola vietnamensis
DSM 17526]
Length = 224
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Query: 63 IVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLL 122
++AVSKTKPVS I++ Y+AG R FGEN VQE+ EK QLPDD+ WH IG+LQ NKVK +
Sbjct: 21 LIAVSKTKPVSDIQEAYDAGIRHFGENKVQELTEKQPQLPDDIRWHMIGHLQRNKVKYI- 79
Query: 123 AGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
P + ++ VD+ K+ +N+ + R + L+QV+ + EE
Sbjct: 80 --APFIHLIHGVDSFKLLKEINKQAQKADR-VIACLLQVHIAKEE 121
>gi|418464145|ref|ZP_13035086.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359757325|gb|EHK91480.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q + P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 8 LQLVQQKITQICQMIGSPSSAVTLLAVSKTKPVEDILTAYEAGQAAFGENYVQEGVEKIQ 67
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 68 FCQQQNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQ-RSPHKAPLN 123
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 124 VLIQVNISNE 133
>gi|415754523|ref|ZP_11480682.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348656203|gb|EGY71602.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 248
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q + P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 25 LQLVQQKITQICQMVGSSPSAVTLLAVSKTKPVEDILTAYEAGQEAFGENYVQEGVEKIQ 84
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 85 FCQQHNINLEWHFIGPLQSNKTR-LVAEY--FDWMQALDRAKIADRLNEQ-RSPHKAPLN 140
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 141 VLIQVNISNE 150
>gi|416051150|ref|ZP_11577268.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347993345|gb|EGY34713.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q + P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 8 LQLVQQKITQICQMIGSSPSAVTLLAVSKTKPVEDILTAYEAGQAAFGENYVQEGVEKIQ 67
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 68 FCQQQNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQ-RSPHKAPLN 123
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 124 VLIQVNISNE 133
>gi|260773602|ref|ZP_05882518.1| hypothetical protein VIB_002076 [Vibrio metschnikovii CIP 69.14]
gi|260612741|gb|EEX37944.1| hypothetical protein VIB_002076 [Vibrio metschnikovii CIP 69.14]
Length = 238
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ + ++ A ++ R P ++++AVSKTKPV I + AG FGENYVQE V K
Sbjct: 8 IEQITSQMKSAQQKCGRSPSSVQLLAVSKTKPVEAILEAALAGQLAFGENYVQEGVNKIR 67
Query: 100 QLPD-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
+ DLEWHFIG LQSNK + L+A + + ++D KIA RL+ + P
Sbjct: 68 YFAEHHPQLDLEWHFIGPLQSNKTR-LIA--EHFDWMHTLDRAKIAQRLSEQ-RPAHKAP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|398853098|ref|ZP_10609728.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM80]
gi|398241823|gb|EJN27460.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM80]
Length = 228
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ A + + RP + ++++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VGSRIQTATQAAHRPVNSVQLLAVSKTKPAETLREAYAAGLRDFGENYLQEALGKQLELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D L WHFIG +QSNK + A + V SVD KIA RL+ R E PL + +
Sbjct: 71 DLPLIWHFIGPIQSNKTR---AIAEHFDWVHSVDRLKIAQRLSEQRPAEL---PPLNICI 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|374339925|ref|YP_005096661.1| pyridoxal phosphate protein [Marinitoga piezophila KA3]
gi|372101459|gb|AEX85363.1| pyridoxal phosphate enzyme, YggS family [Marinitoga piezophila KA3]
Length = 232
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +++ ++AERS+R D IR+VAVSKT PV I+ YE G + FGEN QE+ K
Sbjct: 8 LDFVNEKIKESAERSNRQFDEIRLVAVSKTFPVDYIKAAYEYGIKNFGENKAQELRAKHQ 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D+ WHFIG +Q+NKVK + VP + SV EK ++++ + K K+L
Sbjct: 68 ELEGYDITWHFIGRIQTNKVKYI---VPIAEYIHSVYREKELKEIDKIAKKHN-KIQKIL 123
Query: 159 VQVNTSGEE 167
++VN SGEE
Sbjct: 124 IEVNVSGEE 132
>gi|193076643|gb|ABO11330.2| hypothetical protein A1S_0898 [Acinetobacter baumannii ATCC 17978]
Length = 230
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQCGD-DQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|429734784|ref|ZP_19268784.1| pyridoxal phosphate enzyme, YggS family [Aggregatibacter
actinomycetemcomitans Y4]
gi|429151054|gb|EKX93938.1| pyridoxal phosphate enzyme, YggS family [Aggregatibacter
actinomycetemcomitans Y4]
Length = 231
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q + P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 8 LQLVQQKITQICQMVGSSPSAVTLLAVSKTKPVEDILTAYEAGQEAFGENYVQEGVEKIQ 67
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 68 FCQQHNINLEWHFIGPLQSNKTR-LVAEY--FDWMQALDRAKIADRLNEQ-RSPHKAPLN 123
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 124 VLIQVNISNE 133
>gi|359454403|ref|ZP_09243687.1| UPF0001 protein PM0112 [Pseudoalteromonas sp. BSi20495]
gi|358048574|dbj|GAA79936.1| UPF0001 protein PM0112 [Pseudoalteromonas sp. BSi20495]
Length = 212
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEW 107
AA+ + R + I ++AVSKTKP I Y+ G R FGE+YVQE ++K AQL D+ W
Sbjct: 2 AAKNAQRNNNEITLLAVSKTKPSEDIIAAYKHGQREFGESYVQEAIDKIAQLQSYSDIIW 61
Query: 108 HFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
HFIG +QSNK L+A N V+SVD KIA RLN + PL VL+QVN S EE
Sbjct: 62 HFIGPIQSNK-SALVA--TNFDWVQSVDRMKIAKRLNSQ-RPGDKAPLNVLIQVNISNEE 117
>gi|307728514|ref|YP_003905738.1| alanine racemase domain-containing protein [Burkholderia sp.
CCGE1003]
gi|307583049|gb|ADN56447.1| alanine racemase domain protein [Burkholderia sp. CCGE1003]
Length = 232
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R I ++AVSKT P +R + AG R FGENYVQE + K
Sbjct: 8 LEAVQQRIATAAHVAGRDARSIALLAVSKTFPAEDVRAAHAAGQRAFGENYVQEALTKIE 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D LEWHFIG LQSNK +P+ + V SVD KIA RL+ PL
Sbjct: 68 ALGDLRTSLEWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQ-RPEHLPPLN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|407794017|ref|ZP_11141047.1| alanine racemase domain-containing protein [Idiomarina xiamenensis
10-D-4]
gi|407213870|gb|EKE83723.1| alanine racemase domain-containing protein [Idiomarina xiamenensis
10-D-4]
Length = 226
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 67/109 (61%), Gaps = 7/109 (6%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP---DDLEWHFIGNLQSNK 117
I +VAVSKTKP I Q Y AG R FGENYVQE V K QL D+ WHFIG +QSNK
Sbjct: 30 INLVAVSKTKPADAIEQAYAAGQRAFGENYVQEGVAKVQQLQTVCSDIVWHFIGPIQSNK 89
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ + + V+S+D +KIA RLN+ + PL+VL+QVN E
Sbjct: 90 SRDV---AEHFDWVQSIDRDKIAKRLNQQRPSH-LPPLQVLIQVNIDDE 134
>gi|261879479|ref|ZP_06005906.1| K+ uptake protein [Prevotella bergensis DSM 17361]
gi|270333904|gb|EFA44690.1| K+ uptake protein [Prevotella bergensis DSM 17361]
Length = 224
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ +++VA+SK P I Y AG R FGE+ QE+ KA QLP D++WHFIG+LQ NK
Sbjct: 17 PEGVQLVAISKFHPNEYIEAAYAAGQRIFGESREQELRLKAEQLPKDIQWHFIGHLQGNK 76
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + P ++M+ESVD K+ +N+ E R + +L++++ + EE +G F C
Sbjct: 77 VKSI---APYISMIESVDTFKLMKEINKQAEKNNR-VIDILLELHVADEETKFGFSFEAC 132
>gi|374622147|ref|ZP_09694674.1| alanine racemase domain-containing protein [Ectothiorhodospira sp.
PHS-1]
gi|373941275|gb|EHQ51820.1| alanine racemase domain-containing protein [Ectothiorhodospira sp.
PHS-1]
Length = 228
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 7/123 (5%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ AAER R P+ IR++AVSKT+P + G + FGENYV E+ +KA L D
Sbjct: 14 RIQTAAERFGRRPEDIRLLAVSKTQPAEAVAAALACGQQAFGENYVSELTDKARALADRG 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLKVLVQVNT 163
+ WHFIG +Q NK + + V SVD E+IA RLN + E++ PL+V +QVN
Sbjct: 74 VTWHFIGPIQGNKTRAI---AETAQWVHSVDRERIARRLNDQRPESL--PPLQVCIQVNI 128
Query: 164 SGE 166
SGE
Sbjct: 129 SGE 131
>gi|317049428|ref|YP_004117076.1| alanine racemase domain-containing protein [Pantoea sp. At-9b]
gi|316951045|gb|ADU70520.1| alanine racemase domain protein [Pantoea sp. At-9b]
Length = 235
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 69/111 (62%), Gaps = 6/111 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEWHFIGNLQS 115
P+ I ++AVSKTKPVS + + AG R FGENYVQE VEK L DL+WHFIG LQS
Sbjct: 26 PEEITLLAVSKTKPVSAVEEAIAAGQRAFGENYVQEGVEKVTTLAAHPDLQWHFIGPLQS 85
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
NK + L+A + +VD ++IA RLN PL VL+QVN S E
Sbjct: 86 NKSR-LVA--EHFGWCHTVDRQRIAQRLNDQ-RPAHLPPLNVLIQVNISDE 132
>gi|50122548|ref|YP_051715.1| alanine racemase [Pectobacterium atrosepticum SCRI1043]
gi|49613074|emb|CAG76525.1| putative alanine racemase [Pectobacterium atrosepticum SCRI1043]
Length = 237
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 50 AAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD----- 104
AA +R P+ I ++AVSKTKPVS I + AG R FGENYVQE VEK ++
Sbjct: 18 AATHCARAPEEITLLAVSKTKPVSAIEEAIAAGQRAFGENYVQEGVEKIHYFQENQPNTP 77
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
LEWHFIG LQSNK + L+A N +VD +IA RL+ T PL VL+Q+N S
Sbjct: 78 LEWHFIGPLQSNKSR-LVAE--NFDWFHTVDRLRIAQRLSEQRPTT-LPPLNVLLQINIS 133
Query: 165 GE 166
E
Sbjct: 134 NE 135
>gi|372272871|ref|ZP_09508919.1| alanine racemase domain-containing protein [Marinobacterium
stanieri S30]
Length = 235
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 42 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL 101
SV +++ A + R D ++++AVSKT+ +RQ+++ G FGENY+QE ++K L
Sbjct: 8 SVCKQIRNACNTAGRDADEVQLLAVSKTRAADEVRQLHDCGQTAFGENYLQEALDKIEAL 67
Query: 102 PD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKPLKVLV 159
D LEWHFIG +QSNK +P+ + V SVD KIA RL+ + + +G PL + +
Sbjct: 68 QDLPLEWHFIGPIQSNKTRPI---AESFNWVHSVDRLKIARRLSEQRPDALG--PLNICL 122
Query: 160 QVNTSGEE 167
Q+N SGE+
Sbjct: 123 QINISGED 130
>gi|425777816|gb|EKV15972.1| Alanine racemase family protein, putative [Penicillium digitatum
PHI26]
gi|425782584|gb|EKV20483.1| Alanine racemase family protein, putative [Penicillium digitatum
Pd1]
Length = 268
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 80/140 (57%), Gaps = 12/140 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA--GHRCFGENYVQEIVEK 97
L +V RV+ A +S P IR+VAVSK KP S +++A FGENY+QE++EK
Sbjct: 16 LTAVRARVNTAVLQSPIPSKPIRLVAVSKLKPASDALALHQAPGAQLHFGENYLQELLEK 75
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK---- 153
+ LP ++WHFIG LQSNK L V L VESVD+EK A L++ G
Sbjct: 76 SRLLPATIKWHFIGGLQSNKCVTLARDVRGLWAVESVDSEKKAKLLDKGWSERGSAMAAT 135
Query: 154 ------PLKVLVQVNTSGEE 167
L++ +Q+NTSGEE
Sbjct: 136 NHEEDGKLRIYIQINTSGEE 155
>gi|400406155|ref|YP_006588903.1| pyridoxal phosphate enzyme, YggS family [secondary endosymbiont of
Heteropsylla cubana]
gi|400364408|gb|AFP85475.1| pyridoxal phosphate enzyme, YggS family [secondary endosymbiont of
Heteropsylla cubana]
Length = 230
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 13/131 (9%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V ++++ A +R P +I +VAVSKTKPV+ I + GHR FGE+Y QE ++K L
Sbjct: 11 VYKKIYTIAHNFNRDPSKITLVAVSKTKPVTTILEAINTGHRSFGESYAQEAIKKIVWLR 70
Query: 103 D-----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPL 155
D DL WHFIG++Q NK + L+A N +VD +KI LN R+ + PL
Sbjct: 71 DKRKIKDLIWHFIGHVQINKSR-LIA--ENFDWCHTVDRKKIVENLNEKRLKNLI---PL 124
Query: 156 KVLVQVNTSGE 166
VL+Q+N SGE
Sbjct: 125 NVLIQINISGE 135
>gi|300900232|ref|ZP_07118416.1| pyridoxal phosphate enzyme, YggS family [Escherichia coli MS 198-1]
gi|300356248|gb|EFJ72118.1| pyridoxal phosphate enzyme, YggS family [Escherichia coli MS 198-1]
Length = 234
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I Q +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAQAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|417609574|ref|ZP_12260074.1| hypothetical protein ECSTECDG1313_3992 [Escherichia coli
STEC_DG131-3]
gi|345356785|gb|EGW88986.1| hypothetical protein ECSTECDG1313_3992 [Escherichia coli
STEC_DG131-3]
Length = 234
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R SR P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCSRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|432373518|ref|ZP_19616553.1| hypothetical protein WCO_02564 [Escherichia coli KTE11]
gi|430894559|gb|ELC16847.1| hypothetical protein WCO_02564 [Escherichia coli KTE11]
Length = 234
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISTAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E +
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAELL--- 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|392981807|ref|YP_006480394.1| PLP dependent enzyme [Pseudomonas aeruginosa DK2]
gi|419755877|ref|ZP_14282229.1| putative PLP dependent enzyme [Pseudomonas aeruginosa PADK2_CF510]
gi|384397539|gb|EIE43950.1| putative PLP dependent enzyme [Pseudomonas aeruginosa PADK2_CF510]
gi|392317312|gb|AFM62692.1| putative PLP dependent enzyme [Pseudomonas aeruginosa DK2]
Length = 230
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A L
Sbjct: 11 VAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAGLA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QV
Sbjct: 71 DLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|402311957|ref|ZP_10830887.1| pyridoxal phosphate enzyme, YggS family [Lachnospiraceae bacterium
ICM7]
gi|400370618|gb|EJP23600.1| pyridoxal phosphate enzyme, YggS family [Lachnospiraceae bacterium
ICM7]
Length = 226
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 12/135 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++VI + A E+S R + + ++AVSKTKP +I + YE+G R FGEN VQE++ K
Sbjct: 6 LQNVIDDMKIACEKSGRNINDVTLIAVSKTKPNELIMEAYESGVRDFGENKVQELLRKKE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP---LK 156
+LP D+ WH IG+LQ+NKV+ LL N ++ S+D + RL ++T RK +
Sbjct: 66 ELPKDIRWHMIGHLQTNKVRQLLG---NTVLIHSID----SIRLADTIDTEARKKGIHVD 118
Query: 157 VLVQVNTSGE--EYG 169
L+++N + E +YG
Sbjct: 119 GLLEINIAKEASKYG 133
>gi|393788384|ref|ZP_10376514.1| YggS family pyridoxal phosphate enzyme [Bacteroides nordii
CL02T12C05]
gi|392656057|gb|EIY49698.1| YggS family pyridoxal phosphate enzyme [Bacteroides nordii
CL02T12C05]
Length = 224
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P R+R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PPRVRLVAVSKFHPNEAIEEAYNAGQRIFGESKVQEMTAKHESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + P +AM+ +D+ K+ +N+ + R +K L+Q++ + EE
Sbjct: 75 IKYM---APYVAMIHGIDSYKLLVEVNKQAAKVER-TIKCLLQLHIAQEE 120
>gi|240948416|ref|ZP_04752794.1| hypothetical protein AM305_01454 [Actinobacillus minor NM305]
gi|240297242|gb|EER47800.1| hypothetical protein AM305_01454 [Actinobacillus minor NM305]
Length = 230
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD--LEWHFIGNLQSNKV 118
IR++AVSKTKPV I + +AG + FGENYVQE VEK ++ +EWHFIG LQSNK
Sbjct: 26 IRLLAVSKTKPVQAIEEAIQAGQKAFGENYVQEGVEKINYFKENKEIEWHFIGPLQSNKT 85
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ L+A + +++VD KIA RLN G+ PL VL+Q+N S E
Sbjct: 86 R-LVA--EHFDWIQTVDRLKIAERLNEQ-RPEGKAPLNVLIQINISDE 129
>gi|451948174|ref|YP_007468769.1| pyridoxal phosphate enzyme, YggS family [Desulfocapsa sulfexigens
DSM 10523]
gi|451907522|gb|AGF79116.1| pyridoxal phosphate enzyme, YggS family [Desulfocapsa sulfexigens
DSM 10523]
Length = 232
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L ++ Q ++Q A R P I+++AVSK ++ I++ AG FGENY+QE E
Sbjct: 4 ANNLNTIHQSINQTALACDRAPSSIKLIAVSKRHSIASIKEAMAAGQYYFGENYIQEAAE 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
K + D ++HFIG++QSNK K L A + +MVE+VD K+A LN+ + T+ RK L
Sbjct: 64 KRHSIDDAAKFHFIGHVQSNKAK-LAAEL--FSMVETVDRLKLAKALNKHLLTLDRK-LD 119
Query: 157 VLVQVNTSGEE 167
+L+QVN GE+
Sbjct: 120 ILIQVNI-GED 129
>gi|442320017|ref|YP_007360038.1| hypothetical protein MYSTI_03038 [Myxococcus stipitatus DSM 14675]
gi|441487659|gb|AGC44354.1| hypothetical protein MYSTI_03038 [Myxococcus stipitatus DSM 14675]
Length = 223
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 7/129 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L SV RV +A R+ RP + + +VAVSK KP ++IR+ Y AG R FGENY QE+ +KAA
Sbjct: 9 LASVRARVAEACVRAGRPVESVTLVAVSKLKPAALIREAYAAGQRDFGENYAQELRDKAA 68
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
+L D L WH IG LQ+NKVK +A V + +++ ++A L++ E G PL
Sbjct: 69 ELADLEGLRWHAIGPLQTNKVK-YVAKVAH--AFHALERLEVARELSKRRE--GTTPLPC 123
Query: 158 LVQVNTSGE 166
V+VN GE
Sbjct: 124 YVEVNVGGE 132
>gi|114332299|ref|YP_748521.1| hypothetical protein Neut_2339 [Nitrosomonas eutropha C91]
gi|114309313|gb|ABI60556.1| Protein of unknown function UPF0001 [Nitrosomonas eutropha C91]
Length = 238
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A+ L++V R+ AA+ R P I+++A SKT +R+ +EAG FGENY+QE +
Sbjct: 5 ASRLQNVKNRIIDAAKNVGRDPATIQLLAASKTNTPDKLREAWEAGQTVFGENYLQEGLV 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K L D +EWHFIG +QSNK K L+A N + V +D EKIA RL+ PL
Sbjct: 65 KIRALADLPIEWHFIGPIQSNKTK-LIA--ENFSWVHGIDREKIATRLS-AARPESLPPL 120
Query: 156 KVLVQVNTSGE 166
+V VQVN SGE
Sbjct: 121 QVCVQVNVSGE 131
>gi|302667847|ref|XP_003025502.1| hypothetical protein TRV_00264 [Trichophyton verrucosum HKI 0517]
gi|291189616|gb|EFE44891.1| hypothetical protein TRV_00264 [Trichophyton verrucosum HKI 0517]
Length = 303
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 74/126 (58%), Gaps = 17/126 (13%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
PP +R+VAVSK KPVS I ++ H FGENY+QE++EK+ LP ++ WHFIG LQ
Sbjct: 68 PP--VRLVAVSKLKPVSDILALHSPPTSHLHFGENYMQELLEKSKALPPEIRWHFIGGLQ 125
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLN---------RMVETMGRKP----LKVLVQV 161
SNK L V L VESVD EK A L+ + E +P L+V VQV
Sbjct: 126 SNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKENDANQPLDRRLRVFVQV 185
Query: 162 NTSGEE 167
NTSGEE
Sbjct: 186 NTSGEE 191
>gi|303321047|ref|XP_003070518.1| hypothetical protein CPC735_062460 [Coccidioides posadasii C735
delta SOWgp]
gi|240110214|gb|EER28373.1| hypothetical protein CPC735_062460 [Coccidioides posadasii C735
delta SOWgp]
gi|320036044|gb|EFW17984.1| alanine racemase [Coccidioides posadasii str. Silveira]
Length = 280
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 89/167 (53%), Gaps = 25/167 (14%)
Query: 26 MAASAATDGVA-------ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQV 78
M+AS+A + A A+AL + + V +S P +R+VAVSK KP S I +
Sbjct: 1 MSASSAPEPSADMPSPSRASALLANLSSVTSRISAASVPGSSVRLVAVSKLKPASDILAL 60
Query: 79 YE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDN 136
Y H FGENY+QE++EK+ LP ++ WHFIG LQSNK L V L VESVD
Sbjct: 61 YNPPTSHLHFGENYLQELLEKSKILPPEIRWHFIGGLQSNKCVTLARDVRGLWAVESVDT 120
Query: 137 EKIAGRLNR--------------MVETMGRKP--LKVLVQVNTSGEE 167
+K A L++ E +P L+V VQVNTSGEE
Sbjct: 121 QKKATLLDKGWGERLKNHSAQQQQQEQSRAEPERLRVFVQVNTSGEE 167
>gi|404403967|ref|ZP_10995551.1| putative enzyme with a TIM-barrel fold protein [Alistipes sp.
JC136]
Length = 225
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 74/110 (67%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P + +VAVSKT P +IR+ Y+AGHR FGE+ QE+ EK LP D+EWH IG+LQ+NK
Sbjct: 16 PAEVTLVAVSKTHPAEMIREAYDAGHRIFGESRPQELREKYEALPKDIEWHMIGHLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + P +A++ SVD+ ++A + R GR +++L++++ + E+
Sbjct: 76 IKYI---APFVALIHSVDSARLAEAIQREAAKCGRT-IEILLEIHVAEED 121
>gi|403222166|dbj|BAM40298.1| proline synthetase associated protein [Theileria orientalis strain
Shintoku]
Length = 223
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 56 RPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQS 115
RP + ++ VSK PV I ++ G FGEN VQ++ EKA+ L D++WHFIG+LQ+
Sbjct: 16 RPFSGVSLLVVSKNAPVESIALLHSNGQVHFGENRVQDLFEKASSLSSDIKWHFIGHLQT 75
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTS 164
NK LL VPNL M+ES+D+ +A +L+ ++ + L VLVQVNTS
Sbjct: 76 NKCS-LLLRVPNLHMLESLDSIDLALKLSDLMSREPSRTLFVLVQVNTS 123
>gi|336434969|ref|ZP_08614687.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001862|gb|EGN31989.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
1_4_56FAA]
Length = 240
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 16/134 (11%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V QR+ A R+ R + + ++AVSKTKPV +++ Y+ G R FGEN VQE+ EK
Sbjct: 16 LEEVEQRIQAACRRAGRKREEVTLIAVSKTKPVEDLKEAYQLGIRTFGENKVQELTEKYE 75
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK--- 156
LP D+ WH IG+LQ+NKVK + V ++ SVD+ K+A ET+ ++ K
Sbjct: 76 VLPKDIHWHMIGHLQTNKVKYI---VDKAELIHSVDSLKLA-------ETIEKEAAKKNC 125
Query: 157 ---VLVQVNTSGEE 167
+L++VN + EE
Sbjct: 126 IVSILIEVNVAQEE 139
>gi|218706466|ref|YP_002413985.1| hypothetical protein ECUMN_3303 [Escherichia coli UMN026]
gi|293406458|ref|ZP_06650384.1| UPF0001 protein yggS [Escherichia coli FVEC1412]
gi|298382195|ref|ZP_06991792.1| yggS protein [Escherichia coli FVEC1302]
gi|331664534|ref|ZP_08365440.1| pyridoxal phosphate enzyme, YggS family [Escherichia coli TA143]
gi|419934760|ref|ZP_14451862.1| putative enzyme [Escherichia coli 576-1]
gi|432354878|ref|ZP_19598147.1| hypothetical protein WCA_03870 [Escherichia coli KTE2]
gi|432403230|ref|ZP_19645978.1| hypothetical protein WEK_03435 [Escherichia coli KTE26]
gi|432427506|ref|ZP_19669995.1| hypothetical protein A139_02905 [Escherichia coli KTE181]
gi|432461963|ref|ZP_19704104.1| hypothetical protein A15I_02837 [Escherichia coli KTE204]
gi|432539229|ref|ZP_19776125.1| hypothetical protein A195_02859 [Escherichia coli KTE235]
gi|432642441|ref|ZP_19878269.1| hypothetical protein A1W1_03318 [Escherichia coli KTE83]
gi|432667431|ref|ZP_19903007.1| hypothetical protein A1Y3_04047 [Escherichia coli KTE116]
gi|432771885|ref|ZP_20006204.1| hypothetical protein A1S9_04682 [Escherichia coli KTE50]
gi|432963305|ref|ZP_20152724.1| hypothetical protein A15E_03662 [Escherichia coli KTE202]
gi|433054609|ref|ZP_20241777.1| hypothetical protein WIK_03415 [Escherichia coli KTE122]
gi|433064372|ref|ZP_20251285.1| hypothetical protein WIO_03198 [Escherichia coli KTE125]
gi|433069257|ref|ZP_20256035.1| hypothetical protein WIQ_03141 [Escherichia coli KTE128]
gi|433179801|ref|ZP_20364189.1| hypothetical protein WGM_03445 [Escherichia coli KTE82]
gi|218433563|emb|CAR14466.1| putative enzyme [Escherichia coli UMN026]
gi|291426464|gb|EFE99496.1| UPF0001 protein yggS [Escherichia coli FVEC1412]
gi|298277335|gb|EFI18851.1| yggS protein [Escherichia coli FVEC1302]
gi|331058465|gb|EGI30446.1| pyridoxal phosphate enzyme, YggS family [Escherichia coli TA143]
gi|388406987|gb|EIL67364.1| putative enzyme [Escherichia coli 576-1]
gi|430873786|gb|ELB97352.1| hypothetical protein WCA_03870 [Escherichia coli KTE2]
gi|430924389|gb|ELC45110.1| hypothetical protein WEK_03435 [Escherichia coli KTE26]
gi|430953299|gb|ELC72199.1| hypothetical protein A139_02905 [Escherichia coli KTE181]
gi|430987641|gb|ELD04171.1| hypothetical protein A15I_02837 [Escherichia coli KTE204]
gi|431067642|gb|ELD76158.1| hypothetical protein A195_02859 [Escherichia coli KTE235]
gi|431179973|gb|ELE79864.1| hypothetical protein A1W1_03318 [Escherichia coli KTE83]
gi|431199146|gb|ELE97908.1| hypothetical protein A1Y3_04047 [Escherichia coli KTE116]
gi|431312977|gb|ELG00957.1| hypothetical protein A1S9_04682 [Escherichia coli KTE50]
gi|431471880|gb|ELH51772.1| hypothetical protein A15E_03662 [Escherichia coli KTE202]
gi|431568317|gb|ELI41305.1| hypothetical protein WIK_03415 [Escherichia coli KTE122]
gi|431579688|gb|ELI52268.1| hypothetical protein WIO_03198 [Escherichia coli KTE125]
gi|431581317|gb|ELI53770.1| hypothetical protein WIQ_03141 [Escherichia coli KTE128]
gi|431699052|gb|ELJ64069.1| hypothetical protein WGM_03445 [Escherichia coli KTE82]
Length = 234
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I Q +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAQAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|89895634|ref|YP_519121.1| hypothetical protein DSY2888 [Desulfitobacterium hafniense Y51]
gi|89335082|dbj|BAE84677.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 233
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 69/105 (65%), Gaps = 6/105 (5%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
+L +V QR+ QAA +S R P I+++AVSKT +++ YEAG R F EN VQE +K
Sbjct: 6 SLSAVRQRIQQAAVKSGRDPSAIKLLAVSKTMSAGTVQRAYEAGQRSFAENRVQEWQDKV 65
Query: 99 AQLPDDLEWHFIGNLQSNKVK------PLLAGVPNLAMVESVDNE 137
QLP+D EWH IG LQ+NKVK L+ + L+++E+++++
Sbjct: 66 TQLPEDCEWHLIGRLQTNKVKYLDERINLIHSLDRLSLLETLESQ 110
>gi|386742595|ref|YP_006215774.1| PLP-binding domain-containing protein [Providencia stuartii MRSN
2154]
gi|384479288|gb|AFH93083.1| PLP-binding domain-containing protein [Providencia stuartii MRSN
2154]
Length = 231
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V R+ +AA R I ++AVSKTKP I + EAG R FGENYVQE VEK
Sbjct: 7 ISDVKARIERAAAECHRSAQDITLLAVSKTKPCDAILEAIEAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D DL WHFIG LQSNK + L+A + ++D +KIA RLN + + PL V
Sbjct: 67 FFADRQDLVWHFIGPLQSNKSR-LVA--EHFDWFHTLDRQKIAQRLNDQRPS-NKAPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|183596314|ref|ZP_02958342.1| hypothetical protein PROSTU_00049 [Providencia stuartii ATCC 25827]
gi|188023918|gb|EDU61958.1| pyridoxal phosphate enzyme, YggS family [Providencia stuartii ATCC
25827]
Length = 231
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V R+ +AA R I ++AVSKTKP I + EAG R FGENYVQE VEK
Sbjct: 7 ISDVKARIERAAAECHRSAQDITLLAVSKTKPCDAILEAIEAGQRQFGENYVQEGVEKIQ 66
Query: 100 QLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
D DL WHFIG LQSNK + L+A + ++D +KIA RLN + + PL V
Sbjct: 67 FFADRQDLVWHFIGPLQSNKSR-LVA--EHFDWFHTLDRQKIAQRLNDQRPS-NKAPLNV 122
Query: 158 LVQVNTSGE 166
L+Q+N S E
Sbjct: 123 LIQINISDE 131
>gi|262280014|ref|ZP_06057799.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260365|gb|EEY79098.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 235
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ +A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE +EK
Sbjct: 12 ARQHVLQQIRRACEHAQRAPETVQLLAVSKTHPSESLREMYAAGQRAFGENYLQEALEKI 71
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D ++EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 72 EALQDLEIEWHFIGHVQRNKTKNL---AEKFDWVHGVDRLIIAERLSNQ-RLQDQSDLNI 127
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 128 CLQVNIDGQD 137
>gi|325294730|ref|YP_004281244.1| hypothetical protein Dester_0534 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065178|gb|ADY73185.1| protein of unknown function UPF0001 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 228
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
++ + +R+ +A ER+ R PD + I+A SKT+ IR+ +EAG + FGEN VQE EK
Sbjct: 7 VKRIKERIEKACERAKRNPDEVFILAASKTRAPEEIRKAFEAGIKLFGENRVQEAREKIP 66
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L D +EWH IG+LQ NKVK V ++ESVD++++A L + + +G+K L+V
Sbjct: 67 LLSDIPIEWHMIGHLQKNKVK---YAVNLFKVIESVDSKELADELEKRLSKIGKK-LEVF 122
Query: 159 VQVNTSGEE 167
++V S EE
Sbjct: 123 IEVKLSPEE 131
>gi|346976515|gb|EGY19967.1| hypothetical protein VDAG_01983 [Verticillium dahliae VdLs.17]
Length = 260
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
Query: 38 TALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVY-EAGHRCFGENYVQEIVE 96
T L SV R+ AA+ RP +R+VAVSK KP + I ++ +A FGENY QE+++
Sbjct: 19 TQLESVTARLTSAAK--GRP---VRLVAVSKLKPANDILALHRDASVVHFGENYAQELIQ 73
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR-----MVETMG 151
K LP L WHFIG LQS K LA +PNL V SVD+ K A LN + G
Sbjct: 74 KVDLLPSTLRWHFIGGLQSGHAKK-LAHIPNLFCVSSVDSLKKARLLNSARADLLARGQG 132
Query: 152 RKPLKVLVQVNTSGEE 167
L V VQVNTSGEE
Sbjct: 133 VDKLNVHVQVNTSGEE 148
>gi|323345163|ref|ZP_08085387.1| cell division protein YlmE [Prevotella oralis ATCC 33269]
gi|323094433|gb|EFZ37010.1| cell division protein YlmE [Prevotella oralis ATCC 33269]
Length = 224
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P+ +R+VAVSK P I Y G R FGE++ QE+ +KAA LP D+EWHFIG+LQ+NK
Sbjct: 17 PEGVRLVAVSKFHPDEYIEAAYAEGQRVFGESHEQELSKKAATLPKDIEWHFIGHLQTNK 76
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEEYGECFIKCSW 177
VK + VP ++M+++VD+ K+ +++ GR ++V+++++ + EE F +
Sbjct: 77 VKHI---VPYISMIDAVDSLKLLREIDKQAARCGR-VIRVMLELHIAEEETKYGFSR--- 129
Query: 178 SHSCLLMI 185
CL M+
Sbjct: 130 -QDCLDML 136
>gi|398900558|ref|ZP_10649586.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM50]
gi|398180958|gb|EJM68532.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM50]
Length = 228
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ AA+ + R + I+++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VSSRIQAAAKAAHRDENSIQLLAVSKTKPAEALREAYAAGLRDFGENYLQEALSKQLELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + A + V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLIWHFIGPIQSNKTR---AIAEHFDWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|255035778|ref|YP_003086399.1| alanine racemase domain-containing protein [Dyadobacter fermentans
DSM 18053]
gi|254948534|gb|ACT93234.1| alanine racemase domain protein [Dyadobacter fermentans DSM 18053]
Length = 220
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+VAV+KTKP +++ + YEAG R FGEN VQE+V K +LP D+EWH IG+LQ+NKVK +
Sbjct: 20 RLVAVTKTKPTTLLMEAYEAGARLFGENKVQEMVAKYEELPKDIEWHMIGHLQTNKVKYM 79
Query: 122 LAGVPNLAMVESVDNEKIAGRLNR 145
P +++V SVD+ K+ +N+
Sbjct: 80 ---APFVSLVHSVDSFKLLKEINK 100
>gi|29346742|ref|NP_810245.1| hypothetical protein BT_1332 [Bacteroides thetaiotaomicron
VPI-5482]
gi|380695972|ref|ZP_09860831.1| hypothetical protein BfaeM_18682 [Bacteroides faecis MAJ27]
gi|29338639|gb|AAO76439.1| putative racemase [Bacteroides thetaiotaomicron VPI-5482]
Length = 224
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y+AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PQGVRLVAVSKFHPNEAIEEAYQAGQRIFGESKVQEMTAKYETLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+K + +P + M+ +D K+ +N+ GR + L+Q++ + EE
Sbjct: 75 IKYM---IPYVEMIHGIDTYKLLAEVNKQAAKAGR-IVNCLIQIHVAQEE 120
>gi|359394173|ref|ZP_09187226.1| UPF0001 protein PM [Halomonas boliviensis LC1]
gi|357971420|gb|EHJ93865.1| UPF0001 protein PM [Halomonas boliviensis LC1]
Length = 238
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 6/125 (4%)
Query: 45 QRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD- 103
+R+ A E + R D +++AVSKTKP ++IRQ ++ G R FGENY+QE +EK +L D
Sbjct: 19 ERLRNALENAGRTQDAAQLLAVSKTKPAAMIRQAWQLGQREFGENYLQEALEKQNELTDL 78
Query: 104 -DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVN 162
+ WHFIG LQSNK + + + V SVD KIA RL+ T PL + +QVN
Sbjct: 79 EGIVWHFIGPLQSNKTRSV---AEHFDWVHSVDRLKIAKRLSEQRPTH-LSPLNICLQVN 134
Query: 163 TSGEE 167
S E+
Sbjct: 135 ISRED 139
>gi|299771278|ref|YP_003733304.1| hypothetical protein AOLE_15220 [Acinetobacter oleivorans DR1]
gi|298701366|gb|ADI91931.1| hypothetical protein AOLE_15220 [Acinetobacter oleivorans DR1]
Length = 230
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ +A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIQRACEHAQRSPETVQLLAVSKTHPSESLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D ++EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 EALQDLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RLQNQSDLNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|260767465|ref|ZP_05876402.1| hypothetical protein VFA_000516 [Vibrio furnissii CIP 102972]
gi|260617577|gb|EEX42759.1| hypothetical protein VFA_000516 [Vibrio furnissii CIP 102972]
Length = 235
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L + ++ A ++ R ++++AVSKTKPV I + EAG R FGENYVQE +K
Sbjct: 8 LEHITSQIENAQQKCGRSRSSVQLLAVSKTKPVEAILEAAEAGQRAFGENYVQEGCDKVQ 67
Query: 98 --AAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
A P+ +LEWHFIG LQSNK + L+A + + ++D KIA RL+ P
Sbjct: 68 FFAEHHPELNLEWHFIGPLQSNKTR-LIA--EHFDWMHTIDRAKIAQRLSEQ-RPAHLPP 123
Query: 155 LKVLVQVNTSGE 166
L+VL+QVNTSGE
Sbjct: 124 LQVLIQVNTSGE 135
>gi|92115169|ref|YP_575097.1| hypothetical protein Csal_3054 [Chromohalobacter salexigens DSM
3043]
gi|91798259|gb|ABE60398.1| Protein of unknown function UPF0001 [Chromohalobacter salexigens
DSM 3043]
Length = 235
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--D 103
R+ A + R P ++AVSKT+P + +RQ +EAG R FGENYVQE ++K A L D
Sbjct: 16 RLRTALTNAGRDPASAHLLAVSKTQPAASVRQAFEAGQREFGENYVQEALDKQAALTDLD 75
Query: 104 DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRMVETMGRKPLKVLVQVN 162
+ WHFIG LQSNK + A + V ++D E+IA RL + +G PL V +QVN
Sbjct: 76 AIVWHFIGPLQSNKTR---AVAEHFQWVHTLDRERIARRLAAQRPPALG--PLDVCLQVN 130
Query: 163 TSGE 166
SGE
Sbjct: 131 VSGE 134
>gi|60682296|ref|YP_212440.1| racemase [Bacteroides fragilis NCTC 9343]
gi|60493730|emb|CAH08519.1| putative racemase [Bacteroides fragilis NCTC 9343]
Length = 222
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P I + Y AG R FGE+ VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 15 PSGVRLVAVSKFHPNEAIEEAYRAGQRIFGESKVQEMTGKYESLPKDIEWHFIGHLQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
+K + P ++M+ +D+ K+ +N+ K ++ L+Q++ + EE +G F +C
Sbjct: 75 IKYM---APYVSMIHGIDSYKLLAEVNKQA-IKAEKVIRCLLQIHIAQEETKFGFSFDEC 130
>gi|335420448|ref|ZP_08551486.1| alanine racemase domain-containing protein [Salinisphaera
shabanensis E1L3A]
gi|334894807|gb|EGM32992.1| alanine racemase domain-containing protein [Salinisphaera
shabanensis E1L3A]
Length = 233
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A AL V R+ AA ++R P I +VAVSKTKPV+++R + G R FGENY+Q+ +
Sbjct: 10 ADALDKVRNRIALAAHAANRDPADITLVAVSKTKPVALVRDALDHGQRDFGENYLQDALA 69
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K L + + WHFIG++QSNK + + + N + ++D KIA RL+ G PL
Sbjct: 70 KIDALTEREPLWHFIGDIQSNKTRDIAS---NFSWAHAIDRFKIARRLSDQ-RPEGYAPL 125
Query: 156 KVLVQVNTSGE 166
+ +QVN GE
Sbjct: 126 NLCIQVNIDGE 136
>gi|358396923|gb|EHK46298.1| hypothetical protein TRIATDRAFT_141044 [Trichoderma atroviride IMI
206040]
Length = 252
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEK 97
L SV R+ AA+ + +R+VAVSK KP + I +++ A H FGENY QE+ +K
Sbjct: 15 LSSVKDRIAAAAQGRN-----VRLVAVSKLKPANDILALHQTPASHSHFGENYAQELSQK 69
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-LK 156
A LP + WHFIG LQS K LA +PNL V SVD+ K A LN ++ P L
Sbjct: 70 ADLLPRTIHWHFIGGLQSGHCKN-LAKIPNLFCVSSVDSLKKAQLLNSARTSIPDLPKLN 128
Query: 157 VLVQVNTSGEE 167
+ VQVNTSGEE
Sbjct: 129 IHVQVNTSGEE 139
>gi|227325976|ref|ZP_03830000.1| putative alanine racemase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 237
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + Q++ AA +R P+ I ++AVSKTKPVS I + AG R FGENYVQE VEK
Sbjct: 8 LQDIRQQIATAAAHCARAPEEITLLAVSKTKPVSAIEEAIAAGQRAFGENYVQEGVEKIH 67
Query: 100 QL----PDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
PD LEWHFIG LQSNK + L+A N +VD +IA RL+ P
Sbjct: 68 YFQENHPDTPLEWHFIGPLQSNKSR-LVAE--NFDWFHTVDRLRIAQRLSEQ-RPATLPP 123
Query: 155 LKVLVQVNTSGE 166
L VL+Q+N SGE
Sbjct: 124 LNVLLQINISGE 135
>gi|421656592|ref|ZP_16096897.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-72]
gi|408504919|gb|EKK06649.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-72]
Length = 230
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|312143931|ref|YP_003995377.1| alanine racemase [Halanaerobium hydrogeniformans]
gi|311904582|gb|ADQ15023.1| alanine racemase domain protein [Halanaerobium hydrogeniformans]
Length = 234
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 88/134 (65%), Gaps = 7/134 (5%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
+ + +++ +AAERS R + I+++AVSKT+ + I+ + E G CFGEN VQE+ EK A+
Sbjct: 11 QKIDEKIRKAAERSGRKREDIKLLAVSKTQSSAEIKALKELGVCCFGENRVQELEEKDAE 70
Query: 101 LPDD---LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L + ++WHF+G+LQ NKVK L+ + N M+ESVD+ ++A +N+ R + V
Sbjct: 71 LKSEDIVIDWHFVGHLQRNKVKYLMR-MENCKMIESVDSFRLAKEVNKRARKNDR-IIPV 128
Query: 158 LVQVNTSGEE--YG 169
L+Q+N + ++ YG
Sbjct: 129 LIQINIAEDDNKYG 142
>gi|110639046|ref|YP_679255.1| hypothetical protein CHU_2661 [Cytophaga hutchinsonii ATCC 33406]
gi|110281727|gb|ABG59913.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 220
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
R+ P ++AV+KT PV V++Q Y +G R FGEN VQE++ KA LP D++WH IG+
Sbjct: 10 RTFLTPYNTTLIAVTKTHPVEVLQQAYSSGLRIFGENKVQELISKAEVLPKDIQWHLIGH 69
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
LQSNKVK + P + M+ SVD+ K+ +N+ + ++ + L+QV + E+
Sbjct: 70 LQSNKVKYI---APFIYMIHSVDSFKLLQEINKEAKK-NKRVIACLLQVYIANED 120
>gi|417544317|ref|ZP_12195403.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC032]
gi|421666933|ref|ZP_16107015.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC087]
gi|421670780|ref|ZP_16110764.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC099]
gi|400382205|gb|EJP40883.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC032]
gi|410383660|gb|EKP36187.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC099]
gi|410386405|gb|EKP38876.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC087]
gi|452954207|gb|EME59611.1| hypothetical protein G347_02875 [Acinetobacter baumannii MSP4-16]
Length = 230
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|346323820|gb|EGX93418.1| alanine racemase family protein (ISS) [Cordyceps militaris CM01]
Length = 256
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAG--HRCFGENYVQEIVEK 97
L SV QR+ + P +R+VAVSK KP + I +++A H FGENY QE+ +K
Sbjct: 15 LSSVQQRI-----AALNPGRNVRLVAVSKLKPANDILALHQAPAHHLYFGENYAQELTQK 69
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP--- 154
AA LP + WHFIG LQS K LA VPNL V SVD K AG L+ +
Sbjct: 70 AALLPPTVRWHFIGGLQSGHCK-ALARVPNLVCVSSVDTAKKAGLLHAARAALRDADPAV 128
Query: 155 --LKVLVQVNTSGEE 167
L V VQVNTSGEE
Sbjct: 129 PRLAVHVQVNTSGEE 143
>gi|422349735|ref|ZP_16430624.1| YggS family pyridoxal phosphate enzyme [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657944|gb|EKB30824.1| YggS family pyridoxal phosphate enzyme [Sutterella wadsworthensis
2_1_59BFAA]
Length = 242
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 75/124 (60%), Gaps = 10/124 (8%)
Query: 50 AAERSS-RPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL----PDD 104
AAER++ RP +R++AV KT PV + Y G R FGENYVQE VEK P+D
Sbjct: 21 AAERAAGRPAGSVRLIAVGKTFPVEACEEAYACGQRAFGENYVQEGVEKIVHFRAVHPED 80
Query: 105 L-EWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNT 163
EWHFIG LQ+NK + L+A + V+SVD +IA RL+ G PL +L++VN
Sbjct: 81 PGEWHFIGPLQANKTR-LVA--EHFDWVQSVDRLRIASRLSAQ-RPAGMPPLNILIEVNI 136
Query: 164 SGEE 167
GEE
Sbjct: 137 DGEE 140
>gi|432366417|ref|ZP_19609535.1| hypothetical protein WCM_00341 [Escherichia coli KTE10]
gi|430891756|gb|ELC14277.1| hypothetical protein WCM_00341 [Escherichia coli KTE10]
Length = 234
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP SVI + +AG R FGENYVQE ++K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASVIAEAIDAGQRQFGENYVQEGIDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVPGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|419718709|ref|ZP_14246015.1| pyridoxal phosphate enzyme, YggS family [Lachnoanaerobaculum
saburreum F0468]
gi|383305049|gb|EIC96428.1| pyridoxal phosphate enzyme, YggS family [Lachnoanaerobaculum
saburreum F0468]
Length = 226
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V + + A E+S R + + ++AVSKTKP +I + YEAG R FGEN VQE+V K
Sbjct: 6 LENVERNIKLACEKSGRDINDVTLIAVSKTKPNELIMEAYEAGIRDFGENKVQELVRKCE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN 144
+LP D+ WH IG+LQ+NKV+ LL N ++ S+D+ ++A ++
Sbjct: 66 ELPKDIRWHMIGHLQTNKVRQLLG---NTVLIHSIDSIRLADTID 107
>gi|326475792|gb|EGD99801.1| alanine racemase [Trichophyton tonsurans CBS 112818]
Length = 301
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 74/127 (58%), Gaps = 19/127 (14%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
PP +R+VAVSK KP S I ++ H FGENY+QE++EK+ LP ++ WHFIG LQ
Sbjct: 66 PP--VRLVAVSKLKPASDILALHSPPTSHLHFGENYMQELLEKSKALPPEIRWHFIGGLQ 123
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------------MVETMGRKPLKVLVQ 160
SNK L V L VESVD EK A L++ E + R+ L+V VQ
Sbjct: 124 SNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKESEAGEPLDRR-LRVFVQ 182
Query: 161 VNTSGEE 167
VNTSGEE
Sbjct: 183 VNTSGEE 189
>gi|119503505|ref|ZP_01625588.1| hypothetical protein MGP2080_03160 [marine gamma proteobacterium
HTCC2080]
gi|119460567|gb|EAW41659.1| hypothetical protein MGP2080_03160 [marine gamma proteobacterium
HTCC2080]
Length = 228
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
AT L V +R+ +A + ++R + ++AVSKTKP IR +EAG R FGENY QE E
Sbjct: 7 ATNLHRVWRRIGEAEQLANRHSGSVSLLAVSKTKPDRYIRAAWEAGQRAFGENYAQEAEE 66
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
KA +L D +EWHFIG +QSNK + L +A V S+D KIA RL+ PL
Sbjct: 67 KARRLDDLTIEWHFIGPIQSNKTRGL---AETMAWVHSIDRLKIARRLSDQ-RPQHLPPL 122
Query: 156 KVLVQVNTSGE 166
+ +QV S E
Sbjct: 123 NLCLQVKLSDE 133
>gi|322513925|ref|ZP_08067002.1| YggS family pyridoxal phosphate enzyme [Actinobacillus ureae ATCC
25976]
gi|322120260|gb|EFX92213.1| YggS family pyridoxal phosphate enzyme [Actinobacillus ureae ATCC
25976]
Length = 231
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 61 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKV 118
+R++AVSKTKPV I + AG FGENYVQE VEK A +LEWHFIG LQSNK
Sbjct: 26 VRLLAVSKTKPVEAIEEAISAGQTAFGENYVQEGVEKIAYFAQQPNLEWHFIGPLQSNKT 85
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGE 166
+ L+A N +++VD KIA RLN + PL VL+Q+N S E
Sbjct: 86 R-LVA--ENFDWIQTVDRLKIAERLNAQCPE-NKAPLNVLIQINISDE 129
>gi|184157169|ref|YP_001845508.1| TIM-barrel fold family protein [Acinetobacter baumannii ACICU]
gi|332874170|ref|ZP_08442094.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6014059]
gi|384130846|ref|YP_005513458.1| TIM-barrel fold family protein [Acinetobacter baumannii 1656-2]
gi|385236435|ref|YP_005797774.1| TIM-barrel fold family protein [Acinetobacter baumannii
TCDC-AB0715]
gi|387124917|ref|YP_006290799.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
MDR-TJ]
gi|407931774|ref|YP_006847417.1| pyridoxal phosphate protein [Acinetobacter baumannii TYTH-1]
gi|416146293|ref|ZP_11601067.1| TIM-barrel fold family protein [Acinetobacter baumannii AB210]
gi|417570990|ref|ZP_12221847.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC189]
gi|417576068|ref|ZP_12226913.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-17]
gi|417871839|ref|ZP_12516763.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH1]
gi|417872569|ref|ZP_12517467.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH2]
gi|417876975|ref|ZP_12521717.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH3]
gi|417883049|ref|ZP_12527317.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH4]
gi|421202176|ref|ZP_15659327.1| tim-barrel fold family protein [Acinetobacter baumannii AC12]
gi|421535718|ref|ZP_15981977.1| TIM-barrel fold family protein [Acinetobacter baumannii AC30]
gi|421631114|ref|ZP_16071803.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC180]
gi|421689202|ref|ZP_16128886.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-143]
gi|421702514|ref|ZP_16141994.1| hypothetical protein B825_04631 [Acinetobacter baumannii ZWS1122]
gi|421706325|ref|ZP_16145741.1| hypothetical protein B837_04641 [Acinetobacter baumannii ZWS1219]
gi|421792474|ref|ZP_16228627.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-2]
gi|424053397|ref|ZP_17790929.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab11111]
gi|424062947|ref|ZP_17800432.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab44444]
gi|425752545|ref|ZP_18870452.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-113]
gi|445481253|ref|ZP_21455789.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-78]
gi|183208763|gb|ACC56161.1| predicted enzyme with a TIM-barrel fold [Acinetobacter baumannii
ACICU]
gi|322507066|gb|ADX02520.1| TIM-barrel fold family protein [Acinetobacter baumannii 1656-2]
gi|323516933|gb|ADX91314.1| TIM-barrel fold family protein [Acinetobacter baumannii
TCDC-AB0715]
gi|332737645|gb|EGJ68548.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
6014059]
gi|333366397|gb|EGK48411.1| TIM-barrel fold family protein [Acinetobacter baumannii AB210]
gi|342224401|gb|EGT89437.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH1]
gi|342233481|gb|EGT98209.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH2]
gi|342236601|gb|EGU01115.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH4]
gi|342236662|gb|EGU01173.1| TIM-barrel fold family protein [Acinetobacter baumannii ABNIH3]
gi|385879409|gb|AFI96504.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
MDR-TJ]
gi|395551438|gb|EJG17447.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC189]
gi|395569289|gb|EJG29951.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-17]
gi|398328131|gb|EJN44258.1| tim-barrel fold family protein [Acinetobacter baumannii AC12]
gi|404558582|gb|EKA63863.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-143]
gi|404669185|gb|EKB37092.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab11111]
gi|404674949|gb|EKB42674.1| YggS family pyridoxal phosphate enzyme [Acinetobacter baumannii
Ab44444]
gi|407193967|gb|EKE65115.1| hypothetical protein B825_04631 [Acinetobacter baumannii ZWS1122]
gi|407194255|gb|EKE65398.1| hypothetical protein B837_04641 [Acinetobacter baumannii ZWS1219]
gi|407900355|gb|AFU37186.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
TYTH-1]
gi|408695280|gb|EKL40836.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC180]
gi|409986560|gb|EKO42754.1| TIM-barrel fold family protein [Acinetobacter baumannii AC30]
gi|410400054|gb|EKP52234.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-2]
gi|425498776|gb|EKU64842.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-113]
gi|444770606|gb|ELW94756.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-78]
Length = 230
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|421674918|ref|ZP_16114844.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC065]
gi|421693449|ref|ZP_16133091.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-116]
gi|404557952|gb|EKA63240.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
IS-116]
gi|410382933|gb|EKP35467.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC065]
Length = 230
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|315651406|ref|ZP_07904431.1| cell division protein YlmE [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486365|gb|EFU76722.1| cell division protein YlmE [Lachnoanaerobaculum saburreum DSM 3986]
Length = 226
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V + + A E+S R + + ++AVSKTKP +I + YEAG R FGEN VQE+V K
Sbjct: 6 LENVERNIKLACEKSGRDINDVTLIAVSKTKPNELIMEAYEAGIRDFGENKVQELVRKCE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN 144
+LP D+ WH IG+LQ+NKV+ LL N ++ S+D+ ++A ++
Sbjct: 66 ELPKDIRWHMIGHLQTNKVRQLLG---NTVLIHSIDSIRLADTID 107
>gi|238763261|ref|ZP_04624226.1| alanine racemase [Yersinia kristensenii ATCC 33638]
gi|238698534|gb|EEP91286.1| alanine racemase [Yersinia kristensenii ATCC 33638]
Length = 231
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 17/137 (12%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V ++ AA R P+ + ++AVSKTKPVS I + AG FGENYVQE V+K
Sbjct: 8 LQDVRAQIATAARNCGRSPEEVTLLAVSKTKPVSAIEEAIAAGQYAFGENYVQEGVDKIH 67
Query: 100 QLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
D+ LEWHFIG LQSNK + L+A N A +VD KIA RL+ R P
Sbjct: 68 YFADNAPSAHLEWHFIGPLQSNKSR-LVA--ENFAWCHTVDRLKIAQRLSAQ-----RPP 119
Query: 155 ----LKVLVQVNTSGEE 167
L +L+QVN S E+
Sbjct: 120 EMPALNILIQVNISDEQ 136
>gi|326483235|gb|EGE07245.1| alanine racemase [Trichophyton equinum CBS 127.97]
Length = 301
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 74/127 (58%), Gaps = 19/127 (14%)
Query: 57 PPDRIRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQ 114
PP +R+VAVSK KP S I ++ H FGENY+QE++EK+ LP ++ WHFIG LQ
Sbjct: 66 PP--VRLVAVSKLKPASDILALHSPPTSHLHFGENYMQELLEKSKALPPEIRWHFIGGLQ 123
Query: 115 SNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------------MVETMGRKPLKVLVQ 160
SNK L V L VESVD EK A L++ E + R+ L+V VQ
Sbjct: 124 SNKCVTLAREVRGLWAVESVDTEKKASLLDKGWGERAEFKQKESEAGEPLDRR-LRVFVQ 182
Query: 161 VNTSGEE 167
VNTSGEE
Sbjct: 183 VNTSGEE 189
>gi|397163702|ref|ZP_10487160.1| hypothetical protein Y71_3941 [Enterobacter radicincitans DSM
16656]
gi|396094257|gb|EJI91809.1| hypothetical protein Y71_3941 [Enterobacter radicincitans DSM
16656]
Length = 234
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 76/132 (57%), Gaps = 8/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA + R P + ++AVSKTKP S + + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATQCGRAPAEVTLLAVSKTKPASAVAEAIDAGQRAFGENYVQEGVDKIL 67
Query: 100 QL----PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
DDL+WHFIG LQSNK + L+A + ++D +IA RL+ PL
Sbjct: 68 HFREAGVDDLQWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIASRLSEQ-RPADLPPL 123
Query: 156 KVLVQVNTSGEE 167
VL+QVN S E+
Sbjct: 124 NVLIQVNISDEQ 135
>gi|260555789|ref|ZP_05828009.1| TIM-barrel fold family protein [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|260410700|gb|EEX03998.1| TIM-barrel fold family protein [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
Length = 235
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 12 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 71
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 72 DALQDLDIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 127
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 128 CLQVNIDGQE 137
>gi|89091926|ref|ZP_01164881.1| hypothetical protein MED92_07161 [Neptuniibacter caesariensis]
gi|89083661|gb|EAR62878.1| hypothetical protein MED92_07161 [Oceanospirillum sp. MED92]
Length = 236
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V Q++ A +S+R + I ++AVSKT+P +R YE G R FGENY+QE +E
Sbjct: 5 AKNLEKVRQQIADTAVQSNRQSNEITLLAVSKTRPADDLRSAYEEGQRHFGENYLQESLE 64
Query: 97 KAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN-RMVETMGRKP 154
K L D D+ WHFIG LQSNK + + N + +VD KIA RL+ + E + P
Sbjct: 65 KIQSLSDLDICWHFIGPLQSNKTRTV---AENFDWMHTVDRLKIAQRLSAQRPEQLA--P 119
Query: 155 LKVLVQVNTSGEE 167
L + +QVN S E+
Sbjct: 120 LNICIQVNISNED 132
>gi|445408187|ref|ZP_21432589.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-57]
gi|444780790|gb|ELX04718.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
Naval-57]
Length = 230
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIQTACEHVQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|445446442|ref|ZP_21443320.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-A-92]
gi|444760253|gb|ELW84707.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-A-92]
Length = 230
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKYL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 123 CLQVNIDGQE 132
>gi|424743018|ref|ZP_18171335.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-141]
gi|422943663|gb|EKU38676.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
WC-141]
Length = 230
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ +A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIQRACEHAQRAPETVQLLAVSKTHPSESLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D ++EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 EALHDLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RLQDQSDLNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|384142135|ref|YP_005524845.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|347592628|gb|AEP05349.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
Length = 235
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 12 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 71
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 72 DALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 127
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 128 CLQVNIDGQE 137
>gi|186477265|ref|YP_001858735.1| alanine racemase domain-containing protein [Burkholderia phymatum
STM815]
gi|184193724|gb|ACC71689.1| alanine racemase domain protein [Burkholderia phymatum STM815]
Length = 232
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V QR+ AA + R P I ++AVSKT P +R + AG R FGENYVQE + K
Sbjct: 8 LDAVHQRIALAARIAGRDPGSIALLAVSKTFPAEDVRAAHVAGQRAFGENYVQEALTKIG 67
Query: 100 QLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
L D L WHFIG LQSNK +P+ + V SVD KIA RL+ L
Sbjct: 68 ALSDLRASLAWHFIGPLQSNKTRPV---AEHFDWVHSVDRLKIAQRLSEQRPDTA-PALN 123
Query: 157 VLVQVNTSGE 166
V +QVN SGE
Sbjct: 124 VCLQVNISGE 133
>gi|409099727|ref|ZP_11219751.1| alanine racemase [Pedobacter agri PB92]
Length = 232
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
+S D ++++AVSKT+ IR+ Y+AG R FGEN+VQE+VEK +LP D+EWH IG+
Sbjct: 11 KSEVESDGVKLIAVSKTQTEEAIREAYDAGQRIFGENHVQEMVEKEEKLPKDIEWHLIGH 70
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
LQ+NKVK + P + ++ VD+ K+ +N+ ++ + L+QV + E+
Sbjct: 71 LQTNKVKYI---APFVKLIHGVDSLKLLQEINKQA-LKNKRIIDCLLQVYIADED 121
>gi|398870079|ref|ZP_10625431.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM74]
gi|398209651|gb|EJM96320.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM74]
Length = 228
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+H A ++R + +R++AVSKTKP +R+ Y AG FGENY+QE + K +L
Sbjct: 11 VSSRIHAATRAANRAENSVRLLAVSKTKPAQDLREAYAAGLHDFGENYLQEALGKQVELA 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQV 161
D L WHFIG +QSNK + + + V SVD KIA RL+ PL + +QV
Sbjct: 71 DLPLIWHFIGPIQSNKTRAI---AEHFDWVHSVDRLKIAQRLSEQ-RPADLPPLNICIQV 126
Query: 162 NTSGE 166
N SGE
Sbjct: 127 NVSGE 131
>gi|350639210|gb|EHA27564.1| hypothetical protein ASPNIDRAFT_135497 [Aspergillus niger ATCC
1015]
Length = 267
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 78/135 (57%), Gaps = 16/135 (11%)
Query: 46 RVHQAAERS--SRPPDRIRIVAVSKTKPVSVIRQVYE---AGHRCFGENYVQEIVEKAAQ 100
R++ A S S PP R+VAVSK KP S I ++ A FGENY+QE+ EKA
Sbjct: 22 RINTATTSSPKSTPP---RLVAVSKLKPASDILTLHTNPPAHQTHFGENYLQELQEKARL 78
Query: 101 LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------MVETMGR 152
LP ++WHFIG LQSNK L P L VESVD+ K A L++ + ET
Sbjct: 79 LPTTIKWHFIGGLQSNKCVTLARDTPALWAVESVDSTKKASLLDKGWGERSAEVKETNHE 138
Query: 153 KPLKVLVQVNTSGEE 167
+ L+V VQVNTSGEE
Sbjct: 139 ERLRVFVQVNTSGEE 153
>gi|255532810|ref|YP_003093182.1| alanine racemase domain-containing protein [Pedobacter heparinus
DSM 2366]
gi|255345794|gb|ACU05120.1| alanine racemase domain protein [Pedobacter heparinus DSM 2366]
Length = 229
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
+S P ++++AVSK + + + Y AG R FGEN VQE+V+K A+LP D+EWH IG+
Sbjct: 11 KSELDPAGVKLIAVSKYQEADAVLEAYNAGQRIFGENIVQELVDKQAKLPQDIEWHLIGH 70
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGE 170
LQ+NKVK + P +++++SVD+ K+ +N+ ++ + L+Q+ + E+ +G
Sbjct: 71 LQTNKVKYI---APFISLIQSVDSLKLLAEINKQA-AKNKRVIDCLLQIYIADEDTKFGL 126
Query: 171 CF 172
F
Sbjct: 127 GF 128
>gi|416077294|ref|ZP_11585838.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|416093750|ref|ZP_11588495.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444349143|ref|ZP_21156655.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348004091|gb|EGY44622.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348008715|gb|EGY48958.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|443545314|gb|ELT55136.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 231
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 8 LQLVQQKITQICHMIGSSPSAVTLLAVSKTKPVEDILTAYEAGQEAFGENYVQEGVEKIQ 67
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 68 FCQQHNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQ-RSPHKAPLN 123
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 124 VLIQVNISNE 133
>gi|257095145|ref|YP_003168786.1| alanine racemase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047669|gb|ACV36857.1| alanine racemase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 229
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V+ R+ AA R R P + ++AVSKT P +R+ AG R FGE+Y+QE ++K A
Sbjct: 8 LQAVLARIACAARRWGRDPADVLLLAVSKTWPAECLREAAAAGQRAFGESYLQEGIDKVA 67
Query: 100 QL-PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L LEWHFIG LQ+NK +P+ V S+D ++A RL+ + L V
Sbjct: 68 ELRAMGLEWHFIGTLQANKTRPV---AETFDWVHSLDRLRVAERLSAQ-RPLSLPSLSVC 123
Query: 159 VQVNTSGE 166
+QVN SGE
Sbjct: 124 LQVNVSGE 131
>gi|225718710|gb|ACO15201.1| Proline synthetase co-transcribed bacterial homolog protein
[Caligus clemensi]
Length = 248
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 26 MAASAATDGVAATALRSVIQRVHQAAERSS---RPPDRIRIVAVSKTKPVSVIRQVYEAG 82
M+AS A + L V++++ E++S R + ++AVSKTKP I + Y AG
Sbjct: 9 MSASVADN------LMCVLEKIRVTYEKTSPETRSKNLPNLIAVSKTKPKENIIEAYNAG 62
Query: 83 HRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKI 139
R FGENYVQE++EK+ +L ++ WHFIG+LQS V LL V NL+++ ++ + +
Sbjct: 63 QRHFGENYVQELLEKSTELESTCPEISWHFIGSLQSKNVSKLLK-VRNLSVLHTLSSRSL 121
Query: 140 AGRLNRMVETMGRKPLKVLVQVNTSGE 166
A +L + L VLVQVN SGE
Sbjct: 122 ADKLQNATQARDIPSLSVLVQVNVSGE 148
>gi|365967953|ref|YP_004949515.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365746866|gb|AEW77771.1| succinyl-diaminopimelate desuccinylase [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 231
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK-- 97
L+ V Q++ Q P + ++AVSKTKPV I YEAG FGENYVQE VEK
Sbjct: 8 LQLVQQKITQICHMIGSSPSAVTLLAVSKTKPVEDILTAYEAGQEVFGENYVQEGVEKIQ 67
Query: 98 -AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
Q +LEWHFIG LQSNK + L+A ++++D KIA RLN + + PL
Sbjct: 68 FCQQHNINLEWHFIGPLQSNKTR-LVAEY--FDWMQTLDRAKIADRLNEQ-RSPHKAPLN 123
Query: 157 VLVQVNTSGE 166
VL+QVN S E
Sbjct: 124 VLIQVNISNE 133
>gi|225419736|ref|ZP_03762039.1| hypothetical protein CLOSTASPAR_06074 [Clostridium asparagiforme
DSM 15981]
gi|225041626|gb|EEG51872.1| hypothetical protein CLOSTASPAR_06074 [Clostridium asparagiforme
DSM 15981]
Length = 227
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 82/133 (61%), Gaps = 8/133 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +RV+ A R+ R P + ++AVSKTKP +++ YEAG R FGEN VQEI++K
Sbjct: 7 LEEVRERVNAACLRAGRDPKSVTLIAVSKTKPAQAVQEAYEAGARDFGENKVQEILQKQP 66
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK-PLKVL 158
LP D+ WH IG+LQ NKV ++ ++ +VD+ ++A ++ + E R + VL
Sbjct: 67 ALPQDIRWHMIGHLQRNKVHQVIG---KAVLIHAVDSLRLAEQIEQ--EAAKRNLDVDVL 121
Query: 159 VQVNTSGEE--YG 169
+++N + EE YG
Sbjct: 122 LEINVAKEESKYG 134
>gi|354596254|ref|ZP_09014271.1| protein of unknown function UPF0001 [Brenneria sp. EniD312]
gi|353674189|gb|EHD20222.1| protein of unknown function UPF0001 [Brenneria sp. EniD312]
Length = 237
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 9/132 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ + Q++ AA+ +R P+ I ++AVSKTKPV+ I + EAG R FGENYVQE V+K
Sbjct: 8 LQDIRQQIAVAAQGCARAPEEITLLAVSKTKPVTAIEEAIEAGQRAFGENYVQEGVDKIL 67
Query: 100 QL----PDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
P+ LEWHFIG LQSNK + L+A + +VD +IA RL+ P
Sbjct: 68 YFREHSPETGLEWHFIGPLQSNKSR-LVA--EHFDWFHTVDRLRIAQRLSEQ-RPASLPP 123
Query: 155 LKVLVQVNTSGE 166
L VL+Q+N S E
Sbjct: 124 LNVLLQINISNE 135
>gi|145248690|ref|XP_001400684.1| alanine racemase family protein [Aspergillus niger CBS 513.88]
gi|134081351|emb|CAK41854.1| unnamed protein product [Aspergillus niger]
Length = 271
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 78/135 (57%), Gaps = 16/135 (11%)
Query: 46 RVHQAAERS--SRPPDRIRIVAVSKTKPVSVIRQVYE---AGHRCFGENYVQEIVEKAAQ 100
R++ A S S PP R+VAVSK KP S I ++ A FGENY+QE+ EKA
Sbjct: 26 RINTATTSSPKSTPP---RLVAVSKLKPASDILTLHTNPPAHQTHFGENYLQELQEKARL 82
Query: 101 LPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------MVETMGR 152
LP ++WHFIG LQSNK L P L VESVD+ K A L++ + ET
Sbjct: 83 LPTTIKWHFIGGLQSNKCVTLARDTPALWAVESVDSTKKASLLDKGWGERSAEVKETNHE 142
Query: 153 KPLKVLVQVNTSGEE 167
+ L+V VQVNTSGEE
Sbjct: 143 ERLRVFVQVNTSGEE 157
>gi|445435652|ref|ZP_21440372.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC021]
gi|444755402|gb|ELW79986.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC021]
Length = 230
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACEHAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + + L +
Sbjct: 67 EALHDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQRGDI-QAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|395217753|ref|ZP_10401756.1| alanine racemase [Pontibacter sp. BAB1700]
gi|394454851|gb|EJF09436.1| alanine racemase [Pontibacter sp. BAB1700]
Length = 153
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+VAVSKT P +I + Y AGHR FGEN VQE++EK LP D+ WH IG+LQ+NKVK +
Sbjct: 21 RLVAVSKTHPPEMIMEAYNAGHRIFGENKVQELLEKRDLLPHDIAWHLIGHLQTNKVKQI 80
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRK-PLKVLVQVNTSGEE--YG 169
+ ++SVD+ K+ +N+ E R P+ ++Q + + EE YG
Sbjct: 81 AQFIDT---IQSVDSLKLLIEINKRAEQFNRTLPVNCMLQFDIADEETKYG 128
>gi|385787207|ref|YP_005818316.1| protein YggS [Erwinia sp. Ejp617]
gi|310766479|gb|ADP11429.1| UPF0001 protein yggS [Erwinia sp. Ejp617]
Length = 266
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 76/129 (58%), Gaps = 5/129 (3%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V QR+ AA + R I ++AVSKTKP S I + AG CFGENYVQE V+K
Sbjct: 37 LQQVRQRISAAAAKCGRASQEITLLAVSKTKPASAIEEAVAAGQCCFGENYVQEGVDKIQ 96
Query: 100 QLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
L + L WHFIG LQSNK + L+A N ++D +IA RL++ PL VL
Sbjct: 97 LLANPALVWHFIGPLQSNKSR-LVA--ENFDWCHTIDRLRIAERLSQQ-RPDALAPLNVL 152
Query: 159 VQVNTSGEE 167
+Q+N S E+
Sbjct: 153 IQINISAEQ 161
>gi|373469180|ref|ZP_09560388.1| pyridoxal phosphate enzyme, YggS family [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
gi|371764859|gb|EHO53225.1| pyridoxal phosphate enzyme, YggS family [Lachnospiraceae bacterium
oral taxon 082 str. F0431]
Length = 226
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 12/135 (8%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L +V + A E+S R + ++AVSKTKP ++ + YE G R FGEN VQE+V K
Sbjct: 6 LENVENNIKLACEKSGRDMKDVTLIAVSKTKPNELVMEAYETGIRDFGENKVQELVRKCE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP---LK 156
+LP D+ WH IG+LQ+NKVK LL N ++ SVD + RL ++T RK +
Sbjct: 66 ELPKDIRWHMIGHLQTNKVKQLLG---NTVLIHSVD----SIRLADTIDTEARKKNIHVD 118
Query: 157 VLVQVNTSGE--EYG 169
L+++N + E +YG
Sbjct: 119 GLLEINVAKEASKYG 133
>gi|332667877|ref|YP_004450665.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332336691|gb|AEE53792.1| protein of unknown function UPF0001 [Haliscomenobacter hydrossis
DSM 1100]
Length = 252
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 62 RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPL 121
R+VAVSKT+P I Q+YE G R FGEN VQE+V K LP D+EWH IG+LQSNKVK +
Sbjct: 45 RLVAVSKTQPHEAIMQLYEQGQRIFGENKVQELVPKYEALPKDIEWHLIGHLQSNKVKFI 104
Query: 122 LAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
P +AM+ SVD+ K+ +++ ++ + L+Q + EE
Sbjct: 105 ---APFVAMIHSVDSLKLLAEIDKQA-AQHQRTIDCLLQFKINDEE 146
>gi|332291056|ref|YP_004429665.1| alanine racemase domain-containing protein [Krokinobacter sp.
4H-3-7-5]
gi|332169142|gb|AEE18397.1| alanine racemase domain protein [Krokinobacter sp. 4H-3-7-5]
Length = 215
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P + +VAVSKTKPVS + + YE G R FGEN +QE+ +K ++P D+EWH IG++Q+NK
Sbjct: 15 PSHVTLVAVSKTKPVSDLMEAYETGQRIFGENKIQEMTDKWEEMPKDIEWHMIGHVQTNK 74
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + P ++++ +VD K+ +N+ E R + +L+Q+ + E+
Sbjct: 75 VKFM---APYVSLIHAVDRLKLIKEVNKQAEANDR-VIDILIQIKIARED 120
>gi|307310428|ref|ZP_07590076.1| alanine racemase domain protein [Escherichia coli W]
gi|378711598|ref|YP_005276491.1| alanine racemase [Escherichia coli KO11FL]
gi|386610340|ref|YP_006125826.1| hypothetical protein ECW_m3209 [Escherichia coli W]
gi|386700095|ref|YP_006163932.1| hypothetical protein KO11_07995 [Escherichia coli KO11FL]
gi|386710848|ref|YP_006174569.1| hypothetical protein WFL_15675 [Escherichia coli W]
gi|306909323|gb|EFN39818.1| alanine racemase domain protein [Escherichia coli W]
gi|315062257|gb|ADT76584.1| hypothetical protein ECW_m3209 [Escherichia coli W]
gi|323377159|gb|ADX49427.1| alanine racemase domain protein [Escherichia coli KO11FL]
gi|383391622|gb|AFH16580.1| hypothetical protein KO11_07995 [Escherichia coli KO11FL]
gi|383406540|gb|AFH12783.1| hypothetical protein WFL_15675 [Escherichia coli W]
Length = 234
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V +++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVREKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|363755742|ref|XP_003648086.1| hypothetical protein Ecym_7450 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892122|gb|AET41269.1| hypothetical protein Ecym_7450 [Eremothecium cymbalariae
DBVPG#7215]
Length = 273
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEA-GHRCFGENYVQEIVEK 97
A ++V Q+V + R + ++AVSK KP S + +YE G R FGENYVQE++ K
Sbjct: 36 AYKAVEQQVSNSINGCGRSRADVLLLAVSKLKPASDLMILYEYEGVRNFGENYVQELIAK 95
Query: 98 AAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL--NRMVETMGRKPL 155
+ QLP D++WHF G LQ+NK K LA + NL VE++D+ K A +L +R P+
Sbjct: 96 SKQLPQDVKWHFTGTLQTNKCKD-LAKIKNLYAVETIDSVKKARKLEESRAKFYPDASPV 154
Query: 156 KVLVQVNTSGE 166
+ +Q+NTS E
Sbjct: 155 RCSIQINTSYE 165
>gi|421627336|ref|ZP_16068146.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC098]
gi|408693018|gb|EKL38630.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC098]
Length = 230
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+Q+N G+E
Sbjct: 123 CLQINIDGQE 132
>gi|169634028|ref|YP_001707764.1| hypothetical protein ABSDF2533 [Acinetobacter baumannii SDF]
gi|169152820|emb|CAP01843.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 235
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 12 ARQHVLQQIRTACELAQREPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 71
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 72 DALQDLDIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 127
Query: 158 LVQVNTSGEE 167
+QVN G+E
Sbjct: 128 CLQVNIDGQE 137
>gi|313200408|ref|YP_004039066.1| alanine racemase domain-containing protein [Methylovorus sp. MP688]
gi|312439724|gb|ADQ83830.1| alanine racemase domain protein [Methylovorus sp. MP688]
Length = 233
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 9/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V R+ Q+A + R P I ++AVSK + IR V+ AG + FGENY+QE + K +
Sbjct: 8 LQAVQARICQSATAAGRDPQEITLLAVSKAQNADAIRDVWAAGQQRFGENYLQEALNKQS 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLK 156
L D +EWHFIG +QSNK +P+ + + V VD KIA RLN R E PL+
Sbjct: 68 LLQDLPIEWHFIGPIQSNKTQPI---AQHFSWVHGVDRLKIAERLNAARPAEL---PPLQ 121
Query: 157 VLVQVNTSGEE 167
+ +QVN S EE
Sbjct: 122 ICLQVNVSHEE 132
>gi|292493756|ref|YP_003529195.1| alanine racemase domain-containing protein [Nitrosococcus
halophilus Nc4]
gi|291582351|gb|ADE16808.1| alanine racemase domain protein [Nitrosococcus halophilus Nc4]
Length = 231
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 5/132 (3%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V R+ +A +R RP + +VA +KT VS IR G R FGENY+QE +
Sbjct: 5 AQQLAQVQTRIAEAEQRFGRPAGSVTLVAATKTCSVSAIRAAIACGQRAFGENYLQEALP 64
Query: 97 KAAQL-PDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL 155
K +L ++LEWHFIG +QSNK + + A + V SVD K+A RLN+ PL
Sbjct: 65 KIKELESENLEWHFIGPIQSNKTRDIAA---HFDWVHSVDRLKVAQRLNQQ-RPPELPPL 120
Query: 156 KVLVQVNTSGEE 167
V +QVN SGE+
Sbjct: 121 NVCLQVNISGED 132
>gi|254421874|ref|ZP_05035592.1| conserved hypothetical protein TIGR00044 [Synechococcus sp. PCC
7335]
gi|196189363|gb|EDX84327.1| conserved hypothetical protein TIGR00044 [Synechococcus sp. PCC
7335]
Length = 230
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQS 115
P +RI+ V+KT ++RQ Y+AG R F EN VQE + K A+L D D+ WHFIG++QS
Sbjct: 26 PPSVRIIGVTKTFSSDIVRQAYDAGFREFAENKVQEGIAKQAKLSDLTDITWHFIGHIQS 85
Query: 116 NKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP 154
NK L V N + SVD+ K+A RLNR +++G++P
Sbjct: 86 NKA---LKVVENFDWIHSVDSLKLAARLNRQAKSLGKRP 121
>gi|153814893|ref|ZP_01967561.1| hypothetical protein RUMTOR_01108 [Ruminococcus torques ATCC 27756]
gi|317500406|ref|ZP_07958630.1| YggS family Pyridoxal phosphate enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089587|ref|ZP_08338486.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438903|ref|ZP_08618524.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847924|gb|EDK24842.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus torques ATCC
27756]
gi|316898161|gb|EFV20208.1| YggS family Pyridoxal phosphate enzyme [Lachnospiraceae bacterium
8_1_57FAA]
gi|330404955|gb|EGG84493.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017393|gb|EGN47155.1| YggS family pyridoxal phosphate enzyme [Lachnospiraceae bacterium
1_1_57FAA]
Length = 230
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 84/134 (62%), Gaps = 18/134 (13%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V +R+ A +++ R + I ++AVSKTKP ++++ Y+ G R FGEN VQEI EK
Sbjct: 6 LKTVEERIQSACKKAGRKREEITLIAVSKTKPPHMLQEAYDLGVRIFGENKVQEIREKYE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDN-------EKIAGRLNRMVETMGR 152
LP D++WH IG+LQ+NKVK + V + ++ SVD+ EK A + NR+++
Sbjct: 66 VLPKDIDWHMIGHLQTNKVKYI---VDKVKLIHSVDSFKLGEVIEKEAAKQNRIID---- 118
Query: 153 KPLKVLVQVNTSGE 166
+L++VN + E
Sbjct: 119 ----ILLEVNVAQE 128
>gi|293609002|ref|ZP_06691305.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829575|gb|EFF87937.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 230
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE +EK
Sbjct: 7 ARQHVLQQIQTACEHAQRVPETVQLLAVSKTHPSESLREMYAAGQRAFGENYLQEALEKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K + V VD IA RL+ + L +
Sbjct: 67 EALHDLDIEWHFIGHVQRNKTKHV---AEKFDWVHGVDRLIIAERLSNQ-RGDDQSALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|218550198|ref|YP_002383989.1| hypothetical protein EFER_2890 [Escherichia fergusonii ATCC 35469]
gi|218357739|emb|CAQ90383.1| putative enzyme [Escherichia fergusonii ATCC 35469]
Length = 234
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---S 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|219872205|ref|YP_002476580.1| succinyl-diaminopimelate desuccinylase [Haemophilus parasuis
SH0165]
gi|219692409|gb|ACL33632.1| succinyl-diaminopimelate desuccinylase with a TIM-barrel fold
[Haemophilus parasuis SH0165]
Length = 227
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 16/120 (13%)
Query: 54 SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEWHFIG 111
++RP ++++AVSKTKP+S I + EAG R FGENYVQE +EK D LEWHFIG
Sbjct: 21 ANRPEQSVKLLAVSKTKPISAIAEAIEAGQRAFGENYVQEGIEKIQHFAENDTLEWHFIG 80
Query: 112 NLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLVQVNTSGE 166
LQSNK + + + V+++D KIA RL+ ++P L VL+Q+N S E
Sbjct: 81 LLQSNKTRVV---AEHFDWVQTIDRLKIAQRLSE------QRPEHLPVLNVLIQINISDE 131
>gi|340352943|ref|ZP_08675776.1| proline synthetase associated protein [Prevotella pallens ATCC
700821]
gi|339611963|gb|EGQ16779.1| proline synthetase associated protein [Prevotella pallens ATCC
700821]
Length = 223
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
PD +R++A+SK P I Y G R FGE++ QE+ KA LP+D+EWHFIG+LQSNK
Sbjct: 16 PDGVRLIAISKYHPNEYIEAAYNEGQRMFGESHEQELSAKAKTLPNDIEWHFIGHLQSNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIKC 175
VK + P ++M+E+VD K+ +N+ R + VL++++ + E+ YG C
Sbjct: 76 VKYI---APYISMIEAVDTLKLLKEINKQAAKHNR-IINVLLELHIAEEDSKYGFSINDC 131
>gi|422804226|ref|ZP_16852658.1| YggS family protein pyridoxal phosphate enzyme [Escherichia
fergusonii B253]
gi|324115034|gb|EGC08999.1| YggS family protein pyridoxal phosphate enzyme [Escherichia
fergusonii B253]
Length = 234
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---S 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|432632730|ref|ZP_19868651.1| hypothetical protein A1UW_03116 [Escherichia coli KTE80]
gi|431167859|gb|ELE68113.1| hypothetical protein A1UW_03116 [Escherichia coli KTE80]
Length = 234
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I Q +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAQAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
P+ VL+Q+N S E
Sbjct: 122 PINVLIQINISDE 134
>gi|56476394|ref|YP_157983.1| hypothetical protein ebA1768 [Aromatoleum aromaticum EbN1]
gi|56312437|emb|CAI07082.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 233
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 9/116 (7%)
Query: 54 SSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQL-PDDLEWHFIGN 112
S R P+ + ++AVSKT+P + + AG R FGENYV+E V KAA+L LEWHFIG
Sbjct: 22 SGRTPEDVALIAVSKTQPAQSVAEAAHAGQRLFGENYVREGVAKAAELHARQLEWHFIGP 81
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRK--PLKVLVQVNTSGE 166
LQSNK +P+ + V SVD K+A RL+ E G + PL V +QVN GE
Sbjct: 82 LQSNKTRPV---ATHFHWVHSVDRLKLAERLS---EQRGDELPPLNVCIQVNVGGE 131
>gi|387791192|ref|YP_006256257.1| pyridoxal phosphate enzyme, YggS family [Solitalea canadensis DSM
3403]
gi|379654025|gb|AFD07081.1| pyridoxal phosphate enzyme, YggS family [Solitalea canadensis DSM
3403]
Length = 231
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 72/108 (66%), Gaps = 4/108 (3%)
Query: 60 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVK 119
+++++AVSKT+PV I++ Y+AG R FGEN VQE+V+K LP D+EWH IG+LQ+NKVK
Sbjct: 18 KVKLIAVSKTQPVEKIQEAYDAGQRIFGENQVQEMVDKYEHLPKDIEWHLIGHLQTNKVK 77
Query: 120 PLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+ P + ++ SVD+ K+ +N+ R + L+QV + EE
Sbjct: 78 YI---APFVNLIHSVDSLKLLQEINKQALKNNR-VIDCLLQVYIADEE 121
>gi|365960582|ref|YP_004942149.1| alanine racemase [Flavobacterium columnare ATCC 49512]
gi|365737263|gb|AEW86356.1| alanine racemase [Flavobacterium columnare ATCC 49512]
Length = 220
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 53 RSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGN 112
+SS PP + +VAVSKTKPVS + + Y+ G R FGEN +QE+ EK Q+P D++WH IG+
Sbjct: 11 KSSLPP-HVTLVAVSKTKPVSDLMEAYQTGQRIFGENKIQEMTEKWEQMPKDIQWHMIGH 69
Query: 113 LQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
+Q+NKVK + P ++++ VD+ K+ +N+ + R + L+Q+ + EE
Sbjct: 70 VQTNKVKYM---APFVSLIHGVDSLKLLQEINKQAQKNNR-VIDCLLQIYIAEEE 120
>gi|333030146|ref|ZP_08458207.1| protein of unknown function UPF0001 [Bacteroides coprosuis DSM
18011]
gi|332740743|gb|EGJ71225.1| protein of unknown function UPF0001 [Bacteroides coprosuis DSM
18011]
Length = 223
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 78/121 (64%), Gaps = 7/121 (5%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-DDLEWHFIGNLQSN 116
P+ +R+VAVSK V IR+ Y AG R FGE+ QE++ K +LP +D++WHFIG+LQSN
Sbjct: 15 PEEVRLVAVSKYHSVDDIREAYNAGQRIFGESKAQELIAKHEELPQEDIQWHFIGHLQSN 74
Query: 117 KVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE--YGECFIK 174
K+K + P ++++ SVD ++ +N+ + GR + L+Q++ + E+ YG F +
Sbjct: 75 KIKYI---APFISLIHSVDTFRLLKNINKEAKKEGR-IIPCLLQLHIADEDTKYGFSFTE 130
Query: 175 C 175
C
Sbjct: 131 C 131
>gi|358063938|ref|ZP_09150535.1| YggS family pyridoxal phosphate enzyme [Clostridium hathewayi
WAL-18680]
gi|356697886|gb|EHI59449.1| YggS family pyridoxal phosphate enzyme [Clostridium hathewayi
WAL-18680]
Length = 231
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 83/130 (63%), Gaps = 8/130 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
+ V +++ +A R SR P+ + ++AVSKTKPV ++ + YEAG R FGEN VQE+V+K
Sbjct: 6 MTYVQEKIREACGRVSRNPEEVTLIAVSKTKPVEMLLEAYEAGARDFGENKVQELVQKRP 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV-- 157
LP+D +H IG+LQ+NKVK ++ A++ SVD+ +A ++ R+ L V
Sbjct: 66 LLPEDARFHMIGHLQTNKVKQVIG---QTALIHSVDSIHLAEQIE---AEAARRDLTVDI 119
Query: 158 LVQVNTSGEE 167
L++VN + EE
Sbjct: 120 LLEVNVAKEE 129
>gi|260912321|ref|ZP_05918872.1| K+ uptake protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260633622|gb|EEX51761.1| K+ uptake protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 224
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 12/141 (8%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
AT + ++RV Q S PP+ +++VAVSK P + YE G R FGE++ QE+
Sbjct: 2 ATDVAGNLKRVVQ-----SLPPN-VKLVAVSKFHPNEELMAAYEQGQRIFGESHEQELSR 55
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK 156
KAA+LP D+ WHFIG+LQSNKVK + P + M+E+VD+ K+ +N+ E GR +
Sbjct: 56 KAAELPKDIAWHFIGHLQSNKVKYI---APYIDMIEAVDSLKLLREINKQAERCGR-VID 111
Query: 157 VLVQVNTSGE--EYGECFIKC 175
VL++++ + E ++G C
Sbjct: 112 VLLELHVAQEASKFGFTLDAC 132
>gi|291563462|emb|CBL42278.1| pyridoxal phosphate enzyme, YggS family [butyrate-producing
bacterium SS3/4]
Length = 227
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A +++V +R++ A R+ R P + +++VSKTKPVS++ + YEAG R +GEN VQEI E
Sbjct: 4 AENIKNVRERMNAACLRAGRDPKEVTLISVSKTKPVSMLMEAYEAGERDYGENKVQEITE 63
Query: 97 KAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPL- 155
K Q+P+D ++H IG+LQ+NKV ++ V ++ S D+ +A ++ + E R +
Sbjct: 64 KRPQIPEDAKFHMIGHLQTNKVGQVIDKV---VLIHSCDSVHLAEKIEK--EAAKRDMIA 118
Query: 156 KVLVQVNTSGEE 167
VL++VN + EE
Sbjct: 119 NVLLEVNVAREE 130
>gi|253998334|ref|YP_003050397.1| alanine racemase domain-containing protein [Methylovorus
glucosetrophus SIP3-4]
gi|253985013|gb|ACT49870.1| alanine racemase domain protein [Methylovorus glucosetrophus
SIP3-4]
Length = 233
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L++V R+ Q+A + R P I ++AVSK + IR + AG + FGENY+QE + K A
Sbjct: 8 LQAVQARICQSATAAGRDPQEITLLAVSKAQNADAIRDAWAAGQQRFGENYLQEALNKQA 67
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLK 156
L D +EWHFIG +QSNK +P+ + + V VD KIA RLN R E PL+
Sbjct: 68 LLQDLPIEWHFIGPIQSNKTQPI---AQHFSWVHGVDRLKIAERLNAARPAEL---PPLQ 121
Query: 157 VLVQVNTSGEE 167
+ +QVN S EE
Sbjct: 122 ICLQVNVSHEE 132
>gi|295662246|ref|XP_002791677.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279803|gb|EEH35369.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 303
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 79/136 (58%), Gaps = 20/136 (14%)
Query: 49 QAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRC-FGENYVQEIVEKAAQLPDDLEW 107
Q+ ++ RP +R+VAVSK KP S I+ ++ R FGENY+QE++EK+ LP + W
Sbjct: 53 QSRPQTQRP---VRLVAVSKLKPASDIQILHNHDPRLHFGENYLQELLEKSKVLPCGIRW 109
Query: 108 HFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNR--------MVETMGRKP----- 154
HFIG LQSNK L V L VESVD EK A L+R + E G+K
Sbjct: 110 HFIGGLQSNKCVTLARDVRGLWAVESVDTEKKASLLDRGWGERDVDVNEEGGKKGQSINA 169
Query: 155 ---LKVLVQVNTSGEE 167
L+V VQVNTSGEE
Sbjct: 170 GDRLRVFVQVNTSGEE 185
>gi|47207637|emb|CAF90890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 276
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 38/165 (23%)
Query: 39 ALRSVIQRVHQAAER---------SSRPPDRIRIVAVS------------------KTKP 71
AL+SV++R++QAA R S P R+ I A + + P
Sbjct: 13 ALQSVMERINQAAARRPKVGGLPEPSAPQPRVVIGAAAAPSLTLCPPCCRASLPSARPNP 72
Query: 72 VSVIRQVYEAGHRCFGENYVQEIVEKAAQLP------DDLEWHFIGNLQSNKVKPLLAGV 125
+++ + Y G R FGENYV E+++KA+ P +++WHFIG+LQ N V LL GV
Sbjct: 73 QNLVVEAYRRGQRSFGENYVNELLDKASD-PLILGSCPEIQWHFIGHLQKNNVNKLL-GV 130
Query: 126 PNLAMVESVDNEKIAGRLNRMVETM-GRKP--LKVLVQVNTSGEE 167
PNL +VE+VD+ K+A ++N + + G P LKV+VQVNTSGE+
Sbjct: 131 PNLHLVETVDSVKLADKVNSSWQRIRGASPQRLKVMVQVNTSGEQ 175
>gi|296818063|ref|XP_002849368.1| alanine racemase family protein [Arthroderma otae CBS 113480]
gi|238839821|gb|EEQ29483.1| alanine racemase family protein [Arthroderma otae CBS 113480]
Length = 280
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 73/126 (57%), Gaps = 19/126 (15%)
Query: 61 IRIVAVSKTKPVSVIRQVYE--AGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKV 118
+R+VAVSK KP S I ++ H FGENYVQE++EK+ LP ++ WHFIG LQSNK
Sbjct: 51 VRLVAVSKLKPASDILALHSPPTSHLHFGENYVQELLEKSKVLPPEIRWHFIGGLQSNKC 110
Query: 119 KPLLAGVPNLAMVESVDNEKIAGRLNR------------MVETMGR-----KPLKVLVQV 161
L V L VESVD EK A L++ V+T G + L+V VQV
Sbjct: 111 VMLAREVRGLWAVESVDTEKKASLLDKGWGERPEFKDKGTVDTDGTSEQEDRRLRVFVQV 170
Query: 162 NTSGEE 167
NTSGEE
Sbjct: 171 NTSGEE 176
>gi|90415261|ref|ZP_01223195.1| hypothetical protein GB2207_08096 [gamma proteobacterium HTCC2207]
gi|90332584|gb|EAS47754.1| hypothetical protein GB2207_08096 [marine gamma proteobacterium
HTCC2207]
Length = 257
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V +R+ Q+A R P+ I ++AVSKT+ IRQ +AG F ENY+QE +EK A+L
Sbjct: 37 VSKRIDQSAAECGRDPNDILLLAVSKTRSAEYIRQAMDAGLSHFAENYLQEALEKIAELE 96
Query: 103 -DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL-NRMVETMGRKPLKVLVQ 160
++L WHFIG LQSNK + N + V SVD KIA RL ++ E++G PL + +Q
Sbjct: 97 GENLCWHFIGPLQSNKTR---NAAENFSWVHSVDRLKIAQRLSDQRPESLG--PLNICLQ 151
Query: 161 VNTSGEEYGECFI 173
VN E F+
Sbjct: 152 VNIDNEPSKSGFL 164
>gi|421661478|ref|ZP_16101654.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC110]
gi|408715890|gb|EKL61012.1| pyridoxal phosphate enzyme, YggS family [Acinetobacter baumannii
OIFC110]
Length = 230
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 39 ALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA 98
A + V+Q++ A E + R P+ ++++AVSKT P +R++Y AG R FGENY+QE ++K
Sbjct: 7 ARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQEALDKI 66
Query: 99 AQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKV 157
L D D+EWHFIG++Q NK K L V VD IA RL+ + L +
Sbjct: 67 DALQDLDIEWHFIGHVQRNKTKHL---AEQFDWVHGVDRLIIAERLSNQ-RGDDQAALNI 122
Query: 158 LVQVNTSGEE 167
+QVN G++
Sbjct: 123 CLQVNIDGQD 132
>gi|332878474|ref|ZP_08446195.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|357044519|ref|ZP_09106169.1| pyridoxal phosphate enzyme, YggS family [Paraprevotella clara YIT
11840]
gi|332683569|gb|EGJ56445.1| pyridoxal phosphate enzyme, YggS family [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|355532572|gb|EHH01955.1| pyridoxal phosphate enzyme, YggS family [Paraprevotella clara YIT
11840]
Length = 223
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 58 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNK 117
P +R+VAVSK P S I + Y AG R FGE++VQE+ K LP D+EWHFIG+LQ+NK
Sbjct: 16 PCGVRLVAVSKYHPESHIEEAYAAGQRVFGESHVQELRRKYDNLPKDIEWHFIGHLQTNK 75
Query: 118 VKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEE 167
VK + P +AM+ +VD+ K+ +++ E GR + L+Q++ + EE
Sbjct: 76 VKYI---APYVAMIHAVDSMKLLLEIDKQGEKSGR-VIPCLLQLHVAKEE 121
>gi|332022075|gb|EGI62400.1| Proline synthetase co-transcribed bacterial-like protein protein
[Acromyrmex echinatior]
Length = 252
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 10/141 (7%)
Query: 36 AATALRSVIQRVHQAAERSSRPPDRI--RIVAVSKTKPVSVIRQVYEAGHRCFGENYVQE 93
A L+SV ++ AA + + R+VAVSK + I YEAG R FGENY+ E
Sbjct: 4 VAANLKSVCDKISYAATKRTSEYQYYEPRLVAVSKLQSTVSIVSAYEAGQRNFGENYINE 63
Query: 94 IVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVE 148
+VEKA + ++WHFIG+LQ NKV +L+ +PNL ++E+VD++++A LN
Sbjct: 64 LVEKAFSPLIREKCKQIQWHFIGHLQRNKVNKVLS-IPNLYIIETVDSDRLANALNNSWP 122
Query: 149 TMGRK--PLKVLVQVNTSGEE 167
+ L V+VQVNTS E+
Sbjct: 123 RFRKNNDKLNVMVQVNTSQEK 143
>gi|398867823|ref|ZP_10623267.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM78]
gi|398235774|gb|EJN21583.1| pyridoxal phosphate enzyme, YggS family [Pseudomonas sp. GM78]
Length = 228
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Query: 43 VIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP 102
V R+ AA + R + ++++AVSKTKP +R+ Y AG R FGENY+QE + K +L
Sbjct: 11 VGSRIRAAALAAHRDENSVQLLAVSKTKPAQALREAYAAGLRDFGENYLQEALGKQLELS 70
Query: 103 D-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLV 159
D L WHFIG +QSNK + A + A V SVD KIA RL+ R E PL + +
Sbjct: 71 DLPLIWHFIGPIQSNKTR---AIAEHFAWVHSVDRLKIAQRLSEQRPAEM---PPLNICI 124
Query: 160 QVNTSGE 166
QVN SGE
Sbjct: 125 QVNVSGE 131
>gi|366159936|ref|ZP_09459798.1| hypothetical protein ETW09_13420 [Escherichia sp. TW09308]
Length = 234
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISTAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|410418036|ref|YP_006898485.1| hypothetical protein BN115_0224 [Bordetella bronchiseptica MO149]
gi|427817526|ref|ZP_18984589.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427823268|ref|ZP_18990330.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|408445331|emb|CCJ56980.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410568526|emb|CCN16568.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410588533|emb|CCN03592.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 250
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 7/133 (5%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L ++ R+ A ER +RPP+ + ++ VSKT PV IR G R FGEN QEI KA
Sbjct: 24 LAAIQARIKAACERGARPPESVALLPVSKTFPVEAIRHAAALGLRRFGENKTQEIRHKAP 83
Query: 100 QLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVL 158
+L D DL+W IG+LQ+NK K + ++A V+S+D ++A L R +E R L VL
Sbjct: 84 ELADLDLQWVMIGHLQTNKAKDV---ARDVAEVQSLDRLELADALQRRLEMEARS-LDVL 139
Query: 159 VQVNTSGE--EYG 169
VQV TS E +YG
Sbjct: 140 VQVKTSPEPSKYG 152
>gi|374703219|ref|ZP_09710089.1| alanine racemase domain-containing protein [Pseudomonas sp. S9]
Length = 235
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 15/127 (11%)
Query: 46 RVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-D 104
R+ +AA+ +R P+ I ++AVSKTKP S +RQ Y AG FGENY+QE ++K +L D
Sbjct: 14 RIREAAQACARQPETIGLLAVSKTKPASAVRQAYAAGVHDFGENYLQEALDKQHELSDLP 73
Query: 105 LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKP-----LKVLV 159
L WHFIG +QSNK + + N V SVD K+A RL+ ++P L + +
Sbjct: 74 LIWHFIGPIQSNKTRAI---AENFDWVHSVDRLKVAQRLS------AQRPAHLPALNICL 124
Query: 160 QVNTSGE 166
QVN S E
Sbjct: 125 QVNVSQE 131
>gi|359429110|ref|ZP_09220138.1| hypothetical protein ACT4_021_02930 [Acinetobacter sp. NBRC 100985]
gi|358235691|dbj|GAB01677.1| hypothetical protein ACT4_021_02930 [Acinetobacter sp. NBRC 100985]
Length = 225
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 41 RSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQ 100
+SV+ ++ QA +++ R P ++++AVSKT P +R++Y G R FGENY+QE + K +
Sbjct: 9 QSVLSQIEQACQQAQRDPATVQLLAVSKTHPSLALREMYAVGQRSFGENYLQEALTKIEE 68
Query: 101 LPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLV 159
L D ++EWHFIG++Q NK K L V VD IA RL+ + PL + +
Sbjct: 69 LQDLEIEWHFIGHVQRNKTKHL---AEKFDWVHGVDRLIIAERLSSQ-RLESQTPLNICL 124
Query: 160 QVNTSGEE 167
QVN G++
Sbjct: 125 QVNIDGQD 132
>gi|293449281|ref|ZP_06663702.1| YggS family pyridoxal phosphate enzyme [Escherichia coli B088]
gi|291322371|gb|EFE61800.1| YggS family pyridoxal phosphate enzyme [Escherichia coli B088]
Length = 234
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
Query: 37 ATALRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVE 96
A L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+
Sbjct: 5 ALNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVD 64
Query: 97 KAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETM 150
K + LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 65 KIRHFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNDQRPAEL- 120
Query: 151 GRKPLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 121 --PPLNVLIQINISDE 134
>gi|24114206|ref|NP_708716.1| hypothetical protein SF2941 [Shigella flexneri 2a str. 301]
gi|30064267|ref|NP_838438.1| hypothetical protein S3145 [Shigella flexneri 2a str. 2457T]
gi|384544502|ref|YP_005728565.1| putative enzyme with a TIM-barrel fold [Shigella flexneri 2002017]
gi|415857948|ref|ZP_11532560.1| pyridoxal phosphate enzyme, YggS family [Shigella flexneri 2a str.
2457T]
gi|417724520|ref|ZP_12373318.1| hypothetical protein SFK304_3756 [Shigella flexneri K-304]
gi|417729842|ref|ZP_12378535.1| hypothetical protein SFK671_3525 [Shigella flexneri K-671]
gi|417734816|ref|ZP_12383463.1| hypothetical protein SF274771_3537 [Shigella flexneri 2747-71]
gi|417744790|ref|ZP_12393313.1| alanine racemase, N-terminal domain protein [Shigella flexneri
2930-71]
gi|420343298|ref|ZP_14844764.1| hypothetical protein SFK404_3905 [Shigella flexneri K-404]
gi|24053353|gb|AAN44423.1| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30042524|gb|AAP18248.1| hypothetical protein S3145 [Shigella flexneri 2a str. 2457T]
gi|281602287|gb|ADA75271.1| putative enzyme with a TIM-barrel fold [Shigella flexneri 2002017]
gi|313648001|gb|EFS12447.1| pyridoxal phosphate enzyme, YggS family [Shigella flexneri 2a str.
2457T]
gi|332753795|gb|EGJ84174.1| hypothetical protein SFK671_3525 [Shigella flexneri K-671]
gi|332754247|gb|EGJ84613.1| hypothetical protein SF274771_3537 [Shigella flexneri 2747-71]
gi|332765368|gb|EGJ95586.1| alanine racemase, N-terminal domain protein [Shigella flexneri
2930-71]
gi|333015075|gb|EGK34418.1| hypothetical protein SFK304_3756 [Shigella flexneri K-304]
gi|391264131|gb|EIQ23127.1| hypothetical protein SFK404_3905 [Shigella flexneri K-404]
Length = 234
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K
Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIR 67
Query: 100 QLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRK 153
+ LEWHFIG LQSNK + L+A + ++D +IA RLN R E
Sbjct: 68 HFQELGVTGLEWHFIGPLQSNKSR-LVA--EHFDWCHTIDRLRIATRLNEQRPAEL---P 121
Query: 154 PLKVLVQVNTSGE 166
PL VL+Q+N S E
Sbjct: 122 PLNVLIQINISDE 134
>gi|197301725|ref|ZP_03166795.1| hypothetical protein RUMLAC_00451 [Ruminococcus lactaris ATCC
29176]
gi|197299165|gb|EDY33695.1| pyridoxal phosphate enzyme, YggS family [Ruminococcus lactaris ATCC
29176]
Length = 230
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 16/134 (11%)
Query: 40 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA 99
L+ V +R+ A +R+ R + + ++AVSKTKPV +++ Y+ G R FGEN VQE+ K
Sbjct: 6 LQEVEKRIQAACDRAGRKREEVTLIAVSKTKPVETLQEAYDLGVRIFGENKVQELTAKYE 65
Query: 100 QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLK--- 156
LP D+ WH IG+LQ+NKVK + + ++ SVD+ K+A ET+ ++ K
Sbjct: 66 ALPKDIHWHMIGHLQTNKVKYI---IDKAELIHSVDSLKLA-------ETIEKEAAKHDL 115
Query: 157 ---VLVQVNTSGEE 167
+LV+VN + EE
Sbjct: 116 IADILVEVNVAEEE 129
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,609,681,694
Number of Sequences: 23463169
Number of extensions: 90652680
Number of successful extensions: 355699
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3470
Number of HSP's successfully gapped in prelim test: 600
Number of HSP's that attempted gapping in prelim test: 346792
Number of HSP's gapped (non-prelim): 4140
length of query: 185
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 51
effective length of database: 9,215,130,721
effective search space: 469971666771
effective search space used: 469971666771
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)