Query 029919
Match_columns 185
No_of_seqs 201 out of 1321
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:49:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029919.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029919hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3w_A Phosphoglucosamine muta 99.9 1.1E-23 3.7E-28 191.0 10.6 96 72-184 2-98 (443)
2 3pdk_A Phosphoglucosamine muta 99.9 1.7E-23 5.8E-28 191.2 10.5 96 72-184 23-118 (469)
3 1p5d_X PMM, phosphomannomutase 99.9 6.1E-23 2.1E-27 186.3 11.6 95 72-184 11-105 (463)
4 2f7l_A 455AA long hypothetical 99.9 3.2E-23 1.1E-27 187.7 9.3 93 72-184 2-94 (455)
5 3uw2_A Phosphoglucomutase/phos 99.9 8.3E-23 2.8E-27 187.6 12.0 96 71-184 24-127 (485)
6 1wqa_A Phospho-sugar mutase; a 99.9 1.1E-22 3.7E-27 184.3 11.9 96 73-184 3-98 (455)
7 1tuo_A Putative phosphomannomu 99.9 1E-21 3.5E-26 178.7 11.0 94 73-184 12-106 (464)
8 4hjh_A Phosphomannomutase; str 99.8 2.7E-21 9.2E-26 176.6 8.9 97 72-184 9-105 (481)
9 2z0f_A Putative phosphoglucomu 99.8 1.8E-20 6.1E-25 172.4 7.9 97 72-184 23-127 (524)
10 3na5_A Phosphoglucomutase; iso 99.8 3.5E-20 1.2E-24 173.1 9.3 97 72-184 63-167 (570)
11 1kfi_A Phosphoglucomutase 1; p 99.8 1.4E-19 4.8E-24 168.5 6.8 97 72-184 18-123 (572)
12 3pmg_A Alpha-D-glucose-1,6-bis 99.7 5E-19 1.7E-23 164.9 4.2 97 73-184 14-113 (561)
13 2dka_A Phosphoacetylglucosamin 98.8 1.2E-08 4.2E-13 94.4 9.5 93 71-172 20-180 (544)
14 1o1x_A Ribose-5-phosphate isom 90.8 0.7 2.4E-05 36.6 7.0 57 126-184 13-76 (155)
15 2vvr_A Ribose-5-phosphate isom 89.7 0.65 2.2E-05 36.5 5.9 56 127-184 3-65 (149)
16 2vvp_A Ribose-5-phosphate isom 87.3 0.78 2.7E-05 36.5 4.9 57 126-184 4-68 (162)
17 3he8_A Ribose-5-phosphate isom 86.7 1.7 5.9E-05 34.1 6.5 56 127-184 2-64 (149)
18 3ph3_A Ribose-5-phosphate isom 86.0 1.9 6.4E-05 34.6 6.5 58 125-184 20-84 (169)
19 4em8_A Ribose 5-phosphate isom 84.8 3.3 0.00011 32.5 7.2 57 126-184 8-70 (148)
20 3s5p_A Ribose 5-phosphate isom 80.7 2.6 8.8E-05 33.7 5.3 58 125-184 21-85 (166)
21 4dik_A Flavoprotein; TM0755, e 78.1 6.3 0.00021 34.8 7.5 68 78-158 231-299 (410)
22 2ehp_A AQ_1627 protein; putati 76.7 9.5 0.00032 28.6 7.0 55 94-159 19-73 (126)
23 2ppw_A Conserved domain protei 76.1 3.6 0.00012 34.1 5.0 37 126-163 4-43 (216)
24 3k7p_A Ribose 5-phosphate isom 75.3 4.2 0.00014 32.8 5.1 57 126-184 23-88 (179)
25 3sgw_A Ribose 5-phosphate isom 68.6 8.1 0.00028 31.3 5.3 57 126-184 30-96 (184)
26 3fni_A Putative diflavin flavo 67.4 8.4 0.00029 29.1 5.0 39 125-163 4-43 (159)
27 3ono_A Ribose/galactose isomer 67.2 5.9 0.0002 32.8 4.3 57 125-184 3-73 (214)
28 3hly_A Flavodoxin-like domain; 42.0 45 0.0015 24.8 5.3 34 127-160 2-36 (161)
29 2vqe_K 30S ribosomal protein S 38.7 1.2E+02 0.0042 22.7 7.7 60 94-165 55-115 (129)
30 3l21_A DHDPS, dihydrodipicolin 36.4 1.7E+02 0.0057 24.4 8.5 86 61-159 31-116 (304)
31 3ezx_A MMCP 1, monomethylamine 35.5 61 0.0021 25.8 5.4 44 125-171 92-139 (215)
32 3na8_A Putative dihydrodipicol 34.1 1.6E+02 0.0056 24.6 8.1 87 60-159 39-125 (315)
33 3c5y_A Ribose/galactose isomer 33.2 14 0.00047 31.0 1.1 57 128-184 24-90 (231)
34 3a5f_A Dihydrodipicolinate syn 33.1 2E+02 0.007 23.6 8.5 86 60-159 17-102 (291)
35 3j20_M 30S ribosomal protein S 32.9 69 0.0024 24.5 5.0 64 93-165 53-122 (137)
36 3u5c_O RP59A, 40S ribosomal pr 32.2 66 0.0023 24.6 4.8 64 94-165 54-122 (137)
37 3tnj_A Universal stress protei 31.7 68 0.0023 22.4 4.6 40 126-165 7-46 (150)
38 3f6r_A Flavodoxin; FMN binding 31.5 69 0.0024 22.8 4.7 35 127-161 3-38 (148)
39 1e5d_A Rubredoxin\:oxygen oxid 30.7 1.6E+02 0.0055 24.4 7.5 55 98-161 234-289 (402)
40 1ccw_A Protein (glutamate muta 30.6 32 0.0011 25.4 2.7 43 126-171 4-50 (137)
41 1y80_A Predicted cobalamin bin 30.4 93 0.0032 24.1 5.6 44 125-171 88-135 (210)
42 5nul_A Flavodoxin; electron tr 29.9 41 0.0014 23.8 3.2 29 129-157 2-31 (138)
43 1q77_A Hypothetical protein AQ 29.1 69 0.0024 22.1 4.2 39 126-164 5-44 (138)
44 2i2x_B MTAC, methyltransferase 28.5 70 0.0024 26.0 4.7 72 94-171 92-170 (258)
45 3qze_A DHDPS, dihydrodipicolin 28.5 2.5E+02 0.0085 23.5 8.3 87 60-159 38-124 (314)
46 2hna_A Protein MIOC, flavodoxi 28.1 92 0.0031 22.3 4.9 34 127-160 3-37 (147)
47 2yxb_A Coenzyme B12-dependent 27.5 45 0.0015 25.3 3.2 44 125-171 18-65 (161)
48 1jmv_A USPA, universal stress 27.4 91 0.0031 21.5 4.6 37 126-162 3-39 (141)
49 3si9_A DHDPS, dihydrodipicolin 27.3 2.8E+02 0.0094 23.3 8.5 87 60-159 37-123 (315)
50 3ckm_A YRAM (HI1655), LPOA; pe 27.0 75 0.0026 25.7 4.6 53 95-159 106-158 (327)
51 3m5v_A DHDPS, dihydrodipicolin 26.6 2.7E+02 0.0093 23.0 9.1 86 62-159 24-109 (301)
52 3hgm_A Universal stress protei 26.6 50 0.0017 22.9 3.1 41 126-166 3-43 (147)
53 4eyg_A Twin-arginine transloca 26.3 1.6E+02 0.0053 23.6 6.4 49 101-158 124-172 (368)
54 3e96_A Dihydrodipicolinate syn 26.0 2.7E+02 0.0093 23.2 8.1 85 61-159 28-112 (316)
55 3tak_A DHDPS, dihydrodipicolin 25.9 2.7E+02 0.0094 22.8 8.1 87 60-159 16-102 (291)
56 3flu_A DHDPS, dihydrodipicolin 25.8 2.8E+02 0.0096 22.8 8.9 87 60-159 22-108 (297)
57 3d0c_A Dihydrodipicolinate syn 25.6 2.6E+02 0.0088 23.4 7.9 86 60-159 27-112 (314)
58 4edg_A DNA primase; catalytic 25.4 1.6E+02 0.0054 25.2 6.6 71 64-159 158-229 (329)
59 3i09_A Periplasmic branched-ch 25.2 1.6E+02 0.0056 23.7 6.4 48 102-158 126-173 (375)
60 3r8n_K 30S ribosomal protein S 25.0 2E+02 0.007 21.1 6.3 60 94-165 45-105 (117)
61 3snr_A Extracellular ligand-bi 24.9 1.7E+02 0.006 23.0 6.4 49 101-158 120-168 (362)
62 2ohh_A Type A flavoprotein FPR 24.5 1.6E+02 0.0056 24.3 6.4 54 100-162 240-294 (404)
63 2wkj_A N-acetylneuraminate lya 24.4 3E+02 0.01 22.7 8.6 87 60-159 26-112 (303)
64 4evq_A Putative ABC transporte 24.0 1.8E+02 0.0062 23.2 6.4 48 102-158 137-184 (375)
65 3s5o_A 4-hydroxy-2-oxoglutarat 23.9 3.1E+02 0.011 22.7 9.2 86 61-159 30-115 (307)
66 1ycg_A Nitric oxide reductase; 23.5 1.7E+02 0.0058 24.2 6.3 53 100-161 235-288 (398)
67 3s3t_A Nucleotide-binding prot 23.3 52 0.0018 22.9 2.6 39 126-164 6-44 (146)
68 3n0w_A ABC branched chain amin 22.2 1.6E+02 0.0055 23.8 5.8 48 102-158 128-175 (379)
69 2v9d_A YAGE; dihydrodipicolini 22.2 3.4E+02 0.012 23.0 8.1 87 60-159 46-132 (343)
70 3fdx_A Putative filament prote 22.0 75 0.0026 21.9 3.3 40 126-165 2-43 (143)
71 1bvy_F Protein (cytochrome P45 21.9 84 0.0029 24.4 3.8 32 126-157 22-54 (191)
72 4f06_A Extracellular ligand-bi 21.8 2E+02 0.007 23.4 6.4 48 103-159 126-173 (371)
73 4gi5_A Quinone reductase; prot 21.7 83 0.0028 26.3 4.0 32 128-159 27-59 (280)
74 4dpp_A DHDPS 2, dihydrodipicol 21.3 3.9E+02 0.013 23.1 8.4 87 60-159 74-160 (360)
75 2a5l_A Trp repressor binding p 21.2 2.1E+02 0.0072 21.0 5.9 34 127-160 7-41 (200)
76 3qfe_A Putative dihydrodipicol 21.1 3.5E+02 0.012 22.6 7.8 86 61-159 27-112 (318)
77 2r8w_A AGR_C_1641P; APC7498, d 21.0 3.1E+02 0.011 23.1 7.6 87 60-159 49-135 (332)
78 2zki_A 199AA long hypothetical 20.6 1.2E+02 0.004 22.6 4.3 33 127-159 6-38 (199)
79 3dz1_A Dihydrodipicolinate syn 20.3 3.6E+02 0.012 22.4 7.7 85 61-159 24-108 (313)
No 1
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=99.89 E-value=1.1e-23 Score=190.98 Aligned_cols=96 Identities=24% Similarity=0.334 Sum_probs=88.0
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCC-eEEEEecCCCChHHHHHHHHHHHH
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDV-KVSLGKDPRVSGPSLSVAVFAGLA 150 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~-~VvVGrD~R~SS~~la~ava~gL~ 150 (185)
+++|+++||||++++| +||++++.++|+|||+|+.+. + .. +|+||||+|.+|++|++++++||+
T Consensus 2 ~~~FGt~GiRG~~~~g------~lt~~~v~~~g~a~~~~l~~~-----~----~~~~VvVG~D~R~ss~~l~~a~~~gl~ 66 (443)
T 3i3w_A 2 AKYFGTDGIRGEVANS------TITVEFTQKLGNAVGSLINQK-----N----YPKFVIVGQDTRSSGGFLKFALVSGLN 66 (443)
T ss_dssp -CCCCSSSSEEEBSSS------SBSHHHHHHHHHHHHHHHHHT-----T----CCSEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred CcccCCCCeeEEeCCC------CCCHHHHHHHHHHHHHHHHhc-----C----CCCeEEEEeCCCcCHHHHHHHHHHHHH
Confidence 5799999999999842 799999999999999999764 1 24 799999999999999999999999
Q ss_pred hCCCeEEEeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 151 RAGCLVFDMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 151 s~Gi~V~d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
++|++|+++|++|||+++|++ +++++++||||
T Consensus 67 s~G~~V~~~g~~pTP~~~~av--~~~~a~~GImI 98 (443)
T 3i3w_A 67 AAGIDVLDLGVVPTPVVAFMT--VKHRAAAGFVI 98 (443)
T ss_dssp HHTCEEEEEEECCHHHHHHHH--HHTTCSEEEEE
T ss_pred HCCCeEEEeCCCCHHHHHHHH--HhcCCCeEEEE
Confidence 999999999999999999999 57899999998
No 2
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=99.89 E-value=1.7e-23 Score=191.20 Aligned_cols=96 Identities=31% Similarity=0.406 Sum_probs=88.7
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHh
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s 151 (185)
+++|+++||||+++ ++||++++.++|+|||+|+.+.. ...+|+||||+|.+|++|++++++||++
T Consensus 23 ~~~FGt~GiRG~~~-------~~lt~~~v~~~g~a~~~~l~~~~--------~~~~VvIG~D~R~ss~~~~~a~a~gl~s 87 (469)
T 3pdk_A 23 GKYFGTDGVRGVAN-------KELTPELAFKIGRFGGYVLTKDT--------DRPKVIIGRDTRISGHMLEGALVAGLLS 87 (469)
T ss_dssp CCSCBTTBEEEEBT-------TTBCHHHHHHHHHHHHHHHHTTC--------SSCEEEEEECSCTTHHHHHHHHHHHHHT
T ss_pred ccccCCCCeeeecC-------CCCCHHHHHHHHHHHHHHHHhhC--------CCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 57999999999998 48999999999999999997631 2368999999999999999999999999
Q ss_pred CCCeEEEeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 152 ~Gi~V~d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
+|++|+++|++|||+++|++ +++++++||||
T Consensus 88 ~Gi~V~~~g~~pTP~l~fav--~~~~a~~GImI 118 (469)
T 3pdk_A 88 TGAEVMRLGVISTPGVAYLT--KALDAQAGVMI 118 (469)
T ss_dssp TTCEEEEEEECCHHHHHHHH--HHHTCSEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHH--HhcCCCeEEEE
Confidence 99999999999999999999 57899999998
No 3
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=99.88 E-value=6.1e-23 Score=186.27 Aligned_cols=95 Identities=28% Similarity=0.475 Sum_probs=88.4
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHh
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s 151 (185)
+++|+++||||+++ .+||++++.++++|||+|+.+. + ..+|+||||+|.+|++|+++++++|++
T Consensus 11 ~~~Fgt~GiRG~~~-------~~~t~~~~~~i~~a~~~~l~~~-----~----~~~VvVG~D~R~ss~~l~~a~~~gl~a 74 (463)
T 1p5d_X 11 ASIFRAYDIRGVVG-------DTLTAETAYWIGRAIGSESLAR-----G----EPCVAVGRDGRLSGPELVKQLIQGLVD 74 (463)
T ss_dssp GGGBCSSSEEEEBT-------TTBCHHHHHHHHHHHHHHHHHT-----T----CCEEEEEECSCTTHHHHHHHHHHHHHT
T ss_pred ccccCCCCcceeCC-------CCCCHHHHHHHHHHHHHHHHHc-----C----CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57999999999998 4899999999999999999764 1 257999999999999999999999999
Q ss_pred CCCeEEEeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 152 ~Gi~V~d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
+|++|+++|++|||+++|++ +++++++||||
T Consensus 75 ~G~~V~~~g~~pTP~l~~av--~~~~~~~GImI 105 (463)
T 1p5d_X 75 CGCQVSDVGMVPTPVLYYAA--NVLEGKSGVML 105 (463)
T ss_dssp BTCEEEEEEECCHHHHHHHH--HHSSCSEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHH--HhcCCCeEEEE
Confidence 99999999999999999999 57899999998
No 4
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=99.88 E-value=3.2e-23 Score=187.72 Aligned_cols=93 Identities=30% Similarity=0.487 Sum_probs=87.0
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHh
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s 151 (185)
+++|+++||||+++ .+||++++.++++||++|+.++ .+|+||||+|.+|++|+++++++|++
T Consensus 2 ~~~Fgt~GiRG~~~-------~~lt~~~v~~~~~a~~~~l~~~-----------~~VvIG~D~R~ss~~~~~a~a~gl~~ 63 (455)
T 2f7l_A 2 GKLFGTDGVRGIVN-------KELTPELVLKLSKAIGTFFGKN-----------SKILVGRDVRAGGDMLVKIVEGGLLS 63 (455)
T ss_dssp CSSCCSSSEEEEBT-------TTBCHHHHHHHHHHHHHHHCTT-----------CEEEEEECSCTTHHHHHHHHHHHHHH
T ss_pred CCcccCCCeeeecC-------CCcCHHHHHHHHHHHHHHHccC-----------CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999997 4899999999999999999632 47999999999999999999999999
Q ss_pred CCCeEEEeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 152 ~Gi~V~d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
+|++|+++|++|||+++|++ +++++++||||
T Consensus 64 ~G~~V~~~g~~pTP~~~~av--~~~~~~~GImI 94 (455)
T 2f7l_A 64 VGVEVYDGGMAPTPALQYAV--KTLGYDGGVVI 94 (455)
T ss_dssp TTCEEEEEEECCHHHHHHHH--HHHCCSEEEEE
T ss_pred CCCcEEEcCCCCcHHHHHHH--HhcCCCeEEEE
Confidence 99999999999999999999 67899999998
No 5
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=99.88 E-value=8.3e-23 Score=187.60 Aligned_cols=96 Identities=30% Similarity=0.450 Sum_probs=88.8
Q ss_pred hhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHH
Q 029919 71 IRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLA 150 (185)
Q Consensus 71 ~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~ 150 (185)
-+++|+++||||+++ ++||+++++++|+|||+|+.+. + ..+|+||||+|.+|++|+++++++|+
T Consensus 24 ~~~~Fgt~GiRG~~~-------~~lt~~~~~~ig~A~~~~l~~~-----~----~~~VvVG~D~R~ss~~~~~a~a~gl~ 87 (485)
T 3uw2_A 24 SQSIFKAYDIRGVIG-------KTLDADVARSIGRAFGSEVRAQ-----G----GDAVVVARDGRLSGPELVGALADGLR 87 (485)
T ss_dssp CGGGBCSSSEEEEBT-------TTBCHHHHHHHHHHHHHHHHHT-----T----CCEEEEEECSCTTHHHHHHHHHHHHH
T ss_pred cccccccCCEEEEeC-------CCCCHHHHHHHHHHHHHHHHHc-----C----CCEEEEEECCCcCHHHHHHHHHHHHH
Confidence 367999999999998 4899999999999999999764 1 25799999999999999999999999
Q ss_pred hCCCeEEEeccCChhHHHHhhhCC--------CCCCceeEEe
Q 029919 151 RAGCLVFDMGLATTPACFMSTLLP--------PFAYDASIMG 184 (185)
Q Consensus 151 s~Gi~V~d~Gl~pTP~l~yav~~~--------~~~adgGIMI 184 (185)
++|++|+++|++|||+++|++ + ++++++||||
T Consensus 88 a~Gi~V~~~g~~pTP~l~~av--~~~~~~~~~~~~~~~GImI 127 (485)
T 3uw2_A 88 AAGVDVVDVGMVPTPVGYFAA--SVPLALSGGERRVDSCIVV 127 (485)
T ss_dssp HTTCEEEEEEECCHHHHHHHT--TSCEEETTEEECCCCEEEE
T ss_pred HCCCEEEEeCCCChHHHHHHH--hccccccccccCCCeEEEE
Confidence 999999999999999999999 6 6789999998
No 6
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=99.88 E-value=1.1e-22 Score=184.31 Aligned_cols=96 Identities=35% Similarity=0.495 Sum_probs=87.9
Q ss_pred hcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhC
Q 029919 73 RLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARA 152 (185)
Q Consensus 73 ~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~ 152 (185)
++|+++||||+++ .+||++++.++++||++|+.++. ..+++|+||||+|.+|++|+++++++|+++
T Consensus 3 ~~Fgt~GiRG~~~-------~~lt~~~v~~~~~a~~~~l~~~~-------~~~~~VvIG~D~R~ss~~l~~a~~~gl~~~ 68 (455)
T 1wqa_A 3 KLFGTFGVRGIAN-------EKITPEFAMKIGMAFGTLLKREG-------RKKPLVVVGRDTRVSGEMLKEALISGLLSV 68 (455)
T ss_dssp TTCBTTBEEEEBT-------TTBCHHHHHHHHHHHHHHHHHTT-------CSSCEEEEEECSCTTHHHHHHHHHHHHHHT
T ss_pred cccCCCceeeecC-------CCcCHHHHHHHHHHHHHHHHhcC-------CCCCeEEEEeCCCcCHHHHHHHHHHHHHHc
Confidence 5899999999998 47999999999999999997641 123579999999999999999999999999
Q ss_pred CCeEEEeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 153 GCLVFDMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 153 Gi~V~d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
|++|+++|++|||+++|++ +++++++||||
T Consensus 69 G~~V~~~g~~pTP~l~~~v--~~~~~~~GimI 98 (455)
T 1wqa_A 69 GCDVIDVGIAPTPAVQWAT--KHFNADGGAVI 98 (455)
T ss_dssp TCEEEEEEECCHHHHHHHH--HHTTCSEEEEE
T ss_pred CCeEEEeCCCChHHHHHHH--HhcCCCEEEEE
Confidence 9999999999999999999 57899999998
No 7
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=99.86 E-value=1e-21 Score=178.66 Aligned_cols=94 Identities=22% Similarity=0.262 Sum_probs=86.1
Q ss_pred hcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhC
Q 029919 73 RLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARA 152 (185)
Q Consensus 73 ~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~ 152 (185)
-+|+++||||+++ ++||++++.++++||++|+.+. + ..+|+||||+|.+|++|+++++++|+++
T Consensus 12 l~FGt~GiRG~~~-------~~lt~~~v~~~~~a~~~~l~~~-----~----~~~VvVG~D~R~ss~~~~~a~a~gl~~~ 75 (464)
T 1tuo_A 12 IRFGTEGFRGVIA-------REFTFATLHRLAEAYGRHLLER-----G----GGLVVVGHDTRFLADAFARALSGHLAGM 75 (464)
T ss_dssp CCCCSSSEEEEBT-------TTBCHHHHHHHHHHHHHHHHHT-----T----CCEEEEEECSSTTHHHHHHHHHHHHHHH
T ss_pred ccccCCCcceecC-------CCcCHHHHHHHHHHHHHHHHHh-----C----CCeEEEeeCCCCCHHHHHHHHHHHHHHC
Confidence 3699999999998 4899999999999999999864 1 2579999999999999999999999999
Q ss_pred CCeEE-EeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 153 GCLVF-DMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 153 Gi~V~-d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
|++|+ +.|++|||+++|++ +++++++||||
T Consensus 76 G~~V~~~~g~~pTP~~~~av--~~~~~~~GImI 106 (464)
T 1tuo_A 76 GLKVVLLKGPVPTPLLSFAV--RHLKAAGGAML 106 (464)
T ss_dssp TCEEEEESSSCCHHHHHHHH--HHTTCSEEEEE
T ss_pred CCeEEEcCCCCCHHHHHHHH--HHhCCCceEEE
Confidence 99996 67999999999999 67899999998
No 8
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=99.84 E-value=2.7e-21 Score=176.57 Aligned_cols=97 Identities=24% Similarity=0.246 Sum_probs=85.4
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHh
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s 151 (185)
+..|+++||||++. +||++++.++++|||+|+.+... .....+|+||||+|.+|++|+++++++|++
T Consensus 9 ~~~FGT~GiRG~~~--------~lt~~~v~~~~~a~a~~l~~~~~-----~~~~~~VvVG~D~R~ss~~~~~a~~~gl~a 75 (481)
T 4hjh_A 9 SLKFGTSGLRGLAV--------ELNGLPAYAYTMAFVQMLAAKGQ-----LQKGDKVFVGRDLRPSSPDIAALAMGAIED 75 (481)
T ss_dssp CCEECSSSEEEEHH--------HHTTHHHHHHHHHHHHHHHHTTS-----CCTTCEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred cCcccCCCcceecC--------CCCHHHHHHHHHHHHHHHHhhcc-----ccCCCeEEEeecCCcCHHHHHHHHHHHHHH
Confidence 45799999999993 79999999999999999975410 012367999999999999999999999999
Q ss_pred CCCeEEEeccCChhHHHHhhhCCCCCCceeEEe
Q 029919 152 AGCLVFDMGLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 152 ~Gi~V~d~Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
+|++|+++|++|||+++|++ +++++ +||||
T Consensus 76 ~Gi~V~~~g~~pTP~l~fav--~~~~~-~GImI 105 (481)
T 4hjh_A 76 AGFTPVNCGVLPTPALSYYA--MGAKA-PSIMV 105 (481)
T ss_dssp TTCEEEEEEECCHHHHHHHH--HHTTC-CEEEE
T ss_pred CCCEEEEeCCcCcHHHHHHH--HhcCC-ceEEE
Confidence 99999999999999999999 56787 79998
No 9
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=99.81 E-value=1.8e-20 Score=172.42 Aligned_cols=97 Identities=20% Similarity=0.133 Sum_probs=84.9
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHh
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s 151 (185)
+.+|+++||||++.. .+||++++.++++|||+|+.+. + ...+|+||||+|.+|++|+++++++|++
T Consensus 23 ~~~FGT~GiRG~~~~------~~lt~~~v~~i~~a~~~~l~~~-----~---~~~~VvIG~D~R~~S~~~~~~~~~gl~a 88 (524)
T 2z0f_A 23 GVRFGTSGHRGSSLK------ATFTEAHVLAIAQAIAELRPSF-----G---ATGPLFLAKDTHALSEPAWATALSVFAA 88 (524)
T ss_dssp SCCEETTEEEECGGG------TSSCHHHHHHHHHHHHHHTTTT-----T---CCSCEEEEECSCTTHHHHHHHHHHHHHH
T ss_pred cCcccCccccCCccc------CCCCHHHHHHHHHHHHHHHHHh-----C---CCCeEEEEeCCCcchHHHHHHHHHHHHH
Confidence 457999999997531 4899999999999999998754 1 1246999999999999999999999999
Q ss_pred CCCeEEEe---ccCChhHHHHhhhCCCCC-----CceeEEe
Q 029919 152 AGCLVFDM---GLATTPACFMSTLLPPFA-----YDASIMG 184 (185)
Q Consensus 152 ~Gi~V~d~---Gl~pTP~l~yav~~~~~~-----adgGIMI 184 (185)
+|++|+++ |++|||+++|++ ++++ +++||||
T Consensus 89 ~Gi~V~~~~~~G~~pTP~l~~av--~~~~~~~~~a~~GImI 127 (524)
T 2z0f_A 89 HGIEVRVEADGDYTPTPLVSLAI--LEHNAHHEAKADGVLL 127 (524)
T ss_dssp TTCCEEEESSSSCCCHHHHHHHH--HHHHTTCSSCCEEEEE
T ss_pred CCCEEEEeCCCCccCcHHHHHHH--HHhCCCccccceEEEE
Confidence 99999985 899999999999 5677 6999998
No 10
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=99.81 E-value=3.5e-20 Score=173.09 Aligned_cols=97 Identities=23% Similarity=0.196 Sum_probs=85.6
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHh
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLAR 151 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s 151 (185)
+..|+++||||+++. .+||++++.++++||++|+.+. + ...+|+||||+|.+|++++++++++|++
T Consensus 63 r~~FGT~GiRG~~~~------~~ln~~~v~~i~~A~a~~l~~~-----~---~~~~VvVG~D~R~~S~~~~~~a~~~L~a 128 (570)
T 3na5_A 63 AVKFGTSGHRGSAGR------HSFNEPHILAIAQAIAEERAKN-----G---ITGPCYVGKDTHALSEPAFISVLEVLAA 128 (570)
T ss_dssp SCCCBTTBEEECGGG------TSSSHHHHHHHHHHHHHHHHHT-----T---CCSCEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred cceecCCCceeecCC------CCCCHHHHHHHHHHHHHHHHHh-----C---CCCeEEEEeCCCcccHHHHHHHHHHHHH
Confidence 356999999999863 4899999999999999999764 1 1257999999999999999999999999
Q ss_pred CCCeEE---EeccCChhHHHHhhhCCCCC-----CceeEEe
Q 029919 152 AGCLVF---DMGLATTPACFMSTLLPPFA-----YDASIMG 184 (185)
Q Consensus 152 ~Gi~V~---d~Gl~pTP~l~yav~~~~~~-----adgGIMI 184 (185)
+|++|+ |+|++|||+++|++ ++++ +++||||
T Consensus 129 ~Gi~V~~~~d~g~~PTP~vsfav--~~~~~~~~~~~~GImI 167 (570)
T 3na5_A 129 NGVDVIVQENNGFTPTPAVSNAI--LVHNKKGGPLADGIVI 167 (570)
T ss_dssp TTCCEEEEGGGCCCCHHHHHHHH--HHHHHTCSSCCEEEEE
T ss_pred CCCEEEEeCCCCccChHHHHHHH--HHhCCCccccceEEEE
Confidence 999999 57999999999999 4566 8999998
No 11
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=99.78 E-value=1.4e-19 Score=168.48 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=86.2
Q ss_pred hhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCC-eEEEEecCCCChHHHHHHHHHHHH
Q 029919 72 RRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDV-KVSLGKDPRVSGPSLSVAVFAGLA 150 (185)
Q Consensus 72 ~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~-~VvVGrD~R~SS~~la~ava~gL~ 150 (185)
+.+|+++||||+++ +.+|++.+.++++|+++++.+.. .... +|+||||+|.+|++|+++++++|+
T Consensus 18 ~~~FGT~GiRG~~~-------~~~t~~~~~~~~~a~~~~l~~~~-------~~~~~~VvIG~D~R~sS~~~a~~~a~~l~ 83 (572)
T 1kfi_A 18 GQKPGTSGLRKKVS-------EATQPNYLENFVQSIFNTLRKDE-------LKPKNVLFVGGDGRYFNRQAIFSIIRLAY 83 (572)
T ss_dssp TCCCBTTBEEEEHH-------HHTSTTHHHHHHHHHHHHSCGGG-------SSSSCEEEEEECCCTTHHHHHHHHHHHHH
T ss_pred cCCccCCccceEec-------ceecHHHHHHHHHHHHHHHhhhc-------cCCCCEEEEEecCCCCHHHHHHHHHHHHH
Confidence 35799999999998 36999999999999999986421 0124 799999999999999999999999
Q ss_pred hCCCeEEEe---ccCChhHHHHhhhCCCC-----CCceeEEe
Q 029919 151 RAGCLVFDM---GLATTPACFMSTLLPPF-----AYDASIMG 184 (185)
Q Consensus 151 s~Gi~V~d~---Gl~pTP~l~yav~~~~~-----~adgGIMI 184 (185)
++|++|+++ |++|||+++|++ +++ ++++||||
T Consensus 84 a~Gi~V~~~~~~G~~pTP~l~fav--~~~n~~~~~a~~GImI 123 (572)
T 1kfi_A 84 ANDISEVHVGQAGLMSTPASSHYI--RKVNEEVGNCIGGIIL 123 (572)
T ss_dssp HTTCSEEEEEGGGCBCHHHHHHHH--HHHHHHSCCEEEEEEE
T ss_pred HCCCEEEEecCCCCCChHHHHHHH--HHhccccCCcceEEEE
Confidence 999999999 999999999999 578 89999998
No 12
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=99.74 E-value=5e-19 Score=164.89 Aligned_cols=97 Identities=13% Similarity=0.073 Sum_probs=83.8
Q ss_pred hcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhC
Q 029919 73 RLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARA 152 (185)
Q Consensus 73 ~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~ 152 (185)
..||++||||.++....+ .++||+++.+|+.|++.++.+ ..+|+||||+|.+|++++++++++|+++
T Consensus 14 ~~fGTsGiRG~v~~~~~~--~~~t~~f~~~l~~A~g~~~~~-----------g~~VvVG~D~R~~s~~~~~~~a~~l~a~ 80 (561)
T 3pmg_A 14 QKPGTSGLRKRVKVFQSS--TNYAENFIQSIISTVEPAQRQ-----------EATLVVGGDGRFYMKEAIQLIVRIAAAN 80 (561)
T ss_dssp CCCBTTBEEEEHHHHHHS--TTHHHHHHHHHHHTSCGGGTT-----------TCEEEEEECCCTTHHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCeeeCCCCCC--cCccHHHHHHHHHHHHhhhcC-----------CCEEEEEeCCCccHHHHHHHHHHHHHHC
Confidence 368999999998630000 279999999999999876532 1479999999999999999999999999
Q ss_pred CCeEEEe---ccCChhHHHHhhhCCCCCCceeEEe
Q 029919 153 GCLVFDM---GLATTPACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 153 Gi~V~d~---Gl~pTP~l~yav~~~~~~adgGIMI 184 (185)
|++|+++ |++|||+++|++ +++++++||||
T Consensus 81 Gv~V~~~~~~g~~pTP~vs~av--~~~~a~gGImI 113 (561)
T 3pmg_A 81 GIGRLVIGQNGILSTPAVSCII--RKIKAIGGIIL 113 (561)
T ss_dssp TCCEEEEEEEEECCHHHHHHHH--HHHTCSEEEEE
T ss_pred CCEEEEecCCCccCHHHHHHHH--HHhcCCeEEEE
Confidence 9999998 999999999999 67899999998
No 13
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=98.81 E-value=1.2e-08 Score=94.44 Aligned_cols=93 Identities=22% Similarity=0.165 Sum_probs=74.2
Q ss_pred hhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhc-ccc-------C--------------CCC---C--
Q 029919 71 IRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSL-ENE-------R--------------GRP---V-- 123 (185)
Q Consensus 71 ~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~-~~~-------~--------------g~~---~-- 123 (185)
.+.+|+++|+||.+ +|||+++.++|.|++.-..... ... + |.. .
T Consensus 20 ~~~~fGt~G~RG~~---------~~~~~~~~~~g~a~~~r~~~~~~~~~GImITASHNP~~dNGiK~~~~~G~~l~~~~e 90 (544)
T 2dka_A 20 VTFTYGTAGFRMKA---------DKLDYVTFTVGIIASLRSKYLQGKTVGVMITASHNPPEDNGVKVVDPLGSMLESSWE 90 (544)
T ss_dssp CCCCCBTTBEEEEG---------GGCHHHHHHHHHHHHHHHHHTTTCEEEEEECCC-CCTTEEEEEEECTTSSBCCGGGH
T ss_pred CeeEeCCCCccccc---------ccCHHHHHHHHHHHHHHHHhcCCcCceEEEeCCCCCcccCceeeecCCCCcCCHHHH
Confidence 46799999999976 5999999999999997443321 100 0 100 0
Q ss_pred ----------------------------------------CCCeEEEEecCCCChHHHHHHHHHHHHhC-CCeEEEeccC
Q 029919 124 ----------------------------------------EDVKVSLGKDPRVSGPSLSVAVFAGLARA-GCLVFDMGLA 162 (185)
Q Consensus 124 ----------------------------------------~~~~VvVGrD~R~SS~~la~ava~gL~s~-Gi~V~d~Gl~ 162 (185)
...+|+||||+|.+++.+.+++.++|.+. |++|.++|.+
T Consensus 91 ~~~~~~an~~~~~~~~~~~~~~~I~~~i~~~~~~~~~~~~~~~~v~vg~d~r~s~~~l~~al~~gl~~~~G~~v~~~G~~ 170 (544)
T 2dka_A 91 KYATDLANASPSPSNDSEGEKNSLVEVIKNLVSDLKIDLSIPANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLF 170 (544)
T ss_dssp HHHHHHHHSBSCC------CTTBHHHHHHHHHHHTTCCTTSCEEEEEEECSCTTHHHHHHHHHHHHHTSSSEEEEEEEEC
T ss_pred HHHHHHhcccccccccccchHHHHHHHHHHHHhhhcCCcccCceEEeccCCCCCCHHHHHHHHhhhhhhcCCeEEEeccc
Confidence 01358999999999999999999999999 9999999999
Q ss_pred ChhHHHHhhh
Q 029919 163 TTPACFMSTL 172 (185)
Q Consensus 163 pTP~l~yav~ 172 (185)
+||+++|++.
T Consensus 171 ttP~l~~~v~ 180 (544)
T 2dka_A 171 TTPELHYVTR 180 (544)
T ss_dssp CHHHHHHHHH
T ss_pred ccchheeeee
Confidence 9999999873
No 14
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=90.84 E-value=0.7 Score=36.59 Aligned_cols=57 Identities=23% Similarity=0.156 Sum_probs=42.1
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh-----hHHHHhhhC--CCCCCceeEEe
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT-----P~l~yav~~--~~~~adgGIMI 184 (185)
.+|+||-|. .+-.|++.+.+-|.+.|++|+|+|.-.. |.+...+.. ..-.++-||.|
T Consensus 13 ~~i~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIli 76 (155)
T 1o1x_A 13 VKIAIASDH--AAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILL 76 (155)
T ss_dssp CEEEEEECS--TTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred eeEEEeeCc--hHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEE
Confidence 579999995 7899999999999999999999996443 333322210 23456778876
No 15
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=89.73 E-value=0.65 Score=36.47 Aligned_cols=56 Identities=27% Similarity=0.294 Sum_probs=40.7
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh-----hHHHHhhhC--CCCCCceeEEe
Q 029919 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 127 ~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT-----P~l~yav~~--~~~~adgGIMI 184 (185)
+|+||-|. .+-.+++.+.+-|...|++|+|+|.-.. |.+...+.. ..-.++-||.|
T Consensus 3 kIaigsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIli 65 (149)
T 2vvr_A 3 KIAFGCDH--VGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILI 65 (149)
T ss_dssp EEEEEECT--TGGGGHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred EEEEEeCc--hhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEE
Confidence 68999995 7889999999999999999999996433 333332210 23456778876
No 16
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=87.31 E-value=0.78 Score=36.52 Aligned_cols=57 Identities=23% Similarity=0.258 Sum_probs=40.7
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccC------ChhHHHHhhhC--CCCCCceeEEe
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLA------TTPACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~------pTP~l~yav~~--~~~~adgGIMI 184 (185)
.+|+||-|. .+..+++.+.+-|...|++|+|+|.- .=|.+...+.. ..-.++-||.|
T Consensus 4 MkIaigsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~g~~d~GIli 68 (162)
T 2vvp_A 4 MRVYLGADH--AGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVL 68 (162)
T ss_dssp CEEEEEECH--HHHHHHHHHHHHHHHTTCEEEECSCCSCCTTCCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CEEEEEeCc--hhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHcCCCceEEEE
Confidence 479999994 78999999999999999999999843 23433333210 12346777776
No 17
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=86.67 E-value=1.7 Score=34.07 Aligned_cols=56 Identities=23% Similarity=0.272 Sum_probs=41.7
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh-----hHHHHhhhC--CCCCCceeEEe
Q 029919 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 127 ~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT-----P~l~yav~~--~~~~adgGIMI 184 (185)
+|+||-|. .+-.|++.+.+-|.+.|++|+|+|.-.. |.+...+.. ..-.++-||.|
T Consensus 2 kI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIli 64 (149)
T 3he8_A 2 KIGIGSDH--GGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVI 64 (149)
T ss_dssp EEEEEECG--GGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred EEEEEECc--hhHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 58999995 6899999999999999999999986543 444433221 23456778876
No 18
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=85.96 E-value=1.9 Score=34.58 Aligned_cols=58 Identities=22% Similarity=0.275 Sum_probs=42.8
Q ss_pred CCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh-----hHHHHhhhC--CCCCCceeEEe
Q 029919 125 DVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 125 ~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT-----P~l~yav~~--~~~~adgGIMI 184 (185)
..+|+||-|. .+-.|++.+.+-|...|++|+|+|.-.. |.+...+.. ..-.++-||.|
T Consensus 20 ~MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIli 84 (169)
T 3ph3_A 20 HMKIGIGSDH--GGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVI 84 (169)
T ss_dssp -CEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCEEEEEeCc--hHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3679999995 6889999999999999999999986543 444443321 23456778876
No 19
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=84.75 E-value=3.3 Score=32.46 Aligned_cols=57 Identities=25% Similarity=0.301 Sum_probs=42.0
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh------hHHHHhhhCCCCCCceeEEe
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT------PACFMSTLLPPFAYDASIMG 184 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT------P~l~yav~~~~~~adgGIMI 184 (185)
.+|+||-|. .+-.|++.+.+-|.+.|++|+|+|.-.+ |.....+...-..++-||.|
T Consensus 8 mkI~igsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~~d~GIli 70 (148)
T 4em8_A 8 KRVFLSSDH--AGVELRLFLSAYLRDLGCEVFDCGCDPKEHSVDYPDYVHDVVREVSDTSFGVLI 70 (148)
T ss_dssp SEEEEEECG--GGHHHHHHHHHHHHHTTCEEEECCCCTTCSCCCGGGGTHHHHTTCBTTBEEEEE
T ss_pred eEEEEEECc--hhHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCeEEEE
Confidence 479999995 6899999999999999999999986432 44444443211156777776
No 20
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=80.68 E-value=2.6 Score=33.69 Aligned_cols=58 Identities=21% Similarity=0.268 Sum_probs=41.0
Q ss_pred CCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh-----hHHHHhhh--CCCCCCceeEEe
Q 029919 125 DVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT-----PACFMSTL--LPPFAYDASIMG 184 (185)
Q Consensus 125 ~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT-----P~l~yav~--~~~~~adgGIMI 184 (185)
+.+|+||-|. .+-.|++.+.+-|.+.|++|+|+|.-.. |.+...+. ...-.++-||.|
T Consensus 21 ~MkIaIgsDh--aG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIli 85 (166)
T 3s5p_A 21 SMKVAFASDH--GGRDLRMFLQQRASAHGYEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILV 85 (166)
T ss_dssp TCEEEEEECG--GGHHHHHHHHHHHHHTTCEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEE
T ss_pred ceEEEEEECc--hHHHHHHHHHHHHHHCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4689999995 6899999999999999999999986443 33222221 023456778776
No 21
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=78.11 E-value=6.3 Score=34.83 Aligned_cols=68 Identities=9% Similarity=-0.000 Sum_probs=46.5
Q ss_pred cceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCC-ChHHHHHHHHHHHHhCCCeE
Q 029919 78 SDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRV-SGPSLSVAVFAGLARAGCLV 156 (185)
Q Consensus 78 sGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~-SS~~la~ava~gL~s~Gi~V 156 (185)
-+|+-++.. .|. -+ .+...++-..|-+|-.... .+.+|+|-|++.. +.+.++++++++|.+.|+++
T Consensus 231 Ldi~~I~P~--HGp--i~-r~~~~~ii~~Y~~w~~~~~--------~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~ 297 (410)
T 4dik_A 231 LKIKALLPG--HGL--IW-KKDPQRLLNHYVSVAKGDP--------KKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTP 297 (410)
T ss_dssp SCCSEEEES--SSC--BB-SSCHHHHHHHHHHHHHTCC--------CTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEecC--Ccc--hh-hcCHHHHHHHHHHhhcccc--------cccceeeEEecccChHHHHHHHHHHHHHhcCCce
Confidence 356666642 221 12 2345667777888765331 2457999999985 45779999999999999997
Q ss_pred EE
Q 029919 157 FD 158 (185)
Q Consensus 157 ~d 158 (185)
..
T Consensus 298 ~~ 299 (410)
T 4dik_A 298 VV 299 (410)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 22
>2ehp_A AQ_1627 protein; putative protein, NPPSFA, national project protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eiu_A
Probab=76.74 E-value=9.5 Score=28.65 Aligned_cols=55 Identities=20% Similarity=0.116 Sum_probs=40.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEe
Q 029919 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 94 dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~ 159 (185)
.||.++..|+|.|+...++-..+ .+++ +++--|.. -+..++.-|++..|-+|+..
T Consensus 19 PLTaENL~R~GLALCtLl~iek~------~eeP-~l~i~elN----FltmalsVGFM~gGG~V~vg 73 (126)
T 2ehp_A 19 PLTAENLFRIGLALCTLWILDKE------IEEP-TLSIPETN----FVTLALSVGFMNAGGSVNVG 73 (126)
T ss_dssp TSSHHHHHHHHHHHHHHHHHTTC------CSSC-EEEESSCS----HHHHHHHHHHHHTTCEEEES
T ss_pred cccHHHHHHHHHHHHHHHHHHhh------hcCC-eeeecccc----eeeeeeeeeEeccCcceEee
Confidence 69999999999999998764421 1233 45555654 46677888999999998865
No 23
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=76.13 E-value=3.6 Score=34.15 Aligned_cols=37 Identities=14% Similarity=0.290 Sum_probs=30.7
Q ss_pred CeEEEEecCCCChH---HHHHHHHHHHHhCCCeEEEeccCC
Q 029919 126 VKVSLGKDPRVSGP---SLSVAVFAGLARAGCLVFDMGLAT 163 (185)
Q Consensus 126 ~~VvVGrD~R~SS~---~la~ava~gL~s~Gi~V~d~Gl~p 163 (185)
.+|+||-|.- ... .+.+.+.+-|...|++|+|+|.-.
T Consensus 4 MkIaIgsDha-~~lKn~ilk~~i~~~L~~~G~eV~D~G~~s 43 (216)
T 2ppw_A 4 MKIALINENS-QASKNHIIYDSLKEATDKKGYQLFNYGMRG 43 (216)
T ss_dssp CEEEECCCTT-TGGGHHHHHHHHHHHHHHHTCEEEECSCCS
T ss_pred cEEEEEcCCh-HhhhhhhHHHHHHHHHHHCCCEEEEeCCCC
Confidence 5799999988 432 266899999999999999999753
No 24
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=75.32 E-value=4.2 Score=32.84 Aligned_cols=57 Identities=11% Similarity=0.096 Sum_probs=42.3
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHh--CCCeEEEeccCC-----hhHHHHhhhC--CCCCCceeEEe
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLAR--AGCLVFDMGLAT-----TPACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s--~Gi~V~d~Gl~p-----TP~l~yav~~--~~~~adgGIMI 184 (185)
.+|+||-|. .+-.|++.+.+-|.+ .|++|+|+|.-. =|.+...+.. ..-.++-||.|
T Consensus 23 MkIaIgsDh--aG~~lK~~i~~~L~~~~~G~eV~D~G~~s~~s~DYPd~a~~vA~~V~~g~~d~GIli 88 (179)
T 3k7p_A 23 RRVAIGTDH--PAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLA 88 (179)
T ss_dssp EEEEEEECT--GGGGGHHHHHHHHHHTCTTEEEEECSCSSSSCCCHHHHHHHHHHHHHTTSSSEEEEE
T ss_pred eEEEEEECc--hHHHHHHHHHHHHHhcCCCCeEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 379999995 688999999999999 999999998643 2544433321 23456778876
No 25
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=68.58 E-value=8.1 Score=31.27 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=42.3
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCC--CeEEEeccC------ChhHHHHhhhC--CCCCCceeEEe
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAG--CLVFDMGLA------TTPACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~G--i~V~d~Gl~------pTP~l~yav~~--~~~~adgGIMI 184 (185)
.+|+||-|. .+-.|++.+.+-|.+.| ++|+|+|.- .=|.+...+.. ..-.++-||.|
T Consensus 30 MkIaIgsDH--aG~~LK~~i~~~L~~~G~g~eV~D~G~~s~~e~~DYPd~a~~vA~~V~~ge~d~GIli 96 (184)
T 3sgw_A 30 LRLAIACDD--AGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMI 96 (184)
T ss_dssp EEEEEEECG--GGHHHHHHHHHHHTTCTTEEEEEECSCCSTTCCCCHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred cEEEEEECc--hhHHHHHHHHHHHHhCCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 579999995 68999999999999999 799999975 23444433220 23456778876
No 26
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=67.39 E-value=8.4 Score=29.11 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=31.6
Q ss_pred CCeEEEEecCCC-ChHHHHHHHHHHHHhCCCeEEEeccCC
Q 029919 125 DVKVSLGKDPRV-SGPSLSVAVFAGLARAGCLVFDMGLAT 163 (185)
Q Consensus 125 ~~~VvVGrD~R~-SS~~la~ava~gL~s~Gi~V~d~Gl~p 163 (185)
+.+|+|-|++.. +.+.++++++++|...|++|..+.+..
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcC
Confidence 357999999884 789999999999999998875554443
No 27
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=67.16 E-value=5.9 Score=32.79 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=39.1
Q ss_pred CCeEEEEecCCCChHHHHH-----HHHHHHHhCCCeEEEecc--C-----ChhHHHHhhh--CCCCCCceeEEe
Q 029919 125 DVKVSLGKDPRVSGPSLSV-----AVFAGLARAGCLVFDMGL--A-----TTPACFMSTL--LPPFAYDASIMG 184 (185)
Q Consensus 125 ~~~VvVGrD~R~SS~~la~-----ava~gL~s~Gi~V~d~Gl--~-----pTP~l~yav~--~~~~~adgGIMI 184 (185)
..+|+||-|.- ..+++ .+.+-|...|++|+|+|. - .=|.....+. ...-.++-||+|
T Consensus 3 ~MkIaigsDha---~~lK~~~i~~~l~~~L~~~G~eV~D~G~~~~~~~~~dYpd~a~~vA~~V~~g~~d~GIli 73 (214)
T 3ono_A 3 AMKIALMMENS---QAAKNAMVAGELNSVAGGLGHDVFNVGMTDENDHHLTYIHLGIMASILLNSKAVDFVVTG 73 (214)
T ss_dssp CCEEEECCCGG---GGGGHHHHHHHHHHHHHHTTCEEEECSCSSTTSSCCCHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred ccEEEEECCCc---HHHHChhHHHHHHHHHHHCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 36899999976 55666 999999999999999994 2 2233333221 023456778876
No 28
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=42.00 E-value=45 Score=24.82 Aligned_cols=34 Identities=26% Similarity=0.209 Sum_probs=26.4
Q ss_pred eEEEEecCC-CChHHHHHHHHHHHHhCCCeEEEec
Q 029919 127 KVSLGKDPR-VSGPSLSVAVFAGLARAGCLVFDMG 160 (185)
Q Consensus 127 ~VvVGrD~R-~SS~~la~ava~gL~s~Gi~V~d~G 160 (185)
+|+|-|.+. -+.+.++++++++|...|++|..+.
T Consensus 2 kv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 36 (161)
T 3hly_A 2 SVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVD 36 (161)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 367777776 4788999999999999998764443
No 29
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=38.69 E-value=1.2e+02 Score=22.70 Aligned_cols=60 Identities=20% Similarity=0.194 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEe-ccCChh
Q 029919 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (185)
Q Consensus 94 dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~-Gl~pTP 165 (185)
.-||..+...++.+++.+.+. |. ....|. =+..-. + .++++.+|...|++|..+ +..|.|
T Consensus 55 k~tp~AA~~aa~~~~~~~~~~-----Gi--~~v~V~-vkG~G~-G---re~airaL~~~Gl~I~~I~DvTpiP 115 (129)
T 2vqe_K 55 KGTPYAAQLAALDAAKKAMAY-----GM--QSVDVI-VRGTGA-G---REQAIRALQASGLQVKSIVDDTPVP 115 (129)
T ss_dssp GGSHHHHHHHHHHHHHHHHTT-----TC--CEEEEE-EESCCT-T---HHHHHHHHHTSSSEEEECEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHh-----CC--eEEEEE-EECCCC-C---HHHHHHHHHHCCCEEEEEEEcCCCC
Confidence 678999999999999988764 31 112233 344432 2 457789999999999887 666665
No 30
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=36.37 E-value=1.7e+02 Score=24.41 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=54.8
Q ss_pred cccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHH
Q 029919 61 EVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPS 140 (185)
Q Consensus 61 ~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~ 140 (185)
+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-----------rvpviaGvg~~~t~~- 98 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD-----------RARVIAGAGTYDTAH- 98 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------TSEEEEECCCSCHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-----------CCeEEEeCCCCCHHH-
Confidence 33455555555444445789999888888876789999888888777776532 246777743332322
Q ss_pred HHHHHHHHHHhCCCeEEEe
Q 029919 141 LSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 141 la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 99 -ai~la~~a~~~Gadavlv 116 (304)
T 3l21_A 99 -SIRLAKACAAEGAHGLLV 116 (304)
T ss_dssp -HHHHHHHHHHHTCSEEEE
T ss_pred -HHHHHHHHHHcCCCEEEE
Confidence 334455667778886654
No 31
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.52 E-value=61 Score=25.82 Aligned_cols=44 Identities=18% Similarity=0.111 Sum_probs=31.4
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHhCCCeEEEecc-CChhHHHHhh
Q 029919 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMST 171 (185)
Q Consensus 125 ~~~VvVGr---D~R~SS~~la~ava~gL~s~Gi~V~d~Gl-~pTP~l~yav 171 (185)
.++|+++- |.+.-|..+ +...|...|++|+|+|. +|...+--++
T Consensus 92 ~~~vll~~v~gd~HdiG~~i---v~~~l~~~G~~Vi~LG~~vp~e~iv~~~ 139 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRL---VTTMLGANGFQIVDLGVDVLNENVVEEA 139 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHH---HHHHHHHTSCEEEECCSSCCHHHHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHH---HHHHHHHCCCeEEEcCCCCCHHHHHHHH
Confidence 46898885 777666655 55678999999999987 4554543444
No 32
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=34.09 E-value=1.6e+02 Score=24.64 Aligned_cols=87 Identities=11% Similarity=0.015 Sum_probs=55.2
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++.-|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 39 dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-----------rvpViaGvg~~~t~~ 107 (315)
T 3na8_A 39 DGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH-----------RVPTIVSVSDLTTAK 107 (315)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-----------SSCBEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEecCCCCHHH
Confidence 344555556655444445789999888877776789999888887777766432 234666643332322
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 108 --ai~la~~A~~~Gadavlv 125 (315)
T 3na8_A 108 --TVRRAQFAESLGAEAVMV 125 (315)
T ss_dssp --HHHHHHHHHHTTCSEEEE
T ss_pred --HHHHHHHHHhcCCCEEEE
Confidence 334456667788886654
No 33
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=33.20 E-value=14 Score=30.96 Aligned_cols=57 Identities=16% Similarity=0.100 Sum_probs=37.5
Q ss_pred EEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCC--------hhHHHHhhhC--CCCCCceeEEe
Q 029919 128 VSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLAT--------TPACFMSTLL--PPFAYDASIMG 184 (185)
Q Consensus 128 VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~p--------TP~l~yav~~--~~~~adgGIMI 184 (185)
|+++-|.-..-..|++.+.+-|...|++|+|+|.-. =|.....+.. ..-.++-||.|
T Consensus 24 li~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIli 90 (231)
T 3c5y_A 24 LIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTG 90 (231)
T ss_dssp ECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEE
T ss_pred EEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEE
Confidence 344555544555999999999999999999999753 2333333220 12346777776
No 34
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=33.07 E-value=2e+02 Score=23.58 Aligned_cols=86 Identities=13% Similarity=0.113 Sum_probs=57.3
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+ +..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-----------r~pvi~Gvg~~~t~~ 84 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK-----------RIPVIAGTGSNNTAA 84 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-----------SSCEEEECCCSSHHH
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEeCCcccHHH
Confidence 56 777777766554445789999887877766679999888887777766431 235777754333333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 85 --ai~la~~a~~~Gadavlv 102 (291)
T 3a5f_A 85 --SIAMSKWAESIGVDGLLV 102 (291)
T ss_dssp --HHHHHHHHHHTTCSEEEE
T ss_pred --HHHHHHHHHhcCCCEEEE
Confidence 334466678889996654
No 35
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.93 E-value=69 Score=24.48 Aligned_cols=64 Identities=25% Similarity=0.361 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecC-----CCChHHHHHHHHHHHHhCCCeEEEe-ccCChh
Q 029919 93 VDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDP-----RVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (185)
Q Consensus 93 ~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~-----R~SS~~la~ava~gL~s~Gi~V~d~-Gl~pTP 165 (185)
..-||..+...++.+++...+. |. ....|.| +.+ +.-++ =.++++.+|...|++|..+ +..|.|
T Consensus 53 ~ksTp~AA~~aa~~~~~~a~e~-----Gi--~~v~V~v-kG~gg~~~~~pG~-GresairaL~~~Gl~I~~I~DvTpiP 122 (137)
T 3j20_M 53 DEPSPYAAMLAARRAAEEALEK-----GI--VGVHIRV-RAPGGSKSKTPGP-GAQAAIRALARAGLKIGRVEDVTPIP 122 (137)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHH-----TE--EEEEEEE-ECCCSSSCCSCCT-HHHHHHHHHHHHTCEEEEEEECCCCC
T ss_pred ccCCHHHHHHHHHHHHHHHHHc-----CC--eEEEEEE-ECCCCCCCcCCCC-cHHHHHHHHHhCCCEEEEEEEcCCCC
Confidence 4679999999999999888765 21 1122333 332 22222 3667788999999999887 777766
No 36
>3u5c_O RP59A, 40S ribosomal protein S14-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_K 3o30_H 3o2z_H 3u5g_O 1s1h_K 3jyv_K*
Probab=32.17 E-value=66 Score=24.59 Aligned_cols=64 Identities=22% Similarity=0.313 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEE----ecCCCChHHHHHHHHHHHHhCCCeEEEe-ccCChh
Q 029919 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLG----KDPRVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (185)
Q Consensus 94 dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVG----rD~R~SS~~la~ava~gL~s~Gi~V~d~-Gl~pTP 165 (185)
+-||..+...++.+++...+. |. ....|.|= .-+.--++ =.++++.+|...|++|..+ +..|.|
T Consensus 54 ksTpyAAq~aa~~~a~~a~e~-----Gi--~~v~V~vra~gg~~~kgpG~-Gr~sairaL~~~Gl~I~~I~DvTpiP 122 (137)
T 3u5c_O 54 ESSPYAAMLAAQDVAAKCKEV-----GI--TAVHVKIRATGGTRTKTPGP-GGQAALRALARSGLRIGRIEDVTPVP 122 (137)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH-----TC--CEEECEEECSCTTSCCSCCG-GGHHHHHHHHTTTCEECCCEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHc-----CC--eEEEEEEeccCCCcccCCCc-chHHHHHHHHhCCCEEEEEEEcCCCC
Confidence 588999999999999887765 31 12234441 11122222 2567788999999999876 666666
No 37
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=31.68 E-value=68 Score=22.41 Aligned_cols=40 Identities=10% Similarity=-0.018 Sum_probs=31.6
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCChh
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTP 165 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pTP 165 (185)
.+|+|+.|....|....+..+.-....|.++..+-..+.+
T Consensus 7 ~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~ 46 (150)
T 3tnj_A 7 HHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDNI 46 (150)
T ss_dssp SEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEEC--
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEEcCc
Confidence 5799999999999988888888777778888877655543
No 38
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=31.46 E-value=69 Score=22.84 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=26.4
Q ss_pred eEEEEecCC-CChHHHHHHHHHHHHhCCCeEEEecc
Q 029919 127 KVSLGKDPR-VSGPSLSVAVFAGLARAGCLVFDMGL 161 (185)
Q Consensus 127 ~VvVGrD~R-~SS~~la~ava~gL~s~Gi~V~d~Gl 161 (185)
+|+|-|.++ -+++.+++.++++|.+.|++|..+.+
T Consensus 3 ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 38 (148)
T 3f6r_A 3 KVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNA 38 (148)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEET
T ss_pred eEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEeh
Confidence 466777765 35789999999999999987654433
No 39
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=30.73 E-value=1.6e+02 Score=24.40 Aligned_cols=55 Identities=16% Similarity=0.136 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCC-ChHHHHHHHHHHHHhCCCeEEEecc
Q 029919 98 SAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRV-SGPSLSVAVFAGLARAGCLVFDMGL 161 (185)
Q Consensus 98 ~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~-SS~~la~ava~gL~s~Gi~V~d~Gl 161 (185)
+.+..+-..+-+|+... ...+|+|.+.++. +.+.+++.++++|...|++|....+
T Consensus 234 ~~~~~~~~~~~~~~~~~---------~~~kv~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~ 289 (402)
T 1e5d_A 234 DQCTFAVQKYVEYAEQK---------PTNKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWC 289 (402)
T ss_dssp HHHHHHHHHHHHHHHCC---------CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCHHHHHHHHHHHhcCC---------CCCcEEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 45666667777777543 1357888887774 4688899999999999977644433
No 40
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.62 E-value=32 Score=25.38 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=26.9
Q ss_pred CeEEEE---ecCCCChHHHHHHHHHHHHhCCCeEEEecc-CChhHHHHhh
Q 029919 126 VKVSLG---KDPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMST 171 (185)
Q Consensus 126 ~~VvVG---rD~R~SS~~la~ava~gL~s~Gi~V~d~Gl-~pTP~l~yav 171 (185)
++|+++ -|.+.-+.. .++..|...|++|+++|. .|...+--++
T Consensus 4 ~~vvla~~~~d~HdiG~~---~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a 50 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGNK---ILDHAFTNAGFNVVNIGVLSPQELFIKAA 50 (137)
T ss_dssp CEEEEEEETTCCCCHHHH---HHHHHHHHTTCEEEEEEEEECHHHHHHHH
T ss_pred CEEEEEeCCCchhHHHHH---HHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 456665 465555544 455678899999999986 4444443333
No 41
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=30.44 E-value=93 Score=24.07 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=29.6
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHhCCCeEEEecc-CChhHHHHhh
Q 029919 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPACFMST 171 (185)
Q Consensus 125 ~~~VvVGr---D~R~SS~~la~ava~gL~s~Gi~V~d~Gl-~pTP~l~yav 171 (185)
.++|+++- |...-|. ..++..|...|++|+++|. +|...+--++
T Consensus 88 ~~~vll~~~~gd~H~iG~---~~va~~l~~~G~~v~~LG~~vp~~~l~~~~ 135 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGK---NLVAMMLESGGFTVYNLGVDIEPGKFVEAV 135 (210)
T ss_dssp CCEEEEEEBTTCCCCHHH---HHHHHHHHHTTCEEEECCSSBCHHHHHHHH
T ss_pred CCEEEEEeCCCcccHHHH---HHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 45788875 5554443 4566678899999999986 4555554444
No 42
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=29.89 E-value=41 Score=23.78 Aligned_cols=29 Identities=10% Similarity=-0.006 Sum_probs=19.2
Q ss_pred EEEecCC-CChHHHHHHHHHHHHhCCCeEE
Q 029919 129 SLGKDPR-VSGPSLSVAVFAGLARAGCLVF 157 (185)
Q Consensus 129 vVGrD~R-~SS~~la~ava~gL~s~Gi~V~ 157 (185)
+|-|.+. -+.+.+++.++++|.+.|++|.
T Consensus 2 ~I~Y~S~tGnT~~iA~~ia~~l~~~g~~v~ 31 (138)
T 5nul_A 2 KIVYWSGTGNTEKMAELIAKGIIESGKDVN 31 (138)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEECCCchHHHHHHHHHHHHHHCCCeEE
Confidence 4445554 3567788888888887776543
No 43
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=29.09 E-value=69 Score=22.09 Aligned_cols=39 Identities=5% Similarity=-0.128 Sum_probs=31.2
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccC-Ch
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLA-TT 164 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~-pT 164 (185)
.+|+|+.|....+....+..+.-....|.++..+-.. +.
T Consensus 5 ~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~ 44 (138)
T 1q77_A 5 KVLLVLTDAYSDCEKAITYAVNFSEKLGAELDILAVLEDV 44 (138)
T ss_dssp EEEEEEESTTCCCHHHHHHHHHHHTTTCCEEEEEEECHHH
T ss_pred cEEEEEccCCHhHHHHHHHHHHHHHHcCCeEEEEEEeccc
Confidence 4799999999999887777676666679998888766 54
No 44
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=28.54 E-value=70 Score=26.00 Aligned_cols=72 Identities=19% Similarity=0.101 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHHHHHH---hhccccCCCCCCCCeEEEEe---cCCCChHHHHHHHHHHHHhCCCeEEEecc-CChhH
Q 029919 94 DLTPSAVEAIAESFGEWVI---RSLENERGRPVEDVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGL-ATTPA 166 (185)
Q Consensus 94 dLTp~~v~~Ig~A~a~~l~---~~~~~~~g~~~~~~~VvVGr---D~R~SS~~la~ava~gL~s~Gi~V~d~Gl-~pTP~ 166 (185)
+++...+...+..+-+.+. ...... ....++|+++- |...-|. ..++..|...|++|+++|. +|...
T Consensus 92 ~~~v~~~~~~~~~~~~~l~~l~~~~~~~---~~~~~~vlla~~~gd~HdiG~---~iva~~L~~~G~~Vi~LG~~vp~e~ 165 (258)
T 2i2x_B 92 VIFLPNVMMSADAMLEGIEYCKENSGAT---PKTKGTVVCHVAEGDVHDIGK---NIVTALLRANGYNVVDLGRDVPAEE 165 (258)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHTTTSSC---CCCSCEEEEEECTTCCCCHHH---HHHHHHHHHTTCEEEEEEEECCSHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhccc---cCCCCeEEEEeCCCCccHHHH---HHHHHHHHHCCCEEEECCCCCCHHH
Confidence 4666665555554444332 221100 01346788875 5555554 4456678999999999985 55555
Q ss_pred HHHhh
Q 029919 167 CFMST 171 (185)
Q Consensus 167 l~yav 171 (185)
+--++
T Consensus 166 l~~~~ 170 (258)
T 2i2x_B 166 VLAAV 170 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54444
No 45
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=28.45 E-value=2.5e+02 Score=23.49 Aligned_cols=87 Identities=10% Similarity=0.113 Sum_probs=54.9
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++.-|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-----------rvpViaGvg~~st~e 106 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG-----------RIPVIAGTGANSTRE 106 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-----------SSCEEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEeCCCcCHHH
Confidence 344555656655444445789999888877776789999888888777776431 234666644333333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 107 --ai~la~~A~~~Gadavlv 124 (314)
T 3qze_A 107 --AVALTEAAKSGGADACLL 124 (314)
T ss_dssp --HHHHHHHHHHTTCSEEEE
T ss_pred --HHHHHHHHHHcCCCEEEE
Confidence 233456667778886554
No 46
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=28.12 E-value=92 Score=22.30 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=27.2
Q ss_pred eEEEEecCC-CChHHHHHHHHHHHHhCCCeEEEec
Q 029919 127 KVSLGKDPR-VSGPSLSVAVFAGLARAGCLVFDMG 160 (185)
Q Consensus 127 ~VvVGrD~R-~SS~~la~ava~gL~s~Gi~V~d~G 160 (185)
+|+|-|.+. -+++.+++.+++.|...|++|..+.
T Consensus 3 ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 3 DITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp SEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 466777766 5789999999999999998876553
No 47
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.50 E-value=45 Score=25.30 Aligned_cols=44 Identities=32% Similarity=0.329 Sum_probs=29.7
Q ss_pred CCeEEEEe---cCCCChHHHHHHHHHHHHhCCCeEEEeccC-ChhHHHHhh
Q 029919 125 DVKVSLGK---DPRVSGPSLSVAVFAGLARAGCLVFDMGLA-TTPACFMST 171 (185)
Q Consensus 125 ~~~VvVGr---D~R~SS~~la~ava~gL~s~Gi~V~d~Gl~-pTP~l~yav 171 (185)
+++|+++- |.+.-+..+ ++..|...|++|+++|.- |...+--++
T Consensus 18 ~~~vlla~~~gd~HdiG~~~---va~~l~~~G~eVi~lG~~~p~e~lv~aa 65 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKV---VARALRDAGFEVVYTGLRQTPEQVAMAA 65 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHH---HHHHHHHTTCEEECCCSBCCHHHHHHHH
T ss_pred CCEEEEEeCCCCccHHHHHH---HHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 46787764 777766555 455688899999999864 444444444
No 48
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=27.35 E-value=91 Score=21.46 Aligned_cols=37 Identities=11% Similarity=0.019 Sum_probs=29.0
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccC
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLA 162 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~ 162 (185)
.+|+|+.|....+....+..+.-....|.++..+-..
T Consensus 3 ~~ILv~~D~s~~s~~al~~a~~la~~~~a~l~ll~v~ 39 (141)
T 1jmv_A 3 KHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVD 39 (141)
T ss_dssp SEEEEEECCSTTHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred ceEEEEecCchhhHHHHHHHHHHHHhcCCEEEEEEEe
Confidence 4799999999999887777776666678888776554
No 49
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=27.29 E-value=2.8e+02 Score=23.26 Aligned_cols=87 Identities=21% Similarity=0.218 Sum_probs=55.0
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++.-|.+|+...||.+.-.++.+...+.... +..|++|--.-.+.+
T Consensus 37 dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-----------rvpViaGvg~~st~~ 105 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK-----------RVPVVAGAGSNSTSE 105 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------SSCBEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC-----------CCcEEEeCCCCCHHH
Confidence 344555666655444446899999988888876789999888887777765432 234666644333333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
. ..+++-..+.|++.+.+
T Consensus 106 a--i~la~~A~~~Gadavlv 123 (315)
T 3si9_A 106 A--VELAKHAEKAGADAVLV 123 (315)
T ss_dssp H--HHHHHHHHHTTCSEEEE
T ss_pred H--HHHHHHHHhcCCCEEEE
Confidence 2 33455667778876553
No 50
>3ckm_A YRAM (HI1655), LPOA; periplasmic-binding protein, lipoprotein, unliganded, biosynthetic protein; 1.35A {Haemophilus influenzae} SCOP: c.93.1.1
Probab=26.99 E-value=75 Score=25.71 Aligned_cols=53 Identities=15% Similarity=0.062 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEe
Q 029919 95 LTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 95 LTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~ 159 (185)
++++. -+.++++|+.+. + .++++|-++.-..|..+++++.+.+.+.|.+|...
T Consensus 106 ~~~~~---~~~~~a~~~~~~-----g----~k~~~ii~~~~~yg~~~~~~f~~~~~~~Gg~vv~~ 158 (327)
T 3ckm_A 106 LSPED---EAESAANKMWND-----G----VRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANI 158 (327)
T ss_dssp CCHHH---HHHHHHHHHHHT-----T----CCSCEEEEESSHHHHHHHHHHHHHHHHHHSSCCEE
T ss_pred cChHH---HHHHHHHHHHhc-----C----CeeEEEEecCChHHHHHHHHHHHHHHHCCCeEEEE
Confidence 45544 355677777664 2 24577777777899999999999999999998664
No 51
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=26.64 E-value=2.7e+02 Score=22.97 Aligned_cols=86 Identities=19% Similarity=0.112 Sum_probs=54.6
Q ss_pred ccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHH
Q 029919 62 VVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSL 141 (185)
Q Consensus 62 ~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~l 141 (185)
-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... .+..|++|-=.-.+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g----------~rvpviaGvg~~~t~~-- 91 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKG----------TKVKVLAGAGSNATHE-- 91 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT----------SSCEEEEECCCSSHHH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC----------CCCeEEEeCCCCCHHH--
Confidence 3455555554444445799999888888876789999888887777776532 0245777643332333
Q ss_pred HHHHHHHHHhCCCeEEEe
Q 029919 142 SVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 142 a~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 92 ai~la~~a~~~Gadavlv 109 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILS 109 (301)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 334456677788886654
No 52
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=26.61 E-value=50 Score=22.94 Aligned_cols=41 Identities=5% Similarity=-0.058 Sum_probs=33.0
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCChhH
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATTPA 166 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pTP~ 166 (185)
.+|+|+.|....|....+..+.-....|.++..+...+.|.
T Consensus 3 ~~ILv~vD~s~~s~~al~~A~~la~~~~a~l~ll~v~~~~~ 43 (147)
T 3hgm_A 3 NRIMVPVDGSKGAVKALEKGVGLQQLTGAELYILCVFKHHS 43 (147)
T ss_dssp SEEEEECCSBHHHHHHHHHHHHHHHHHCCEEEEEEEECCHH
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCcc
Confidence 47999999998888888777776677799988887766665
No 53
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=26.28 E-value=1.6e+02 Score=23.58 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEE
Q 029919 101 EAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFD 158 (185)
Q Consensus 101 ~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d 158 (185)
...+.++++|+.+. + ..+|.+-++....+....+.+.+.|...|++|..
T Consensus 124 ~~~~~~~~~~l~~~-----g----~~~ia~i~~~~~~g~~~~~~~~~~l~~~g~~v~~ 172 (368)
T 4eyg_A 124 AQSSIIIGDWAAKN-----G----IKKVATLTSDYAPGNDALAFFKERFTAGGGEIVE 172 (368)
T ss_dssp HHHHHHHHHHHHHT-----T----CCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHc-----C----CCEEEEEecCchHhHHHHHHHHHHHHHcCCEEEE
Confidence 34566788888764 2 2466555566667888899999999999998764
No 54
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=25.95 E-value=2.7e+02 Score=23.17 Aligned_cols=85 Identities=11% Similarity=0.004 Sum_probs=56.2
Q ss_pred cccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHH
Q 029919 61 EVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPS 140 (185)
Q Consensus 61 ~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~ 140 (185)
+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.=.++.+...+.... +..|++|--. .+ .
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g-----------rvpViaGvg~-~t--~ 93 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG-----------RALVVAGIGY-AT--S 93 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-----------SSEEEEEECS-SH--H
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-----------CCcEEEEeCc-CH--H
Confidence 34555666655444445789999988877776789999888887777776431 2468888643 22 2
Q ss_pred HHHHHHHHHHhCCCeEEEe
Q 029919 141 LSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 141 la~ava~gL~s~Gi~V~d~ 159 (185)
=+..+++-..+.|++.+.+
T Consensus 94 ~ai~la~~A~~~Gadavlv 112 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMI 112 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHhcCCCEEEE
Confidence 2334566677789887654
No 55
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=25.86 E-value=2.7e+02 Score=22.77 Aligned_cols=87 Identities=7% Similarity=0.092 Sum_probs=53.8
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++.-|.+|+...||.+.-.++.+...+.... +..|++|--.-.+.+
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-----------r~pviaGvg~~~t~~ 84 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK-----------RIPIIAGTGANSTRE 84 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------SSCEEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-----------CCeEEEeCCCCCHHH
Confidence 344555556655444446789999888877776689999888877777765532 234666644333333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
.+ .+++-..+.|++.+.+
T Consensus 85 ai--~la~~a~~~Gadavlv 102 (291)
T 3tak_A 85 AI--ELTKAAKDLGADAALL 102 (291)
T ss_dssp HH--HHHHHHHHHTCSEEEE
T ss_pred HH--HHHHHHHhcCCCEEEE
Confidence 32 3345566677776543
No 56
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=25.75 E-value=2.8e+02 Score=22.84 Aligned_cols=87 Identities=16% Similarity=0.192 Sum_probs=55.0
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-----------rvpviaGvg~~~t~~ 90 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK-----------RVPVIAGTGANNTVE 90 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------SSCEEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-----------CCcEEEeCCCcCHHH
Confidence 344555666655444446789999888888876789999888887777776532 234666643333333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
. ..+++-..+.|++.+.+
T Consensus 91 a--i~la~~a~~~Gadavlv 108 (297)
T 3flu_A 91 A--IALSQAAEKAGADYTLS 108 (297)
T ss_dssp H--HHHHHHHHHTTCSEEEE
T ss_pred H--HHHHHHHHHcCCCEEEE
Confidence 2 33455567778876553
No 57
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=25.56 E-value=2.6e+02 Score=23.36 Aligned_cols=86 Identities=13% Similarity=0.090 Sum_probs=57.0
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=. .+.+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-----------rvpViaGvg~-st~~ 94 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-----------RATVVAGIGY-SVDT 94 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-----------SSEEEEEECS-SHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-----------CCeEEecCCc-CHHH
Confidence 344555656655444445789999887877766679999888887777765431 2468777655 4443
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
. ..+++-..+.|++.+.+
T Consensus 95 a--i~la~~A~~~Gadavlv 112 (314)
T 3d0c_A 95 A--IELGKSAIDSGADCVMI 112 (314)
T ss_dssp H--HHHHHHHHHTTCSEEEE
T ss_pred H--HHHHHHHHHcCCCEEEE
Confidence 3 34566678889997654
No 58
>4edg_A DNA primase; catalytic domain, nucleoside triphosphate, nucleoside polyph protein-ligand complex, transferase; HET: DNA ATP; 2.00A {Staphylococcus aureus} PDB: 4e2k_A* 4edk_A* 4edr_A* 4edt_A* 4edv_A* 4ee1_A*
Probab=25.42 E-value=1.6e+02 Score=25.23 Aligned_cols=71 Identities=21% Similarity=0.240 Sum_probs=49.0
Q ss_pred chhhHHHhhhccccccee-eeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHH
Q 029919 64 VDEEMDRIRRLQNGSDVR-GVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLS 142 (185)
Q Consensus 64 ~~~~~~~~~~LF~gsGIR-Gi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la 142 (185)
.|..||.+.-. ..|+. .++.-| ..+|++.+..|-. . . .+|++.+|.-..|...+
T Consensus 158 vEG~~Dvial~--q~Gi~naVA~lG-----Talt~~~~~~L~r--------~-----~-----~~Vil~~D~D~AG~~Aa 212 (329)
T 4edg_A 158 LEGFMDVIKSD--TAGLKNVVATMG-----TQLSDEHITFIRK--------L-----T-----SNITLMFDGDFAGSEAT 212 (329)
T ss_dssp ESCHHHHHHHH--HHTCCSEEECSS-----SCCCHHHHHHHHH--------H-----C-----SEEEECCCSSHHHHHHH
T ss_pred EecHHHHHHHH--HcCCCeEEECCc-----cCCCHHHHHHHHh--------c-----C-----CeEEEEeCCCHHHHHHH
Confidence 44445554322 25676 444433 3788887665322 1 1 36999999999999999
Q ss_pred HHHHHHHHhCCCeEEEe
Q 029919 143 VAVFAGLARAGCLVFDM 159 (185)
Q Consensus 143 ~ava~gL~s~Gi~V~d~ 159 (185)
.-+++.|...|++|..+
T Consensus 213 ~r~~~~l~~~g~~v~v~ 229 (329)
T 4edg_A 213 LKTGQHLLQQGLNVFVI 229 (329)
T ss_dssp HHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhcCCeEEEE
Confidence 99999999999998764
No 59
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=25.18 E-value=1.6e+02 Score=23.70 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEE
Q 029919 102 AIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFD 158 (185)
Q Consensus 102 ~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d 158 (185)
..+.++++|+.+. + ..+|.+-++.-..+....+.+.+.|...|.+|..
T Consensus 126 ~~~~~~~~~l~~~-----g----~~~vaii~~~~~~g~~~~~~~~~~~~~~G~~v~~ 173 (375)
T 3i09_A 126 ALAKGTGSAVVKQ-----G----GKTWFFLTADYAFGKALEKNTADVVKANGGKVLG 173 (375)
T ss_dssp HHHHHHHHHHHHT-----T----CCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHc-----C----CceEEEEecccHHHHHHHHHHHHHHHHcCCEEee
Confidence 4566788888764 2 2466665666677889999999999999999864
No 60
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=25.03 E-value=2e+02 Score=21.05 Aligned_cols=60 Identities=23% Similarity=0.339 Sum_probs=39.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEe-ccCChh
Q 029919 94 DLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM-GLATTP 165 (185)
Q Consensus 94 dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~-Gl~pTP 165 (185)
.-||..+...++.+++...+. |. ....|.| +..-.. .+++..+|...|++|..+ +..|.|
T Consensus 45 k~tp~AA~~aa~~~~~~~~~~-----Gi--~~v~v~v-kG~G~G----r~~airaL~~~Gl~I~~I~DvTpip 105 (117)
T 3r8n_K 45 KSTPFAAQVAAERCADAVKEY-----GI--KNLEVMV-KGPGPG----RESTIRALNAAGFRITNITDVTPIP 105 (117)
T ss_dssp GSSHHHHHHHHHHHHHHHTTS-----CC--CEEEEEE-ECSSSS----TTHHHHHHHHTTCEEEEEEECCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHh-----CC--cEEEEEE-eCCCcc----HHHHHHHHHhCCCEEEEEEEeCCCC
Confidence 578999999888888877654 31 1223433 433322 345677888999999877 666665
No 61
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=24.88 E-value=1.7e+02 Score=23.01 Aligned_cols=49 Identities=8% Similarity=-0.067 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEE
Q 029919 101 EAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFD 158 (185)
Q Consensus 101 ~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d 158 (185)
...+.++++|+.+. | ..+|.+-++....+....+.+.+.|...|++|..
T Consensus 120 ~~~~~~~~~~l~~~-----g----~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~ 168 (362)
T 3snr_A 120 PIMGKVLYEHMKKN-----N----VKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVG 168 (362)
T ss_dssp HHHHHHHHHHHHHT-----T----CCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhc-----C----CCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEE
Confidence 34566777888754 2 2456555666667888999999999999999754
No 62
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=24.53 E-value=1.6e+02 Score=24.34 Aligned_cols=54 Identities=22% Similarity=0.203 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCC-CChHHHHHHHHHHHHhCCCeEEEeccC
Q 029919 100 VEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPR-VSGPSLSVAVFAGLARAGCLVFDMGLA 162 (185)
Q Consensus 100 v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R-~SS~~la~ava~gL~s~Gi~V~d~Gl~ 162 (185)
..++-..+-+|.... ...+|+|.|.+. -+.+.++++++++|.+.|++|..+.+.
T Consensus 240 ~~~~~~~~~~~~~~~---------~~~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~ 294 (404)
T 2ohh_A 240 PMKIIEAYTGWATGM---------VDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLH 294 (404)
T ss_dssp HHHHHHHHHHHHTTC---------CCSEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred HHHHHHHHHHHhccC---------CCCcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 444555566665311 135788877776 457899999999999999877554433
No 63
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=24.43 E-value=3e+02 Score=22.75 Aligned_cols=87 Identities=15% Similarity=0.147 Sum_probs=53.4
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-----------rvpViaGvg~~~t~~ 94 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG-----------KIKLIAHVGCVSTAE 94 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------TSEEEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEecCCCCHHH
Confidence 344555656655444445789999887877776679999888877777765431 235666643322222
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 95 --ai~la~~A~~~Gadavlv 112 (303)
T 2wkj_A 95 --SQQLAASAKRYGFDAVSA 112 (303)
T ss_dssp --HHHHHHHHHHHTCSEEEE
T ss_pred --HHHHHHHHHhCCCCEEEe
Confidence 233455566678775543
No 64
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=24.00 E-value=1.8e+02 Score=23.25 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEE
Q 029919 102 AIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFD 158 (185)
Q Consensus 102 ~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d 158 (185)
..+.++++|+.+. + ..+|.+-++.-..+....+.+.+.|...|++|..
T Consensus 137 ~~~~~~~~~l~~~-----g----~~~ia~i~~~~~~~~~~~~~~~~~l~~~G~~v~~ 184 (375)
T 4evq_A 137 QIGRATGDAMIKA-----G----LKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVVK 184 (375)
T ss_dssp HHHHHHHHHHHHT-----T----CCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHc-----C----CcEEEEEecCchHHHHHHHHHHHHHHHcCCeEEE
Confidence 4566788888765 2 2466555555667888899999999999999854
No 65
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=23.93 E-value=3.1e+02 Score=22.71 Aligned_cols=86 Identities=14% Similarity=0.109 Sum_probs=53.6
Q ss_pred cccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHH
Q 029919 61 EVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPS 140 (185)
Q Consensus 61 ~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~ 140 (185)
+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+... ++..|++|--.-.+.+
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-----------gr~pviaGvg~~~t~~- 97 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-----------KNRLLLAGSGCESTQA- 97 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-----------TTSEEEEECCCSSHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-----------CCCcEEEecCCCCHHH-
Confidence 3445555555444444678999988887776667999987777766555421 1245777653333333
Q ss_pred HHHHHHHHHHhCCCeEEEe
Q 029919 141 LSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 141 la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 98 -ai~la~~A~~~Gadavlv 115 (307)
T 3s5o_A 98 -TVEMTVSMAQVGADAAMV 115 (307)
T ss_dssp -HHHHHHHHHHTTCSEEEE
T ss_pred -HHHHHHHHHHcCCCEEEE
Confidence 334566677889886654
No 66
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=23.48 E-value=1.7e+02 Score=24.19 Aligned_cols=53 Identities=25% Similarity=0.378 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCC-ChHHHHHHHHHHHHhCCCeEEEecc
Q 029919 100 VEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRV-SGPSLSVAVFAGLARAGCLVFDMGL 161 (185)
Q Consensus 100 v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~-SS~~la~ava~gL~s~Gi~V~d~Gl 161 (185)
+..+-..+-+|.... ...+++|.|.+.. +.+.++++++++|.+.|++|..+.+
T Consensus 235 ~~~~l~~~~~~~~~~---------~~~~i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~ 288 (398)
T 1ycg_A 235 PGRIIEAYARWAEGQ---------GKAKAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKL 288 (398)
T ss_dssp HHHHHHHHHHHHHTC---------CCSEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHHHHHHHhccC---------CcCeEEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 344445566665532 1257888888874 4688999999999999987654433
No 67
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=23.28 E-value=52 Score=22.90 Aligned_cols=39 Identities=5% Similarity=-0.038 Sum_probs=29.8
Q ss_pred CeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEeccCCh
Q 029919 126 VKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDMGLATT 164 (185)
Q Consensus 126 ~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~Gl~pT 164 (185)
.+|+|+.|....+....+..+.-....|.++..+-..+.
T Consensus 6 ~~ILv~~D~s~~s~~al~~A~~la~~~~a~l~ll~v~~~ 44 (146)
T 3s3t_A 6 TNILVPVDSSDAAQAAFTEAVNIAQRHQANLTALYVVDD 44 (146)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEEEEC
T ss_pred ceEEEEcCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecC
Confidence 579999999988888877777766667888877654433
No 68
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=22.23 E-value=1.6e+02 Score=23.84 Aligned_cols=48 Identities=15% Similarity=0.102 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEE
Q 029919 102 AIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFD 158 (185)
Q Consensus 102 ~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d 158 (185)
..+.++++|+.+. + ..+|.+-++.-..+..+.+.+.+.|...|.+|..
T Consensus 128 ~~~~~~~~~l~~~-----g----~~~vaii~~~~~~g~~~~~~~~~~~~~~G~~v~~ 175 (379)
T 3n0w_A 128 SIVKTVVQAQLAK-----G----YKTWFLMLPDAAYGDLMNAAIRRELTAGGGQIVG 175 (379)
T ss_dssp HHHHHHHHHHHHT-----T----CCEEEEEEESSHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHc-----C----CcEEEEEecccchhHHHHHHHHHHHHHcCCEEEE
Confidence 4566788888764 2 2466666676778889999999999999999865
No 69
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=22.20 E-value=3.4e+02 Score=23.04 Aligned_cols=87 Identities=17% Similarity=0.111 Sum_probs=54.0
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-----------rvpViaGvg~~st~e 114 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-----------RVPVLIGTGGTNARE 114 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------SSCEEEECCSSCHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEecCCCCHHH
Confidence 344556666655444445789999887877766679999888877777765431 234777643332333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
. ..+++-..+.|++.+.+
T Consensus 115 a--i~la~~A~~~Gadavlv 132 (343)
T 2v9d_A 115 T--IELSQHAQQAGADGIVV 132 (343)
T ss_dssp H--HHHHHHHHHHTCSEEEE
T ss_pred H--HHHHHHHHhcCCCEEEE
Confidence 2 23455566778876543
No 70
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=22.02 E-value=75 Score=21.92 Aligned_cols=40 Identities=8% Similarity=-0.106 Sum_probs=29.9
Q ss_pred CeEEEEecCCCC--hHHHHHHHHHHHHhCCCeEEEeccCChh
Q 029919 126 VKVSLGKDPRVS--GPSLSVAVFAGLARAGCLVFDMGLATTP 165 (185)
Q Consensus 126 ~~VvVGrD~R~S--S~~la~ava~gL~s~Gi~V~d~Gl~pTP 165 (185)
++|+|+.|.... +....+..+.-....|.++..+-..+.+
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~la~~~~a~l~ll~v~~~~ 43 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVESEARIDDAEVHFLTVIPSL 43 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHHHHHHHTCEEEEEEEECC-
T ss_pred CEEEEEecCChHhhHHHHHHHHHHHHHhcCCeEEEEEEecCC
Confidence 479999999988 8777777666666778888777655544
No 71
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=21.85 E-value=84 Score=24.39 Aligned_cols=32 Identities=3% Similarity=-0.167 Sum_probs=26.4
Q ss_pred CeEEEEecCC-CChHHHHHHHHHHHHhCCCeEE
Q 029919 126 VKVSLGKDPR-VSGPSLSVAVFAGLARAGCLVF 157 (185)
Q Consensus 126 ~~VvVGrD~R-~SS~~la~ava~gL~s~Gi~V~ 157 (185)
.+|+|-|.+. -+.+.+++.+++.|...|++|.
T Consensus 22 ~kv~IvY~S~tGnTe~~A~~ia~~l~~~g~~v~ 54 (191)
T 1bvy_F 22 TPLLVLYGSNMGTAEGTARDLADIAMSKGFAPQ 54 (191)
T ss_dssp CCEEEEEECSSSHHHHHHHHHHHHHHTTTCCCE
T ss_pred CeEEEEEECCChHHHHHHHHHHHHHHhCCCceE
Confidence 5688888887 4678999999999999887653
No 72
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=21.82 E-value=2e+02 Score=23.36 Aligned_cols=48 Identities=15% Similarity=0.100 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHHHHHHHHHHHHhCCCeEEEe
Q 029919 103 IAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 103 Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~ 159 (185)
.+.+++.|+.+. + ..+|.|-++.-..+..+.+++.+.+...|.+|+.-
T Consensus 126 ~~~~~~~~~~~~-----g----~k~vaii~~~~~~g~~~~~~~~~~~~~~g~~vv~~ 173 (371)
T 4f06_A 126 NTVPAAKVAKQK-----G----ATKVAIAVSDYGPGIDAETAFKKTFEAEGGKVVEA 173 (371)
T ss_dssp HHHHHHHHHHHT-----T----CCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhhhhhhhc-----C----ceEEEEEcCCcccchhHHHHHHHHHHhcCCceEEE
Confidence 445667777654 2 25777767777789999999999999999998754
No 73
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=21.66 E-value=83 Score=26.29 Aligned_cols=32 Identities=22% Similarity=0.193 Sum_probs=24.0
Q ss_pred EEEEe-cCCCChHHHHHHHHHHHHhCCCeEEEe
Q 029919 128 VSLGK-DPRVSGPSLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 128 VvVGr-D~R~SS~~la~ava~gL~s~Gi~V~d~ 159 (185)
|+.|| +.+..+..+++.++++|.+.|.+|...
T Consensus 27 II~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 27 LIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp EEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 55566 444456889999999999999887544
No 74
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=21.27 E-value=3.9e+02 Score=23.12 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=55.7
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++.-|.+|+...||.+.=.++.+...+... + +..|++|-=.-.+.+
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~-------g----rvpViaGvg~~st~e 142 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-------G----SIKVIGNTGSNSTRE 142 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------T----TSEEEEECCCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhC-------C----CCeEEEecCCCCHHH
Confidence 34455565665544444678999988888887678999988777776666543 1 245777753333333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 143 --ai~la~~A~~~Gadavlv 160 (360)
T 4dpp_A 143 --AIHATEQGFAVGMHAALH 160 (360)
T ss_dssp --HHHHHHHHHHTTCSEEEE
T ss_pred --HHHHHHHHHHcCCCEEEE
Confidence 334456677789886653
No 75
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=21.17 E-value=2.1e+02 Score=21.05 Aligned_cols=34 Identities=9% Similarity=0.005 Sum_probs=25.4
Q ss_pred eEEEEecCC-CChHHHHHHHHHHHHhCCCeEEEec
Q 029919 127 KVSLGKDPR-VSGPSLSVAVFAGLARAGCLVFDMG 160 (185)
Q Consensus 127 ~VvVGrD~R-~SS~~la~ava~gL~s~Gi~V~d~G 160 (185)
+|+|-+.++ -+++.++++++++|.+.|++|..+.
T Consensus 7 kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~ 41 (200)
T 2a5l_A 7 YILVLYYSRHGATAEMARQIARGVEQGGFEARVRT 41 (200)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEB
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEE
Confidence 466656555 3578999999999999998875443
No 76
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=21.05 E-value=3.5e+02 Score=22.62 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=54.6
Q ss_pred cccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHH
Q 029919 61 EVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPS 140 (185)
Q Consensus 61 ~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~ 140 (185)
+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.=.++.+...+.... +..|++|--.-.+.+
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-----------rvpviaGvg~~~t~~- 94 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP-----------DFPIMAGVGAHSTRQ- 94 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT-----------TSCEEEECCCSSHHH-
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEeCCCCCHHH-
Confidence 34555556655444445789999888877766679999888877777665421 245777754433333
Q ss_pred HHHHHHHHHHhCCCeEEEe
Q 029919 141 LSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 141 la~ava~gL~s~Gi~V~d~ 159 (185)
+..+++-..+.|++.+.+
T Consensus 95 -ai~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 95 -VLEHINDASVAGANYVLV 112 (318)
T ss_dssp -HHHHHHHHHHHTCSEEEE
T ss_pred -HHHHHHHHHHcCCCEEEE
Confidence 334455667778886654
No 77
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=21.02 E-value=3.1e+02 Score=23.08 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=54.9
Q ss_pred ccccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChH
Q 029919 60 NEVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGP 139 (185)
Q Consensus 60 ~~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~ 139 (185)
|+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.-.++.+...+.... +..|++|-=.-.+.+
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-----------rvpViaGvg~~st~e 117 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-----------RRTLMAGIGALRTDE 117 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-----------SSEEEEEECCSSHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----------CCcEEEecCCCCHHH
Confidence 345566666655444445789999887877776679999888887777765431 245777654433333
Q ss_pred HHHHHHHHHHHhCCCeEEEe
Q 029919 140 SLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 140 ~la~ava~gL~s~Gi~V~d~ 159 (185)
.+ .+++-..+.|++.+.+
T Consensus 118 ai--~la~~A~~~Gadavlv 135 (332)
T 2r8w_A 118 AV--ALAKDAEAAGADALLL 135 (332)
T ss_dssp HH--HHHHHHHHHTCSEEEE
T ss_pred HH--HHHHHHHhcCCCEEEE
Confidence 32 3455566778886543
No 78
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=20.61 E-value=1.2e+02 Score=22.65 Aligned_cols=33 Identities=18% Similarity=-0.093 Sum_probs=24.9
Q ss_pred eEEEEecCCCChHHHHHHHHHHHHhCCCeEEEe
Q 029919 127 KVSLGKDPRVSGPSLSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 127 ~VvVGrD~R~SS~~la~ava~gL~s~Gi~V~d~ 159 (185)
+|+|-+.+.-+++.++++++++|.+.|++|..+
T Consensus 6 kilii~~S~g~T~~la~~i~~~l~~~g~~v~~~ 38 (199)
T 2zki_A 6 NILVLFYGYGSIVELAKEIGKGAEEAGAEVKIR 38 (199)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred EEEEEEeCccHHHHHHHHHHHHHHhCCCEEEEE
Confidence 455555555567899999999999999886544
No 79
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=20.26 E-value=3.6e+02 Score=22.38 Aligned_cols=85 Identities=20% Similarity=0.209 Sum_probs=54.1
Q ss_pred cccchhhHHHhhhcccccceeeeeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCCCCCeEEEEecCCCChHH
Q 029919 61 EVVVDEEMDRIRRLQNGSDVRGVALEGEKGRTVDLTPSAVEAIAESFGEWVIRSLENERGRPVEDVKVSLGKDPRVSGPS 140 (185)
Q Consensus 61 ~~~~~~~~~~~~~LF~gsGIRGi~~eG~~g~~~dLTp~~v~~Ig~A~a~~l~~~~~~~~g~~~~~~~VvVGrD~R~SS~~ 140 (185)
+-+..+.+.++-+..-..|+.|++--|.+|+...||.+.=.++.+...+.. .+ ..|++|-=.-.+.+.
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-gr-----------vpViaGvg~~~t~~a 91 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KS-----------MQVIVGVSAPGFAAM 91 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TT-----------SEEEEECCCSSHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CC-----------CcEEEecCCCCHHHH
Confidence 344555566554444457899998888777766899998888777766654 21 357777533333333
Q ss_pred HHHHHHHHHHhCCCeEEEe
Q 029919 141 LSVAVFAGLARAGCLVFDM 159 (185)
Q Consensus 141 la~ava~gL~s~Gi~V~d~ 159 (185)
+ .+++-..+.|++.+.+
T Consensus 92 i--~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 92 R--RLARLSMDAGAAGVMI 108 (313)
T ss_dssp H--HHHHHHHHHTCSEEEE
T ss_pred H--HHHHHHHHcCCCEEEE
Confidence 3 3456667778886654
Done!