BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029923
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 3 KCELCGS-PAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLTP 54
+C+ CG+ A ++C+SD A LC +CD VH AN L H+R+LLC C SL P
Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKC-SLQP 55
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana
GN=COL3 PE=1 SV=1
Length = 294
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 2 KKCELCGS-PAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQ 50
+ C+ C S A +FC +D A LC DCD K+H AN L + H R LC VC+
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCE 55
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 4 CELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLTP-WNGSGPK 61
CE+C +PA + C++D A+LC CD +H AN L H R +TP ++ GP
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV-------PITPFYDAVGPA 103
Query: 62 LGPTISVCNVCVGNGSGSTS----REETNRGETYTDDDYDDANEEEDDDDDDDDG 112
+ SV V G + S +E ++D DY +++ +DG
Sbjct: 104 KSASSSVNFVDEDGGDVTASWLLAKEGIEITNLFSDLDYPKIEVTSEENSSGNDG 158
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana
GN=COL4 PE=2 SV=2
Length = 362
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 2 KKCELCGSP-AKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQ 50
K C+ C S A ++C D A LC CD+KVH AN L + H+R +C VC+
Sbjct: 4 KLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCE 53
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 4 CELCGSPAKM-FCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQS 51
C+ CG M +C SD A LC CD VH AN L HSRTL+C C +
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNA 53
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana
GN=COL9 PE=2 SV=1
Length = 372
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 4 CELCGSPAKM-FCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQS 51
C+ CG M +C SD A LC CD VH AN L HSRTL+C C +
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNA 53
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana
GN=COL2 PE=1 SV=1
Length = 347
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 KKCELCGSPA-KMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQS 51
+ C+ C S A ++CE+D A LC CDA+VH AN + + H R +C C+S
Sbjct: 14 RACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCES 64
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 2 KKCELCGS-PAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQS 51
+ CE C + A ++C +D A+LC CDAKVH AN L H RT+LC C++
Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN 62
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 4 CELCG-SPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVC 49
CE CG A +FC +D A LC CD VH AN L H R+ +C C
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 3 KCELCG-SPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQS 51
KC+ C S A ++C+SD A LC +CD VH AN L H R+L+C C S
Sbjct: 4 KCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFS 53
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1
PE=2 SV=1
Length = 395
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 2 KKCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQ 50
+ C+ C +P+ ++C +D A LC CDA+VH AN + + H R +C C+
Sbjct: 33 RPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACE 82
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 2 KKCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVC 49
+ C+ C S A ++C++D A LC CD +VH AN L A H R+LLC C
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSC 59
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 9 SPAKMFCESDQASLCWDCDAKVHGAN 34
SP+ +FCE++++ LC +CD + H A+
Sbjct: 62 SPSSLFCETERSVLCQNCDWQHHTAS 87
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 4 CELCG-SPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVC 49
C+ CG A +FC +D A LC CD +VH AN L H R+ +C C
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC 55
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana
GN=COL1 PE=1 SV=1
Length = 355
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 KKCELCGSPA-KMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQ 50
+ C+ C S A ++C +D A LC CDA+VH AN L + H R +C C+
Sbjct: 10 QACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCE 59
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 1 MKKCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHV 48
++ C+ C +PA FC++D ASLC CD+++H AN L H R + +
Sbjct: 52 VRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPI 100
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 2 KKCELCGSPA-KMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQ 50
+ C+ C S A ++C +D A LC CDA+VH AN + + H R +C C+
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCE 67
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1 MKKCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHV 48
++ CE C +PA CE+D ASLC CD++VH AN L H R + +
Sbjct: 60 VRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPI 108
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 3 KCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLL---------CHVCQ 50
+C +C + A + C +D+A+LCW CD K+H AN L H R L C +CQ
Sbjct: 4 QCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQ 61
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 1 MKKCELCGSPAKMF-CESDQASLCWDCDAKVHGANFLVANHSRTLL 45
+ KC++C + F C D+A LC CD +H N V+ H R LL
Sbjct: 54 IPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLL 99
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 3 KCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLL 45
+C++C +PA + C +D+A+LC CD +VH AN L + H R L
Sbjct: 4 QCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFL 47
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 4 CELCGSPAK-MFCESDQASLCWDCDAKVHGANFLVANHSRTL 44
C++C A +FC D+A LC DCD H N ANH R L
Sbjct: 57 CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFL 98
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 4 CELCG-SPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLT 53
C++C A +FC+ D+A LC DCD+ +H AN H R LL V S T
Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSAT 110
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 3 KCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLTPWNGSGPK 61
+C++C A +FC +D+ASLC CD +VH AN L + H R L + S N S P
Sbjct: 4 RCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSS----NTSSP- 58
Query: 62 LGPTISVCNVC 72
+C++C
Sbjct: 59 ------LCDIC 63
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 4 CELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRT 43
CE+C +PA + C++D A+LC CDA +H AN L + H R
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 2 KKCELCGS-PAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLTPWNGSGP 60
+ C+ C S A +FC D A LC CD ++H H R +C VC+
Sbjct: 20 RSCDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWVCEVCEQAPAAVTCKA 75
Query: 61 KLGPTISVCNVCVGNGSGSTSREETNRGETYTD 93
C+ + + + SR E ET+ D
Sbjct: 76 DAAALCVSCDADIHSANPLASRHERVPVETFFD 108
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Query: 3 KCELCGSPAK-MFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLTPWNGSGPK 61
+C++C A +FC D+A LC DCD +H AN ANH R L +G K
Sbjct: 56 RCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL------------ATGIK 103
Query: 62 LGPTISVCN 70
+ T ++C+
Sbjct: 104 VALTSTICS 112
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 10/58 (17%)
Query: 3 KCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLL---------CHVCQ 50
+C++C +PA + C +D+A+LC CD ++H AN L + H R L C +CQ
Sbjct: 4 QCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQ 61
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1
SV=1
Length = 242
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 4 CELCG-SPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLLCHVCQSLTP 54
C++CG A +FC+ D+A LC +CD +H AN H+R LL V S +P
Sbjct: 58 CDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASP 109
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 4 CELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLL 45
C +C A +FC +D+A+LC CD VH AN L H R L
Sbjct: 5 CAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSL 47
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 2 KKCELC-GSPAKMFCESDQASLCWDCDAKVHGANFLVANHSRTLL 45
+ CELC A +C SD A LC CD VH AN + H R L
Sbjct: 19 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 63
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,343,041
Number of Sequences: 539616
Number of extensions: 3933172
Number of successful extensions: 94226
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 712
Number of HSP's that attempted gapping in prelim test: 40856
Number of HSP's gapped (non-prelim): 27776
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)