Query 029924
Match_columns 185
No_of_seqs 126 out of 1079
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 08:56:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6z_A Poly [ADP-ribose] polym 100.0 1.1E-48 3.6E-53 309.0 18.4 172 7-184 30-214 (214)
2 3q71_A Poly [ADP-ribose] polym 100.0 1.4E-47 4.8E-52 303.4 21.0 171 8-185 33-217 (221)
3 2xd7_A Core histone macro-H2A. 100.0 7.8E-47 2.7E-51 294.6 19.3 166 9-181 14-192 (193)
4 1spv_A Putative polyprotein/ph 100.0 1.2E-46 4.3E-51 291.5 20.3 165 13-183 2-175 (184)
5 1yd9_A Core histone macro-H2A. 100.0 1.5E-46 5E-51 293.0 18.5 167 9-182 14-190 (193)
6 4abl_A Poly [ADP-ribose] polym 100.0 6.4E-46 2.2E-50 286.8 19.4 156 7-182 16-181 (183)
7 2x47_A Macro domain-containing 100.0 1.6E-45 5.3E-50 294.7 19.7 162 13-184 61-233 (235)
8 3kh6_A Poly [ADP-ribose] polym 100.0 4.7E-44 1.6E-48 279.3 19.9 160 4-183 24-193 (199)
9 1vhu_A Hypothetical protein AF 100.0 2.4E-44 8.1E-49 284.0 15.4 166 12-185 19-203 (211)
10 2dx6_A Hypothetical protein TT 100.0 1.4E-43 4.9E-48 268.6 16.7 152 15-179 3-159 (159)
11 3eti_A X (ADRP) domain, macro 100.0 1.4E-43 4.9E-48 270.0 11.5 150 13-180 9-167 (168)
12 3gqe_A Non-structural protein 100.0 4.1E-41 1.4E-45 256.3 15.9 152 13-182 3-161 (168)
13 3gpg_A NSP3, non-structural pr 100.0 1.2E-41 4.1E-46 259.1 11.5 150 13-181 9-166 (168)
14 3ejg_A Non-structural protein 100.0 8.3E-41 2.8E-45 259.0 11.3 147 13-180 37-192 (193)
15 3ejf_A Non-structural protein 100.0 1.6E-40 5.5E-45 254.3 11.7 163 4-179 4-175 (176)
16 2acf_A Replicase polyprotein 1 100.0 2.4E-40 8.2E-45 255.3 10.3 148 13-183 19-175 (182)
17 2vri_A Non-structural protein 100.0 2.1E-39 7.1E-44 248.8 9.6 152 13-181 16-172 (174)
18 1njr_A 32.1 kDa protein in ADH 100.0 7.8E-36 2.7E-40 243.7 12.2 159 12-175 43-242 (284)
19 4gua_A Non-structural polyprot 100.0 2.9E-34 9.8E-39 247.9 13.4 150 13-181 343-500 (670)
20 2jyc_A Uncharacterized protein 100.0 5.7E-29 1.9E-33 188.3 12.3 137 10-167 16-158 (160)
21 2eee_A Uncharacterized protein 100.0 9E-29 3.1E-33 185.3 12.3 137 12-168 7-148 (149)
22 2fg1_A Conserved hypothetical 99.9 1.3E-26 4.4E-31 175.1 10.5 131 14-153 4-147 (158)
23 3sig_A PArg, poly(ADP-ribose) 99.3 1.3E-11 4.5E-16 100.1 8.9 93 89-181 171-276 (277)
24 2vg0_A Short-chain Z-isoprenyl 59.2 13 0.00043 28.8 4.6 48 109-157 33-80 (227)
25 3ugs_B Undecaprenyl pyrophosph 47.3 20 0.00069 27.7 4.0 47 109-156 36-82 (225)
26 4h8e_A Undecaprenyl pyrophosph 41.3 27 0.00094 27.5 4.0 41 107-147 52-92 (256)
27 3dhn_A NAD-dependent epimerase 40.2 29 0.001 25.3 4.0 44 87-131 68-111 (227)
28 3lgd_A Adenosine deaminase CEC 36.7 1.5E+02 0.005 25.6 8.2 53 105-157 195-252 (508)
29 3sgv_B Undecaprenyl pyrophosph 35.7 27 0.00094 27.4 3.2 49 107-156 45-93 (253)
30 1qd9_A Purine regulatory prote 35.0 1E+02 0.0035 20.7 5.9 24 161-184 72-95 (124)
31 2zvr_A Uncharacterized protein 34.9 1.5E+02 0.005 22.5 7.6 62 106-168 109-170 (290)
32 1qu9_A YJGF protein; structura 34.3 1.1E+02 0.0037 20.8 6.0 24 161-184 73-96 (128)
33 3l7q_A Putative translation in 33.7 84 0.0029 21.3 5.2 24 161-184 73-96 (125)
34 3kjj_A NMB1025 protein; YJGF p 32.5 1.1E+02 0.0039 20.9 5.8 24 161-184 70-93 (128)
35 3qc0_A Sugar isomerase; TIM ba 32.1 1.6E+02 0.0053 21.9 7.3 52 106-157 79-130 (275)
36 2vg3_A Undecaprenyl pyrophosph 31.3 48 0.0017 26.4 4.0 40 108-147 84-123 (284)
37 3vcz_A Endoribonuclease L-PSP; 30.9 1.3E+02 0.0044 21.3 6.0 24 161-184 97-120 (153)
38 2b33_A Protein synthesis inhib 29.7 1.4E+02 0.0048 20.7 5.9 24 161-184 86-109 (140)
39 2d2r_A Undecaprenyl pyrophosph 29.6 39 0.0013 26.3 3.1 40 108-147 44-83 (245)
40 1i60_A IOLI protein; beta barr 29.4 1.7E+02 0.0059 21.6 7.0 51 106-157 80-130 (278)
41 2qn6_B Translation initiation 29.1 32 0.0011 22.6 2.2 35 86-123 51-85 (93)
42 1jd1_A Hypothetical 13.9 kDa p 29.0 1.1E+02 0.0038 20.7 5.2 24 161-184 76-99 (129)
43 3r0p_A L-PSP putative endoribo 28.8 1.4E+02 0.0046 20.2 5.6 25 160-184 75-99 (127)
44 2cvl_A TTHA0137, protein trans 28.7 1.3E+02 0.0046 20.1 5.9 24 161-184 72-95 (124)
45 3ngf_A AP endonuclease, family 28.5 1.9E+02 0.0063 21.7 8.5 51 105-157 88-138 (269)
46 3h2s_A Putative NADH-flavin re 28.1 66 0.0023 23.2 4.2 42 86-130 62-103 (224)
47 1x25_A Hypothetical UPF0076 pr 27.9 1.2E+02 0.0041 20.6 5.2 24 161-184 76-99 (128)
48 3iar_A Adenosine deaminase; pu 27.8 2.2E+02 0.0076 23.2 7.6 54 104-157 72-139 (367)
49 2ewc_A Conserved hypothetical 27.6 1.2E+02 0.0042 20.5 5.2 24 161-184 65-88 (126)
50 3m1x_A Putative endoribonuclea 26.8 1.3E+02 0.0044 21.1 5.3 25 160-184 96-120 (148)
51 3qas_B Undecaprenyl pyrophosph 26.8 49 0.0017 25.9 3.2 39 109-147 47-85 (253)
52 3pao_A Adenosine deaminase; st 26.1 1.3E+02 0.0045 24.1 5.9 53 104-157 72-127 (326)
53 2cwj_A Putative endonuclease; 26.0 1.2E+02 0.0043 20.3 5.0 26 159-184 66-91 (123)
54 1pf5_A Hypothetical protein YJ 25.5 1.6E+02 0.0055 19.9 5.7 24 161-184 76-100 (131)
55 3gtz_A Putative translation in 25.3 1.5E+02 0.0051 20.0 5.3 24 161-184 64-87 (124)
56 3v4d_A Aminoacrylate peracid r 25.0 1.4E+02 0.0049 20.4 5.2 24 161-184 81-104 (134)
57 3i7t_A RV2704, putative unchar 25.0 1.5E+02 0.005 21.0 5.3 51 104-184 41-91 (149)
58 3k0t_A Endoribonuclease L-PSP, 24.8 1E+02 0.0036 21.5 4.5 24 161-184 91-114 (143)
59 4gqb_A Protein arginine N-meth 24.7 34 0.0012 30.6 2.2 27 13-39 410-436 (637)
60 3ew7_A LMO0794 protein; Q8Y8U8 24.3 99 0.0034 22.1 4.5 42 86-131 61-102 (221)
61 4gxw_A Adenosine deaminase; am 24.2 1.5E+02 0.0051 24.4 5.9 54 104-157 90-146 (380)
62 1qah_A Perchloric acid soluble 23.7 1.2E+02 0.0041 20.9 4.6 24 161-184 77-100 (136)
63 1k77_A EC1530, hypothetical pr 23.5 2.2E+02 0.0076 20.9 8.7 52 105-157 80-131 (260)
64 3quw_A Protein MMF1; chorismat 23.3 1.6E+02 0.0054 20.9 5.2 25 160-184 99-123 (153)
65 3l23_A Sugar phosphate isomera 23.3 2.2E+02 0.0076 21.9 6.7 48 105-156 103-150 (303)
66 1f75_A Undecaprenyl pyrophosph 22.9 2.7E+02 0.0091 21.6 7.4 38 108-145 49-86 (249)
67 3obe_A Sugar phosphate isomera 22.8 2.4E+02 0.0083 21.7 6.8 48 105-156 109-156 (305)
68 3m2p_A UDP-N-acetylglucosamine 22.5 1.6E+02 0.0054 22.5 5.6 46 86-131 62-108 (311)
69 2plx_B Peptide inhibitor; heli 21.8 48 0.0017 15.9 1.5 12 104-115 13-24 (26)
70 3k12_A Uncharacterized protein 21.3 1.2E+02 0.0041 20.4 4.1 24 161-184 62-85 (122)
71 3cqj_A L-ribulose-5-phosphate 20.7 2.6E+02 0.009 21.0 6.6 50 106-156 104-153 (295)
72 2dyy_A UPF0076 protein PH0854; 20.7 1.2E+02 0.004 20.5 4.0 20 104-123 47-66 (126)
73 1xrg_A Putative translation in 20.5 1.4E+02 0.0049 21.2 4.5 24 161-184 105-128 (156)
74 2hl0_A Threonyl-tRNA synthetas 20.3 2.4E+02 0.0082 20.0 6.2 55 103-157 52-106 (143)
75 3rys_A Adenosine deaminase 1; 20.0 1.6E+02 0.0053 23.8 5.2 53 104-157 75-130 (343)
No 1
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=308.99 Aligned_cols=172 Identities=31% Similarity=0.436 Sum_probs=158.6
Q ss_pred EeeeCCCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEcc
Q 029924 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITP 81 (185)
Q Consensus 7 ~~~~~~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~ 81 (185)
.+.+.++.+|++++||||++++ |||||++|+.+.+++| ++++|++|++||+++.+. .+++++|++++|+
T Consensus 30 ~~~~~~g~~I~v~~GDIt~~~v----DaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT~ 103 (214)
T 3q6z_A 30 RTVLAPGVVLIVQQGDLARLPV----DVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKR--EGRLLPGNATISK 103 (214)
T ss_dssp EEEEETTEEEEEEECCTTSCSS----SEEEEEECTTCCCCSHHHHHHHHHHCTHHHHHHHHHHHH--HCCCCTTCEEEEE
T ss_pred EEEcCCCcEEEEEecccccCcC----CEEEeCCCCCCCCCchHHHHHHHhhhHHHHHHHHHHHHH--cCCCCCCeEEEEc
Confidence 4567789999999999999986 9999999999999998 899999999999987632 3589999999999
Q ss_pred CCCCCCCeEEEecCCCcCCCCC--hHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc--
Q 029924 82 GFKLPVSHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN-- 157 (185)
Q Consensus 82 ~~~L~~k~IiH~v~P~~~~~~~--~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~-- 157 (185)
+++|+||||||+|+|.|+.+.. +.+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 104 ~~~L~~k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~~fl~~~ 183 (214)
T 3q6z_A 104 AGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFK 183 (214)
T ss_dssp CTTSSSSEEEEEECCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999988652 467999999999999999999999999999999999999999999999999984
Q ss_pred ----CCCeEEEEecChHHHHHHHHHHHHHhc
Q 029924 158 ----DFKEVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 158 ----~l~~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
.+++|+||+++++++++|+++++++|+
T Consensus 184 ~~~~~l~~V~fv~~d~~~~~~f~~~l~~~f~ 214 (214)
T 3q6z_A 184 KDGHCLKEIYLVDVSEKTVEAFAEAVKTVFK 214 (214)
T ss_dssp C--CCCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 478999999999999999999999984
No 2
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-47 Score=303.44 Aligned_cols=171 Identities=23% Similarity=0.369 Sum_probs=155.2
Q ss_pred eeeCCCcEEEEEEccccccccCCCCcEEEEccCCCCC-CCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEcc
Q 029924 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-LGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITP 81 (185)
Q Consensus 8 ~~~~~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~-~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~ 81 (185)
..+.++.+|++++||||++++ |||||+||+.|. +++| ++++|++|++||+++.+ ++++++|++++|+
T Consensus 33 ~~t~~g~~I~i~~GDIt~~~v----DAIVNaAN~~l~~~gGGV~~AI~~aaG~~L~~ec~~~~~---~~~~~~G~a~iT~ 105 (221)
T 3q71_A 33 LVSPGGLQMLLVKEGVQNAKT----DVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQ---GVAVSMGTVLKTS 105 (221)
T ss_dssp EECTTCCEEEEEESCGGGCCS----SEEEEECCTTCCTTSSHHHHHHHHHHCTHHHHHHHHHHH---TSCCCTTCEEEEE
T ss_pred eeecCCcEEEEEeCcccCCcC----CEEEECCCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc---cCCCCCCeEEEEc
Confidence 456789999999999999986 999999999995 5666 89999999999998752 4589999999999
Q ss_pred CCCCCCCeEEEecCCCcCCCC-ChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc---
Q 029924 82 GFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN--- 157 (185)
Q Consensus 82 ~~~L~~k~IiH~v~P~~~~~~-~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~--- 157 (185)
+|+|+||||||+|+|.|+.+. .+.+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 106 g~~Lp~k~VIHtVgP~~~~~~~~~~~~L~~~y~~~L~~A~e~~i~SIAfPaIsTG~~G~P~~~aA~i~~~~v~~fl~~~~ 185 (221)
T 3q71_A 106 SWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQ 185 (221)
T ss_dssp CTTSSSSEEEEECCCCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCEEEEeCCCCCcCCCchHHHHHHHHHHHHHHHHHHhCCceEeeccccCCCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998875 3468999999999999999999999999999999999999999999999999984
Q ss_pred --CCCeEEEEecCh--HHHHHHHHHHHHHhcC
Q 029924 158 --DFKEVHFILFTD--DIYNVWLKKAKELLQG 185 (185)
Q Consensus 158 --~l~~V~~v~~~~--~~~~~f~~~~~~~~~~ 185 (185)
.+++|+||+|++ ++|++|.++|++.|.|
T Consensus 186 ~~~l~~V~fv~f~~d~~~~~~f~~~l~~r~~~ 217 (221)
T 3q71_A 186 LKTLQEVHFLLHPSDHENIQAFSDEFARRANG 217 (221)
T ss_dssp CSSCCEEEEEECTTCHHHHHHHHHHHHHHHC-
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHccC
Confidence 578999999965 5789999999999854
No 3
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.8e-47 Score=294.64 Aligned_cols=166 Identities=23% Similarity=0.411 Sum_probs=153.8
Q ss_pred eeCCCcEEEEEEcccccc---ccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEc
Q 029924 9 SFSTKTSLKISKGDISRW---CVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARIT 80 (185)
Q Consensus 9 ~~~~~~~i~i~~GDI~~~---~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T 80 (185)
.+..+.+|++++||||++ ++ |||||++|+.+.+++| ++++|++|++||+++.+. .+++++|++++|
T Consensus 14 ~~~~~~~i~i~~GDIt~~~~~~~----DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT 87 (193)
T 2xd7_A 14 SLVLGQKLSLTQSDISHIGSMRV----EGIVHPTTAEIDLKEDIGKALEKAGGKEFLETVKELRKS--QGPLEVAEAAVS 87 (193)
T ss_dssp ECTTSCEEEEEECCGGGGGGCCC----SEEEEEECTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHH--TCSCCTTCEEEE
T ss_pred ccCCCCEEEEEeCcccccCCCCC----CEEEECCCccCCCccHHHHHHHHHhhHHHHHHHHHHHHH--cCCCCCCCeEEe
Confidence 345689999999999999 76 9999999999999998 899999999999988642 358999999999
Q ss_pred cCCCCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc---
Q 029924 81 PGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN--- 157 (185)
Q Consensus 81 ~~~~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~--- 157 (185)
++++|+||||||+++|.|+.. .+.+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 88 ~~~~L~~k~VIH~vgP~~~~~-~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~ 166 (193)
T 2xd7_A 88 QSSGLAAKFVIHCHIPQWGSD-KCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSS 166 (193)
T ss_dssp ECTTSSSSEEEEEECCCTTST-THHHHHHHHHHHHHHHHHHTTCSEEEECCCCCSTTCCCHHHHHHHHHHHHHHHHHHCS
T ss_pred eCCCCCCCEEEEECCCcCCCc-chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999764 5778999999999999999999999999999999999999999999999999984
Q ss_pred --CCCeEEEEecChHHHHHHHHHHHH
Q 029924 158 --DFKEVHFILFTDDIYNVWLKKAKE 181 (185)
Q Consensus 158 --~l~~V~~v~~~~~~~~~f~~~~~~ 181 (185)
.+++|+||+|++++|++|+++|++
T Consensus 167 ~~~l~~V~fv~~~~~~~~~~~~~l~~ 192 (193)
T 2xd7_A 167 ASSLKNVYFLLFDSESIGIYVQEMAK 192 (193)
T ss_dssp SCCCCEEEEEECSHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHhh
Confidence 488999999999999999999875
No 4
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=100.00 E-value=1.2e-46 Score=291.52 Aligned_cols=165 Identities=38% Similarity=0.588 Sum_probs=152.6
Q ss_pred CcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
+.+|++++||||++++ |||||++|+.+.+|+| ++++|++|++||+++.+. .+++++|++++|++++|+|
T Consensus 2 ~~~i~i~~GDIt~~~~----DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~e~~~~~~~--~g~~~~G~a~iT~~~~L~~ 75 (184)
T 1spv_A 2 KTRIHVVQGDITKLAV----DVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQ--QGDCPTGHAVITLAGDLPA 75 (184)
T ss_dssp -CCEEEEESCGGGCCC----SEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHHHHHH--HCSCCTTCEEEECCTTSSS
T ss_pred CCeEEEEeCcCCcCCC----CEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHh--cCCCCCCCEEEeeCCCCCC
Confidence 3579999999999986 9999999999999998 899999999999988632 3489999999999999999
Q ss_pred CeEEEecCCCcCCCC-ChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc---CCCeEE
Q 029924 88 SHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN---DFKEVH 163 (185)
Q Consensus 88 k~IiH~v~P~~~~~~-~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~---~l~~V~ 163 (185)
|||||+++|.|+.+. .+.+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++ .+++|+
T Consensus 76 k~VIH~vgP~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~~~~~V~ 155 (184)
T 1spv_A 76 KAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVY 155 (184)
T ss_dssp SEEEEECCCCCSSSSSSHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHHCCSSSEEE
T ss_pred CEEEEEcCCcccCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 999999999998764 4678999999999999999999999999999999999999999999999999985 578999
Q ss_pred EEecChHHHHHHHHHHHHHh
Q 029924 164 FILFTDDIYNVWLKKAKELL 183 (185)
Q Consensus 164 ~v~~~~~~~~~f~~~~~~~~ 183 (185)
||+|+++++++|+++|+++|
T Consensus 156 ~v~~~~~~~~~~~~~l~~~~ 175 (184)
T 1spv_A 156 FVCYDEENAHLYERLLTQQG 175 (184)
T ss_dssp EEESSHHHHHHHHHHHHCC-
T ss_pred EEECCHHHHHHHHHHHHHhC
Confidence 99999999999999999887
No 5
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=100.00 E-value=1.5e-46 Score=293.02 Aligned_cols=167 Identities=26% Similarity=0.497 Sum_probs=154.0
Q ss_pred eeCCCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCC
Q 029924 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGF 83 (185)
Q Consensus 9 ~~~~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~ 83 (185)
.+..+.+|++++||||++++ |||||++|+.+.+++| ++++|++|++||+++.+. .+++++|++++|+++
T Consensus 14 ~~~~~~~i~i~~GDIt~~~~----DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT~~~ 87 (193)
T 1yd9_A 14 SLFLGQKLQVVQADIASIDS----DAVVHPTNTDFYIGGEVGSTLEKKGGKEFVEAVLELRKK--NGPLEVAGAAVSAGH 87 (193)
T ss_dssp ECTTSCEEEEECSCGGGCCC----SEEEEECCTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHH--HCSCCTTCEEEEECT
T ss_pred CcCCCCEEEEEeCccCcCcC----CEEEECCCccCCCCchHHHHHHHHhhHHHHHHHHHHHHH--cCCCCCCCEEEecCC
Confidence 44568999999999999986 9999999999999998 899999999999987642 358999999999999
Q ss_pred CCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc-----C
Q 029924 84 KLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN-----D 158 (185)
Q Consensus 84 ~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~-----~ 158 (185)
+|+||||||+++|.|+.. .+.+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++ .
T Consensus 88 ~L~~k~VIH~vgP~~~~~-~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~~~~ 166 (193)
T 1yd9_A 88 GLPAKFVIHCNSPVWGSD-KCEELLEKTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSS 166 (193)
T ss_dssp TSSSSEEEEECCCCTTST-THHHHHHHHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHHHHHHHHHTTCTTCC
T ss_pred CCCCCEEEEeCCCCcCCc-chHHHHHHHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999753 5678999999999999999999999999999999999999999999999999985 4
Q ss_pred CCeEEEEecChHHHHHHHHHHHHH
Q 029924 159 FKEVHFILFTDDIYNVWLKKAKEL 182 (185)
Q Consensus 159 l~~V~~v~~~~~~~~~f~~~~~~~ 182 (185)
+++|+||+|+++++++|+++|+++
T Consensus 167 l~~V~fv~~~~~~~~~~~~~l~~~ 190 (193)
T 1yd9_A 167 IKTVYFVLFDSESIGIYVQEMAKL 190 (193)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT
T ss_pred cCEEEEEECCHHHHHHHHHHHHhh
Confidence 789999999999999999999764
No 6
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=100.00 E-value=6.4e-46 Score=286.79 Aligned_cols=156 Identities=24% Similarity=0.394 Sum_probs=147.0
Q ss_pred EeeeCCCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEcc
Q 029924 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITP 81 (185)
Q Consensus 7 ~~~~~~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~ 81 (185)
.+++ ++.+|++++||||++++ |||||++|+.+.+++| ++++|++|++||+++. ++++|++++|+
T Consensus 16 ~~~i-g~~~i~i~~GDIt~~~~----DaIVNaaN~~l~~ggGV~~aI~~aaG~~l~~ec~~~~------~~~~G~a~iT~ 84 (183)
T 4abl_A 16 EMKI-GSIIFQVASGDITKEEA----DVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQA------QQRKNDYIITG 84 (183)
T ss_dssp EEEE-TTEEEEEEESCGGGCBC----SEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHH------HHSCCSEEEEE
T ss_pred EEEE-CCEEEEEEeCcccCccc----CEEEECCCCCCCCCccHHHHHHHHhhHHHHHHHHHhc------CCCCCceEEec
Confidence 3444 78999999999999986 9999999999999998 8999999999999875 68999999999
Q ss_pred CCCCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc----
Q 029924 82 GFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN---- 157 (185)
Q Consensus 82 ~~~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~---- 157 (185)
+|+|+||||||+++|.| |++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 85 ~~~L~~k~VIH~vgP~~---------L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~~~~~ 155 (183)
T 4abl_A 85 GGFLRCKNIIHVIGGND---------VKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIEDFVQKGSA 155 (183)
T ss_dssp CTTSBSSEEEEEETTSC---------HHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCEEEEeCcHHH---------HHHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999986 99999999999999999999999999999999999999999999999985
Q ss_pred -CCCeEEEEecChHHHHHHHHHHHHH
Q 029924 158 -DFKEVHFILFTDDIYNVWLKKAKEL 182 (185)
Q Consensus 158 -~l~~V~~v~~~~~~~~~f~~~~~~~ 182 (185)
.+++|+||+|++++|++|+++|++.
T Consensus 156 ~~l~~V~fv~f~~~~~~~f~~~l~kr 181 (183)
T 4abl_A 156 QSVKKVKVVIFLPQVLDVFYANMKKR 181 (183)
T ss_dssp SSCCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 4789999999999999999999884
No 7
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-45 Score=294.73 Aligned_cols=162 Identities=33% Similarity=0.552 Sum_probs=152.3
Q ss_pred CcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
|.+|+|++||||++++ |||||+||+.+.+|+| ++++|++|++||+++. ++++|++++|++++|+|
T Consensus 61 ~~~i~i~~GDIt~~~v----DaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~g------~~~~G~a~iT~~~~L~~ 130 (235)
T 2x47_A 61 NEKISLLRSDITKLEV----DAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQ------SCKTGKAKITGGYRLPA 130 (235)
T ss_dssp HTTEEEEESCGGGEES----SEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHTSC------CCCBTCEEEEECTTSSS
T ss_pred CCEEEEEeCccCcccC----CEEEEecCcccCCccHHHHHHHHHhCHHHHHHHHHhC------CCCCCceEEecCCCCCC
Confidence 6889999999999987 9999999999999998 8999999999998763 79999999999999999
Q ss_pred CeEEEecCCCcCCCC--ChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc----CCCe
Q 029924 88 SHVIHTVGPVFNFHC--NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN----DFKE 161 (185)
Q Consensus 88 k~IiH~v~P~~~~~~--~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~----~l~~ 161 (185)
+||||+|+|.|+++. .+.+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++ .+++
T Consensus 131 k~VIH~vgP~~~~~~~~~~~~~L~~~y~~~L~~A~e~~i~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~~~~~~l~~ 210 (235)
T 2x47_A 131 KYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDR 210 (235)
T ss_dssp SEEEEEBCCCCTTCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTCSTTSCCHHHHHHHHHHHHHHHHHHHGGGCSE
T ss_pred CEEEEecCccccCCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 999999999997643 4578999999999999999999999999999999999999999999999999985 4889
Q ss_pred EEEEecChHHHHHHHHHHHHHhc
Q 029924 162 VHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 162 V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
|+||+|+++.+++|++.++.||-
T Consensus 211 V~fv~f~~~~~~~y~~~l~~~fp 233 (235)
T 2x47_A 211 LIICVFLEKDEDIYRSRLPHYFP 233 (235)
T ss_dssp EEEEECSHHHHHHHHHHHHHHSC
T ss_pred EEEEECCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999983
No 8
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=100.00 E-value=4.7e-44 Score=279.29 Aligned_cols=160 Identities=22% Similarity=0.338 Sum_probs=148.1
Q ss_pred eeeEeeeCCCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEE
Q 029924 4 KVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEAR 78 (185)
Q Consensus 4 ~~~~~~~~~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~ 78 (185)
.+..+++ ++.+|++++|||+++++ |||||++|+.+.+++| ++++|++|++||+++. ++++|+++
T Consensus 24 ~~~~~~i-~~~~i~i~~GDIt~~~v----DaIVNaaN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~------~~~~G~a~ 92 (199)
T 3kh6_A 24 TAYEMKI-GAITFQVATGDIATEQV----DVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLA------AQPHRDFI 92 (199)
T ss_dssp CEEEEEE-TTEEEEEEESCGGGCCS----SEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHH------TSCCCSSE
T ss_pred CceEEEE-CCEEEEEEecccccCcC----CEEEECCCCCCCCCchHHHHHHHHhhHHHHHHHHHhC------CCCCCeEE
Confidence 3444555 78999999999999986 9999999999999998 8999999999999875 68999999
Q ss_pred EccCCCCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc-
Q 029924 79 ITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN- 157 (185)
Q Consensus 79 ~T~~~~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~- 157 (185)
+|++++|+||||||+++|. .|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 93 iT~g~~L~~k~VIH~vgp~---------~L~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v~~fl~~ 163 (199)
T 3kh6_A 93 ITPGGCLKCKIIIHVPGGK---------DVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQ 163 (199)
T ss_dssp EEECTTSSSSEEEEEETTS---------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCEEEEeCCCH---------HHHHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999995 499999999999999999999999999999999999999999999999985
Q ss_pred ----CCCeEEEEecChHHHHHHHHHHHHHh
Q 029924 158 ----DFKEVHFILFTDDIYNVWLKKAKELL 183 (185)
Q Consensus 158 ----~l~~V~~v~~~~~~~~~f~~~~~~~~ 183 (185)
.+++|+||+|+++++++|+++|++..
T Consensus 164 ~~~~~l~~V~fv~f~~~~~~~f~~~l~~~~ 193 (199)
T 3kh6_A 164 HSTPSLKTVKVVIFQPELLNIFYDSMKKRD 193 (199)
T ss_dssp CSSCSCCEEEEEESSTHHHHHHHHHHHTTC
T ss_pred cCCCCCCEEEEEECCHHHHHHHHHHHHhcc
Confidence 47899999999999999999998753
No 9
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=100.00 E-value=2.4e-44 Score=283.99 Aligned_cols=166 Identities=28% Similarity=0.404 Sum_probs=152.3
Q ss_pred CCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhC----HHHHHHHhhccccCCCCC--CCCCcEEEc
Q 029924 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAG----PDLQKACYQIPEAQPRVR--CPPGEARIT 80 (185)
Q Consensus 12 ~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G----~~l~~e~~~~~~~~~~~~--~~~G~~~~T 80 (185)
++.+|++++||||++++ |||||++|+.+.+++| ++++| ++++++|+++.+. .++ +++|++++|
T Consensus 19 ~~~~i~i~~GDIt~~~v----DaIVNaaN~~l~~ggGV~~aI~~aaG~~~~~~l~~ec~~~~~~--~g~~~~~~G~a~iT 92 (211)
T 1vhu_A 19 GDITLKLAQGDITQYPA----KAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQ--FGRDYIDHGEVVVT 92 (211)
T ss_dssp TTEEEEEEESCGGGSCC----SEEEEEECTTCCCCSHHHHHHHHHHHSSHHHHHHHHHHHHHHH--HSSSCCCTTCCEEE
T ss_pred CCEEEEEEecccCcCCC----CEEEECCCccccCccHHHHHHHHHhCCCchHHHHHHHHHHHHH--cCCCcccCCcEEEE
Confidence 67899999999999986 9999999999999998 88999 9999999986642 235 999999999
Q ss_pred cCCCCCC---CeEEEecCC----CcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHH
Q 029924 81 PGFKLPV---SHVIHTVGP----VFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 153 (185)
Q Consensus 81 ~~~~L~~---k~IiH~v~P----~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~ 153 (185)
++++|++ |||||+++| .|.+ .+.+.|++||++||+.|.+++++|||||+||||++|||++++|++|+++++
T Consensus 93 ~~~~L~~~g~k~VIH~vgP~~~~~~~~--~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~aa~i~~~~v~ 170 (211)
T 1vhu_A 93 PAMNLEERGIKYVFHTVGPICSGMWSE--ELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETFLEAVK 170 (211)
T ss_dssp ECGGGGGGTCCEEEEEECCCCTTCCCH--HHHHHHHHHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHHHHHHHHHHH
T ss_pred ECCCCCccCcCEEEEecCCccccccCc--chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHH
Confidence 9999999 999999999 9954 567899999999999999999999999999999999999999999999999
Q ss_pred HHhc-CCCeEEEEecChHHHHHHHHHHHHHhcC
Q 029924 154 EFAN-DFKEVHFILFTDDIYNVWLKKAKELLQG 185 (185)
Q Consensus 154 ~~~~-~l~~V~~v~~~~~~~~~f~~~~~~~~~~ 185 (185)
+|++ .+++|+||+|+++.+++|++.|+.+.+|
T Consensus 171 ~~l~~~l~~V~~v~~~~~~~~~~~~~l~~~~~~ 203 (211)
T 1vhu_A 171 NFKGSAVKEVALVIYDRKSAEVALKVFERSLEG 203 (211)
T ss_dssp HCCCSSCCEEEEEESSHHHHHHHHHHHHHHC--
T ss_pred HHHhCCCCEEEEEECCHHHHHHHHHHHHHhhcc
Confidence 9984 3789999999999999999999999865
No 10
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=100.00 E-value=1.4e-43 Score=268.59 Aligned_cols=152 Identities=27% Similarity=0.392 Sum_probs=143.4
Q ss_pred EEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCCCe
Q 029924 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSH 89 (185)
Q Consensus 15 ~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~k~ 89 (185)
+|++++|||+++++ |+|||++|+.+.+|+| ++++|++++++|++.. ++++|++++|++++|+++|
T Consensus 3 ~i~i~~GDI~~~~~----daIVnaaN~~l~~ggGv~~aI~~~~G~~l~~~c~~~g------~~~~G~a~it~~~~L~~~~ 72 (159)
T 2dx6_A 3 RIRVVQGDITEFQG----DAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIG------KIRVGEAAVTGAGNLPVRY 72 (159)
T ss_dssp EEEEEESCGGGCCS----SEEEEEEETTCCCCSTTHHHHHHHHCTHHHHHHHHHC------CCCTTCEEEEECTTSSSSE
T ss_pred EEEEEECcCCcCCC----CEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHhcC------CCCCCcEEEecCCCCCCCE
Confidence 68999999999986 9999999999999998 8999999999999753 7899999999999999999
Q ss_pred EEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEecCh
Q 029924 90 VIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILFTD 169 (185)
Q Consensus 90 IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~~v~~~~ 169 (185)
|||+++|.|+ . .+.+.|++||+++|+.|.+++++|||||+||||++|+|++++|++|++++++| +.+++|+||+|++
T Consensus 73 Vih~vgp~~~-~-~~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~~~~~~~-~~~~~V~~v~~~~ 149 (159)
T 2dx6_A 73 VIHAAVLGDE-P-ASLETVRKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVMLEEIKKA-PDTLEVTLYGYRE 149 (159)
T ss_dssp EEEEEEESSS-C-CCHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHTTS-CTTCEEEEEESSH
T ss_pred EEEEeCCCCC-C-chHHHHHHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHHHHHHhc-CCCCEEEEEECCH
Confidence 9999999998 3 45789999999999999999999999999999999999999999999999999 7889999999999
Q ss_pred HHHHHHHHHH
Q 029924 170 DIYNVWLKKA 179 (185)
Q Consensus 170 ~~~~~f~~~~ 179 (185)
+++++|++.+
T Consensus 150 ~~~~~~~~~l 159 (159)
T 2dx6_A 150 EDAEAIRRAL 159 (159)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 11
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=100.00 E-value=1.4e-43 Score=269.99 Aligned_cols=150 Identities=21% Similarity=0.216 Sum_probs=137.8
Q ss_pred CcEEEEEEccccc----cccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCC
Q 029924 13 KTSLKISKGDISR----WCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGF 83 (185)
Q Consensus 13 ~~~i~i~~GDI~~----~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~ 83 (185)
..+|++++||||+ +++ |||||+||+.|.+++| ++++|++|++||+++++ ..+++++|++++|+++
T Consensus 9 ~~~i~l~~GDIt~~~~~~~v----DaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~--~~g~~~~G~a~iT~g~ 82 (168)
T 3eti_A 9 AGKVSFYQGDLDVLINFLEP----DVLVNAANGDLRHVGGVARAIDVFTGGKLTKRSKEYLK--SSKAIAPGNAVLFENV 82 (168)
T ss_dssp ETTEEEEESCHHHHHHHHCC----SEEEEEECTTCCCCSTTHHHHHHHTTTHHHHHHHHHHT--TSCCCCTTEEEEEEEE
T ss_pred CCeEEEEeCcccccCCCCCC----CEEEeCCCcccCCCchHHHHHHHHHHHHHHHHHHHHHH--HcCCCCCCCEEEecCC
Confidence 4789999999999 776 9999999999999998 99999999999999874 3468999999999999
Q ss_pred CCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 029924 84 KLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVH 163 (185)
Q Consensus 84 ~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~ 163 (185)
|+++||||+|+|.|... .+.+.|++||++||+. .+|||||+||||++|||++++|++|++++++ ++|+
T Consensus 83 -l~~~~VIHtVgP~~~~~-~~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~P~~~aa~i~~~~v~~-----~~V~ 150 (168)
T 3eti_A 83 -LEHLSVMNAVGPRNGDS-RVEGKLCNVYKAIAKC-----DGKILTPLISVGIFKVKLEVSLQCLLKTVTD-----RDLN 150 (168)
T ss_dssp -ETTEEEEEEECCCTTST-THHHHHHHHHHHHHTS-----CSCEEECCTTBSTTCBCHHHHHHHHHHHCCS-----SCEE
T ss_pred -CCccEEEEecCCCCCcc-hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc-----CeEE
Confidence 99999999999999664 5678999999999985 3799999999999999999999999999987 7999
Q ss_pred EEecChHHHHHHHHHHH
Q 029924 164 FILFTDDIYNVWLKKAK 180 (185)
Q Consensus 164 ~v~~~~~~~~~f~~~~~ 180 (185)
||+|+++.+++|++.+.
T Consensus 151 ~v~f~~~~~~~~~~~l~ 167 (168)
T 3eti_A 151 VFVYTDQERVTIENFFN 167 (168)
T ss_dssp EEECCHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHhc
Confidence 99999999999998874
No 12
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=100.00 E-value=4.1e-41 Score=256.32 Aligned_cols=152 Identities=20% Similarity=0.241 Sum_probs=136.6
Q ss_pred CcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
+.+|++++||||++++ |||||+||+.|.+|+| ++++|++++ .+++++|++++|++ ++
T Consensus 3 ~~~i~v~~GDIt~~~v----DAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----------~~~~~~G~a~iT~~---~~ 64 (168)
T 3gqe_A 3 APSYHVVRGDIATATE----GVIINAANSKGQPGGGVCGALYKKFPESFD-----------LQPIEVGKARLVKG---AA 64 (168)
T ss_dssp CCEEEEEESCGGGCCS----SEEEEEECTTSCCTTGGGSHHHHHCGGGCC-----------CCCCCTTCEEEECC---TT
T ss_pred CCeEEEEeCcccCccc----CEEEeCCCcccCCCccHHHHHHHHhhHHhc-----------CCCcCCCcEEEEcC---CC
Confidence 5789999999999986 9999999999999998 888898652 24899999999998 49
Q ss_pred CeEEEecCCCcCCCCC--hHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEE
Q 029924 88 SHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFI 165 (185)
Q Consensus 88 k~IiH~v~P~~~~~~~--~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~~v 165 (185)
|||||+|+|.|+.+.. +.+.|++||++||++|.+++++|||||+||||++|||++++|+.|.+.+..+-+.+.+|+||
T Consensus 65 k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~~i~~~l~~~~~~~~~V~iv 144 (168)
T 3gqe_A 65 KHIIHAVGPNFNKVSEVEGDKQLAEAYESIAKIVNDNNYKSVAIPLLSTGIFSGNKDRLTQSLNHLLTALDTTDADVAIY 144 (168)
T ss_dssp CCEEEEECCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTSSTTSCSSCCHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CEEEEcCCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHCCCCCCeEEEE
Confidence 9999999999998752 35789999999999999999999999999999999999999998877766665678899999
Q ss_pred ecChHHHHHHHHHHHHH
Q 029924 166 LFTDDIYNVWLKKAKEL 182 (185)
Q Consensus 166 ~~~~~~~~~f~~~~~~~ 182 (185)
+||+++++.|++++.+.
T Consensus 145 ~fd~~~~~~~~~~~~~~ 161 (168)
T 3gqe_A 145 CRDKKWEMTLKEAVARR 161 (168)
T ss_dssp ESCHHHHHHHHHHHHHC
T ss_pred EcCHHHHHHHHHHHHhh
Confidence 99999999999998763
No 13
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=100.00 E-value=1.2e-41 Score=259.12 Aligned_cols=150 Identities=18% Similarity=0.171 Sum_probs=135.0
Q ss_pred CcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
-...++++||||++++ |||||+||+.|.+++| ++++|++++ .+++++|++++|+++ |
T Consensus 9 ~~~~~~~~GDIt~~~v----DAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----------~~~~~~G~a~iT~~~---~ 70 (168)
T 3gpg_A 9 APSYRVKRMDIAKNDE----ECVVNAANPRGLPGDGVCKAVYKKWPESFK-----------NSATPVGTAKTVMCG---T 70 (168)
T ss_dssp CCCC-CEESCGGGCCS----SCEEEECCTTCCCCSHHHHHHHHHCGGGGT-----------TCCCCTTCEEEEEET---T
T ss_pred CCceEEEeCcCCcccC----CEEEeCCCcccCCCchHHHHHHHHhhHHhh-----------cCCCCCCCEEEecCC---C
Confidence 4567899999999987 9999999999999998 899999762 248999999999995 9
Q ss_pred CeEEEecCCCcCCCCC--hHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEE
Q 029924 88 SHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN-DFKEVHF 164 (185)
Q Consensus 88 k~IiH~v~P~~~~~~~--~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~-~l~~V~~ 164 (185)
|||||+|+|.|+.+.. +.+.|++||++||++|.+++++|||||+||||++|||++++|+ +++++.+|++ .+++|+|
T Consensus 71 k~VIHtVGP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~IstGi~g~P~~~aa~-ai~~v~~~~~~~~~~V~f 149 (168)
T 3gpg_A 71 YPVIHAVGPNFSNYSESEGDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ-SLNHLFTAMDSTDADVVI 149 (168)
T ss_dssp EEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECTTSSTTSTTSCCHHH-HC-CHHHHHTTCCSEEEE
T ss_pred CEEEEeCCCCcCCCCcchHHHHHHHHHHHHHHHHHHhCCcEEEECccccCCCCCCHHHHHH-HHHHHHHhccCCCCEEEE
Confidence 9999999999988752 3579999999999999999999999999999999999999999 8899999986 5789999
Q ss_pred EecChHHHHHHHHHHHH
Q 029924 165 ILFTDDIYNVWLKKAKE 181 (185)
Q Consensus 165 v~~~~~~~~~f~~~~~~ 181 (185)
|+|+++++++|++.|++
T Consensus 150 v~f~~~~~~~y~~~l~~ 166 (168)
T 3gpg_A 150 YCRDKEWEKKISEAIQM 166 (168)
T ss_dssp EESCHHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHhc
Confidence 99999999999999986
No 14
>3ejg_A Non-structural protein 3; HCOV 229E, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting, RNA-binding; 1.78A {Human coronavirus 229E} PDB: 3ewr_A* 3ewq_A*
Probab=100.00 E-value=8.3e-41 Score=259.00 Aligned_cols=147 Identities=20% Similarity=0.234 Sum_probs=134.1
Q ss_pred CcEEEEEEccccc----cccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCC
Q 029924 13 KTSLKISKGDISR----WCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGF 83 (185)
Q Consensus 13 ~~~i~i~~GDI~~----~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~ 83 (185)
+.+|++++||||+ +++ |||||+||+.|.+++| ++++|++|++||+++++. .+++++|++++|+++
T Consensus 37 ~~~i~l~~GDIt~~~~~~~v----DAIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~l~~~--~g~~~~G~a~iT~~~ 110 (193)
T 3ejg_A 37 HDNVAFYQGDVDTVVNGVDF----DFIVNAANENLAHGGGLAKALDVYTKGKLQRLSKEHIGL--AGKVKVGTGVMVECD 110 (193)
T ss_dssp ETTEEEEECCHHHHHHHCCC----SEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHH--HCSCCTTCEEEEEET
T ss_pred CCeEEEEeCcccccCcCCCc----CEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHH--cCCCCCCCEEEecCC
Confidence 6789999999999 665 9999999999999998 899999999999988632 358999999999999
Q ss_pred CCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 029924 84 KLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVH 163 (185)
Q Consensus 84 ~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~ 163 (185)
+| ||||+|+|.|+. .+.+.|++||++||+. .+|||||+||||++|||++++|+++++++++ .+|+
T Consensus 111 ~L---~VIHtVGP~~~~--~~~~~L~~~y~~~L~~-----~~SIAfPaIstGi~G~P~~~aa~ial~~v~~-----~~V~ 175 (193)
T 3ejg_A 111 SL---RIFNVVGPRKGK--HERDLLIKAYNTINNE-----QGTPLTPILSCGIFGIKLETSLEVLLDVCNT-----KEVK 175 (193)
T ss_dssp TE---EEEEEECCCSST--THHHHHHHHHHHHHHS-----SSCEEECCTTCGGGCCCHHHHHHHHHHHCCS-----SCEE
T ss_pred Ce---eEEEecCCCCCc--hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc-----CeEE
Confidence 99 999999999965 5788999999999983 3799999999999999999999999999987 4899
Q ss_pred EEecChHHHHHHHHHHH
Q 029924 164 FILFTDDIYNVWLKKAK 180 (185)
Q Consensus 164 ~v~~~~~~~~~f~~~~~ 180 (185)
||+|+++++++|++.+.
T Consensus 176 fv~f~~~~~~~~~~~l~ 192 (193)
T 3ejg_A 176 VFVYTDTEVCKVKDFVS 192 (193)
T ss_dssp EEECSHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHhc
Confidence 99999999999998764
No 15
>3ejf_A Non-structural protein 3; IBV, coronavirus, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting; 1.60A {Avian infectious bronchitis virus} PDB: 3eke_A* 3ewo_A 3ewp_A*
Probab=100.00 E-value=1.6e-40 Score=254.34 Aligned_cols=163 Identities=18% Similarity=0.180 Sum_probs=136.2
Q ss_pred eeeEeeeCCCcEEEEEEccccccccCC----CCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCC
Q 029924 4 KVQTLSFSTKTSLKISKGDISRWCVDR----SSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPP 74 (185)
Q Consensus 4 ~~~~~~~~~~~~i~i~~GDI~~~~~~~----~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~ 74 (185)
+.++...+++.+|++++||||++++|. ++|||||+||+.|.+++| ++++|++|++||+++++. .++++
T Consensus 4 ~~~~~~~~~~~~i~v~~GDIt~~~vDa~~~~~~DaIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~~~~~--~g~~~- 80 (176)
T 3ejf_A 4 APATCEKPKFLEYKTCVGDLTVVIAKALDEFKEFCIVNAANEHMTHGSGVAKAIADFCGLDFVEYCEDYVKK--HGPQQ- 80 (176)
T ss_dssp ------CCSSCEEEEEESCHHHHHHHHHHHHSSEEEEEECCTTCCCCSHHHHHHHHHHCHHHHHHHHHHHHH--HCCCS-
T ss_pred CcccccCCCCceEEEEeeeCeEEeecccccCCCCEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHh--cCCCC-
Confidence 456777889999999999999998743 568899999999999998 999999999999998643 24566
Q ss_pred CcEEEccCCCCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHH
Q 029924 75 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKE 154 (185)
Q Consensus 75 G~~~~T~~~~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~ 154 (185)
+++|.++.|++++|||+|+|.|... ++++.|++||++||+ ++++|||||+||||++|||++++|++|+++++.
T Consensus 81 --a~iT~G~~l~t~~VIHtVGP~~~~~-~~~~~L~~~y~~~L~----~~~~SIAfPaIstGi~g~P~~~aA~ia~~~v~~ 153 (176)
T 3ejf_A 81 --RLVTPSFVKGIQCVNNVVGPRHGDN-NLHEKLVAAYKNVLV----DGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEG 153 (176)
T ss_dssp --EEEECCCSTTEEEEEEECCCCTTCS-CHHHHHHHHHHTTCC----TTCCEEEEECCCTTSTTCCHHHHHHHHHHHHTT
T ss_pred --eeecccccccCCEEEEeCCCCCCCc-cHHHHHHHHHHHHHH----cCCcEEEECccccCCCCCCHHHHHHHHHHHhhh
Confidence 8999999999999999999999654 567899999999998 999999999999999999999999999999984
Q ss_pred HhcCCCeEEEEecChHHHHHHHHHH
Q 029924 155 FANDFKEVHFILFTDDIYNVWLKKA 179 (185)
Q Consensus 155 ~~~~l~~V~~v~~~~~~~~~f~~~~ 179 (185)
..-+|.++.+|++.+++|+...
T Consensus 154 ---~~v~v~~~~~D~e~~~~~~~~~ 175 (176)
T 3ejf_A 154 ---CTIRVLLFSLSQEHIDYFDVTC 175 (176)
T ss_dssp ---CCCEEEEEESCHHHHHHHHHTC
T ss_pred ---cceEEEEEcCCHHHHHHHHHHh
Confidence 2224455555688899998753
No 16
>2acf_A Replicase polyprotein 1AB; ADRP domain, SARS NSP-3, APPR-1-P phosphatase, structural GE joint center for structural genomics, JCSG; 1.40A {Sars coronavirus TOR2} SCOP: c.50.1.2 PDB: 2fav_A*
Probab=100.00 E-value=2.4e-40 Score=255.27 Aligned_cols=148 Identities=22% Similarity=0.288 Sum_probs=132.1
Q ss_pred CcEEEEEEcccccc----ccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCC
Q 029924 13 KTSLKISKGDISRW----CVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGF 83 (185)
Q Consensus 13 ~~~i~i~~GDI~~~----~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~ 83 (185)
+.+|++++||||++ ++ |||||+||+.|.+|+| ++++|++|++||+++.+. .+++++|++++|+++
T Consensus 19 ~~~i~i~~GDIt~~~~~~~v----DAIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT~~~ 92 (182)
T 2acf_A 19 TDNVAIKCVDIVKEAQSANP----MVIVNAANIHLKHGGGVAGALNKATNGAMQKESDDYIKL--NGPLTVGGSCLLSGH 92 (182)
T ss_dssp SSSEEEEESCHHHHHHHHCC----SEEEEECCTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHH--HCCCCTTCEEEEECT
T ss_pred CCeEEEEeCcccccccCCCC----CEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHH--cCCCCCCcEEEeeCC
Confidence 67899999999999 65 9999999999999998 899999999999987642 358999999999999
Q ss_pred CCCCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 029924 84 KLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVH 163 (185)
Q Consensus 84 ~L~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~ 163 (185)
+|+ +||||+++|.|+.+. +.+.|++||+++ ++++|||||+||||++|||++++|++|++++++ +|+
T Consensus 93 ~L~-~~VIH~vgP~~~~~~-~~~~L~~~y~~~------~~~~SIAfP~IstGi~G~p~~~aa~i~~~~v~~------~V~ 158 (182)
T 2acf_A 93 NLA-KKCLHVVGPNLNAGE-DIQLLKAAYENF------NSQDILLAPLLSAGIFGAKPLQSLQVCVQTVRT------QVY 158 (182)
T ss_dssp TTC-SEEEEECCCCGGGTC-CTTHHHHHHHGG------GGSSEEEECCTTCGGGCCCHHHHHHHHHHHCCS------EEE
T ss_pred CCC-ceEEEECCCCCCCCc-hHHHHHHHHHHh------cCCCEEEECCcccCCCCCCHHHHHHHHHHHHhC------cEE
Confidence 995 899999999998653 467999999986 799999999999999999999999999999875 999
Q ss_pred EEecChHHHHHHHHHHHHHh
Q 029924 164 FILFTDDIYNVWLKKAKELL 183 (185)
Q Consensus 164 ~v~~~~~~~~~f~~~~~~~~ 183 (185)
||+|+++ .|.+.++.||
T Consensus 159 ~v~~d~~---~y~~~l~~~~ 175 (182)
T 2acf_A 159 IAVNDKA---LYEQVVMDYL 175 (182)
T ss_dssp EEESCHH---HHHHHHHHHC
T ss_pred EEECCHH---HHHHHHHHhC
Confidence 9999998 5556666666
No 17
>2vri_A Non-structural protein 3; RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease; 1.8A {Human coronavirus NL63}
Probab=100.00 E-value=2.1e-39 Score=248.78 Aligned_cols=152 Identities=23% Similarity=0.235 Sum_probs=135.3
Q ss_pred CcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
+.+|++++||||++..+.++|||||++|+.+.+|+| ++++|++|++||+++.+. .+++++|++++|++++|
T Consensus 16 ~~~i~i~~GDIt~~~~~~~~DaIVNaaN~~l~~ggGv~~AI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT~~~~l-- 91 (174)
T 2vri_A 16 YKNVKFYLGDISHLVNCVSFDFVVNAANENLLHGGGVARAIDILTEGQLQSLSKDYISS--NGPLKVGAGVMLECEKF-- 91 (174)
T ss_dssp ETTEEEEESCHHHHTTTSCCSEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHH--HCSCCTTCEEEEECSSC--
T ss_pred CCeEEEEeccccccccCCCccEEEECCCccCCCCCcHhHHHHHHhhHHHHHHHHHHHHh--cCCCCCCeEEEEECCCC--
Confidence 678999999999983222359999999999999998 899999999999987632 35899999999999998
Q ss_pred CeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEec
Q 029924 88 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILF 167 (185)
Q Consensus 88 k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~~v~~ 167 (185)
||||+++|.|... +.+.|++||+++|++ .+|||||+||||++|||++++|++|++++++ ++|+||+|
T Consensus 92 -~VIH~vgP~~~~~--~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~-----~~V~~v~f 158 (174)
T 2vri_A 92 -NVFNVVGPRTGKH--EHSLLVEAYNSILFE-----NGIPLMPLLSCGIFGVRIENSLKALFSCDIN-----KPLQVFVY 158 (174)
T ss_dssp -EEEEEECCCSSTT--HHHHHHHHHHHHHHS-----SSCEEEECSSCGGGCCCHHHHHHHHHTSCCC-----SCEEEEEC
T ss_pred -EEEEEcCCCCCcc--hHHHHHHHHHHHHhh-----CCcEEeCccccCCCCCCHHHHHHHHHHHHhh-----CcEEEEEc
Confidence 9999999999643 778999999999985 2499999999999999999999999998876 68999999
Q ss_pred ChHHHHHHHHHHHH
Q 029924 168 TDDIYNVWLKKAKE 181 (185)
Q Consensus 168 ~~~~~~~f~~~~~~ 181 (185)
+++.+++|.++|++
T Consensus 159 ~~~~~~~~~~~l~~ 172 (174)
T 2vri_A 159 SSNEEQAVLKFLDG 172 (174)
T ss_dssp SHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999865
No 18
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=100.00 E-value=7.8e-36 Score=243.73 Aligned_cols=159 Identities=17% Similarity=0.129 Sum_probs=131.5
Q ss_pred CCcEEEEEEcccccc--------c-cCCCCcEEEEccCCCCCCCch-----hhhh-CHHHHHHHhhccccCCCCCCCCCc
Q 029924 12 TKTSLKISKGDISRW--------C-VDRSSDAIVSPTNEILLLGGF-----TAAA-GPDLQKACYQIPEAQPRVRCPPGE 76 (185)
Q Consensus 12 ~~~~i~i~~GDI~~~--------~-~~~~~D~IVn~an~~l~~~~g-----~~~~-G~~l~~e~~~~~~~~~~~~~~~G~ 76 (185)
++.+|++++||||++ . +++++||||||||+.+.+|+| ++++ |+.++++|+++.+ .+.+++|+
T Consensus 43 ~~~~i~i~~GDIt~l~~~~~~~~~~~~~~vDAIVNaANs~l~~gGGVd~AI~raaGg~~l~~ec~~~~~---~g~~~~G~ 119 (284)
T 1njr_A 43 NDKYLCIHHGHLQSLMDSMRKGDAIHHGHSYAIVSPGNSYGYLGGGFDKALYNYFGGKPFETWFRNQLG---GRYHTVGS 119 (284)
T ss_dssp --CCEEEEESCHHHHHHHHHTTCC----CCEEEEECCBTTCCCCSSHHHHHHHHHTSHHHHHHHHHHTT---TSCCCTTC
T ss_pred CCCEEEEEeCCHhhhhhhccccccccCCCccEEEeCCCCCCCCCchHHHHHHHhhCcHHHHHHHHHHHh---cCCCCCCe
Confidence 356899999999999 0 111249999999999999998 7775 5788999998762 35799999
Q ss_pred EEEccCC----------CCCCCeEEEecCCCcCCCC---------ChHHHHHHHHHHHHHHHHHcCcceeeecccccCCC
Q 029924 77 ARITPGF----------KLPVSHVIHTVGPVFNFHC---------NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVS 137 (185)
Q Consensus 77 ~~~T~~~----------~L~~k~IiH~v~P~~~~~~---------~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~ 137 (185)
+++|+++ +|+||||||+++|.|..+. .+.+.|++||+++|+.| +++++|||||+||||++
T Consensus 120 a~iT~~~~~~~~~~~~~~L~~k~VIHtvgp~~~~~~~~d~~~p~~~~~~~L~~~~~~~L~~a-e~~i~SIAfPaIsTGv~ 198 (284)
T 1njr_A 120 ATVVDLQRCLEEKTIECRDGIRYIIHVPTVVAPSAPIFNPQNPLKTGFEPVFNAMWNALMHS-PKDIDGLIIPGLCTGYA 198 (284)
T ss_dssp CEEEEGGGGGCC----CCTTEEEEEECCCBSCSSSCSCCTTCHHHHTHHHHHHHHHHHHHTS-CTTCSEEEECCTTCSTT
T ss_pred EEEEECCcccccccchhcCCCCEEEEeCCCccCCCCCcccccccccHHHHHHHHHHHHHHHH-HhCCCEEEECcccccCC
Confidence 9999999 9999999999999997652 13589999999999999 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCC-------CeEEEEecChHHHHHH
Q 029924 138 QYPPDEAATIAISTVKEFANDF-------KEVHFILFTDDIYNVW 175 (185)
Q Consensus 138 g~p~~~~a~~~l~~i~~~~~~l-------~~V~~v~~~~~~~~~f 175 (185)
|||++++|++|++++++|+... +.|+||.+ +..|+.|
T Consensus 199 G~P~~~aA~i~~~av~~f~~~~~~s~~~~~~vi~~~~-~~~~~~~ 242 (284)
T 1njr_A 199 GVPPIISCKSMAFALRLYMAGDHISKELKNVLIMYYL-QYPFEPF 242 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHT-TCCCGGG
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCcccccceEEEEEEC-HHHHHHH
Confidence 9999999999999999998631 34666666 4444443
No 19
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=100.00 E-value=2.9e-34 Score=247.89 Aligned_cols=150 Identities=19% Similarity=0.246 Sum_probs=134.4
Q ss_pred CcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
-..++|++||||+.++ |||||+||+.+.+|+| ++++|+++.+ +.+++|++++|+++ .
T Consensus 343 APsfrIIRgDITk~~v----DAIVNAANtsL~gGgGVdGAIhraaG~~ll~-----------~~~~tG~AkIT~g~---a 404 (670)
T 4gua_A 343 APSYRTKRENIADCQE----EAVVNAANPLGRPGEGVCRAIYKRWPTSFTD-----------SATETGTARMTVCL---G 404 (670)
T ss_dssp CCCEEEECSCGGGCCS----SEEEEECCTTCCCCSSHHHHHHHHCGGGGTT-----------CCCCTTCEEEEEET---T
T ss_pred CcceeEEecccccccc----CEEEeCCCCCCCCcCCHhHHHHHHhhHHHhc-----------CCCCcceEEEecCC---C
Confidence 4678999999999987 9999999999999999 8999988753 26789999999998 6
Q ss_pred CeEEEecCCCcCCCCCh--HHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCC-eEEE
Q 029924 88 SHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFK-EVHF 164 (185)
Q Consensus 88 k~IiH~v~P~~~~~~~~--~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~-~V~~ 164 (185)
|||||+|||.|+++.+. .++|++||+++|++|.+++++|||||+||||+||||++ .+++++++|.+|++..+ +|++
T Consensus 405 KyIIHtVGPvw~~g~~~E~~~lLascYrnsLkLA~e~~~kSIAFPLISTGIYG~PKd-al~IAl~~I~~fL~~~D~dV~I 483 (670)
T 4gua_A 405 KKVIHAVGPDFRKHPEAEALKLLQNAYHAVADLVNEHNIKSVAIPLLSTGIYAAGKD-RLEVSLNCLTTALDRTDADVTI 483 (670)
T ss_dssp EEEEEECCCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSSTTTTSC-CHHHHHHHHHHHHTTSSCEEEE
T ss_pred ceEEEcCCCCccCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEEccccccCCCCCHH-HHHHHHHHHHHHHhccCCEEEE
Confidence 99999999999998743 36899999999999999999999999999999999998 57999999999998554 8999
Q ss_pred EecChHHHHHHHHHHHH
Q 029924 165 ILFTDDIYNVWLKKAKE 181 (185)
Q Consensus 165 v~~~~~~~~~f~~~~~~ 181 (185)
++||++.-..++..++.
T Consensus 484 vcfDKkwe~~Ik~ai~~ 500 (670)
T 4gua_A 484 YCLDKKWKERIDAALQL 500 (670)
T ss_dssp ECSCHHHHHHHHHHHHH
T ss_pred EEecChHHHHHHHHHHH
Confidence 99999877777777664
No 20
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=99.96 E-value=5.7e-29 Score=188.29 Aligned_cols=137 Identities=11% Similarity=0.134 Sum_probs=115.3
Q ss_pred eCCCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch-----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCC
Q 029924 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF-----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFK 84 (185)
Q Consensus 10 ~~~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g-----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~ 84 (185)
++++.+|++++||||+.+. +|+|||++|+++.+|+| ++++ |++ .+|++. .+++|++++|+++
T Consensus 16 ~~~~~~i~~v~GDIt~~~~---~daIVnaaN~~~~~GgGVa~ai~~~~-p~~-~e~~~~-------~~~~G~a~it~~~- 82 (160)
T 2jyc_A 16 DPEGSRITYVKGDLFACPK---TDSLAHCISEDCRMGAGIAVLFKKKF-GGV-QELLNQ-------QKKSGEVAVLKRD- 82 (160)
T ss_dssp CCCSCSEEEEESCSSSSCS---SCEEEEEECTTCCCCSSTHHHHHHHH-CCH-HHHHHH-------CCCTTCEEEEEET-
T ss_pred cCCCceEEEEeCcCCCCCC---CCEEEEccCCcCCCCCcHHHHHHHHC-hHH-HHHhcc-------CCCCCcEEEEecC-
Confidence 3568899999999999861 39999999999999999 4555 555 577652 6889999999985
Q ss_pred CCCCeEEEecCCC-cCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 029924 85 LPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVH 163 (185)
Q Consensus 85 L~~k~IiH~v~P~-~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~ 163 (185)
.+||||+++|. |.. ..+.+.|++||+++++.|.+++++|||||.||||++|+|+++++++|.+++.+. +|.
T Consensus 83 --~~~Vih~vg~~~~~~-~~~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~~~~~~~-----~i~ 154 (160)
T 2jyc_A 83 --GRYIYYLITKKRASH-KPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEAT-----DIK 154 (160)
T ss_dssp --TEEEEEEECSSSTTS-CCCHHHHHHHHHHHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHHHHHTTS-----CCE
T ss_pred --CcEEEEEecCCCCCC-CChHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHhhC-----CCe
Confidence 69999999998 755 356789999999999999999999999999999999999999999988876542 355
Q ss_pred EEec
Q 029924 164 FILF 167 (185)
Q Consensus 164 ~v~~ 167 (185)
+++|
T Consensus 155 v~Vy 158 (160)
T 2jyc_A 155 ITVY 158 (160)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 21
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=99.96 E-value=9e-29 Score=185.30 Aligned_cols=137 Identities=12% Similarity=0.134 Sum_probs=114.7
Q ss_pred CCcEEEEEEccccccccCCCCcEEEEccCCCCCCCch----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCCC
Q 029924 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGF----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 87 (185)
Q Consensus 12 ~~~~i~i~~GDI~~~~~~~~~D~IVn~an~~l~~~~g----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~~ 87 (185)
++.+|++++||||+.+. +|+|||++|+++.+|+| ++.++|++ .+|++. .+++|++++|+++ +
T Consensus 7 ~~~~i~~v~GDIt~~~~---~daIVnaaN~~~~~G~Gva~ai~~~~p~~-~~~~~~-------~~~~G~a~it~~~---~ 72 (149)
T 2eee_A 7 GGSRITYVKGDLFACPK---TDSLAHCISEDCRMGAGIAVLFKKKFGGV-QELLNQ-------QKKSGEVAVLKRD---G 72 (149)
T ss_dssp SSCCCEEECSCSSSSCS---SCEEEEEEETTCCCCSTTHHHHHHHTCCH-HHHHTT-------CCCTTCEEEEESS---S
T ss_pred CCeeEEEEecccccCCC---CcEEEEEeCCCCCcCCcHHHHHHHHCcHH-HHHhcc-------cCCCccEEEEEcC---C
Confidence 57889999999999861 39999999999999999 44444665 567642 6889999999985 7
Q ss_pred CeEEEecCCC-cCCCCChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEe
Q 029924 88 SHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFIL 166 (185)
Q Consensus 88 k~IiH~v~P~-~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~~v~ 166 (185)
+||||+++|. |.. ..+.+.|++||+++++.|.+++++|||||.||||++|+|+++++++|.+++.+ . +|.+++
T Consensus 73 ~~Vih~v~~~~~~~-~~~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~~~~~~----~-~i~v~V 146 (149)
T 2eee_A 73 RYIYYLITKKRASH-KPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA----T-DIKITV 146 (149)
T ss_dssp SEEEEEEEESSTTS-CCCHHHHHHHHHHHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHHHHHTT----C-CCEEEE
T ss_pred CEEEEEEecCCCCC-CCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHhcc----C-CceEEE
Confidence 9999999998 755 34678999999999999999999999999999999999999999998777653 2 355555
Q ss_pred cC
Q 029924 167 FT 168 (185)
Q Consensus 167 ~~ 168 (185)
|+
T Consensus 147 y~ 148 (149)
T 2eee_A 147 YT 148 (149)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 22
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=99.94 E-value=1.3e-26 Score=175.15 Aligned_cols=131 Identities=17% Similarity=0.097 Sum_probs=109.7
Q ss_pred cEEEEEEccccc---cccCCCCcEEEEccCCCCCCCch----hhhhCHHHHHHHhhccccCCCCCCCCCcEEEccCCCCC
Q 029924 14 TSLKISKGDISR---WCVDRSSDAIVSPTNEILLLGGF----TAAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLP 86 (185)
Q Consensus 14 ~~i~i~~GDI~~---~~~~~~~D~IVn~an~~l~~~~g----~~~~G~~l~~e~~~~~~~~~~~~~~~G~~~~T~~~~L~ 86 (185)
-.|++++||||+ .++ |+|||++|+.+.+|+| ++.++|++.+++++..+. .+++++|++.+|+++ +
T Consensus 4 M~i~~v~GDit~~~~~~~----daIvn~~N~~~~~G~Gva~ai~~~~p~~~~~~~~~~~~--~~~~~~G~~~i~~~~--~ 75 (158)
T 2fg1_A 4 MEILYIKGDATAPIGSGV----KVITHICNDIGGWGKGFVLALSKKWKMPEEAYRQWYKS--QEEFTLGAVQFVNVE--N 75 (158)
T ss_dssp CCCEEEESCTTSCCSSSC----EEEEEEEETTCCCCSTHHHHHHHHCSHHHHHHHHHHHH--TSSCSTTCEEEEEEE--T
T ss_pred eEEEEEecccCCCCCCCC----eEEEEEecCCCCcCccHHHHHHHHCChHHHHHHHHHhh--ccCcCCccEEEEecC--C
Confidence 468999999999 554 9999999999999999 555568888887665432 247899999999984 2
Q ss_pred CCeEEEecCCC-cCCCC-C----hHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHH
Q 029924 87 VSHVIHTVGPV-FNFHC-N----PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK 153 (185)
Q Consensus 87 ~k~IiH~v~P~-~~~~~-~----~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~ 153 (185)
.+||||+++|. |..+. . ..+.|++|++++++.|.+++. |||||.||||++|+|++++++++.+.+.
T Consensus 76 ~~~Vi~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~a~~~~~-sIa~P~Ig~G~~G~~w~~v~~ii~~~l~ 147 (158)
T 2fg1_A 76 KLYVANMIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKA-SVHMPRIGCGLAGGKWELMEQIIKEELI 147 (158)
T ss_dssp TEEEEEEEEESSSSCCTTCCCSBCHHHHHHHHHHHHHHHHHHTC-EEEECCTTCSTTCCCHHHHHHHHHHHTG
T ss_pred CeEEEEEEEEcccCCCCCCCccccHHHHHHHHHHHHHHHHHhCC-eEEecCcCCCCCCCCHHHHHHHHHHHhc
Confidence 49999999998 76443 1 578999999999999999997 9999999999999999999998766544
No 23
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=99.27 E-value=1.3e-11 Score=100.08 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=79.8
Q ss_pred eEEEecCCCcCCCC------ChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHH---HHhcCC
Q 029924 89 HVIHTVGPVFNFHC------NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVK---EFANDF 159 (185)
Q Consensus 89 ~IiH~v~P~~~~~~------~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~---~~~~~l 159 (185)
-||.++.|+|..-. ...+.|+..++.+|..|.++|+++|+||++|||.||.|++++|+++.+.+. +|...+
T Consensus 171 ~vit~aApn~~~~~~~~~~~~~~~~l~~rir~vL~iA~~~g~~~LVLGA~GCGvfgnpp~~VA~~~~~vL~~~~~f~~~f 250 (277)
T 3sig_A 171 AFLTSPAPNRRAIGDLRTVEEIGRVLRGRAAKVLAAARHHGHRRLVLGAWGCGVFGNDPAQVAETFAGLLLDGGPFAGRF 250 (277)
T ss_dssp EEEEECCCCHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHSTTCTTTTTC
T ss_pred EEEEecCCCCccccCccchHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCcCCCCHHHHHHHHHHHHhhcchhcCCc
Confidence 37888888874211 125789999999999999999999999999999999999999999999998 466689
Q ss_pred CeEEEEecCh----HHHHHHHHHHHH
Q 029924 160 KEVHFILFTD----DIYNVWLKKAKE 181 (185)
Q Consensus 160 ~~V~~v~~~~----~~~~~f~~~~~~ 181 (185)
++|.|.++|+ ..+++|.++|.+
T Consensus 251 ~~VvFAv~d~~~~~~n~~~F~~~F~~ 276 (277)
T 3sig_A 251 AHVVFAVWDTAPGAPRHAAFARRFGS 276 (277)
T ss_dssp SEEEEECCCCSTTCHHHHHHHHHC--
T ss_pred eEEEEEEecCCCcchHHHHHHHHHhh
Confidence 9999999997 689999998875
No 24
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=59.19 E-value=13 Score=28.81 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 109 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 109 ~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
...+++++..|.+.|++.+++=++|++++.=|.+++ ..+++-+.+++.
T Consensus 33 ~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp~~Ev-~~Lm~l~~~~l~ 80 (227)
T 2vg0_A 33 AAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDEL-AALIEIITDVVE 80 (227)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEETGGGGSCHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecccccCCCHHHH-HHHHHHHHHHHH
Confidence 567888888889999999999999999999999988 455566666654
No 25
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=47.30 E-value=20 Score=27.66 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHh
Q 029924 109 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 156 (185)
Q Consensus 109 ~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~ 156 (185)
...++++++.|.+.|++.+++=++||.++.=|++++... ++-+.+++
T Consensus 36 ~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~L-m~L~~~~l 82 (225)
T 3ugs_B 36 VKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFI-FELLDRCL 82 (225)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHH-HHHHHHHH
Confidence 456677788888999999999999999999999988654 44445554
No 26
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=41.32 E-value=27 Score=27.46 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHH
Q 029924 107 ILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATI 147 (185)
Q Consensus 107 ~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~ 147 (185)
.=...++++++.|.+.|++.+++=++|+.++.=|.+++...
T Consensus 52 ~G~~~~~~iv~~c~~lGI~~lTlYaFStENwkRp~~EV~~L 92 (256)
T 4h8e_A 52 EGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYI 92 (256)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEEEETTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEEchhhhCCCHHHHHHH
Confidence 33466778888889999999999999999999999988644
No 27
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=40.24 E-value=29 Score=25.34 Aligned_cols=44 Identities=16% Similarity=0.096 Sum_probs=26.5
Q ss_pred CCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecc
Q 029924 87 VSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 131 (185)
Q Consensus 87 ~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~ 131 (185)
++.|||++++.|.... ....-.....++++.|.+.+.+.+.+-.
T Consensus 68 ~d~vi~~a~~~~~~~~-~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 ADAVISAFNPGWNNPD-IYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp CSEEEECCCC-------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEeCcCCCCChh-HHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 6899999998875542 1112234567788888888887777643
No 28
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=36.71 E-value=1.5e+02 Score=25.62 Aligned_cols=53 Identities=8% Similarity=0.083 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHcCcceeee----c-ccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 105 EDILRSAYKNCLSVGKANNIQYIAF----P-AISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 105 ~~~L~~~~~~~L~~a~~~~~~SIaf----P-~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
+..++..++++++.+.+.|+..+=+ | .......|+|.+.+.+++++++.++.+
T Consensus 195 ~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~ 252 (508)
T 3lgd_A 195 APVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVE 252 (508)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 5688899999999999999987643 3 344434579999999999999998875
No 29
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=35.69 E-value=27 Score=27.41 Aligned_cols=49 Identities=14% Similarity=0.110 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHh
Q 029924 107 ILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 156 (185)
Q Consensus 107 ~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~ 156 (185)
.=...++++++.|.+.|++.+++=++|+.++.=|++++...| +-+.+++
T Consensus 45 ~G~~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm-~L~~~~l 93 (253)
T 3sgv_B 45 AGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALM-ELFVWAL 93 (253)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECC-----------CHHHH-HHHHTTH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHH-HHHHHHH
Confidence 345677888888899999999999999999999998885443 3334433
No 30
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=34.97 E-value=1e+02 Score=20.75 Aligned_cols=24 Identities=0% Similarity=-0.018 Sum_probs=17.2
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 72 k~~vyl~d~~~~~~~n~~~~~~f~ 95 (124)
T 1qd9_A 72 KATVFIADMEQFAEVNEVYGQYFD 95 (124)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHSS
T ss_pred EEEEEEcChHHHHHHHHHHHHHcC
Confidence 455556666778888888888874
No 31
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=34.89 E-value=1.5e+02 Score=22.50 Aligned_cols=62 Identities=10% Similarity=-0.023 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 029924 106 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILFT 168 (185)
Q Consensus 106 ~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~~v~~~ 168 (185)
+.....++++++.|.+.|.+.|..|..|. ..+.+.+..-+.+.+.+++..+..++|.+++-+
T Consensus 109 ~~~~~~~~~~i~~A~~lG~~~v~~~~~g~-~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn 170 (290)
T 2zvr_A 109 KKAIERVVKHTEVAGMFGALVIIGLVRGR-REGRSYEETEELFIESMKRLLELTEHAKFVIEP 170 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEESGGGCC-CTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCC-CCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEe
Confidence 45567789999999999999998554332 234566777677777777665422226666543
No 32
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=34.31 E-value=1.1e+02 Score=20.76 Aligned_cols=24 Identities=0% Similarity=-0.042 Sum_probs=17.7
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 73 k~~vyl~d~~~~~~~n~~~~~~f~ 96 (128)
T 1qu9_A 73 KTTVFVKDLNDFATVNATYEAFFT 96 (128)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHHH
T ss_pred EEEEEEcCHHHHHHHHHHHHHHcC
Confidence 555666677778888888888873
No 33
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=33.67 E-value=84 Score=21.26 Aligned_cols=24 Identities=8% Similarity=0.005 Sum_probs=17.8
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+.+.+..+.+.+.++|.
T Consensus 73 k~~vyl~d~~~~~~~n~v~~~~f~ 96 (125)
T 3l7q_A 73 KTTCFLSDIDDFVPFNEVYATAFK 96 (125)
T ss_dssp EEEEEESCGGGHHHHHHHHHTTCC
T ss_pred EEEEEEcCHHHHHHHHHHHHHHcC
Confidence 555566677778888888888874
No 34
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=32.51 E-value=1.1e+02 Score=20.86 Aligned_cols=24 Identities=8% Similarity=-0.111 Sum_probs=18.1
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+.+.+..+.+.+.++|.
T Consensus 70 k~tvyl~d~~df~~~n~v~~~~f~ 93 (128)
T 3kjj_A 70 DAVIYLRDMGDYAEMNGVWDAWVA 93 (128)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHSC
T ss_pred EEEEEECCHHHHHHHHHHHHHHhC
Confidence 555666677778888888888884
No 35
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=32.09 E-value=1.6e+02 Score=21.91 Aligned_cols=52 Identities=6% Similarity=-0.006 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 106 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 106 ~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
+.....++++++.|.+.|.+.|.++.=.......+.+..-+.+.+.+++..+
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~ 130 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLP 130 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 4455678899999999999999987411111235666666666666666543
No 36
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=31.34 E-value=48 Score=26.44 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHH
Q 029924 108 LRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATI 147 (185)
Q Consensus 108 L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~ 147 (185)
=...++++++.|.+.|++.+++=++|+.++.=|.+++...
T Consensus 84 G~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~L 123 (284)
T 2vg3_A 84 GEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFL 123 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHH
Confidence 3477888888999999999999999999999999987554
No 37
>3vcz_A Endoribonuclease L-PSP; virulence, pathogenesis, infectious diseases, center for STR genomics of infectious diseases, csgid, translation; HET: GOL; 1.80A {Vibrio vulnificus}
Probab=30.91 E-value=1.3e+02 Score=21.33 Aligned_cols=24 Identities=0% Similarity=-0.020 Sum_probs=17.8
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+.+.+..+.+.+.++|.
T Consensus 97 k~tvyl~d~~df~~~n~v~~~~f~ 120 (153)
T 3vcz_A 97 KMTVFVKDLNDFGTVNEVYGNFFD 120 (153)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHHH
T ss_pred EEEEEEcCchHHHHHHHHHHHHhC
Confidence 555666677778888888888873
No 38
>2b33_A Protein synthesis inhibitor, putative; putative endoribonuclease, STRU genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: d.79.1.1
Probab=29.65 E-value=1.4e+02 Score=20.73 Aligned_cols=24 Identities=8% Similarity=0.022 Sum_probs=17.5
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+.+.+..+.+.+.++|.
T Consensus 86 k~tvyl~d~~df~~~n~v~~~~f~ 109 (140)
T 2b33_A 86 KVTVFTTSMDYFQRVNEVYSRYFG 109 (140)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHHT
T ss_pred EEEEEECCchhHHHHHHHHHHHCC
Confidence 455556677778888888888884
No 39
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=29.57 E-value=39 Score=26.33 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHH
Q 029924 108 LRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATI 147 (185)
Q Consensus 108 L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~ 147 (185)
=...+++++..|.+.|++.+++=++|+.++.=|.+++...
T Consensus 44 G~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~L 83 (245)
T 2d2r_A 44 GVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFL 83 (245)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEEECC----------CHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHH
Confidence 3567888889999999999999999999999998776544
No 40
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=29.39 E-value=1.7e+02 Score=21.62 Aligned_cols=51 Identities=10% Similarity=0.234 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 106 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 106 ~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
+.....++++++.|.+.|.+.|.+.. +....+++.+..-+.+.+.+++..+
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~-g~~~~~~~~~~~~~~~~~~l~~l~~ 130 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVP-LVTEQKIVKEEIKKSSVDVLTELSD 130 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEC-CBCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEec-CCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45567788999999999999998832 2222246767776777777666543
No 41
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=29.15 E-value=32 Score=22.59 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcC
Q 029924 86 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 123 (185)
Q Consensus 86 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~ 123 (185)
+.+|+|-+.+|.+.. .++.|+.++..+.+...++|
T Consensus 51 aP~Y~i~~~~~D~k~---ge~~L~~ai~~i~~~i~~~g 85 (93)
T 2qn6_B 51 APRYRVDVVGTNPKE---ASEALNQIISNLIKIGKEEN 85 (93)
T ss_dssp TTEEEEEEEESCHHH---HHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCHHH---HHHHHHHHHHHHHHHHHHhC
Confidence 458999999888754 36788888888888877765
No 42
>1jd1_A Hypothetical 13.9 kDa protein in FCY2-PET117 intergenic region; translation inhibitor, structural genomics, PSI; 1.70A {Saccharomyces cerevisiae} SCOP: d.79.1.1
Probab=29.00 E-value=1.1e+02 Score=20.72 Aligned_cols=24 Identities=8% Similarity=0.126 Sum_probs=18.4
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+.+.+..+.+.+.++|.
T Consensus 76 k~~vyl~d~~d~~~~n~~~~~~f~ 99 (129)
T 1jd1_A 76 KVNIFLADINHFAEFNSVYAKYFN 99 (129)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHSS
T ss_pred EEEEEEcChHHHHHHHHHHHHHcC
Confidence 556666777788888888888884
No 43
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=28.84 E-value=1.4e+02 Score=20.20 Aligned_cols=25 Identities=8% Similarity=0.034 Sum_probs=18.4
Q ss_pred CeEEEEecChHHHHHHHHHHHHHhc
Q 029924 160 KEVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 160 ~~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
-++.+.+.+.+.+..+.+.+.++|.
T Consensus 75 vk~~vyl~d~~~~~~~~~v~~~~f~ 99 (127)
T 3r0p_A 75 VKLNVYLTDLANFPIVNEVMGQYFQ 99 (127)
T ss_dssp EEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 3556666677778888888888884
No 44
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=28.75 E-value=1.3e+02 Score=20.12 Aligned_cols=24 Identities=4% Similarity=0.002 Sum_probs=17.4
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 72 k~~vyl~d~~~~~~~~~~~~~~f~ 95 (124)
T 2cvl_A 72 QTTCFLADMEDFPGFNEVYARYFT 95 (124)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEEcChHHHHHHHHHHHHHcC
Confidence 455556666778888888888874
No 45
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=28.47 E-value=1.9e+02 Score=21.66 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 105 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 105 ~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
.+.....++++++.|.+.|.+.|.++. | ...+.+.+..-+.+.+.+++..+
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~~-g-~~~~~~~~~~~~~~~~~l~~l~~ 138 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAMS-G-ITEGLDRKACEETFIENFRYAAD 138 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCB-C-BCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcc-C-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 455667789999999999999998842 1 22345666677777776666554
No 46
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=28.13 E-value=66 Score=23.20 Aligned_cols=42 Identities=10% Similarity=0.071 Sum_probs=30.2
Q ss_pred CCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeec
Q 029924 86 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 130 (185)
Q Consensus 86 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP 130 (185)
.++.|||++++.|.... ...-....+++++.|.+.+ ..+.+.
T Consensus 62 ~~d~vi~~ag~~~~~~~--~~~n~~~~~~l~~a~~~~~-~~~v~~ 103 (224)
T 3h2s_A 62 SVDAVVDALSVPWGSGR--GYLHLDFATHLVSLLRNSD-TLAVFI 103 (224)
T ss_dssp TCSEEEECCCCCTTSSC--THHHHHHHHHHHHTCTTCC-CEEEEE
T ss_pred cCCEEEECCccCCCcch--hhHHHHHHHHHHHHHHHcC-CcEEEE
Confidence 36899999999876543 2234455688888888888 666665
No 47
>1x25_A Hypothetical UPF0076 protein ST0811; YJGF-like protein, archaea, structural genomics, UNK function; 2.00A {Sulfolobus tokodaii} SCOP: d.79.1.1
Probab=27.94 E-value=1.2e+02 Score=20.55 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=17.3
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 76 k~~vyl~d~~~~~~~n~~~~~~f~ 99 (128)
T 1x25_A 76 MAFVFLKDMNMFNDFNSVYAEYFK 99 (128)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEECCHHHHHHHHHHHHHHcC
Confidence 455556666778888888888874
No 48
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=27.79 E-value=2.2e+02 Score=23.18 Aligned_cols=54 Identities=11% Similarity=0.249 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCcceeee---cccccCC-----------CCCCHHHHHHHHHHHHHHHhc
Q 029924 104 PEDILRSAYKNCLSVGKANNIQYIAF---PAISCGV-----------SQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 104 ~~~~L~~~~~~~L~~a~~~~~~SIaf---P~l~tG~-----------~g~p~~~~a~~~l~~i~~~~~ 157 (185)
+.+.+++..+++++.+.+.|+..+=+ |-..+.. .|++.+.+.+.+++++++.-+
T Consensus 72 ~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~ 139 (367)
T 3iar_A 72 CREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGER 139 (367)
T ss_dssp CHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999887644 6665533 489999999999999988765
No 49
>2ewc_A Conserved hypothetical protein; YJGF proteins family, COG025 putative translation initiation inhibitor; 2.15A {Streptococcus pyogenes} SCOP: d.79.1.1
Probab=27.64 E-value=1.2e+02 Score=20.54 Aligned_cols=24 Identities=17% Similarity=0.001 Sum_probs=17.9
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 65 k~~vyl~d~~df~~~n~v~~~~f~ 88 (126)
T 2ewc_A 65 QMDCLFRDVWNIPVMEKMIKERFN 88 (126)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHST
T ss_pred EEEEEECChhHHHHHHHHHHHHcC
Confidence 555666677778888888888884
No 50
>3m1x_A Putative endoribonuclease L-PSP; structural genomics, seattle structural genomics center for infectious disease, ssgcid, unknown function; HET: FLC; 1.20A {Entamoeba histolytica} PDB: 3m4s_A 3mqw_A*
Probab=26.82 E-value=1.3e+02 Score=21.14 Aligned_cols=25 Identities=12% Similarity=0.041 Sum_probs=18.4
Q ss_pred CeEEEEecChHHHHHHHHHHHHHhc
Q 029924 160 KEVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 160 ~~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
-++.+.+.|.+.+..+.+.+.++|.
T Consensus 96 vk~tvyl~d~~df~~~n~v~~~~fg 120 (148)
T 3m1x_A 96 VKTTCLLADIKDFGVFNGIYAEAFG 120 (148)
T ss_dssp EEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred EEEEEEECCHHHHHHHHHHHHHHhC
Confidence 3555666677778888888888884
No 51
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=26.76 E-value=49 Score=25.93 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHH
Q 029924 109 RSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATI 147 (185)
Q Consensus 109 ~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~ 147 (185)
...++++++.|.+.|++.+++=++|+.++.=|.+++...
T Consensus 47 ~~~l~~iv~~c~~~GI~~lTlYaFStENwkRp~~EV~~L 85 (253)
T 3qas_B 47 AKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSAL 85 (253)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCC-------------
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEecCcccCCCHHHHHHH
Confidence 477888888999999999999999999999898877533
No 52
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=26.15 E-value=1.3e+02 Score=24.07 Aligned_cols=53 Identities=15% Similarity=0.091 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCccee--ee-cccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 104 PEDILRSAYKNCLSVGKANNIQYI--AF-PAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 104 ~~~~L~~~~~~~L~~a~~~~~~SI--af-P~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
.++.++...+++++.+.+.|+..+ -| |-..+ ..|++.+.+.+.++++++++.+
T Consensus 72 t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~-~~gl~~~~~v~~v~~~~~~a~~ 127 (326)
T 3pao_A 72 TEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHT-DRGIPFEVVLAGIRAALRDGEK 127 (326)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHH-TTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhc-cCCCCHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999885 33 65554 4679999999999999998765
No 53
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=25.96 E-value=1.2e+02 Score=20.25 Aligned_cols=26 Identities=8% Similarity=0.116 Sum_probs=18.9
Q ss_pred CCeEEEEecChHHHHHHHHHHHHHhc
Q 029924 159 FKEVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 159 l~~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
+-++.+.+.+.+.+..+.+.+.++|.
T Consensus 66 vvk~~vyl~d~~df~~~n~~~~~~f~ 91 (123)
T 2cwj_A 66 IVKVTVYITDISRFSEFNEVYREYFN 91 (123)
T ss_dssp CCEEEEEESSSSHHHHHHHHHHTTCC
T ss_pred eEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 44566666677778888888888874
No 54
>1pf5_A Hypothetical protein YJGH; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.50A {Escherichia coli} SCOP: d.79.1.1
Probab=25.53 E-value=1.6e+02 Score=19.94 Aligned_cols=24 Identities=8% Similarity=0.155 Sum_probs=17.9
Q ss_pred eEEEEecCh-HHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTD-DIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~-~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+. +.+..+.+.+.++|.
T Consensus 76 k~~vyl~d~~~~~~~~~~~~~~~f~ 100 (131)
T 1pf5_A 76 DVTSFHTDPENQFEDIMTVKNEIFS 100 (131)
T ss_dssp EEEEEESSGGGTHHHHHHHHHHHSC
T ss_pred EEEEEEcCcHHhHHHHHHHHHHHcC
Confidence 455556666 788888888888883
No 55
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=25.30 E-value=1.5e+02 Score=20.04 Aligned_cols=24 Identities=8% Similarity=0.034 Sum_probs=17.5
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 64 k~tvyl~d~~df~~~n~v~~~~f~ 87 (124)
T 3gtz_A 64 DATIFLSDKADFAAMNKAWDAWVV 87 (124)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHSC
T ss_pred EEEEEECCHHHHHHHHHHHHHHhC
Confidence 555556677778888888888874
No 56
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=25.05 E-value=1.4e+02 Score=20.35 Aligned_cols=24 Identities=8% Similarity=-0.060 Sum_probs=17.7
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+...++|.
T Consensus 81 k~~vyl~d~~~f~~~n~v~~~~f~ 104 (134)
T 3v4d_A 81 FNSIFITDWKNYAAINEIYAEFFP 104 (134)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHCC
T ss_pred EEEEEECCHHHHHHHHHHHHHHcC
Confidence 555666677778888888888874
No 57
>3i7t_A RV2704, putative uncharacterized protein; siras, YJGF/YER057C/UK114, homotrimer, quick SOAK NAI deriva unknown function; 1.93A {Mycobacterium tuberculosis}
Probab=25.02 E-value=1.5e+02 Score=20.97 Aligned_cols=51 Identities=6% Similarity=-0.098 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEecChHHHHHHHHHHHHHh
Q 029924 104 PEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFANDFKEVHFILFTDDIYNVWLKKAKELL 183 (185)
Q Consensus 104 ~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~~l~~V~~v~~~~~~~~~f~~~~~~~~ 183 (185)
-+.+.+++++|+.....+.|.+ ++.+-++.+.+.+.+.+..+.+.+.++|
T Consensus 41 ~~~Qt~~~l~ni~aiL~~aG~~------------------------------l~dVvk~tvyl~d~~df~~~n~v~~~~f 90 (149)
T 3i7t_A 41 IAAQTRDALRRIEIALGQAGAT------------------------------LADVVRTRIYVTDISRWREVGEVHAQAF 90 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC------------------------------GGGEEEEEEEESCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCC------------------------------HhHEEEEEEEECCHHHHHHHHHHHHHHc
Confidence 4667778888777666654421 1123355566667777888888888887
Q ss_pred c
Q 029924 184 Q 184 (185)
Q Consensus 184 ~ 184 (185)
.
T Consensus 91 ~ 91 (149)
T 3i7t_A 91 G 91 (149)
T ss_dssp T
T ss_pred C
Confidence 4
No 58
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=24.79 E-value=1e+02 Score=21.52 Aligned_cols=24 Identities=4% Similarity=-0.010 Sum_probs=17.1
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.+.+.+..+.+.+.++|.
T Consensus 91 k~tvyl~d~~df~~~n~v~~~~f~ 114 (143)
T 3k0t_A 91 KLNIFLTDLGHFAKVNEIMGSYFS 114 (143)
T ss_dssp EEEEEESCGGGHHHHHHHHTTTCC
T ss_pred EEEEEEcChHHHHHHHHHHHHHcC
Confidence 455556677778888888887774
No 59
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=24.72 E-value=34 Score=30.55 Aligned_cols=27 Identities=22% Similarity=0.487 Sum_probs=22.5
Q ss_pred CcEEEEEEccccccccCCCCcEEEEcc
Q 029924 13 KTSLKISKGDISRWCVDRSSDAIVSPT 39 (185)
Q Consensus 13 ~~~i~i~~GDI~~~~~~~~~D~IVn~a 39 (185)
+-+|+|++||+.+++...++|+||.--
T Consensus 410 ~dkVtVI~gd~eev~LPEKVDIIVSEw 436 (637)
T 4gqb_A 410 GSQVTVVSSDMREWVAPEKADIIVSEL 436 (637)
T ss_dssp GGGEEEEESCTTTCCCSSCEEEEECCC
T ss_pred CCeEEEEeCcceeccCCcccCEEEEEc
Confidence 567999999999987666789999754
No 60
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.34 E-value=99 Score=22.05 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCcCCCCChHHHHHHHHHHHHHHHHHcCcceeeecc
Q 029924 86 PVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 131 (185)
Q Consensus 86 ~~k~IiH~v~P~~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIafP~ 131 (185)
.++.|||++++..... ..-....+++++.|.+.+...+.+..
T Consensus 61 ~~d~vi~~ag~~~~~~----~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 61 DQNVVVDAYGISPDEA----EKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp TCSEEEECCCSSTTTT----TSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred CCCEEEECCcCCcccc----chHHHHHHHHHHHHHhcCCceEEEEe
Confidence 3689999999854321 12345667788888887777777654
No 61
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=24.19 E-value=1.5e+02 Score=24.41 Aligned_cols=54 Identities=24% Similarity=0.297 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCcceeee---cccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 104 PEDILRSAYKNCLSVGKANNIQYIAF---PAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 104 ~~~~L~~~~~~~L~~a~~~~~~SIaf---P~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
..+.+++..+++++.+.+.|+..+=+ |...+...|++.+.+.+.+++++++..+
T Consensus 90 t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~ 146 (380)
T 4gxw_A 90 RPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAAR 146 (380)
T ss_dssp SHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999887755 6666666789999999999999988765
No 62
>1qah_A Perchloric acid soluble protein; alpha-beta structure; 1.80A {Rattus norvegicus} SCOP: d.79.1.1 PDB: 1oni_A 1nq3_A
Probab=23.69 E-value=1.2e+02 Score=20.87 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=17.9
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 77 k~~vyl~d~~d~~~~n~~~~~~f~ 100 (136)
T 1qah_A 77 KTTVLLADINDFGTVNEIYKTYFQ 100 (136)
T ss_dssp EEEEEESCGGGHHHHHHHHHTTCC
T ss_pred EEEEEEccCccHHHHHHHHHHHcC
Confidence 555666677778888888888874
No 63
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=23.48 E-value=2.2e+02 Score=20.86 Aligned_cols=52 Identities=13% Similarity=0.061 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 105 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 105 ~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
.+.....++++++.|.+.|.+.|.+.. |....+++.+..-+.+.+.+++..+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~~-g~~~~~~~~~~~~~~~~~~l~~l~~ 131 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVMA-GVVPAGEDAERYRAVFIDNIRYAAD 131 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECCC-CBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECc-CCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 355667889999999999999998732 2222345666666666666666543
No 64
>3quw_A Protein MMF1; chorismate mutase fold, intact mitochondria maintenance, mitochondrial protein, protein binding; 1.75A {Saccharomyces cerevisiae}
Probab=23.30 E-value=1.6e+02 Score=20.91 Aligned_cols=25 Identities=8% Similarity=0.048 Sum_probs=18.8
Q ss_pred CeEEEEecChHHHHHHHHHHHHHhc
Q 029924 160 KEVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 160 ~~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
-++.+.+.|.+.+..+.+.+.++|.
T Consensus 99 Vkvtvyl~d~~df~~~n~v~~~~f~ 123 (153)
T 3quw_A 99 VKVNVFLADMKNFAEFNSVYAKHFH 123 (153)
T ss_dssp EEEEEEESCGGGHHHHHHHHHHHSS
T ss_pred EEEEEEECCHHHHHHHHHHHHHHcC
Confidence 3566666777788888888888884
No 65
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.30 E-value=2.2e+02 Score=21.87 Aligned_cols=48 Identities=8% Similarity=0.115 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHh
Q 029924 105 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 156 (185)
Q Consensus 105 ~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~ 156 (185)
.+.....++.+++.|.+.|.+.|.+|..... +.+...+.+.+.+++..
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~----~~~~~~~~~~~~l~~l~ 150 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMMPTI----TTHDEAKLVCDIFNQAS 150 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSCCCC----CSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCCCCC----CCHHHHHHHHHHHHHHH
Confidence 3566788999999999999999999854321 23444455555555544
No 66
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=22.88 E-value=2.7e+02 Score=21.55 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHH
Q 029924 108 LRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAA 145 (185)
Q Consensus 108 L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a 145 (185)
=...+++++..|.+.|++.+++=++|+.++.=|++++.
T Consensus 49 G~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~ 86 (249)
T 1f75_A 49 GMQTVRKITRYASDLGVKYLTLYAFSTENWSRPKDEVN 86 (249)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEC------------C
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecccccCCCHHHHH
Confidence 35678888888999999999999999999999987764
No 67
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=22.82 E-value=2.4e+02 Score=21.72 Aligned_cols=48 Identities=6% Similarity=0.131 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHh
Q 029924 105 EDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 156 (185)
Q Consensus 105 ~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~ 156 (185)
.+.....++++++.|.+.|.+.|.+|.... . ..+...+.+.+.+++..
T Consensus 109 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~---~-~~~~~~~~~~~~l~~l~ 156 (305)
T 3obe_A 109 MPKFDEFWKKATDIHAELGVSCMVQPSLPR---I-ENEDDAKVVSEIFNRAG 156 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCCC---C-SSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeCCCCC---C-CCHHHHHHHHHHHHHHH
Confidence 355667899999999999999999984322 1 23344455555555544
No 68
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=22.47 E-value=1.6e+02 Score=22.47 Aligned_cols=46 Identities=17% Similarity=0.061 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCcCCCC-ChHHHHHHHHHHHHHHHHHcCcceeeecc
Q 029924 86 PVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAFPA 131 (185)
Q Consensus 86 ~~k~IiH~v~P~~~~~~-~~~~~L~~~~~~~L~~a~~~~~~SIafP~ 131 (185)
.++.|||++++...... .....=-...+++++.|.+.+.+.+.+..
T Consensus 62 ~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 62 DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAS 108 (311)
T ss_dssp TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 47899999987543221 11122234467888888888988777643
No 69
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=21.85 E-value=48 Score=15.94 Aligned_cols=12 Identities=33% Similarity=0.839 Sum_probs=9.3
Q ss_pred hHHHHHHHHHHH
Q 029924 104 PEDILRSAYKNC 115 (185)
Q Consensus 104 ~~~~L~~~~~~~ 115 (185)
+.+.|++|+.||
T Consensus 13 spellrrcldnc 24 (26)
T 2plx_B 13 SPELLRRCLDNC 24 (26)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHhcc
Confidence 457888888877
No 70
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=21.32 E-value=1.2e+02 Score=20.44 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=16.2
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 62 k~tvyl~d~~df~~~n~v~~~~f~ 85 (122)
T 3k12_A 62 SVRILLAHREDYAGLNQVWDQWFP 85 (122)
T ss_dssp EEEEEESCGGGHHHHHHHHTTTSC
T ss_pred EEEEEEcCchHHHHHHHHHHHHhC
Confidence 455555666677778777777773
No 71
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=20.75 E-value=2.6e+02 Score=21.02 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHh
Q 029924 106 DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFA 156 (185)
Q Consensus 106 ~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~ 156 (185)
+...+.++++++.|.+.|.+.|.+|.... ..+.+.+..-+.+.+.+++..
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~-~~~~~~~~~~~~~~~~l~~l~ 153 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGYDV-YYQEANNETRRRFRDGLKESV 153 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCCSC-SSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCCC-CcCcCHHHHHHHHHHHHHHHH
Confidence 34556788999999999999999873211 123345556566666665544
No 72
>2dyy_A UPF0076 protein PH0854; putative translation initiation inhibitor, trimer, structural genomics, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=20.74 E-value=1.2e+02 Score=20.50 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHHHHHHHHcC
Q 029924 104 PEDILRSAYKNCLSVGKANN 123 (185)
Q Consensus 104 ~~~~L~~~~~~~L~~a~~~~ 123 (185)
-..+.++++.|+.....+.|
T Consensus 47 ~~~Q~~~~l~ni~~~L~~ag 66 (126)
T 2dyy_A 47 IKDQTRQVLENIKAILEAAG 66 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 35677777777766666544
No 73
>1xrg_A Putative translation initiation inhibitor, YJGF family; conserved hypothetical protein, protein structure initiative, PSI; 2.20A {Clostridium thermocellum} SCOP: d.79.1.1
Probab=20.48 E-value=1.4e+02 Score=21.17 Aligned_cols=24 Identities=4% Similarity=-0.009 Sum_probs=17.4
Q ss_pred eEEEEecChHHHHHHHHHHHHHhc
Q 029924 161 EVHFILFTDDIYNVWLKKAKELLQ 184 (185)
Q Consensus 161 ~V~~v~~~~~~~~~f~~~~~~~~~ 184 (185)
++.+.+.|.+.+..+.+.+.++|.
T Consensus 105 k~tvyl~d~~df~~~n~v~~~~f~ 128 (156)
T 1xrg_A 105 KTTVFIKDMDSFAKVNEVYAKYFS 128 (156)
T ss_dssp EEEEEESCGGGHHHHHHHHHTTCC
T ss_pred EEEEEECChHHHHHHHHHHHHHcC
Confidence 455556677778888888888874
No 74
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=20.26 E-value=2.4e+02 Score=20.02 Aligned_cols=55 Identities=15% Similarity=0.094 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHHHHHHHHcCcceeeecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 103 NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 103 ~~~~~L~~~~~~~L~~a~~~~~~SIafP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
+....+.+++.++...|.+-+.++|.+=+..-=.-....-..|..+|+.+.+-++
T Consensus 52 ~~~~vv~~av~eI~~~a~kv~~~~ivlYPyAHLSs~La~P~~A~~iL~~le~~L~ 106 (143)
T 2hl0_A 52 NPEEVSLKAIEEISKVAEQVKAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLK 106 (143)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCccCChHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999883322211223345556667777777664
No 75
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=20.01 E-value=1.6e+02 Score=23.85 Aligned_cols=53 Identities=8% Similarity=0.038 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCccee---eecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 029924 104 PEDILRSAYKNCLSVGKANNIQYI---AFPAISCGVSQYPPDEAATIAISTVKEFAN 157 (185)
Q Consensus 104 ~~~~L~~~~~~~L~~a~~~~~~SI---afP~l~tG~~g~p~~~~a~~~l~~i~~~~~ 157 (185)
.++.++...+++++.+.+.|+..+ .-|-..++ .|++.+.+.+.++++++++.+
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~-~gl~~~~~v~~v~~~~~~a~~ 130 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTS-RGVALETCVNGVANALATSEE 130 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHT-TTCCHHHHHHHHHHHHTTHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhcc-CCCCHHHHHHHHHHHHHHHhh
Confidence 467999999999999999999877 33655554 679999999999999987765
Done!