BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029925
         (185 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1QWG|A Chain A, Crystal Structure Of Methanococcus Jannaschii
           Phosphosulfolactate Synthase
          Length = 251

 Score = 39.7 bits (91), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 43  LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV-STGDWAEHLIRNGPS 101
           +ED  +  G ++D +KF  G+ +++ +  ++E +       + V   G   E+    G  
Sbjct: 28  VEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGK- 86

Query: 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144
            F E++ +C+++GF+ +E++ GS +I  E     ++  K  G 
Sbjct: 87  -FDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGF 128


>pdb|4F7C|A Chain A, Crystal Structure Of Bovine Cd1d With Bound
           C12-Di-Sulfatide
 pdb|4F7C|C Chain C, Crystal Structure Of Bovine Cd1d With Bound
           C12-Di-Sulfatide
 pdb|4F7E|A Chain A, Crystal Structure Of Bovine Cd1d With Bound
           C16:0-Alpha-Galactosyl Ceramide
          Length = 283

 Score = 30.8 bits (68), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 41  NVLEDIFESMGQFVDGLKFSGGSHSLMP--KPFIEEVVKRAHQHDVYVSTGDWAEHLIRN 98
           N+ E    +  Q  D L F G S    P   PFI+EV+K  +Q+     T  W  H I  
Sbjct: 108 NISESFLRAAFQGRDVLSFQGMSWVSAPDAPPFIQEVIKVLNQNQGTKETVHWLLHDI-- 165

Query: 99  GPSAFKEYVEDCKQVGFDTIELNV 122
               + E V    Q G   +E  V
Sbjct: 166 ----WPELVRGVLQTGKSELEKQV 185


>pdb|2FYN|B Chain B, Crystal Structure Analysis Of The Double Mutant
           Rhodobacter Sphaeroides Bc1 Complex
 pdb|2FYN|E Chain E, Crystal Structure Analysis Of The Double Mutant
           Rhodobacter Sphaeroides Bc1 Complex
 pdb|2FYN|H Chain H, Crystal Structure Analysis Of The Double Mutant
           Rhodobacter Sphaeroides Bc1 Complex
 pdb|2FYN|K Chain K, Crystal Structure Analysis Of The Double Mutant
           Rhodobacter Sphaeroides Bc1 Complex
 pdb|2FYN|N Chain N, Crystal Structure Analysis Of The Double Mutant
           Rhodobacter Sphaeroides Bc1 Complex
 pdb|2FYN|Q Chain Q, Crystal Structure Analysis Of The Double Mutant
           Rhodobacter Sphaeroides Bc1 Complex
 pdb|2QJY|B Chain B, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
           With Stigmatellin And Uq2
 pdb|2QJY|E Chain E, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
           With Stigmatellin And Uq2
 pdb|2QJY|H Chain H, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
           With Stigmatellin And Uq2
 pdb|2QJY|K Chain K, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
           With Stigmatellin And Uq2
 pdb|2QJY|N Chain N, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
           With Stigmatellin And Uq2
 pdb|2QJY|Q Chain Q, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
           With Stigmatellin And Uq2
          Length = 269

 Score = 29.6 bits (65), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 19/105 (18%)

Query: 54  VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDC--- 110
            +G+K + GS   MP P ++++V+ A  HD  V       H +    SAF  +  +    
Sbjct: 172 ANGVKTTAGSWIAMPPPLMDDLVEYADGHDASV-------HAMAEDVSAFLMWAAEPKLM 224

Query: 111 --KQVGFDTIE-LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152
             KQ GF  +  L V S+      LL        AG+K K K  V
Sbjct: 225 ARKQAGFTAVMFLTVLSV------LLYLTNKRLWAGVKGKKKTNV 263


>pdb|2QJK|B Chain B, Crystal Structure Analysis Of Mutant Rhodobacter
           Sphaeroides Bc1 With Stigmatellin And Antimycin
 pdb|2QJK|E Chain E, Crystal Structure Analysis Of Mutant Rhodobacter
           Sphaeroides Bc1 With Stigmatellin And Antimycin
 pdb|2QJK|H Chain H, Crystal Structure Analysis Of Mutant Rhodobacter
           Sphaeroides Bc1 With Stigmatellin And Antimycin
 pdb|2QJK|K Chain K, Crystal Structure Analysis Of Mutant Rhodobacter
           Sphaeroides Bc1 With Stigmatellin And Antimycin
 pdb|2QJK|N Chain N, Crystal Structure Analysis Of Mutant Rhodobacter
           Sphaeroides Bc1 With Stigmatellin And Antimycin
 pdb|2QJK|Q Chain Q, Crystal Structure Analysis Of Mutant Rhodobacter
           Sphaeroides Bc1 With Stigmatellin And Antimycin
 pdb|2QJP|B Chain B, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
           With Stigmatellin And Antimycin Inhibited
 pdb|2QJP|E Chain E, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
           With Stigmatellin And Antimycin Inhibited
 pdb|2QJP|H Chain H, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
           With Stigmatellin And Antimycin Inhibited
 pdb|2QJP|K Chain K, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
           With Stigmatellin And Antimycin Inhibited
          Length = 256

 Score = 29.6 bits (65), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 12/70 (17%)

Query: 54  VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDC--- 110
            +G+K + GS   MP P ++++V+ A  HD  V       H +    SAF  +  +    
Sbjct: 172 ANGVKTTAGSWIAMPPPLMDDLVEYADGHDASV-------HAMAEDVSAFLMWAAEPKLM 224

Query: 111 --KQVGFDTI 118
             KQ GF  +
Sbjct: 225 ARKQAGFTAV 234


>pdb|1B4E|A Chain A, X-Ray Structure Of 5-Aminolevulinic Acid Dehydratase
           Complexed With The Inhibitor Levulinic Acid
          Length = 323

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 115 FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174
           +  +E   G + IPE+ L R +  + +AG+++   F +  +  +  SD  R  G  VAR 
Sbjct: 43  YKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDG-LVARM 101

Query: 175 PRSTGMTM 182
            R    T+
Sbjct: 102 SRICKQTV 109


>pdb|1I8J|A Chain A, Crystal Structure Of Porphobilinogen Synthase Complexed
           With The Inhibitor 4,7-Dioxosebacic Acid
 pdb|1I8J|B Chain B, Crystal Structure Of Porphobilinogen Synthase Complexed
           With The Inhibitor 4,7-Dioxosebacic Acid
          Length = 323

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 115 FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174
           +  +E   G + IPE+ L R +  + +AG+++   F +  +  +  SD  R  G  VAR 
Sbjct: 43  YKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDG-LVARM 101

Query: 175 PRSTGMTM 182
            R    T+
Sbjct: 102 SRICKQTV 109


>pdb|1L6S|A Chain A, Crystal Structure Of Porphobilinogen Synthase Complexed
           With The Inhibitor 4,7-Dioxosebacic Acid
 pdb|1L6S|B Chain B, Crystal Structure Of Porphobilinogen Synthase Complexed
           With The Inhibitor 4,7-Dioxosebacic Acid
 pdb|1L6Y|A Chain A, Crystal Structure Of Porphobilinogen Synthase Complexed
           With The Inhibitor 4-Oxosebacic Acid
 pdb|1L6Y|B Chain B, Crystal Structure Of Porphobilinogen Synthase Complexed
           With The Inhibitor 4-Oxosebacic Acid
          Length = 323

 Score = 28.9 bits (63), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 115 FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174
           +  +E   G + IPE+ L R +  + +AG+++   F +  +  +  SD  R  G  VAR 
Sbjct: 43  YKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDG-LVARM 101

Query: 175 PRSTGMTM 182
            R    T+
Sbjct: 102 SRICKQTV 109


>pdb|2D2Z|A Chain A, Crystal Structure Of Soluble Form Of Clic4
 pdb|2D2Z|B Chain B, Crystal Structure Of Soluble Form Of Clic4
 pdb|2D2Z|C Chain C, Crystal Structure Of Soluble Form Of Clic4
          Length = 261

 Score = 28.5 bits (62), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 26/43 (60%)

Query: 40  HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH 82
            N +EDI  S  +F+DG + +    +L+PK  I +VV + +++
Sbjct: 165 ENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRN 207


>pdb|2AHE|A Chain A, Crystal Structure Of A Soluble Form Of Clic4.
           Intercellular Chloride Ion Channel
          Length = 267

 Score = 28.1 bits (61), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 26/43 (60%)

Query: 40  HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH 82
            N +EDI  S  +F+DG + +    +L+PK  I +VV + +++
Sbjct: 165 ENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRN 207


>pdb|2WAN|A Chain A, Pullulanase From Bacillus Acidopullulyticus
          Length = 921

 Score = 27.7 bits (60), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 11/69 (15%)

Query: 62  GSHSLMPKPFIEEVVKRAHQHDVYVSTGD----------WAEHLIRNGPSAFKEYVEDCK 111
           G H   P   ++EV+  AH  D  +              + EH  + GP   K  ++  K
Sbjct: 421 GDHEQTPANPVDEVIYEAHVRDFSIDANSGMKNKGKYLAFTEHGTK-GPDHVKTGIDSLK 479

Query: 112 QVGFDTIEL 120
           ++G  T++L
Sbjct: 480 ELGITTVQL 488


>pdb|3BWV|A Chain A, Crystal Structure Of Deoxyribonucleotidase-like Protein
          (np_764060.1) From Staphylococcus Epidermidis Atcc
          12228 At 1.55 A Resolution
 pdb|3BWV|B Chain B, Crystal Structure Of Deoxyribonucleotidase-like Protein
          (np_764060.1) From Staphylococcus Epidermidis Atcc
          12228 At 1.55 A Resolution
          Length = 180

 Score = 27.3 bits (59), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 46 IFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTG 89
          I E  G   D LK  G   +L   P  +EVVK+ ++H D+Y++T 
Sbjct: 48 IPEHEGLVXDILKEPGFFRNLDVXPHAQEVVKQLNEHYDIYIATA 92


>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
 pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
          Length = 382

 Score = 26.9 bits (58), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 65  SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG 99
           ++ PK  +E + + A +HD Y+ + +  EHL+  G
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213


>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Tryptophan
 pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Aspartate
 pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Aspartate
 pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Aspartate
 pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2 Complexed With Aspartate
 pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2
 pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 2
          Length = 385

 Score = 26.9 bits (58), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 65  SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG 99
           ++ PK  +E + + A +HD Y+ + +  EHL+  G
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213


>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
           Mutant 1
 pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
           Mutant 1
          Length = 385

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 65  SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG 99
           ++ PK  +E + + A +HD Y+ + +  EHL+  G
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213


>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 1
 pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 1
 pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 1
 pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
           Mutant 1
          Length = 385

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 65  SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG 99
           ++ PK  +E + + A +HD Y+ + +  EHL+  G
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213


>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
           Mutant 1 Complexed With Aspartate
 pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
           Mutant 1 Complexed With Aspartate
 pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
           Mutant 1
 pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
           Mutant 1
          Length = 385

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 65  SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG 99
           ++ PK  +E + + A +HD Y+ + +  EHL+  G
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213


>pdb|1NVM|A Chain A, Crystal Structure Of A Bifunctional Aldolase-Dehydrogenase
           : Sequestering A Reactive And Volatile Intermediate
 pdb|1NVM|C Chain C, Crystal Structure Of A Bifunctional Aldolase-Dehydrogenase
           : Sequestering A Reactive And Volatile Intermediate
 pdb|1NVM|E Chain E, Crystal Structure Of A Bifunctional Aldolase-Dehydrogenase
           : Sequestering A Reactive And Volatile Intermediate
 pdb|1NVM|G Chain G, Crystal Structure Of A Bifunctional Aldolase-Dehydrogenase
           : Sequestering A Reactive And Volatile Intermediate
          Length = 345

 Score = 26.9 bits (58), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK----AKPKFAVMFNKSDI 159
           K+++E  + +G DT+   + S  IP E L    +L++S G      A    A+  N  DI
Sbjct: 123 KQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMN--DI 180

Query: 160 PSDRDRAFGAYV 171
             DR RAF A +
Sbjct: 181 -RDRMRAFKAVL 191


>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
           Maleate
 pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
           Maleate
 pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
           Maleate
 pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
           Maleate
          Length = 385

 Score = 26.9 bits (58), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 65  SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG 99
           ++ PK  +E + + A +HD Y+ + +  EHL+  G
Sbjct: 179 AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213


>pdb|2E5V|A Chain A, Crystal Structure Of L-Aspartate Oxidase From
           Hyperthermophilic Archaeon Sulfolobus Tokodaii
 pdb|2E5V|B Chain B, Crystal Structure Of L-Aspartate Oxidase From
           Hyperthermophilic Archaeon Sulfolobus Tokodaii
          Length = 472

 Score = 26.6 bits (57), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 25  GVTEMRSPHYTLSSSHNVLEDIFESMG-QFVDGLKFSGG 62
           G+ ++++ +Y  S + NV+E  FES G +F + L+  GG
Sbjct: 67  GLCDVKTVNYVTSEAKNVIE-TFESWGFEFEEDLRLEGG 104


>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
 pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
 pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
 pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
          Length = 389

 Score = 26.2 bits (56), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 98  NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVM 153
           + P   KEY ++    G      N+G LE+ E       +L K  G++A PK  +M
Sbjct: 39  DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIA---EKLKKQNGIEADPKTEIM 91


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.136    0.406 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,929,439
Number of Sequences: 62578
Number of extensions: 243129
Number of successful extensions: 596
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 24
length of query: 185
length of database: 14,973,337
effective HSP length: 93
effective length of query: 92
effective length of database: 9,153,583
effective search space: 842129636
effective search space used: 842129636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)