BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029925
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O27710|PSLS_METTH Phosphosulfolactate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=comA PE=3 SV=1
Length = 258
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 17 RAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVV 76
R+ KPR+ G+T + +S+ D+ E +VD +KF G+ L + ++E V
Sbjct: 11 RSGKPRKNGITMVLDKGMGPASAR----DLMEISSDYVDFIKFGWGTLPLHRRDTVKEKV 66
Query: 77 KRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYV 136
DV G I + +EY ++ + +GF+T+E++ G++EI E R +
Sbjct: 67 DMYRSFDVEPYPGGTLFE-IAHLNDKVEEYFQEARSLGFETLEISNGTVEIETEEKCRLI 125
Query: 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167
+ G F V+ +RDR
Sbjct: 126 EMAVDEG------FMVLSEVGKKDPERDRLL 150
>sp|Q57703|PSLS_METJA Phosphosulfolactate synthase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=comA PE=1 SV=1
Length = 251
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV-STGDWAEHLIRNGPS 101
+ED + G ++D +KF G+ +++ + ++E + + V G E+ G
Sbjct: 28 VEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGK- 86
Query: 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144
F E++ +C+++GF+ +E++ GS +I E ++ K G
Sbjct: 87 -FDEFLNECEKLGFEAVEISDGSSDISLEERKNAIKRAKDNGF 128
>sp|Q1IYT4|G6PI_DEIGD Glucose-6-phosphate isomerase OS=Deinococcus geothermalis (strain
DSM 11300) GN=pgi PE=3 SV=2
Length = 562
Score = 34.3 bits (77), Expect = 0.46, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 18/110 (16%)
Query: 74 EVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133
E ++ H D++ + E L+ G + +Y ++ I +ETL
Sbjct: 26 ETMRDRHLRDLFAADPRRGERLVAEGAGVYLDYSKN----------------RITDETLR 69
Query: 134 RYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTGMTMD 183
++L + AG++A+ MF I +RA RAPR +T+D
Sbjct: 70 LLLQLAREAGVEARRD--AMFAGERINLTENRAVLHSALRAPRGAAVTVD 117
>sp|A1TEQ0|G6PI_MYCVP Glucose-6-phosphate isomerase OS=Mycobacterium vanbaalenii (strain
DSM 7251 / PYR-1) GN=pgi PE=3 SV=1
Length = 553
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 120 LNVGSL-------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVA 172
L VG L + ETL + L ++AGL AK MF+ + I + DRA
Sbjct: 42 LTVGDLYIDYSKHRVTRETLDLLLDLARTAGLPAKRD--AMFSGAHINTSEDRAVLHTAL 99
Query: 173 RAPRSTGMTMD 183
R PR +T+D
Sbjct: 100 RLPRDASLTVD 110
>sp|P54242|G6PI2_CLAXA Glucose-6-phosphate isomerase, cytosolic 2 OS=Clarkia xantiana
GN=PGIC2 PE=3 SV=1
Length = 569
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ V FD I L+ + +T+ + +L ++A LK K M+N I S +R
Sbjct: 36 ERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLAEAAHLKQK--IDRMYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR++ + D
Sbjct: 94 SVLHVALRAPRNSAICSD 111
>sp|P29333|G6PI2_CLALE Glucose-6-phosphate isomerase, cytosolic 2A OS=Clarkia lewisii
GN=PGIC2-A PE=3 SV=1
Length = 569
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ V FD I L+ + +T+ + +L ++A LK K M+N I S +R
Sbjct: 36 ERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLAEAAHLKQK--IDRMYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR++ + D
Sbjct: 94 SVLHVALRAPRNSAICSD 111
>sp|Q6P7H4|NIPA_XENLA NIPA-like protein OS=Xenopus laevis GN=zc3hc1 PE=2 SV=1
Length = 477
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 72 IEEVVKRAHQHDVYVSTGDWAEH----LIRNGPSAFKEYVEDCKQVGFDTIEL------N 121
++E +++AH+ + EH L+ S ++VE + ++L +
Sbjct: 137 LQEALRKAHEKFCFWPDSPCPEHFWALLVTEPSSVLSDFVERFHNLCHLEMQLPSLKHED 196
Query: 122 VGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSD 162
V S++I E+T+ R +RL++ + KPK N +PSD
Sbjct: 197 VKSMDITEDTVSRLLRLIED---ELKPKEGREANSHSLPSD 234
>sp|P54234|G6PI1_CLAAR Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia arcuata
GN=PGIC1 PE=3 SV=1
Length = 568
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ V FD I L+ + +T+ + +L +A LK K M+N I S +R
Sbjct: 36 ERCQSMMVEFDNIFLDYSRQQASSDTINKLYKLADAAHLKQK--IDRMYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR++ + D
Sbjct: 94 SVLHVALRAPRNSAICSD 111
>sp|Q9AF21|PSLS_XANP2 Phosphosulfolactate synthase OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=xecG PE=3 SV=2
Length = 303
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 5 YYGWKSFDEYEDR-AEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGS 63
+ G + D DR +PR+ G+T + ++ L DI ++D K + G+
Sbjct: 11 WRGVLALDAAIDRRVTQPRKRGITMVIDKGIGPAA----LADIDAVAAPYIDHWKLAFGT 66
Query: 64 HSLMPKPFIEEVVKRAHQHDVYV-STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122
+LMP + + + + V G E + + +++ +++GF +E++
Sbjct: 67 SALMPPQVLADKLAFLRERGVLTYPGGTLLEAAVVQ--QHCRVFMQRAEELGFTAVEISD 124
Query: 123 GSLEIPEETLLRYVRLVKSAGL 144
G++++P + R + + AGL
Sbjct: 125 GTIDLPRDRRRRIIDCAREAGL 146
>sp|P54240|G6PI1_CLAXA Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia xantiana
GN=PGIC1 PE=3 SV=1
Length = 568
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ V FD I L+ + +T+ + +L +A LK K M+N I S +R
Sbjct: 36 ERCQSMMVEFDNIFLDYSRQQASPDTISKLYKLADAAHLKQK--IDRMYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR++ + D
Sbjct: 94 SVLHVALRAPRNSAICSD 111
>sp|P54243|G6PI_OENME Glucose-6-phosphate isomerase, cytosolic OS=Oenothera mexicana
GN=PGIC PE=3 SV=1
Length = 568
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ V FD I L+ + +T+ + +L +A LK K M+N I S +R
Sbjct: 36 ERCQSMMVEFDNIFLDYSRQQASPDTINKLYKLADAAHLKQK--IDRMYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR++ + D
Sbjct: 94 SVLHVALRAPRNSAICSD 111
>sp|A4T6W8|G6PI_MYCGI Glucose-6-phosphate isomerase OS=Mycobacterium gilvum (strain
PYR-GCK) GN=pgi PE=3 SV=1
Length = 549
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 87 STGDW---AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-------EIPEETLLRYV 136
+T +W A H G + ++ D G + VG L + ETL V
Sbjct: 7 ATSEWQALARHRDEIGETNLRQLFADDAARGL-RFAVTVGGLYIDYSKHRVTAETLNLLV 65
Query: 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTGMTMD 183
+ ++AGL+ K MF+ I + DRA R PR +T+D
Sbjct: 66 DVARAAGLETKRD--AMFSGEHINTSEDRAVLHTALRLPRDAALTVD 110
>sp|Q5YPP1|G6PI_NOCFA Glucose-6-phosphate isomerase OS=Nocardia farcinica (strain IFM
10152) GN=pgi PE=3 SV=1
Length = 551
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 130 ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTGMTMD 183
ETL V L + AG++A MF I + DRA G R P MT+D
Sbjct: 65 ETLQLLVELAREAGVEAHRD--AMFAGEHINTSEDRAVGHVALRLPAGRTMTID 116
>sp|P54241|G6PI2_CLACO Glucose-6-phosphate isomerase, cytosolic 2 OS=Clarkia concinna
GN=PGIC2 PE=3 SV=1
Length = 569
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ V FD I L+ + +T+ + +L +A LK K M+N I S +R
Sbjct: 36 ERCQSMMVEFDNIFLDYSRQQASPDTINKLFKLADAAHLKRK--IDRMYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR++ + D
Sbjct: 94 SVLHVALRAPRNSAICSD 111
>sp|P54239|G6PI1_CLAWI Glucose-6-phosphate isomerase, cytosolic 1 OS=Clarkia williamsonii
GN=PGIC1 PE=3 SV=1
Length = 568
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 108 EDCKQ--VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165
E C+ + FD I L+ + +T+ + RL +A LK K M+N I S +R
Sbjct: 36 ERCQSMMLEFDNIFLDYSRQQASPDTISKLYRLADAAHLKQKIDH--MYNGDHINSTENR 93
Query: 166 AFGAYVARAPRSTGMTMD 183
+ RAPR+ + D
Sbjct: 94 SVLHVALRAPRNLAICSD 111
>sp|B7IP83|GPDA_BACC2 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain G9842) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|Q81FR4|GPDA_BACCR Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|B7HHQ8|GPDA_BACC4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain B4264) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|P0C064|GRSB_BREBE Gramicidin S synthase 2 OS=Brevibacillus brevis GN=grsB PE=1 SV=2
Length = 4450
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 10 SFDEYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK 69
+F + AE+ +R + + L +++NVL + + V G +G SH+
Sbjct: 2307 TFSAGKQLAEELKRLATETGTTLYMLLLAAYNVLLHKYSGQEEIVVGTPIAGRSHA---- 2362
Query: 70 PFIEEVVKRAHQHDVYVSTGDWAEHL-IRNGPSA---FKEYVEDCKQVGFDTIELNVGSL 125
DV G + L ++N P A F E++ + KQ + E +
Sbjct: 2363 -------------DVENIVGMFVNTLALKNTPIAVRTFHEFLLEVKQNALEAFE----NQ 2405
Query: 126 EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI 159
+ P E L+ +++ + L P F MF+ S+I
Sbjct: 2406 DYPFENLIEKLQVRRD--LSRNPLFDTMFSLSNI 2437
>sp|P0C063|GRSB_ANEMI Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3
SV=2
Length = 4451
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 10 SFDEYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK 69
+F + AE+ +R + + L +++NVL + + V G +G SH+
Sbjct: 2307 TFSAGKQLAEELKRLAAETGTTLYMLLLAAYNVLLHKYSGQEEIVVGTPIAGRSHA---- 2362
Query: 70 PFIEEVVKRAHQHDVYVSTGDWAEHL-IRNGPSA---FKEYVEDCKQVGFDTIELNVGSL 125
DV G + L ++N P A F E++ + KQ + E +
Sbjct: 2363 -------------DVENIVGMFVNTLALKNTPIAVRTFHEFLLEVKQNALEAFE----NQ 2405
Query: 126 EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDI 159
+ P E L+ +++ + L P F MF+ S+I
Sbjct: 2406 DYPFENLIEKLQVRRD--LSRNPLFDTMFSLSNI 2437
>sp|Q6HL50|GPDA_BACHK Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=gpsA
PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|Q63DM7|GPDA_BACCZ Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain ZK / E33L) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|C1EN02|GPDA_BACC3 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain 03BB102) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|B7JGZ0|GPDA_BACC0 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain AH820) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|A0RBW0|GPDA_BACAH Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus
thuringiensis (strain Al Hakam) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|B9IVM7|GPDA_BACCQ Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain Q1) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|B7HL15|GPDA_BACC7 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain AH187) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|P61737|GPDA_BACC1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cereus
(strain ATCC 10987) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|Q81SW8|GPDA_BACAN Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus anthracis
GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|C3L9F3|GPDA_BACAC Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|C3P592|GPDA_BACAA Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus anthracis
(strain A0248) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|A9VMB4|GPDA_BACWK Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus
weihenstephanensis (strain KBAB4) GN=gpsA PE=3 SV=1
Length = 340
Score = 30.0 bits (66), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIE 73
LE++ ESMG V+G++ + +H L K +E
Sbjct: 270 LEEVLESMGMVVEGVRTTKAAHELAEKMEVE 300
>sp|Q7NAZ6|ACKA_MYCGA Acetate kinase OS=Mycoplasma gallisepticum (strain R(low / passage
15 / clone 2)) GN=ackA PE=3 SV=2
Length = 388
Score = 30.0 bits (66), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 22/139 (15%)
Query: 7 GWKSFDEYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGG---S 63
G Y D + T++ YT + +L+ + +DGL F+ G +
Sbjct: 267 GLLGLSSYADMRDVTSNLPKTQLTLDVYTQRVADYILK-YANQINASIDGLVFTAGVGEN 325
Query: 64 HSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123
SL+ I+EVV + H V + P AF++ D +++ D +LNV
Sbjct: 326 ASLI----IQEVVNKVHLLKVSLD------------PKAFEQKYSDYRKLSDDKSQLNVY 369
Query: 124 SLEIPEETLLR--YVRLVK 140
+ EE ++ VRL K
Sbjct: 370 QVRTNEEIMIMRDVVRLSK 388
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,295,030
Number of Sequences: 539616
Number of extensions: 2928128
Number of successful extensions: 6768
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 6764
Number of HSP's gapped (non-prelim): 38
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)