Query 029926
Match_columns 185
No_of_seqs 145 out of 1034
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 09:00:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4k_A N5-carboxyaminoimidazol 100.0 2.5E-30 8.5E-35 214.1 6.6 77 109-185 19-95 (181)
2 4grd_A N5-CAIR mutase, phospho 100.0 1.5E-29 5.2E-34 208.1 7.1 77 109-185 9-85 (173)
3 1xmp_A PURE, phosphoribosylami 100.0 5.1E-29 1.7E-33 204.4 6.2 77 109-185 8-84 (170)
4 3rg8_A Phosphoribosylaminoimid 99.9 1E-28 3.6E-33 200.4 7.1 75 111-185 1-76 (159)
5 3oow_A Phosphoribosylaminoimid 99.9 6.9E-29 2.4E-33 203.0 6.0 76 110-185 3-78 (166)
6 3kuu_A Phosphoribosylaminoimid 99.9 9.4E-29 3.2E-33 203.5 6.6 76 110-185 10-85 (174)
7 3trh_A Phosphoribosylaminoimid 99.9 1.5E-28 5.2E-33 201.4 7.0 75 111-185 5-79 (169)
8 3ors_A N5-carboxyaminoimidazol 99.9 1.3E-28 4.3E-33 200.8 6.3 75 111-185 2-76 (163)
9 3lp6_A Phosphoribosylaminoimid 99.9 1.6E-28 5.5E-33 202.0 6.2 76 110-185 5-80 (174)
10 1u11_A PURE (N5-carboxyaminoim 99.9 5.5E-28 1.9E-32 200.1 6.3 74 112-185 21-94 (182)
11 1o4v_A Phosphoribosylaminoimid 99.9 6.9E-28 2.4E-32 199.6 6.0 74 112-185 13-86 (183)
12 2ywx_A Phosphoribosylaminoimid 99.9 3.6E-26 1.2E-30 185.5 5.1 69 114-185 1-69 (157)
13 2h31_A Multifunctional protein 99.9 7.3E-25 2.5E-29 199.0 7.9 75 111-185 264-339 (425)
14 3uhj_A Probable glycerol dehyd 95.0 0.03 1E-06 49.2 5.4 66 113-179 53-118 (387)
15 1jq5_A Glycerol dehydrogenase; 94.8 0.035 1.2E-06 47.4 5.3 67 113-179 32-98 (370)
16 3bfj_A 1,3-propanediol oxidore 94.1 0.075 2.6E-06 45.7 5.8 67 113-179 34-104 (387)
17 1o2d_A Alcohol dehydrogenase, 93.7 0.15 5.2E-06 43.9 6.9 67 113-179 41-110 (371)
18 3ce9_A Glycerol dehydrogenase; 93.5 0.1 3.5E-06 44.2 5.5 65 114-179 36-100 (354)
19 3okf_A 3-dehydroquinate syntha 93.3 0.22 7.5E-06 44.4 7.5 66 113-178 63-134 (390)
20 3ox4_A Alcohol dehydrogenase 2 92.9 0.12 4E-06 44.9 5.0 67 113-179 32-100 (383)
21 1rrm_A Lactaldehyde reductase; 92.5 0.11 3.7E-06 44.6 4.2 67 113-179 32-100 (386)
22 1vlj_A NADH-dependent butanol 92.2 0.32 1.1E-05 42.3 6.9 65 113-179 44-113 (407)
23 1ta9_A Glycerol dehydrogenase; 92.1 0.12 4.2E-06 46.3 4.2 65 114-179 93-157 (450)
24 1sg6_A Pentafunctional AROM po 91.9 0.28 9.5E-06 42.7 6.1 66 113-178 37-116 (393)
25 3h5o_A Transcriptional regulat 91.7 1.1 3.9E-05 35.9 9.2 88 85-175 34-126 (339)
26 3dbi_A Sugar-binding transcrip 91.6 1.3 4.5E-05 35.5 9.3 89 85-176 33-128 (338)
27 3jvd_A Transcriptional regulat 89.7 1.6 5.5E-05 35.3 8.4 88 85-176 36-128 (333)
28 3e3m_A Transcriptional regulat 89.7 2.2 7.6E-05 34.5 9.2 88 85-175 42-134 (355)
29 1oj7_A Hypothetical oxidoreduc 89.5 0.38 1.3E-05 41.8 4.8 63 113-179 51-118 (408)
30 3l49_A ABC sugar (ribose) tran 89.0 3.4 0.00012 31.8 9.4 63 112-176 5-70 (291)
31 2gru_A 2-deoxy-scyllo-inosose 88.9 1.5 5.3E-05 37.7 8.1 65 113-178 35-105 (368)
32 3lft_A Uncharacterized protein 88.7 2.6 9E-05 33.2 8.8 62 113-175 3-70 (295)
33 3ctp_A Periplasmic binding pro 88.7 2.7 9.2E-05 33.6 8.9 87 85-175 32-123 (330)
34 3hl0_A Maleylacetate reductase 88.7 0.48 1.7E-05 40.9 4.8 65 113-179 35-99 (353)
35 2o20_A Catabolite control prot 88.7 3.4 0.00012 33.0 9.5 89 85-176 35-128 (332)
36 3s99_A Basic membrane lipoprot 88.4 2.2 7.4E-05 36.8 8.7 64 112-175 26-94 (356)
37 3egc_A Putative ribose operon 88.3 3.8 0.00013 31.7 9.3 63 112-176 8-73 (291)
38 2fn9_A Ribose ABC transporter, 88.2 4.6 0.00016 31.1 9.7 64 111-176 1-67 (290)
39 2iks_A DNA-binding transcripti 87.6 4.7 0.00016 31.3 9.5 66 109-176 17-85 (293)
40 3hs3_A Ribose operon repressor 87.5 5.6 0.00019 30.8 9.8 63 111-175 9-75 (277)
41 3bil_A Probable LACI-family tr 87.0 2.5 8.6E-05 34.3 7.9 88 85-175 38-130 (348)
42 3jzd_A Iron-containing alcohol 86.7 0.69 2.4E-05 40.0 4.6 65 113-179 37-101 (358)
43 3qbe_A 3-dehydroquinate syntha 86.7 0.99 3.4E-05 39.7 5.6 65 113-178 44-114 (368)
44 3kke_A LACI family transcripti 86.6 3.4 0.00012 32.5 8.2 63 112-176 15-80 (303)
45 3miz_A Putative transcriptiona 86.5 4.1 0.00014 31.8 8.6 63 111-175 12-78 (301)
46 3kjx_A Transcriptional regulat 86.5 4.7 0.00016 32.4 9.2 69 105-175 61-132 (344)
47 1xah_A Sadhqs, 3-dehydroquinat 86.4 0.68 2.3E-05 39.4 4.3 65 113-179 32-102 (354)
48 3l6u_A ABC-type sugar transpor 86.0 8.3 0.00028 29.6 10.0 65 111-177 7-74 (293)
49 3o1i_D Periplasmic protein TOR 85.3 6 0.00021 30.5 8.9 66 112-179 5-75 (304)
50 3msz_A Glutaredoxin 1; alpha-b 85.1 2.2 7.6E-05 27.5 5.5 49 115-165 6-54 (89)
51 3brq_A HTH-type transcriptiona 85.0 7.9 0.00027 29.5 9.4 64 111-176 18-86 (296)
52 4fn4_A Short chain dehydrogena 84.4 4.5 0.00015 33.4 8.3 26 112-139 6-31 (254)
53 1byk_A Protein (trehalose oper 84.4 8.8 0.0003 29.0 9.3 61 113-175 3-66 (255)
54 1jye_A Lactose operon represso 84.0 5.2 0.00018 32.4 8.4 87 85-174 33-125 (349)
55 3m9w_A D-xylose-binding peripl 83.9 10 0.00036 29.6 9.9 63 113-177 3-68 (313)
56 2hqb_A Transcriptional activat 83.4 6.4 0.00022 31.6 8.6 61 113-175 6-71 (296)
57 3dlo_A Universal stress protei 83.4 4.3 0.00015 29.6 7.0 53 127-181 79-131 (155)
58 1dbq_A Purine repressor; trans 83.2 10 0.00034 29.1 9.3 63 112-176 7-72 (289)
59 3jy6_A Transcriptional regulat 82.8 11 0.00036 29.0 9.3 63 112-176 7-72 (276)
60 3zyw_A Glutaredoxin-3; metal b 82.6 5 0.00017 28.8 7.0 57 114-172 17-77 (111)
61 3c3k_A Alanine racemase; struc 82.5 8.7 0.0003 29.7 8.8 63 112-176 8-73 (285)
62 3o74_A Fructose transport syst 82.2 13 0.00044 28.1 9.5 63 113-177 3-68 (272)
63 1ujn_A Dehydroquinate synthase 81.9 1.2 4.1E-05 38.1 4.0 61 113-178 29-95 (348)
64 3ipz_A Monothiol glutaredoxin- 81.6 5.6 0.00019 28.1 6.8 58 113-172 18-79 (109)
65 1tjy_A Sugar transport protein 81.5 11 0.00039 29.9 9.3 64 113-178 4-71 (316)
66 3huu_A Transcription regulator 81.4 5.5 0.00019 31.2 7.3 65 109-175 19-91 (305)
67 3h75_A Periplasmic sugar-bindi 81.4 12 0.00042 29.9 9.5 62 112-175 3-70 (350)
68 2vzf_A NADH-dependent FMN redu 81.0 3.7 0.00013 31.4 6.1 59 112-174 2-76 (197)
69 2b99_A Riboflavin synthase; lu 81.0 2.1 7.1E-05 34.4 4.8 62 111-175 1-65 (156)
70 1aba_A Glutaredoxin; electron 80.8 4.4 0.00015 26.9 5.8 43 124-166 13-58 (87)
71 2dri_A D-ribose-binding protei 80.8 15 0.00051 28.2 9.5 61 113-175 2-65 (271)
72 1nvm_A HOA, 4-hydroxy-2-oxoval 80.7 3.7 0.00013 35.0 6.6 64 115-179 109-173 (345)
73 2fvy_A D-galactose-binding per 80.7 10 0.00036 29.2 8.6 63 113-176 3-68 (309)
74 1x60_A Sporulation-specific N- 80.5 8.4 0.00029 25.6 7.1 60 113-173 8-76 (79)
75 3ksm_A ABC-type sugar transpor 80.2 5.6 0.00019 30.1 6.8 61 113-175 1-67 (276)
76 2qh8_A Uncharacterized protein 80.2 6.7 0.00023 31.1 7.5 63 112-175 8-77 (302)
77 3gyb_A Transcriptional regulat 80.2 4.4 0.00015 31.0 6.3 58 112-172 5-65 (280)
78 3uug_A Multiple sugar-binding 79.5 12 0.00041 29.3 8.7 63 112-176 3-68 (330)
79 2qv7_A Diacylglycerol kinase D 79.5 7.2 0.00025 32.5 7.9 62 112-176 24-89 (337)
80 2vk2_A YTFQ, ABC transporter p 79.1 10 0.00035 29.6 8.2 62 113-176 3-67 (306)
81 2q62_A ARSH; alpha/beta, flavo 79.0 14 0.00047 30.3 9.3 59 112-174 34-105 (247)
82 3e61_A Putative transcriptiona 79.0 12 0.0004 28.6 8.3 62 112-175 8-72 (277)
83 3k9c_A Transcriptional regulat 78.9 9.1 0.00031 29.8 7.8 62 111-176 11-75 (289)
84 4eg0_A D-alanine--D-alanine li 78.4 2 6.7E-05 35.0 4.0 37 110-148 11-52 (317)
85 1nyt_A Shikimate 5-dehydrogena 78.3 14 0.00048 29.9 9.0 61 113-180 119-193 (271)
86 8abp_A L-arabinose-binding pro 78.3 17 0.00057 28.0 9.1 61 113-176 3-66 (306)
87 2khp_A Glutaredoxin; thioredox 77.7 12 0.00042 24.4 8.2 56 111-170 4-59 (92)
88 3k4h_A Putative transcriptiona 77.6 11 0.00038 28.8 7.9 64 111-176 7-78 (292)
89 1mjh_A Protein (ATP-binding do 77.5 13 0.00044 26.4 7.7 51 128-182 85-135 (162)
90 1jx6_A LUXP protein; protein-l 77.4 25 0.00085 27.8 10.5 65 112-177 43-113 (342)
91 2fep_A Catabolite control prot 77.3 18 0.00062 28.0 9.1 62 112-175 16-80 (289)
92 3tb6_A Arabinose metabolism tr 77.1 20 0.0007 27.2 9.2 62 113-176 16-80 (298)
93 3brs_A Periplasmic binding pro 77.0 21 0.00071 27.3 9.2 63 113-177 6-75 (289)
94 3iv7_A Alcohol dehydrogenase I 76.9 1.7 5.9E-05 37.7 3.4 62 114-179 39-100 (364)
95 2rgy_A Transcriptional regulat 76.8 18 0.00062 28.0 9.0 63 112-176 8-76 (290)
96 3s3t_A Nucleotide-binding prot 76.7 11 0.00036 26.2 6.9 52 128-183 71-124 (146)
97 3hgm_A Universal stress protei 76.7 15 0.00052 25.3 7.8 53 126-182 70-125 (147)
98 3u7r_A NADPH-dependent FMN red 76.7 7.1 0.00024 30.9 6.7 62 111-174 1-74 (190)
99 3rot_A ABC sugar transporter, 76.3 25 0.00086 27.3 9.7 62 113-176 4-70 (297)
100 3d02_A Putative LACI-type tran 75.3 22 0.00075 27.3 9.0 62 113-176 5-70 (303)
101 3ic4_A Glutaredoxin (GRX-1); s 75.3 12 0.0004 24.5 6.6 60 112-173 11-73 (92)
102 2klx_A Glutaredoxin; thioredox 74.6 8.1 0.00028 25.4 5.6 55 111-171 4-59 (89)
103 3gx8_A Monothiol glutaredoxin- 74.6 11 0.00037 27.4 6.8 58 113-172 16-80 (121)
104 2rjo_A Twin-arginine transloca 74.3 21 0.00073 28.3 8.9 62 113-176 6-72 (332)
105 3lkv_A Uncharacterized conserv 74.2 11 0.00039 30.3 7.4 66 112-177 8-79 (302)
106 1gud_A ALBP, D-allose-binding 73.8 28 0.00095 27.0 9.3 61 114-176 3-68 (288)
107 2ioy_A Periplasmic sugar-bindi 73.7 29 0.00098 26.7 9.6 60 114-175 3-65 (283)
108 2bon_A Lipid kinase; DAG kinas 73.7 11 0.00039 31.4 7.5 61 113-176 30-91 (332)
109 3d8u_A PURR transcriptional re 73.4 15 0.00052 27.8 7.6 61 113-175 4-67 (275)
110 2q5c_A NTRC family transcripti 72.8 3.8 0.00013 32.5 4.2 63 110-180 2-64 (196)
111 2qu7_A Putative transcriptiona 72.8 19 0.00065 27.7 8.1 61 113-176 9-72 (288)
112 3gv0_A Transcriptional regulat 72.7 14 0.00048 28.6 7.4 62 112-175 8-74 (288)
113 2yan_A Glutaredoxin-3; oxidore 72.5 15 0.00051 25.2 6.8 57 114-172 18-78 (105)
114 2wem_A Glutaredoxin-related pr 72.5 15 0.00051 26.8 7.1 58 113-172 20-82 (118)
115 4g81_D Putative hexonate dehyd 72.5 15 0.00052 30.2 7.9 26 113-140 9-34 (255)
116 3rht_A (gatase1)-like protein; 72.5 3.7 0.00013 34.5 4.2 41 113-156 5-45 (259)
117 1wik_A Thioredoxin-like protei 72.3 9.4 0.00032 26.6 5.8 57 114-172 16-76 (109)
118 3bbl_A Regulatory protein of L 72.3 12 0.0004 29.0 6.8 62 113-176 5-73 (287)
119 2dum_A Hypothetical protein PH 72.3 19 0.00064 25.8 7.5 50 128-181 80-131 (170)
120 4gqr_A Pancreatic alpha-amylas 72.3 2 6.8E-05 36.0 2.6 58 115-172 12-95 (496)
121 2fqx_A Membrane lipoprotein TM 72.3 28 0.00096 28.2 9.4 60 113-175 5-70 (318)
122 1qpz_A PURA, protein (purine n 71.8 29 0.001 27.6 9.2 62 112-175 58-122 (340)
123 3pgx_A Carveol dehydrogenase; 71.8 32 0.0011 27.1 9.4 28 111-140 13-40 (280)
124 3clh_A 3-dehydroquinate syntha 71.6 1.4 4.8E-05 37.6 1.5 64 113-178 27-96 (343)
125 2fzv_A Putative arsenical resi 70.4 21 0.00073 30.2 8.6 60 111-174 57-130 (279)
126 3clk_A Transcription regulator 70.2 15 0.00051 28.4 7.0 63 112-176 8-74 (290)
127 1nvt_A Shikimate 5'-dehydrogen 70.0 19 0.00064 29.3 7.9 59 113-179 128-205 (287)
128 3fvw_A Putative NAD(P)H-depend 69.9 24 0.00082 27.1 8.1 60 111-175 1-75 (192)
129 4eys_A MCCC family protein; MC 69.4 25 0.00086 30.3 8.9 69 110-180 3-86 (346)
130 3g1w_A Sugar ABC transporter; 69.3 31 0.0011 26.6 8.6 62 113-176 5-70 (305)
131 1t1v_A SH3BGRL3, SH3 domain-bi 69.3 11 0.00036 25.5 5.3 46 114-163 3-54 (93)
132 1uta_A FTSN, MSGA, cell divisi 69.2 6.1 0.00021 26.7 4.1 57 114-170 9-73 (81)
133 1ytb_A Protein (tata binding p 69.2 3 0.0001 33.7 2.9 87 73-161 8-117 (180)
134 3r5x_A D-alanine--D-alanine li 69.1 7.2 0.00025 31.0 5.1 56 112-175 3-63 (307)
135 2hsg_A Glucose-resistance amyl 68.7 7.2 0.00025 31.0 5.0 63 111-175 59-124 (332)
136 1yo6_A Putative carbonyl reduc 68.6 29 0.001 25.9 8.1 66 112-179 2-93 (250)
137 1m3s_A Hypothetical protein YC 68.3 20 0.00067 26.6 7.1 60 116-176 40-114 (186)
138 3h7a_A Short chain dehydrogena 68.3 27 0.00093 27.3 8.2 43 112-160 6-48 (252)
139 1ooe_A Dihydropteridine reduct 68.2 37 0.0013 25.8 8.9 64 111-178 1-83 (236)
140 4e08_A DJ-1 beta; flavodoxin-l 68.0 14 0.00046 28.0 6.2 40 110-151 3-42 (190)
141 2gm3_A Unknown protein; AT3G01 67.7 13 0.00046 26.8 5.9 50 128-181 89-138 (175)
142 3ucx_A Short chain dehydrogena 67.5 24 0.00083 27.6 7.8 28 111-140 9-36 (264)
143 3sju_A Keto reductase; short-c 67.3 22 0.00074 28.3 7.6 44 111-160 22-65 (279)
144 3sr3_A Microcin immunity prote 67.2 21 0.00073 30.6 8.0 63 114-179 15-91 (336)
145 2nx9_A Oxaloacetate decarboxyl 67.0 18 0.00062 32.8 7.8 90 82-171 64-175 (464)
146 2x7x_A Sensor protein; transfe 67.0 33 0.0011 27.1 8.5 61 113-176 7-71 (325)
147 3nrc_A Enoyl-[acyl-carrier-pro 66.8 24 0.00081 27.9 7.7 67 111-179 24-115 (280)
148 2wci_A Glutaredoxin-4; redox-a 66.8 18 0.00063 27.1 6.7 57 114-172 36-96 (135)
149 3qmx_A Glutaredoxin A, glutare 66.5 29 0.001 24.0 8.2 56 113-172 16-73 (99)
150 3imf_A Short chain dehydrogena 66.3 26 0.0009 27.3 7.8 28 111-140 4-31 (257)
151 2h3h_A Sugar ABC transporter, 66.0 29 0.00098 27.2 7.9 63 113-177 2-67 (313)
152 3gbv_A Putative LACI-family tr 66.0 36 0.0012 26.0 8.3 65 112-176 8-78 (304)
153 1jeo_A MJ1247, hypothetical pr 65.8 32 0.0011 25.3 7.8 56 116-171 43-113 (180)
154 3s40_A Diacylglycerol kinase; 65.4 15 0.00051 30.3 6.4 60 113-176 9-72 (304)
155 1mkz_A Molybdenum cofactor bio 65.3 45 0.0015 25.7 9.2 66 112-179 10-81 (172)
156 2hqb_A Transcriptional activat 65.1 35 0.0012 27.3 8.4 66 112-179 126-193 (296)
157 3idf_A USP-like protein; unive 64.9 30 0.001 23.6 7.9 50 127-182 67-116 (138)
158 3ftp_A 3-oxoacyl-[acyl-carrier 64.7 23 0.00078 28.2 7.2 28 111-140 26-53 (270)
159 2vo9_A EAD500, L-alanyl-D-glut 64.6 5.5 0.00019 31.7 3.5 55 128-184 41-96 (179)
160 3qiv_A Short-chain dehydrogena 64.6 42 0.0014 25.6 8.5 43 112-160 8-50 (253)
161 1kq3_A Glycerol dehydrogenase; 64.5 0.7 2.4E-05 39.6 -1.8 64 113-179 42-106 (376)
162 1sqs_A Conserved hypothetical 64.2 26 0.00089 27.5 7.4 58 114-175 3-87 (242)
163 1tq8_A Hypothetical protein RV 63.9 29 0.001 25.3 7.2 50 126-179 81-131 (163)
164 3tfo_A Putative 3-oxoacyl-(acy 63.8 33 0.0011 27.4 8.1 25 113-139 4-28 (264)
165 2z8u_A Tata-box-binding protei 63.6 4.5 0.00016 32.9 2.9 67 73-140 107-187 (188)
166 1mp9_A Tata-binding protein; t 63.6 3.8 0.00013 33.6 2.5 68 73-141 107-188 (198)
167 4h1h_A LMO1638 protein; MCCF-l 63.5 32 0.0011 29.2 8.3 65 114-180 14-91 (327)
168 3hcw_A Maltose operon transcri 63.4 24 0.0008 27.5 6.9 62 112-175 7-76 (295)
169 2qq5_A DHRS1, dehydrogenase/re 63.0 32 0.0011 26.7 7.7 27 111-139 3-29 (260)
170 1rm1_A Tata-box binding protei 62.3 4.2 0.00015 34.4 2.6 87 73-161 68-177 (240)
171 1u9c_A APC35852; structural ge 61.6 19 0.00063 27.8 6.0 42 110-153 3-54 (224)
172 3iwt_A 178AA long hypothetical 61.6 38 0.0013 25.7 7.7 65 112-179 15-93 (178)
173 1zem_A Xylitol dehydrogenase; 61.5 41 0.0014 26.2 8.1 27 112-140 6-32 (262)
174 2jah_A Clavulanic acid dehydro 61.4 52 0.0018 25.4 8.6 26 112-139 6-31 (247)
175 1rtt_A Conserved hypothetical 61.3 40 0.0014 25.2 7.7 61 113-175 7-80 (193)
176 3l4e_A Uncharacterized peptida 61.0 18 0.00061 28.9 6.0 48 113-162 28-79 (206)
177 3lyl_A 3-oxoacyl-(acyl-carrier 60.9 45 0.0015 25.4 8.0 28 151-178 64-93 (247)
178 1xp2_A EAD500, PLY500, L-alany 60.6 7.1 0.00024 32.0 3.6 55 128-184 41-96 (179)
179 1d4a_A DT-diaphorase, quinone 60.5 60 0.0021 26.4 9.2 36 113-148 3-42 (273)
180 3td9_A Branched chain amino ac 60.5 21 0.00072 28.3 6.3 61 112-174 149-211 (366)
181 4fs3_A Enoyl-[acyl-carrier-pro 59.9 25 0.00085 27.8 6.6 29 112-140 5-33 (256)
182 3fg9_A Protein of universal st 59.4 34 0.0012 24.1 6.6 50 128-180 81-132 (156)
183 1rqb_A Transcarboxylase 5S sub 59.4 26 0.00089 32.6 7.5 90 82-171 81-192 (539)
184 4h15_A Short chain alcohol deh 59.3 35 0.0012 27.7 7.6 66 112-181 10-92 (261)
185 3v8b_A Putative dehydrogenase, 59.1 46 0.0016 26.6 8.1 27 112-140 27-53 (283)
186 3grk_A Enoyl-(acyl-carrier-pro 59.0 38 0.0013 27.2 7.7 66 112-179 30-121 (293)
187 2cw6_A Hydroxymethylglutaryl-C 59.0 30 0.001 28.6 7.2 57 114-171 96-173 (298)
188 1fov_A Glutaredoxin 3, GRX3; a 58.9 30 0.001 21.6 7.7 47 123-171 9-55 (82)
189 3h8q_A Thioredoxin reductase 3 58.5 33 0.0011 23.9 6.4 57 114-172 18-76 (114)
190 3t7c_A Carveol dehydrogenase; 58.4 69 0.0024 25.6 9.9 27 112-140 27-53 (299)
191 2ae2_A Protein (tropinone redu 58.1 60 0.0021 25.1 8.5 28 111-140 7-34 (260)
192 1iow_A DD-ligase, DDLB, D-ALA\ 58.1 15 0.00053 28.7 5.0 40 111-152 1-45 (306)
193 3oec_A Carveol dehydrogenase ( 58.0 74 0.0025 25.8 9.3 27 112-140 45-71 (317)
194 2bd0_A Sepiapterin reductase; 58.0 58 0.002 24.5 8.6 27 152-178 69-97 (244)
195 2q5c_A NTRC family transcripti 58.0 21 0.00072 28.1 5.8 55 113-174 95-149 (196)
196 4e3z_A Putative oxidoreductase 58.0 57 0.0019 25.4 8.3 27 112-140 25-51 (272)
197 1rvv_A Riboflavin synthase; tr 57.9 25 0.00087 27.8 6.3 60 113-175 13-79 (154)
198 2h0a_A TTHA0807, transcription 57.4 26 0.00091 26.5 6.1 60 115-176 2-64 (276)
199 2pjk_A 178AA long hypothetical 57.4 37 0.0013 26.5 7.1 66 112-179 15-93 (178)
200 3pk0_A Short-chain dehydrogena 57.4 56 0.0019 25.5 8.2 43 112-160 9-51 (262)
201 3fst_A 5,10-methylenetetrahydr 57.3 39 0.0013 28.9 7.8 51 127-177 70-120 (304)
202 2wul_A Glutaredoxin related pr 57.3 40 0.0014 25.1 7.0 58 114-173 21-83 (118)
203 2z08_A Universal stress protei 57.2 41 0.0014 23.1 6.6 50 129-182 60-114 (137)
204 3loq_A Universal stress protei 57.1 68 0.0023 25.1 9.1 53 124-180 212-264 (294)
205 3gdg_A Probable NADP-dependent 57.1 41 0.0014 25.9 7.3 67 111-179 18-113 (267)
206 3op4_A 3-oxoacyl-[acyl-carrier 57.1 61 0.0021 25.1 8.3 62 112-179 8-95 (248)
207 1uzm_A 3-oxoacyl-[acyl-carrier 57.0 65 0.0022 24.9 8.5 65 111-179 13-93 (247)
208 3vup_A Beta-1,4-mannanase; TIM 56.6 28 0.00095 26.4 6.1 51 123-174 39-110 (351)
209 3rkr_A Short chain oxidoreduct 56.4 68 0.0023 24.9 8.6 44 111-160 27-70 (262)
210 4da9_A Short-chain dehydrogena 56.3 74 0.0025 25.3 9.0 27 112-140 28-54 (280)
211 1t5b_A Acyl carrier protein ph 56.3 57 0.002 24.0 9.1 38 113-150 2-44 (201)
212 2rhc_B Actinorhodin polyketide 56.3 62 0.0021 25.5 8.4 42 111-158 20-61 (277)
213 3can_A Pyruvate-formate lyase- 56.1 53 0.0018 24.2 7.5 50 123-172 107-180 (182)
214 3tjr_A Short chain dehydrogena 56.0 59 0.002 26.1 8.3 43 112-160 30-72 (301)
215 3rpe_A MDAB, modulator of drug 56.0 44 0.0015 27.1 7.6 57 113-174 26-90 (218)
216 3qk7_A Transcriptional regulat 55.9 41 0.0014 26.1 7.1 62 112-176 6-74 (294)
217 3l6e_A Oxidoreductase, short-c 55.7 55 0.0019 25.2 7.8 61 112-178 2-88 (235)
218 2fqx_A Membrane lipoprotein TM 55.6 80 0.0027 25.5 9.1 65 114-178 131-199 (318)
219 2zat_A Dehydrogenase/reductase 55.5 69 0.0024 24.7 8.4 28 111-140 12-39 (260)
220 3gvc_A Oxidoreductase, probabl 55.5 38 0.0013 27.1 7.0 62 111-178 27-114 (277)
221 3r1i_A Short-chain type dehydr 55.3 48 0.0016 26.4 7.6 28 111-140 30-57 (276)
222 3tla_A MCCF; serine protease, 55.3 21 0.0007 31.4 5.8 66 114-180 45-122 (371)
223 3ot1_A 4-methyl-5(B-hydroxyeth 55.2 29 0.00098 26.9 6.1 41 109-151 6-46 (208)
224 4e5s_A MCCFLIKE protein (BA_56 54.9 30 0.001 29.7 6.7 64 114-180 14-91 (331)
225 1ae1_A Tropinone reductase-I; 54.9 75 0.0026 24.9 8.6 28 111-140 19-46 (273)
226 3pzy_A MOG; ssgcid, seattle st 54.8 27 0.00093 26.9 5.9 65 112-179 7-78 (164)
227 4ibo_A Gluconate dehydrogenase 54.8 63 0.0021 25.6 8.2 44 111-160 24-67 (271)
228 1di6_A MOGA, molybdenum cofact 54.4 56 0.0019 26.0 7.9 66 112-179 3-78 (195)
229 1zl0_A Hypothetical protein PA 54.2 46 0.0016 28.5 7.7 66 114-180 19-93 (311)
230 2ftp_A Hydroxymethylglutaryl-C 53.9 42 0.0014 27.9 7.3 48 126-173 124-178 (302)
231 1ejb_A Lumazine synthase; anal 53.3 32 0.0011 27.6 6.2 63 113-175 17-88 (168)
232 3mt0_A Uncharacterized protein 53.3 54 0.0019 25.7 7.5 58 122-182 47-104 (290)
233 4dmm_A 3-oxoacyl-[acyl-carrier 53.2 77 0.0026 25.0 8.5 28 111-140 26-53 (269)
234 1hqk_A 6,7-dimethyl-8-ribityll 53.2 26 0.0009 27.7 5.6 60 113-175 13-79 (154)
235 3nsx_A Alpha-glucosidase; stru 53.2 39 0.0013 31.8 7.7 53 121-174 173-238 (666)
236 3tox_A Short chain dehydrogena 53.1 60 0.002 25.9 7.9 43 112-160 7-49 (280)
237 3eik_A Tata-box-binding protei 53.1 11 0.00038 31.6 3.6 86 74-161 47-155 (218)
238 3uve_A Carveol dehydrogenase ( 53.1 81 0.0028 24.7 9.9 28 111-140 9-36 (286)
239 3gaf_A 7-alpha-hydroxysteroid 53.1 70 0.0024 24.9 8.1 28 111-140 10-37 (256)
240 1geg_A Acetoin reductase; SDR 53.0 65 0.0022 24.9 7.8 26 153-178 63-90 (256)
241 2c07_A 3-oxoacyl-(acyl-carrier 53.0 82 0.0028 24.8 8.6 27 152-178 104-132 (285)
242 3nyw_A Putative oxidoreductase 53.0 62 0.0021 25.2 7.8 43 112-160 6-48 (250)
243 1yb1_A 17-beta-hydroxysteroid 52.8 78 0.0027 24.7 8.4 28 111-140 29-56 (272)
244 3t4x_A Oxidoreductase, short c 52.5 55 0.0019 25.6 7.4 43 112-160 9-51 (267)
245 3hut_A Putative branched-chain 52.4 83 0.0028 24.7 8.8 64 113-176 5-81 (358)
246 2g2c_A Putative molybdenum cof 52.3 38 0.0013 25.8 6.3 67 110-179 3-81 (167)
247 3p6l_A Sugar phosphate isomera 52.3 55 0.0019 25.1 7.3 46 123-172 88-133 (262)
248 4fc7_A Peroxisomal 2,4-dienoyl 52.0 69 0.0024 25.2 8.0 28 111-140 25-52 (277)
249 3rd5_A Mypaa.01249.C; ssgcid, 52.0 72 0.0025 25.2 8.1 61 111-179 14-98 (291)
250 3uce_A Dehydrogenase; rossmann 51.8 67 0.0023 24.2 7.6 61 112-178 5-70 (223)
251 3v2h_A D-beta-hydroxybutyrate 51.6 89 0.003 24.8 9.2 29 110-140 22-50 (281)
252 3uxy_A Short-chain dehydrogena 51.5 84 0.0029 24.8 8.4 62 112-179 27-106 (266)
253 2uvd_A 3-oxoacyl-(acyl-carrier 51.5 72 0.0025 24.4 7.8 28 151-178 64-93 (246)
254 4aie_A Glucan 1,6-alpha-glucos 51.3 31 0.0011 29.6 6.2 51 123-173 29-99 (549)
255 1qsg_A Enoyl-[acyl-carrier-pro 51.3 63 0.0021 25.1 7.5 65 113-179 9-99 (265)
256 3ble_A Citramalate synthase fr 51.1 27 0.00091 29.8 5.8 58 115-172 112-187 (337)
257 4hoj_A REGF protein; GST, glut 51.0 22 0.00075 26.4 4.7 33 126-158 13-45 (210)
258 2obx_A DMRL synthase 1, 6,7-di 51.0 25 0.00086 27.9 5.2 60 113-175 12-78 (157)
259 1lwj_A 4-alpha-glucanotransfer 51.0 39 0.0013 28.9 6.8 51 123-173 20-89 (441)
260 3rf7_A Iron-containing alcohol 50.8 11 0.00039 32.8 3.4 64 113-179 54-121 (375)
261 3osu_A 3-oxoacyl-[acyl-carrier 50.8 82 0.0028 24.2 8.3 29 151-179 64-94 (246)
262 3e03_A Short chain dehydrogena 50.7 89 0.003 24.5 9.1 64 111-178 4-101 (274)
263 2ab0_A YAJL; DJ-1/THIJ superfa 50.7 37 0.0013 26.1 6.1 40 111-152 1-40 (205)
264 1xq1_A Putative tropinone redu 50.7 82 0.0028 24.1 8.3 27 111-139 12-38 (266)
265 4b4u_A Bifunctional protein fo 50.7 18 0.00062 31.6 4.7 52 127-183 162-238 (303)
266 3u5t_A 3-oxoacyl-[acyl-carrier 50.3 89 0.003 24.7 8.4 27 112-140 26-52 (267)
267 2l82_A Designed protein OR32; 50.1 78 0.0027 25.2 7.9 61 116-176 29-112 (162)
268 3orf_A Dihydropteridine reduct 49.9 84 0.0029 24.3 8.0 62 113-178 22-98 (251)
269 4imr_A 3-oxoacyl-(acyl-carrier 49.8 59 0.002 25.8 7.3 28 111-140 31-58 (275)
270 2ct6_A SH3 domain-binding glut 49.8 31 0.0011 24.3 5.1 45 114-162 9-59 (111)
271 3sho_A Transcriptional regulat 49.8 74 0.0025 23.3 8.0 57 115-171 41-118 (187)
272 1p77_A Shikimate 5-dehydrogena 49.8 54 0.0019 26.4 7.2 59 114-179 120-192 (272)
273 2z1k_A (NEO)pullulanase; hydro 49.5 35 0.0012 29.3 6.3 52 123-174 47-117 (475)
274 1ais_A TBP, protein (tata-bind 49.3 23 0.00078 28.4 4.8 88 73-162 12-123 (182)
275 3p19_A BFPVVD8, putative blue 49.3 95 0.0033 24.5 8.5 64 112-179 15-99 (266)
276 2dxa_A Protein YBAK; trans-edi 49.1 7.9 0.00027 29.3 1.9 52 122-173 2-57 (166)
277 3sx2_A Putative 3-ketoacyl-(ac 49.0 92 0.0032 24.2 9.2 28 111-140 11-38 (278)
278 1di0_A Lumazine synthase; tran 48.9 27 0.00094 27.7 5.1 60 113-175 11-77 (158)
279 1ydn_A Hydroxymethylglutaryl-C 48.9 30 0.001 28.4 5.5 49 124-172 118-173 (295)
280 3n74_A 3-ketoacyl-(acyl-carrie 48.8 80 0.0027 24.2 7.7 63 111-179 7-95 (261)
281 4dqx_A Probable oxidoreductase 48.8 95 0.0032 24.6 8.4 63 110-178 24-112 (277)
282 1xkq_A Short-chain reductase f 48.7 88 0.003 24.5 8.1 27 112-140 5-31 (280)
283 4eso_A Putative oxidoreductase 48.7 94 0.0032 24.2 8.4 62 112-179 7-94 (255)
284 2pd4_A Enoyl-[acyl-carrier-pro 48.7 63 0.0021 25.3 7.2 66 112-179 5-96 (275)
285 3oid_A Enoyl-[acyl-carrier-pro 48.7 89 0.003 24.4 8.1 28 151-178 64-93 (258)
286 1e7w_A Pteridine reductase; di 48.5 83 0.0028 25.0 8.0 60 111-175 7-67 (291)
287 4gpa_A Glutamate receptor 4; P 48.5 81 0.0028 24.8 7.8 63 113-176 131-193 (389)
288 3lzd_A DPH2; diphthamide biosy 48.4 27 0.00091 31.3 5.5 55 113-175 265-322 (378)
289 3l77_A Short-chain alcohol deh 48.1 79 0.0027 23.8 7.5 24 114-139 3-26 (235)
290 3o21_A Glutamate receptor 3; p 48.1 93 0.0032 25.6 8.4 63 113-175 131-193 (389)
291 4dry_A 3-oxoacyl-[acyl-carrier 47.6 29 0.001 27.7 5.2 27 112-140 32-58 (281)
292 3ai3_A NADPH-sorbose reductase 47.6 95 0.0032 23.9 8.2 27 112-140 6-32 (263)
293 4fo4_A Inosine 5'-monophosphat 47.4 1E+02 0.0035 26.9 9.0 91 72-166 46-146 (366)
294 1mp9_A Tata-binding protein; t 47.4 25 0.00085 28.7 4.8 88 73-162 16-127 (198)
295 3l4y_A Maltase-glucoamylase, i 47.3 52 0.0018 32.2 7.7 52 122-174 301-365 (875)
296 2dtx_A Glucose 1-dehydrogenase 47.2 1E+02 0.0035 24.1 8.7 64 112-179 7-86 (264)
297 3un1_A Probable oxidoreductase 47.1 1E+02 0.0035 24.2 8.4 64 112-179 27-108 (260)
298 3gem_A Short chain dehydrogena 46.9 55 0.0019 25.8 6.7 64 111-178 25-110 (260)
299 1dhr_A Dihydropteridine reduct 46.7 94 0.0032 23.7 7.8 62 113-178 7-87 (241)
300 1w0m_A TIM, triosephosphate is 46.6 39 0.0013 27.9 5.9 44 132-175 78-122 (226)
301 1yx1_A Hypothetical protein PA 46.6 46 0.0016 25.8 6.0 47 114-163 100-151 (264)
302 1oaa_A Sepiapterin reductase; 46.5 88 0.003 24.0 7.7 28 152-179 71-104 (259)
303 3tem_A Ribosyldihydronicotinam 46.4 92 0.0031 24.8 8.0 35 113-147 2-40 (228)
304 3lt0_A Enoyl-ACP reductase; tr 46.3 49 0.0017 27.0 6.4 29 113-141 2-30 (329)
305 3pxx_A Carveol dehydrogenase; 46.3 1E+02 0.0034 23.9 9.8 27 112-140 9-35 (287)
306 2wc7_A Alpha amylase, catalyti 46.2 32 0.0011 29.8 5.5 52 123-174 53-123 (488)
307 3lpp_A Sucrase-isomaltase; gly 46.1 52 0.0018 32.3 7.6 52 122-174 329-393 (898)
308 3tzq_B Short-chain type dehydr 46.1 1.1E+02 0.0036 24.1 8.6 64 111-178 9-96 (271)
309 3tpc_A Short chain alcohol deh 46.0 1E+02 0.0034 23.8 8.7 64 112-179 6-93 (257)
310 3p0r_A Azoreductase; structura 46.0 89 0.0031 24.2 7.7 35 111-145 3-45 (211)
311 3cxt_A Dehydrogenase with diff 46.0 92 0.0032 25.0 8.0 28 111-140 32-59 (291)
312 1vl8_A Gluconate 5-dehydrogena 45.9 92 0.0031 24.4 7.8 29 110-140 18-46 (267)
313 3rwb_A TPLDH, pyridoxal 4-dehy 45.9 1E+02 0.0035 23.8 8.9 62 111-178 4-91 (247)
314 3u9l_A 3-oxoacyl-[acyl-carrier 45.8 90 0.0031 25.7 8.0 28 111-140 3-30 (324)
315 2pju_A Propionate catabolism o 45.7 49 0.0017 27.0 6.4 55 113-174 107-161 (225)
316 1dp4_A Atrial natriuretic pept 45.7 57 0.002 26.6 6.7 61 113-175 147-214 (435)
317 3bg3_A Pyruvate carboxylase, m 45.6 79 0.0027 30.4 8.6 98 81-179 160-285 (718)
318 3nq4_A 6,7-dimethyl-8-ribityll 45.5 59 0.002 25.8 6.6 60 113-175 13-80 (156)
319 2lqo_A Putative glutaredoxin R 45.4 30 0.001 24.3 4.4 57 112-172 3-61 (92)
320 1j0h_A Neopullulanase; beta-al 45.2 48 0.0016 29.8 6.7 50 124-173 174-242 (588)
321 1wzl_A Alpha-amylase II; pullu 45.2 46 0.0016 29.9 6.6 50 124-173 171-239 (585)
322 3grp_A 3-oxoacyl-(acyl carrier 45.1 72 0.0025 25.2 7.1 61 112-178 26-112 (266)
323 1usg_A Leucine-specific bindin 45.0 1.1E+02 0.0036 23.8 8.2 61 114-174 4-76 (346)
324 3i1j_A Oxidoreductase, short c 45.0 57 0.002 24.7 6.3 28 111-140 12-39 (247)
325 3r3s_A Oxidoreductase; structu 44.7 1.1E+02 0.0036 24.5 8.1 65 111-179 47-140 (294)
326 3fxa_A SIS domain protein; str 44.7 51 0.0017 24.8 5.9 57 116-172 48-124 (201)
327 2cfc_A 2-(R)-hydroxypropyl-COM 44.7 98 0.0033 23.3 8.4 24 114-139 3-26 (250)
328 2h6r_A Triosephosphate isomera 44.7 84 0.0029 24.9 7.5 45 132-176 75-120 (219)
329 1jub_A Dihydroorotate dehydrog 44.6 77 0.0026 25.8 7.4 51 124-175 142-193 (311)
330 2fwm_X 2,3-dihydro-2,3-dihydro 44.4 1.1E+02 0.0036 23.6 9.4 65 111-179 5-86 (250)
331 3svt_A Short-chain type dehydr 44.4 1.1E+02 0.0039 23.9 8.7 27 112-140 10-36 (281)
332 3rfq_A Pterin-4-alpha-carbinol 44.3 50 0.0017 26.3 6.1 67 111-179 29-101 (185)
333 3dzc_A UDP-N-acetylglucosamine 44.1 15 0.0005 31.1 3.0 39 113-151 26-65 (396)
334 2dh2_A 4F2 cell-surface antige 44.0 40 0.0014 29.1 5.8 52 122-173 32-101 (424)
335 1iy8_A Levodione reductase; ox 44.0 1E+02 0.0034 23.9 7.6 28 111-140 11-38 (267)
336 2g3m_A Maltase, alpha-glucosid 43.9 75 0.0026 29.9 8.0 53 121-174 185-250 (693)
337 2x9g_A PTR1, pteridine reducta 43.9 96 0.0033 24.4 7.6 28 111-140 21-48 (288)
338 3cs3_A Sugar-binding transcrip 43.8 91 0.0031 23.7 7.3 63 112-176 118-186 (277)
339 3edm_A Short chain dehydrogena 43.6 1.1E+02 0.0039 23.7 8.2 63 112-178 7-97 (259)
340 3a28_C L-2.3-butanediol dehydr 43.6 1E+02 0.0034 23.8 7.6 27 152-178 64-92 (258)
341 3o26_A Salutaridine reductase; 43.5 1.1E+02 0.0037 23.6 7.8 27 112-140 11-37 (311)
342 1hdc_A 3-alpha, 20 beta-hydrox 43.5 1E+02 0.0035 23.8 7.7 63 111-179 3-91 (254)
343 1x1t_A D(-)-3-hydroxybutyrate 43.4 1.1E+02 0.0038 23.6 8.0 25 113-139 4-28 (260)
344 1xhl_A Short-chain dehydrogena 43.2 1.1E+02 0.0039 24.4 8.1 41 112-158 25-65 (297)
345 2o23_A HADH2 protein; HSD17B10 43.2 1.1E+02 0.0036 23.3 8.7 65 111-179 10-98 (265)
346 4aef_A Neopullulanase (alpha-a 43.2 45 0.0016 30.3 6.3 50 124-173 237-305 (645)
347 3m1a_A Putative dehydrogenase; 43.1 54 0.0018 25.5 6.0 61 112-178 4-90 (281)
348 3dnf_A ISPH, LYTB, 4-hydroxy-3 43.0 44 0.0015 29.1 5.9 71 74-145 214-288 (297)
349 2b4q_A Rhamnolipids biosynthes 43.0 1.1E+02 0.0036 24.3 7.8 43 111-159 27-69 (276)
350 1pea_A Amidase operon; gene re 43.0 1.3E+02 0.0044 24.2 9.1 64 113-176 8-84 (385)
351 3pwz_A Shikimate dehydrogenase 42.9 1.1E+02 0.0036 25.3 8.0 60 114-179 121-195 (272)
352 2d0o_B DIOL dehydratase-reacti 42.9 54 0.0018 25.3 5.8 61 111-176 6-67 (125)
353 3lcm_A SMU.1420, putative oxid 42.7 61 0.0021 24.8 6.2 58 114-174 2-80 (196)
354 4egf_A L-xylulose reductase; s 42.7 1E+02 0.0035 24.1 7.6 27 112-140 19-45 (266)
355 4dyv_A Short-chain dehydrogena 42.6 78 0.0027 25.2 7.0 61 112-178 27-113 (272)
356 3ksu_A 3-oxoacyl-acyl carrier 42.5 1.2E+02 0.0041 23.7 8.3 28 151-178 73-102 (262)
357 3kvo_A Hydroxysteroid dehydrog 42.5 1.3E+02 0.0045 25.1 8.7 63 112-178 44-140 (346)
358 1wdv_A Hypothetical protein AP 42.4 19 0.00064 26.4 3.0 47 128-174 2-49 (152)
359 3l18_A Intracellular protease 42.3 48 0.0017 24.2 5.3 38 113-152 3-40 (168)
360 1c2y_A Protein (lumazine synth 42.2 40 0.0014 26.7 5.1 60 113-175 14-79 (156)
361 3rih_A Short chain dehydrogena 42.1 1E+02 0.0035 24.9 7.7 44 111-160 39-82 (293)
362 4a26_A Putative C-1-tetrahydro 42.1 90 0.0031 27.0 7.7 53 114-166 40-93 (300)
363 1ydo_A HMG-COA lyase; TIM-barr 42.0 81 0.0028 26.6 7.3 58 115-172 97-175 (307)
364 2hpv_A FMN-dependent NADH-azor 42.0 1.1E+02 0.0037 22.9 8.4 36 113-148 2-43 (208)
365 1mxh_A Pteridine reductase 2; 41.9 84 0.0029 24.4 6.9 27 111-139 9-35 (276)
366 3k31_A Enoyl-(acyl-carrier-pro 41.9 58 0.002 26.1 6.1 67 111-179 28-120 (296)
367 3tsc_A Putative oxidoreductase 41.9 1.2E+02 0.0042 23.6 8.7 28 111-140 9-36 (277)
368 1nff_A Putative oxidoreductase 41.9 1.2E+02 0.0042 23.6 8.4 62 111-178 5-92 (260)
369 2kok_A Arsenate reductase; bru 41.8 24 0.00084 25.3 3.5 40 123-162 13-53 (120)
370 3is3_A 17BETA-hydroxysteroid d 41.6 1.2E+02 0.0042 23.6 8.6 28 111-140 16-43 (270)
371 3ipc_A ABC transporter, substr 41.6 1.3E+02 0.0043 23.6 9.3 39 138-176 40-78 (356)
372 1u6t_A SH3 domain-binding glut 41.5 68 0.0023 24.1 6.1 34 128-163 19-52 (121)
373 3szu_A ISPH, 4-hydroxy-3-methy 41.3 49 0.0017 29.2 6.0 67 73-140 229-299 (328)
374 1oi4_A Hypothetical protein YH 41.0 57 0.002 24.8 5.7 42 110-153 21-62 (193)
375 4iiu_A 3-oxoacyl-[acyl-carrier 41.0 1.2E+02 0.0042 23.4 8.0 66 109-179 22-87 (267)
376 3o38_A Short chain dehydrogena 41.0 1.2E+02 0.0041 23.3 9.5 65 111-179 20-113 (266)
377 1zja_A Trehalulose synthase; s 40.9 63 0.0021 28.8 6.7 51 123-173 29-99 (557)
378 1m53_A Isomaltulose synthase; 40.9 54 0.0018 29.4 6.3 51 123-173 42-112 (570)
379 2a5l_A Trp repressor binding p 40.9 70 0.0024 23.5 6.1 37 113-151 6-44 (200)
380 2pju_A Propionate catabolism o 40.7 52 0.0018 26.9 5.7 62 114-180 14-76 (225)
381 2e6f_A Dihydroorotate dehydrog 40.6 51 0.0017 26.9 5.7 35 139-174 160-195 (314)
382 4fgs_A Probable dehydrogenase 40.2 67 0.0023 26.6 6.4 64 112-178 28-114 (273)
383 2guy_A Alpha-amylase A; (beta- 40.2 65 0.0022 27.7 6.5 51 123-173 40-117 (478)
384 1yde_A Retinal dehydrogenase/r 40.2 1.3E+02 0.0046 23.5 8.7 62 111-178 7-93 (270)
385 3sc4_A Short chain dehydrogena 40.1 1.1E+02 0.0036 24.3 7.4 64 111-178 7-104 (285)
386 1sby_A Alcohol dehydrogenase; 40.1 1.2E+02 0.0042 23.1 7.9 27 112-140 4-30 (254)
387 3ak4_A NADH-dependent quinucli 40.1 1.2E+02 0.0042 23.3 7.6 61 112-178 11-97 (263)
388 3c5y_A Ribose/galactose isomer 40.0 38 0.0013 28.8 4.9 72 113-184 20-107 (231)
389 3lft_A Uncharacterized protein 39.9 1.3E+02 0.0043 23.4 7.7 61 112-176 133-195 (295)
390 3l07_A Bifunctional protein fo 39.7 1E+02 0.0035 26.4 7.7 53 114-166 37-90 (285)
391 3kzv_A Uncharacterized oxidore 39.6 1.3E+02 0.0044 23.2 8.6 61 114-178 3-89 (254)
392 4g85_A Histidine-tRNA ligase, 39.6 1.1E+02 0.0038 27.1 8.1 58 113-174 420-477 (517)
393 3rhb_A ATGRXC5, glutaredoxin-C 39.6 49 0.0017 22.6 4.7 34 115-150 21-54 (113)
394 1ea9_C Cyclomaltodextrinase; h 39.6 58 0.002 29.3 6.3 49 124-172 170-237 (583)
395 1spx_A Short-chain reductase f 39.5 1.1E+02 0.0039 23.6 7.3 28 111-140 4-31 (278)
396 3gkx_A Putative ARSC family re 39.4 35 0.0012 24.9 4.1 41 123-163 12-53 (120)
397 1z3e_A Regulatory protein SPX; 39.4 48 0.0016 24.1 4.9 39 123-161 9-48 (132)
398 4a5o_A Bifunctional protein fo 39.3 1.1E+02 0.0037 26.4 7.7 53 114-166 38-91 (286)
399 2nm0_A Probable 3-oxacyl-(acyl 39.2 1.4E+02 0.0047 23.4 9.0 64 111-178 19-98 (253)
400 2p91_A Enoyl-[acyl-carrier-pro 39.1 82 0.0028 24.8 6.5 65 111-179 19-111 (285)
401 1wma_A Carbonyl reductase [NAD 39.1 1.1E+02 0.0038 23.0 7.0 26 153-178 66-93 (276)
402 3oig_A Enoyl-[acyl-carrier-pro 39.0 1.3E+02 0.0045 23.1 8.2 67 111-179 5-99 (266)
403 1gcy_A Glucan 1,4-alpha-maltot 39.0 81 0.0028 27.9 7.1 50 123-173 33-112 (527)
404 3h6g_A Glutamate receptor, ion 38.9 46 0.0016 26.9 5.1 59 113-175 139-199 (395)
405 1gz6_A Estradiol 17 beta-dehyd 38.8 1.6E+02 0.0053 24.2 8.4 28 111-140 7-34 (319)
406 1hg3_A Triosephosphate isomera 38.6 39 0.0013 27.8 4.7 44 132-175 81-125 (225)
407 2wte_A CSA3; antiviral protein 38.6 1.6E+02 0.0055 24.0 8.7 63 114-178 36-104 (244)
408 2vrn_A Protease I, DR1199; cys 38.4 77 0.0026 23.5 6.0 39 113-153 10-48 (190)
409 3eaf_A ABC transporter, substr 38.3 83 0.0029 25.3 6.6 61 114-175 143-207 (391)
410 2z1n_A Dehydrogenase; reductas 38.3 1.4E+02 0.0046 23.1 8.1 27 112-140 6-32 (260)
411 1w6u_A 2,4-dienoyl-COA reducta 38.3 1.4E+02 0.0048 23.2 8.0 29 110-140 23-51 (302)
412 2bgk_A Rhizome secoisolaricire 38.2 1.3E+02 0.0045 22.9 8.1 63 111-179 14-104 (278)
413 2w61_A GAS2P, glycolipid-ancho 38.1 56 0.0019 30.3 6.1 49 123-174 84-133 (555)
414 3p2o_A Bifunctional protein fo 38.1 1.2E+02 0.004 26.1 7.8 53 114-166 36-89 (285)
415 1uay_A Type II 3-hydroxyacyl-C 38.0 1.2E+02 0.0042 22.5 7.9 61 114-178 3-77 (242)
416 2rk3_A Protein DJ-1; parkinson 37.9 86 0.0029 23.6 6.3 39 111-151 2-40 (197)
417 4g84_A Histidine--tRNA ligase, 37.6 81 0.0028 27.0 6.7 58 113-174 367-424 (464)
418 2ztj_A Homocitrate synthase; ( 37.6 1.2E+02 0.004 26.3 7.8 55 115-170 90-160 (382)
419 4fu0_A D-alanine--D-alanine li 37.6 30 0.001 28.8 3.9 34 112-147 3-41 (357)
420 4hi7_A GI20122; GST, glutathio 37.6 40 0.0014 25.3 4.3 36 126-161 13-48 (228)
421 4ba0_A Alpha-glucosidase, puta 37.6 72 0.0025 30.8 7.0 51 123-174 274-342 (817)
422 3apt_A Methylenetetrahydrofola 37.6 1E+02 0.0035 26.1 7.3 78 86-178 33-110 (310)
423 3i12_A D-alanine-D-alanine lig 37.5 26 0.0009 29.3 3.6 39 112-152 3-46 (364)
424 3k1y_A Oxidoreductase; structu 37.5 1.4E+02 0.0049 23.1 8.1 62 112-175 11-93 (191)
425 3ab8_A Putative uncharacterize 37.5 1.3E+02 0.0044 22.9 7.3 51 125-181 198-248 (268)
426 3r6w_A FMN-dependent NADH-azor 37.4 1.3E+02 0.0046 22.8 8.7 35 113-147 2-43 (212)
427 3gk3_A Acetoacetyl-COA reducta 37.4 1.2E+02 0.0041 23.6 7.2 66 109-179 21-86 (269)
428 1uok_A Oligo-1,6-glucosidase; 37.4 55 0.0019 29.1 5.8 52 123-174 28-99 (558)
429 3v2g_A 3-oxoacyl-[acyl-carrier 37.4 1.5E+02 0.0052 23.4 8.8 65 110-179 28-92 (271)
430 2amj_A Modulator of drug activ 37.3 1.1E+02 0.0037 23.7 6.9 58 112-174 12-77 (204)
431 1fjh_A 3alpha-hydroxysteroid d 37.3 1.2E+02 0.004 23.0 7.0 59 114-179 2-74 (257)
432 3rdw_A Putative arsenate reduc 37.3 34 0.0012 25.0 3.8 41 123-163 13-54 (121)
433 3fni_A Putative diflavin flavo 37.2 1.3E+02 0.0043 22.4 7.3 39 112-152 4-44 (159)
434 3ksu_A 3-oxoacyl-acyl carrier 37.2 1.5E+02 0.005 23.2 7.7 59 112-174 10-69 (262)
435 2xhz_A KDSD, YRBH, arabinose 5 37.1 1.2E+02 0.0041 22.1 6.9 57 116-172 52-128 (183)
436 1tvm_A PTS system, galactitol- 37.0 1.1E+02 0.0039 21.8 7.3 57 113-178 22-80 (113)
437 3fz4_A Putative arsenate reduc 37.0 37 0.0013 24.7 3.9 40 123-162 11-51 (120)
438 2z8u_A Tata-box-binding protei 37.0 27 0.00094 28.2 3.5 87 74-162 17-127 (188)
439 1vim_A Hypothetical protein AF 37.0 98 0.0034 23.5 6.5 60 116-176 50-124 (200)
440 1v95_A Nuclear receptor coacti 36.9 66 0.0023 24.8 5.5 58 114-174 10-67 (130)
441 3saj_A Glutamate receptor 1; r 36.9 49 0.0017 26.9 5.0 62 113-175 129-190 (384)
442 3f1l_A Uncharacterized oxidore 36.9 1E+02 0.0035 23.8 6.6 28 111-140 10-37 (252)
443 2qh8_A Uncharacterized protein 36.8 1.2E+02 0.0043 23.6 7.2 61 112-176 140-202 (302)
444 1o1x_A Ribose-5-phosphate isom 36.7 70 0.0024 25.5 5.7 71 114-184 12-93 (155)
445 3f0i_A Arsenate reductase; str 36.7 29 0.001 25.3 3.3 41 123-163 12-53 (119)
446 4e6p_A Probable sorbitol dehyd 36.6 1.5E+02 0.005 22.9 8.4 64 112-179 7-94 (259)
447 2wyu_A Enoyl-[acyl carrier pro 36.5 94 0.0032 24.1 6.4 65 112-178 7-97 (261)
448 2ew8_A (S)-1-phenylethanol deh 36.5 1.4E+02 0.0049 22.8 9.3 62 111-178 5-93 (249)
449 3etn_A Putative phosphosugar i 36.4 1.2E+02 0.0042 23.5 7.1 58 115-172 61-140 (220)
450 2hq1_A Glucose/ribitol dehydro 36.2 1.3E+02 0.0046 22.4 9.3 12 167-178 83-94 (247)
451 3dii_A Short-chain dehydrogena 36.2 1.5E+02 0.005 22.8 7.8 61 113-179 2-87 (247)
452 3lmz_A Putative sugar isomeras 36.2 67 0.0023 24.7 5.5 46 123-172 86-131 (257)
453 2aaa_A Alpha-amylase; glycosid 36.1 52 0.0018 28.5 5.3 51 123-173 40-117 (484)
454 3c8f_A Pyruvate formate-lyase 36.0 1.2E+02 0.0041 22.5 6.7 43 126-168 147-192 (245)
455 3svl_A Protein YIEF; E. coli C 36.0 91 0.0031 24.0 6.2 60 113-174 5-79 (193)
456 1t0i_A YLR011WP; FMN binding p 36.0 65 0.0022 23.8 5.2 25 114-138 2-30 (191)
457 2o7s_A DHQ-SDH PR, bifunctiona 35.9 95 0.0033 27.7 7.1 59 112-177 363-434 (523)
458 1gee_A Glucose 1-dehydrogenase 35.9 1.4E+02 0.0048 22.6 7.6 28 152-179 68-97 (261)
459 2i0f_A 6,7-dimethyl-8-ribityll 35.8 85 0.0029 24.8 6.1 63 113-175 13-81 (157)
460 3f9i_A 3-oxoacyl-[acyl-carrier 35.8 1.1E+02 0.0036 23.3 6.5 62 112-179 13-96 (249)
461 3hsy_A Glutamate receptor 2; l 35.7 28 0.00095 28.4 3.3 101 69-175 81-187 (376)
462 2d1y_A Hypothetical protein TT 35.6 1.5E+02 0.0051 22.8 9.3 63 111-179 4-89 (256)
463 3ewb_X 2-isopropylmalate synth 35.6 1.1E+02 0.0039 25.5 7.2 62 114-177 96-172 (293)
464 2is8_A Molybdopterin biosynthe 35.4 81 0.0028 23.9 5.7 65 113-179 2-74 (164)
465 3pam_A Transmembrane protein; 35.4 98 0.0034 23.8 6.3 56 114-176 130-185 (259)
466 3qay_A Endolysin; amidase A/B 35.4 94 0.0032 24.1 6.2 49 124-175 31-85 (180)
467 4aee_A Alpha amylase, catalyti 35.2 59 0.002 30.0 5.8 51 123-173 262-331 (696)
468 1fob_A Beta-1,4-galactanase; B 35.0 49 0.0017 27.9 4.8 44 131-174 32-80 (334)
469 1fmc_A 7 alpha-hydroxysteroid 35.0 1.4E+02 0.0049 22.3 7.6 28 152-179 71-100 (255)
470 2ze0_A Alpha-glucosidase; TIM 35.0 76 0.0026 28.2 6.3 50 123-172 28-97 (555)
471 1x92_A APC5045, phosphoheptose 35.0 1.2E+02 0.004 22.6 6.5 32 144-176 117-148 (199)
472 3r8s_F 50S ribosomal protein L 34.9 32 0.0011 27.9 3.5 41 94-142 136-176 (177)
473 1qnr_A Endo-1,4-B-D-mannanase; 34.8 85 0.0029 25.0 6.0 49 124-174 34-110 (344)
474 2qjg_A Putative aldolase MJ040 34.8 1.7E+02 0.0057 23.1 8.6 58 116-173 119-185 (273)
475 3olq_A Universal stress protei 34.6 1E+02 0.0035 24.1 6.4 50 129-181 76-125 (319)
476 3m3m_A Glutathione S-transfera 34.5 49 0.0017 24.3 4.2 25 125-149 12-36 (210)
477 3mah_A Aspartokinase; aspartat 34.5 52 0.0018 24.5 4.5 61 120-180 27-101 (157)
478 3s81_A Putative aspartate race 34.4 1.5E+02 0.0051 24.5 7.6 62 109-173 23-105 (268)
479 3l9c_A 3-dehydroquinate dehydr 34.2 64 0.0022 27.0 5.4 50 122-171 106-176 (259)
480 4iin_A 3-ketoacyl-acyl carrier 34.1 1.6E+02 0.0056 22.8 7.5 29 151-179 89-119 (271)
481 3s55_A Putative short-chain de 34.0 1.7E+02 0.0057 22.8 8.4 64 112-179 9-111 (281)
482 3qek_A NMDA glutamate receptor 34.0 73 0.0025 25.7 5.6 62 113-175 140-223 (384)
483 3l4n_A Monothiol glutaredoxin- 33.9 91 0.0031 22.9 5.7 57 114-172 15-76 (127)
484 3civ_A Endo-beta-1,4-mannanase 33.8 1.2E+02 0.0041 25.9 7.2 50 122-172 50-115 (343)
485 1f76_A Dihydroorotate dehydrog 33.8 1.2E+02 0.0043 24.9 7.1 37 139-176 211-247 (336)
486 2c92_A 6,7-dimethyl-8-ribityll 33.8 73 0.0025 25.3 5.4 58 113-175 18-80 (160)
487 2qhx_A Pteridine reductase 1; 33.7 1.6E+02 0.0055 24.1 7.7 60 111-175 44-104 (328)
488 3aj7_A Oligo-1,6-glucosidase; 33.5 94 0.0032 28.1 6.7 51 123-173 37-107 (589)
489 3g85_A Transcriptional regulat 33.4 22 0.00076 27.2 2.3 63 111-175 10-76 (289)
490 2c0h_A Mannan endo-1,4-beta-ma 33.2 95 0.0032 24.8 6.1 49 125-174 44-111 (353)
491 3nkl_A UDP-D-quinovosamine 4-d 33.2 86 0.0029 21.9 5.2 41 132-173 58-98 (141)
492 3awd_A GOX2181, putative polyo 33.2 1.6E+02 0.0053 22.3 8.2 28 152-179 73-102 (260)
493 3k9c_A Transcriptional regulat 33.1 1.3E+02 0.0043 23.2 6.6 65 112-176 126-194 (289)
494 1nm3_A Protein HI0572; hybrid, 33.1 51 0.0017 25.4 4.3 53 114-171 171-223 (241)
495 3c3k_A Alanine racemase; struc 33.0 1E+02 0.0036 23.5 6.1 63 112-176 124-193 (285)
496 3cis_A Uncharacterized protein 33.0 1.7E+02 0.0059 22.9 7.5 49 128-182 84-137 (309)
497 3n0w_A ABC branched chain amin 32.9 88 0.003 25.0 5.8 64 113-176 7-82 (379)
498 1kz1_A 6,7-dimethyl-8-ribityll 32.8 96 0.0033 24.7 6.0 60 113-175 18-85 (159)
499 3g23_A Peptidase U61, LD-carbo 32.8 2E+02 0.0067 23.9 8.2 68 111-180 2-81 (274)
500 1no5_A Hypothetical protein HI 32.7 1.3E+02 0.0044 21.2 6.8 66 113-183 47-112 (114)
No 1
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=99.96 E-value=2.5e-30 Score=214.05 Aligned_cols=77 Identities=42% Similarity=0.678 Sum_probs=72.8
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 109 STDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
..|+|.|+|||||+|||++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 19 ~~mkp~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvv 95 (181)
T 4b4k_A 19 SHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMV 95 (181)
T ss_dssp ---CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHH
T ss_pred CCCCccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=99.96 E-value=1.5e-29 Score=208.11 Aligned_cols=77 Identities=45% Similarity=0.787 Sum_probs=74.0
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 109 STDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
....|+|+|||||+|||++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 9 ~~~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvv 85 (173)
T 4grd_A 9 THSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGML 85 (173)
T ss_dssp CCSSCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHH
T ss_pred CCCCCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhh
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999985
No 3
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=99.95 E-value=5.1e-29 Score=204.44 Aligned_cols=77 Identities=40% Similarity=0.668 Sum_probs=72.8
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 109 STDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
..|+|+|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 8 ~~~~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 84 (170)
T 1xmp_A 8 HHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMV 84 (170)
T ss_dssp ---CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred ccCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999985
No 4
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=99.95 E-value=1e-28 Score=200.45 Aligned_cols=75 Identities=31% Similarity=0.383 Sum_probs=71.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC-CCeEEEEecCccCcCcCCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~-GikVIIAvAG~AAhLPGVV 185 (185)
|+|+|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++ |++||||+||++|||||||
T Consensus 1 ~~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~Lpgvv 76 (159)
T 3rg8_A 1 MRPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFV 76 (159)
T ss_dssp -CCEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHH
T ss_pred CCCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHH
Confidence 46899999999999999999999999999999999999999999999999999886 7999999999999999985
No 5
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=99.95 E-value=6.9e-29 Score=202.96 Aligned_cols=76 Identities=39% Similarity=0.676 Sum_probs=72.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
.|+|+|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 3 ~m~p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 78 (166)
T 3oow_A 3 AMSVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMV 78 (166)
T ss_dssp --CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHH
T ss_pred CCCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999985
No 6
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=99.95 E-value=9.4e-29 Score=203.48 Aligned_cols=76 Identities=34% Similarity=0.590 Sum_probs=73.7
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
.|+|+|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 10 ~m~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 85 (174)
T 3kuu_A 10 AAGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGML 85 (174)
T ss_dssp CCCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHH
T ss_pred cCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999985
No 7
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=99.95 E-value=1.5e-28 Score=201.38 Aligned_cols=75 Identities=39% Similarity=0.677 Sum_probs=72.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
++|+|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 5 ~~~~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 79 (169)
T 3trh_A 5 NKIFVAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTI 79 (169)
T ss_dssp -CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHH
T ss_pred CCCcEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999985
No 8
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=99.95 E-value=1.3e-28 Score=200.82 Aligned_cols=75 Identities=40% Similarity=0.670 Sum_probs=72.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
..++|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 2 ~~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 76 (163)
T 3ors_A 2 NAMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMV 76 (163)
T ss_dssp -CCCEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999985
No 9
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=99.95 E-value=1.6e-28 Score=202.01 Aligned_cols=76 Identities=46% Similarity=0.809 Sum_probs=72.8
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
.++|+|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 5 ~~~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 80 (174)
T 3lp6_A 5 GERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMV 80 (174)
T ss_dssp -CCCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHH
T ss_pred CCCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999999999999999999985
No 10
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=99.94 E-value=5.5e-28 Score=200.06 Aligned_cols=74 Identities=42% Similarity=0.661 Sum_probs=72.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
+++|+|||||+|||++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 21 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 94 (182)
T 1u11_A 21 APVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMC 94 (182)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999985
No 11
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=99.94 E-value=6.9e-28 Score=199.62 Aligned_cols=74 Identities=54% Similarity=0.878 Sum_probs=71.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
-|.|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 13 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 86 (183)
T 1o4v_A 13 VPRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMV 86 (183)
T ss_dssp -CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999985
No 12
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=99.92 E-value=3.6e-26 Score=185.46 Aligned_cols=69 Identities=32% Similarity=0.561 Sum_probs=66.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPGVV 185 (185)
.|+|||||+||+++|++|.++|++|||+||++|+||||+|+++.+|++++++ +||||+||++|||||||
T Consensus 1 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~---~ViIa~AG~aa~Lpgvv 69 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIAIAGLAAHLPGVV 69 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC---SEEEEEEESSCCHHHHH
T ss_pred CEEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC---CEEEEEcCchhhhHHHH
Confidence 4899999999999999999999999999999999999999999999998765 99999999999999985
No 13
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=99.91 E-value=7.3e-25 Score=198.97 Aligned_cols=75 Identities=23% Similarity=0.379 Sum_probs=72.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCC-eEEEEecCccCcCcCCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIIIVGDGVEAHLSGTL 185 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVIIAvAG~AAhLPGVV 185 (185)
..++|+|||||+||+++|++|..+|++|||+||++|+||||+|+++.+|+++++++|. +||||+|||+|||||||
T Consensus 264 ~~~~V~Ii~gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvv 339 (425)
T 2h31_A 264 SQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVM 339 (425)
T ss_dssp CCCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHH
T ss_pred CCCeEEEEecCcccHHHHHHHHHHHHHcCCceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHH
Confidence 3478999999999999999999999999999999999999999999999999999999 69999999999999985
No 14
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=94.98 E-value=0.03 Score=49.17 Aligned_cols=66 Identities=9% Similarity=0.031 Sum_probs=52.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++..+.....++..+.|++ |+++.+.....+-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 53 ~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~ 118 (387)
T 3uhj_A 53 KRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKT 118 (387)
T ss_dssp SEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHH
T ss_pred CEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHH
Confidence 5799999998877788999999999 99986666778888899999999888888999999999864
No 15
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=94.83 E-value=0.035 Score=47.40 Aligned_cols=67 Identities=15% Similarity=0.026 Sum_probs=54.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++..+.....++..+.|++-|+++.+.+.+-+-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 32 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv 98 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKT 98 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 4799999987766678899999999999886555566666667888888888889999999999863
No 16
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=94.13 E-value=0.075 Score=45.69 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=54.2
Q ss_pred CeEEEEeccCCCHH---HHHHHHHHHHHhCCCeeE-EEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLP---VMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~---vmekA~~vLeefGIpyEv-rVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++...... ..+++.+.|++-|+++.+ .-...|.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 34 ~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 104 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSP 104 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHH
T ss_pred CEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcch
Confidence 47999998877665 899999999999997632 22357888999999999999999999999999763
No 17
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=93.67 E-value=0.15 Score=43.86 Aligned_cols=67 Identities=10% Similarity=0.166 Sum_probs=54.5
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeE-EEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~--vmekA~~vLeefGIpyEv-rVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++..+-.. ..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.+.++|||+-|++.
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 110 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSP 110 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 47999998755433 789999999999997643 22458999999999999998889999999999763
No 18
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=93.51 E-value=0.1 Score=44.22 Aligned_cols=65 Identities=8% Similarity=-0.061 Sum_probs=53.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
++.||++..+.....++..+.|++-|+++.+..--.+-+.+.+.+. +.+.+.++++|||+-|++.
T Consensus 36 ~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 36 RVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKA 100 (354)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHH
T ss_pred eEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHH
Confidence 7999999887767889999999999998866552467788888888 8888888999999999763
No 19
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=93.31 E-value=0.22 Score=44.36 Aligned_cols=66 Identities=12% Similarity=-0.004 Sum_probs=57.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCCC---eEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~Gi---kVIIAvAG~A 178 (185)
.+|.||++....-...+++.+.|++-|+++++.++. ++.+.+.+.+..+.+.+.|+ +++||+-|++
T Consensus 63 ~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGs 134 (390)
T 3okf_A 63 QKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGV 134 (390)
T ss_dssp CEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcH
Confidence 479999999988779999999999999998877665 57888999999998888888 6999999875
No 20
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=92.87 E-value=0.12 Score=44.90 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=54.0
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeE-EEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDL-PVMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl-~vmekA~~vLeefGIpyEv-rVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++..-.. ...++..+.|++-|+++.+ .-...|.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 32 ~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 100 (383)
T 3ox4_A 32 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSP 100 (383)
T ss_dssp CEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHH
Confidence 4799999864222 2578899999999998743 34568999999999999998889999999999864
No 21
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=92.47 E-value=0.11 Score=44.58 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=53.1
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeE-EEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDL-PVMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl-~vmekA~~vLeefGIpyEv-rVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++..... ...++..+.|++-|+++.+ .-...|.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 32 ~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 100 (386)
T 1rrm_A 32 QKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSP 100 (386)
T ss_dssp CEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHH
Confidence 3699999875533 3788999999999987642 22457888899999999998889999999999863
No 22
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=92.21 E-value=0.32 Score=42.33 Aligned_cols=65 Identities=15% Similarity=0.147 Sum_probs=52.1
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~--vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++..+=.. ..+++.+.|++-|+++. +.+ ++-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 113 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWV--EVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV 113 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEE--EECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHHcCCeEE--EecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH
Confidence 47999998544333 68999999999998764 444 4788889999999999999999999999763
No 23
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=92.07 E-value=0.12 Score=46.25 Aligned_cols=65 Identities=11% Similarity=0.056 Sum_probs=53.2
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+|.||++..+.....+++.+.|++-|+++.+.+.+-+-+-+.+.+..+.+.+ +.++|||+-|++.
T Consensus 93 rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSv 157 (450)
T 1ta9_A 93 SAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKT 157 (450)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHH
T ss_pred EEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHH
Confidence 7999998877666789999999999998865666666666678888877777 8999999999863
No 24
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=91.87 E-value=0.28 Score=42.70 Aligned_cols=66 Identities=8% Similarity=0.002 Sum_probs=54.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh------CCCeeEEEEcC---CCCchHHHHHHHHHhhCC--C---eEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDF------GVPYEIKILSP---HQNRKGALSYALSAKERG--I---KIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeef------GIpyEvrVaSA---HRtPe~l~ey~k~ae~~G--i---kVIIAvAG~A 178 (185)
.++.||++........++..+.|++. |+.+...++.. +++.+.+.+..+.+.+.| + +++||+-|++
T Consensus 37 ~k~liVtd~~v~~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGs 116 (393)
T 1sg6_A 37 TTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGV 116 (393)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcH
Confidence 36999998765545788888889887 77776566666 888999999999998889 8 9999999875
No 25
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=91.71 E-value=1.1 Score=35.92 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=49.9
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
+||+..+. ...+.-|.+. ++.+.......|+++..+.++ ....+.+.+.+++.|. ++.+...+..++...++
T Consensus 34 ~tr~rV~~-~~~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~ 110 (339)
T 3h5o_A 34 QLREKVMQ-AVDALAYVPSRSASTLASAKSRTVLVLIPSLANTVFLETLTGIETVLDAAGY--QMLIGNSHYDAGQELQL 110 (339)
T ss_dssp ------------------------------CEEEEEESCSTTCTTHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHH
Confidence 45544433 3334445544 333333344579999887665 5778888999999985 67778889999999999
Q ss_pred HHHHhhCCCeEEEEec
Q 029926 160 ALSAKERGIKIIIVGD 175 (185)
Q Consensus 160 ~k~ae~~GikVIIAvA 175 (185)
++...+++++-+|...
T Consensus 111 ~~~l~~~~vdGiIi~~ 126 (339)
T 3h5o_A 111 LRAYLQHRPDGVLITG 126 (339)
T ss_dssp HHHHHTTCCSEEEEEC
T ss_pred HHHHHcCCCCEEEEeC
Confidence 9888888898777654
No 26
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=91.59 E-value=1.3 Score=35.46 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=50.1
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEecc--CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMES--DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGAL 157 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS--~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ 157 (185)
+||+..+ +...+.-|.+. ++.+.......|+++..+ .++ ....+.+.+.+++.|. ++.+...+..++.-.
T Consensus 33 ~tr~rV~-~~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~ 109 (338)
T 3dbi_A 33 ETKDRVF-QAVEESGYRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEER 109 (338)
T ss_dssp ----------------------------CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTC--EEEEEECTTSHHHHH
T ss_pred HHHHHHH-HHHHHHCCCcCHHHHHhhhCCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHH
Confidence 5555443 33444555554 333333345679999987 444 3567788888999985 677778888999888
Q ss_pred HHHHHHhhCCCeEEEEecC
Q 029926 158 SYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 158 ey~k~ae~~GikVIIAvAG 176 (185)
++++...+++++-+|....
T Consensus 110 ~~~~~l~~~~vdgiIi~~~ 128 (338)
T 3dbi_A 110 QAIQYLLDLRCDAIMIYPR 128 (338)
T ss_dssp HHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHhCCCCEEEEeCC
Confidence 8888888888988887653
No 27
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=89.74 E-value=1.6 Score=35.26 Aligned_cols=88 Identities=13% Similarity=0.071 Sum_probs=48.3
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
+||+..+. ...+.-|.+. ++.+.......|+++..+.+| ....+.+.+.+++.|. ++.+...+. ++...++
T Consensus 36 ~tr~rV~~-~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~ 111 (333)
T 3jvd_A 36 QTREKVQA-AAKELNYVPNQLAKALREHRSALVGVIVPDLSNEYYSESLQTIQQDLKAAGY--QMLVAEANS-VQAQDVV 111 (333)
T ss_dssp -----------------------------CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECCS-HHHHHHH
T ss_pred HHHHHHHH-HHHHHCCCcCHHHHHhhcCCCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEECCCC-hHHHHHH
Confidence 45544333 3334445444 333333344579999988777 3567778888899985 667777777 8888888
Q ss_pred HHHHhhCCCeEEEEecC
Q 029926 160 ALSAKERGIKIIIVGDG 176 (185)
Q Consensus 160 ~k~ae~~GikVIIAvAG 176 (185)
++...+++++-+|....
T Consensus 112 ~~~l~~~~vdGiIi~~~ 128 (333)
T 3jvd_A 112 MESLISIQAAGIIHVPV 128 (333)
T ss_dssp HHHHHHHTCSEEEECCC
T ss_pred HHHHHhCCCCEEEEcch
Confidence 88887778887776543
No 28
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=89.70 E-value=2.2 Score=34.55 Aligned_cols=88 Identities=10% Similarity=0.120 Sum_probs=48.7
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
+||+..+. ...+.-|.+. ++.+.......|++++.+.++- ...+.+.+.+++.|. ++.+...+..++...++
T Consensus 42 ~tr~rV~~-~a~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~ 118 (355)
T 3e3m_A 42 ETRERILK-VVKDMNYVPDQVAGSLTTKRSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGL--QLLLGYTAYSPEREEQL 118 (355)
T ss_dssp ------------------------------CEEEEEESCSBCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHH
Confidence 45544333 3334445544 3333333345799999887764 456777788888885 66777888899999999
Q ss_pred HHHHhhCCCeEEEEec
Q 029926 160 ALSAKERGIKIIIVGD 175 (185)
Q Consensus 160 ~k~ae~~GikVIIAvA 175 (185)
++...+++++-+|...
T Consensus 119 ~~~l~~~~vdGiI~~~ 134 (355)
T 3e3m_A 119 VETMLRRRPEAMVLSY 134 (355)
T ss_dssp HHHHHHTCCSEEEEEC
T ss_pred HHHHHhCCCCEEEEeC
Confidence 9888888898777654
No 29
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=89.53 E-value=0.38 Score=41.80 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=48.7
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~--vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||+|..+-.. ..++..+.|+ |+++ .+.+ ++.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~--g~~~--~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK--GMDV--LEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSV 118 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT--TSEE--EEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC--CCEE--EEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchH
Confidence 47999998765443 6778777776 7754 4444 5778889999999888889999999999863
No 30
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=88.97 E-value=3.4 Score=31.76 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=50.0
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
+.+|++++-+.+|- ...+.+.+.+++.|+ ++.+...+..++...++++.+.+++++.||....
T Consensus 5 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 70 (291)
T 3l49_A 5 GKTIGITAIGTDHDWDLKAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLG 70 (291)
T ss_dssp TCEEEEEESCCSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESS
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 35799999877663 457788888999985 6777788889998888998888888988886643
No 31
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=88.93 E-value=1.5 Score=37.68 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=52.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCC---CeEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERG---IKIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~G---ikVIIAvAG~A 178 (185)
.+|.||++........++..+.|++- ++++..+.. +|.+.+.+.+..+.+.+.| .+++||+-|++
T Consensus 35 ~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGs 105 (368)
T 2gru_A 35 DQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGL 105 (368)
T ss_dssp SEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChH
Confidence 47999999988877889999999876 777666654 6778888888888877777 69999998875
No 32
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=88.72 E-value=2.6 Score=33.19 Aligned_cols=62 Identities=10% Similarity=0.151 Sum_probs=50.3
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCC---CeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGV---PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGI---pyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
..|+|+. +.++ -++++.+.+.|++.|. ...+.+..++..+++..++++...+++++.||+..
T Consensus 3 ~~Igvi~-~~~~p~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~ 70 (295)
T 3lft_A 3 AKIGVLQ-FVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIA 70 (295)
T ss_dssp EEEEEEE-CSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEES
T ss_pred eEEEEEE-ccCChhHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4688883 3333 3567788889999998 77788889999999999999999888999999864
No 33
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=88.70 E-value=2.7 Score=33.59 Aligned_cols=87 Identities=8% Similarity=0.125 Sum_probs=46.2
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
+||+..+. ...+.-|.+. ++.+.......|++++...++- ...+.+.+.+++.|. ++.+...+-.++...++
T Consensus 32 ~tr~rV~~-~~~~lgY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~ 108 (330)
T 3ctp_A 32 DAREKIQK-VVDELNYTPNALARAMFTKNSKTIGLMVPNISNPFFNQMASVIEEYAKNKGY--TLFLCNTDDDKEKEKTY 108 (330)
T ss_dssp -----------------------------CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCcCHHHHHhhcCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHH
Confidence 45544333 2333345443 3333333345799999765552 456677788888885 56666777788888888
Q ss_pred HHHHhhCCCeEEEEec
Q 029926 160 ALSAKERGIKIIIVGD 175 (185)
Q Consensus 160 ~k~ae~~GikVIIAvA 175 (185)
++....++++-+| ..
T Consensus 109 ~~~l~~~~vdgiI-~~ 123 (330)
T 3ctp_A 109 LEVLQSHRVAGII-AS 123 (330)
T ss_dssp HHHHHHTTCSEEE-EE
T ss_pred HHHHHhCCCCEEE-EC
Confidence 8888788898888 54
No 34
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=88.68 E-value=0.48 Score=40.87 Aligned_cols=65 Identities=8% Similarity=0.007 Sum_probs=48.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++... ....++..+.|++.++.+ +.-...|.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 35 ~r~liVtd~~~-~~~~~~v~~~L~~~~~~v-~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~ 99 (353)
T 3hl0_A 35 SRALVLSTPQQ-KGDAEALASRLGRLAAGV-FSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGGGST 99 (353)
T ss_dssp CCEEEECCGGG-HHHHHHHHHHHGGGEEEE-ECCCCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CEEEEEecCch-hhHHHHHHHHHhhCCcEE-ecCcCCCCcHHHHHHHHHHHhccCCCEEEEeCCcHH
Confidence 36999998764 567888888898754321 111235667788889998888999999999999864
No 35
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=88.65 E-value=3.4 Score=33.04 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=47.4
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
+||+..+.. -.+.-|.+. ++.+.......|++++...++- ...+.+.+.+++.|. ++.+...+-.++...++
T Consensus 35 ~tr~rV~~~-a~~lgY~pn~~ar~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~ 111 (332)
T 2o20_A 35 KTRQKVLEA-IAELDYRPNAVARGLASKRTTTVGVILPTITSTYFAAITRGVDDIASMYKY--NMILANSDNDVEKEEKV 111 (332)
T ss_dssp ----------------------------CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHH
T ss_pred HHHHHHHHH-HHHHCCCcCHHHHHHhcCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEECCCChHHHHHH
Confidence 555544332 223334443 3333333445799999765552 456677778888885 56667777888888888
Q ss_pred HHHHhhCCCeEEEEecC
Q 029926 160 ALSAKERGIKIIIVGDG 176 (185)
Q Consensus 160 ~k~ae~~GikVIIAvAG 176 (185)
++....++++-+|....
T Consensus 112 ~~~l~~~~vdgiI~~~~ 128 (332)
T 2o20_A 112 LETFLSKQVDGIVYMGS 128 (332)
T ss_dssp HHHHHHTTCSEEEECSS
T ss_pred HHHHHhCCCCEEEEeCC
Confidence 88887888988877653
No 36
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=88.44 E-value=2.2 Score=36.76 Aligned_cols=64 Identities=17% Similarity=0.125 Sum_probs=48.3
Q ss_pred CCeEEEEec-cCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIME-SDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMG-S~SD----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
+.+|++|.- +.+| ..+.+.+.+..+++|-.+++.++.....+++.+++++.+.++|+++||+..
T Consensus 26 ~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g 94 (356)
T 3s99_A 26 KLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTS 94 (356)
T ss_dssp CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECS
T ss_pred CCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 347888884 4567 445666777778899677888777766666778888888889999988864
No 37
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=88.29 E-value=3.8 Score=31.70 Aligned_cols=63 Identities=13% Similarity=0.148 Sum_probs=51.1
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...|++++.+.++ ....+.+.+.+++.|+ ++.+...+..++...++++...+++++-+|....
T Consensus 8 ~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (291)
T 3egc_A 8 SNVVGLIVSDIENVFFAEVASGVESEARHKGY--SVLLANTAEDIVREREAVGQFFERRVDGLILAPS 73 (291)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CcEEEEEECCCcchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4579999988777 4567778888899985 6778888999999999999888888988886554
No 38
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=88.16 E-value=4.6 Score=31.08 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=45.8
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 111 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 111 ~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
|+.+|+++....+| ....+.+.+.+++.|+ ++.+....-.++...++++....++++.+|....
T Consensus 1 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 67 (290)
T 2fn9_A 1 MKGKMAIVISTLNNPWFVVLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPT 67 (290)
T ss_dssp --CEEEEEESCSSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CceEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 45679999876555 2456677778888885 5566677778888888888777788888877654
No 39
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=87.59 E-value=4.7 Score=31.30 Aligned_cols=66 Identities=15% Similarity=0.232 Sum_probs=48.7
Q ss_pred CCCCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 109 STDTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
......|+++.-..+| ....+.+.+.+++.|+ ++.+...+..++...++++....++++-+|....
T Consensus 17 ~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 85 (293)
T 2iks_A 17 AGRTRSIGLVIPDLENTSYTRIANYLERQARQRGY--QLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTS 85 (293)
T ss_dssp -CCCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred cCCCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3344579999876665 3556777788889885 5667777778888888888887888988877654
No 40
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=87.46 E-value=5.6 Score=30.81 Aligned_cols=63 Identities=13% Similarity=0.248 Sum_probs=50.3
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCee-EEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyE-vrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+..|++++.+.++ ....+.+.+.+++.|+ + +.+...+..++.-.++++...+++++-+|...
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 75 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGY--TALISFSTNSDVKKYQNAIINFENNNVDGIITSA 75 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCC--CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc
Confidence 44579999988776 3456777888889985 6 67788899999999999888888898887765
No 41
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=86.96 E-value=2.5 Score=34.35 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=44.7
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
+||+..+. ...+.-|.+. ++.+.......|+++....+|- ...+.+.+.+++.|. ++.+...+..++...++
T Consensus 38 ~tr~rV~~-aa~~lgY~pn~~ar~l~~~~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~ 114 (348)
T 3bil_A 38 STRERIQQ-LASDLGYRANAQARALRSSRSNTIGVIVPSLINHYFAAMVTEIQSTASKAGL--ATIITNSNEDATTMSGS 114 (348)
T ss_dssp -------------------------------CEEEEESCSSSHHHHHHHHHHHHHHHHTTC--CEEEEECTTCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCcCHHHHhhhcCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHH
Confidence 45544333 2233335443 3333333345699999766552 456777888888886 45566677788888888
Q ss_pred HHHHhhCCCeEEEEec
Q 029926 160 ALSAKERGIKIIIVGD 175 (185)
Q Consensus 160 ~k~ae~~GikVIIAvA 175 (185)
++....++++-+|...
T Consensus 115 ~~~l~~~~vdgiI~~~ 130 (348)
T 3bil_A 115 LEFLTSHGVDGIICVP 130 (348)
T ss_dssp HHHHHHTTCSCEEECC
T ss_pred HHHHHhCCCCEEEEeC
Confidence 8888778888777654
No 42
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=86.72 E-value=0.69 Score=40.03 Aligned_cols=65 Identities=12% Similarity=0.041 Sum_probs=48.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++... ....+++.+.|++.++.+ +.-..+|.+.+.+.+.++.+++.++++|||+-|++.
T Consensus 37 ~r~liVtd~~~-~~~~~~v~~~L~~~~~~~-f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 101 (358)
T 3jzd_A 37 KRALVLCTPNQ-QAEAERIADLLGPLSAGV-YAGAVMHVPIESARDATARAREAGADCAVAVGGGST 101 (358)
T ss_dssp SCEEEECCGGG-HHHHHHHHHHHGGGEEEE-ECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CeEEEEeCCcH-HHHHHHHHHHhccCCEEE-ecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCcHH
Confidence 36999998865 567888888888754211 111235667788888888888888999999999864
No 43
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=86.66 E-value=0.99 Score=39.72 Aligned_cols=65 Identities=9% Similarity=-0.012 Sum_probs=52.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCC---CeEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERG---IKIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~G---ikVIIAvAG~A 178 (185)
.+|.||++..... ..++..+.|++-|+++++.+.. ++.+.+.+.+..+.+.+.| .+++||+-|++
T Consensus 44 ~rvlIVtd~~v~~-~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGA 114 (368)
T ss_dssp SEEEEEECGGGHH-HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHH
T ss_pred CEEEEEECccHHH-HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChH
Confidence 4799999998754 5889999999999988777664 5677788888887776654 59999999985
No 44
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=86.56 E-value=3.4 Score=32.46 Aligned_cols=63 Identities=8% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...|++++.+.+| ....+.+.+.+++.|. ++.+...+..++...++++...+++++-+|....
T Consensus 15 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 80 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHST--DVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRR 80 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCC
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecC
Confidence 3569999988776 5667888889999986 5667788888998899999888888988877654
No 45
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=86.50 E-value=4.1 Score=31.78 Aligned_cols=63 Identities=13% Similarity=0.083 Sum_probs=50.7
Q ss_pred CCCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
....|++++.+.++ ....+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~ 78 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGK--TILIANTGGSSEREVEIWKMFQSHRIDGVLYVT 78 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 34579999987765 2788899999999985 667778888999888999888888887777654
No 46
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=86.49 E-value=4.7 Score=32.37 Aligned_cols=69 Identities=13% Similarity=0.057 Sum_probs=52.2
Q ss_pred CCCCCCCCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 105 ANGDSTDTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 105 ~~~~~~~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
+.+.......|++++.+.+| ..+.+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 61 ~~l~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~ 132 (344)
T 3kjx_A 61 GALASNRVNLVAVIIPSLSNMVFPEVLTGINQVLEDTEL--QPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAG 132 (344)
T ss_dssp SCSTTSCCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSS--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred HHhhcCCCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEEC
Confidence 33333344579999987766 4567788888888875 566778888999999999888888888777654
No 47
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=86.36 E-value=0.68 Score=39.42 Aligned_cols=65 Identities=9% Similarity=0.008 Sum_probs=46.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCCC---eEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~Gi---kVIIAvAG~AA 179 (185)
.+|.||++........++..+.| +-| ++++.+.. ++.+.+.+.+..+.+.+.|+ +++||+-|++.
T Consensus 32 ~~~liVtd~~~~~~~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv 102 (354)
T 1xah_A 32 DQSFLLIDEYVNQYFANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGAT 102 (354)
T ss_dssp SCEEEEEEHHHHHHHHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChHH
Confidence 36899987755444677777778 777 66666664 57889999999999988888 99999999753
No 48
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=85.96 E-value=8.3 Score=29.60 Aligned_cols=65 Identities=14% Similarity=0.111 Sum_probs=49.8
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 111 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 111 ~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
....|++++.+.+| ....+.+.+.+++.|+ ++.+...+..++...++++.+.+++++.||.....
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~ 74 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKY--EALVATSQNSRISEREQILEFVHLKVDAIFITTLD 74 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 34579999988777 3456777788889986 66677888899988899988888889888876543
No 49
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=85.30 E-value=6 Score=30.46 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=50.5
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCC--CchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQ--NRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHR--tPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
..+|++++-+.+| ..+.+.+.+.++++|+ ++.+...+. .++...++++.+.+++++.||.......
T Consensus 5 ~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~ 75 (304)
T 3o1i_D 5 DEKICAIYPHLKDSYWLSVNYGMVSEAEKQGV--NLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPH 75 (304)
T ss_dssp CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTC--EEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTT
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--eEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh
Confidence 3579999988776 3456677788889985 677778887 8888888898888888988887754433
No 50
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=85.10 E-value=2.2 Score=27.48 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=36.5
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh
Q 029926 115 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE 165 (185)
Q Consensus 115 VaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~ 165 (185)
|.|..- +.=+.++++...|++.|++|++.-+..+..+....++.+....
T Consensus 6 v~ly~~--~~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~ 54 (89)
T 3msz_A 6 VKIYTR--NGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGK 54 (89)
T ss_dssp EEEEEC--TTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTC
T ss_pred EEEEEc--CCChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCC
Confidence 555433 3459999999999999999998887777766676777654433
No 51
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=85.03 E-value=7.9 Score=29.55 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=46.5
Q ss_pred CCCeEEEEecc--CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 111 DTPIVGIIMES--DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 111 ~~~kVaIIMGS--~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...+|++++.. .+| ....+.+.+.+++.|+ ++.+......++...++++....++++.+|....
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 86 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 86 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTC--EEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecC
Confidence 34579999876 343 3456777788888886 5667777788888888888877788988877654
No 52
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=84.39 E-value=4.5 Score=33.36 Aligned_cols=26 Identities=15% Similarity=0.064 Sum_probs=14.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
+.||++|+|+.+ -+.+.+++.|-+-|
T Consensus 6 ~gKvalVTGas~--GIG~aiA~~la~~G 31 (254)
T 4fn4_A 6 KNKVVIVTGAGS--GIGRAIAKKFALND 31 (254)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHcC
Confidence 456788887766 23344444444444
No 53
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=84.35 E-value=8.8 Score=28.99 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=46.6
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
..|++++.+.+| ..+.+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 66 (255)
T 1byk_A 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQGY--DPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFG 66 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CEEEEEeCCCCCccHHHHHHHHHHHHHHcCC--EEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 469999877666 3556777888889985 566677778888888888888788888777654
No 54
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=84.03 E-value=5.2 Score=32.40 Aligned_cols=87 Identities=7% Similarity=0.100 Sum_probs=42.5
Q ss_pred hhhhhhhhhcCCCceeeec--cCCCCCCCCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCC-chHHHH
Q 029926 85 STRKDYSSVREPSTVFEEE--NANGDSTDTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQN-RKGALS 158 (185)
Q Consensus 85 ~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRt-Pe~l~e 158 (185)
+||+..+. ...+.-|.+. ++.+.......|++++.+.++ ..+.+.+.+.+++.|+ ++.+...+.. ++...+
T Consensus 33 ~tr~rV~~-~a~~lgY~pn~~ar~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~ 109 (349)
T 1jye_A 33 KTREKVEA-AMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAILSRADQLGA--SVVVSMVERSGVEACKT 109 (349)
T ss_dssp ------------------------------CEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECCSSSHHHHHH
T ss_pred HHHHHHHH-HHHHHCCCcCHHHHHhhcCCCCEEEEEeCCCCcccHHHHHHHHHHHHHHcCC--EEEEEeCCCCcHHHHHH
Confidence 45554333 3334445544 333333334579999977555 2456777888889886 5555665554 666677
Q ss_pred HHHHHhhCCCeEEEEe
Q 029926 159 YALSAKERGIKIIIVG 174 (185)
Q Consensus 159 y~k~ae~~GikVIIAv 174 (185)
+++...+++++-+|..
T Consensus 110 ~l~~l~~~~vdGiIi~ 125 (349)
T 1jye_A 110 AVHNLLAQRVSGLIIN 125 (349)
T ss_dssp HHHHHHTTTCSCEEEE
T ss_pred HHHHHHHCCCCEEEEe
Confidence 7877777778777765
No 55
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=83.92 E-value=10 Score=29.60 Aligned_cols=63 Identities=11% Similarity=0.155 Sum_probs=48.9
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
.+|++++-+.++ ....+.+.+.++++|+ ++.+......++...++++.+.+++++.||.....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 68 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN 68 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 468888876443 5567788888999985 66677788888888888888888889888876644
No 56
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=83.39 E-value=6.4 Score=31.62 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=43.2
Q ss_pred CeEEEEec-cCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIME-SDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMG-S~SD----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|++|.- ..+| ..+.+.+.+.++++|+ ++.+...+..+++.+++++.+.+++++.||...
T Consensus 6 ~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~ 71 (296)
T 2hqb_A 6 GMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDV--DVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHG 71 (296)
T ss_dssp CEEEEECCCC----CCTHHHHHHHHHHHHHSCC--EEEEECCCCSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred cEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCC--eEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 46888884 3555 3456777788899985 566666666667777788888888999998864
No 57
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=83.37 E-value=4.3 Score=29.56 Aligned_cols=53 Identities=15% Similarity=0.052 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029926 127 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 181 (185)
Q Consensus 127 vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhL 181 (185)
..+++.+.+++.|+++++.+.-.+-.| .+.+++.+++.+++.||.++-....+
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~v~~G~~--~~~I~~~a~~~~~DLIV~G~~g~~~~ 131 (155)
T 3dlo_A 79 TLSWAVSIIRKEGAEGEEHLLVRGKEP--PDDIVDFADEVDAIAIVIGIRKRSPT 131 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSSCH--HHHHHHHHHHTTCSEEEEECCEECTT
T ss_pred HHHHHHHHHHhcCCCceEEEEecCCCH--HHHHHHHHHHcCCCEEEECCCCCCCC
Confidence 345566677778999988765555455 35667777788899999887654444
No 58
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=83.20 E-value=10 Score=29.07 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=46.2
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...|++++.+.++ ....+.+.+.+++.|. ++.+......++...++++...+++++.+|....
T Consensus 7 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 72 (289)
T 1dbq_A 7 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCS 72 (289)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEec
Confidence 3479999876555 2356677778888885 5666777788888888888887888887776554
No 59
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=82.81 E-value=11 Score=29.01 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=48.6
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
+..|++++.+.+| ....+.+.+.+++.|+ ++.+...+..++...++++...+++++-+|....
T Consensus 7 s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 72 (276)
T 3jy6_A 7 SKLIAVIVANIDDYFSTELFKGISSILESRGY--IGVLFDANADIEREKTLLRAIGSRGFDGLILQSF 72 (276)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHTTTC--EEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESS
T ss_pred CcEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 3579999988766 3456677778888874 6777888888988888888888888888777653
No 60
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=82.64 E-value=5 Score=28.76 Aligned_cols=57 Identities=4% Similarity=0.006 Sum_probs=38.4
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 114 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 114 kVaIIMGS~---SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
.|.|.|-+. +.=|.+++|.+.|++.||+|+..=+.. .|+...++.+......+ .|||
T Consensus 17 ~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~--d~~~~~~l~~~~g~~tvP~ifi 77 (111)
T 3zyw_A 17 PCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS--DEEVRQGLKAYSSWPTYPQLYV 77 (111)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC--CHHHHHHHHHHHCCCCCCEEEE
Confidence 477777533 667999999999999999997765554 36555555543333333 5555
No 61
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=82.46 E-value=8.7 Score=29.72 Aligned_cols=63 Identities=13% Similarity=0.134 Sum_probs=46.9
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...|++++...+| ....+.+.+.+++.|. ++.+......++...++++...+++++-+|....
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 73 (285)
T 3c3k_A 8 TGMLLVMVSNIANPFCAAVVKGIEKTAEKNGY--RILLCNTESDLARSRSCLTLLSGKMVDGVITMDA 73 (285)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCC
T ss_pred CCEEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3579999976655 3456777788888885 5666677778888888888887888988887654
No 62
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=82.21 E-value=13 Score=28.08 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=49.5
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
..|++++.+.+| ....+.+.+.+++.|. ++.+...+..++...++++...+++++-+|.....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 68 (272)
T 3o74_A 3 RTLGFILPDLENPSYARIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCL 68 (272)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred eEEEEEeCCCcChhHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 469999988776 3456777788888886 56677888899998999988888889888876543
No 63
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=81.87 E-value=1.2 Score=38.15 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=46.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCCC---eEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~Gi---kVIIAvAG~A 178 (185)
.+|.||++..... ..++..+.|+ +++ + .+.. +|.+.+.+.+..+.+.+.++ +++||+-|++
T Consensus 29 ~kvliVtd~~v~~-~~~~v~~~L~-~~~--~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGs 95 (348)
T 1ujn_A 29 GPAALLFDRRVEG-FAQEVAKALG-VRH--L-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGT 95 (348)
T ss_dssp SCEEEEEEGGGHH-HHHHHHHHHT-CCC--E-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHH-HHHHHHHHhc-cCe--E-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcH
Confidence 4699999987666 8888888887 554 4 4443 67788899998887777665 8999998875
No 64
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=81.58 E-value=5.6 Score=28.10 Aligned_cols=58 Identities=16% Similarity=0.123 Sum_probs=38.6
Q ss_pred CeEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 113 PIVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 113 ~kVaIIMGS~---SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
.+|.|.+-++ ..=+.+++|.+.|++.||+|+..=+.- .|+...++.+......+ .|||
T Consensus 18 ~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~--~~~~~~~l~~~~g~~tvP~ifi 79 (109)
T 3ipz_A 18 EKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILE--NEMLRQGLKEYSNWPTFPQLYI 79 (109)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHHHHHHTCSSSCEEEE
T ss_pred CCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCC--CHHHHHHHHHHHCCCCCCeEEE
Confidence 3577877663 367899999999999999997665543 45555555543333333 5555
No 65
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=81.50 E-value=11 Score=29.92 Aligned_cols=64 Identities=14% Similarity=0.078 Sum_probs=46.0
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEE-cCCCCchHHHHHHHHHhhCCCeEEEEecCcc
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKIL-SPHQNRKGALSYALSAKERGIKIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVa-SAHRtPe~l~ey~k~ae~~GikVIIAvAG~A 178 (185)
.+|++++-..++- ...+.+.+.++++| |++.+. .+.-.++.-.+.++.+-.++++.||...--.
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~ 71 (316)
T 1tjy_A 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALG--IDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSP 71 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHT--CEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSS
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHhC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 4799998765552 33455666778888 466665 4778888888888888888899888765433
No 66
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=81.43 E-value=5.5 Score=31.22 Aligned_cols=65 Identities=12% Similarity=0.129 Sum_probs=48.7
Q ss_pred CCCCCeEEEEecc-----CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 109 STDTPIVGIIMES-----DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 109 ~~~~~kVaIIMGS-----~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
......|++++.+ .+| ..+.+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 19 ~~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 91 (305)
T 3huu_A 19 TNKTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGY--STRMTVSENSGDLYHEVKTMIQSKSVDGFILLY 91 (305)
T ss_dssp --CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTC--EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred hCCCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 3344579999987 455 3557778888899985 666777888888888888888888898887654
No 67
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=81.43 E-value=12 Score=29.92 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=47.7
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh--CCCeEEEEec
Q 029926 112 TPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE--RGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~--~GikVIIAvA 175 (185)
.++|++|+-+.++ ..+.+.+.+.++++|+ ++.+..+...++...+.++.+-. ++++.||...
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~ 70 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGL--DLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN 70 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCC--eEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 4579999998877 3566777888889986 55566788889888888877766 5888888764
No 68
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=81.05 E-value=3.7 Score=31.40 Aligned_cols=59 Identities=14% Similarity=-0.051 Sum_probs=35.4
Q ss_pred CCeEEEEeccCC----CHHHHHHHHHH-HHHhCCCeeEEEEcCCCC-----------chHHHHHHHHHhhCCCeEEEEe
Q 029926 112 TPIVGIIMESDS----DLPVMNDAART-LSDFGVPYEIKILSPHQN-----------RKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 112 ~~kVaIIMGS~S----Dl~vmekA~~v-LeefGIpyEvrVaSAHRt-----------Pe~l~ey~k~ae~~GikVIIAv 174 (185)
+.+|.||.||.. =...++.+.+. |++-|+ ++.++..... |+.+.++.+...+ ++.+|-+
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~--~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~--aD~ii~~ 76 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDS--QGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCN--ADGLIVA 76 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSE--EEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHH--CSEEEEE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCC--eEEEEEccccCchhhcccccCcHHHHHHHHHHHH--CCEEEEE
Confidence 347999999953 34556666676 776675 4555554443 3566666665555 4444433
No 69
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=81.03 E-value=2.1 Score=34.39 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=47.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCee---EEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYE---IKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyE---vrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
|+.+|+|+.+.-.+-...+.|.+.|++.|++.+ ++|=+|-=.|-...++++ ...++.+||..
T Consensus 1 m~~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~---~~~yDavIaLG 65 (156)
T 2b99_A 1 MTKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLE---EEGCDIVMALG 65 (156)
T ss_dssp -CCEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHH---HSCCSEEEEEE
T ss_pred CCcEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 456799999998876667999999999999876 456677777776666654 45688888753
No 70
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=80.80 E-value=4.4 Score=26.90 Aligned_cols=43 Identities=14% Similarity=0.126 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC---CCchHHHHHHHHHhhC
Q 029926 124 DLPVMNDAARTLSDFGVPYEIKILSPH---QNRKGALSYALSAKER 166 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpyEvrVaSAH---RtPe~l~ey~k~ae~~ 166 (185)
-=+.+.+|...|++.||+|+..=+..+ ..|+...++.+.....
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 457899999999999999987666533 4566666666544443
No 71
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=80.77 E-value=15 Score=28.18 Aligned_cols=61 Identities=16% Similarity=0.393 Sum_probs=44.4
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
+.|++++.+.++- .+.+.+.+.+++.| |++.+...+..++.-.++++...+++++-+|...
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 65 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLG--YNLVVLDSQNNPAKELANVQDLTVRGTKILLINP 65 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcC--cEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4688888766553 45667777888888 5666677777777777788777777788777654
No 72
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=80.74 E-value=3.7 Score=35.04 Aligned_cols=64 Identities=9% Similarity=-0.007 Sum_probs=50.6
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc-hHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 115 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 115 VaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP-e~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+..|.-+.||.+.++++.+.+++.|+.+...+..+++++ +++.++++.+.+-|+.. |..++..+
T Consensus 109 ~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~-i~l~DT~G 173 (345)
T 1nvm_A 109 VVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC-IYMADSGG 173 (345)
T ss_dssp EEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE-EEEECTTC
T ss_pred EEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE-EEECCCcC
Confidence 344456889999999999999999999999988888885 78899999888878763 55555443
No 73
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=80.69 E-value=10 Score=29.17 Aligned_cols=63 Identities=8% Similarity=0.044 Sum_probs=45.4
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
..|++++-+.+|- ...+.+.+.+++.|. +++.+...+..++...++++.+..++++.||....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~ 68 (309)
T 2fvy_A 3 TRIGVTIYKYDDNFMSVVRKAIEQDAKAAPD-VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLV 68 (309)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHTCTT-EEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEEeccCCcHHHHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3688888765552 456667777888885 36777777778888888888877788887777543
No 74
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=80.50 E-value=8.4 Score=25.60 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=48.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC---------eeEEEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVP---------YEIKILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIp---------yEvrVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
..-.|-.|+-+|.+-++....-|...|++ |.++| ++..+.++..+..+..+..|++.+|.
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~v-Gpf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQI-GAFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE-EEESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEE-CCcCCHHHHHHHHHHHHHcCCceEEE
Confidence 35789999999999999999999999987 34444 46678888888888888778877764
No 75
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=80.24 E-value=5.6 Score=30.07 Aligned_cols=61 Identities=16% Similarity=0.223 Sum_probs=43.5
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEc--CCCCchHHHHHHHHHhhCC-CeEEEEec
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILS--PHQNRKGALSYALSAKERG-IKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaS--AHRtPe~l~ey~k~ae~~G-ikVIIAvA 175 (185)
++|+++..+.++ ....+.+.+.+++.|+. +.+.. .+..++...++++.+.+++ ++-+|...
T Consensus 1 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~ 67 (276)
T 3ksm_A 1 PKLLLVLKGDSNAYWRQVYLGAQKAADEAGVT--LLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAP 67 (276)
T ss_dssp CEEEEECSCSSSTHHHHHHHHHHHHHHHHTCE--EEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHHHcCCE--EEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 368888876665 34567777888888864 44554 5678888888887777777 88777765
No 76
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=80.20 E-value=6.7 Score=31.06 Aligned_cols=63 Identities=13% Similarity=-0.004 Sum_probs=48.5
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCC----CeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGV----PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGI----pyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
+..|+|+- +-++ -++++.+.+.|++.|. +..+-+...+..+++..++++...++.++.||+..
T Consensus 8 t~~IGvi~-~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~ 77 (302)
T 2qh8_A 8 TAKVAVSQ-IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIA 77 (302)
T ss_dssp CEEEEEEE-SSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEES
T ss_pred CcEEEEEE-eccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 34688874 4444 2456777888888887 77777888999999999999888888888888764
No 77
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=80.20 E-value=4.4 Score=31.03 Aligned_cols=58 Identities=14% Similarity=0.246 Sum_probs=47.4
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
...|++++.+.+| ....+.+.+.+++.|+ ++.+...+ .++...++++.+.+++++-+|
T Consensus 5 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~-~~~~~~~~~~~l~~~~vdgiI 65 (280)
T 3gyb_A 5 TQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGY--RLSVIDSL-TSQAGTDPITSALSMRPDGII 65 (280)
T ss_dssp CCEEEEEESCTTSGGGHHHHHHHHHHHGGGTC--EEEEECSS-SSCSSSCHHHHHHTTCCSEEE
T ss_pred cCEEEEEeCCCCChHHHHHHHHHHHHHHHCCC--EEEEEeCC-CchHHHHHHHHHHhCCCCEEE
Confidence 3579999988776 5677888888999985 77788888 888888888888888899888
No 78
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=79.51 E-value=12 Score=29.30 Aligned_cols=63 Identities=19% Similarity=0.304 Sum_probs=47.1
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
+.+|+|++-+.++ ....+.+.+.++++|+ ++.+...+..++.-.++++.+.+++++.||...-
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~ 68 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGY--KTDLQYADDDIPNQLSQIENMVTKGVKVLVIASI 68 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCC--EEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3579999887665 2345667778888885 5666778888988888888887778888887654
No 79
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=79.46 E-value=7.2 Score=32.51 Aligned_cols=62 Identities=19% Similarity=0.124 Sum_probs=43.5
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
+.++.||.=..|. ....+++...|++.|+++++... ..+....++++++..++++++|++-|
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t---~~~~~a~~~~~~~~~~~~d~vvv~GG 89 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYAT---EKIGDATLEAERAMHENYDVLIAAGG 89 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEEC---CSTTHHHHHHHHHTTTTCSEEEEEEC
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEe---cCcchHHHHHHHHhhcCCCEEEEEcC
Confidence 3468888654443 46678999999999987776543 24456667777776777888887655
No 80
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=79.06 E-value=10 Score=29.65 Aligned_cols=62 Identities=18% Similarity=0.205 Sum_probs=45.2
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+|++++.+.+| ....+.+.+.+++.|+ ++.+......++...++++.+.+++++-||....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 67 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPV 67 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 368999887665 2345667788889985 5666677778888888888777777888777543
No 81
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=79.02 E-value=14 Score=30.31 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=39.2
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCc---------hHHHHHHHHHhhCCCeEEEEe
Q 029926 112 TPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNR---------KGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 112 ~~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVaSAHRtP---------e~l~ey~k~ae~~GikVIIAv 174 (185)
+++|.||.||..- ...++.+.+.|++-|+ ++.++.....| +.+.++.+...+ ++.||-+
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~--eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~--AD~iI~~ 105 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGA--EVKVFDPSGLPLPDAAPVSHPKVQELRELSIW--SEGQVWV 105 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTC--EEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH--CSEEEEE
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCC--EEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH--CCEEEEE
Confidence 4589999999752 4456777777887786 55566555544 567777776666 4555544
No 82
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=78.99 E-value=12 Score=28.57 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=47.4
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
...|++++.+.+|- ...+.+.+.+++.|+ ++.+...+..++...++++.+.+++++-+|...
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~ 72 (277)
T 3e61_A 8 SKLIGLLLPDMSNPFFTLIARGVEDVALAHGY--QVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA 72 (277)
T ss_dssp --CEEEEESCTTSHHHHHHHHHHHHHHHHTTC--CEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 34699999876662 346677778888886 556778888999988999888888898888754
No 83
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=78.91 E-value=9.1 Score=29.78 Aligned_cols=62 Identities=6% Similarity=0.087 Sum_probs=43.9
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 111 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 111 ~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
....|++++ +.+| ....+.+.+.+++.|+ ++.+...+..++ -.++++...+++++-+|....
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~ 75 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGY--DVMLSAVAPSRA-EKVAVQALMRERCEAAILLGT 75 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTC--EEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETC
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECC
Confidence 345799999 6665 2456777888889985 666677776666 667777777788888887654
No 84
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=78.42 E-value=2 Score=35.03 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=28.8
Q ss_pred CCCCeEEEEeccCCCH-----HHHHHHHHHHHHhCCCeeEEEEc
Q 029926 110 TDTPIVGIIMESDSDL-----PVMNDAARTLSDFGVPYEIKILS 148 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl-----~vmekA~~vLeefGIpyEvrVaS 148 (185)
.|+.+|+|++|+.|+. ..++.+.+.|++.|+ ++..+.
T Consensus 11 ~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~--~v~~i~ 52 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGI--DAHPFD 52 (317)
T ss_dssp GGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTC--EEEEEC
T ss_pred hhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCC--EEEEEe
Confidence 4567899999999983 467888899999986 455555
No 85
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=78.33 E-value=14 Score=29.88 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=46.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh--------------CCCeEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE--------------RGIKIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~--------------~GikVIIAvAG~A 178 (185)
.+.++|.|. . ...+.++..|.+.| .++.|. +|++++.+++.+.... .+++++|..+|..
T Consensus 119 ~k~vlViGa-G--g~g~a~a~~L~~~G--~~V~v~--~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 119 GLRILLIGA-G--GASRGVLLPLLSLD--CAVTIT--NRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp TCEEEEECC-S--HHHHHHHHHHHHTT--CEEEEE--CSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHcC--CEEEEE--ECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCC
Confidence 457778887 3 68899999999999 466664 7999999888865321 3689999999865
Q ss_pred Cc
Q 029926 179 AH 180 (185)
Q Consensus 179 Ah 180 (185)
.+
T Consensus 192 ~~ 193 (271)
T 1nyt_A 192 IS 193 (271)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 86
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=78.28 E-value=17 Score=28.04 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=45.1
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+|+++.-+.+| ....+.+.+.++++|+ ++.+... ..+++..++++.+.+++++.||....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~ 66 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGF--EVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTP 66 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTE--EEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 368888887766 3456677778888884 5566666 48888888888888888888877654
No 87
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=77.74 E-value=12 Score=24.44 Aligned_cols=56 Identities=13% Similarity=-0.022 Sum_probs=37.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeE
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKI 170 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikV 170 (185)
|+++|.+...+ .=+.++++...|++.|++|+..=+. ..|+...++.+.....++-+
T Consensus 4 ~m~~v~ly~~~--~C~~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~~~~~vP~ 59 (92)
T 2khp_A 4 SMVDVIIYTRP--GCPYCARAKALLARKGAEFNEIDAS--ATPELRAEMQERSGRNTFPQ 59 (92)
T ss_dssp CCCCEEEEECT--TCHHHHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHHHHTSSCCCE
T ss_pred CcccEEEEECC--CChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHhCCCCcCE
Confidence 44456666544 3489999999999999998765544 45666666765554445543
No 88
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=77.64 E-value=11 Score=28.84 Aligned_cols=64 Identities=16% Similarity=0.076 Sum_probs=48.3
Q ss_pred CCCeEEEEecc-----CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 111 DTPIVGIIMES-----DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 111 ~~~kVaIIMGS-----~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
....|++++.+ .+| ....+.+.+.+++.|. ++.+...+-.++...++++.+.+++++-+|....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~ 78 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGY--ALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYS 78 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCC
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 34579999987 444 2556778888899985 6677778878888888888888888988887543
No 89
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=77.51 E-value=13 Score=26.40 Aligned_cols=51 Identities=24% Similarity=0.330 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029926 128 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 182 (185)
Q Consensus 128 mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLP 182 (185)
++++.+.++..|++++..+.. -+-...+++.+++.+++.||.++-+...+.
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~----G~~~~~I~~~a~~~~~dlIV~G~~g~~~~~ 135 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVV----GIPHEEIVKIAEDEGVDIIIMGSHGKTNLK 135 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE----ECHHHHHHHHHHHTTCSEEEEESCCSSCCT
T ss_pred HHHHHHHHHHcCCceEEEEcC----CCHHHHHHHHHHHcCCCEEEEcCCCCCCcc
Confidence 344555556679988877654 223445666677778998888876544443
No 90
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=77.37 E-value=25 Score=27.81 Aligned_cols=65 Identities=9% Similarity=0.117 Sum_probs=48.4
Q ss_pred CCeEEEEecc-CC-CH--HHHHHHHHHHHHhCCCeeEEEEcCC--CCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 112 TPIVGIIMES-DS-DL--PVMNDAARTLSDFGVPYEIKILSPH--QNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 112 ~~kVaIIMGS-~S-Dl--~vmekA~~vLeefGIpyEvrVaSAH--RtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
...|++++.+ .+ ++ ...+.+.+.+++.|..+.+.+...+ -.++...++++.+..++++-||. .+.
T Consensus 43 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi-~~~ 113 (342)
T 1jx6_A 43 PIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIF-TLD 113 (342)
T ss_dssp CEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTCSEEEE-CCS
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEE-eCC
Confidence 3479999876 33 33 5677888889999988777665666 57887778888887888988887 443
No 91
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=77.30 E-value=18 Score=28.04 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=46.2
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
...|++++-..+| ....+.+.+.+++.|. ++.+......++...++++...+++++-+|...
T Consensus 16 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 80 (289)
T 2fep_A 16 TTTVGVIIPDISSIFYSELARGIEDIATMYKY--NIILSNSDQNMEKELHLLNTMLGKQVDGIVFMG 80 (289)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCeEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 3479999976555 3456677788888885 566667777888888888888788898877654
No 92
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=77.14 E-value=20 Score=27.24 Aligned_cols=62 Identities=18% Similarity=0.180 Sum_probs=50.3
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
..|++++.+.+| ..+.+.+.+.+++.|+ ++.+...+..++...++++.+.+++++-+|....
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 80 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGY--SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPT 80 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecc
Confidence 579999988776 3567788888899886 6677788889999899998888889988887654
No 93
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=77.01 E-value=21 Score=27.25 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=45.7
Q ss_pred CeEEEEeccCC--C---HHHHHHHHHHHHHhCCCeeEEEEcC--CCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 113 PIVGIIMESDS--D---LPVMNDAARTLSDFGVPYEIKILSP--HQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 113 ~kVaIIMGS~S--D---l~vmekA~~vLeefGIpyEvrVaSA--HRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
..|++++-+.+ | ....+.+.+.+++.|. ++.+... +..++...++++.+..++++.+|.....
T Consensus 6 ~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~ 75 (289)
T 3brs_A 6 YYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEI--KLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAAD 75 (289)
T ss_dssp CEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSC
T ss_pred cEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCC--EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 46999987655 4 2345667778888885 5666655 6788888888888878889888876543
No 94
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=76.95 E-value=1.7 Score=37.69 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=43.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+|.||+|... ....+++.+. |+-...+.-..+|.+.+.+++.++.+++.++++|||+-|++.
T Consensus 39 rvliVtd~~~-~~~~~~v~~~---L~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~ 100 (364)
T 3iv7_A 39 KVMVIAGERE-MSIAHKVASE---IEVAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGST 100 (364)
T ss_dssp SEEEECCGGG-HHHHHHHTTT---SCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHH
T ss_pred EEEEEECCCH-HHHHHHHHHH---cCCCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHH
Confidence 6999998864 3444444444 442222333346788899999999999999999999999864
No 95
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=76.85 E-value=18 Score=27.98 Aligned_cols=63 Identities=8% Similarity=0.010 Sum_probs=46.0
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHH---HHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS---YALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~e---y~k~ae~~GikVIIAvAG 176 (185)
...|++++-..+| ....+.+.+.+++.|. ++.+....-.++...+ +++...+++++-+|....
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 76 (290)
T 2rgy_A 8 LGIIGLFVPTFFGSYYGTILKQTDLELRAVHR--HVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISH 76 (290)
T ss_dssp CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTC--EEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEeCCCCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecC
Confidence 3579999876555 3456677788888885 5667777777777777 888777888988877653
No 96
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=76.74 E-value=11 Score=26.18 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCC-CeeEEEEcCCCCchHHHHHHH-HHhhCCCeEEEEecCccCcCcC
Q 029926 128 MNDAARTLSDFGV-PYEIKILSPHQNRKGALSYAL-SAKERGIKIIIVGDGVEAHLSG 183 (185)
Q Consensus 128 mekA~~vLeefGI-pyEvrVaSAHRtPe~l~ey~k-~ae~~GikVIIAvAG~AAhLPG 183 (185)
++++.+.+++.|+ +++..+..- +-..++++ .+++.+++.+|.++-....+.+
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~~g----~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~ 124 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEISYG----IPKHTIEDYAKQHPEIDLIVLGATGTNSPHR 124 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEE----CHHHHHHHHHHHSTTCCEEEEESCCSSCTTT
T ss_pred HHHHHHHHHhcCCcceEEEEecC----ChHHHHHHHHHhhcCCCEEEECCCCCCCcce
Confidence 4455556667788 888777643 23455666 6777889999988765554443
No 97
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=76.74 E-value=15 Score=25.25 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhCCCe---eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029926 126 PVMNDAARTLSDFGVPY---EIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 182 (185)
Q Consensus 126 ~vmekA~~vLeefGIpy---EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLP 182 (185)
...+++.+.+++.|+++ +..+..- .| ..++++.+++.+++.+|.++-....+.
T Consensus 70 ~~l~~~~~~~~~~g~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~~~ 125 (147)
T 3hgm_A 70 EIAVQAKTRATELGVPADKVRAFVKGG--RP--SRTIVRFARKRECDLVVIGAQGTNGDK 125 (147)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEES--CH--HHHHHHHHHHTTCSEEEECSSCTTCCS
T ss_pred HHHHHHHHHHHhcCCCccceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCcccc
Confidence 34556667778889998 7777643 33 455667777788999999876554443
No 98
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=76.69 E-value=7.1 Score=30.88 Aligned_cols=62 Identities=10% Similarity=0.051 Sum_probs=37.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHH-hCCCeeEEEEcCC-----------CCchHHHHHHHHHhhCCCeEEEEe
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSD-FGVPYEIKILSPH-----------QNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLee-fGIpyEvrVaSAH-----------RtPe~l~ey~k~ae~~GikVIIAv 174 (185)
|+++|+||.||.+.-..-.+.++.+.+ +.=..++.++... ..|+.+.++.+..++ ++.||-+
T Consensus 1 M~k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~--aD~~ii~ 74 (190)
T 3u7r_A 1 MVKTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEH--SDAVLAI 74 (190)
T ss_dssp -CEEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHT--SSEEEEE
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHh--CCcEEEe
Confidence 556899999998876555555554443 2234567776642 246677777776655 4444444
No 99
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=76.26 E-value=25 Score=27.28 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=46.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCC--CCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPH--QNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAH--RtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+|++++.+.+|- ...+.+.+.++++|+ ++.+.... ..++...++++.+.+++++.||....
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~ 70 (297)
T 3rot_A 4 DKYYLITHGSQDPYWTSLFQGAKKAAEELKV--DLQILAPPGANDVPKQVQFIESALATYPSGIATTIP 70 (297)
T ss_dssp CEEEEECSCCCSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCC
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCc--EEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 4689998876552 345667778888885 56666665 68888889998888888988886544
No 100
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=75.32 E-value=22 Score=27.34 Aligned_cols=62 Identities=10% Similarity=0.050 Sum_probs=43.2
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEc-CCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaS-AHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+|+++....++ ....+.+.+.++++| |++.+.. .+..+++..++++.+..++++.+|....
T Consensus 5 ~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~ 70 (303)
T 3d02_A 5 KTVVNISKVDGMPWFNRMGEGVVQAGKEFN--LNASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPN 70 (303)
T ss_dssp EEEEEECSCSSCHHHHHHHHHHHHHHHHTT--EEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEEeccCCChHHHHHHHHHHHHHHHcC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 468888765544 244566777788887 4565543 6778888888888777788888877653
No 101
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=75.31 E-value=12 Score=24.51 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=37.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC---chHHHHHHHHHhhCCCeEEEE
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN---RKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt---Pe~l~ey~k~ae~~GikVIIA 173 (185)
+++|-|...+ .=+.++++...|+++|++|+..-+..... ++...++.+.....++-+++.
T Consensus 11 M~~v~ly~~~--~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~ 73 (92)
T 3ic4_A 11 MAEVLMYGLS--TCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK 73 (92)
T ss_dssp CSSSEEEECT--TCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE
T ss_pred CceEEEEECC--CChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE
Confidence 3456666544 34899999999999999998766553221 222355555444445555443
No 102
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=74.61 E-value=8.1 Score=25.35 Aligned_cols=55 Identities=16% Similarity=0.060 Sum_probs=36.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH-hhCCCeEE
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGIKII 171 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a-e~~GikVI 171 (185)
|+++|.+...+ .=+.++++...|++.|++|+..=+. ++...++.+.. ...++-++
T Consensus 4 mm~~v~~y~~~--~C~~C~~~~~~L~~~~i~~~~vdv~----~~~~~~l~~~~~~~~~vP~l 59 (89)
T 2klx_A 4 SMKEIILYTRP--NCPYCKRARDLLDKKGVKYTDIDAS----TSLRQEMVQRANGRNTFPQI 59 (89)
T ss_dssp CCCCEEEESCS--CCTTTHHHHHHHHHHTCCEEEECSC----HHHHHHHHHHHHSSCCSCEE
T ss_pred CcceEEEEECC--CChhHHHHHHHHHHcCCCcEEEECC----HHHHHHHHHHhCCCCCcCEE
Confidence 44556665433 3478999999999999998654443 66666777655 44455444
No 103
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=74.59 E-value=11 Score=27.40 Aligned_cols=58 Identities=10% Similarity=0.064 Sum_probs=37.4
Q ss_pred CeEEEEeccC---CCHHHHHHHHHHHHHhCCC---eeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 113 PIVGIIMESD---SDLPVMNDAARTLSDFGVP---YEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 113 ~kVaIIMGS~---SDl~vmekA~~vLeefGIp---yEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
.+|.|.|-|+ ..=+.+++|.+.|+++||+ |+..=+. ..++...++.+....+.+ .|||
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~--~~~~~~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVL--EDPELREGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECT--TCHHHHHHHHHHHTCCSSCEEEE
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEec--CCHHHHHHHHHHhCCCCCCeEEE
Confidence 3588888765 3578999999999999999 5443333 445555555443333333 6665
No 104
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=74.27 E-value=21 Score=28.27 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=45.9
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCC--CeEEEEecC
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERG--IKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~G--ikVIIAvAG 176 (185)
..|+++..+.+| ....+.+.+.+++.|+. +.+....-.++...++++.+.+++ ++.||....
T Consensus 6 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~ 72 (332)
T 2rjo_A 6 TTLACSFRSLTNPYYTAFNKGAQSFAKSVGLP--YVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPN 72 (332)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCC--EEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cEEEEEecCCCcHHHHHHHHHHHHHHHHcCCE--EEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCC
Confidence 469999876665 34567778888899865 556677778888888888777777 888877543
No 105
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=74.19 E-value=11 Score=30.33 Aligned_cols=66 Identities=14% Similarity=0.037 Sum_probs=50.2
Q ss_pred CCeEEEEe-ccCCCHHHH-HHHHHHHHHhCC----CeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 112 TPIVGIIM-ESDSDLPVM-NDAARTLSDFGV----PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 112 ~~kVaIIM-GS~SDl~vm-ekA~~vLeefGI----pyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
..+|+|+- -.+--++-+ +...+.|++.|. +.++.+-.|...+....+++++..++++++||+++--
T Consensus 8 ~~~igi~q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~~~~DlIiai~t~ 79 (302)
T 3lkv_A 8 TAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATP 79 (302)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEESHH
T ss_pred CceEEEEEeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHhcCCcEEEEcCCH
Confidence 45799873 233334433 446778888875 5788899999999999999999989999999998643
No 106
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=73.81 E-value=28 Score=26.97 Aligned_cols=61 Identities=11% Similarity=0.151 Sum_probs=44.2
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEc--CCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 114 IVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILS--PHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 114 kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaS--AHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.|+++.-+.+|- ...+.+.+.+++.|+ ++.+.. .+..++.-.++++....++++-+|....
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~ 68 (288)
T 1gud_A 3 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGV--SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 68 (288)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTC--CEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 588888765552 345667778888984 566666 6778888888888777777888777654
No 107
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=73.71 E-value=29 Score=26.74 Aligned_cols=60 Identities=12% Similarity=0.336 Sum_probs=42.3
Q ss_pred eEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 114 IVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 114 kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.|++++-..+| ....+.+.+.+++.|+ ++.+......+++-.++++...+++++-||...
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 65 (283)
T 2ioy_A 3 TIGLVISTLNNPFFVTLKNGAEEKAKELGY--KIIVEDSQNDSSKELSNVEDLIQQKVDVLLINP 65 (283)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 58888876665 2456667777888885 556666777777777777777777787777654
No 108
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=73.69 E-value=11 Score=31.41 Aligned_cols=61 Identities=21% Similarity=0.370 Sum_probs=40.9
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDL-PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl-~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+++||.=..|.- ...+++.+.|++.|+++++.... .+....++++++...+++++|++-|
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~---~~~~~~~~~~~~~~~~~d~vvv~GG 91 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW---EKGDAARYVEEARKFGVATVIAGGG 91 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC---STTHHHHHHHHHHHHTCSEEEEEES
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec---CcchHHHHHHHHHhcCCCEEEEEcc
Confidence 4577775433321 66788999999999988776543 2455666666665566888877655
No 109
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=73.41 E-value=15 Score=27.82 Aligned_cols=61 Identities=8% Similarity=0.000 Sum_probs=43.2
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
..|++++...+| ....+.+.+.+++.|. ++.+....-.++...++++....++++-+|...
T Consensus 4 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~ 67 (275)
T 3d8u_A 4 YSIALIIPSLFEKACAHFLPSFQQALNKAGY--QLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFG 67 (275)
T ss_dssp CEEEEEESCSSCHHHHHHHHHHHHHHHHTSC--EECCEECTTCHHHHHHHHHHHHTSCCCCEEEES
T ss_pred eEEEEEeCCCccccHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeC
Confidence 468888876555 3456677778888886 455556677788777888877777887766554
No 110
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=72.84 E-value=3.8 Score=32.49 Aligned_cols=63 Identities=10% Similarity=0.007 Sum_probs=41.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCc
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAH 180 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAh 180 (185)
.|+.++.+++....-.+ .+.+++++++. ++.|.- -+.++..+.++.. +.|++|||+--|.++.
T Consensus 2 ~~~~~I~~iapy~~l~~---~~~~i~~e~~~--~i~i~~--~~l~~~v~~a~~~-~~~~dVIISRGgta~~ 64 (196)
T 2q5c_A 2 SLSLKIALISQNENLLN---LFPKLALEKNF--IPITKT--ASLTRASKIAFGL-QDEVDAIISRGATSDY 64 (196)
T ss_dssp CCCCEEEEEESCHHHHH---HHHHHHHHHTC--EEEEEE--CCHHHHHHHHHHH-TTTCSEEEEEHHHHHH
T ss_pred CCCCcEEEEEccHHHHH---HHHHHHhhhCC--ceEEEE--CCHHHHHHHHHHh-cCCCeEEEECChHHHH
Confidence 35567888876644334 44555666766 444432 3367778888777 8899999998776543
No 111
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=72.81 E-value=19 Score=27.65 Aligned_cols=61 Identities=11% Similarity=0.196 Sum_probs=45.3
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
..|++++.. ++- ...+.+.+.+++.|+ ++.+....-.++...++++...+++++-+|....
T Consensus 9 ~~Igvi~~~-~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 72 (288)
T 2qu7_A 9 NIIAFIVPD-QNPFFTEVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPV 72 (288)
T ss_dssp EEEEEEESS-CCHHHHHHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCS
T ss_pred CEEEEEECC-CCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecC
Confidence 469999977 542 456667778888886 5566677778888888888887888988887654
No 112
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=72.75 E-value=14 Score=28.60 Aligned_cols=62 Identities=8% Similarity=0.178 Sum_probs=43.8
Q ss_pred CCeEEEEeccCCC-----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIMESDSD-----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SD-----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
...|+|++.+.+| ....+.+.+.+++.|. ++.+......++...++.+...+++++-+|...
T Consensus 8 s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 74 (288)
T 3gv0_A 8 TNVIALVLSVDEELMGFTSQMVFGITEVLSTTQY--HLVVTPHIHAKDSMVPIRYILETGSADGVIISK 74 (288)
T ss_dssp CCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSC--EEEECCBSSGGGTTHHHHHHHHHTCCSEEEEES
T ss_pred CCEEEEEecCCccccHHHHHHHHHHHHHHHHcCC--EEEEecCCcchhHHHHHHHHHHcCCccEEEEec
Confidence 4579999987665 3446667777788874 666777777777767777766677787777653
No 113
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=72.52 E-value=15 Score=25.18 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=38.2
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 114 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 114 kVaIIMGS~---SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
+|.|.+.+. +.=+.++++...|+++||+|+..=+.. .|+...++.+.....++ .|||
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~--~~~~~~~l~~~~g~~~vP~v~i 78 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKAYSNWPTYPQLYV 78 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC--CHHHHHHHHHHHCCCCCCeEEE
Confidence 366666433 566899999999999999987665554 46655555554444455 4444
No 114
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=72.50 E-value=15 Score=26.82 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=37.8
Q ss_pred CeEEEEeccC---CCHHHHHHHHHHHHHhCCC-eeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 113 PIVGIIMESD---SDLPVMNDAARTLSDFGVP-YEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 113 ~kVaIIMGS~---SDl~vmekA~~vLeefGIp-yEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
.+|.|.|-++ ..=|.++++.+.|+++||+ |+..=+.- .|+...++.+......+ .|||
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~--d~~~~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPELRQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC--CHHHHHHHHHHhCCCCcCeEEE
Confidence 3588888764 3578999999999999996 87665553 45555555443322323 5555
No 115
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=72.49 E-value=15 Score=30.20 Aligned_cols=26 Identities=15% Similarity=0.066 Sum_probs=16.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.||+||+|+.+ -+.+.+++.|-+-|-
T Consensus 9 gKvalVTGas~--GIG~aia~~la~~Ga 34 (255)
T 4g81_D 9 GKTALVTGSAR--GLGFAYAEGLAAAGA 34 (255)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 56888888876 344555555555554
No 116
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=72.47 E-value=3.7 Score=34.53 Aligned_cols=41 Identities=12% Similarity=-0.004 Sum_probs=25.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHH
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGA 156 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l 156 (185)
++|.|| |+...-.-+....+.|++.|+ ++.+++.|..|...
T Consensus 5 ~~vLiV-~g~~~~~~a~~l~~aL~~~g~--~V~~i~~~~~~~~~ 45 (259)
T 3rht_A 5 TRVLYC-GDTSLETAAGYLAGLMTSWQW--EFDYIPSHVGLDVG 45 (259)
T ss_dssp -CEEEE-ESSCTTTTHHHHHHHHHHTTC--CCEEECTTSCBCSS
T ss_pred ceEEEE-CCCCchhHHHHHHHHHHhCCc--eEEEecccccccCh
Confidence 578888 444444456667778888775 45556666555433
No 117
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=72.32 E-value=9.4 Score=26.56 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=37.5
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 114 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 114 kVaIIMGS~---SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
+|.|.+-+. +.=+.+++|...|+++||+|+..=+.. .|+...++.+......+ .|||
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~--~~~~~~~l~~~~g~~~vP~ifi 76 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKTFSNWPTYPQLYV 76 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS--CHHHHHHHHHHHSCCSSCEEEC
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC--CHHHHHHHHHHhCCCCCCEEEE
Confidence 466666543 455789999999999999987665554 46655556544433444 4443
No 118
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=72.32 E-value=12 Score=29.01 Aligned_cols=62 Identities=6% Similarity=0.052 Sum_probs=44.4
Q ss_pred CeEEEEecc-C---CC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMES-D---SD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS-~---SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
..|++++-. . +| ....+.+.+.+++.|. ++.+......++...++++...+++++-+|....
T Consensus 5 ~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (287)
T 3bbl_A 5 FMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNY--FVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSI 73 (287)
T ss_dssp CEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTC--EEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSC
T ss_pred eEEEEEecccccccCChhHHHHHHHHHHHHHHcCC--EEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeec
Confidence 468888765 3 33 4567778888889885 5666666667777777777777788888777653
No 119
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=72.31 E-value=19 Score=25.79 Aligned_cols=50 Identities=14% Similarity=0.039 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCeeE--EEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029926 128 MNDAARTLSDFGVPYEI--KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 181 (185)
Q Consensus 128 mekA~~vLeefGIpyEv--rVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhL 181 (185)
.+++.+.++..|++++. .+..- +-...+++.+++.+++.||.++-....+
T Consensus 80 l~~~~~~~~~~g~~~~~~~~~~~g----~~~~~I~~~a~~~~~DlIV~G~~g~~~~ 131 (170)
T 2dum_A 80 LQEKAEEVKRAFRAKNVRTIIRFG----IPWDEIVKVAEEENVSLIILPSRGKLSL 131 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCCCC-
T ss_pred HHHHHHHHHHcCCceeeeeEEecC----ChHHHHHHHHHHcCCCEEEECCCCCCcc
Confidence 44455556667888877 66532 2344566667777888888877654443
No 120
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=72.30 E-value=2 Score=36.00 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=39.6
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCe--------------------------eEEEEcCCCCchHHHHHHHHHhhCCC
Q 029926 115 VGIIMESDSDLPVMNDAARTLSDFGVPY--------------------------EIKILSPHQNRKGALSYALSAKERGI 168 (185)
Q Consensus 115 VaIIMGS~SDl~vmekA~~vLeefGIpy--------------------------EvrVaSAHRtPe~l~ey~k~ae~~Gi 168 (185)
|.+=+.+=.=..+++++.+.|+++|+.. +.+|-|-.=++++++++++++.++|+
T Consensus 12 ~i~~~f~W~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi 91 (496)
T 4gqr_A 12 SIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGV 91 (496)
T ss_dssp EEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTC
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCC
Confidence 3344444332345677888889999852 12333333378999999999999999
Q ss_pred eEEE
Q 029926 169 KIII 172 (185)
Q Consensus 169 kVII 172 (185)
+||+
T Consensus 92 ~Vil 95 (496)
T 4gqr_A 92 RIYV 95 (496)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 121
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=72.27 E-value=28 Score=28.19 Aligned_cols=60 Identities=10% Similarity=0.159 Sum_probs=41.7
Q ss_pred CeEEEEe--ccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIM--ESDSDL----PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIM--GS~SDl----~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|++|. |..+|. .+.+.+.+.++++|+ ++.+...+- +.+..++++.+.+++++.||...
T Consensus 5 ~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~--~~~~~~~~~-~~~~~~~l~~l~~~~~dgIi~~~ 70 (318)
T 2fqx_A 5 FVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNA--KCKYVTAST-DAEYVPSLSAFADENMGLVVACG 70 (318)
T ss_dssp CEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTC--EEEEEECCS-GGGHHHHHHHHHHTTCSEEEEES
T ss_pred cEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCC--eEEEEeCCC-HHHHHHHHHHHHHcCCCEEEECC
Confidence 4688887 467773 345666778889985 555555543 44456778888888899988864
No 122
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=71.81 E-value=29 Score=27.63 Aligned_cols=62 Identities=11% Similarity=0.169 Sum_probs=46.7
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
...|++++...+|- ...+.+.+.+++.|. ++.+...+..++...++++....++++-+|...
T Consensus 58 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 122 (340)
T 1qpz_A 58 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMC 122 (340)
T ss_dssp CSEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeC
Confidence 45799999766552 456677788888885 566677788888888888888788898877654
No 123
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=71.78 E-value=32 Score=27.09 Aligned_cols=28 Identities=18% Similarity=0.018 Sum_probs=18.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 13 l~gk~~lVTGas~--gIG~a~a~~la~~G~ 40 (280)
T 3pgx_A 13 LQGRVAFITGAAR--GQGRSHAVRLAAEGA 40 (280)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 3457888888877 345555666655554
No 124
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=71.61 E-value=1.4 Score=37.56 Aligned_cols=64 Identities=14% Similarity=0.004 Sum_probs=46.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCCchHHHHHHHHHhhCCC---eEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS---AHRtPe~l~ey~k~ae~~Gi---kVIIAvAG~A 178 (185)
.+|.||++........++..+.|++-+ +++.+.. +|.+.+.+.+..+.+.+.|+ +++||+-|++
T Consensus 27 ~~~livtd~~v~~~~~~~v~~~L~~~~--~~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGs 96 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALE--VRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGV 96 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSC--EEEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhCC--cEEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECChH
Confidence 369999876543335666666665443 4445543 57788999999999999889 9999999875
No 125
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=70.45 E-value=21 Score=30.15 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=40.2
Q ss_pred CCCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCC----------chHHHHHHHHHhhCCCeEEEEe
Q 029926 111 DTPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQN----------RKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 111 ~~~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVaSAHRt----------Pe~l~ey~k~ae~~GikVIIAv 174 (185)
++++|.||.||... ...++.+.+.|++.|+ ++.++..... |+.+.++.+...+ ++.||-+
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~--eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~--ADgiV~a 130 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGA--ETRIFDPSDLPLPDQVQSDDHPAVKELRALSEW--SEGQVWC 130 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTC--EEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHH--CSEEEEE
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCC--EEEEEehhcCCCCccCccCCCHHHHHHHHHHHH--CCeEEEE
Confidence 45689999999753 4567777888888887 4555555443 4667777777666 4444443
No 126
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=70.19 E-value=15 Score=28.36 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=37.1
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEE-cCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKIL-SPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVa-SAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...|++++...+| ....+.+.+.+++.|+ ++.+. .....++...++++....++++-+|....
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 74 (290)
T 3clk_A 8 SNVIAAVVSSVRTNFAQQILDGIQEEAHKNGY--NLIIVYSGSADPEEQKHALLTAIERPVMGILLLSI 74 (290)
T ss_dssp CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTC--EEEEEC----------CHHHHHHSSCCSEEEEESC
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Confidence 3579999865444 3456677788888885 56666 66667777677777777778887776543
No 127
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=70.00 E-value=19 Score=29.27 Aligned_cols=59 Identities=19% Similarity=0.129 Sum_probs=44.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHh-------------------hCCCeEEEE
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-------------------ERGIKIIIV 173 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae-------------------~~GikVIIA 173 (185)
.+.++|+|. + .+.+.++..|.+.| ++.| .+|++++.+++.+... -.+++++|.
T Consensus 128 ~k~vlV~Ga-G--giG~aia~~L~~~G---~V~v--~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn 199 (287)
T 1nvt_A 128 DKNIVIYGA-G--GAARAVAFELAKDN---NIII--ANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIIN 199 (287)
T ss_dssp SCEEEEECC-S--HHHHHHHHHHTSSS---EEEE--ECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEE
T ss_pred CCEEEEECc-h--HHHHHHHHHHHHCC---CEEE--EECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEE
Confidence 457888897 4 88999999999998 4444 5899998888765432 135799999
Q ss_pred ecCccC
Q 029926 174 GDGVEA 179 (185)
Q Consensus 174 vAG~AA 179 (185)
.+|...
T Consensus 200 ~ag~~~ 205 (287)
T 1nvt_A 200 ATPIGM 205 (287)
T ss_dssp CSCTTC
T ss_pred CCCCCC
Confidence 998654
No 128
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=69.94 E-value=24 Score=27.05 Aligned_cols=60 Identities=13% Similarity=0.012 Sum_probs=35.3
Q ss_pred CCCeEEEEeccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCC-----------CchHHHHHHHHHhhCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSDL----PVMNDAARTLSDFGVPYEIKILSPHQ-----------NRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl----~vmekA~~vLeefGIpyEvrVaSAHR-----------tPe~l~ey~k~ae~~GikVIIAvA 175 (185)
|+++|.||.||...- ..++.+.+.++ -| .++.++.... .|+.+.++.+...+ ++.||-+.
T Consensus 1 MM~kilii~gS~r~~s~t~~la~~~~~~~~-~~--~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~--AD~iV~~s 75 (192)
T 3fvw_A 1 MSKRILFIVGSFSEGSFNRQLAKKAETIIG-DR--AQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQE--ADAIWIFS 75 (192)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHHHHT-TS--SEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHH--CSEEEEEC
T ss_pred CCCEEEEEEcCCCCCCHHHHHHHHHHHhcC-CC--CEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHh--CCEEEEEC
Confidence 346899999998643 33444444444 23 4555655443 34567777777766 56666554
No 129
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=69.40 E-value=25 Score=30.29 Aligned_cols=69 Identities=16% Similarity=0.186 Sum_probs=48.4
Q ss_pred CCCCeEEEEeccCC------CHHHHHHHHHHHHHhCCCeeEEEE-cCCCC--------chHHHHHHHHHhhCCCeEEEEe
Q 029926 110 TDTPIVGIIMESDS------DLPVMNDAARTLSDFGVPYEIKIL-SPHQN--------RKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 110 ~~~~kVaIIMGS~S------Dl~vmekA~~vLeefGIpyEvrVa-SAHRt--------Pe~l~ey~k~ae~~GikVIIAv 174 (185)
.|.-+|+||.=|.. +.+..+.+.+.|+++|... .+. .+.+. -+++.++.+...+..++.|+++
T Consensus 3 ~~~D~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v--~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~ 80 (346)
T 4eys_A 3 AMVSTIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNP--IFLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCA 80 (346)
T ss_dssp -CCCEEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEE--EECTTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred ccCcEEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEE--EECCchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEc
Confidence 35567999985542 3567899999999999854 332 23232 3566677777778889999999
Q ss_pred cCccCc
Q 029926 175 DGVEAH 180 (185)
Q Consensus 175 AG~AAh 180 (185)
-|+-+.
T Consensus 81 rGG~g~ 86 (346)
T 4eys_A 81 IGGDDT 86 (346)
T ss_dssp CCCSCG
T ss_pred ccccCH
Confidence 998543
No 130
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=69.29 E-value=31 Score=26.61 Aligned_cols=62 Identities=6% Similarity=-0.034 Sum_probs=44.9
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEE-EcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKI-LSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyEvrV-aSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+|+++.-+.+|- ...+.+.+.+++.|+ ++.+ ...+..++...++++.+.+++++.+|....
T Consensus 5 ~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 70 (305)
T 3g1w_A 5 ETYMMITFQSGMDYWKRCLKGFEDAAQALNV--TVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAI 70 (305)
T ss_dssp CEEEEEESSTTSTHHHHHHHHHHHHHHHHTC--EEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCS
T ss_pred ceEEEEEccCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 4677777665552 345677778888886 4555 467888888888888887888888877654
No 131
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=69.25 E-value=11 Score=25.49 Aligned_cols=46 Identities=13% Similarity=0.030 Sum_probs=31.1
Q ss_pred eEEEEeccCCCHHHH------HHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH
Q 029926 114 IVGIIMESDSDLPVM------NDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA 163 (185)
Q Consensus 114 kVaIIMGS~SDl~vm------ekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a 163 (185)
+|.|.+-+ -=+.+ ++|...|++.||+|+..=+..+ |+...++.+..
T Consensus 3 ~v~ly~~~--~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~--~~~~~~l~~~~ 54 (93)
T 1t1v_A 3 GLRVYSTS--VTGSREIKSQQSEVTRILDGKRIQYQLVDISQD--NALRDEMRTLA 54 (93)
T ss_dssp CEEEEECS--SCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC--HHHHHHHHHHT
T ss_pred CEEEEEcC--CCCCchhhHHHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHh
Confidence 46666543 34566 8999999999999987766643 65555555443
No 132
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=69.19 E-value=6.1 Score=26.74 Aligned_cols=57 Identities=16% Similarity=0.042 Sum_probs=43.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeE-------EE-EcCCCCchHHHHHHHHHhhCCCeE
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEI-------KI-LSPHQNRKGALSYALSAKERGIKI 170 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEv-------rV-aSAHRtPe~l~ey~k~ae~~GikV 170 (185)
.-.|-.|+-+|.+-+++...-|...|++..+ || +++..+.++..+..+..+..|++-
T Consensus 9 ~~~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~ 73 (81)
T 1uta_A 9 RWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTN 73 (81)
T ss_dssp BCCCBCCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSC
T ss_pred cEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCc
Confidence 3567789999999999999999999987422 22 346777888888888777767643
No 133
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=69.17 E-value=3 Score=33.68 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=54.6
Q ss_pred eeeeeccccchhhhhhhhhhhcCCCceeeec--cCCC----CCC------CCCeEEEEeccCC--CHHH-HHHHHHHHHH
Q 029926 73 IPVLASSNGSATSTRKDYSSVREPSTVFEEE--NANG----DST------DTPIVGIIMESDS--DLPV-MNDAARTLSD 137 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~e--a~~~----~~~------~~~kVaIIMGS~S--Dl~v-mekA~~vLee 137 (185)
-||+||.+-.| +=+++.+....++++|++| ++-. .+. ..+| .|++|..| |... +++....|++
T Consensus 8 ~NiVas~~l~~-~ldL~~ia~~~~n~eYePe~fpgli~R~~~Pk~~~lIF~SGK-iv~TGaks~e~~~~a~~~i~~~L~~ 85 (180)
T 1ytb_A 8 QNIVATVTLGC-RLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK-MVVTGAKSEDDSKLASRKYARIIQK 85 (180)
T ss_dssp EEEEEEEECCS-CCCHHHHHHHSSSEECCTTTCSSEEEEETTTTEEEEECTTSE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCC-ccCHHHHHhhCCCCEECccccCCEEEEeCCCcEEEEEECCCe-EEEEecCCHHHHHHHHHHHHHHHHH
Confidence 37888877777 6678888888888999888 3322 111 1123 35678555 4433 6677888999
Q ss_pred hCCCe---eEEE----EcCC-CCchHHHHHHH
Q 029926 138 FGVPY---EIKI----LSPH-QNRKGALSYAL 161 (185)
Q Consensus 138 fGIpy---EvrV----aSAH-RtPe~l~ey~k 161 (185)
+|++. +++| +|+- ..|=+++.++.
T Consensus 86 lg~~~~~~~~~i~NIvas~dl~~~I~Le~la~ 117 (180)
T 1ytb_A 86 IGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAF 117 (180)
T ss_dssp HTCCCCCEEEEEEEEEEEEECSSCBCHHHHHH
T ss_pred cCCCcccccceEEEEEEEEECCCccCHHHHHH
Confidence 99863 4443 4422 44556666664
No 134
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=69.13 E-value=7.2 Score=31.04 Aligned_cols=56 Identities=18% Similarity=0.165 Sum_probs=35.0
Q ss_pred CCeEEEEeccCCCH-----HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIMESDSDL-----PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SDl-----~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
+.+|+|++|+.|+. ...+.+.+.|++.| |++..+.....+..+.+. ..+++++.+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g--~~v~~i~~~~~~~~~~~~------~~~D~v~~~~ 63 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNK--YEIVPITLNEKMDLIEKA------KDIDFALLAL 63 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTT--EEEEEEECSSGGGHHHHT------TTCSEEEECC
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCC--CEEEEEcccCchhHHHhc------cCCCEEEEeC
Confidence 34799999998864 33555666667777 577777766444443221 3467666554
No 135
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=68.72 E-value=7.2 Score=31.02 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=44.5
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
....|++++...++ ....+.+.+.+++.|. ++.+...+-.++...++++....++++-+|...
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 124 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKY--NIILSNSDQNQDKELHLLNNMLGKQVDGIIFMS 124 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTC--EEEEEECCSHHHHHHHHHHHTSCCSSCCEEECC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEec
Confidence 34579999876544 3567778888889886 555666677777777888888778888777654
No 136
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.57 E-value=29 Score=25.89 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=39.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCCchHHHHHHHHHhhC---
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKER--- 166 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA----------------------HRtPe~l~ey~k~ae~~--- 166 (185)
+.++++|+|..+ -+...+++.|-+-|-.+.+.+++- -..++.+.++++...++
T Consensus 2 ~~k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 2 SPGSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp CCSEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 346888888877 456677777777673334443321 12244455555444321
Q ss_pred -CCeEEEEecCccC
Q 029926 167 -GIKIIIVGDGVEA 179 (185)
Q Consensus 167 -GikVIIAvAG~AA 179 (185)
+++++|-.||...
T Consensus 80 ~~id~li~~Ag~~~ 93 (250)
T 1yo6_A 80 DGLSLLINNAGVLL 93 (250)
T ss_dssp GCCCEEEECCCCCC
T ss_pred CCCcEEEECCcccC
Confidence 6899999998654
No 137
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=68.34 E-value=20 Score=26.62 Aligned_cols=60 Identities=15% Similarity=-0.040 Sum_probs=47.2
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee---------------EEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 116 GIIMESDSDLPVMNDAARTLSDFGVPYE---------------IKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 116 aIIMGS~SDl~vmekA~~vLeefGIpyE---------------vrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.++.|.-+-...++.....|..+|++.. +-++|......++.+.++.++++|++|+ ++.+
T Consensus 40 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~ 114 (186)
T 1m3s_A 40 IFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVA-ALTI 114 (186)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEE-EEES
T ss_pred EEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 4456666668999999999999998642 5678888888999999999999999875 4433
No 138
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=68.31 E-value=27 Score=27.30 Aligned_cols=43 Identities=7% Similarity=0.134 Sum_probs=25.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+.++++|+|..+ -+...+++.|-+-|. . |+-..|+++.+++..
T Consensus 6 ~~k~vlVTGas~--GIG~aia~~l~~~G~--~--V~~~~r~~~~~~~~~ 48 (252)
T 3h7a_A 6 RNATVAVIGAGD--YIGAEIAKKFAAEGF--T--VFAGRRNGEKLAPLV 48 (252)
T ss_dssp CSCEEEEECCSS--HHHHHHHHHHHHTTC--E--EEEEESSGGGGHHHH
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHH
Confidence 457889999887 456677777777674 2 333345554444333
No 139
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.19 E-value=37 Score=25.82 Aligned_cols=64 Identities=6% Similarity=-0.064 Sum_probs=41.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------CCchHHHHHHHHHhh----CCCeEE
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------QNRKGALSYALSAKE----RGIKII 171 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH---------------RtPe~l~ey~k~ae~----~GikVI 171 (185)
|+.++++|+|..+ -+...+++.|-+-|. ++.+++-. ..++.+.++++...+ .+++++
T Consensus 1 m~~k~vlITGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 1 MSSGKVIVYGGKG--ALGSAILEFFKKNGY--TVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp -CCEEEEEETTTS--HHHHHHHHHHHHTTE--EEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 3457899999987 567788888888773 44443311 123445555554432 468999
Q ss_pred EEecCcc
Q 029926 172 IVGDGVE 178 (185)
Q Consensus 172 IAvAG~A 178 (185)
|-.||..
T Consensus 77 v~~Ag~~ 83 (236)
T 1ooe_A 77 FCVAGGW 83 (236)
T ss_dssp EECCCCC
T ss_pred EECCccc
Confidence 9999964
No 140
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=67.96 E-value=14 Score=28.04 Aligned_cols=40 Identities=13% Similarity=0.084 Sum_probs=33.3
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ 151 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHR 151 (185)
.|+++|+|+..-..+..-+-...++|++-| |++.++|.+.
T Consensus 3 ~m~kkv~ill~~g~~~~e~~~~~~~l~~ag--~~v~~~s~~~ 42 (190)
T 4e08_A 3 HMSKSALVILAPGAEEMEFIIAADVLRRAG--IKVTVAGLNG 42 (190)
T ss_dssp -CCCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCCcEEEEEECCCchHHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 466789999998888777778889999887 6999999987
No 141
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=67.67 E-value=13 Score=26.80 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029926 128 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 181 (185)
Q Consensus 128 mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhL 181 (185)
.+++.+.++..|++++..+..- .| ...+++.+++.+++.||.++-+...+
T Consensus 89 l~~~~~~~~~~g~~~~~~v~~G--~~--~~~I~~~a~~~~~DLIVmG~~g~~~~ 138 (175)
T 2gm3_A 89 LEFFVNKCHEIGVGCEAWIKTG--DP--KDVICQEVKRVRPDFLVVGSRGLGRF 138 (175)
T ss_dssp HHHHHHHHHHHTCEEEEEEEES--CH--HHHHHHHHHHHCCSEEEEEECCCC--
T ss_pred HHHHHHHHHHCCCceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCChh
Confidence 4444555666788888777642 23 45566666677788888776544433
No 142
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=67.51 E-value=24 Score=27.61 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=18.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+- +...+++.|-+-|.
T Consensus 9 l~~k~vlVTGas~g--IG~aia~~l~~~G~ 36 (264)
T 3ucx_A 9 LTDKVVVISGVGPA--LGTTLARRCAEQGA 36 (264)
T ss_dssp TTTCEEEEESCCTT--HHHHHHHHHHHTTC
T ss_pred cCCcEEEEECCCcH--HHHHHHHHHHHCcC
Confidence 34578888888875 44555566655553
No 143
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=67.25 E-value=22 Score=28.30 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=25.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+++++++|+|..+ -+...+++.|-+-|.. |+-..|+++.+++..
T Consensus 22 ~~~k~~lVTGas~--GIG~aia~~la~~G~~----V~~~~r~~~~~~~~~ 65 (279)
T 3sju_A 22 SRPQTAFVTGVSS--GIGLAVARTLAARGIA----VYGCARDAKNVSAAV 65 (279)
T ss_dssp ---CEEEEESTTS--HHHHHHHHHHHHTTCE----EEEEESCHHHHHHHH
T ss_pred cCCCEEEEeCCCC--HHHHHHHHHHHHCCCE----EEEEeCCHHHHHHHH
Confidence 3467999999987 4566667777666642 233345555544443
No 144
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=67.20 E-value=21 Score=30.58 Aligned_cols=63 Identities=14% Similarity=0.080 Sum_probs=47.6
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCCC---------C-chHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 114 IVGIIMESDS----DLPVMNDAARTLSDFGVPYEIKILSPHQ---------N-RKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~S----Dl~vmekA~~vLeefGIpyEvrVaSAHR---------t-Pe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+|+||.=|.. |.+..+.+.+.|+++|....+ +.|- + -+++.++.+...+..++.|+++-|+-+
T Consensus 15 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~---~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 91 (336)
T 3sr3_A 15 TIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE---GSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMN 91 (336)
T ss_dssp EEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE---CTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE---cccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 6999987653 567899999999999986443 3332 1 246777777777888999999999854
No 145
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=67.01 E-value=18 Score=32.84 Aligned_cols=90 Identities=16% Similarity=0.089 Sum_probs=61.7
Q ss_pred chhhhhhhhhhhcCCCceeeeccC--CC-----------------CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCe
Q 029926 82 SATSTRKDYSSVREPSTVFEEENA--NG-----------------DSTDTPIVGIIMESDSDLPVMNDAARTLSDFGVPY 142 (185)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~ea~--~~-----------------~~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpy 142 (185)
+...+|...+.+..|++.+..-.+ ++ .......+.-|..+.||...++.+.+.+++.|...
T Consensus 64 ~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v 143 (464)
T 2nx9_A 64 EDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHA 143 (464)
T ss_dssp CCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEE
Confidence 444677777777677665542211 00 00112235556788999999999999999999987
Q ss_pred eEEEE--cCCC-CchHHHHHHHHHhhCCCeEE
Q 029926 143 EIKIL--SPHQ-NRKGALSYALSAKERGIKII 171 (185)
Q Consensus 143 EvrVa--SAHR-tPe~l~ey~k~ae~~GikVI 171 (185)
+..+. ...| +|+.+.++++.+.+-|++.|
T Consensus 144 ~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I 175 (464)
T 2nx9_A 144 QGTLCYTTSPVHNLQTWVDVAQQLAELGVDSI 175 (464)
T ss_dssp EEEEECCCCTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEE
Confidence 76662 2333 78999999999999999754
No 146
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=67.01 E-value=33 Score=27.15 Aligned_cols=61 Identities=16% Similarity=0.255 Sum_probs=42.4
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHh-CCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDF-GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeef-GIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
..|++++.. +|- ...+.+.+.+++. |+ ++.+...+..++...++++....++++-+|....
T Consensus 7 ~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~--~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 71 (325)
T 2x7x_A 7 FRIGVAQCS-DDSWRHKMNDEILREAMFYNGV--SVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISAN 71 (325)
T ss_dssp CEEEEEESC-CSHHHHHHHHHHHHHHTTSSSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEEecC-CCHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 468888877 442 3445566667776 65 5666777778888778887777778887776543
No 147
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=66.84 E-value=24 Score=27.95 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=43.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-----------------------CchHHHHHHHHHhh--
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ-----------------------NRKGALSYALSAKE-- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHR-----------------------tPe~l~ey~k~ae~-- 165 (185)
++.++++|+|..+.--+...+++.|-+-|. .+.+++-.. .++.+.++++...+
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 346899999987665567777777777775 344443222 34455555554433
Q ss_pred CCCeEEEEecCccC
Q 029926 166 RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 ~GikVIIAvAG~AA 179 (185)
..++++|-.||...
T Consensus 102 g~id~li~nAg~~~ 115 (280)
T 3nrc_A 102 DGLDAIVHSIAFAP 115 (280)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 35799999998754
No 148
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=66.81 E-value=18 Score=27.07 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=38.6
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCC-eEEE
Q 029926 114 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 172 (185)
Q Consensus 114 kVaIIMGS~---SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~Gi-kVII 172 (185)
+|.|.+-|. ..=+.+++|...|+++||+|+..=+.. .|+...++.+......+ .|||
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~--d~~~~~~L~~~~G~~tvP~VfI 96 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ--NPDIRAELPKYANWPTFPQLWV 96 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC--CHHHHHHHHHHHCCCCcCEEEE
Confidence 477776543 345789999999999999997766654 46666666554433444 5555
No 149
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=66.45 E-value=29 Score=23.98 Aligned_cols=56 Identities=21% Similarity=0.236 Sum_probs=36.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH-hhCCC-eEEE
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGI-KIII 172 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a-e~~Gi-kVII 172 (185)
..|.|... +.=+.+++|...|+++||+|+..=+.. .|+...++.+.. ....+ .|||
T Consensus 16 ~~v~vy~~--~~Cp~C~~ak~~L~~~~i~y~~idI~~--~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 16 AKIEIYTW--STCPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCEEEEEC--TTCHHHHHHHHHHHHHTCCCEEEECTT--CHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CCEEEEEc--CCChhHHHHHHHHHHCCCCCEEEEcCC--CHHHHHHHHHHhCCCCCCCEEEE
Confidence 34666554 455999999999999999998766654 455555555443 33334 4443
No 150
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=66.35 E-value=26 Score=27.29 Aligned_cols=28 Identities=21% Similarity=0.114 Sum_probs=18.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 4 l~~k~vlVTGas~--gIG~aia~~l~~~G~ 31 (257)
T 3imf_A 4 MKEKVVIITGGSS--GMGKGMATRFAKEGA 31 (257)
T ss_dssp TTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 4457888888876 455666666666664
No 151
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=65.98 E-value=29 Score=27.15 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=42.3
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEc-CCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 113 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 113 ~kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVaS-AHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
.+|+++....++ ....+.+.+.++++|+ ++.+.. .+..++...++++.+..++++.||.....
T Consensus 2 ~~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 67 (313)
T 2h3h_A 2 LTIGVIGKSVHPYWSQVEQGVKAAGKALGV--DTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSD 67 (313)
T ss_dssp CEEEEECSCSSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred eEEEEEeCCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 357888765554 2345566777888885 455543 36678887788877777888888876543
No 152
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=65.96 E-value=36 Score=25.96 Aligned_cols=65 Identities=5% Similarity=0.038 Sum_probs=48.1
Q ss_pred CCeEEEEeccC-CC---HHHHHHHHHHHHHh-CCCeeEEEE-cCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESD-SD---LPVMNDAARTLSDF-GVPYEIKIL-SPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~-SD---l~vmekA~~vLeef-GIpyEvrVa-SAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
..+|++++.+. +| ..+.+.+.+.+++. |....+... ..+-.++...++++.+.+++++-||....
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 8 KYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp CEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred cceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 34699888775 33 34566777888888 777776665 35778888888888888888988887654
No 153
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=65.85 E-value=32 Score=25.30 Aligned_cols=56 Identities=20% Similarity=0.105 Sum_probs=46.2
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe---------------eEEEEcCCCCchHHHHHHHHHhhCCCeEE
Q 029926 116 GIIMESDSDLPVMNDAARTLSDFGVPY---------------EIKILSPHQNRKGALSYALSAKERGIKII 171 (185)
Q Consensus 116 aIIMGS~SDl~vmekA~~vLeefGIpy---------------EvrVaSAHRtPe~l~ey~k~ae~~GikVI 171 (185)
.++.|.-+-...++.....|..+|.+. -+-++|......++.+.++.++++|++++
T Consensus 43 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi 113 (180)
T 1jeo_A 43 IFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNII 113 (180)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEE
T ss_pred EEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEE
Confidence 456777777889999999999999864 25678888888899999999999999875
No 154
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=65.42 E-value=15 Score=30.31 Aligned_cols=60 Identities=17% Similarity=0.115 Sum_probs=41.8
Q ss_pred CeEEEEe----ccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIM----ESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIM----GS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.++.||. |+..-....+++...|++.|+++++.. -..+....++++++.+ +++++|++-|
T Consensus 9 ~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~---t~~~~~a~~~~~~~~~-~~d~vv~~GG 72 (304)
T 3s40_A 9 EKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILH---TKEQGDATKYCQEFAS-KVDLIIVFGG 72 (304)
T ss_dssp SSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEE---CCSTTHHHHHHHHHTT-TCSEEEEEEC
T ss_pred CEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEE---ccCcchHHHHHHHhhc-CCCEEEEEcc
Confidence 3566665 333224677889999999999887764 3456777788877654 7888777655
No 155
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=65.30 E-value=45 Score=25.67 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=42.2
Q ss_pred CCeEEEEeccCC-----CHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC-CCeEEEEecCccC
Q 029926 112 TPIVGIIMESDS-----DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEA 179 (185)
Q Consensus 112 ~~kVaIIMGS~S-----Dl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~-GikVIIAvAG~AA 179 (185)
.++|+||+=|+. |-. ..-....|+++|+......+ .--.++.+.+-++++.++ +++++|.-.|.+.
T Consensus 10 ~~~v~Ii~tGdE~g~i~D~n-~~~l~~~L~~~G~~v~~~~i-v~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 10 PTRIAILTVSNRRGEEDDTS-GHYLRDSAQEAGHHVVDKAI-VKENRYAIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp CCEEEEEEECSSCCGGGCHH-HHHHHHHHHHTTCEEEEEEE-ECSCHHHHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred CCEEEEEEEeCCCCcccCcc-HHHHHHHHHHCCCeEeEEEE-eCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 357888874332 332 23467788999986533222 234567777777766665 6899998888753
No 156
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=65.06 E-value=35 Score=27.27 Aligned_cols=66 Identities=11% Similarity=0.026 Sum_probs=47.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--cCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL--SPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVa--SAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
..+|++|.|..... -.+.-.+.+++.|.+ ++.+. +..-.|+.-.+.++..-++|+++|++.++..|
T Consensus 126 ~~~Ig~i~g~~~~~-r~~Gf~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~D~~a 193 (296)
T 2hqb_A 126 THKVGVIAAFPWQP-EVEGFVDGAKYMNES-EAFVRYVGEWTDADKALELFQELQKEQVDVFYPAGDGYH 193 (296)
T ss_dssp SSEEEEEESCTTCH-HHHHHHHHHHHTTCC-EEEEEECSSSSCHHHHHHHHHHHHTTTCCEEECCCTTTH
T ss_pred CCeEEEEcCcCchh-hHHHHHHHHHHhCCC-eEEEEeeccccCHHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 46899999976554 556667888899987 66543 23346777767766665668999999988743
No 157
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=64.92 E-value=30 Score=23.60 Aligned_cols=50 Identities=14% Similarity=0.184 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029926 127 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 182 (185)
Q Consensus 127 vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLP 182 (185)
..+++.+.+++.|++++..+..- .| .+.+.+.++ +++.+|.++-..+.+.
T Consensus 67 ~l~~~~~~~~~~g~~~~~~v~~g--~~--~~~I~~~a~--~~dliV~G~~~~~~~~ 116 (138)
T 3idf_A 67 LTQKFSTFFTEKGINPFVVIKEG--EP--VEMVLEEAK--DYNLLIIGSSENSFLN 116 (138)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEES--CH--HHHHHHHHT--TCSEEEEECCTTSTTS
T ss_pred HHHHHHHHHHHCCCCeEEEEecC--Ch--HHHHHHHHh--cCCEEEEeCCCcchHH
Confidence 34555666677899988887654 23 345555555 6888888876544443
No 158
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=64.74 E-value=23 Score=28.21 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=19.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 26 l~~k~~lVTGas~--GIG~aia~~la~~G~ 53 (270)
T 3ftp_A 26 LDKQVAIVTGASR--GIGRAIALELARRGA 53 (270)
T ss_dssp TTTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 4567999999887 455666666666664
No 159
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=64.59 E-value=5.5 Score=31.72 Aligned_cols=55 Identities=9% Similarity=0.149 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHh-hCCCeEEEEecCccCcCcCC
Q 029926 128 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVGDGVEAHLSGT 184 (185)
Q Consensus 128 mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae-~~GikVIIAvAG~AAhLPGV 184 (185)
.+++.+.+.+-|| ++.|.|.+|++++=.++..... ..|..+.-|-.|.|.|-.|.
T Consensus 41 l~~m~~~a~~~Gi--~l~i~sgyRs~~~Q~~Ly~~~~~~~g~~~~~a~pg~S~H~~G~ 96 (179)
T 2vo9_A 41 TRNVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHCCC--eEEEEEEECCHHHHHHHHHHhcccCCCceecCCCCCCCCCCcc
Confidence 3445555566677 5899999999999999875443 34555656677888888774
No 160
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=64.56 E-value=42 Score=25.63 Aligned_cols=43 Identities=23% Similarity=0.224 Sum_probs=24.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+.++++|+|..+ -+...+++.|-+-|. ++. -..|+++.+.+..
T Consensus 8 ~~k~vlITGas~--giG~~~a~~l~~~G~--~V~--~~~r~~~~~~~~~ 50 (253)
T 3qiv_A 8 ENKVGIVTGSGG--GIGQAYAEALAREGA--AVV--VADINAEAAEAVA 50 (253)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEE--EEESCHHHHHHHH
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCC--EEE--EEcCCHHHHHHHH
Confidence 456888888876 445666666666664 222 2334554444433
No 161
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=64.54 E-value=0.7 Score=39.59 Aligned_cols=64 Identities=8% Similarity=0.041 Sum_probs=42.3
Q ss_pred CeEEEEeccCCCHHH-HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPV-MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~v-mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+|.||++....... .++..+.|++-| +++.+.+-+-+.+.+.+..+.+++ +.++|||+-|++.
T Consensus 42 ~~~liVtd~~~~~~~~~~~v~~~L~~~g--~~~~~~~ge~~~~~v~~~~~~~~~-~~d~IIavGGGsv 106 (376)
T 1kq3_A 42 ERAFVVIDDFVDKNVLGENFFSSFTKVR--VNKQIFGGECSDEEIERLSGLVEE-ETDVVVGIGGGKT 106 (376)
T ss_dssp SEEEEEECHHHHHHTTCTTGGGGCSSSE--EEEEECCSSCBHHHHHHHHTTCCT-TCCEEEEEESHHH
T ss_pred CeEEEEECccHHhhccHHHHHHHHHHcC--CeEEEeCCCCCHHHHHHHHHHHhc-CCCEEEEeCCcHH
Confidence 479999876432222 445555565556 345555555555577777777777 8999999999863
No 162
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=64.24 E-value=26 Score=27.47 Aligned_cols=58 Identities=17% Similarity=0.148 Sum_probs=36.5
Q ss_pred eEEEEeccCCC----HHHHHHHHHHHHHh-CCCeeEEEEcCCCC--------------------c--hHHHHHHHHHhhC
Q 029926 114 IVGIIMESDSD----LPVMNDAARTLSDF-GVPYEIKILSPHQN--------------------R--KGALSYALSAKER 166 (185)
Q Consensus 114 kVaIIMGS~SD----l~vmekA~~vLeef-GIpyEvrVaSAHRt--------------------P--e~l~ey~k~ae~~ 166 (185)
+|.||.||... ...++.+.+.|++- |++ +.++..... + +.+.++.+...+
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~--v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~- 79 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVD--ISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLE- 79 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCE--EEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHH-
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCe--EEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHH-
Confidence 79999999753 55667777777776 765 455544322 2 556666666555
Q ss_pred CCeEEEEec
Q 029926 167 GIKIIIVGD 175 (185)
Q Consensus 167 GikVIIAvA 175 (185)
+++||-++
T Consensus 80 -AD~iI~~s 87 (242)
T 1sqs_A 80 -SDIIIISS 87 (242)
T ss_dssp -CSEEEEEE
T ss_pred -CCEEEEEc
Confidence 55555544
No 163
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=63.91 E-value=29 Score=25.25 Aligned_cols=50 Identities=16% Similarity=0.184 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhCCC-eeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 126 PVMNDAARTLSDFGVP-YEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 126 ~vmekA~~vLeefGIp-yEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
..++++.+.+++.|++ ++..+..- .| ..++++.+++.+++.||.++-...
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G--~~--~~~I~~~a~~~~~DLIV~G~~g~~ 131 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVG--AP--VDALVNLADEEKADLLVVGNVGLS 131 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECS--SH--HHHHHHHHHHTTCSEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecC--CH--HHHHHHHHHhcCCCEEEECCCCCC
Confidence 4566777777788998 87777642 33 456667777788888888765433
No 164
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=63.79 E-value=33 Score=27.37 Aligned_cols=25 Identities=24% Similarity=0.195 Sum_probs=14.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
.++++|+|..+ -+...+++.|-+-|
T Consensus 4 ~k~~lVTGas~--GIG~aia~~la~~G 28 (264)
T 3tfo_A 4 DKVILITGASG--GIGEGIARELGVAG 28 (264)
T ss_dssp TCEEEESSTTS--HHHHHHHHHHHHTT
T ss_pred CCEEEEeCCcc--HHHHHHHHHHHHCC
Confidence 45777777765 33445555555555
No 165
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=63.65 E-value=4.5 Score=32.85 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=43.2
Q ss_pred eeeeeccccchhhhhhhhhhhcCCCceeeec--cCCCCCCCCCeE---------EEEeccCCCHHH---HHHHHHHHHHh
Q 029926 73 IPVLASSNGSATSTRKDYSSVREPSTVFEEE--NANGDSTDTPIV---------GIIMESDSDLPV---MNDAARTLSDF 138 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kV---------aIIMGS~SDl~v---mekA~~vLeef 138 (185)
-||+||.+-.+ +=+++.+....++++|+|| ++..--..+|++ .|++|+.|-.+. .++...+|++|
T Consensus 107 ~NIVas~~l~~-~i~L~~la~~~~~~eYePe~fPgliyR~~~Pk~t~lIF~SGKiviTGaks~~~~~~A~~~i~~~L~~~ 185 (188)
T 2z8u_A 107 QNMVATADLGI-EPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEV 185 (188)
T ss_dssp EEEEEEEECSS-CCCHHHHHHHSTTEEECTTTSSSEEEEEETTEEEEEECTTSEEEEESCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCC-ccCHHHHHhhCcCcEECCccCceEEEEeCCCcEEEEEeCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 48889877666 6788888888899999988 332210011222 367898874433 45556677777
Q ss_pred CC
Q 029926 139 GV 140 (185)
Q Consensus 139 GI 140 (185)
|.
T Consensus 186 ~~ 187 (188)
T 2z8u_A 186 QE 187 (188)
T ss_dssp C-
T ss_pred cc
Confidence 63
No 166
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=63.63 E-value=3.8 Score=33.58 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=45.3
Q ss_pred eeeeeccccchhhhhhhhhhhcCCCceeeec--cCCCCCCCCCeE---------EEEeccCCCHH---HHHHHHHHHHHh
Q 029926 73 IPVLASSNGSATSTRKDYSSVREPSTVFEEE--NANGDSTDTPIV---------GIIMESDSDLP---VMNDAARTLSDF 138 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~e--a~~~~~~~~~kV---------aIIMGS~SDl~---vmekA~~vLeef 138 (185)
-||+||.+-.+ +=+++.+....++++|++| ++..-...+|++ .|++|+.|-.+ .+++....|+++
T Consensus 107 ~NIVas~~l~~-~i~L~~la~~~~~~~YePe~fPgliyR~~~Pk~t~lIF~SGKiviTGaks~~~~~~A~~~i~~~L~~~ 185 (198)
T 1mp9_A 107 QNIVASANLHV-IVNLDKAAFLLENNMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVEL 185 (198)
T ss_dssp EEEEEEEECSS-EECHHHHHHHSSSEECCTTTCSSEEEEETTTTEEEEECTTSEEEEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeeCCC-ccCHHHHHhhcCCcEECCccCCeEEEEeCCCcEEEEEeCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 58899977666 6788888888899999988 332200011221 35788877333 256667788999
Q ss_pred CCC
Q 029926 139 GVP 141 (185)
Q Consensus 139 GIp 141 (185)
|..
T Consensus 186 ~~~ 188 (198)
T 1mp9_A 186 DCV 188 (198)
T ss_dssp TCE
T ss_pred CCC
Confidence 864
No 167
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=63.53 E-value=32 Score=29.21 Aligned_cols=65 Identities=15% Similarity=0.071 Sum_probs=47.3
Q ss_pred eEEEEeccC----CCHHHHHHHHHHHHHhCCCeeEEEEc-CCC-------Cc-hHHHHHHHHHhhCCCeEEEEecCccCc
Q 029926 114 IVGIIMESD----SDLPVMNDAARTLSDFGVPYEIKILS-PHQ-------NR-KGALSYALSAKERGIKIIIVGDGVEAH 180 (185)
Q Consensus 114 kVaIIMGS~----SDl~vmekA~~vLeefGIpyEvrVaS-AHR-------tP-e~l~ey~k~ae~~GikVIIAvAG~AAh 180 (185)
+|+||.=|. .+-+..+.+.+.|+++|... .+.. +.+ ++ +++.++.+...+..++.|+++-|+-+.
T Consensus 14 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v--~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (327)
T 4h1h_A 14 EIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKV--TFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNS 91 (327)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEE--EECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred EEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEE--EECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchhH
Confidence 699997653 36678999999999999754 3321 212 22 477778877788889999999988543
No 168
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=63.40 E-value=24 Score=27.49 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=45.1
Q ss_pred CCeEEEEec-----cCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 112 TPIVGIIME-----SDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMG-----S~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
...|++++. ..+| ..+.+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 7 s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~ 76 (295)
T 3hcw_A 7 TYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGY--GTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLY 76 (295)
T ss_dssp SCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTC--EEEECCCCSHHHHHHHHHHHHHTTCCSEEEESC
T ss_pred CcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCC--EEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcC
Confidence 346999983 2333 4567778888888885 566777777777778888888888888777654
No 169
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=63.03 E-value=32 Score=26.69 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=16.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
++.++++|+|..+ -+...+++.|-+-|
T Consensus 3 l~~k~vlVTGas~--gIG~~ia~~l~~~G 29 (260)
T 2qq5_A 3 MNGQVCVVTGASR--GIGRGIALQLCKAG 29 (260)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCC
Confidence 3446777777766 34555555555555
No 170
>1rm1_A Tata-box binding protein; yeast TFIIA, TBP protein, ATA-box DNA, transcription/DNA complex; 2.50A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1
Probab=62.29 E-value=4.2 Score=34.45 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=54.3
Q ss_pred eeeeeccccchhhhhhhhhhhcCCCceeeec--cCCC----CCC------CCCeEEEEeccCC--CHHH-HHHHHHHHHH
Q 029926 73 IPVLASSNGSATSTRKDYSSVREPSTVFEEE--NANG----DST------DTPIVGIIMESDS--DLPV-MNDAARTLSD 137 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~e--a~~~----~~~------~~~kVaIIMGS~S--Dl~v-mekA~~vLee 137 (185)
-||+||.+-.| +=+++.+....++++|++| ++-. .+. ..++ .|++|..| |... +++....|++
T Consensus 68 ~NIVas~~l~~-~ldL~~ia~~~~n~eYePe~Fpgli~Rl~~Pk~t~lIF~SGK-iV~TGaks~e~a~~A~~~i~~~L~~ 145 (240)
T 1rm1_A 68 QNIVATVTLGC-RLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK-MVVTGAKSEDDSKLASRKYARIIQK 145 (240)
T ss_dssp EEEEEEEECCS-CCCHHHHHHHBTTEEECTTTCSEEEEEEETTEEEEEEETTSE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCC-ccCHHHHHhhCCCcEEcCcccceEEEEeCCCcEEEEEECCCe-EEEEecCCHHHHHHHHHHHHHHHHH
Confidence 58888887777 6778888888888999988 3322 111 0122 35678555 3333 4677888999
Q ss_pred hCCCe---eEEE----EcCC-CCchHHHHHHH
Q 029926 138 FGVPY---EIKI----LSPH-QNRKGALSYAL 161 (185)
Q Consensus 138 fGIpy---EvrV----aSAH-RtPe~l~ey~k 161 (185)
+|++. +++| +|+- ..|=.++.++.
T Consensus 146 lg~~~~~~~f~IqNIVas~dl~f~I~Le~la~ 177 (240)
T 1rm1_A 146 IGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAF 177 (240)
T ss_dssp HTCCCCCEEEEEEEEEEEEECSSCBCHHHHHH
T ss_pred cCCCcccCcceEEEEEEEEeCCCccCHHHHHH
Confidence 99862 4443 4422 44556666664
No 171
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=61.64 E-value=19 Score=27.83 Aligned_cols=42 Identities=14% Similarity=0.155 Sum_probs=29.8
Q ss_pred CCCCeEEEEecc----------CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc
Q 029926 110 TDTPIVGIIMES----------DSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 153 (185)
Q Consensus 110 ~~~~kVaIIMGS----------~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP 153 (185)
+|+++|+|+..| ..++.-+-...++|++-| |++.++|.+..|
T Consensus 3 ~m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag--~~v~~vs~~~~~ 54 (224)
T 1u9c_A 3 AMSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG--YDVKVASIQGGE 54 (224)
T ss_dssp -CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT--CEEEEEESSCBC
T ss_pred CCCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC--CeEEEECCCCCc
Confidence 465689999984 334445556777787766 799999988754
No 172
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=61.64 E-value=38 Score=25.66 Aligned_cols=65 Identities=17% Similarity=0.103 Sum_probs=39.8
Q ss_pred CCeEEEEeccCC------------CHHHHHHHHHHHHHhCCCe-eEEEEcCCCCchHHHHHHHHH-hhCCCeEEEEecCc
Q 029926 112 TPIVGIIMESDS------------DLPVMNDAARTLSDFGVPY-EIKILSPHQNRKGALSYALSA-KERGIKIIIVGDGV 177 (185)
Q Consensus 112 ~~kVaIIMGS~S------------Dl~vmekA~~vLeefGIpy-EvrVaSAHRtPe~l~ey~k~a-e~~GikVIIAvAG~ 177 (185)
..+|+||+=|++ |-. ..-..+.|+++|++. +..++ -=.++.+.+-+..+ +.+.++++|.-.|.
T Consensus 15 ~~~v~iitvsd~~~~~~~~~g~i~D~n-g~~L~~~L~~~G~~v~~~~iV--~Dd~~~i~~al~~~~a~~~~DlVittGG~ 91 (178)
T 3iwt_A 15 SLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCEEEEEEEcCCCccccccCCCCCcch-HHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEecCCc
Confidence 457999987763 321 234678899999875 33333 23344444444333 34568999998887
Q ss_pred cC
Q 029926 178 EA 179 (185)
Q Consensus 178 AA 179 (185)
+-
T Consensus 92 g~ 93 (178)
T 3iwt_A 92 GY 93 (178)
T ss_dssp SS
T ss_pred cc
Confidence 63
No 173
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=61.51 E-value=41 Score=26.15 Aligned_cols=27 Identities=15% Similarity=0.135 Sum_probs=17.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (262)
T 1zem_A 6 NGKVCLVTGAGG--NIGLATALRLAEEGT 32 (262)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 446788888776 345566666666663
No 174
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=61.40 E-value=52 Score=25.43 Aligned_cols=26 Identities=27% Similarity=0.307 Sum_probs=15.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
+.++++|+|..+ -+...+++.|-+-|
T Consensus 6 ~~k~~lVTGas~--gIG~aia~~l~~~G 31 (247)
T 2jah_A 6 QGKVALITGASS--GIGEATARALAAEG 31 (247)
T ss_dssp TTCEEEEESCSS--HHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCC
Confidence 446788888776 34455555555555
No 175
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=61.26 E-value=40 Score=25.23 Aligned_cols=61 Identities=8% Similarity=-0.074 Sum_probs=34.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHH-HHHhCCCeeEEEEcCCCC------------chHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDLPVMNDAART-LSDFGVPYEIKILSPHQN------------RKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~v-LeefGIpyEvrVaSAHRt------------Pe~l~ey~k~ae~~GikVIIAvA 175 (185)
++|.||.||...-..-++.++. ++.+.-..++.++..... |+.+.++.+...+ ++.||-+.
T Consensus 7 Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~--aD~ii~~s 80 (193)
T 1rtt_A 7 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRA--ADALLFAT 80 (193)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHH--CSEEEEEC
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHh--CCEEEEEc
Confidence 4799999997522333343333 334432246666665543 3566666666555 55555543
No 176
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=61.01 E-value=18 Score=28.87 Aligned_cols=48 Identities=10% Similarity=0.102 Sum_probs=32.2
Q ss_pred CeEEEE---eccCCCHHHHHHHHHHHHHhCCCeeEEEEc-CCCCchHHHHHHHH
Q 029926 113 PIVGII---MESDSDLPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALS 162 (185)
Q Consensus 113 ~kVaII---MGS~SDl~vmekA~~vLeefGIpyEvrVaS-AHRtPe~l~ey~k~ 162 (185)
++|++| +|..+.-+..+...+.|+++|++ +.++. .+++|++..+.+++
T Consensus 28 ~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~ 79 (206)
T 3l4e_A 28 KTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRK 79 (206)
T ss_dssp CEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHh
Confidence 578888 33334456889999999999984 55543 22567666666653
No 177
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=60.85 E-value=45 Score=25.37 Aligned_cols=28 Identities=14% Similarity=0.293 Sum_probs=17.0
Q ss_pred CCchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 151 QNRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 151 RtPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
..++.+.++++...+ ..++++|-.||..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 64 SDIESIQNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 345555555554433 2478888888864
No 178
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=60.55 E-value=7.1 Score=32.02 Aligned_cols=55 Identities=9% Similarity=0.138 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh-CCCeEEEEecCccCcCcCC
Q 029926 128 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDGVEAHLSGT 184 (185)
Q Consensus 128 mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~-~GikVIIAvAG~AAhLPGV 184 (185)
+++..+.+++-||+ +.|+|..|++++=.++...... .|..|.-|-.|.|.|..|.
T Consensus 41 l~~m~~aA~~~Gi~--l~v~sGyRS~e~Q~~Ly~~g~s~~G~~vt~A~pg~S~H~~G~ 96 (179)
T 1xp2_A 41 TRNVIKKMAKEGIY--LCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHTTTCC--EEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHcCCe--EEEEEeecCHHHHHHHHHhhcccCCceeeeCCCCCCCcccee
Confidence 45555666777875 8999999999999988765432 3444444556889998763
No 179
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=60.51 E-value=60 Score=26.39 Aligned_cols=36 Identities=17% Similarity=0.057 Sum_probs=25.3
Q ss_pred CeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEc
Q 029926 113 PIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILS 148 (185)
Q Consensus 113 ~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVaS 148 (185)
++|.||.||... ...++.+.+.|++-|.++++.-+.
T Consensus 3 mkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 3 RRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 379999999864 456777777888877655444443
No 180
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=60.51 E-value=21 Score=28.35 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=40.3
Q ss_pred CCeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 112 TPIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~--vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
-.+|+||.+..+|+. ..+...+.|++.|++..... ...........++...+.+.++|++.
T Consensus 149 ~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~--~~~~~~d~~~~~~~l~~~~~d~v~~~ 211 (366)
T 3td9_A 149 AKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVF--FRSGDQDFSAQLSVAMSFNPDAIYIT 211 (366)
T ss_dssp CCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEE--ECTTCCCCHHHHHHHHHTCCSEEEEC
T ss_pred CcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEE--eCCCCccHHHHHHHHHhcCCCEEEEc
Confidence 357999987655543 45667788899999765444 22334445555666666778888874
No 181
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=59.86 E-value=25 Score=27.82 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=22.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.||+||+|..|..-+...+++.|-+-|-
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga 33 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA 33 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC
Confidence 46799999977766677777777777775
No 182
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=59.42 E-value=34 Score=24.06 Aligned_cols=50 Identities=12% Similarity=0.040 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCC-CeeEEEEcCCCCchHHHHHHHH-HhhCCCeEEEEecCccCc
Q 029926 128 MNDAARTLSDFGV-PYEIKILSPHQNRKGALSYALS-AKERGIKIIIVGDGVEAH 180 (185)
Q Consensus 128 mekA~~vLeefGI-pyEvrVaSAHRtPe~l~ey~k~-ae~~GikVIIAvAG~AAh 180 (185)
++++.+.+++.|+ +++..+..... -..++++. +++.+++.||.++-+-..
T Consensus 81 l~~~~~~~~~~g~~~~~~~v~~~g~---~~~~I~~~~a~~~~~DlIV~G~~g~~~ 132 (156)
T 3fg9_A 81 VAEYVQLAEQRGVNQVEPLVYEGGD---VDDVILEQVIPEFKPDLLVTGADTEFP 132 (156)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEECSC---HHHHHHHTHHHHHCCSEEEEETTCCCT
T ss_pred HHHHHHHHHHcCCCceEEEEEeCCC---HHHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 4445555677799 48888775232 23455565 567779999888754433
No 183
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=59.36 E-value=26 Score=32.58 Aligned_cols=90 Identities=14% Similarity=0.013 Sum_probs=62.0
Q ss_pred chhhhhhhhhhhcCCCceeeeccC--CC-----------------CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCe
Q 029926 82 SATSTRKDYSSVREPSTVFEEENA--NG-----------------DSTDTPIVGIIMESDSDLPVMNDAARTLSDFGVPY 142 (185)
Q Consensus 82 ~~~~~~~~~~~~~~p~~~~~~ea~--~~-----------------~~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpy 142 (185)
+...++...+.+..|++.+..-.+ ++ .......+.-|..+.||..-++.+.+.+++.|...
T Consensus 81 ~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v 160 (539)
T 1rqb_A 81 EDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHA 160 (539)
T ss_dssp CCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeE
Confidence 455777888877778766543211 00 00012235556789999999999999999999987
Q ss_pred eEEEE--cCCC-CchHHHHHHHHHhhCCCeEE
Q 029926 143 EIKIL--SPHQ-NRKGALSYALSAKERGIKII 171 (185)
Q Consensus 143 EvrVa--SAHR-tPe~l~ey~k~ae~~GikVI 171 (185)
+..+. ...| +|+.+.++++.+.+-|++.|
T Consensus 161 ~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I 192 (539)
T 1rqb_A 161 QGTICYTISPVHTVEGYVKLAGQLLDMGADSI 192 (539)
T ss_dssp EEEEECCCSTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 65662 1222 68999999999999899754
No 184
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=59.29 E-value=35 Score=27.74 Aligned_cols=66 Identities=11% Similarity=0.127 Sum_probs=46.4
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC---------------CCCchHHHHHHHHHhh--CCCeEEEEe
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP---------------HQNRKGALSYALSAKE--RGIKIIIVG 174 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA---------------HRtPe~l~ey~k~ae~--~GikVIIAv 174 (185)
+.||++|+|..| -+.+.+++.|-+-|-.. -+.+- -..++...++++...+ .+++++|--
T Consensus 10 ~GK~alVTGas~--GIG~aia~~la~~Ga~V--~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn 85 (261)
T 4h15_A 10 RGKRALITAGTK--GAGAATVSLFLELGAQV--LTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHM 85 (261)
T ss_dssp TTCEEEESCCSS--HHHHHHHHHHHHTTCEE--EEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred CCCEEEEeccCc--HHHHHHHHHHHHcCCEE--EEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 468999999998 56778889998988643 22221 1345667777766543 458999999
Q ss_pred cCccCcC
Q 029926 175 DGVEAHL 181 (185)
Q Consensus 175 AG~AAhL 181 (185)
||.....
T Consensus 86 AG~~~~~ 92 (261)
T 4h15_A 86 LGGSSAA 92 (261)
T ss_dssp CCCCCCC
T ss_pred CCCCccC
Confidence 9975443
No 185
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=59.15 E-value=46 Score=26.58 Aligned_cols=27 Identities=26% Similarity=0.273 Sum_probs=18.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
..++++|+|..+. +...+++.|-+-|.
T Consensus 27 ~~k~~lVTGas~G--IG~aia~~la~~G~ 53 (283)
T 3v8b_A 27 PSPVALITGAGSG--IGRATALALAADGV 53 (283)
T ss_dssp CCCEEEEESCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 3578999998874 45666666666664
No 186
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=59.02 E-value=38 Score=27.21 Aligned_cols=66 Identities=8% Similarity=0.102 Sum_probs=41.4
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCCchHHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS------------------------PHQNRKGALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS------------------------AHRtPe~l~ey~k~ae~-- 165 (185)
+.++++|+|..|..-+...+++.|-+-|.. +.++. =-..++.+.++++...+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 467999999987755666677777777743 22221 11234455555554433
Q ss_pred CCCeEEEEecCccC
Q 029926 166 RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 ~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 108 g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 108 GKLDFLVHAIGFSD 121 (293)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 36899999998753
No 187
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=58.96 E-value=30 Score=28.65 Aligned_cols=57 Identities=11% Similarity=0.024 Sum_probs=44.0
Q ss_pred eEEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEcC------CC-CchHHHHHHHHHhhCCCeEE
Q 029926 114 IVGIIMESDSDL--------------PVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKII 171 (185)
Q Consensus 114 kVaIIMGS~SDl--------------~vmekA~~vLeefGIpyEvrVaSA------HR-tPe~l~ey~k~ae~~GikVI 171 (185)
.|.| .++.||. +.+.++.+.+++.|++.++.+.-+ .| +|+.+.++++.+.+-|++.|
T Consensus 96 ~v~i-~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 96 EVVI-FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp EEEE-EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEE-EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3554 6688887 567788889999999888777633 23 68999999999999898754
No 188
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=58.89 E-value=30 Score=21.61 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEE
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKII 171 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVI 171 (185)
+.=+.++++...|++.||+|+..-+. ..|+...++.+.....++-++
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~~~~~~vP~l 55 (82)
T 1fov_A 9 ETCPYCHRAKALLSSKGVSFQELPID--GNAAKREEMIKRSGRTTVPQI 55 (82)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHHHSSCCSCEE
T ss_pred CCChhHHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHHHhCCCCcCEE
Confidence 34489999999999999998766554 456766777765555555444
No 189
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=58.46 E-value=33 Score=23.95 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=40.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH-HHHhhCCC-eEEE
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA-LSAKERGI-KIII 172 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~-k~ae~~Gi-kVII 172 (185)
+|.|.+- +.=|.++++...|+++|++|+..=+.-|..+..+.+.+ +......+ .|||
T Consensus 18 ~v~vy~~--~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi 76 (114)
T 3h8q_A 18 RVVIFSK--SYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV 76 (114)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEc--CCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE
Confidence 4666554 55699999999999999999888887776666665655 33223333 5555
No 190
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=58.42 E-value=69 Score=25.60 Aligned_cols=27 Identities=22% Similarity=0.098 Sum_probs=19.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...++..|-+-|.
T Consensus 27 ~gk~~lVTGas~--GIG~aia~~la~~G~ 53 (299)
T 3t7c_A 27 EGKVAFITGAAR--GQGRSHAITLAREGA 53 (299)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 468999999987 455666666666664
No 191
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=58.11 E-value=60 Score=25.09 Aligned_cols=28 Identities=7% Similarity=0.115 Sum_probs=18.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 7 l~~k~vlVTGas~--giG~~ia~~l~~~G~ 34 (260)
T 2ae2_A 7 LEGCTALVTGGSR--GIGYGIVEELASLGA 34 (260)
T ss_dssp CTTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 3456888888876 345556666666663
No 192
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=58.09 E-value=15 Score=28.73 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=28.4
Q ss_pred CCCeEEEEeccCCC-HH----HHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029926 111 DTPIVGIIMESDSD-LP----VMNDAARTLSDFGVPYEIKILSPHQN 152 (185)
Q Consensus 111 ~~~kVaIIMGS~SD-l~----vmekA~~vLeefGIpyEvrVaSAHRt 152 (185)
|+.+|+|+.|+.|. .+ ..+...+.|++.|+ ++.++.....
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~--~v~~~~~~~~ 45 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGI--DAYPVDPKEV 45 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTC--EEEEECTTTS
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCC--eEEEEecCch
Confidence 45689999999874 22 45778889999997 4556655533
No 193
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=58.03 E-value=74 Score=25.81 Aligned_cols=27 Identities=19% Similarity=0.094 Sum_probs=17.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+- +...++..|-+-|.
T Consensus 45 ~gk~~lVTGas~G--IG~aia~~la~~G~ 71 (317)
T 3oec_A 45 QGKVAFITGAARG--QGRTHAVRLAQDGA 71 (317)
T ss_dssp TTCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 4568888888763 45566666666664
No 194
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=57.99 E-value=58 Score=24.55 Aligned_cols=27 Identities=15% Similarity=0.151 Sum_probs=16.4
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 152 NRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 152 tPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
.++.+.++++...+ .+++++|-.||..
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 69 DMADVRRLTTHIVERYGHIDCLVNNAGVG 97 (244)
T ss_dssp SHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEcCCcC
Confidence 44555555544332 2578999888864
No 195
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=57.99 E-value=21 Score=28.11 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=38.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.+|+|+. ..+-.+ .+....+-||++.+.... .+++++++.++.+.++|++|+|+.
T Consensus 95 ~kIavvg-~~~~~~---~~~~~~~ll~~~i~~~~~---~~~~e~~~~i~~l~~~G~~vvVG~ 149 (196)
T 2q5c_A 95 NELALIA-YKHSIV---DKHEIEAMLGVKIKEFLF---SSEDEITTLISKVKTENIKIVVSG 149 (196)
T ss_dssp SEEEEEE-ESSCSS---CHHHHHHHHTCEEEEEEE---CSGGGHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEe-Ccchhh---HHHHHHHHhCCceEEEEe---CCHHHHHHHHHHHHHCCCeEEECC
Confidence 4788874 333333 344455567776555544 689999999999999999999985
No 196
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=57.98 E-value=57 Score=25.44 Aligned_cols=27 Identities=11% Similarity=0.067 Sum_probs=19.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 25 ~~k~vlITGas~--gIG~a~a~~l~~~G~ 51 (272)
T 4e3z_A 25 DTPVVLVTGGSR--GIGAAVCRLAARQGW 51 (272)
T ss_dssp CSCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 357899999887 456677777777775
No 197
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=57.91 E-value=25 Score=27.80 Aligned_cols=60 Identities=18% Similarity=0.153 Sum_probs=47.4
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpy----EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|-=.|-...++++ ..+++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 79 (154)
T 1rvv_A 13 LKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAE---TKKYDAIITLG 79 (154)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999888 77889999999999873 4567778777777666654 45689888753
No 198
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=57.40 E-value=26 Score=26.46 Aligned_cols=60 Identities=5% Similarity=-0.030 Sum_probs=34.9
Q ss_pred EEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 115 VGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 115 VaIIMGS~SDl---~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
|++++-+.+|- ...+.+.+.+++.|. ++.+....-.++...++++....++++.+|....
T Consensus 2 Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 64 (276)
T 2h0a_A 2 VSVLLPFVATEFYRRLVEGIEGVLLEQRY--DLALFPILSLARLKRYLENTTLAYLTDGLILASY 64 (276)
T ss_dssp EEEEECCSCCHHHHHHHHHHHHHHGGGTC--EEEECCCCSCCCCC---------CCCSEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecC
Confidence 67777655542 456677778888885 5666667667776667777776778887776543
No 199
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=57.38 E-value=37 Score=26.45 Aligned_cols=66 Identities=18% Similarity=0.034 Sum_probs=42.1
Q ss_pred CCeEEEEeccCC------------CHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC-CCeEEEEecCcc
Q 029926 112 TPIVGIIMESDS------------DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVE 178 (185)
Q Consensus 112 ~~kVaIIMGS~S------------Dl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~-GikVIIAvAG~A 178 (185)
.++|+||+=|+. |-. ..-....|+++|+......+ .-=.++.+.+.++++-++ +++++|.-.|.+
T Consensus 15 ~~rv~IittGde~~~~~~~~G~i~Dsn-~~~L~~~l~~~G~~v~~~~i-v~Dd~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 15 SLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSL-VPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEE-ECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CCEEEEEEeCcccccccccCCeEeehH-HHHHHHHHHHCCCEEEEEEE-eCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 468999976642 221 23456788999986533322 233566677666665544 689999888765
Q ss_pred C
Q 029926 179 A 179 (185)
Q Consensus 179 A 179 (185)
.
T Consensus 93 ~ 93 (178)
T 2pjk_A 93 Y 93 (178)
T ss_dssp S
T ss_pred C
Confidence 4
No 200
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.37 E-value=56 Score=25.54 Aligned_cols=43 Identities=5% Similarity=0.060 Sum_probs=25.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+.++++|+|..+ -+...+++.|-+-|. .+.+ ..|+++++++..
T Consensus 9 ~~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~ 51 (262)
T 3pk0_A 9 QGRSVVVTGGTK--GIGRGIATVFARAGA--NVAV--AGRSTADIDACV 51 (262)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHH
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHH
Confidence 457888998877 445666666666664 2222 335554444433
No 201
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=57.31 E-value=39 Score=28.88 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 127 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 127 vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
...-+..+.+++|++.-.++..-.|+.+.+.+.+..+.+.|++=|.|..|=
T Consensus 70 t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 70 THSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 344455666789999999999999999999999999999999888888874
No 202
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=57.30 E-value=40 Score=25.08 Aligned_cols=58 Identities=10% Similarity=0.030 Sum_probs=36.3
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCC-CeeEEEEcCCCCchHHHHHHHHHhhC-CCeEEEE
Q 029926 114 IVGIIMESDSDL---PVMNDAARTLSDFGV-PYEIKILSPHQNRKGALSYALSAKER-GIKIIIV 173 (185)
Q Consensus 114 kVaIIMGS~SDl---~vmekA~~vLeefGI-pyEvrVaSAHRtPe~l~ey~k~ae~~-GikVIIA 173 (185)
+|.|+|=|+-+. +.+.+|.++|++.|+ +|+..-+. ..|+....+.+....+ -..|||-
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~--~~~~~r~~l~~~sg~~TvPqIFI~ 83 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVL--DDPELRQGIKDYSNWPTIPQVYLN 83 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETT--SCHHHHHHHHHHHTCCSSCEEEET
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeeccc--CCHHHHHHHHHhccCCCCCeEeEC
Confidence 488888665554 678999999999999 67665444 3454433333332221 2367773
No 203
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=57.18 E-value=41 Score=23.06 Aligned_cols=50 Identities=20% Similarity=0.221 Sum_probs=32.2
Q ss_pred HHHHHHHHH----hCC-CeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029926 129 NDAARTLSD----FGV-PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 182 (185)
Q Consensus 129 ekA~~vLee----fGI-pyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLP 182 (185)
+++.+.|++ .|+ +++..+.. -. -...+.+.+++.+++.+|.++-+-..+.
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~--g~--~~~~I~~~a~~~~~dliV~G~~~~~~~~ 114 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLE--GV--PAEAILQAARAEKADLIVMGTRGLGALG 114 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEE--SS--HHHHHHHHHHHTTCSEEEEESSCTTCCS
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEe--cC--HHHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 344444544 789 88877663 22 3455667777888999988876544443
No 204
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=57.11 E-value=68 Score=25.06 Aligned_cols=53 Identities=11% Similarity=0.089 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCc
Q 029926 124 DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAH 180 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAh 180 (185)
+....+++.+.|++.|++++..+..- +-.+.+.+.+++.+++.+|.++-+-+.
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dLlV~G~~~~~~ 264 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIESG----TPHKAILAKREEINATTIFMGSRGAGS 264 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECS----CHHHHHHHHHHHTTCSEEEEECCCCSC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhcCcCEEEEeCCCCCC
Confidence 56778888888888999888777643 334556666677788888888765444
No 205
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=57.11 E-value=41 Score=25.91 Aligned_cols=67 Identities=15% Similarity=0.140 Sum_probs=39.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------------------CCchHHHHHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------------------QNRKGALSYALSA 163 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH---------------------------RtPe~l~ey~k~a 163 (185)
.+.++++|+|..|+--+...+++.|-+.|. .+-++..+ ..++.+.++++..
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA--AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSC--EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 345788999988544456666777766664 33333222 2334445555444
Q ss_pred hh--CCCeEEEEecCccC
Q 029926 164 KE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 164 e~--~GikVIIAvAG~AA 179 (185)
.+ ..++++|-.||...
T Consensus 96 ~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHTSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 32 35799999998653
No 206
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=57.09 E-value=61 Score=25.11 Aligned_cols=62 Identities=15% Similarity=0.303 Sum_probs=38.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHH------------------------HHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGAL------------------------SYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~------------------------ey~k~ae~-- 165 (185)
+.++++|+|..+ -+...+++.|-+-|.. |+-..|+++.++ ++++...+
T Consensus 8 ~gk~~lVTGas~--gIG~a~a~~l~~~G~~----V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASR--GIGKAIAELLAERGAK----VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSS--HHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE----EEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHc
Confidence 457999999987 4566777777777753 333345554444 33333322
Q ss_pred CCCeEEEEecCccC
Q 029926 166 RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 ~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 82 g~iD~lv~nAg~~~ 95 (248)
T 3op4_A 82 GGVDILVNNAGITR 95 (248)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36899999998653
No 207
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=57.01 E-value=65 Score=24.85 Aligned_cols=65 Identities=9% Similarity=0.110 Sum_probs=43.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------CCCchHHHHHHHHHhh--CCCeEEEEe
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------HQNRKGALSYALSAKE--RGIKIIIVG 174 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA--------------HRtPe~l~ey~k~ae~--~GikVIIAv 174 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.++++...+ .+++++|-.
T Consensus 13 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 13 FVSRSVLVTGGNR--GIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4567999999987 567788888888884 4444321 1234556666655432 468999999
Q ss_pred cCccC
Q 029926 175 DGVEA 179 (185)
Q Consensus 175 AG~AA 179 (185)
||...
T Consensus 89 Ag~~~ 93 (247)
T 1uzm_A 89 AGLSA 93 (247)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 99753
No 208
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=56.57 E-value=28 Score=26.42 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEE-cCC--------------------CCchHHHHHHHHHhhCCCeEEEEe
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKIL-SPH--------------------QNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVa-SAH--------------------RtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.|.+.+++..+.++++|++ -+||- +.+ ..-+.+.++++.|++.|+.|++..
T Consensus 39 ~~~~~~~~~l~~~k~~G~N-~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 39 RNKNRIEPEFKKLHDAGGN-SMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCC-EEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCc-EEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4677889999999999998 45652 111 123556788899999999999875
No 209
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=56.39 E-value=68 Score=24.89 Aligned_cols=44 Identities=11% Similarity=0.195 Sum_probs=26.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+..++++|+|..+. +...+++.|-+-|. .+.+ .-|+++.+.+..
T Consensus 27 l~~k~vlITGas~g--IG~~la~~l~~~G~--~V~~--~~r~~~~~~~~~ 70 (262)
T 3rkr_A 27 LSGQVAVVTGASRG--IGAAIARKLGSLGA--RVVL--TARDVEKLRAVE 70 (262)
T ss_dssp TTTCEEEESSTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHH
T ss_pred cCCCEEEEECCCCh--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHH
Confidence 34578999998774 56666666766664 2322 335555544443
No 210
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=56.28 E-value=74 Score=25.25 Aligned_cols=27 Identities=22% Similarity=0.215 Sum_probs=19.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
..++++|+|..+ -+...+++.|-+-|.
T Consensus 28 ~~k~~lVTGas~--GIG~aia~~la~~G~ 54 (280)
T 4da9_A 28 ARPVAIVTGGRR--GIGLGIARALAASGF 54 (280)
T ss_dssp CCCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCC
Confidence 357999999887 456666777766664
No 211
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=56.26 E-value=57 Score=23.95 Aligned_cols=38 Identities=13% Similarity=-0.039 Sum_probs=25.1
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHhCCCeeEEEEcCC
Q 029926 113 PIVGIIMESDSD-----LPVMNDAARTLSDFGVPYEIKILSPH 150 (185)
Q Consensus 113 ~kVaIIMGS~SD-----l~vmekA~~vLeefGIpyEvrVaSAH 150 (185)
++|.||.||..- ...++.+.+.|++-|-..++.++...
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 479999999872 44566777777777633455555543
No 212
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=56.26 E-value=62 Score=25.52 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=25.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS 158 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~e 158 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+ .-|+++.+.+
T Consensus 20 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~ 61 (277)
T 2rhc_B 20 QDSEVALVTGATS--GIGLEIARRLGKEGL--RVFV--CARGEEGLRT 61 (277)
T ss_dssp TTSCEEEEETCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 3457999999877 456666777766663 3333 3355554443
No 213
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=56.05 E-value=53 Score=24.20 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHHh-CCCeeEEEEcCCC-------------------C--chH--HHHHHHHHhhCCCeEEE
Q 029926 123 SDLPVMNDAARTLSDF-GVPYEIKILSPHQ-------------------N--RKG--ALSYALSAKERGIKIII 172 (185)
Q Consensus 123 SDl~vmekA~~vLeef-GIpyEvrVaSAHR-------------------t--Pe~--l~ey~k~ae~~GikVII 172 (185)
.+.+.+++..+.+.++ |+...+.+.-.|. . +++ +.++.+.+++.|..+.|
T Consensus 107 ~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 107 ADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CSHHHHHHHHHHHHHSSSCCSEEEEEECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 4577788888888888 8633344433332 1 245 77788888888888877
No 214
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=56.05 E-value=59 Score=26.14 Aligned_cols=43 Identities=7% Similarity=0.070 Sum_probs=25.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
..++++|+|..+ -+...+++.|-+-|. .+.+ .-|+++.+.+..
T Consensus 30 ~gk~vlVTGas~--gIG~~la~~l~~~G~--~V~~--~~r~~~~~~~~~ 72 (301)
T 3tjr_A 30 DGRAAVVTGGAS--GIGLATATEFARRGA--RLVL--SDVDQPALEQAV 72 (301)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHH
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEE--EECCHHHHHHHH
Confidence 457899999887 456666777766663 2322 335555544443
No 215
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=55.97 E-value=44 Score=27.14 Aligned_cols=57 Identities=25% Similarity=0.092 Sum_probs=35.6
Q ss_pred CeEEEEeccCC----C----HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 113 PIVGIIMESDS----D----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 113 ~kVaIIMGS~S----D----l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
++|.||.||.. + ...++.+.+.|++-|.++++.-+. .. .++.+..+..++ +++||-+
T Consensus 26 ~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~--~~-~Dv~~~~~~l~~--aD~iv~~ 90 (218)
T 3rpe_A 26 SNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD--QG-YDIESEIENYLW--ADTIIYQ 90 (218)
T ss_dssp CCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG--GC-CCHHHHHHHHHH--CSEEEEE
T ss_pred cceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC--Cc-cCHHHHHHHHHh--CCEEEEE
Confidence 47999999983 2 456788888888888765554443 22 334455544444 4555543
No 216
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=55.93 E-value=41 Score=26.06 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=42.1
Q ss_pred CCeEEEEec----cCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIME----SDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMG----S~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
...|++++- +.+| ....+.+.+.+++.|. ++.+...+- ++...++.+....++++-+|....
T Consensus 6 s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~ 74 (294)
T 3qk7_A 6 TDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGL--DLLLIPDEP-GEKYQSLIHLVETRRVDALIVAHT 74 (294)
T ss_dssp CCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTC--EEEEEEECT-TCCCHHHHHHHHHTCCSEEEECSC
T ss_pred cceEEEEecCCCccccChhHHHHHHHHHHHHHHCCC--EEEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCC
Confidence 346999997 4444 3567778888899986 445555443 666666777777777877776554
No 217
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=55.67 E-value=55 Score=25.21 Aligned_cols=61 Identities=11% Similarity=-0.042 Sum_probs=36.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHH------------------------HHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGA------------------------LSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l------------------------~ey~k~ae~-- 165 (185)
..++++|+|..+ -+...+++.|-+-|. . |+-.-|+++++ .++++...+
T Consensus 2 s~k~vlVTGas~--GIG~a~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 2 SLGHIIVTGAGS--GLGRALTIGLVERGH--Q--VSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp -CCEEEEESTTS--HHHHHHHHHHHHTTC--E--EEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC--E--EEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 346888888876 456666777766664 2 22233444443 344433322
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
..++++|-.||..
T Consensus 76 g~id~lvnnAg~~ 88 (235)
T 3l6e_A 76 GLPELVLHCAGTG 88 (235)
T ss_dssp CSCSEEEEECCCC
T ss_pred CCCcEEEECCCCC
Confidence 3578999999874
No 218
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=55.58 E-value=80 Score=25.46 Aligned_cols=65 Identities=11% Similarity=0.133 Sum_probs=44.3
Q ss_pred eEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEE--cCCCCchHHHHHHHHHhhCCCeEEEEecCcc
Q 029926 114 IVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKIL--SPHQNRKGALSYALSAKERGIKIIIVGDGVE 178 (185)
Q Consensus 114 kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVa--SAHRtPe~l~ey~k~ae~~GikVIIAvAG~A 178 (185)
+|++|.|..+. ..-.+.-.+.+++.|.+.++.+. +..-.|+.-.+.++..-++|+++|++.++..
T Consensus 131 ~Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~d~~ 199 (318)
T 2fqx_A 131 AVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGT 199 (318)
T ss_dssp EEEEEESCCSTTTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred EEEEEeCcccHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 89999886432 22344456778888987765543 2334577777777666567899999998864
No 219
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=55.51 E-value=69 Score=24.68 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=18.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 12 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 39 (260)
T 2zat_A 12 LENKVALVTASTD--GIGLAIARRLAQDGA 39 (260)
T ss_dssp TTTCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 3456888888876 455666666666663
No 220
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=55.45 E-value=38 Score=27.08 Aligned_cols=62 Identities=16% Similarity=0.219 Sum_probs=38.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCch------------------------HHHHHHHHHhh-
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe------------------------~l~ey~k~ae~- 165 (185)
.+.++++|+|..+-+ ...+++.|-+-|. ++.+ ..|+++ .+.++++...+
T Consensus 27 l~gk~vlVTGas~gI--G~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGI--GLAVARRLADEGC--HVLC--ADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp CTTCEEEETTTTSTH--HHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHH--HHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 346899999998864 4556666666664 2322 234444 34444433322
Q ss_pred -CCCeEEEEecCcc
Q 029926 166 -RGIKIIIVGDGVE 178 (185)
Q Consensus 166 -~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 101 ~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 101 FGGVDKLVANAGVV 114 (277)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 3689999999875
No 221
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=55.28 E-value=48 Score=26.40 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=20.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 30 l~gk~~lVTGas~--GIG~aia~~la~~G~ 57 (276)
T 3r1i_A 30 LSGKRALITGAST--GIGKKVALAYAEAGA 57 (276)
T ss_dssp CTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 3457999999987 456677777777774
No 222
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=55.25 E-value=21 Score=31.42 Aligned_cols=66 Identities=12% Similarity=0.070 Sum_probs=47.7
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCCC-------C-chHHHHHHHHHhhCCCeEEEEecCccCc
Q 029926 114 IVGIIMESDS----DLPVMNDAARTLSDFGVPYEIKILSPHQ-------N-RKGALSYALSAKERGIKIIIVGDGVEAH 180 (185)
Q Consensus 114 kVaIIMGS~S----Dl~vmekA~~vLeefGIpyEvrVaSAHR-------t-Pe~l~ey~k~ae~~GikVIIAvAG~AAh 180 (185)
+|+||.=|.. |.+..+.+.+.|+++|....+.= .+.+ + -+++.++.+...+..++.|+++-|+-+.
T Consensus 45 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~-~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga 122 (371)
T 3tla_A 45 TIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGK-LTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNS 122 (371)
T ss_dssp EEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECT-TTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSCG
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECC-chhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 6999987743 66789999999999998543220 0111 1 3567777777788889999999998553
No 223
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=55.16 E-value=29 Score=26.89 Aligned_cols=41 Identities=10% Similarity=0.044 Sum_probs=32.8
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029926 109 STDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ 151 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHR 151 (185)
..|+++|+|+.....+..-+-...++|..-| |++.++|.+.
T Consensus 6 ~~m~~~v~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~g 46 (208)
T 3ot1_A 6 QGMSKRILVPVAHGSEEMETVIIVDTLVRAG--FQVTMAAVGD 46 (208)
T ss_dssp ---CCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred cccCCeEEEEECCCCcHHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence 3466789999998888888888889999877 7999999873
No 224
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=54.93 E-value=30 Score=29.70 Aligned_cols=64 Identities=17% Similarity=0.177 Sum_probs=47.5
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCC--C-------C-chHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 114 IVGIIMESDS----DLPVMNDAARTLSDFGVPYEIKILSPH--Q-------N-RKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~S----Dl~vmekA~~vLeefGIpyEvrVaSAH--R-------t-Pe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+|+||.=|.. |.+..+.+.+.|+++|.... + +.| + + -+++.++.+...+..++.|+++-|+-+
T Consensus 14 ~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~--~-~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (331)
T 4e5s_A 14 EIRVISPSCSLSIVSTENRRLAVKRLTELGFHVT--F-STHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYN 90 (331)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEE--E-CTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEE--E-CCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 6999976544 57889999999999998543 2 222 1 1 256777777777888999999999854
Q ss_pred c
Q 029926 180 H 180 (185)
Q Consensus 180 h 180 (185)
.
T Consensus 91 ~ 91 (331)
T 4e5s_A 91 S 91 (331)
T ss_dssp G
T ss_pred H
Confidence 3
No 225
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=54.86 E-value=75 Score=24.89 Aligned_cols=28 Identities=7% Similarity=0.118 Sum_probs=18.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 19 l~~k~vlVTGas~--gIG~aia~~l~~~G~ 46 (273)
T 1ae1_A 19 LKGTTALVTGGSK--GIGYAIVEELAGLGA 46 (273)
T ss_dssp CTTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCcc--hHHHHHHHHHHHCCC
Confidence 3456888888876 445566666666663
No 226
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=54.82 E-value=27 Score=26.90 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=39.1
Q ss_pred CCeEEEEeccCCCHH------HHHHHHHHHHHhCCCee-EEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 112 TPIVGIIMESDSDLP------VMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~------vmekA~~vLeefGIpyE-vrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+++|+||+=|+.=.+ -..-....|+++|++.. ..++ .- . +.+.+-++++.+.+++++|.-.|.+.
T Consensus 7 ~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv-~D-d-~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 7 TRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVV-AD-G-SPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEE-CS-S-HHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEe-CC-H-HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 478999976542110 12345677899998643 3333 22 2 55555555554456899999888764
No 227
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=54.78 E-value=63 Score=25.61 Aligned_cols=44 Identities=14% Similarity=0.051 Sum_probs=26.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
.+.++++|+|..+- +...+++.|-+-|. . |+-.-|+++.+.+..
T Consensus 24 l~gk~~lVTGas~g--IG~aia~~la~~G~--~--V~~~~r~~~~~~~~~ 67 (271)
T 4ibo_A 24 LGGRTALVTGSSRG--LGRAMAEGLAVAGA--R--ILINGTDPSRVAQTV 67 (271)
T ss_dssp CTTCEEEETTCSSH--HHHHHHHHHHHTTC--E--EEECCSCHHHHHHHH
T ss_pred CCCCEEEEeCCCcH--HHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHH
Confidence 34679999998874 45666667766664 2 333345555444443
No 228
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=54.40 E-value=56 Score=26.02 Aligned_cols=66 Identities=11% Similarity=0.112 Sum_probs=40.0
Q ss_pred CCeEEEEeccCCCHH------HHHHHHHHHHHhCCC---eeEEEEcCCCCchHHHHHHHHHhhC-CCeEEEEecCccC
Q 029926 112 TPIVGIIMESDSDLP------VMNDAARTLSDFGVP---YEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEA 179 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~------vmekA~~vLeefGIp---yEvrVaSAHRtPe~l~ey~k~ae~~-GikVIIAvAG~AA 179 (185)
.++|+||+=|+.=.+ -..-..+.|+++|+. ....++ --.++.+.+-++++.++ +++++|.-.|.+.
T Consensus 3 ~~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV--~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~ 78 (195)
T 1di6_A 3 TLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLI--PDEQAIIEQTLCELVDEMSCHLVLTTGGTGP 78 (195)
T ss_dssp CEEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEE--ESCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CCEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 357888875543221 123467788999986 233333 23456666666655553 6899999888753
No 229
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=54.17 E-value=46 Score=28.49 Aligned_cols=66 Identities=15% Similarity=0.129 Sum_probs=47.7
Q ss_pred eEEEEeccCC-CHHHHHHHHHHHHHhCCCeeEEEEcCCC-------C-chHHHHHHHHHhhCCCeEEEEecCccCc
Q 029926 114 IVGIIMESDS-DLPVMNDAARTLSDFGVPYEIKILSPHQ-------N-RKGALSYALSAKERGIKIIIVGDGVEAH 180 (185)
Q Consensus 114 kVaIIMGS~S-Dl~vmekA~~vLeefGIpyEvrVaSAHR-------t-Pe~l~ey~k~ae~~GikVIIAvAG~AAh 180 (185)
+|+||.=|.. |.+..+.+.+.|+++|....+. -.+.+ + -+++.++.+...+..++.|+++=|+-++
T Consensus 19 ~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 19 RVALIAPASAIATDVLEATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp EEEEECCSBCCCHHHHHHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 5999987653 6777899999999999765432 11222 2 3456667777778889999999998553
No 230
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=53.89 E-value=42 Score=27.88 Aligned_cols=48 Identities=8% Similarity=-0.057 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC------CC-CchHHHHHHHHHhhCCCeEEEE
Q 029926 126 PVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 126 ~vmekA~~vLeefGIpyEvrVaSA------HR-tPe~l~ey~k~ae~~GikVIIA 173 (185)
+.++++.+.+++.|+..+..+..+ .| +|+.+.++++.+.+-|++.|--
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 178 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSL 178 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 567888899999999887766543 23 5899999999888889975433
No 231
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=53.33 E-value=32 Score=27.61 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=48.8
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCCchHHHHHHHHHh--hCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAK--ERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpy----EvrVaSAHRtPe~l~ey~k~ae--~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++- .++|=+|-=.|-...++++..+ ...++.+||..
T Consensus 17 ~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaLG 88 (168)
T 1ejb_A 17 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIG 88 (168)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEec
Confidence 4799999999988 77899999999999862 3456678888877777775332 45689888853
No 232
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=53.32 E-value=54 Score=25.65 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029926 122 DSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 182 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLP 182 (185)
......++++.+.++..|++++..+...+.. ...+.+.+++.+++.+|.+.-....+.
T Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~---~~~i~~~a~~~~~dliV~G~~~~~~~~ 104 (290)
T 3mt0_A 47 RDHSAALNDLAQELREEGYSVSTNQAWKDSL---HQTIIAEQQAEGCGLIIKQHFPDNPLK 104 (290)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEEECSSSH---HHHHHHHHHHHTCSEEEEECCCSCTTS
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCH---HHHHHHHHHhcCCCEEEEecccCCchh
Confidence 5566788888889999999999888733322 344555555677888888876555443
No 233
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.22 E-value=77 Score=25.00 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=19.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+- +...+++.|-+-|.
T Consensus 26 l~~k~vlVTGas~g--IG~aia~~la~~G~ 53 (269)
T 4dmm_A 26 LTDRIALVTGASRG--IGRAIALELAAAGA 53 (269)
T ss_dssp TTTCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 34679999998873 45566666666664
No 234
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=53.21 E-value=26 Score=27.68 Aligned_cols=60 Identities=13% Similarity=0.094 Sum_probs=46.7
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpy----EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|-=.|-...++++ ..+++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIalG 79 (154)
T 1hqk_A 13 LRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELAR---KEDIDAVIAIG 79 (154)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHT---CTTCCEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999888 77889999999999973 4567777777766666653 45689888753
No 235
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=53.17 E-value=39 Score=31.78 Aligned_cols=53 Identities=8% Similarity=0.136 Sum_probs=44.4
Q ss_pred cCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 121 SDSDLPVMNDAARTLSDFGVPYEIKILSP-------------HQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 121 S~SDl~vmekA~~vLeefGIpyEvrVaSA-------------HRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
+..|.+.+.+..+-+++.|||+|+-++.. .|-|+ ..+++++..++|.++++-+
T Consensus 173 ~Y~~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPd-p~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 173 GYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPD-FPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp TCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTT-HHHHHHHHHTTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHhcCCCcceEEEecHHHHhhcccccChhhCCC-HHHHHHHHHHcCceEEeee
Confidence 45688889999999999999999999883 46674 8889999999999887643
No 236
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=53.13 E-value=60 Score=25.95 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=26.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
..++++|+|..+ -+...+++.|-+-|. +|+-.-|+++.+.+..
T Consensus 7 ~gk~vlVTGas~--GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~ 49 (280)
T 3tox_A 7 EGKIAIVTGASS--GIGRAAALLFAREGA----KVVVTARNGNALAELT 49 (280)
T ss_dssp TTCEEEESSTTS--HHHHHHHHHHHHTTC----EEEECCSCHHHHHHHH
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC----EEEEEECCHHHHHHHH
Confidence 357899999887 455667777777674 2333445555544443
No 237
>3eik_A Tata-box-binding protein; DNA-binding, initiation factor, nucleus, transcription; 1.90A {Encephalitozoon cuniculi} PDB: 3oci_A 3oc3_C
Probab=53.11 E-value=11 Score=31.59 Aligned_cols=86 Identities=15% Similarity=0.141 Sum_probs=53.7
Q ss_pred eeeeccccchhhhhhhhhhhcCCCceeeecc--CCC----CCC------CCCeEEEEeccCCCHHH---HHHHHHHHHHh
Q 029926 74 PVLASSNGSATSTRKDYSSVREPSTVFEEEN--ANG----DST------DTPIVGIIMESDSDLPV---MNDAARTLSDF 138 (185)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ea--~~~----~~~------~~~kVaIIMGS~SDl~v---mekA~~vLeef 138 (185)
||+||-.-.| +=.++.+....++++|++|- +-. .+. ..+|+ |++|..|-.+. +++..+.|+++
T Consensus 47 NIVas~~l~~-~ldL~~ia~~~~n~eYePe~Fpglv~Rl~~Pk~t~LIF~SGKi-V~TGAkS~e~a~~A~~ki~~~L~~l 124 (218)
T 3eik_A 47 NVVATVNLSC-KLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKM-VITGAKSEKSSRMAAQRYAKIIHKL 124 (218)
T ss_dssp EEEEEEECSS-CCCHHHHHHHCTTEECCTTTCSSEEEEETTTTEEEEECTTSEE-EEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECCC-ccCHHHHHhhCCCcEEcCccCceEEEEecCCcEEEEEECCCeE-EEEecCCHHHHHHHHHHHHHHHHHc
Confidence 7888888777 66778888888999999883 322 111 12333 55666554332 46677888899
Q ss_pred CCCe---eEE----EEcCC-CCchHHHHHHH
Q 029926 139 GVPY---EIK----ILSPH-QNRKGALSYAL 161 (185)
Q Consensus 139 GIpy---Evr----VaSAH-RtPe~l~ey~k 161 (185)
|++. +++ |+|+- ..|=++++++.
T Consensus 125 G~~v~~~~fkIqNIvas~dl~f~I~Le~la~ 155 (218)
T 3eik_A 125 GFNATFDDFKIQNIVSSCDIKFSIRLEGLAY 155 (218)
T ss_dssp TCCCCCEEEEEEEEEEEEECSSCBCHHHHHH
T ss_pred CCCcccccceEEEEEEEEECCCcCcHHHHHH
Confidence 9753 222 55533 44555666664
No 238
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=53.11 E-value=81 Score=24.74 Aligned_cols=28 Identities=14% Similarity=0.057 Sum_probs=19.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+- +...+++.|-+-|.
T Consensus 9 l~~k~~lVTGas~g--IG~aia~~la~~G~ 36 (286)
T 3uve_A 9 VEGKVAFVTGAARG--QGRSHAVRLAQEGA 36 (286)
T ss_dssp TTTCEEEEESTTSH--HHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCch--HHHHHHHHHHHCCC
Confidence 34579999998874 56667777776664
No 239
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=53.08 E-value=70 Score=24.90 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=17.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 10 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 37 (256)
T 3gaf_A 10 LNDAVAIVTGAAA--GIGRAIAGTFAKAGA 37 (256)
T ss_dssp CTTCEEEECSCSS--HHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 3457888888877 345555555555553
No 240
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=53.04 E-value=65 Score=24.86 Aligned_cols=26 Identities=23% Similarity=0.440 Sum_probs=15.1
Q ss_pred chHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 153 RKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 153 Pe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
++.+.++++...+ .+++++|-.||..
T Consensus 63 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 90 (256)
T 1geg_A 63 RDQVFAAVEQARKTLGGFDVIVNNAGVA 90 (256)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4444444443322 2578888888864
No 241
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=53.00 E-value=82 Score=24.77 Aligned_cols=27 Identities=7% Similarity=0.218 Sum_probs=16.3
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 152 NRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 152 tPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
.++.+.++++...+ .+++++|-.||..
T Consensus 104 d~~~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 104 KKEEISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 34455555544322 3578999988865
No 242
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=52.98 E-value=62 Score=25.15 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=25.4
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+.++++|+|..+- +...+++.|-+-|. .+.+ .-|+++.+++..
T Consensus 6 ~~k~~lVTGas~G--IG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~ 48 (250)
T 3nyw_A 6 QKGLAIITGASQG--IGAVIAAGLATDGY--RVVL--IARSKQNLEKVH 48 (250)
T ss_dssp CCCEEEEESTTSH--HHHHHHHHHHHHTC--EEEE--EESCHHHHHHHH
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHH
Confidence 4578899998874 45666666666664 2322 345555544433
No 243
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=52.83 E-value=78 Score=24.70 Aligned_cols=28 Identities=11% Similarity=0.007 Sum_probs=18.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+.|.
T Consensus 29 l~~k~vlITGasg--gIG~~la~~L~~~G~ 56 (272)
T 1yb1_A 29 VTGEIVLITGAGH--GIGRLTAYEFAKLKS 56 (272)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 4457888999876 355666666666663
No 244
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=52.52 E-value=55 Score=25.61 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=25.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
+.++++|+|..+- +...+++.|-+-|. ++ +-..|+++.+.+..
T Consensus 9 ~~k~~lVTGas~g--IG~aia~~l~~~G~--~V--~~~~r~~~~~~~~~ 51 (267)
T 3t4x_A 9 KGKTALVTGSTAG--IGKAIATSLVAEGA--NV--LINGRREENVNETI 51 (267)
T ss_dssp TTCEEEETTCSSH--HHHHHHHHHHHTTC--EE--EEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC--EE--EEEeCCHHHHHHHH
Confidence 4578999998774 45566666666664 22 22345555554443
No 245
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=52.43 E-value=83 Score=24.68 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=44.4
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh-------CCCeeEEEEcCCCCchHHHHHHHHHh-hCCCeEEEEecC
Q 029926 113 PIVGIIMESDSD-----LPVMNDAARTLSDF-------GVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD-----l~vmekA~~vLeef-------GIpyEvrVaSAHRtPe~l~ey~k~ae-~~GikVIIAvAG 176 (185)
-+|+++.-.... .+..+.+...+++. |.++++.+....-.|+...+.++..- +++++.+|...+
T Consensus 5 i~IG~i~p~sg~~~~~~~~~~~g~~~a~~~~n~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~ 81 (358)
T 3hut_A 5 LLLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFS 81 (358)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECSS
T ss_pred EEEEEEeccCCchhhcCHHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCCC
Confidence 358888764433 23344455555554 66799999999999999888887776 777888886543
No 246
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=52.30 E-value=38 Score=25.81 Aligned_cols=67 Identities=18% Similarity=0.187 Sum_probs=38.9
Q ss_pred CCCCeEEEEeccC-------CCHHHHHHHHHH----HHHhCCCee-EEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCc
Q 029926 110 TDTPIVGIIMESD-------SDLPVMNDAART----LSDFGVPYE-IKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 110 ~~~~kVaIIMGS~-------SDl~vmekA~~v----LeefGIpyE-vrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
.|.++|+||+=|+ -|-.- .-.... |+++|+... ..+ .--.++.+.+-++++.+++++++|.-.|.
T Consensus 3 ~m~~~v~Ii~~GdEl~~G~i~D~n~-~~l~~~~~~~l~~~G~~v~~~~i--v~Dd~~~I~~~l~~a~~~~~DlVittGG~ 79 (167)
T 2g2c_A 3 AMHIKSAIIVVSDRISTGTRENKAL-PLLQRLMSDELQDYSYELISEVV--VPEGYDTVVEAIATALKQGARFIITAGGT 79 (167)
T ss_dssp -CEEEEEEEEECHHHHHTSSCCCHH-HHHHHHHCC----CEEEEEEEEE--ECSSHHHHHHHHHHHHHTTCSEEEEESCC
T ss_pred CCccEEEEEEECCcccCCceeccHH-HHHHHhHHhHHHHCCCEEeEEEE--eCCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 3567899887443 23221 234555 888887542 333 33556677777766666568999998887
Q ss_pred cC
Q 029926 178 EA 179 (185)
Q Consensus 178 AA 179 (185)
+.
T Consensus 80 g~ 81 (167)
T 2g2c_A 80 GI 81 (167)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 247
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=52.29 E-value=55 Score=25.10 Aligned_cols=46 Identities=9% Similarity=-0.036 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
.+.+.++++.+..+.+|+++-+- |-.++.+.++.+.+++.|+++.|
T Consensus 88 ~~~~~~~~~i~~A~~lGa~~v~~----~~~~~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 88 EKSSDWEKMFKFAKAMDLEFITC----EPALSDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp SSTTHHHHHHHHHHHTTCSEEEE----CCCGGGHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHHHHcCCCEEEe----cCCHHHHHHHHHHHHHhCCEEEE
Confidence 34455666666666676664322 22345566666666665655443
No 248
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=52.02 E-value=69 Score=25.25 Aligned_cols=28 Identities=18% Similarity=0.074 Sum_probs=19.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 25 l~~k~~lVTGas~--GIG~aia~~l~~~G~ 52 (277)
T 4fc7_A 25 LRDKVAFITGGGS--GIGFRIAEIFMRHGC 52 (277)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHTTTC
T ss_pred cCCCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 4567999999987 455666666666664
No 249
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=51.97 E-value=72 Score=25.16 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=39.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHH------------------------HHHHHhhC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS------------------------YALSAKER 166 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~e------------------------y~k~ae~~ 166 (185)
++.++++|+|..+ -+...+++.|-+-|. .+.+ .-|+++++++ +++.. .
T Consensus 14 l~gk~vlVTGas~--gIG~~~a~~L~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~ 85 (291)
T 3rd5_A 14 FAQRTVVITGANS--GLGAVTARELARRGA--TVIM--AVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--S 85 (291)
T ss_dssp CTTCEEEEECCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--C
T ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--C
Confidence 4567999999987 456778888877774 3333 3455544443 33322 3
Q ss_pred CCeEEEEecCccC
Q 029926 167 GIKIIIVGDGVEA 179 (185)
Q Consensus 167 GikVIIAvAG~AA 179 (185)
+++++|-.||...
T Consensus 86 ~iD~lv~nAg~~~ 98 (291)
T 3rd5_A 86 GADVLINNAGIMA 98 (291)
T ss_dssp CEEEEEECCCCCS
T ss_pred CCCEEEECCcCCC
Confidence 5799999998754
No 250
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=51.80 E-value=67 Score=24.20 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=42.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-----CCCchHHHHHHHHHhhCCCeEEEEecCcc
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-----HQNRKGALSYALSAKERGIKIIIVGDGVE 178 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA-----HRtPe~l~ey~k~ae~~GikVIIAvAG~A 178 (185)
+.++++|+|..+ -+...+++.|.+-|- .+.+++- -..++.+.++++.. .+++++|-.||..
T Consensus 5 ~~k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~D~~~~~~v~~~~~~~--g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTS--GIGAELAKQLESEHT--IVHVASRQTGLDISDEKSVYHYFETI--GAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTS--HHHHHHHHHHCSTTE--EEEEESGGGTCCTTCHHHHHHHHHHH--CSEEEEEECCCCC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEecCCcccCCCCHHHHHHHHHHh--CCCCEEEECCCCC
Confidence 468999999988 456777777766663 4444431 12466777777654 4589999999975
No 251
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=51.63 E-value=89 Score=24.79 Aligned_cols=29 Identities=28% Similarity=0.251 Sum_probs=20.1
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.++.++++|+|..+- +...+++.|-+-|.
T Consensus 22 ~l~~k~~lVTGas~G--IG~~ia~~la~~G~ 50 (281)
T 3v2h_A 22 SMMTKTAVITGSTSG--IGLAIARTLAKAGA 50 (281)
T ss_dssp CCTTCEEEEETCSSH--HHHHHHHHHHHTTC
T ss_pred ccCCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 345679999998874 45566666666664
No 252
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=51.52 E-value=84 Score=24.80 Aligned_cols=62 Identities=11% Similarity=0.157 Sum_probs=41.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC----------------chHHHHHHHHHhh--CCCeEEEE
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN----------------RKGALSYALSAKE--RGIKIIIV 173 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt----------------Pe~l~ey~k~ae~--~GikVIIA 173 (185)
+.++++|+|..+ -+...+++.|-+-|. ++.+ .-|+ ++.+.++++...+ .+++++|-
T Consensus 27 ~gk~vlVTGas~--gIG~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAG--GIGGAVVTALRAAGA--RVAV--ADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTS--HHHHHHHHHHHHTTC--EEEE--CSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999999988 567788888888885 3333 3333 3445555544332 46899999
Q ss_pred ecCccC
Q 029926 174 GDGVEA 179 (185)
Q Consensus 174 vAG~AA 179 (185)
.||...
T Consensus 101 nAg~~~ 106 (266)
T 3uxy_A 101 NAGVIS 106 (266)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 999754
No 253
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=51.49 E-value=72 Score=24.43 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=17.5
Q ss_pred CCchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 151 QNRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 151 RtPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
..++.+.++++...+ .+++++|-.||..
T Consensus 64 ~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 64 ANAEDVTNMVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 345555555554432 3688999888864
No 254
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=51.31 E-value=31 Score=29.58 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|++|||.. +. .|-..-=++++++++++++.++|++||+=
T Consensus 29 Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD 99 (549)
T 4aie_A 29 GDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMD 99 (549)
T ss_dssp CCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 47777666678899999963 22 22223346889999999999999999973
No 255
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=51.30 E-value=63 Score=25.07 Aligned_cols=65 Identities=9% Similarity=0.021 Sum_probs=38.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC------------------------CCCchHHHHHHHHHhhC--
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP------------------------HQNRKGALSYALSAKER-- 166 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA------------------------HRtPe~l~ey~k~ae~~-- 166 (185)
.++++|+|..|.--+...+++.|-+-|. ++.+++- -..++.+.++++...++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4688899987444466677777777774 3333321 12234444455444332
Q ss_pred CCeEEEEecCccC
Q 029926 167 GIKIIIVGDGVEA 179 (185)
Q Consensus 167 GikVIIAvAG~AA 179 (185)
+++++|-.||...
T Consensus 87 ~iD~lv~~Ag~~~ 99 (265)
T 1qsg_A 87 KFDGFVHSIGFAP 99 (265)
T ss_dssp SEEEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 5799999998653
No 256
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=51.12 E-value=27 Score=29.82 Aligned_cols=58 Identities=12% Similarity=-0.004 Sum_probs=44.4
Q ss_pred EEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEc---CCCC-chHHHHHHHHHhhCCCeEEE
Q 029926 115 VGIIMESDSDL--------------PVMNDAARTLSDFGVPYEIKILS---PHQN-RKGALSYALSAKERGIKIII 172 (185)
Q Consensus 115 VaIIMGS~SDl--------------~vmekA~~vLeefGIpyEvrVaS---AHRt-Pe~l~ey~k~ae~~GikVII 172 (185)
+.-|..|.||. +.+.++.+.+++.|+...+.+.. +.|. |+.+.++++.+.+-|++.|-
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 187 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIF 187 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEE
Confidence 44557778886 67788888889999987776655 4454 78899999999998987543
No 257
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=51.00 E-value=22 Score=26.44 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHH
Q 029926 126 PVMNDAARTLSDFGVPYEIKILSPHQNRKGALS 158 (185)
Q Consensus 126 ~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~e 158 (185)
|.+.++.-+|++.||+||..-+.....|+.+.+
T Consensus 13 P~~~rvr~~L~e~gi~~e~~~v~~~~~~~~~~~ 45 (210)
T 4hoj_A 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLAV 45 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHHHHH
T ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCHHHHH
Confidence 789999999999999999988876666654433
No 258
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=50.99 E-value=25 Score=27.87 Aligned_cols=60 Identities=7% Similarity=-0.027 Sum_probs=46.8
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpy----EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|-=.|-...++++ ..+++.+||..
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 78 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAE---TGRYGAVLGTA 78 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---HTCCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999988 77889999999999974 3456667777766666654 45689888853
No 259
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=50.98 E-value=39 Score=28.87 Aligned_cols=51 Identities=14% Similarity=0.322 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. +. .|-+..=++++++++++++.++|++||+=
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 89 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLD 89 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 58888877889999999952 33 34444457899999999999999999973
No 260
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=50.79 E-value=11 Score=32.81 Aligned_cols=64 Identities=8% Similarity=-0.027 Sum_probs=42.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeE-EEEcCCCCchHHHHHHHHHhhCC---CeEEEEecCccC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERG---IKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEv-rVaSAHRtPe~l~ey~k~ae~~G---ikVIIAvAG~AA 179 (185)
.++.||++..-.. ....+.|++-|+++.+ .-...+.+.+.+++.++.+++.+ +++|||+-|++.
T Consensus 54 ~~~liVtd~~~~~---~~l~~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~ 121 (375)
T 3rf7_A 54 DFVVFLVDDVHQH---KPLAARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGST 121 (375)
T ss_dssp CCEEEEEEGGGTT---SHHHHHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHH
T ss_pred CeEEEEECchhhh---hHHHHHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 3577777643211 1344555555777642 22357778888888888888777 999999999874
No 261
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=50.78 E-value=82 Score=24.17 Aligned_cols=29 Identities=3% Similarity=0.169 Sum_probs=18.5
Q ss_pred CCchHHHHHHHHHhh--CCCeEEEEecCccC
Q 029926 151 QNRKGALSYALSAKE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 151 RtPe~l~ey~k~ae~--~GikVIIAvAG~AA 179 (185)
..++.+.++++...+ .+++++|-.||...
T Consensus 64 ~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 94 (246)
T 3osu_A 64 ADADEVKAMIKEVVSQFGSLDVLVNNAGITR 94 (246)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 455666666654432 36889998888653
No 262
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=50.74 E-value=89 Score=24.54 Aligned_cols=64 Identities=11% Similarity=0.061 Sum_probs=40.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------------------------CCCchHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------------------------HQNRKGALS 158 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA--------------------------------HRtPe~l~e 158 (185)
++.++++|+|..+ -+...+++.|-+-|. .+.+++- -..++.+.+
T Consensus 4 l~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 4 LSGKTLFITGASR--GIGLAIALRAARDGA--NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCcEEEEECCCC--hHHHHHHHHHHHCCC--EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 4567899999887 556677777777774 3333321 123445555
Q ss_pred HHHHHhh--CCCeEEEEecCcc
Q 029926 159 YALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 159 y~k~ae~--~GikVIIAvAG~A 178 (185)
+++...+ .+++++|-.||..
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcc
Confidence 5554433 3689999999875
No 263
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=50.74 E-value=37 Score=26.12 Aligned_cols=40 Identities=10% Similarity=0.016 Sum_probs=32.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN 152 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt 152 (185)
|+.+|+|+.....+..-+-...++|++-| |++.++|....
T Consensus 1 M~~kV~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~ 40 (205)
T 2ab0_A 1 MSASALVCLAPGSEETEAVTTIDLLVRGG--IKVTTASVASD 40 (205)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEECSST
T ss_pred CCcEEEEEEcCCCcHHHHHHHHHHHHHCC--CEEEEEeCCCC
Confidence 34579999998888777777888999887 68889998764
No 264
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=50.69 E-value=82 Score=24.11 Aligned_cols=27 Identities=7% Similarity=0.142 Sum_probs=17.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
++.++++|+|..+ -+...+++.|-+-|
T Consensus 12 l~~k~vlITGasg--giG~~la~~l~~~G 38 (266)
T 1xq1_A 12 LKAKTVLVTGGTK--GIGHAIVEEFAGFG 38 (266)
T ss_dssp CTTCEEEETTTTS--HHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCC
Confidence 3456888888876 35556666666656
No 265
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=50.66 E-value=18 Score=31.62 Aligned_cols=52 Identities=10% Similarity=0.075 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCe-------------------------eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029926 127 VMNDAARTLSDFGVPY-------------------------EIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 181 (185)
Q Consensus 127 vmekA~~vLeefGIpy-------------------------EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhL 181 (185)
+-..+.+.|+.+||+. .-.|...|.....+.++.++ ++|+|+++|...-+
T Consensus 162 Tp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~-----ADIvV~A~G~p~~i 236 (303)
T 4b4u_A 162 TPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQ-----ADIIVGAVGKAELI 236 (303)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHT-----CSEEEECSCSTTCB
T ss_pred cHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhc-----CCeEEeccCCCCcc
Q ss_pred cC
Q 029926 182 SG 183 (185)
Q Consensus 182 PG 183 (185)
++
T Consensus 237 ~~ 238 (303)
T 4b4u_A 237 QK 238 (303)
T ss_dssp CG
T ss_pred cc
No 266
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=50.33 E-value=89 Score=24.67 Aligned_cols=27 Identities=22% Similarity=0.205 Sum_probs=19.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...++..|-+-|.
T Consensus 26 ~~k~~lVTGas~--GIG~aia~~la~~G~ 52 (267)
T 3u5t_A 26 TNKVAIVTGASR--GIGAAIAARLASDGF 52 (267)
T ss_dssp -CCEEEEESCSS--HHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 457999999887 456666677766664
No 267
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=50.12 E-value=78 Score=25.17 Aligned_cols=61 Identities=18% Similarity=0.348 Sum_probs=44.4
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCC-----------------------eeEEEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 116 GIIMESDSDLPVMNDAARTLSDFGVP-----------------------YEIKILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 116 aIIMGS~SDl~vmekA~~vLeefGIp-----------------------yEvrVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
.++.=|+-|..--.+-.+.+++-|+. .++-|+-..-.-+....|+++++++|+.||+
T Consensus 29 vvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 29 VVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp EEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 34455667766666666666666663 3677777777778888999999999999998
Q ss_pred EecC
Q 029926 173 VGDG 176 (185)
Q Consensus 173 AvAG 176 (185)
+-..
T Consensus 109 vynn 112 (162)
T 2l82_A 109 VYNN 112 (162)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7643
No 268
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=49.85 E-value=84 Score=24.28 Aligned_cols=62 Identities=3% Similarity=-0.034 Sum_probs=43.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCCchHHHHHHHHHhh--CCCeEEEEecCc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-------------HQNRKGALSYALSAKE--RGIKIIIVGDGV 177 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA-------------HRtPe~l~ey~k~ae~--~GikVIIAvAG~ 177 (185)
.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ ..++++|-.||.
T Consensus 22 ~k~vlITGas~--gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~ 97 (251)
T 3orf_A 22 SKNILVLGGSG--ALGAEVVKFFKSKSWN--TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG 97 (251)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTCE--EEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 46899999987 4677888888888853 433331 2446677777776643 357999999996
Q ss_pred c
Q 029926 178 E 178 (185)
Q Consensus 178 A 178 (185)
.
T Consensus 98 ~ 98 (251)
T 3orf_A 98 W 98 (251)
T ss_dssp C
T ss_pred C
Confidence 4
No 269
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=49.81 E-value=59 Score=25.82 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=20.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 31 l~gk~~lVTGas~--GIG~aia~~la~~G~ 58 (275)
T 4imr_A 31 LRGRTALVTGSSR--GIGAAIAEGLAGAGA 58 (275)
T ss_dssp CTTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 3457999999987 456667777777774
No 270
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.79 E-value=31 Score=24.30 Aligned_cols=45 Identities=11% Similarity=0.126 Sum_probs=31.1
Q ss_pred eEEEEeccCCCHHHHH------HHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHH
Q 029926 114 IVGIIMESDSDLPVMN------DAARTLSDFGVPYEIKILSPHQNRKGALSYALS 162 (185)
Q Consensus 114 kVaIIMGS~SDl~vme------kA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ 162 (185)
+|.|.+-+ .=+.++ +|...|++.||+|+..=+.. .|+...++.+.
T Consensus 9 ~V~vy~~~--~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~--~~~~~~~l~~~ 59 (111)
T 2ct6_A 9 VIRVFIAS--SSGFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN 59 (111)
T ss_dssp CEEEEECS--SCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT--CHHHHHHHHHS
T ss_pred EEEEEEcC--CCCCcccchhHHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHH
Confidence 46666543 445666 89999999999997766654 46665556554
No 271
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=49.78 E-value=74 Score=23.34 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=42.2
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCe---------------------eEEEEcCCCCchHHHHHHHHHhhCCCeEE
Q 029926 115 VGIIMESDSDLPVMNDAARTLSDFGVPY---------------------EIKILSPHQNRKGALSYALSAKERGIKII 171 (185)
Q Consensus 115 VaIIMGS~SDl~vmekA~~vLeefGIpy---------------------EvrVaSAHRtPe~l~ey~k~ae~~GikVI 171 (185)
-.++.|.-+-...++.....|..+|++. -+-++|.-....++.+.++.++++|++|+
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi 118 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTM 118 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEE
Confidence 4566677777888888888888888864 23456666667778888888888887765
No 272
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=49.78 E-value=54 Score=26.43 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=42.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh--------------CCCeEEEEecCccC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE--------------RGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~--------------~GikVIIAvAG~AA 179 (185)
+.++|.|. . ...+.++..|.+.| .++.|. .|++++.+++.+.... .+++++|..+|...
T Consensus 120 ~~vlvlGa-G--g~g~a~a~~L~~~G--~~v~v~--~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 120 QHVLILGA-G--GATKGVLLPLLQAQ--QNIVLA--NRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CEEEEECC-S--HHHHTTHHHHHHTT--CEEEEE--ESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CEEEEECC-c--HHHHHHHHHHHHCC--CEEEEE--ECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 46677787 3 57888899999999 566664 7999999888865321 26789998887654
No 273
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=49.52 E-value=35 Score=29.30 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 123 SDLPVMNDAARTLSDFGVPY------------------E-IKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy------------------E-vrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
-|+.-+.+-.+-|+++||.. + ..|-+..=++++++++++++.++|++||+=+
T Consensus 47 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 47 GTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 47777777779999999963 2 2333344578999999999999999998743
No 274
>1ais_A TBP, protein (tata-binding protein); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: d.129.1.1 d.129.1.1 PDB: 1d3u_A* 1pcz_A
Probab=49.32 E-value=23 Score=28.44 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=55.8
Q ss_pred eeeeeccccchhhhhhhhhhhcCCCceeeecc--CCC----CCCC------CCeEEEEeccCCCHHH---HHHHHHHHHH
Q 029926 73 IPVLASSNGSATSTRKDYSSVREPSTVFEEEN--ANG----DSTD------TPIVGIIMESDSDLPV---MNDAARTLSD 137 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ea--~~~----~~~~------~~kVaIIMGS~SDl~v---mekA~~vLee 137 (185)
-||+||-+-.| +=.++.+...+++++|+++- +.. .+.. .++ .+++|..|-.+. +++....|++
T Consensus 12 ~NvVas~~l~~-~ldL~~ia~~~~n~eY~P~~fpgli~Rl~~P~~t~lIF~SGK-iv~TGakS~~~~~~a~~~i~~~L~~ 89 (182)
T 1ais_A 12 ENIVASVDLFA-QLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGK-LVVTGAKSVQDIERAVAKLAQKLKS 89 (182)
T ss_dssp EEEEEEEECCS-CCCHHHHTTTSTTCBCCTTTCSSEEEECSSSCCEEEECTTSE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCC-eeCHHHHHhhCCCcEECCCccccEEEEcCCCcEEEEEeCCCe-EEEecCCCHHHHHHHHHHHHHHHHH
Confidence 37888888877 77788888889999999883 322 1111 223 356775554332 5566778999
Q ss_pred hCCCe----eEE----EEcCC-CCchHHHHHHHH
Q 029926 138 FGVPY----EIK----ILSPH-QNRKGALSYALS 162 (185)
Q Consensus 138 fGIpy----Evr----VaSAH-RtPe~l~ey~k~ 162 (185)
+|++. +++ |+|+. ..+=+|++++..
T Consensus 90 lG~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~ 123 (182)
T 1ais_A 90 IGVKFKRAPQIDVQNMVFSGDIGREFNLDVVALT 123 (182)
T ss_dssp TTCCCSSSCEEEEEEEEEEEECSSCCCHHHHHHH
T ss_pred cCCCcccccceEEEEEEEEEEcCCccCHHHHHhh
Confidence 99873 443 66643 445556666643
No 275
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=49.30 E-value=95 Score=24.47 Aligned_cols=64 Identities=17% Similarity=0.178 Sum_probs=42.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------------CCCchHHHHHHHHHhh--CCCeE
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-------------------HQNRKGALSYALSAKE--RGIKI 170 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA-------------------HRtPe~l~ey~k~ae~--~GikV 170 (185)
+.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ .++++
T Consensus 15 ~~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 90 (266)
T 3p19_A 15 MKKLVVITGASS--GIGEAIARRFSEEGHP--LLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA 90 (266)
T ss_dssp CCCEEEEESTTS--HHHHHHHHHHHHTTCC--EEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 457999999987 4667788888888853 322221 1234555566654433 36899
Q ss_pred EEEecCccC
Q 029926 171 IIVGDGVEA 179 (185)
Q Consensus 171 IIAvAG~AA 179 (185)
+|-.||...
T Consensus 91 lvnnAg~~~ 99 (266)
T 3p19_A 91 IVNNAGMML 99 (266)
T ss_dssp EEECCCCCC
T ss_pred EEECCCcCC
Confidence 999999753
No 276
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=49.05 E-value=7.9 Score=29.30 Aligned_cols=52 Identities=15% Similarity=0.180 Sum_probs=29.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEE--cC--CCCchHHHHHHHHHhhCCCeEEEE
Q 029926 122 DSDLPVMNDAARTLSDFGVPYEIKIL--SP--HQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpyEvrVa--SA--HRtPe~l~ey~k~ae~~GikVIIA 173 (185)
.||+..+..+.+.|++.||+|++.-. ++ ..+.+++.++..--.++-+|-++.
T Consensus 2 ~~~~~~~t~~~~~L~~~~i~y~~~~~~h~~~~~~~~~e~a~~l~~~~~~~~Ktlv~ 57 (166)
T 2dxa_A 2 SSGSSGMTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLV 57 (166)
T ss_dssp ------CCHHHHHHHHTTCCCEEEECCCCTTSCCSSCHHHHHHTCCTTTEEEEEEE
T ss_pred CCCCCchhHHHHHHHHCCCCcEEEEEecCCcccchHHHHHHHcCCCHHHeeEEEEE
Confidence 37788889999999999999998643 22 256666666653222332344433
No 277
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=49.00 E-value=92 Score=24.21 Aligned_cols=28 Identities=21% Similarity=0.035 Sum_probs=18.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
...++++|+|..+ -+...+++.|-+-|.
T Consensus 11 l~gk~vlVTGas~--gIG~~ia~~l~~~G~ 38 (278)
T 3sx2_A 11 LTGKVAFITGAAR--GQGRAHAVRLAADGA 38 (278)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 3457888998877 345566666666664
No 278
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=48.90 E-value=27 Score=27.68 Aligned_cols=60 Identities=8% Similarity=-0.129 Sum_probs=46.7
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpy----EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|-=.|-...++++ ..+++.+||..
T Consensus 11 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 77 (158)
T 1di0_A 11 FKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLAR---TGRYAAIVGAA 77 (158)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999988 77889999999999874 4456677777766666654 45689988853
No 279
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=48.88 E-value=30 Score=28.42 Aligned_cols=49 Identities=6% Similarity=-0.033 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcC------CC-CchHHHHHHHHHhhCCCeEEE
Q 029926 124 DLPVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpyEvrVaSA------HR-tPe~l~ey~k~ae~~GikVII 172 (185)
+++.++++.+.+++.|++.+..|..+ .| +|+++.++++.+.+-|++.|-
T Consensus 118 ~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 118 SIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 66777888899999999988666644 33 689999999988888886543
No 280
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=48.83 E-value=80 Score=24.17 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=37.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchH------------------------HHHHHHHHhh-
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKG------------------------ALSYALSAKE- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~------------------------l~ey~k~ae~- 165 (185)
++.++++|+|..+- +...+++.|-+-|. .+.+ ..|+++. +.+++++..+
T Consensus 7 l~~k~vlITGas~g--IG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 7 LEGKVALITGAGSG--FGEGMAKRFAKGGA--KVVI--VDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp TTTCEEEEETTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch--HHHHHHHHHHHCCC--EEEE--EcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 34578999998874 45566666666663 2222 3344444 4444443322
Q ss_pred -CCCeEEEEecCccC
Q 029926 166 -RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 -~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 81 ~g~id~li~~Ag~~~ 95 (261)
T 3n74_A 81 FGKVDILVNNAGIGH 95 (261)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCccCC
Confidence 26799999998753
No 281
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=48.83 E-value=95 Score=24.65 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=39.4
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCch------------------------HHHHHHHHHhh
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE 165 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe------------------------~l~ey~k~ae~ 165 (185)
.++.++++|+|..+ -+...+++.|-+-|. .+.+ ..|+++ .+.++++...+
T Consensus 24 ~l~~k~vlVTGas~--GIG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 24 DLNQRVCIVTGGGS--GIGRATAELFAKNGA--YVVV--ADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp TTTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34568999999987 456677777777775 2222 234444 44444443322
Q ss_pred --CCCeEEEEecCcc
Q 029926 166 --RGIKIIIVGDGVE 178 (185)
Q Consensus 166 --~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 98 ~~g~iD~lv~nAg~~ 112 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFG 112 (277)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCcC
Confidence 2689999999864
No 282
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=48.73 E-value=88 Score=24.50 Aligned_cols=27 Identities=19% Similarity=0.123 Sum_probs=17.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 5 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 31 (280)
T 1xkq_A 5 SNKTVIITGSSN--GIGRTTAILFAQEGA 31 (280)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 446788888776 345556666665553
No 283
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=48.70 E-value=94 Score=24.21 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=37.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH------------------------HHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY------------------------ALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey------------------------~k~ae~-- 165 (185)
+.++++|+|..+- +...+++.|-+-|. ++ +-..|+++.+.+. ++...+
T Consensus 7 ~gk~~lVTGas~g--IG~a~a~~l~~~G~--~V--~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHG--MGLATVRRLVEGGA--EV--LLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSH--HHHHHHHHHHHTTC--EE--EEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH--HHHHHHHHHHHCCC--EE--EEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 4578999998874 56667777777774 22 2233555544443 332221
Q ss_pred CCCeEEEEecCccC
Q 029926 166 RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 ~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 81 g~id~lv~nAg~~~ 94 (255)
T 4eso_A 81 GAIDLLHINAGVSE 94 (255)
T ss_dssp SSEEEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 35788888888753
No 284
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=48.68 E-value=63 Score=25.30 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=37.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC------------------------CCCchHHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP------------------------HQNRKGALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA------------------------HRtPe~l~ey~k~ae~-- 165 (185)
+.++++|+|..|.--+...+++.|-+-|. ++.+++- -..++.+.++++...+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34678888876333456666666666663 3333321 1223444444544322
Q ss_pred CCCeEEEEecCccC
Q 029926 166 RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 ~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 83 g~id~lv~nAg~~~ 96 (275)
T 2pd4_A 83 GSLDFIVHSVAFAP 96 (275)
T ss_dssp SCEEEEEECCCCCC
T ss_pred CCCCEEEECCccCc
Confidence 25799999998753
No 285
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=48.68 E-value=89 Score=24.39 Aligned_cols=28 Identities=4% Similarity=-0.008 Sum_probs=16.6
Q ss_pred CCchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 151 QNRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 151 RtPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
..++.+.++++...+ ..++++|-.||..
T Consensus 64 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 64 GQPAKIKEMFQQIDETFGRLDVFVNNAASG 93 (258)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 345555555544422 3578888888854
No 286
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=48.54 E-value=83 Score=25.03 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=41.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHh-hCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae-~~GikVIIAvA 175 (185)
++.++++|+|..+ -+...+++.|-+-|. .+.++ .+|+++.+.+..+..+ ..|.++.+..+
T Consensus 7 l~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 67 (291)
T 1e7w_A 7 PTVPVALVTGAAK--RLGRSIAEGLHAEGY--AVCLH-YHRSAAEANALSATLNARRPNSAITVQA 67 (291)
T ss_dssp -CCCEEEETTCSS--HHHHHHHHHHHHTTC--EEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred CCCCEEEEECCCc--hHHHHHHHHHHHCCC--eEEEE-cCCCHHHHHHHHHHHhhhcCCeeEEEEe
Confidence 3457999999987 567888888888885 33332 3499999988887665 44445544433
No 287
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=48.47 E-value=81 Score=24.82 Aligned_cols=63 Identities=8% Similarity=0.040 Sum_probs=45.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+|+||.-.+.....++...+.+++.|+....... .-.........++..++.+.+|||....
T Consensus 131 ~~vaii~~~d~~~~~~~~~~~~~~~~g~~v~~~~~-~~~~~~d~~~~l~~i~~~~~~vIv~~~~ 193 (389)
T 4gpa_A 131 NCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICV-ENFNDVSYRQLLEELDRRQEKKFVIDCE 193 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHTTTCEEEEEEC-TTCCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cEEEEEEecchhhHHHHHHHHHHHhcCceEEEEee-cCCcchhHHHHHHHhhccCCcEEEEEec
Confidence 47999988777778888888888999987655443 3334455666777777777888887653
No 288
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=48.35 E-value=27 Score=31.27 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=45.3
Q ss_pred CeEEEEecc---CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMES---DSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS---~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
..++||+|+ ..-+.+++...+.|++-|.++.+-+.+ .=+|++|..| + +++||-+|
T Consensus 265 ~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk~y~i~vg-~inp~KLanF-~------iD~fV~va 322 (378)
T 3lzd_A 265 KKFGVIVSIKKGQLRLAEAKRIVKLLKKHGREARLIVMN-DVNYHKLEGF-P------FEAYVVVA 322 (378)
T ss_dssp CEEEEEEECSTTTCCHHHHHHHHHHHHHTTCEEEEEEES-SCCHHHHTTS-C------CSEEEECS
T ss_pred CEEEEEEeCCccCCCHHHHHHHHHHHHHcCCcEEEEEeC-CCCHHHHhCC-C------CCEEEEec
Confidence 579999988 567888999999999999998877776 7789988876 3 77777665
No 289
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=48.09 E-value=79 Score=23.80 Aligned_cols=24 Identities=25% Similarity=0.297 Sum_probs=14.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
++++|+|..+ -+...+++.|-+-|
T Consensus 3 k~vlITGas~--gIG~~ia~~l~~~G 26 (235)
T 3l77_A 3 KVAVITGASR--GIGEAIARALARDG 26 (235)
T ss_dssp CEEEEESCSS--HHHHHHHHHHHHTT
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCC
Confidence 5677777766 34455555555555
No 290
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=48.09 E-value=93 Score=25.57 Aligned_cols=63 Identities=5% Similarity=0.004 Sum_probs=40.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+||.-++--...++...+.+++.|+.......-.-....+...+++..++.+.+|||...
T Consensus 131 ~~vaii~d~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~d~~~~l~~ik~~~~~vii~~~ 193 (389)
T 3o21_A 131 EKFVYLYDTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDC 193 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHHTTCEEEEEECTTCCCTHHHHHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEEcCcHHHHHHHHHHHHhhcCCCeEEEEEecCCCCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 479999822222356777888889999876544321112334677788888888888888754
No 291
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=47.61 E-value=29 Score=27.73 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=19.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 32 ~gk~~lVTGas~--GIG~aia~~la~~G~ 58 (281)
T 4dry_A 32 EGRIALVTGGGT--GVGRGIAQALSAEGY 58 (281)
T ss_dssp --CEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 457999999887 456677777777774
No 292
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=47.59 E-value=95 Score=23.93 Aligned_cols=27 Identities=22% Similarity=0.178 Sum_probs=17.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (263)
T 3ai3_A 6 SGKVAVITGSSS--GIGLAIAEGFAKEGA 32 (263)
T ss_dssp TTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 456788888776 345556666665553
No 293
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=47.43 E-value=1e+02 Score=26.91 Aligned_cols=91 Identities=20% Similarity=0.255 Sum_probs=50.1
Q ss_pred ceeeeeccccchhhhhhhhhhhcCCCceeeeccCCC----------CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCC
Q 029926 72 TIPVLASSNGSATSTRKDYSSVREPSTVFEEENANG----------DSTDTPIVGIIMESDSDLPVMNDAARTLSDFGVP 141 (185)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ea~~~----------~~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIp 141 (185)
.+||+.+.|+..++.++..-....-..-+.....+. .....-.|++..|...| ..+..+.|-+.|++
T Consensus 46 ~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~s~e~~~~~i~~vk~~~~l~vga~vg~~~~---~~~~~~~lieaGvd 122 (366)
T 4fo4_A 46 NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKISGGLRVGAAVGAAPG---NEERVKALVEAGVD 122 (366)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTTTSCCCEEECCSCTT---CHHHHHHHHHTTCS
T ss_pred CCCEEeCCCCCCChHHHHHHHHHcCCceEeecCCCHHHHHHHHHHHHhcCceeEEEEeccChh---HHHHHHHHHhCCCC
Confidence 579999999988777766443433333222211111 01111236666665433 23334556667876
Q ss_pred eeEEEEcCCCCchHHHHHHHHHhhC
Q 029926 142 YEIKILSPHQNRKGALSYALSAKER 166 (185)
Q Consensus 142 yEvrVaSAHRtPe~l~ey~k~ae~~ 166 (185)
+ +.|-++|-.|+...+.++..++.
T Consensus 123 ~-I~idta~G~~~~~~~~I~~ik~~ 146 (366)
T 4fo4_A 123 V-LLIDSSHGHSEGVLQRIRETRAA 146 (366)
T ss_dssp E-EEEECSCTTSHHHHHHHHHHHHH
T ss_pred E-EEEeCCCCCCHHHHHHHHHHHHh
Confidence 4 44447888888777766665544
No 294
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=47.37 E-value=25 Score=28.68 Aligned_cols=88 Identities=10% Similarity=0.085 Sum_probs=56.2
Q ss_pred eeeeeccccchhhhhhhhhhhcCCCceeeecc--CCC----CCCC------CCeEEEEeccCCCHHH---HHHHHHHHHH
Q 029926 73 IPVLASSNGSATSTRKDYSSVREPSTVFEEEN--ANG----DSTD------TPIVGIIMESDSDLPV---MNDAARTLSD 137 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ea--~~~----~~~~------~~kVaIIMGS~SDl~v---mekA~~vLee 137 (185)
-||+||-+-.| +=.++.+...+++++|+++- +.. .+.. +++ .+++|..|-.+. +++....|++
T Consensus 16 ~NvVas~~l~~-~ldL~~la~~~~n~eY~P~~fpgli~Rl~~Pk~t~lIF~SGK-iv~TGakS~e~a~~a~~~i~~~L~~ 93 (198)
T 1mp9_A 16 ENIVATVTLDQ-TLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGK-MVVTGAKSTDELIKAVKRIIKTLKK 93 (198)
T ss_dssp EEEEEEEECCS-CCCHHHHHHHSTTCBCCTTTCSSEEEEETTTTEEEEECTTSE-EEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCC-cccHHHHHhhCCCCEECCccccceEEEcCCCceEEEEeCCCe-EEEeccCCHHHHHHHHHHHHHHHHH
Confidence 47888888877 77788888888999998882 322 1111 122 467887776543 5566777899
Q ss_pred hCCCe----eEE----EEcCC-CCchHHHHHHHH
Q 029926 138 FGVPY----EIK----ILSPH-QNRKGALSYALS 162 (185)
Q Consensus 138 fGIpy----Evr----VaSAH-RtPe~l~ey~k~ 162 (185)
+|++. +++ |+|+. ..+=+|++++..
T Consensus 94 lG~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~ 127 (198)
T 1mp9_A 94 YGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFL 127 (198)
T ss_dssp TTCCCSSCCEEEEEEEEEEEECSSEECHHHHHHH
T ss_pred cCCcccCcCceEEEEEEEEeeCCCccCHHHHHhh
Confidence 99863 333 45533 445566666643
No 295
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=47.26 E-value=52 Score=32.23 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=43.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEc-------------CCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 122 DSDLPVMNDAARTLSDFGVPYEIKILS-------------PHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpyEvrVaS-------------AHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
..|.+.+.+..+-+++.|||+|+.++- ..|-|+ ..++++...+.|.++++-+
T Consensus 301 Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPd-p~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 301 YGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKG-FPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTT-HHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCceEEEccchhcCCCceeeChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 457888999999999999999999974 346675 8889999999999888743
No 296
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=47.16 E-value=1e+02 Score=24.15 Aligned_cols=64 Identities=17% Similarity=0.141 Sum_probs=43.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------CCCchHHHHHHHHHhh--CCCeEEEEec
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------HQNRKGALSYALSAKE--RGIKIIIVGD 175 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA--------------HRtPe~l~ey~k~ae~--~GikVIIAvA 175 (185)
+.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.++++...+ .+++++|-.|
T Consensus 7 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A 82 (264)
T 2dtx_A 7 RDKVVIVTGASM--GIGRAIAERFVDEGS--KVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA 82 (264)
T ss_dssp TTCEEEEESCSS--HHHHHHHHHHHHTTC--EEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 457899999987 567778888888775 3433321 1335667777665433 3689999999
Q ss_pred CccC
Q 029926 176 GVEA 179 (185)
Q Consensus 176 G~AA 179 (185)
|...
T Consensus 83 g~~~ 86 (264)
T 2dtx_A 83 GIES 86 (264)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9753
No 297
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=47.14 E-value=1e+02 Score=24.15 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=43.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------CCCchHHHHHHHHHhh--CCCeEEEE
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------HQNRKGALSYALSAKE--RGIKIIIV 173 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA----------------HRtPe~l~ey~k~ae~--~GikVIIA 173 (185)
+.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ .+++++|-
T Consensus 27 ~~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQ--GIGAGLVRAYRDRNYR--VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSS--HHHHHHHHHHHHTTCE--EEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 457999999987 5667788888877853 333321 1346667777765533 36999999
Q ss_pred ecCccC
Q 029926 174 GDGVEA 179 (185)
Q Consensus 174 vAG~AA 179 (185)
.||...
T Consensus 103 nAg~~~ 108 (260)
T 3un1_A 103 NAGVFL 108 (260)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 999753
No 298
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=46.95 E-value=55 Score=25.78 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=39.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC--------------------CCchHHHHHHHHHhh--CCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH--------------------QNRKGALSYALSAKE--RGI 168 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH--------------------RtPe~l~ey~k~ae~--~Gi 168 (185)
++.++++|+|..+- +...+++.|-+-|.. +.+++-. ..++.+.++++...+ .++
T Consensus 25 l~~k~vlVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 25 LSSAPILITGASQR--VGLHCALRLLEHGHR--VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp --CCCEEESSTTSH--HHHHHHHHHHHTTCC--EEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 45679999999874 567777888777753 3333211 123344455544332 368
Q ss_pred eEEEEecCcc
Q 029926 169 KIIIVGDGVE 178 (185)
Q Consensus 169 kVIIAvAG~A 178 (185)
+++|-.||..
T Consensus 101 D~lv~nAg~~ 110 (260)
T 3gem_A 101 RAVVHNASEW 110 (260)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcc
Confidence 9999999864
No 299
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=46.66 E-value=94 Score=23.67 Aligned_cols=62 Identities=5% Similarity=-0.041 Sum_probs=41.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------CCchHHHHHHHHHhh----CCCeEEEE
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------QNRKGALSYALSAKE----RGIKIIIV 173 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH---------------RtPe~l~ey~k~ae~----~GikVIIA 173 (185)
.++++|+|..+ -+...+++.|-+-|. ++.+++-. ..++.+.++++...+ .+++++|-
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~ 82 (241)
T 1dhr_A 7 ARRVLVYGGRG--ALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 82 (241)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCc--HHHHHHHHHHHhCCC--EEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46899999987 567788888888784 44443211 123455566554432 46899999
Q ss_pred ecCcc
Q 029926 174 GDGVE 178 (185)
Q Consensus 174 vAG~A 178 (185)
.||..
T Consensus 83 ~Ag~~ 87 (241)
T 1dhr_A 83 VAGGW 87 (241)
T ss_dssp CCCCC
T ss_pred ccccc
Confidence 99964
No 300
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=46.65 E-value=39 Score=27.88 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=37.9
Q ss_pred HHHHHHhCCCeeEEEEcCCCCc-hHHHHHHHHHhhCCCeEEEEec
Q 029926 132 ARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 132 ~~vLeefGIpyEvrVaSAHRtP-e~l~ey~k~ae~~GikVIIAvA 175 (185)
...|+++|++|-+-..|.+|.. .++.+.++.+.+.|.++++++-
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999999885 5788888999999999999873
No 301
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=46.56 E-value=46 Score=25.78 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=24.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-----CchHHHHHHHHH
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ-----NRKGALSYALSA 163 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHR-----tPe~l~ey~k~a 163 (185)
.|.+..|.....+.++++.+.+++.||..-+. .|. +++.+.++++..
T Consensus 100 ~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lE---n~~~~~~~~~~~~~~ll~~v 151 (264)
T 1yx1_A 100 WLKVSLGLLPEQPDLAALGRRLARHGLQLLVE---NDQTPQGGRIEVLERFFRLA 151 (264)
T ss_dssp EEEEEEECCCSSCCHHHHHHHHTTSSCEEEEE---CCSSHHHHCHHHHHHHHHHH
T ss_pred EEEEecCCCCcHHHHHHHHHHHHhcCCEEEEe---cCCCCCCCCHHHHHHHHHHH
Confidence 35555555443335566666666666644333 232 345555666554
No 302
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=46.49 E-value=88 Score=24.05 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=16.5
Q ss_pred CchHHHHHHHHHhh----CCCe--EEEEecCccC
Q 029926 152 NRKGALSYALSAKE----RGIK--IIIVGDGVEA 179 (185)
Q Consensus 152 tPe~l~ey~k~ae~----~Gik--VIIAvAG~AA 179 (185)
.++.+.++++...+ ..++ ++|-.||...
T Consensus 71 ~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~ 104 (259)
T 1oaa_A 71 TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLG 104 (259)
T ss_dssp SHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCC
T ss_pred CHHHHHHHHHHHHhccccccCCccEEEECCcccC
Confidence 34555555555543 2356 8888888643
No 303
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=46.41 E-value=92 Score=24.78 Aligned_cols=35 Identities=23% Similarity=0.145 Sum_probs=26.1
Q ss_pred CeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEE
Q 029926 113 PIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKIL 147 (185)
Q Consensus 113 ~kVaIIMGS~SD----l~vmekA~~vLeefGIpyEvrVa 147 (185)
++|.||.||..- ...++.+.+.|++-|.++++.=+
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 379999999875 46678888888888876555444
No 304
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=46.33 E-value=49 Score=26.96 Aligned_cols=29 Identities=17% Similarity=-0.028 Sum_probs=23.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVP 141 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIp 141 (185)
.+|+||+|..|+--+...++..|-+-|..
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~ 30 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK 30 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCE
Confidence 47999999887767788888888888853
No 305
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.33 E-value=1e+02 Score=23.89 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=19.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 9 ~gk~vlVTGas~--gIG~~ia~~l~~~G~ 35 (287)
T 3pxx_A 9 QDKVVLVTGGAR--GQGRSHAVKLAEEGA 35 (287)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 457899999887 456667777777674
No 306
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=46.23 E-value=32 Score=29.82 Aligned_cols=52 Identities=15% Similarity=0.229 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 123 SDLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
-|+.-+.+-.+-|+++||.. +. .|-+.-=++++++++++++.++|++||+=+
T Consensus 53 Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 53 GDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 57877777789999999962 22 233333468899999999999999999743
No 307
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=46.14 E-value=52 Score=32.31 Aligned_cols=52 Identities=17% Similarity=0.371 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEc-------------CCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 122 DSDLPVMNDAARTLSDFGVPYEIKILS-------------PHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpyEvrVaS-------------AHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
..|.+.+.+..+-+++.|||+|+.++. ..|-| ...++++...+.|.++++-+
T Consensus 329 Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FP-dp~~mv~~Lh~~G~k~vl~i 393 (898)
T 3lpp_A 329 YKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFN-GLPQFVQDLHDHGQKYVIIL 393 (898)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTT-THHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCceeeEeccccccCCCcceEChhhCC-CHHHHHHHHHHCCCEEEEEe
Confidence 357888999999999999999999984 34666 68889999999999887754
No 308
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=46.07 E-value=1.1e+02 Score=24.06 Aligned_cols=64 Identities=13% Similarity=0.062 Sum_probs=39.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCCchHHHHHHHHHhh--C
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKE--R 166 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA----------------------HRtPe~l~ey~k~ae~--~ 166 (185)
.+.++++|+|..+ -+...+++.|-+-|. .+.+++- -..++.+.++++...+ .
T Consensus 9 l~~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 9 LENKVAIITGACG--GIGLETSRVLARAGA--RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4467999999987 456677777777774 3333321 1223444445544322 3
Q ss_pred CCeEEEEecCcc
Q 029926 167 GIKIIIVGDGVE 178 (185)
Q Consensus 167 GikVIIAvAG~A 178 (185)
+++++|-.||..
T Consensus 85 ~id~lv~nAg~~ 96 (271)
T 3tzq_B 85 RLDIVDNNAAHS 96 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999999975
No 309
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=46.04 E-value=1e+02 Score=23.78 Aligned_cols=64 Identities=19% Similarity=0.124 Sum_probs=40.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCCchHHHHHHHHHhh--CC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKE--RG 167 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA----------------------HRtPe~l~ey~k~ae~--~G 167 (185)
+.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ .+
T Consensus 6 ~~k~~lVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 6 KSRVFIVTGASS--GLGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTCE--EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457999999987 4567777778777753 322221 1234455555554432 36
Q ss_pred CeEEEEecCccC
Q 029926 168 IKIIIVGDGVEA 179 (185)
Q Consensus 168 ikVIIAvAG~AA 179 (185)
++++|-.||...
T Consensus 82 id~lv~nAg~~~ 93 (257)
T 3tpc_A 82 VHGLVNCAGTAP 93 (257)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 899999999753
No 310
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=46.03 E-value=89 Score=24.22 Aligned_cols=35 Identities=3% Similarity=-0.040 Sum_probs=23.7
Q ss_pred CCCeEEEEeccCC--C----HHHHHHHHHHHHHh--CCCeeEE
Q 029926 111 DTPIVGIIMESDS--D----LPVMNDAARTLSDF--GVPYEIK 145 (185)
Q Consensus 111 ~~~kVaIIMGS~S--D----l~vmekA~~vLeef--GIpyEvr 145 (185)
|+++|.||.||.. + ...++.+.+.|++- |.++++.
T Consensus 3 mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~ 45 (211)
T 3p0r_A 3 AMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVEL 45 (211)
T ss_dssp -CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4568999999988 4 34566677777766 6655443
No 311
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=46.03 E-value=92 Score=24.97 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=18.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 32 l~~k~vlVTGas~--gIG~aia~~L~~~G~ 59 (291)
T 3cxt_A 32 LKGKIALVTGASY--GIGFAIASAYAKAGA 59 (291)
T ss_dssp CTTCEEEEETCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 3456888888876 345566666666663
No 312
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=45.92 E-value=92 Score=24.44 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=20.0
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
..+.++++|+|..+ -+...+++.|-+-|.
T Consensus 18 ~l~~k~~lVTGas~--gIG~~ia~~l~~~G~ 46 (267)
T 1vl8_A 18 DLRGRVALVTGGSR--GLGFGIAQGLAEAGC 46 (267)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 34557999999887 456666666666663
No 313
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=45.89 E-value=1e+02 Score=23.81 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=38.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCch------------------------HHHHHHHHHhh-
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe------------------------~l~ey~k~ae~- 165 (185)
++.++++|+|..+ -+...+++.|-+-|. . |+-..|+++ .+.++++...+
T Consensus 4 l~gk~vlVTGas~--gIG~a~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 4 LAGKTALVTGAAQ--GIGKAIAARLAADGA--T--VIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--E--EEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCC--HHHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3457899999887 455667777777664 2 222334444 44444443322
Q ss_pred -CCCeEEEEecCcc
Q 029926 166 -RGIKIIIVGDGVE 178 (185)
Q Consensus 166 -~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 78 ~g~id~lv~nAg~~ 91 (247)
T 3rwb_A 78 TGGIDILVNNASIV 91 (247)
T ss_dssp HSCCSEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 3689999999865
No 314
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=45.82 E-value=90 Score=25.67 Aligned_cols=28 Identities=18% Similarity=0.099 Sum_probs=16.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
|+.++++|+|..+- +...+++.|-+-|.
T Consensus 3 m~~k~vlVTGas~G--IG~aia~~L~~~G~ 30 (324)
T 3u9l_A 3 MSKKIILITGASSG--FGRLTAEALAGAGH 30 (324)
T ss_dssp --CCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcH--HHHHHHHHHHHCCC
Confidence 34568888887763 45556666666664
No 315
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=45.74 E-value=49 Score=26.99 Aligned_cols=55 Identities=11% Similarity=0.217 Sum_probs=40.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.+|+|+. ..+-.+ .+....+-||++.+.... .++++.++.++.+.++|++|||+.
T Consensus 107 ~kIavVg-~~~~~~---~~~~i~~ll~~~i~~~~~---~~~ee~~~~i~~l~~~G~~vVVG~ 161 (225)
T 2pju_A 107 SSIGVVT-YQETIP---ALVAFQKTFNLRLDQRSY---ITEEDARGQINELKANGTEAVVGA 161 (225)
T ss_dssp SCEEEEE-ESSCCH---HHHHHHHHHTCCEEEEEE---SSHHHHHHHHHHHHHTTCCEEEES
T ss_pred CcEEEEe-Cchhhh---HHHHHHHHhCCceEEEEe---CCHHHHHHHHHHHHHCCCCEEECC
Confidence 4788884 444433 444555667887666553 589999999999999999999885
No 316
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=45.71 E-value=57 Score=26.58 Aligned_cols=61 Identities=3% Similarity=0.070 Sum_probs=37.6
Q ss_pred CeEEEEe-----ccCCCH-HHHHHHHHHHHH-hCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIM-----ESDSDL-PVMNDAARTLSD-FGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIM-----GS~SDl-~vmekA~~vLee-fGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+||. .+++|. ..++...+.|.+ .|+.......- ......+..+++..++ +.+|||...
T Consensus 147 ~~v~ii~~~d~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~-~~~~~d~~~~l~~i~~-~~~viv~~~ 214 (435)
T 1dp4_A 147 EHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFV-EGDPDHYPKLLRAVRR-KGRVIYICS 214 (435)
T ss_dssp CSEEEEEEECCSSSCCHHHHHHHHHHHHHHHHHCCEEEEEEEC-TTCGGGHHHHHHHHHH-HCSEEEEES
T ss_pred cEEEEEEEccCCCCcchHHHHHHHHHHHHHhhcCeEEEEEEEe-cCchhhHHHHHHHHHh-hCceEEEec
Confidence 4699992 333333 245566677777 99987554432 2455666677766666 677777654
No 317
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=45.57 E-value=79 Score=30.35 Aligned_cols=98 Identities=16% Similarity=0.059 Sum_probs=63.2
Q ss_pred cchhhhhhhhhhhcCCCceeeeccCC----C----C-----------CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCC
Q 029926 81 GSATSTRKDYSSVREPSTVFEEENAN----G----D-----------STDTPIVGIIMESDSDLPVMNDAARTLSDFGVP 141 (185)
Q Consensus 81 ~~~~~~~~~~~~~~~p~~~~~~ea~~----~----~-----------~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIp 141 (185)
++..-.|...+.+..|++.+.--.+. . . ......+.=|..|.||++.++++.+.+.+.|..
T Consensus 160 ~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~ 239 (718)
T 3bg3_A 160 YECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGV 239 (718)
T ss_dssp CCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSE
T ss_pred CCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCe
Confidence 34445677777777787655422111 0 0 001122444557899999999999999999976
Q ss_pred eeEEEE------cCCC---CchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 142 YEIKIL------SPHQ---NRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 142 yEvrVa------SAHR---tPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+.-+. +++| +|+.+.++++.+.+-|++. |+++-+++
T Consensus 240 v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~-I~l~DT~G 285 (718)
T 3bg3_A 240 VEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHI-LCIKDMAG 285 (718)
T ss_dssp EEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSE-EEEECTTS
T ss_pred EEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCE-EEEcCcCC
Confidence 554442 5577 5899999999988888874 44444433
No 318
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=45.49 E-value=59 Score=25.83 Aligned_cols=60 Identities=12% Similarity=0.132 Sum_probs=48.3
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhC-CC---e-eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFG-VP---Y-EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefG-Ip---y-EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.| ++ + .++|=+|.=.|-....+++ ...++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 80 (156)
T 3nq4_A 13 ARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAK---SGKYDAVVALG 80 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHH---HCSCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999988 77889999999999 84 3 4568888888888877765 45588888753
No 319
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=45.36 E-value=30 Score=24.25 Aligned_cols=57 Identities=16% Similarity=0.080 Sum_probs=38.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH-hhCCCe-EEE
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGIK-III 172 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a-e~~Gik-VII 172 (185)
++.|.|.+ .+.=|.+++|.+.|++.||+|+..=+ -..|+...++.+.. ..+.+- |||
T Consensus 3 ta~I~vYs--~~~Cp~C~~aK~~L~~~gi~y~~idi--~~d~~~~~~~~~~~~G~~tVP~I~i 61 (92)
T 2lqo_A 3 TAALTIYT--TSWCGYCLRLKTALTANRIAYDEVDI--EHNRAAAEFVGSVNGGNRTVPTVKF 61 (92)
T ss_dssp SSCEEEEE--CTTCSSHHHHHHHHHHTTCCCEEEET--TTCHHHHHHHHHHSSSSSCSCEEEE
T ss_pred CCcEEEEc--CCCCHhHHHHHHHHHhcCCceEEEEc--CCCHHHHHHHHHHcCCCCEeCEEEE
Confidence 34455554 46678999999999999999975444 46788777776543 234454 444
No 320
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=45.23 E-value=48 Score=29.80 Aligned_cols=50 Identities=18% Similarity=0.318 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 124 DLPVMNDAARTLSDFGVPY------------------E-IKILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpy------------------E-vrVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
|+.-+.+-.+-|+++||.. + ..|-+..=+++++.++++++.++|++||+=
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 242 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLD 242 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 7777666679999999963 2 234444457899999999999999999974
No 321
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=45.21 E-value=46 Score=29.88 Aligned_cols=50 Identities=28% Similarity=0.274 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 124 DLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpy------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
|+.-+.+-.+-|+++||.. +. .|-+..=+++++.++++++.++|++||+=
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD 239 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILD 239 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 7766655679999999963 32 33344457999999999999999999974
No 322
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=45.11 E-value=72 Score=25.18 Aligned_cols=61 Identities=16% Similarity=0.243 Sum_probs=37.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCch------------------------HHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe------------------------~l~ey~k~ae~-- 165 (185)
+.++++|+|..+- +...+++.|-+-|. .+.+. -|+++ .+.++++...+
T Consensus 26 ~gk~vlVTGas~g--IG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 26 TGRKALVTGATGG--IGEAIARCFHAQGA--IVGLH--GTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TTCEEEESSTTSH--HHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4679999999874 55666677766664 22222 24444 44444443322
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 100 g~iD~lvnnAg~~ 112 (266)
T 3grp_A 100 EGIDILVNNAGIT 112 (266)
T ss_dssp TSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999988864
No 323
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=45.01 E-value=1.1e+02 Score=23.77 Aligned_cols=61 Identities=20% Similarity=0.103 Sum_probs=37.0
Q ss_pred eEEEEeccCCC-----HHHHHHHHHHHHH-------hCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 114 IVGIIMESDSD-----LPVMNDAARTLSD-------FGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 114 kVaIIMGS~SD-----l~vmekA~~vLee-------fGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
+|+++.-.... .+..+.+...+++ .|.++++.+....-.|+...+.++..-+++++.+|..
T Consensus 4 ~IG~~~p~~g~~~~~~~~~~~g~~~a~~~iN~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~ 76 (346)
T 1usg_A 4 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGH 76 (346)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEEEEeCCCCcchhcCHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEcC
Confidence 46666543222 1334444555565 5666677777777777777777766656677777743
No 324
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=44.99 E-value=57 Score=24.71 Aligned_cols=28 Identities=18% Similarity=0.133 Sum_probs=18.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 12 l~~k~vlITGas~--gIG~~ia~~l~~~G~ 39 (247)
T 3i1j_A 12 LKGRVILVTGAAR--GIGAAAARAYAAHGA 39 (247)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 4457888999877 344556666666563
No 325
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=44.73 E-value=1.1e+02 Score=24.52 Aligned_cols=65 Identities=20% Similarity=0.190 Sum_probs=38.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------------------CCchHHHHHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------------------QNRKGALSYALSA 163 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH---------------------------RtPe~l~ey~k~a 163 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+..-. ..++.+.++++..
T Consensus 47 l~~k~vlVTGas~--GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 47 LKDRKALVTGGDS--GIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3567999999877 445666666666664 23332221 2234444444433
Q ss_pred hh--CCCeEEEEecCccC
Q 029926 164 KE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 164 e~--~GikVIIAvAG~AA 179 (185)
.+ .+++++|-.||...
T Consensus 123 ~~~~g~iD~lv~nAg~~~ 140 (294)
T 3r3s_A 123 REALGGLDILALVAGKQT 140 (294)
T ss_dssp HHHHTCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCcC
Confidence 22 36899999998754
No 326
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=44.72 E-value=51 Score=24.78 Aligned_cols=57 Identities=12% Similarity=0.124 Sum_probs=43.4
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe--------------------eEEEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 116 GIIMESDSDLPVMNDAARTLSDFGVPY--------------------EIKILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 116 aIIMGS~SDl~vmekA~~vLeefGIpy--------------------EvrVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
.++.|.-+-...++.....|..+|++. -+-++|.-....++.+.++.++++|++|+.
T Consensus 48 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~ 124 (201)
T 3fxa_A 48 IVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIG 124 (201)
T ss_dssp EEEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEE
T ss_pred EEEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEE
Confidence 355566556889999999999999874 245667777778888888888888887653
No 327
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=44.70 E-value=98 Score=23.27 Aligned_cols=24 Identities=21% Similarity=0.066 Sum_probs=14.7
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
++++|+|..+ -+...+++.|-+-|
T Consensus 3 k~vlItGasg--giG~~~a~~l~~~G 26 (250)
T 2cfc_A 3 RVAIVTGASS--GNGLAIATRFLARG 26 (250)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHTT
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCC
Confidence 4667777765 34555666666555
No 328
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=44.66 E-value=84 Score=24.90 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=30.7
Q ss_pred HHHHHHhCCCeeEEEEcCCCCc-hHHHHHHHHHhhCCCeEEEEecC
Q 029926 132 ARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 132 ~~vLeefGIpyEvrVaSAHRtP-e~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+.+.++|+++-+-..|=+|.| +++.++++.+.+.|.++++.+.-
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~ 120 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNN 120 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4666777876544323322564 57888888888889999888754
No 329
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=44.56 E-value=77 Score=25.77 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHH-hCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 124 DLPVMNDAARTLSD-FGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 124 Dl~vmekA~~vLee-fGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
|.+.+.+..+.+++ .++|.-+++. +.-+++++.++++.+++.|++.|++..
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~-~~~~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLP-PYFDLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEEC-CCCSHHHHHHHHHHHTTSCCCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEC-CCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 44444444444433 3566666643 333555666666666666776666543
No 330
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=44.40 E-value=1.1e+02 Score=23.60 Aligned_cols=65 Identities=5% Similarity=0.005 Sum_probs=43.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC---------------CCCchHHHHHHHHHhh--CCCeEEEE
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP---------------HQNRKGALSYALSAKE--RGIKIIIV 173 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA---------------HRtPe~l~ey~k~ae~--~GikVIIA 173 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.+.++...+ .+++++|-
T Consensus 5 l~~k~vlVTGas~--giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGK--GIGYATALAFVEAGA--KVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3457999999987 566778888877774 3433321 1335667777665433 36899999
Q ss_pred ecCccC
Q 029926 174 GDGVEA 179 (185)
Q Consensus 174 vAG~AA 179 (185)
.||...
T Consensus 81 ~Ag~~~ 86 (250)
T 2fwm_X 81 AAGILR 86 (250)
T ss_dssp CCCCCC
T ss_pred CCCcCC
Confidence 999743
No 331
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=44.37 E-value=1.1e+02 Score=23.89 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=17.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 10 ~~k~vlVTGas~--gIG~aia~~l~~~G~ 36 (281)
T 3svt_A 10 QDRTYLVTGGGS--GIGKGVAAGLVAAGA 36 (281)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 356888888876 344555566655553
No 332
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=44.29 E-value=50 Score=26.27 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=42.0
Q ss_pred CCCeEEEEeccCC------CHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 111 DTPIVGIIMESDS------DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 111 ~~~kVaIIMGS~S------Dl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
.+++|+||+=|+. |- -..-....|+++|+......+ .--.++.+.+-++++-+.+++++|.-.|.+.
T Consensus 29 ~~~rvaIistGdEl~~G~~Ds-n~~~L~~~L~~~G~~v~~~~i-v~Dd~~~I~~al~~a~~~~~DlVIttGGts~ 101 (185)
T 3rfq_A 29 VVGRALVVVVDDRTAHGDEDH-SGPLVTELLTEAGFVVDGVVA-VEADEVDIRNALNTAVIGGVDLVVSVGGTGV 101 (185)
T ss_dssp CCEEEEEEEECHHHHTTCCCS-HHHHHHHHHHHTTEEEEEEEE-ECSCHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CCCEEEEEEECcccCCCCcCc-HHHHHHHHHHHCCCEEEEEEE-eCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 3568999875532 22 234567788999976432222 2345666666666554456899999888764
No 333
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=44.12 E-value=15 Score=31.13 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=29.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh-CCCeeEEEEcCCC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDF-GVPYEIKILSPHQ 151 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeef-GIpyEvrVaSAHR 151 (185)
.+|++|+|..++.-.+....+.|++- ++++.+-+.+-|+
T Consensus 26 ~ki~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~ 65 (396)
T 3dzc_A 26 KKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHR 65 (396)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSS
T ss_pred CeEEEEEeccHhHHHHHHHHHHHHhCCCCcEEEEEecccH
Confidence 47888888888888888888888775 5555566666776
No 334
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=43.97 E-value=40 Score=29.14 Aligned_cols=52 Identities=21% Similarity=0.249 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCe-----------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 122 DSDLPVMNDAARTLSDFGVPY-----------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpy-----------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
.-|+.-+.+-.+-|+++||.. +. .|-...=++++++++++++.++|++||+=
T Consensus 32 ~Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD 101 (424)
T 2dh2_A 32 AGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILD 101 (424)
T ss_dssp CCSHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 358888777788999999962 22 34444457899999999999999999974
No 335
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=43.96 E-value=1e+02 Score=23.93 Aligned_cols=28 Identities=25% Similarity=0.100 Sum_probs=17.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 11 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 38 (267)
T 1iy8_A 11 FTDRVVLITGGGS--GLGRATAVRLAAEGA 38 (267)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 3456888888876 345555666655553
No 336
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=43.89 E-value=75 Score=29.88 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=43.6
Q ss_pred cCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 121 SDSDLPVMNDAARTLSDFGVPYEIKILSP-------------HQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 121 S~SDl~vmekA~~vLeefGIpyEvrVaSA-------------HRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
+.-|.+.+.+.++-+++.|||+|+-++-. +|-|+ ..+++++..++|.++++-+
T Consensus 185 ~y~~~~ev~~v~~~~~~~~IP~dvi~lD~~y~~~~~dft~d~~~FPd-p~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 185 SYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPE-PKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp TCCSHHHHHHHHHHHHHTTCCEEEEEECGGGSBTTBTTCCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCCcceEEEecceecCCccceEChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 34578888899999999999999999863 46666 6889999999999888755
No 337
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=43.87 E-value=96 Score=24.40 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=19.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 21 l~~k~~lVTGas~--gIG~aia~~L~~~G~ 48 (288)
T 2x9g_A 21 MEAPAAVVTGAAK--RIGRAIAVKLHQTGY 48 (288)
T ss_dssp -CCCEEEETTCSS--HHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 4557999999887 456667777766674
No 338
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=43.79 E-value=91 Score=23.68 Aligned_cols=63 Identities=16% Similarity=0.228 Sum_probs=40.4
Q ss_pred CCeEEEEeccCCCHHH---HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh---CCCeEEEEecC
Q 029926 112 TPIVGIIMESDSDLPV---MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE---RGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~v---mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~---~GikVIIAvAG 176 (185)
..+|++|.|..++... .+.-.+.|++.|++++ +....-+++...+.+++.-+ ..++.|++...
T Consensus 118 ~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d 186 (277)
T 3cs3_A 118 SKKVLLLSGPEKGYDSQERLAVSTRELTRFGIPYE--IIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFND 186 (277)
T ss_dssp CSCEEEEECCTTSHHHHHHHHHHHHHHHHTTCCEE--EEECCSSHHHHHHHHHHHTTSCCCSSEEEEESSH
T ss_pred CceEEEEeCCccCccHHHHHHHHHHHHHHcCCCee--EEeCCCChhHHHHHHHHHHhcCCCCCcEEEEcCh
Confidence 3579999998665433 4455677889999877 44444456655555544422 35788888654
No 339
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=43.63 E-value=1.1e+02 Score=23.71 Aligned_cols=63 Identities=11% Similarity=0.040 Sum_probs=35.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--------------------------cCCCCchHHHHHHHHHhh
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL--------------------------SPHQNRKGALSYALSAKE 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVa--------------------------SAHRtPe~l~ey~k~ae~ 165 (185)
+.++++|+|..+ -+...+++.|-+-|.. +.++ .=-..++.+.+++++..+
T Consensus 7 ~~k~vlVTGas~--GIG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 7 TNRTIVVAGAGR--DIGRACAIRFAQEGAN--VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTCE--EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356788888776 3455566666665642 2222 111334555555554433
Q ss_pred --CCCeEEEEecCcc
Q 029926 166 --RGIKIIIVGDGVE 178 (185)
Q Consensus 166 --~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 83 ~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 83 KFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHCSEEEEEECCCCC
T ss_pred HhCCCCEEEECCCcc
Confidence 2578888888854
No 340
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=43.62 E-value=1e+02 Score=23.80 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=15.8
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 152 NRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 152 tPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
.++.+.++++...+ .+++++|-.||..
T Consensus 64 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 92 (258)
T 3a28_C 64 DKANFDSAIDEAAEKLGGFDVLVNNAGIA 92 (258)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 34444444443322 3588999888864
No 341
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=43.51 E-value=1.1e+02 Score=23.60 Aligned_cols=27 Identities=11% Similarity=0.225 Sum_probs=18.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 11 ~~k~vlITGas~--GIG~~~a~~L~~~G~ 37 (311)
T 3o26_A 11 KRRCAVVTGGNK--GIGFEICKQLSSNGI 37 (311)
T ss_dssp -CCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCcEEEEecCCc--hHHHHHHHHHHHCCC
Confidence 457899999876 455666666666664
No 342
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=43.50 E-value=1e+02 Score=23.81 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=37.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc------------------------hHHHHHHHHHhh-
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP------------------------e~l~ey~k~ae~- 165 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|++ +.+.++++...+
T Consensus 3 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 3 LSGKTVIITGGAR--GLGAEAARQAVAAGA--RVVLA--DVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCSEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 3456888999877 455666777766664 23222 3443 344444443322
Q ss_pred -CCCeEEEEecCccC
Q 029926 166 -RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 -~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 77 ~g~iD~lv~nAg~~~ 91 (254)
T 1hdc_A 77 FGSVDGLVNNAGIST 91 (254)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 26899999998653
No 343
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=43.36 E-value=1.1e+02 Score=23.55 Aligned_cols=25 Identities=24% Similarity=0.206 Sum_probs=14.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
.++++|+|..+ -+...+++.|-+-|
T Consensus 4 ~k~vlVTGas~--gIG~~ia~~l~~~G 28 (260)
T 1x1t_A 4 GKVAVVTGSTS--GIGLGIATALAAQG 28 (260)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHcC
Confidence 45677777765 34555555555555
No 344
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.25 E-value=1.1e+02 Score=24.44 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=25.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS 158 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~e 158 (185)
+.++++|+|..+ -+...+++.|-+-|. ++.+ ..|+++++.+
T Consensus 25 ~~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~--~~r~~~~~~~ 65 (297)
T 1xhl_A 25 SGKSVIITGSSN--GIGRSAAVIFAKEGA--QVTI--TGRNEDRLEE 65 (297)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 457899999877 456667777766664 3322 3455554443
No 345
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=43.23 E-value=1.1e+02 Score=23.28 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=38.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCCchHHHHHHHHHhh--C
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKE--R 166 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA----------------------HRtPe~l~ey~k~ae~--~ 166 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- ...++.+.+.++...+ .
T Consensus 10 ~~~k~vlVTGasg--giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 10 VKGLVAVITGGAS--GLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG 85 (265)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCC--hHHHHHHHHHHHCCC--EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4457889999876 456667777766664 3333221 1223445555544332 3
Q ss_pred CCeEEEEecCccC
Q 029926 167 GIKIIIVGDGVEA 179 (185)
Q Consensus 167 GikVIIAvAG~AA 179 (185)
+++++|-.||...
T Consensus 86 ~id~li~~Ag~~~ 98 (265)
T 2o23_A 86 RVDVAVNCAGIAV 98 (265)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 6899999998753
No 346
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=43.20 E-value=45 Score=30.26 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 124 DLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpy------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
|+.=+.+=.+-|++|||.. +. .|-+.-=++++++++++++.++|++||+=
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD 305 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILD 305 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEE
Confidence 6776666678999999963 22 23334457999999999999999999974
No 347
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=43.10 E-value=54 Score=25.53 Aligned_cols=61 Identities=10% Similarity=0.042 Sum_probs=36.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCch------------------------HHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe------------------------~l~ey~k~ae~-- 165 (185)
+.++++|+|..+ -+...+++.|-+-|. .+.+ ..|.++ .+.+++++..+
T Consensus 4 ~~k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (281)
T 3m1a_A 4 SAKVWLVTGASS--GFGRAIAEAAVAAGD--TVIG--TARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARY 77 (281)
T ss_dssp CCCEEEETTTTS--HHHHHHHHHHHHTTC--EEEE--EESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 357899999987 455667777777774 3322 234443 34444433321
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 78 g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 78 GRVDVLVNNAGRT 90 (281)
T ss_dssp SCCSEEEECCCCE
T ss_pred CCCCEEEECCCcC
Confidence 3689999999864
No 348
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=43.02 E-value=44 Score=29.13 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=48.9
Q ss_pred eeeeccccchhhhhhhhhhhcC-CCceeeeccCCCCCC---CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEE
Q 029926 74 PVLASSNGSATSTRKDYSSVRE-PSTVFEEENANGDST---DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIK 145 (185)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~ea~~~~~~---~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvr 145 (185)
=|+.+.|.|- ++|+.-+.+.. +.+.+++.+.++++. ....|+|-.|-..=-..++++.+.|+++.....+.
T Consensus 214 iVVGg~nSSN-T~rL~eia~~~~~~ty~Ie~~~el~~~wl~~~~~VGITAGASTP~~li~eVi~~l~~~~~~~~~~ 288 (297)
T 3dnf_A 214 IIIGGKNSGN-TRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEICEGQLVS 288 (297)
T ss_dssp EEESCTTCHH-HHHHHHHHHHHCSSEEEESSGGGCCGGGGTTCSEEEEEECTTCCHHHHHHHHHHHHHC-------
T ss_pred EEECCCCCch-hHHHHHHHHhcCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHHHHHHHHhccCCeec
Confidence 3455555554 78888887665 678888888888522 34579999998888889999999999987654443
No 349
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=42.99 E-value=1.1e+02 Score=24.28 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=27.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 159 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey 159 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ -|+++.+.+.
T Consensus 27 l~~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~~--~r~~~~~~~~ 69 (276)
T 2b4q_A 27 LAGRIALVTGGSR--GIGQMIAQGLLEAGA--RVFIC--ARDAEACADT 69 (276)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--CSCHHHHHHH
T ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHH
Confidence 3457999999977 556777777777774 33333 4665554443
No 350
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=42.96 E-value=1.3e+02 Score=24.16 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=43.3
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh-------CCCeeEEEEcCCCCchHHHHHHHHHhh-CCCeEEEEecC
Q 029926 113 PIVGIIMESDSD-----LPVMNDAARTLSDF-------GVPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIMGS~SD-----l~vmekA~~vLeef-------GIpyEvrVaSAHRtPe~l~ey~k~ae~-~GikVIIAvAG 176 (185)
.+|+++.-.... .+..+.+...+++. |.++++.+....-.|+...+.++..-+ ++++.||...+
T Consensus 8 ~~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~N~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~ 84 (385)
T 1pea_A 8 PLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYM 84 (385)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHTTTTBTTBCCEEEEECCTTCHHHHHHHHHHHHHTTCCCEEEECCS
T ss_pred eEEEEEECCCCcchhcCHHHHHHHHHHHHHhccccCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhhCCcEEEECCCc
Confidence 468888754322 23445555666775 777788888878888888887777654 77888887543
No 351
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=42.94 E-value=1.1e+02 Score=25.32 Aligned_cols=60 Identities=13% Similarity=0.196 Sum_probs=43.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh-------------CCCeEEEEe--cCcc
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE-------------RGIKIIIVG--DGVE 178 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~-------------~GikVIIAv--AG~A 178 (185)
+.++|.|+- ...+.+...|.+.|+. ++.| +-|++++.+++++.... .+++++|.. +|+.
T Consensus 121 k~~lvlGaG---g~~~aia~~L~~~G~~-~v~i--~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 121 RRVLLLGAG---GAVRGALLPFLQAGPS-ELVI--ANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp SEEEEECCS---HHHHHHHHHHHHTCCS-EEEE--ECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CEEEEECcc---HHHHHHHHHHHHcCCC-EEEE--EeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 466677874 6788899999999975 4555 46999999998876432 568899876 4554
Q ss_pred C
Q 029926 179 A 179 (185)
Q Consensus 179 A 179 (185)
.
T Consensus 195 ~ 195 (272)
T 3pwz_A 195 A 195 (272)
T ss_dssp T
T ss_pred C
Confidence 3
No 352
>2d0o_B DIOL dehydratase-reactivating factor small subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.51.3.2 PDB: 2d0p_B
Probab=42.91 E-value=54 Score=25.28 Aligned_cols=61 Identities=15% Similarity=0.278 Sum_probs=44.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHH-HhhCCCeEEEEecC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALS-AKERGIKIIIVGDG 176 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~-ae~~GikVIIAvAG 176 (185)
.+|-|.|......+ .+.+++..-+++=||||.+++.. ...+...+.. +...+..|=|++.+
T Consensus 6 ~kPaI~i~~~~~~~-~~l~evl~GIEEEGip~~v~~~~----~~d~~~lA~~AA~~S~LgVGIGi~~ 67 (125)
T 2d0o_B 6 SAPAIAIAVIDGCD-GLWREVLLGIEEEGIPFRLQHHP----AGEVVDSAWQAARSSPLLVGIACDR 67 (125)
T ss_dssp CCCCEEEEEETTCG-GGGHHHHHHHHHTTCCEEEEEES----SCCHHHHHHHHHHTCTTSEEEEECS
T ss_pred CCCEEEEEeCCCcH-HHHHHHHhhhcccCCCeEEEecC----CCCHHHHHHHHHHhCCCceeEEECC
Confidence 35668888755544 78999999999999999988742 2556666644 45667788888864
No 353
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=42.73 E-value=61 Score=24.81 Aligned_cols=58 Identities=9% Similarity=-0.027 Sum_probs=32.1
Q ss_pred eEEEEeccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCC-----------------CchHHHHHHHHHhhCCCeEEE
Q 029926 114 IVGIIMESDSDL----PVMNDAARTLSDFGVPYEIKILSPHQ-----------------NRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 114 kVaIIMGS~SDl----~vmekA~~vLeefGIpyEvrVaSAHR-----------------tPe~l~ey~k~ae~~GikVII 172 (185)
+|.||.||...- ..++.+.+.| +-|.++++.=+.... .++++.++.+...+ +++||
T Consensus 2 kiLiI~gspr~~s~t~~l~~~~~~~~-~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~--AD~iV 78 (196)
T 3lcm_A 2 KILIVYTHPNPTSFNAEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTW--ADHLI 78 (196)
T ss_dssp EEEEEECCSCTTSHHHHHHHHHHHHS-CTTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHH--CSEEE
T ss_pred EEEEEEeCCCCCChHHHHHHHHHHHh-cCCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHh--CCEEE
Confidence 699999998753 3344444444 345544433333221 13567777777766 45555
Q ss_pred Ee
Q 029926 173 VG 174 (185)
Q Consensus 173 Av 174 (185)
-+
T Consensus 79 ~~ 80 (196)
T 3lcm_A 79 FI 80 (196)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 354
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=42.68 E-value=1e+02 Score=24.05 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=17.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+- +...+++.|-+-|.
T Consensus 19 ~~k~vlVTGas~g--IG~aia~~l~~~G~ 45 (266)
T 4egf_A 19 DGKRALITGATKG--IGADIARAFAAAGA 45 (266)
T ss_dssp TTCEEEETTTTSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 4568888888763 45555556655553
No 355
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=42.62 E-value=78 Score=25.15 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=37.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc------------------------hHHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP------------------------e~l~ey~k~ae~-- 165 (185)
+.++++|+|..+ -+...+++.|-+-|. .+.+ .-|++ +.+.++++...+
T Consensus 27 ~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 27 GKKIAIVTGAGS--GVGRAVAVALAGAGY--GVAL--AGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp -CCEEEETTTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 457999999887 455666677766674 2222 23444 444444443322
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 101 g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 101 GRVDVLFNNAGTG 113 (272)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999999975
No 356
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=42.54 E-value=1.2e+02 Score=23.68 Aligned_cols=28 Identities=18% Similarity=0.062 Sum_probs=18.5
Q ss_pred CCchHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 151 QNRKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 151 RtPe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
..++.+.++++...+ .+++++|-.||..
T Consensus 73 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 73 SNEEEVAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp CSHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 456666666655433 3578888888864
No 357
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=42.49 E-value=1.3e+02 Score=25.09 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=38.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------------CCCCchHHHHH
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS--------------------------------PHQNRKGALSY 159 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS--------------------------------AHRtPe~l~ey 159 (185)
+.++++|+|..+ -+...++..|-+-|. .+.+++ =-+.++.+.++
T Consensus 44 ~gk~vlVTGas~--GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 44 AGCTVFITGASR--GIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCh--HHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 457888888876 455666666666664 222222 12345556666
Q ss_pred HHHHhh--CCCeEEEEecCcc
Q 029926 160 ALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 160 ~k~ae~--~GikVIIAvAG~A 178 (185)
++...+ .+++++|-.||..
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 655543 3689999999864
No 358
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=42.37 E-value=19 Score=26.40 Aligned_cols=47 Identities=13% Similarity=0.172 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCC-CCchHHHHHHHHHhhCCCeEEEEe
Q 029926 128 MNDAARTLSDFGVPYEIKILSPH-QNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 128 mekA~~vLeefGIpyEvrVaSAH-RtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.+++.+.|++.||+|+..-...- ++-+++.++..--.++-+|-++.-
T Consensus 2 ~~~~~~~L~~~~i~~~~~~~p~~~~t~~~~a~~lg~~~~~~~Ktlv~~ 49 (152)
T 1wdv_A 2 LEKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIVL 49 (152)
T ss_dssp -CHHHHHHHHHTCCCEEEECSSCCSSHHHHHHHHTSCGGGBEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEcCCCCCCHHHHHHHcCCCHHHeEEEEEEE
Confidence 46789999999999988766555 677777776643334434544443
No 359
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=42.27 E-value=48 Score=24.17 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=31.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN 152 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt 152 (185)
.+|+|+.....+..-+-...++|+.-| |++.++|.+..
T Consensus 3 ~ki~il~~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~ 40 (168)
T 3l18_A 3 MKVLFLSADGFEDLELIYPLHRIKEEG--HEVYVASFQRG 40 (168)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTT--CEEEEEESSSE
T ss_pred cEEEEEeCCCccHHHHHHHHHHHHHCC--CEEEEEECCCC
Confidence 479999999888888888889998876 68888887764
No 360
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=42.20 E-value=40 Score=26.74 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=43.6
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe---eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY---EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpy---EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|-=.|-...++++ ...++.+||..
T Consensus 14 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 79 (156)
T 1c2y_A 14 FRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGK---SGKYHAIVCLG 79 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHH---TTCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 4799999998888 77889999999999852 3445555555555544443 45689988853
No 361
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=42.09 E-value=1e+02 Score=24.88 Aligned_cols=44 Identities=7% Similarity=0.075 Sum_probs=28.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 160 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~ 160 (185)
.+.++++|+|..+ -+...+++.|-+-|. .+.++ -|+++++.+..
T Consensus 39 l~~k~vlVTGas~--GIG~aia~~la~~G~--~V~~~--~r~~~~~~~~~ 82 (293)
T 3rih_A 39 LSARSVLVTGGTK--GIGRGIATVFARAGA--NVAVA--ARSPRELSSVT 82 (293)
T ss_dssp CTTCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEE--ESSGGGGHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHH
Confidence 3467999999987 456777777777775 33333 35554444433
No 362
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=42.08 E-value=90 Score=27.01 Aligned_cols=53 Identities=8% Similarity=0.001 Sum_probs=44.2
Q ss_pred eEEEEeccCC-CHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC
Q 029926 114 IVGIIMESDS-DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 166 (185)
Q Consensus 114 kVaIIMGS~S-Dl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~ 166 (185)
...|+.|.+. +..+++.-.+.++++||.++.....+.-+.+++.+.++...++
T Consensus 40 Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 93 (300)
T 4a26_A 40 LASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNND 93 (300)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5677777653 3566888889999999999999999999999999999887554
No 363
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=42.00 E-value=81 Score=26.58 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=43.3
Q ss_pred EEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEcCC------C-CchHHHHHHHHHhhCCCeEEE
Q 029926 115 VGIIMESDSDL--------------PVMNDAARTLSDFGVPYEIKILSPH------Q-NRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 115 VaIIMGS~SDl--------------~vmekA~~vLeefGIpyEvrVaSAH------R-tPe~l~ey~k~ae~~GikVII 172 (185)
+.-|..|.||. +.++++.+.+++.|...+..+.-+. | +|+.+.++++.+.+-|++.|-
T Consensus 97 ~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 97 EACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 33444588885 6778889999999998777666542 2 578999999988888886543
No 364
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=41.96 E-value=1.1e+02 Score=22.94 Aligned_cols=36 Identities=11% Similarity=0.126 Sum_probs=23.1
Q ss_pred CeEEEEeccCCC------HHHHHHHHHHHHHhCCCeeEEEEc
Q 029926 113 PIVGIIMESDSD------LPVMNDAARTLSDFGVPYEIKILS 148 (185)
Q Consensus 113 ~kVaIIMGS~SD------l~vmekA~~vLeefGIpyEvrVaS 148 (185)
++|.||.||..- ...++.+.+.|++-|-..++.++.
T Consensus 2 ~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~d 43 (208)
T 2hpv_A 2 SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILD 43 (208)
T ss_dssp CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 379999999872 233566777777777223444443
No 365
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=41.94 E-value=84 Score=24.35 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=15.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFG 139 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefG 139 (185)
|+.++++|+|..+ -+...+++.|-+-|
T Consensus 9 ~~~k~~lVTGas~--gIG~~ia~~l~~~G 35 (276)
T 1mxh_A 9 SECPAAVITGGAR--RIGHSIAVRLHQQG 35 (276)
T ss_dssp --CCEEEETTCSS--HHHHHHHHHHHHTT
T ss_pred cCCCEEEEeCCCc--HHHHHHHHHHHHCC
Confidence 3446777777765 34555666665555
No 366
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=41.93 E-value=58 Score=26.11 Aligned_cols=67 Identities=9% Similarity=0.100 Sum_probs=42.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCCchHHHHHHHHHhh-
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS------------------------PHQNRKGALSYALSAKE- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS------------------------AHRtPe~l~ey~k~ae~- 165 (185)
++.++++|+|..|..-+...+++.|-+-|.. +-+++ =-..++.+.++++...+
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAE--VALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3568999999988556677777777777753 22221 12334555555554432
Q ss_pred -CCCeEEEEecCccC
Q 029926 166 -RGIKIIIVGDGVEA 179 (185)
Q Consensus 166 -~GikVIIAvAG~AA 179 (185)
.+++++|-.||...
T Consensus 106 ~g~iD~lVnnAG~~~ 120 (296)
T 3k31_A 106 WGSLDFVVHAVAFSD 120 (296)
T ss_dssp HSCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 36899999998753
No 367
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=41.91 E-value=1.2e+02 Score=23.62 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=18.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 9 l~~k~~lVTGas~--GIG~a~a~~la~~G~ 36 (277)
T 3tsc_A 9 LEGRVAFITGAAR--GQGRAHAVRMAAEGA 36 (277)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCcc--HHHHHHHHHHHHcCC
Confidence 3457888888877 345566666666664
No 368
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=41.85 E-value=1.2e+02 Score=23.55 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=37.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchH------------------------HHHHHHHHhh-
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKG------------------------ALSYALSAKE- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~------------------------l~ey~k~ae~- 165 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+ ..|+++. +.+.++...+
T Consensus 5 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 5 LTGKVALVSGGAR--GMGASHVRAMVAEGA--KVVF--GDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHH
Confidence 3457889999887 456667777776674 3333 2344443 3344433322
Q ss_pred -CCCeEEEEecCcc
Q 029926 166 -RGIKIIIVGDGVE 178 (185)
Q Consensus 166 -~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 79 ~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 79 FGGLHVLVNNAGIL 92 (260)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2689999999864
No 369
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=41.75 E-value=24 Score=25.33 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCC-CCchHHHHHHHH
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSPH-QNRKGALSYALS 162 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSAH-RtPe~l~ey~k~ 162 (185)
+.=+.+++|...|++.||+|+.+=+..+ -+.+++.++.+.
T Consensus 13 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~ 53 (120)
T 2kok_A 13 KNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKT 53 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHH
Confidence 3448999999999999999987755533 344777777753
No 370
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=41.58 E-value=1.2e+02 Score=23.57 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=18.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 16 l~~k~~lVTGas~--gIG~aia~~l~~~G~ 43 (270)
T 3is3_A 16 LDGKVALVTGSGR--GIGAAVAVHLGRLGA 43 (270)
T ss_dssp CTTCEEEESCTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 4457888888876 345556666666664
No 371
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=41.57 E-value=1.3e+02 Score=23.62 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=30.6
Q ss_pred hCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 138 FGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 138 fGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.|.++++.+....-.|+...+.++..-+++++.+|...+
T Consensus 40 ~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~ 78 (356)
T 3ipc_A 40 NGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHAN 78 (356)
T ss_dssp TTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHCCCcEEEcCCC
Confidence 356788888888888988888887776788888886543
No 372
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=41.53 E-value=68 Score=24.12 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH
Q 029926 128 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA 163 (185)
Q Consensus 128 mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a 163 (185)
...|...|+..||+|+..=++ ..|+...++.+.+
T Consensus 19 c~~aK~lL~~kgV~feEidI~--~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 19 QQDVLGFLEANKIGFEEKDIA--ANEENRKWMRENV 52 (121)
T ss_dssp HHHHHHHHHHTTCCEEEEECT--TCHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHhc
Confidence 479999999999999776666 4678777777765
No 373
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=41.26 E-value=49 Score=29.23 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=50.5
Q ss_pred eeeeeccccchhhhhhhhhhhcC-CCceeeeccCCCCC---CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 73 IPVLASSNGSATSTRKDYSSVRE-PSTVFEEENANGDS---TDTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~ea~~~~~---~~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+=|+.+.|.|- ++|+.-+.+.. +.+.+++.+.+++. .....|+|..|-..=-..++++.+.|+++|-
T Consensus 229 miVVGg~nSSN-T~rL~eia~~~g~~ty~Ie~~~el~~~wl~g~~~VGITAGASTP~~lieeVi~~l~~~~~ 299 (328)
T 3szu_A 229 VLVVGSKNSSN-SNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGG 299 (328)
T ss_dssp EEEECCTTCHH-HHHHHHHHHHTTCEEEEESSGGGCCHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCCCch-HHHHHHHHHHhCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHHHHHHHHhCC
Confidence 34555555554 78888887766 56888888888851 2334799999988888889999999999874
No 374
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=41.02 E-value=57 Score=24.78 Aligned_cols=42 Identities=7% Similarity=0.184 Sum_probs=32.3
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 153 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP 153 (185)
.++.+|+|+.....+..-+-...++|+.-| |++.++|.+..|
T Consensus 21 ~~~~kV~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 62 (193)
T 1oi4_A 21 GLSKKIAVLITDEFEDSEFTSPADEFRKAG--HEVITIEKQAGK 62 (193)
T ss_dssp TCCCEEEEECCTTBCTHHHHHHHHHHHHTT--CEEEEEESSTTC
T ss_pred ccCCEEEEEECCCCCHHHHHHHHHHHHHCC--CEEEEEECCCCc
Confidence 345689999987766666667788888877 688999988765
No 375
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=41.01 E-value=1.2e+02 Score=23.39 Aligned_cols=66 Identities=15% Similarity=0.074 Sum_probs=0.0
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 109 STDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
+.++.++++|+|..+ -+...+++.|-+-|... ++-..|.++.+.+..+..++.+.++.+..+-.+.
T Consensus 22 ~~l~~k~vlVTGas~--gIG~~la~~l~~~G~~v---~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~ 87 (267)
T 4iiu_A 22 SNAMSRSVLVTGASK--GIGRAIARQLAADGFNI---GVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN 87 (267)
T ss_dssp ---CCCEEEETTTTS--HHHHHHHHHHHHTTCEE---EEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred cccCCCEEEEECCCC--hHHHHHHHHHHHCCCEE---EEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC
No 376
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=40.97 E-value=1.2e+02 Score=23.28 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=35.7
Q ss_pred CCCeEEEEeccC-CCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------CCCCchHHHHHHHHH
Q 029926 111 DTPIVGIIMESD-SDLPVMNDAARTLSDFGVPYEIKILS--------------------------PHQNRKGALSYALSA 163 (185)
Q Consensus 111 ~~~kVaIIMGS~-SDl~vmekA~~vLeefGIpyEvrVaS--------------------------AHRtPe~l~ey~k~a 163 (185)
++.++++|+|.. +.+ ...+++.|-+-|.. +.+++ =-..++.+.+++++.
T Consensus 20 l~~k~vlITGasg~GI--G~~~a~~l~~~G~~--V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGI--GSTTARRALLEGAD--VVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTCEEEESSCSSSSH--HHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCch--HHHHHHHHHHCCCE--EEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 456789999985 433 44444555444532 22211 123455555555544
Q ss_pred hh--CCCeEEEEecCccC
Q 029926 164 KE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 164 e~--~GikVIIAvAG~AA 179 (185)
.+ ..++++|-.||...
T Consensus 96 ~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCCcEEEECCCcCC
Confidence 32 35789998888643
No 377
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=40.90 E-value=63 Score=28.77 Aligned_cols=51 Identities=12% Similarity=0.270 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. +. .|-+..=++++++++++.+.++|++||+=
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 99 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVD 99 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57877777778999999952 33 24445567899999999999999999873
No 378
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=40.88 E-value=54 Score=29.36 Aligned_cols=51 Identities=16% Similarity=0.245 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eEE-EEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------------------EIK-ILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------------------Evr-VaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. +.. |-+..=++++++++++++.++|++||+=
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 112 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMID 112 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 58887777779999999952 332 4444457899999999999999999974
No 379
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=40.87 E-value=70 Score=23.50 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=24.6
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029926 113 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQ 151 (185)
Q Consensus 113 ~kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVaSAHR 151 (185)
.+|.||.||..- ...++.+.+.|++-|+ ++.++....
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~--~v~~~~l~~ 44 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGF--EARVRTVPA 44 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTC--EEEEEBCCC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCC--EEEEEEhhh
Confidence 489999999743 3456777777777675 444554443
No 380
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=40.73 E-value=52 Score=26.86 Aligned_cols=62 Identities=13% Similarity=0.032 Sum_probs=40.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH-hhCCCeEEEEecCccCc
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGIKIIIVGDGVEAH 180 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a-e~~GikVIIAvAG~AAh 180 (185)
.+.++.+.. ...+.+.+++.+++...++.|+. ...++..+.++.. ++.|++|||+--|.++.
T Consensus 14 ~ii~i~~~~---~L~~~~~~i~~e~~~~~~I~vi~--~~le~av~~a~~~~~~~~~dVIISRGgta~~ 76 (225)
T 2pju_A 14 PVIWTVSVT---RLFELFRDISLEFDHLANITPIQ--LGFEKAVTYIRKKLANERCDAIIAAGSNGAY 76 (225)
T ss_dssp CEEEEECCH---HHHHHHHHHHTTTTTTCEEEEEC--CCHHHHHHHHHHHTTTSCCSEEEEEHHHHHH
T ss_pred CEEEEEchH---HHHHHHHHHHHhhCCCceEEEec--CcHHHHHHHHHHHHhcCCCeEEEeCChHHHH
Confidence 466666443 33345666777888777888765 3356666666554 44579999998776543
No 381
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=40.58 E-value=51 Score=26.90 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=17.4
Q ss_pred CCCeeEEEEcCCCCchHHHHHHHHHhhCC-CeEEEEe
Q 029926 139 GVPYEIKILSPHQNRKGALSYALSAKERG-IKIIIVG 174 (185)
Q Consensus 139 GIpyEvrVaSAHRtPe~l~ey~k~ae~~G-ikVIIAv 174 (185)
++|.-+++. ..-+++.+.++++.+++.| ++.|++.
T Consensus 160 ~~Pv~vK~~-~~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 160 GLPFGVKMP-PYFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CSCEEEEEC-CCCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CCCEEEEEC-CCCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 455555542 2234445555555555555 5555443
No 382
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=40.21 E-value=67 Score=26.62 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=36.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC---------------------CeeEEEEcCCCCchHHHHHHHHHhh--CCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV---------------------PYEIKILSPHQNRKGALSYALSAKE--RGI 168 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI---------------------pyEvrVaSAHRtPe~l~ey~k~ae~--~Gi 168 (185)
+.||+||+|+.|- +.+.+++.|-+-|. ... .+..=-..++.++++++...+ ..+
T Consensus 28 ~gKvalVTGas~G--IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSG--IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAV-GIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4579999999874 44555555555554 221 111223455566666554432 346
Q ss_pred eEEEEecCcc
Q 029926 169 KIIIVGDGVE 178 (185)
Q Consensus 169 kVIIAvAG~A 178 (185)
+++|--||..
T Consensus 105 DiLVNNAG~~ 114 (273)
T 4fgs_A 105 DVLFVNAGGG 114 (273)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 7888877764
No 383
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=40.20 E-value=65 Score=27.73 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------e--------------------EEEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------E--------------------IKILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------E--------------------vrVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. + ..|-+..=++++++++++++.++|++||+=
T Consensus 40 G~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 117 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVD 117 (478)
T ss_dssp BCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57777777778899999863 2 122223346899999999999999999973
No 384
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=40.17 E-value=1.3e+02 Score=23.53 Aligned_cols=62 Identities=10% Similarity=0.167 Sum_probs=38.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHH-----------------------HHHHHHHhh--
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGA-----------------------LSYALSAKE-- 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l-----------------------~ey~k~ae~-- 165 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|+++.+ .++++...+
T Consensus 7 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 7 YAGKVVVVTGGGR--GIGAGIVRAFVNSGA--RVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTCEEEEETCSS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3457899999987 456677777777774 33333 3554443 333333221
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 81 g~iD~lv~nAg~~ 93 (270)
T 1yde_A 81 GRLDCVVNNAGHH 93 (270)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999999864
No 385
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=40.14 E-value=1.1e+02 Score=24.33 Aligned_cols=64 Identities=11% Similarity=0.100 Sum_probs=39.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------------------------CCCchHHHH
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------------------------HQNRKGALS 158 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA--------------------------------HRtPe~l~e 158 (185)
++.++++|+|..+- +...+++.|-+-|. .+.+++- -..++.+.+
T Consensus 7 l~~k~vlVTGas~G--IG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 7 LRGKTMFISGGSRG--IGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp CTTCEEEEESCSSH--HHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 45678999998874 55667777766664 2333221 122344555
Q ss_pred HHHHHhh--CCCeEEEEecCcc
Q 029926 159 YALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 159 y~k~ae~--~GikVIIAvAG~A 178 (185)
++++..+ ..++++|-.||..
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 5554432 3689999999875
No 386
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=40.11 E-value=1.2e+02 Score=23.08 Aligned_cols=27 Identities=19% Similarity=0.084 Sum_probs=16.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 4 ~~k~vlVtGas~--gIG~~~a~~l~~~G~ 30 (254)
T 1sby_A 4 TNKNVIFVAALG--GIGLDTSRELVKRNL 30 (254)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTCC
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 345667777765 556666666666664
No 387
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=40.09 E-value=1.2e+02 Score=23.25 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=38.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc------------------------hHHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP------------------------e~l~ey~k~ae~-- 165 (185)
+.++++|+|..+ -+...+++.|-+-|. ++.++ .|++ +.+.++++...+
T Consensus 11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 11 SGRKAIVTGGSK--GIGAAIARALDKAGA--TVAIA--DLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 457899999987 456677777777774 33332 3443 334444433322
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 85 g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 85 GGFDLLCANAGVS 97 (263)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 2689999999864
No 388
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=39.95 E-value=38 Score=28.81 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=46.1
Q ss_pred CeEEEEeccCCCHH---HHHHHHHHHHHhCCCe-eEEEEc---CCC--CchHHHHHHHHHhhCC--CeEEEEecCc----
Q 029926 113 PIVGIIMESDSDLP---VMNDAARTLSDFGVPY-EIKILS---PHQ--NRKGALSYALSAKERG--IKIIIVGDGV---- 177 (185)
Q Consensus 113 ~kVaIIMGS~SDl~---vmekA~~vLeefGIpy-EvrVaS---AHR--tPe~l~ey~k~ae~~G--ikVIIAvAG~---- 177 (185)
++|++|.|++-+.. .-+...+.|++.|.++ |++.-| ..+ -|+.....++...+.. .-|+|++.|.
T Consensus 20 mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGTGiG~sI 99 (231)
T 3c5y_A 20 MKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTGMGSML 99 (231)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSSHHHHH
T ss_pred ceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCcHHHHH
Confidence 47999999998844 4566777899999753 443332 112 3666666665544432 4788888884
Q ss_pred -cCcCcCC
Q 029926 178 -EAHLSGT 184 (185)
Q Consensus 178 -AAhLPGV 184 (185)
++-.||+
T Consensus 100 AANKv~GI 107 (231)
T 3c5y_A 100 AANAMPGV 107 (231)
T ss_dssp HHHTSTTC
T ss_pred HHhcCCCe
Confidence 4445554
No 389
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=39.90 E-value=1.3e+02 Score=23.44 Aligned_cols=61 Identities=13% Similarity=0.104 Sum_probs=40.1
Q ss_pred CCeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
-.+|++|.|.... ..-.+...+.|+++|++++..... +.+...+.+++... +.++|++...
T Consensus 133 ~~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~---~~~~~~~~~~~l~~-~~dai~~~~D 195 (295)
T 3lft_A 133 VKTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAVP---STNEIASTVTVMTS-KVDAIWVPID 195 (295)
T ss_dssp CCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEES---SGGGHHHHHHHHTT-TCSEEEECSC
T ss_pred CcEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEecC---CHHHHHHHHHHHHh-cCCEEEECCc
Confidence 3579999997432 234567778889999987554332 35666666665543 5788887654
No 390
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=39.70 E-value=1e+02 Score=26.45 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=43.5
Q ss_pred eEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC
Q 029926 114 IVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 166 (185)
Q Consensus 114 kVaIIMGS~SD-l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~ 166 (185)
...|+.|.+.+ .-+++.-.+.++++||.++.....+.-+.+++.+.++.+.++
T Consensus 37 Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 90 (285)
T 3l07_A 37 LVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNND 90 (285)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 46666776644 456788889999999999999999999999999999877654
No 391
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=39.61 E-value=1.3e+02 Score=23.23 Aligned_cols=61 Identities=10% Similarity=0.055 Sum_probs=33.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc------------------------hHHHHHHHHHhh--CC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE--RG 167 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP------------------------e~l~ey~k~ae~--~G 167 (185)
++++|+|..+- +...+++.|-+.|-.+.+ +-..|++ +.+.++++...+ ..
T Consensus 3 k~~lVTGas~G--IG~aia~~l~~~g~~~~v--~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 3 KVILVTGVSRG--IGKSIVDVLFSLDKDTVV--YGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CEEEECSTTSH--HHHHHHHHHHHHCSSCEE--EEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCch--HHHHHHHHHHhcCCCeEE--EEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 57777777663 445555556555432222 2233444 444444443322 36
Q ss_pred CeEEEEecCcc
Q 029926 168 IKIIIVGDGVE 178 (185)
Q Consensus 168 ikVIIAvAG~A 178 (185)
++++|-.||..
T Consensus 79 id~lvnnAg~~ 89 (254)
T 3kzv_A 79 IDSLVANAGVL 89 (254)
T ss_dssp CCEEEEECCCC
T ss_pred ccEEEECCccc
Confidence 89999999874
No 392
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=39.60 E-value=1.1e+02 Score=27.08 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=42.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
..|.|+..++..++.+.+....|.+-||..|+- |+.-..+..-++.|+..|+...|.+
T Consensus 420 ~~V~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 477 (517)
T 4g85_A 420 TQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 477 (517)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHTTCCEEEC----SSSSCCHHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 458888888888999999999999999988763 3333345555566667778655444
No 393
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=39.57 E-value=49 Score=22.58 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=27.2
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC
Q 029926 115 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH 150 (185)
Q Consensus 115 VaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH 150 (185)
|.|.+. +.=+.++++...|+++|++|+..-+..+
T Consensus 21 v~vy~~--~~Cp~C~~~~~~L~~~~i~~~~~di~~~ 54 (113)
T 3rhb_A 21 VVIYSK--TWCSYCTEVKTLFKRLGVQPLVVELDQL 54 (113)
T ss_dssp EEEEEC--TTCHHHHHHHHHHHHTTCCCEEEEGGGS
T ss_pred EEEEEC--CCChhHHHHHHHHHHcCCCCeEEEeecC
Confidence 555554 4569999999999999999987777654
No 394
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=39.56 E-value=58 Score=29.30 Aligned_cols=49 Identities=24% Similarity=0.322 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHHhCCCe-eE------------------EEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 124 DLPVMNDAARTLSDFGVPY-EI------------------KILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpy-Ev------------------rVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
|+.-+.+-.+-|+++||.. .+ .|-+..=+++++.++++++.++|++||+
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 237 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLL 237 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 7766656679999999973 11 1222223689999999999999999997
No 395
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.49 E-value=1.1e+02 Score=23.61 Aligned_cols=28 Identities=21% Similarity=0.132 Sum_probs=19.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 4 ~~~k~vlVTGas~--gIG~~ia~~l~~~G~ 31 (278)
T 1spx_A 4 FAEKVAIITGSSN--GIGRATAVLFAREGA 31 (278)
T ss_dssp TTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 3456888888876 456666676766664
No 396
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=39.41 E-value=35 Score=24.89 Aligned_cols=41 Identities=10% Similarity=0.134 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCCchHHHHHHHHH
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALSA 163 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvr-VaSAHRtPe~l~ey~k~a 163 (185)
+.=+.+++|...|++.||+|+.+ |..-.-+.+++.++.+..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 12 PACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHHc
Confidence 44579999999999999999755 444555677777777644
No 397
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=39.41 E-value=48 Score=24.13 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCC-CCchHHHHHHH
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSPH-QNRKGALSYAL 161 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSAH-RtPe~l~ey~k 161 (185)
+.=+.+++|...|++.||+|++.=+.-+ -+.+++.++.+
T Consensus 9 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 9 PSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence 4458999999999999999977655432 33456666654
No 398
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=39.28 E-value=1.1e+02 Score=26.40 Aligned_cols=53 Identities=9% Similarity=0.130 Sum_probs=43.2
Q ss_pred eEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC
Q 029926 114 IVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 166 (185)
Q Consensus 114 kVaIIMGS~SD-l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~ 166 (185)
...|+.|.+.+ ..+++.-.+.++++||.++.....+.-+.+++.+.++.+.++
T Consensus 38 Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 91 (286)
T 4a5o_A 38 LAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDD 91 (286)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 46667776543 445778889999999999999999999999999999877654
No 399
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=39.16 E-value=1.4e+02 Score=23.36 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=42.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------CCCchHHHHHHHHHhh--CCCeEEEEe
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------HQNRKGALSYALSAKE--RGIKIIIVG 174 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSA--------------HRtPe~l~ey~k~ae~--~GikVIIAv 174 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.+.+- -..++.+.++++...+ ..++++|-.
T Consensus 19 l~~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n 94 (253)
T 2nm0_A 19 HMSRSVLVTGGNR--GIGLAIARAFADAGD--KVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN 94 (253)
T ss_dssp -CCCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3457999999988 467778888888784 3433321 1235566666655432 357999999
Q ss_pred cCcc
Q 029926 175 DGVE 178 (185)
Q Consensus 175 AG~A 178 (185)
||..
T Consensus 95 Ag~~ 98 (253)
T 2nm0_A 95 AGVT 98 (253)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 9975
No 400
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=39.11 E-value=82 Score=24.75 Aligned_cols=65 Identities=9% Similarity=0.080 Sum_probs=39.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC--------------------------chHHHHHHHHHh
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN--------------------------RKGALSYALSAK 164 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt--------------------------Pe~l~ey~k~ae 164 (185)
++.++++|+|..|.--+...+++.|-+-|. ++.++ .|+ ++.+.++++...
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA--QLAFT--YATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEE--ESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEE--eCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 345789999987433466777777777774 33333 233 334444444332
Q ss_pred h--CCCeEEEEecCccC
Q 029926 165 E--RGIKIIIVGDGVEA 179 (185)
Q Consensus 165 ~--~GikVIIAvAG~AA 179 (185)
+ .+++++|-.||...
T Consensus 95 ~~~g~iD~lv~~Ag~~~ 111 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAP 111 (285)
T ss_dssp HHTSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 2 36899999999753
No 401
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=39.07 E-value=1.1e+02 Score=22.95 Aligned_cols=26 Identities=8% Similarity=0.240 Sum_probs=15.0
Q ss_pred chHHHHHHHHHhh--CCCeEEEEecCcc
Q 029926 153 RKGALSYALSAKE--RGIKIIIVGDGVE 178 (185)
Q Consensus 153 Pe~l~ey~k~ae~--~GikVIIAvAG~A 178 (185)
++.+.++++...+ .+++++|-.||..
T Consensus 66 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 66 LQSIRALRDFLRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence 4444444443322 2578888888864
No 402
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=38.97 E-value=1.3e+02 Score=23.09 Aligned_cols=67 Identities=16% Similarity=0.011 Sum_probs=40.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------CCCCchHHHHHHHHHh
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS--------------------------PHQNRKGALSYALSAK 164 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS--------------------------AHRtPe~l~ey~k~ae 164 (185)
++.++++|+|..+.--+...+++.|-+-|.. +-+++ =-..++.+.++++...
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 3456888888875534555566666555643 22221 1234566666665553
Q ss_pred h--CCCeEEEEecCccC
Q 029926 165 E--RGIKIIIVGDGVEA 179 (185)
Q Consensus 165 ~--~GikVIIAvAG~AA 179 (185)
+ ..++++|-.||...
T Consensus 83 ~~~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFAN 99 (266)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCeeEEEEcccccc
Confidence 3 36799999998754
No 403
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=38.96 E-value=81 Score=27.90 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=37.8
Q ss_pred CCH-HHHHHHHHHHHHhCCCeeEEEEcC-----------------------------CCCchHHHHHHHHHhhCCCeEEE
Q 029926 123 SDL-PVMNDAARTLSDFGVPYEIKILSP-----------------------------HQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 123 SDl-~vmekA~~vLeefGIpyEvrVaSA-----------------------------HRtPe~l~ey~k~ae~~GikVII 172 (185)
-|+ .-+.+-.+-|+++||.. +.+... -=++++++++++++.++|++||+
T Consensus 33 Gd~~~gi~~~LdyLk~LGvt~-IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~Vil 111 (527)
T 1gcy_A 33 NDWYNILRQQAATIAADGFSA-IWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLY 111 (527)
T ss_dssp TTHHHHHHHHHHHHHHTTCSE-EEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCE-EEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 567 88888889999999973 122211 12477899999999999999997
Q ss_pred E
Q 029926 173 V 173 (185)
Q Consensus 173 A 173 (185)
=
T Consensus 112 D 112 (527)
T 1gcy_A 112 D 112 (527)
T ss_dssp E
T ss_pred E
Confidence 3
No 404
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=38.87 E-value=46 Score=26.91 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=37.8
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl~--vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+||. +.|+. .++...+.+++.|+...... .......+..+++..++.+.+|||...
T Consensus 139 ~~v~ii~--d~~~g~~~~~~~~~~~~~~g~~v~~~~--~~~~~~d~~~~l~~i~~~~~~vi~~~~ 199 (395)
T 3h6g_A 139 KTVTVVY--DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKEMKRGKEFHVIFDC 199 (395)
T ss_dssp SEEEEEE--SSTHHHHHTHHHHTGGGTSSCEEEEEE--CCSSGGGGHHHHHHHHHTTCCEEEEES
T ss_pred eEEEEEE--EChhHHHHHHHHHHhhhcCCceEEEEE--eCCCchhHHHHHHHHhhcCCeEEEEEC
Confidence 5799985 45543 34555556677788654432 233445677788888888888887654
No 405
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=38.78 E-value=1.6e+02 Score=24.16 Aligned_cols=28 Identities=11% Similarity=0.030 Sum_probs=20.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
++.++++|+|..+ -+...++..|-+-|.
T Consensus 7 l~gk~~lVTGas~--GIG~~~a~~La~~Ga 34 (319)
T 1gz6_A 7 FDGRVVLVTGAGG--GLGRAYALAFAERGA 34 (319)
T ss_dssp CTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 3457899999876 456677777777774
No 406
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=38.63 E-value=39 Score=27.76 Aligned_cols=44 Identities=11% Similarity=0.096 Sum_probs=37.1
Q ss_pred HHHHHHhCCCeeEEEEcCCCCc-hHHHHHHHHHhhCCCeEEEEec
Q 029926 132 ARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 132 ~~vLeefGIpyEvrVaSAHRtP-e~l~ey~k~ae~~GikVIIAvA 175 (185)
...|+++|++|-+-..|.+|.. .++.+.++.+.+.|.++++++-
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999998875 5788888889899999998873
No 407
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=38.57 E-value=1.6e+02 Score=23.99 Aligned_cols=63 Identities=13% Similarity=-0.081 Sum_probs=41.6
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhC-CCeeEEEEcCCCCchHH-HHHHHHHhh-CCCeEEEEecCcc
Q 029926 114 IVGIIMESDSDL---PVMNDAARTLSDFG-VPYEIKILSPHQNRKGA-LSYALSAKE-RGIKIIIVGDGVE 178 (185)
Q Consensus 114 kVaIIMGS~SDl---~vmekA~~vLeefG-IpyEvrVaSAHRtPe~l-~ey~k~ae~-~GikVIIAvAG~A 178 (185)
+|.++..++-|. ..++++.+.|+.+| +++++.-+.. +.+.+. .++.+...+ .| +++|-++|+.
T Consensus 36 ~ViLv~~~~~~~~~~~A~~~i~~~l~~~~~i~~e~~~vd~-~df~~~v~~i~~~i~~~~~-~iivnlsGG~ 104 (244)
T 2wte_A 36 SLVIVVPSPIVSGTRAAIESLRAQISRLNYPPPRIYEIEI-TDFNLALSKILDIILTLPE-PIISDLTMGM 104 (244)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHHHHHTCCCEEEEEECC-CSHHHHHHHHHHHHTTSCS-SEEEECSSSC
T ss_pred EEEEEeCCCcchhHHHHHHHHHHHHHHcCCCceEEEEECC-ccHHHHHHHHHHHHhhcCC-cEEEEecCCc
Confidence 577777775443 34666677777887 5898888875 555444 445554444 34 8999888874
No 408
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=38.37 E-value=77 Score=23.54 Aligned_cols=39 Identities=8% Similarity=0.135 Sum_probs=31.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 153 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP 153 (185)
.+|+|+.....+..-+-...++|+.-| |++.++|.+..|
T Consensus 10 ~~v~il~~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 48 (190)
T 2vrn_A 10 KKIAILAADGVEEIELTSPRAAIEAAG--GTTELISLEPGE 48 (190)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHTT--CEEEEEESSSSE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHCC--CEEEEEecCCCc
Confidence 579999988777777777788888876 688899887654
No 409
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=38.29 E-value=83 Score=25.34 Aligned_cols=61 Identities=7% Similarity=0.083 Sum_probs=0.0
Q ss_pred eEEEEeccCCCHHH--HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHH--HhhCCCeEEEEec
Q 029926 114 IVGIIMESDSDLPV--MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALS--AKERGIKIIIVGD 175 (185)
Q Consensus 114 kVaIIMGS~SDl~v--mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~--ae~~GikVIIAvA 175 (185)
+|+||.++++++.. .+...+.|++.|++. +...............++. ..+.+.++|++..
T Consensus 143 ~iaii~~~~~~~g~~~~~~~~~~l~~~G~~v-~~~~~~~~~~~d~~~~~~~~~l~~~~~dav~~~~ 207 (391)
T 3eaf_A 143 KLALAYDSKVAYSRSPIGAIKKAAPSLGLQV-VGDYDLPLRATEADAERIAREMLAADPDYVWCGN 207 (391)
T ss_dssp EEEEEECTTCHHHHTTHHHHHHHTGGGTEEE-EEEEECCTTCCHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEEEecCChhHHHHHHHHHHHHHHcCCce-eeeeccCCCCcCHHHHHHHHHHHHcCCCEEEEec
No 410
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=38.28 E-value=1.4e+02 Score=23.06 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=17.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (260)
T 2z1n_A 6 QGKLAVVTAGSS--GLGFASALELARNGA 32 (260)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 456888888876 445666666666663
No 411
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=38.26 E-value=1.4e+02 Score=23.24 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=20.1
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.++.++++|+|..+ -+...+++.|-+-|.
T Consensus 23 ~l~~k~vlITGasg--giG~~la~~L~~~G~ 51 (302)
T 1w6u_A 23 SFQGKVAFITGGGT--GLGKGMTTLLSSLGA 51 (302)
T ss_dssp TTTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 34557899999887 456666666766663
No 412
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=38.18 E-value=1.3e+02 Score=22.92 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=37.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc--------------------------hHHHHHHHHHh
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR--------------------------KGALSYALSAK 164 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP--------------------------e~l~ey~k~ae 164 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|.+ +.+.++++...
T Consensus 14 l~~k~vlITGasg--giG~~~a~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 14 LQDKVAIITGGAG--GIGETTAKLFVRYGA--KVVIA--DIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--cCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 4457889999876 556667777766663 33333 3443 33444443322
Q ss_pred h--CCCeEEEEecCccC
Q 029926 165 E--RGIKIIIVGDGVEA 179 (185)
Q Consensus 165 ~--~GikVIIAvAG~AA 179 (185)
+ .+++++|-.||...
T Consensus 88 ~~~~~id~li~~Ag~~~ 104 (278)
T 2bgk_A 88 AKHGKLDIMFGNVGVLS 104 (278)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCcccC
Confidence 1 36899999998653
No 413
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=38.08 E-value=56 Score=30.33 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchH-HHHHHHHHhhCCCeEEEEe
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKG-ALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~-l~ey~k~ae~~GikVIIAv 174 (185)
.|.+.+++=.+.++++||+ -|||. |-.|+. -.++++.+.+.|+.|++.+
T Consensus 84 ~~~e~~~rDi~LmK~~GiN-~VRvy--~~~P~~~~d~~ldl~~~~GIyVIle~ 133 (555)
T 2w61_A 84 ADPKICLRDIPFLKMLGVN-TLRVY--AIDPTKSHDICMEALSAEGMYVLLDL 133 (555)
T ss_dssp GCHHHHHHHHHHHHHHTCS-EEEEC--CCCTTSCCHHHHHHHHHTTCEEEEES
T ss_pred CCHHHHHHHHHHHHHcCCC-EEEEe--ccCCCCChHHHHHHHHhcCCEEEEeC
Confidence 4789999999999999998 67883 776654 3567777889999999985
No 414
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=38.05 E-value=1.2e+02 Score=26.08 Aligned_cols=53 Identities=9% Similarity=0.168 Sum_probs=43.3
Q ss_pred eEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC
Q 029926 114 IVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 166 (185)
Q Consensus 114 kVaIIMGS~SD-l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~ 166 (185)
...|+.|.+.+ ..+++.-.+.++++||.++.....+.-+.+++.+.++.+.++
T Consensus 36 Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 89 (285)
T 3p2o_A 36 LAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHD 89 (285)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 46666776543 455788889999999999999999999999999999887654
No 415
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.00 E-value=1.2e+02 Score=22.45 Aligned_cols=61 Identities=16% Similarity=0.179 Sum_probs=40.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC-------------CCchHHHHHHHHHh-hCCCeEEEEecCcc
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH-------------QNRKGALSYALSAK-ERGIKIIIVGDGVE 178 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAH-------------RtPe~l~ey~k~ae-~~GikVIIAvAG~A 178 (185)
++++|+|..+ -+....++.|-+-|. ++.+++-. ..++.+.++++..+ ..+++++|-.||..
T Consensus 3 k~vlVtGasg--giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~ 77 (242)
T 1uay_A 3 RSALVTGGAS--GLGRAAALALKARGY--RVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVG 77 (242)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHHTC--EEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccccc
Confidence 5789999887 556777777777774 44443321 33566777776542 23689999999864
No 416
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=37.89 E-value=86 Score=23.63 Aligned_cols=39 Identities=5% Similarity=0.025 Sum_probs=31.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ 151 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHR 151 (185)
|+.+|+|+..-..+..-+-...++|+.-| |++.++|...
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~ 40 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAG--IKVTVAGLAG 40 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEETTC
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence 45689999988777777777888999887 6888998775
No 417
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=37.63 E-value=81 Score=26.98 Aligned_cols=58 Identities=17% Similarity=0.114 Sum_probs=41.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
..|.|+..++..++.+.+....|.+-||..|+ .|+....+.+-++.|...|+..+|.+
T Consensus 367 ~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~----~~~~~~~l~~q~k~A~~~g~~~~vii 424 (464)
T 4g84_A 367 TQVLVASAQKKLLEERLKLVSELWDAGIKAEL----LYKKNPKLLNQLQYCEEAGIPLVAII 424 (464)
T ss_dssp CCEEEECSSSSCHHHHHHHHHHHHHTTCCEEC----CSCSSCCHHHHHHHHHHHTCCEEEEC
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHHCCCcEEE----EeCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 35888888888899999999999999998776 23333344445556667778655543
No 418
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=37.62 E-value=1.2e+02 Score=26.32 Aligned_cols=55 Identities=5% Similarity=-0.005 Sum_probs=40.8
Q ss_pred EEEEeccCCC-------------HHHHHHHHHHHHHhC--CCeeEEEEcCCCC-chHHHHHHHHHhhCCCeE
Q 029926 115 VGIIMESDSD-------------LPVMNDAARTLSDFG--VPYEIKILSPHQN-RKGALSYALSAKERGIKI 170 (185)
Q Consensus 115 VaIIMGS~SD-------------l~vmekA~~vLeefG--IpyEvrVaSAHRt-Pe~l~ey~k~ae~~GikV 170 (185)
+.-+..|.|| ++.+.++.+.+++.| +...+....+.|+ |+.+.++++.+.+- ++.
T Consensus 90 ~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~ 160 (382)
T 2ztj_A 90 GIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDR 160 (382)
T ss_dssp EEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSE
T ss_pred EEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCE
Confidence 3444557888 688899999999999 7777777778885 78889999888776 654
No 419
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=37.58 E-value=30 Score=28.82 Aligned_cols=34 Identities=9% Similarity=0.102 Sum_probs=23.1
Q ss_pred CCeEEEEeccCCCHH-----HHHHHHHHHHHhCCCeeEEEE
Q 029926 112 TPIVGIIMESDSDLP-----VMNDAARTLSDFGVPYEIKIL 147 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~-----vmekA~~vLeefGIpyEvrVa 147 (185)
+.+|+||+|+.|-.- -+..+.+.|++.|. ++..+
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy--~v~~i 41 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASAVFENINTNKF--DIIPI 41 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTE--EEEEE
T ss_pred CCEEEEEECCCccchHHHHHHHHHHHHHHhHhCC--EEEEE
Confidence 357999999988742 35566777777764 54444
No 420
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=37.58 E-value=40 Score=25.35 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHH
Q 029926 126 PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYAL 161 (185)
Q Consensus 126 ~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k 161 (185)
+.+.++.-+|++.||+||...+........-.+|.+
T Consensus 13 p~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 48 (228)
T 4hi7_A 13 PPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLK 48 (228)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHH
Confidence 788999999999999999988876544444445543
No 421
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=37.58 E-value=72 Score=30.81 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcC------------------CCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSP------------------HQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSA------------------HRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.|.+.+.+..+.+++.|||+|+-++.. .|-|+ ..+++++..++|.++++-+
T Consensus 274 ~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPd-p~~mv~~Lh~~G~k~vl~i 342 (817)
T 4ba0_A 274 RSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPT-PLDMMADFKQQGVKTVLIT 342 (817)
T ss_dssp CSHHHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEcccccCCccccccCccccccccCCC-HHHHHHHHHHCCCEEEEEe
Confidence 377888899999999999999999974 24455 4788889999999887744
No 422
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=37.57 E-value=1e+02 Score=26.09 Aligned_cols=78 Identities=17% Similarity=0.109 Sum_probs=55.5
Q ss_pred hhhhhhhhcCCCceeeeccCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhh
Q 029926 86 TRKDYSSVREPSTVFEEENANGDSTDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE 165 (185)
Q Consensus 86 ~~~~~~~~~~p~~~~~~ea~~~~~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~ 165 (185)
++.+.+...-|++....... .||..+ ....-+. .+.++|++.-.++..--++.+.+.+++..+.+
T Consensus 33 ~~~~~L~~~~pd~vsVT~~~-------------~g~~r~-~t~~~a~-~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~ 97 (310)
T 3apt_A 33 RTLEELKAFRPAFVSITYGA-------------MGSTRE-RSVAWAQ-RIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVE 97 (310)
T ss_dssp HHHHHHGGGCCSEEEECCCS-------------TTCSHH-HHHHHHH-HHHHTTCCBCEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEEecCC-------------CCCcch-hHHHHHH-HHHHhCCCeEEEeecCCCCHHHHHHHHHHHHH
Confidence 34455565566766664322 123233 2444444 44489999999999999999999999999999
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.|++=|.|..|=.
T Consensus 98 ~GI~niLaLrGD~ 110 (310)
T 3apt_A 98 SGVENLLALRGDP 110 (310)
T ss_dssp TTCCEEEEECCCC
T ss_pred CCCCEEEEEcCCC
Confidence 9999888888864
No 423
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=37.52 E-value=26 Score=29.33 Aligned_cols=39 Identities=13% Similarity=0.243 Sum_probs=25.8
Q ss_pred CCeEEEEeccCCCHHH-----HHHHHHHHHHhCCCeeEEEEcCCCC
Q 029926 112 TPIVGIIMESDSDLPV-----MNDAARTLSDFGVPYEIKILSPHQN 152 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~v-----mekA~~vLeefGIpyEvrVaSAHRt 152 (185)
+.+|+|++|+.|-.-- +..+.+.|++.| |++..+..++.
T Consensus 3 ~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~--~~v~~i~i~~~ 46 (364)
T 3i12_A 3 KLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTR--FDVVLLGIDKA 46 (364)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTT--EEEEEEEECTT
T ss_pred ccEEEEEeccCCCCccchHHHHHHHHHHHhhcC--CeEEEEEECCC
Confidence 4579999999987643 344555555554 67777666554
No 424
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=37.51 E-value=1.4e+02 Score=23.14 Aligned_cols=62 Identities=8% Similarity=0.048 Sum_probs=35.6
Q ss_pred CCeEEEEeccCCCHHHHH----HHHH----HHHHhCCCeeEEEEcCC-------------CCchHHHHHHHHHhhCCCeE
Q 029926 112 TPIVGIIMESDSDLPVMN----DAAR----TLSDFGVPYEIKILSPH-------------QNRKGALSYALSAKERGIKI 170 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vme----kA~~----vLeefGIpyEvrVaSAH-------------RtPe~l~ey~k~ae~~GikV 170 (185)
+.+|.+|.||...-..-. .+.+ .|++-|-..++.++... ..|+.+.++.+...+ ++.
T Consensus 11 ~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~--AD~ 88 (191)
T 3k1y_A 11 MRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSA--SDG 88 (191)
T ss_dssp SEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHH--CSE
T ss_pred hceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHH--CCE
Confidence 358999999998755443 3333 34444323344444321 134777888877766 455
Q ss_pred EEEec
Q 029926 171 IIVGD 175 (185)
Q Consensus 171 IIAvA 175 (185)
||-++
T Consensus 89 ivi~s 93 (191)
T 3k1y_A 89 LVVAT 93 (191)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 55443
No 425
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=37.46 E-value=1.3e+02 Score=22.90 Aligned_cols=51 Identities=18% Similarity=0.131 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029926 125 LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 181 (185)
Q Consensus 125 l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhL 181 (185)
....+++.+.|++.|++++..+.. -.| .+.+.+.+++. +.++.++|....+
T Consensus 198 ~~~l~~~~~~l~~~~~~~~~~~~~--g~~--~~~i~~~a~~~--dliV~G~~~~~~~ 248 (268)
T 3ab8_A 198 EAWALEAEAYLRDHGVEASALVLG--GDA--ADHLLRLQGPG--DLLALGAPVRRLV 248 (268)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC--SCH--HHHHHHHCCTT--EEEEEECCCSCCS
T ss_pred HHHHHHHHHHHHHcCCceEEEEeC--CCh--HHHHHHHHHhC--CEEEECCcccccE
Confidence 345666777777778877776653 222 34455555444 7777766444433
No 426
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=37.45 E-value=1.3e+02 Score=22.75 Aligned_cols=35 Identities=3% Similarity=-0.109 Sum_probs=24.5
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh--CCCeeEEEE
Q 029926 113 PIVGIIMESDSD-----LPVMNDAARTLSDF--GVPYEIKIL 147 (185)
Q Consensus 113 ~kVaIIMGS~SD-----l~vmekA~~vLeef--GIpyEvrVa 147 (185)
.+|.||.||..- ...++.+.+.|++- |.++++.=+
T Consensus 2 mkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 2 SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 369999999764 34567777777776 776655444
No 427
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=37.37 E-value=1.2e+02 Score=23.58 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 109 STDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
..+..++++|+|..+ -+...+++.|-+-|... ++...|.++.+.+..+.....+.++.+..+-.+.
T Consensus 21 ~~~~~k~vlITGas~--gIG~~~a~~l~~~G~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 86 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMG--GLGAAISRRLHDAGMAV---AVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD 86 (269)
T ss_dssp ---CCCEEEETTTTS--HHHHHHHHHHHTTTCEE---EEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC
T ss_pred hhhcCCEEEEECCCc--hHHHHHHHHHHHCCCEE---EEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC
No 428
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=37.37 E-value=55 Score=29.13 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eEE-EEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------------------EIK-ILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------------------Evr-VaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
-|+.-+.+-.+-|+++||.. +.. |-+..=++++++++++++.++|++||+=+
T Consensus 28 Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 57887777778999999852 333 43444578899999999999999999743
No 429
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=37.35 E-value=1.5e+02 Score=23.36 Aligned_cols=65 Identities=9% Similarity=0.046 Sum_probs=0.0
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccC
Q 029926 110 TDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 110 ~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
..+.++++|+|..+ -+...+++.|-+-|.. -++...|..+.+++..+..++.|.++....+-.+.
T Consensus 28 ~l~gk~~lVTGas~--GIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d 92 (271)
T 3v2g_A 28 SLAGKTAFVTGGSR--GIGAAIAKRLALEGAA---VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD 92 (271)
T ss_dssp CCTTCEEEEETTTS--HHHHHHHHHHHHTTCE---EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCCE---EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC
No 430
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=37.33 E-value=1.1e+02 Score=23.66 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=35.0
Q ss_pred CCeEEEEeccCC-CH-------HHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 112 TPIVGIIMESDS-DL-------PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 112 ~~kVaIIMGS~S-Dl-------~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
..+|.||.||.. .. ..++.+.+.|++-|. ++.++.... .+++.++.+...+ +++||-+
T Consensus 12 ~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~--~v~~~dL~~-~~d~~~~~~~l~~--AD~iV~~ 77 (204)
T 2amj_A 12 SSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGH--DVRIVRADS-DYDVKAEVQNFLW--ADVVIWQ 77 (204)
T ss_dssp CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTC--EEEEEESSS-CCCHHHHHHHHHH--CSEEEEE
T ss_pred CcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCC--EEEEEeCCc-cccHHHHHHHHHh--CCEEEEE
Confidence 458999999987 21 246667777777775 455555443 3456666666666 4555543
No 431
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=37.26 E-value=1.2e+02 Score=22.99 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=37.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCch--------------HHHHHHHHHhhCCCeEEEEecCccC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK--------------GALSYALSAKERGIKIIIVGDGVEA 179 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe--------------~l~ey~k~ae~~GikVIIAvAG~AA 179 (185)
++++|+|..+ -+...+++.|-+-|. ++.+++ |+++ .+.++++.. ..+++++|-.||...
T Consensus 2 k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~~--r~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCAT--GIGAATRKVLEAAGH--QIVGID--IRDAEVIADLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEE--SSSSSEECCTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCCT
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEe--CCchhhccccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCCC
Confidence 5889999987 567788888888884 444433 4332 222222211 135799999999653
No 432
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=37.25 E-value=34 Score=24.97 Aligned_cols=41 Identities=5% Similarity=0.004 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCCchHHHHHHHHH
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALSA 163 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvr-VaSAHRtPe~l~ey~k~a 163 (185)
+.=+.+++|...|++.||+|+.+ |..-.-+.+++.++.+..
T Consensus 13 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 54 (121)
T 3rdw_A 13 PRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQL 54 (121)
T ss_dssp TTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc
Confidence 44679999999999999999755 333445566677776543
No 433
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=37.19 E-value=1.3e+02 Score=22.36 Aligned_cols=39 Identities=10% Similarity=0.205 Sum_probs=28.8
Q ss_pred CCeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029926 112 TPIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQN 152 (185)
Q Consensus 112 ~~kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVaSAHRt 152 (185)
+++|.|+-+|.+- ..+++.+.+.|++.|+ ++.+......
T Consensus 4 ~~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~--~v~~~~~~~~ 44 (159)
T 3fni_A 4 ETSIGVFYVSEYGYSDRLAQAIINGITKTGV--GVDVVDLGAA 44 (159)
T ss_dssp CCEEEEEECTTSTTHHHHHHHHHHHHHHTTC--EEEEEESSSC
T ss_pred CCEEEEEEECCChHHHHHHHHHHHHHHHCCC--eEEEEECcCc
Confidence 4579999999763 5677888888888887 4556666554
No 434
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=37.16 E-value=1.5e+02 Score=23.16 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=31.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc-CCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS-AHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
+.++++|+|..+- +...+++.|-+-|. .+.++. .-|..+.+++..++.+..|.++....
T Consensus 10 ~~k~vlVTGas~G--IG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (262)
T 3ksu_A 10 KNKVIVIAGGIKN--LGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ 69 (262)
T ss_dssp TTCEEEEETCSSH--HHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEEECCCch--HHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 3457777777654 45556666666554 233322 23445566666665555555554443
No 435
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=37.07 E-value=1.2e+02 Score=22.10 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=42.7
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe--------------------eEEEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 116 GIIMESDSDLPVMNDAARTLSDFGVPY--------------------EIKILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 116 aIIMGS~SDl~vmekA~~vLeefGIpy--------------------EvrVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
.++.|.-+-...++.....|..+|++. -+-++|.-....++.+.++.++++|++++.
T Consensus 52 I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~ 128 (183)
T 2xhz_A 52 VVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128 (183)
T ss_dssp EEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEE
T ss_pred EEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEE
Confidence 344565555678888888888888763 256778888888899999999999987653
No 436
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=37.01 E-value=1.1e+02 Score=21.84 Aligned_cols=57 Identities=9% Similarity=0.109 Sum_probs=43.3
Q ss_pred CeEEEEeccCCCHHH--HHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCcc
Q 029926 113 PIVGIIMESDSDLPV--MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVE 178 (185)
Q Consensus 113 ~kVaIIMGS~SDl~v--mekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~A 178 (185)
.+|.++.|+--=-.. +++..+.+++.|++.++...+..-.++. . .++++||...-..
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~----~-----~~~DlIist~~l~ 80 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETY----M-----DGVHLICTTARVD 80 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTS----T-----TSCSEEEESSCCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhc----c-----CCCCEEEECCccc
Confidence 469999888666555 5899999999999998888887776552 1 2478998876654
No 437
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=37.01 E-value=37 Score=24.72 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCCchHHHHHHHH
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALS 162 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvr-VaSAHRtPe~l~ey~k~ 162 (185)
+.=+.+++|...|++-||+|+.+ |..-.-+.+++.++.+.
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~ 51 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN 51 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence 34579999999999999999765 43344556677777653
No 438
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=36.98 E-value=27 Score=28.21 Aligned_cols=87 Identities=13% Similarity=0.045 Sum_probs=50.1
Q ss_pred eeeeccccchhhhhhhhhhhcCCCceeeecc--CCC----CCC------CCCeEEEEeccCCCHHH---HHHHHHHHHHh
Q 029926 74 PVLASSNGSATSTRKDYSSVREPSTVFEEEN--ANG----DST------DTPIVGIIMESDSDLPV---MNDAARTLSDF 138 (185)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ea--~~~----~~~------~~~kVaIIMGS~SDl~v---mekA~~vLeef 138 (185)
||+||-+-.| +=.++.+...+++++|+++- +-. .+. .+++ .+++|..|-.+. +++..+.|+++
T Consensus 17 NvVas~~l~~-~ldL~~ia~~~~n~eY~P~~fpgli~Rl~~Pk~t~lIF~SGK-iv~TGAkS~e~a~~a~~~~~~~L~~l 94 (188)
T 2z8u_A 17 NVVVSTKIGD-NIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGK-VNCTGAKSKEEAEIAIKKIIKELKDA 94 (188)
T ss_dssp EEEEEEECCS-SCCHHHHHHHSSCCC-------CEEEEETTTTEEEEECTTSE-EEEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEeCC-eeCHHHHHhhCCCCEECCCCcccEEEEcCCCcEEEEEeCCCe-EEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 7888887777 66788888889999999883 322 111 1223 356775554332 56677889999
Q ss_pred CCCe----e----EEEEcCC-CCchHHHHHHHH
Q 029926 139 GVPY----E----IKILSPH-QNRKGALSYALS 162 (185)
Q Consensus 139 GIpy----E----vrVaSAH-RtPe~l~ey~k~ 162 (185)
|++. + =-|+|+- ..+=+|++++..
T Consensus 95 g~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~ 127 (188)
T 2z8u_A 95 GIDVIENPEIKIQNMVATADLGIEPNLDDIALM 127 (188)
T ss_dssp TCCCCSSCCCEEEEEEEEEECSSCCCHHHHHHH
T ss_pred CCCccccCceEEEEEEEEEecCCccCHHHHHhh
Confidence 9862 2 2345532 444456666643
No 439
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=36.97 E-value=98 Score=23.50 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=45.3
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe---------------eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 116 GIIMESDSDLPVMNDAARTLSDFGVPY---------------EIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 116 aIIMGS~SDl~vmekA~~vLeefGIpy---------------EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.++.|.-+=...++.....|..+|++. -+-++|.-....++.+.++.++++|++|| ++.+
T Consensus 50 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI-~IT~ 124 (200)
T 1vim_A 50 IFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLV-AVTG 124 (200)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEE-EEES
T ss_pred EEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEE-EEEC
Confidence 345555555778999999998899764 25678888888899999999999998765 4443
No 440
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=36.94 E-value=66 Score=24.76 Aligned_cols=58 Identities=14% Similarity=0.161 Sum_probs=43.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.|.||-=++...++++++.+.|.+.|+-.|+-.. |+-+.+-.-+.+++..++-.+|.+
T Consensus 10 Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~---r~~e~Lg~kIR~a~~~kvPy~lVV 67 (130)
T 1v95_A 10 DCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFL---NTEVSLSQALEDVSRGGSPFAIVI 67 (130)
T ss_dssp TEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEEC---TTSSCHHHHHHHHHHHTCSEEEEE
T ss_pred eEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecC---CCCCcHHHHHHHHHHcCCCEEEEE
Confidence 3777777889999999999999999998887321 224666666777777777666655
No 441
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=36.88 E-value=49 Score=26.87 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=39.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+||.-.+--...++...+.+++.|+...... ....+...+..++...++.+.+|||...
T Consensus 129 ~~v~ii~d~~~g~~~~~~~~~~~~~~g~~v~~~~-~~~~~~~d~~~~l~~ik~~~~~vii~~~ 190 (384)
T 3saj_A 129 QTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVN-ILTTTEEGYRMLFQDLEKKKERLVVVDC 190 (384)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHHHTCEEEEEE-GGGCCHHHHHHTTTTCCSCSEEEEEEEC
T ss_pred cEEEEEEeCchhHHHHHHHHHHhhhcCceEEEEE-eccCCchhHHHHHHHHhccCCcEEEEEc
Confidence 5799998333334567777888899998765444 2223444566666666666777777654
No 442
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=36.87 E-value=1e+02 Score=23.81 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=19.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 140 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGI 140 (185)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 10 l~~k~vlVTGas~--gIG~aia~~l~~~G~ 37 (252)
T 3f1l_A 10 LNDRIILVTGASD--GIGREAAMTYARYGA 37 (252)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 4457899999887 445666666666664
No 443
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=36.77 E-value=1.2e+02 Score=23.61 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=39.9
Q ss_pred CCeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
-.+|++|.|.... ..-.+...+.|+++|++++.... .+.+...+.+++... +.++|++...
T Consensus 140 ~~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~---~~~~~~~~~~~~l~~-~~dai~~~~D 202 (302)
T 2qh8_A 140 VKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATA---LKSADVQSATQAIAE-KSDVIYALID 202 (302)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEEC---SSGGGHHHHHHHHGG-GCSEEEECSC
T ss_pred CcEEEEEecCCCcchHHHHHHHHHHHHHcCCEEEEEec---CChHHHHHHHHHHhc-cCCEEEECCc
Confidence 3579999987532 23456777888999998754432 245666666665543 5788877654
No 444
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=36.68 E-value=70 Score=25.52 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=47.4
Q ss_pred eEEEEeccCCC-HHHHHHHHHHHHHhCCCe-eEEEEcCCC--CchHHHHHHHHHhhC--CCeEEEEecCc-----cCcCc
Q 029926 114 IVGIIMESDSD-LPVMNDAARTLSDFGVPY-EIKILSPHQ--NRKGALSYALSAKER--GIKIIIVGDGV-----EAHLS 182 (185)
Q Consensus 114 kVaIIMGS~SD-l~vmekA~~vLeefGIpy-EvrVaSAHR--tPe~l~ey~k~ae~~--GikVIIAvAG~-----AAhLP 182 (185)
.|-|..||+-. ++.=+...+.|++.|.++ |+..-+..+ -|+...+.++...+. ..-|+|++.|. +|-.|
T Consensus 12 ~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~siaANKv~ 91 (155)
T 1o1x_A 12 HVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGTGLGMSIAANRYR 91 (155)
T ss_dssp CCEEEEEECSTTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHTTST
T ss_pred ceeEEEeeCchHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHHHHhhcCC
Confidence 47889999877 777778888999999864 444444333 366666666554333 24788888884 55555
Q ss_pred CC
Q 029926 183 GT 184 (185)
Q Consensus 183 GV 184 (185)
|+
T Consensus 92 GI 93 (155)
T 1o1x_A 92 GI 93 (155)
T ss_dssp TC
T ss_pred Ce
Confidence 54
No 445
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=36.67 E-value=29 Score=25.26 Aligned_cols=41 Identities=7% Similarity=0.041 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCCchHHHHHHHHH
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALSA 163 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvr-VaSAHRtPe~l~ey~k~a 163 (185)
+.=+.+++|.+.|++-||+|+.+ |..-.-+.+++.++.+..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 12 PKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 44679999999999999999765 555566778888887654
No 446
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=36.56 E-value=1.5e+02 Score=22.93 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=36.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc----------------------CCCCchHHHHHHHHHhh--CC
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS----------------------PHQNRKGALSYALSAKE--RG 167 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS----------------------AHRtPe~l~ey~k~ae~--~G 167 (185)
+.++++|+|..+- +...+++.|-+-|.. +.+++ =-..++.+.+++++..+ .+
T Consensus 7 ~~k~vlVTGas~g--IG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 7 EGKSALITGSARG--IGRAFAEAYVREGAT--VAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TTCEEEEETCSSH--HHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 3568888998774 455666666666642 22221 12234444555544322 26
Q ss_pred CeEEEEecCccC
Q 029926 168 IKIIIVGDGVEA 179 (185)
Q Consensus 168 ikVIIAvAG~AA 179 (185)
++++|-.||...
T Consensus 83 id~lv~~Ag~~~ 94 (259)
T 4e6p_A 83 LDILVNNAALFD 94 (259)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCcCC
Confidence 899999998753
No 447
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=36.50 E-value=94 Score=24.08 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=36.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCCchHHHHHHHHHhh--
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS------------------------PHQNRKGALSYALSAKE-- 165 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS------------------------AHRtPe~l~ey~k~ae~-- 165 (185)
+.++++|+|..|.--+...+++.|-+-|. ++.+++ =-..++.+.++++...+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45688888887333455666666666663 333322 11223444444443322
Q ss_pred CCCeEEEEecCcc
Q 029926 166 RGIKIIIVGDGVE 178 (185)
Q Consensus 166 ~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 85 g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 85 GGLDYLVHAIAFA 97 (261)
T ss_dssp SSEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 2579999999865
No 448
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=36.46 E-value=1.4e+02 Score=22.83 Aligned_cols=62 Identities=11% Similarity=0.117 Sum_probs=36.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC-------------------------chHHHHHHHHHhh
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN-------------------------RKGALSYALSAKE 165 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt-------------------------Pe~l~ey~k~ae~ 165 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|+ ++.+.++++...+
T Consensus 5 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 5 LKDKLAVITGGAN--GIGRAIAERFAVEGA--DIAIA--DLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE--cCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 3456888888876 455666666666663 33332 233 3444444443322
Q ss_pred --CCCeEEEEecCcc
Q 029926 166 --RGIKIIIVGDGVE 178 (185)
Q Consensus 166 --~GikVIIAvAG~A 178 (185)
.+++++|-.||..
T Consensus 79 ~~g~id~lv~nAg~~ 93 (249)
T 2ew8_A 79 TFGRCDILVNNAGIY 93 (249)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 3689999999864
No 449
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=36.41 E-value=1.2e+02 Score=23.53 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=45.1
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCe--------------------eEEEEcCCCCchHHHHHHHHHhh--CCCeEEE
Q 029926 115 VGIIMESDSDLPVMNDAARTLSDFGVPY--------------------EIKILSPHQNRKGALSYALSAKE--RGIKIII 172 (185)
Q Consensus 115 VaIIMGS~SDl~vmekA~~vLeefGIpy--------------------EvrVaSAHRtPe~l~ey~k~ae~--~GikVII 172 (185)
-.++.|.-+-...++.....|..+|++. -+-++|.-....++.+.++.+++ +|++|+.
T Consensus 61 ~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~ 140 (220)
T 3etn_A 61 KLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIV 140 (220)
T ss_dssp CEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEE
Confidence 3456666666889999999999999864 24566777778889999999999 9987753
No 450
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=36.23 E-value=1.3e+02 Score=22.44 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=7.5
Q ss_pred CCeEEEEecCcc
Q 029926 167 GIKIIIVGDGVE 178 (185)
Q Consensus 167 GikVIIAvAG~A 178 (185)
+++++|-.||..
T Consensus 83 ~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 83 RIDILVNNAGIT 94 (247)
T ss_dssp CCCEEEECC---
T ss_pred CCCEEEECCCCC
Confidence 678888888864
No 451
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=36.21 E-value=1.5e+02 Score=22.83 Aligned_cols=61 Identities=8% Similarity=0.060 Sum_probs=37.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCc-----------------------hHHHHHHHHHhh--CC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR-----------------------KGALSYALSAKE--RG 167 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtP-----------------------e~l~ey~k~ae~--~G 167 (185)
.++++|+|..+ -+...+++.|-+-|- .+.++ .|++ +.+.++++...+ .+
T Consensus 2 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 2 NRGVIVTGGGH--GIGKQICLDFLEAGD--KVCFI--DIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 36888888887 456677777777774 33332 3443 444455544332 36
Q ss_pred CeEEEEecCccC
Q 029926 168 IKIIIVGDGVEA 179 (185)
Q Consensus 168 ikVIIAvAG~AA 179 (185)
++++|-.||...
T Consensus 76 id~lv~nAg~~~ 87 (247)
T 3dii_A 76 IDVLVNNACRGS 87 (247)
T ss_dssp CCEEEECCC-CC
T ss_pred CCEEEECCCCCC
Confidence 899999998753
No 452
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=36.16 E-value=67 Score=24.72 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
.+.+.++++.+..+++|.++-+. |-..+.+.++.+.+++.|+++.|
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~----~p~~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIVG----VPNYELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEE----EECGGGHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEe----cCCHHHHHHHHHHHHHcCCEEEE
Confidence 57888889999999999886542 32357777788888787777654
No 453
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=36.09 E-value=52 Score=28.45 Aligned_cols=51 Identities=16% Similarity=0.192 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------e-------------------E-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------E-------------------I-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------E-------------------v-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. + . .|-+.-=+.++++++++++.++|++||+=
T Consensus 40 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD 117 (484)
T 2aaa_A 40 GSWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVD 117 (484)
T ss_dssp CCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 56777766678999999852 1 1 12222235799999999999999999974
No 454
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=36.04 E-value=1.2e+02 Score=22.54 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCeeEEEE-cCC--CCchHHHHHHHHHhhCCC
Q 029926 126 PVMNDAARTLSDFGVPYEIKIL-SPH--QNRKGALSYALSAKERGI 168 (185)
Q Consensus 126 ~vmekA~~vLeefGIpyEvrVa-SAH--RtPe~l~ey~k~ae~~Gi 168 (185)
+.+.++.+.|.+.|+++.++.. ... -+++++.++++.+++-|.
T Consensus 147 ~~~~~~i~~l~~~g~~v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 147 HRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcCC
Confidence 5566677777777777655532 221 245667777766666553
No 455
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=36.00 E-value=91 Score=24.03 Aligned_cols=60 Identities=15% Similarity=0.044 Sum_probs=38.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh-CCCeeEE-EEcCC-------------CCchHHHHHHHHHhhCCCeEEEEe
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDF-GVPYEIK-ILSPH-------------QNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeef-GIpyEvr-VaSAH-------------RtPe~l~ey~k~ae~~GikVIIAv 174 (185)
.+|.+|.||...-..-.+..+.+.+. .-.+++. ++..+ ..|+.+.++.+..++ ++.||-+
T Consensus 5 mkil~I~GS~r~~s~t~~l~~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~--AD~iv~~ 79 (193)
T 3svl_A 5 LQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQ--ADGVVIV 79 (193)
T ss_dssp EEEEEEECCCSTTCHHHHHHHHGGGTSCTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHH--SSEEEEE
T ss_pred CEEEEEEccCCCCCHHHHHHHHHHHHccCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHH--CCEEEEE
Confidence 47999999988766666666666543 2235666 55543 236777788877766 4455444
No 456
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=35.99 E-value=65 Score=23.83 Aligned_cols=25 Identities=32% Similarity=0.283 Sum_probs=17.2
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHh
Q 029926 114 IVGIIMESDS----DLPVMNDAARTLSDF 138 (185)
Q Consensus 114 kVaIIMGS~S----Dl~vmekA~~vLeef 138 (185)
+|.||.||.. =...++.+.+.|++-
T Consensus 2 kilii~gS~r~~~~t~~la~~~~~~l~~~ 30 (191)
T 1t0i_A 2 KVGIIMGSVRAKRVCPEIAAYVKRTIENS 30 (191)
T ss_dssp EEEEEECCCCSSCSHHHHHHHHHHHHHTC
T ss_pred eEEEEeCCCCCCCchHHHHHHHHHHHHHh
Confidence 6999999964 244556666666654
No 457
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=35.93 E-value=95 Score=27.66 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=42.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHh----------h---CCCeEEEEecCc
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK----------E---RGIKIIIVGDGV 177 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae----------~---~GikVIIAvAG~ 177 (185)
..+.++|+|+ + ...+.++..|.+.|. ++.|+ -|++++.+++++... + ..++++|-.||.
T Consensus 363 ~~k~vlV~Ga-G--Gig~aia~~L~~~G~--~V~i~--~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agv 434 (523)
T 2o7s_A 363 ASKTVVVIGA-G--GAGKALAYGAKEKGA--KVVIA--NRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSM 434 (523)
T ss_dssp ---CEEEECC-S--HHHHHHHHHHHHHCC---CEEE--ESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSST
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCC
Confidence 3467889998 4 899999999999996 45554 599999888876531 1 136999998885
No 458
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=35.91 E-value=1.4e+02 Score=22.60 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=16.5
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCccC
Q 029926 152 NRKGALSYALSAKE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 152 tPe~l~ey~k~ae~--~GikVIIAvAG~AA 179 (185)
.++.+.++++...+ .+++++|-.||...
T Consensus 68 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 68 VESDVINLVQSAIKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 34444454443322 26899999988653
No 459
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=35.78 E-value=85 Score=24.84 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=46.8
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCee-EEEEcCCCCchHHHHHHHHHh--hCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAK--ERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIpyE-vrVaSAHRtPe~l~ey~k~ae--~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|.+++ ++|-+|-=.|-....++++.. ...++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG 81 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALG 81 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEee
Confidence 5799999998888 778899999999995553 456667777777776665321 14588888753
No 460
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=35.77 E-value=1.1e+02 Score=23.28 Aligned_cols=62 Identities=18% Similarity=0.297 Sum_probs=37.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHH---------------------h-hCCCe
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA---------------------K-ERGIK 169 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~a---------------------e-~~Gik 169 (185)
..+..+|+|..+- +...+++.|-+-|. . |+-.-|+++.+.+..+.. + ..+++
T Consensus 13 ~~k~vlVTGas~g--IG~~~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 13 TGKTSLITGASSG--IGSAIARLLHKLGS--K--VIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp TTCEEEETTTTSH--HHHHHHHHHHHTTC--E--EEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCEEEEECCCCh--HHHHHHHHHHHCCC--E--EEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4568999999874 56677777777774 3 333446666655543321 1 12578
Q ss_pred EEEEecCccC
Q 029926 170 IIIVGDGVEA 179 (185)
Q Consensus 170 VIIAvAG~AA 179 (185)
++|-.||...
T Consensus 87 ~li~~Ag~~~ 96 (249)
T 3f9i_A 87 ILVCNAGITS 96 (249)
T ss_dssp EEEECCC---
T ss_pred EEEECCCCCC
Confidence 9998888643
No 461
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=35.72 E-value=28 Score=28.36 Aligned_cols=101 Identities=7% Similarity=-0.002 Sum_probs=43.0
Q ss_pred eeeceeeeeccccchhhhhhhhhhhcCCCceeeec-cCCCCCCCCCeEEEEeccCCCH--HHHHHHHHHHHHhCCCeeEE
Q 029926 69 SQGTIPVLASSNGSATSTRKDYSSVREPSTVFEEE-NANGDSTDTPIVGIIMESDSDL--PVMNDAARTLSDFGVPYEIK 145 (185)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~e-a~~~~~~~~~kVaIIMGS~SDl--~vmekA~~vLeefGIpyEvr 145 (185)
..-+||.|..+.. + +.+..|.-...|+ +.+- +..+..-.-.+|+||. ++|+ ..++...+.+++.|+.....
T Consensus 81 ~~~~ip~is~~~~-~-~~~~~~~~~~~p~--~~~a~~~~~~~~gw~~vaii~--d~~~g~~~~~~~~~~~~~~g~~v~~~ 154 (376)
T 3hsy_A 81 GTLHVSFITPSFP-T-DGTHPFVIQMRPD--LKGALLSLIEYYQWDKFAYLY--DSDRGLSTLQAVLDSAAEKKWQVTAI 154 (376)
T ss_dssp HHHTCEEEECSCC-C-CSCCTTEEECSCC--CHHHHHHHHHHTTCCEEEEEE--CSTTCSHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCcCceeecCCC-C-cccCCceEEeCcc--HHHHHHHHHHhcCCCEEEEEE--eCchhHHHHHHHHHHhhhcCCeEEEE
Confidence 3457898875542 2 3444444433443 1000 0000111225799998 3454 56777788888899865433
Q ss_pred EE-cCC--CCchHHHHHHHHHhhCCCeEEEEec
Q 029926 146 IL-SPH--QNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 146 Va-SAH--RtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.. ... ........+++..++.+.+|||...
T Consensus 155 ~~~~~~~~~~~~d~~~~l~~i~~~~~~vii~~~ 187 (376)
T 3hsy_A 155 NVGNINNDKKDETYRSLFQDLELKKERRVILDC 187 (376)
T ss_dssp ECTTCC--------------------CEEEEES
T ss_pred EeccccccccchhHHHHHHHHhhCCCeEEEEEC
Confidence 32 111 1124555566666666677776643
No 462
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=35.62 E-value=1.5e+02 Score=22.81 Aligned_cols=63 Identities=6% Similarity=0.094 Sum_probs=38.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC---------------------chHHHHHHHHHh--hCC
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN---------------------RKGALSYALSAK--ERG 167 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRt---------------------Pe~l~ey~k~ae--~~G 167 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|+ ++.+.++++... -.+
T Consensus 4 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 4 FAGKGVLVTGGAR--GIGRAIAQAFAREGA--LVALC--DLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEE--eCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 3457889999887 456677777777774 34333 233 333444444332 236
Q ss_pred CeEEEEecCccC
Q 029926 168 IKIIIVGDGVEA 179 (185)
Q Consensus 168 ikVIIAvAG~AA 179 (185)
++++|-.||...
T Consensus 78 iD~lv~~Ag~~~ 89 (256)
T 2d1y_A 78 VDVLVNNAAIAA 89 (256)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 899999999753
No 463
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=35.57 E-value=1.1e+02 Score=25.47 Aligned_cols=62 Identities=11% Similarity=0.016 Sum_probs=44.5
Q ss_pred eEEEEeccCCCHH--------------HHHHHHHHHHHhCCCeeEEEEcCCCC-chHHHHHHHHHhhCCCeEEEEecCc
Q 029926 114 IVGIIMESDSDLP--------------VMNDAARTLSDFGVPYEIKILSPHQN-RKGALSYALSAKERGIKIIIVGDGV 177 (185)
Q Consensus 114 kVaIIMGS~SDl~--------------vmekA~~vLeefGIpyEvrVaSAHRt-Pe~l~ey~k~ae~~GikVIIAvAG~ 177 (185)
.|. +..|.||.- .++++.+..++.|....+..--++|+ |+.+.++++.+.+-|++. |..+..
T Consensus 96 ~v~-i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~-i~l~DT 172 (293)
T 3ewb_X 96 QIH-IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATV-INIPDT 172 (293)
T ss_dssp EEE-EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred EEE-EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCE-EEecCC
Confidence 455 456788875 36677778889998877766666665 566889999998888875 444433
No 464
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=35.42 E-value=81 Score=23.88 Aligned_cols=65 Identities=18% Similarity=0.109 Sum_probs=39.3
Q ss_pred CeEEEEeccCC-------CHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhC-CCeEEEEecCccC
Q 029926 113 PIVGIIMESDS-------DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEA 179 (185)
Q Consensus 113 ~kVaIIMGS~S-------Dl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~-GikVIIAvAG~AA 179 (185)
++|+||+=|+. |-. ..-....|+++|+......+ .--.++.+.+-++++-++ +++++|.-.|.+.
T Consensus 2 ~~v~Ii~tGdEl~~G~i~D~n-~~~l~~~l~~~G~~v~~~~i-v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 2 FRVGILTVSDKGFRGERQDTT-HLAIREVLAGGPFEVAAYEL-VPDEPPMIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp EEEEEEEECHHHHHTSSCCCH-HHHHHHHHTTSSEEEEEEEE-ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred cEEEEEEEcCcccCCCcccch-HHHHHHHHHHCCCeEeEEEE-cCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 46777764332 322 23466778899976432222 224566677766666553 6899998888753
No 465
>3pam_A Transmembrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.31A {Bartonella henselae}
Probab=35.41 E-value=98 Score=23.85 Aligned_cols=56 Identities=20% Similarity=0.134 Sum_probs=38.7
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
.+-++..+.....+++-+.+.|+++||..++.... ...|.+...+..+++++..-+
T Consensus 130 ~l~~~~~~~~~~~~a~~iq~~l~~iGI~v~i~~~~-------~~~~~~~~~~~~~d~~~~~w~ 185 (259)
T 3pam_A 130 QFEIMTQSLEEEKVALAFQSNLSRLGIHAEIRTVD-------DSQYQNRLGMFNYDMIIGKLK 185 (259)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHTTTCEEEEEECC-------HHHHHHHHHHTCCSEEEEEEC
T ss_pred EEEEEeCCchHHHHHHHHHHHHHHcCCEEEEEecC-------HHHHHHHHhcCCeeEEEeccC
Confidence 46666665445567888899999999998888764 234444445667888887544
No 466
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=35.38 E-value=94 Score=24.10 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCC------chHHHHHHHHHhhCCCeEEEEec
Q 029926 124 DLPVMNDAARTLSDFGVPYEIKILSPHQN------RKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpyEvrVaSAHRt------Pe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+.++++..+.|++.|+.+++... |+ -..+.+-++.+.+.++++||.+=
T Consensus 31 ~l~ia~~l~~~L~~~G~~V~v~lt---R~d~~~~~~~~L~~R~~~An~~~aDlfISIH 85 (180)
T 3qay_A 31 NKSLAPVLADTFRKEGHKVDVIIC---PEKQFKTKNEEKSYKIPRVNSGGYDLLIELH 85 (180)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECC---CSSCCSSTTHHHHHHHHHHHHSCCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCcceEEEC---CCCCccccccCHHHHHHHHHhcCCCEEEEee
Confidence 377899999999999975433222 32 12466666777788899999873
No 467
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=35.19 E-value=59 Score=30.00 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. +. .|-+..=++++++++++++.++|++||+=
T Consensus 262 Gdl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD 331 (696)
T 4aee_A 262 GDLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLD 331 (696)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEe
Confidence 47888888889999999963 22 23334457899999999999999999973
No 468
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=35.04 E-value=49 Score=27.89 Aligned_cols=44 Identities=16% Similarity=0.176 Sum_probs=33.2
Q ss_pred HHHHHHHhCCCe-eEEEE----cCCCCchHHHHHHHHHhhCCCeEEEEe
Q 029926 131 AARTLSDFGVPY-EIKIL----SPHQNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 131 A~~vLeefGIpy-EvrVa----SAHRtPe~l~ey~k~ae~~GikVIIAv 174 (185)
..++|+++|+++ .+||- .-+=..+.+.+.++.+++.|.+|++-.
T Consensus 32 ~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 32 LETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp HHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 468889999984 55553 223446778888899999999999974
No 469
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=35.03 E-value=1.4e+02 Score=22.35 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=16.6
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCccC
Q 029926 152 NRKGALSYALSAKE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 152 tPe~l~ey~k~ae~--~GikVIIAvAG~AA 179 (185)
.++.+.+..+...+ .+++++|-.||...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 71 SEQELSALADFAISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 34455555443322 36899998888654
No 470
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=34.98 E-value=76 Score=28.20 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------------------EI-KILSPHQNRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVII 172 (185)
-|+.-+.+-.+-|+++||.. +. .|-+..=++++++++++.+.++|++||+
T Consensus 28 Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vil 97 (555)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVIL 97 (555)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 58888877789999999952 22 2333344688999999999999999986
No 471
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=34.97 E-value=1.2e+02 Score=22.62 Aligned_cols=32 Identities=16% Similarity=0.267 Sum_probs=25.4
Q ss_pred EEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 144 IKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 144 vrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
+-++|.-+...++.+.++.++++|+++| ++.+
T Consensus 117 vI~iS~SG~t~~~i~~~~~ak~~g~~vI-~IT~ 148 (199)
T 1x92_A 117 LLAISTSGNSANVIQAIQAAHDREMLVV-ALTG 148 (199)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHTTCEEE-EEEC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHCCCEEE-EEEC
Confidence 5678888888899999999999998764 4444
No 472
>3r8s_F 50S ribosomal protein L5; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3j19_F* 3oat_F* 3ofc_F* 3ofz_F* 3ofr_F 3r8t_F 3i1n_F 1vs8_F 1vs6_F 1vt2_F 3i1p_F 3i1r_F 3i1t_F 3i20_F 3i22_F 3iyx_F 3iyy_F 3izt_G* 3izu_G* 3kcr_F ...
Probab=34.90 E-value=32 Score=27.88 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=30.0
Q ss_pred cCCCceeeeccCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCe
Q 029926 94 REPSTVFEEENANGDSTDTPIVGIIMESDSDLPVMNDAARTLSDFGVPY 142 (185)
Q Consensus 94 ~~p~~~~~~ea~~~~~~~~~kVaIIMGS~SDl~vmekA~~vLeefGIpy 142 (185)
.||+..|..-.+. -...|.|++...+|. +|...|..||+|+
T Consensus 136 ~FPEi~yD~~~~i----~GmdI~ivtta~td~----ea~~LL~~~g~Pf 176 (177)
T 3r8s_F 136 IFPEIDYDKVDRV----RGLDITITTTAKSDE----EGRALLAAFDFPF 176 (177)
T ss_dssp GSSSSCSSSCCSC----CCCBCEEEESCSSHH----HHHHHHHHTCCCC
T ss_pred cCCCccccccCCc----cceeEEEEeCcCCHH----HHHHHHHHcCCCc
Confidence 5888776533221 123599999999985 5889999999997
No 473
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=34.76 E-value=85 Score=25.03 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC----------------------------CCchHHHHHHHHHhhCCCeEEEEe
Q 029926 124 DLPVMNDAARTLSDFGVPYEIKILSPH----------------------------QNRKGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 124 Dl~vmekA~~vLeefGIpyEvrVaSAH----------------------------RtPe~l~ey~k~ae~~GikVIIAv 174 (185)
|.+.+++..+.++++|++ -+|+- +| ...+.+.++++.+++.|+.|++..
T Consensus 34 ~~~~~~~~l~~~k~~G~N-~vR~~-~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 34 NHADVDSTFSHISSSGLK-VVRVW-GFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp CHHHHHHHHHHHHHTTCC-EEECC-CCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEES
T ss_pred CHHHHHHHHHHHHHcCCC-EEEEc-cccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 678899999999999998 45552 11 114566788999999999999986
No 474
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=34.75 E-value=1.7e+02 Score=23.11 Aligned_cols=58 Identities=21% Similarity=0.219 Sum_probs=38.1
Q ss_pred EEEeccCCCHH---HHHHHHHHHHHhCCCeeEEEE--cCC----CCchHHHHHHHHHhhCCCeEEEE
Q 029926 116 GIIMESDSDLP---VMNDAARTLSDFGVPYEIKIL--SPH----QNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 116 aIIMGS~SDl~---vmekA~~vLeefGIpyEvrVa--SAH----RtPe~l~ey~k~ae~~GikVIIA 173 (185)
.+..|+.++.. .++++.+.++++|+++.+.+. +.| .+++...+.++.+.+.|++.+..
T Consensus 119 ~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~ 185 (273)
T 2qjg_A 119 HVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKT 185 (273)
T ss_dssp EEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEE
Confidence 56688876654 455666667788999876542 223 45666666667778888885543
No 475
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=34.64 E-value=1e+02 Score=24.10 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029926 129 NDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 181 (185)
Q Consensus 129 ekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhL 181 (185)
+++.+.+..-|++++..+..... | ...+++.+++.+++.+|.+.-+...+
T Consensus 76 ~~~~~~~~~~~v~~~~~~~~~g~-~--~~~i~~~a~~~~~DLiV~G~~g~~~~ 125 (319)
T 3olq_A 76 KQQARYYLEAGIQIDIKVIWHNR-P--YEAIIEEVITDKHDLLIKMAHQHDKL 125 (319)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSC-H--HHHHHHHHHHHTCSEEEEEEBCC--C
T ss_pred HHHHHHHhhcCCeEEEEEEecCC-h--HHHHHHHHHhcCCCEEEEecCcCchh
Confidence 33444445568988888863332 2 33455555566688888776554444
No 476
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=34.47 E-value=49 Score=24.27 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcC
Q 029926 125 LPVMNDAARTLSDFGVPYEIKILSP 149 (185)
Q Consensus 125 l~vmekA~~vLeefGIpyEvrVaSA 149 (185)
-+.+.++.-+|+..||+|+...+..
T Consensus 12 s~~~~~v~~~L~~~gi~~e~~~v~~ 36 (210)
T 3m3m_A 12 SGNCYKIKLMLNLLGLPYEWQAVDI 36 (210)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCcHHHHHHHHHHcCCCCEEEEecC
Confidence 3678999999999999999998876
No 477
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=34.45 E-value=52 Score=24.52 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=34.8
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC------CchHHHHHHHHHhh-------CC-CeEEEEecCccCc
Q 029926 120 ESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ------NRKGALSYALSAKE-------RG-IKIIIVGDGVEAH 180 (185)
Q Consensus 120 GS~SDl~vmekA~~vLeefGIpyEvrVaSAHR------tPe~l~ey~k~ae~-------~G-ikVIIAvAG~AAh 180 (185)
|-.+...++.+..+.|.+.||++|+-..|.+. ..+.+.+++++.++ ++ ..|=|.++||.++
T Consensus 27 ~m~~~~g~~~~if~~La~~~I~vd~I~~s~~~Isf~v~~~~~~~~il~~l~~~~~v~~~~~~a~vsvvG~gm~~~ 101 (157)
T 3mah_A 27 NKLLSWHFMRKLFEIFEFYQEPVDMVATSEVGVSLTIDNDKNLPDIVRALSDIGDVTVDKDMVIICIVGDMEWDN 101 (157)
T ss_dssp TTSCHHHHHHHHHHHHHHTTCCCSCEECCSSEEEEEESCCTTHHHHHHHHTTTEEEEEEEEEEEEEEEC------
T ss_pred CCCCchhHHHHHHHHHHHcCCCEEEEEecCCEEEEEECChHHHHHHHHHHhccCeEEEeCCeEEEEEECCCcccC
Confidence 33445567899999999999998877766552 22246666655432 11 2455667777643
No 478
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=34.43 E-value=1.5e+02 Score=24.48 Aligned_cols=62 Identities=11% Similarity=0.167 Sum_probs=40.0
Q ss_pred CCCCCeEEEEeccCCCHH---HHHHHHHHH----HHhCCCeeEEEEcCCCCchHH--------------HHHHHHHhhCC
Q 029926 109 STDTPIVGIIMESDSDLP---VMNDAARTL----SDFGVPYEIKILSPHQNRKGA--------------LSYALSAKERG 167 (185)
Q Consensus 109 ~~~~~kVaIIMGS~SDl~---vmekA~~vL----eefGIpyEvrVaSAHRtPe~l--------------~ey~k~ae~~G 167 (185)
+.|++.|+|| |+-+=+. .++++.+.. +...+|| .+.|.-.-|++. .+.++..++.|
T Consensus 23 ~~m~k~IGii-GGmg~~aT~~~~~~i~~~~~~~~D~~h~p~--~~~s~~~i~~r~~~~~~~g~~~~~~l~~~~~~L~~~G 99 (268)
T 3s81_A 23 NAMKHTIGIL-GGMGPAATADMLEKFVELRHASCDQQHIPL--IVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAG 99 (268)
T ss_dssp --CCCCEEEE-CCSSHHHHHHHHHHHHHHSCCSSGGGSCCE--EEEECTTSCCHHHHHHHCCCCSHHHHHHHHHHHHHTT
T ss_pred cCCCCcEEEE-ecCCHHHHHHHHHHHHHhhHhhcCCCCCCE--EEeccCCHHHHHHHHHhCCchHHHHHHHHHHHHHHcC
Confidence 4567789999 6667665 555555543 3455664 566655566666 77778888889
Q ss_pred CeEEEE
Q 029926 168 IKIIIV 173 (185)
Q Consensus 168 ikVIIA 173 (185)
++.|+.
T Consensus 100 ad~IVI 105 (268)
T 3s81_A 100 AECIVI 105 (268)
T ss_dssp CSEEEC
T ss_pred CCEEEE
Confidence 975543
No 479
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=34.22 E-value=64 Score=26.99 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCe---eE---------------EEEcCC---CCchHHHHHHHHHhhCCCeEE
Q 029926 122 DSDLPVMNDAARTLSDFGVPY---EI---------------KILSPH---QNRKGALSYALSAKERGIKII 171 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpy---Ev---------------rVaSAH---RtPe~l~ey~k~ae~~GikVI 171 (185)
.+|....+-....++.+|++| |+ -|+|.| ++|.++.++.+.+.+-|++|+
T Consensus 106 ~~~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~~~~kiI~S~Hdf~~tp~el~~~~~~~~~~GaDIv 176 (259)
T 3l9c_A 106 LSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMYDFSNLILSYHNFEETPENLMEVFSELTALAPRVV 176 (259)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGTTCSSEEEEEEESSCCCTTHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHHhcCeEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Confidence 355555555555556677765 32 478888 789988888888888776543
No 480
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=34.13 E-value=1.6e+02 Score=22.81 Aligned_cols=29 Identities=10% Similarity=0.200 Sum_probs=17.6
Q ss_pred CCchHHHHHHHHHhh--CCCeEEEEecCccC
Q 029926 151 QNRKGALSYALSAKE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 151 RtPe~l~ey~k~ae~--~GikVIIAvAG~AA 179 (185)
..++.+.+++++..+ .+++++|-.||...
T Consensus 89 ~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 89 ASESDFIEAIQTIVQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 344555555544432 36889998888643
No 481
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=34.04 E-value=1.7e+02 Score=22.84 Aligned_cols=64 Identities=22% Similarity=0.323 Sum_probs=38.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc-------------------------------------CCCCch
Q 029926 112 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS-------------------------------------PHQNRK 154 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaS-------------------------------------AHRtPe 154 (185)
+.++++|+|..+- +...+++.|-+-|.. +.+++ =-..++
T Consensus 9 ~~k~~lVTGas~g--IG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 84 (281)
T 3s55_A 9 EGKTALITGGARG--MGRSHAVALAEAGAD--IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA 84 (281)
T ss_dssp TTCEEEEETTTSH--HHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCch--HHHHHHHHHHHCCCe--EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 4578888888763 455566666666642 22222 123455
Q ss_pred HHHHHHHHHhh--CCCeEEEEecCccC
Q 029926 155 GALSYALSAKE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 155 ~l~ey~k~ae~--~GikVIIAvAG~AA 179 (185)
.+.++++...+ .+++++|-.||...
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 56666655433 36899999998753
No 482
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=33.99 E-value=73 Score=25.68 Aligned_cols=62 Identities=24% Similarity=0.227 Sum_probs=35.2
Q ss_pred CeEEEEeccCCCHHH--HHHHHHHHHHhCCC-------------ee-------EEEEcCCCCchHHHHHHHHHhhCCCeE
Q 029926 113 PIVGIIMESDSDLPV--MNDAARTLSDFGVP-------------YE-------IKILSPHQNRKGALSYALSAKERGIKI 170 (185)
Q Consensus 113 ~kVaIIMGS~SDl~v--mekA~~vLeefGIp-------------yE-------vrVaSAHRtPe~l~ey~k~ae~~GikV 170 (185)
.+|+||. +++|+.. ++...+.|++.|+. |+ ..|........++..+++..++.+.+|
T Consensus 140 ~~v~ii~-~d~~~G~~~~~~~~~~~~~~g~~v~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~d~~~~l~~i~~~~~~v 218 (384)
T 3qek_A 140 NHVILIV-SDDHEGRAAQKKLETLLEGKESKSKKRNYENLDQLSYDNKRGPKADKVLQFEPGTKNLTALLLEAKELEARV 218 (384)
T ss_dssp CEEEEEE-ESSHHHHHHHHHHHHHHC--------------CCSCCCCCCCCEEEEEEEECTTCSCCHHHHHHHHTSSCCE
T ss_pred eEEEEEE-EcCcccHHHHHHHHHHHHhccCccccccccccceeeeccccCcccceecccCCchhhHHHHHHHHHhcCCcE
Confidence 5788886 4555433 45566677777753 22 334333344456677777777788888
Q ss_pred EEEec
Q 029926 171 IIVGD 175 (185)
Q Consensus 171 IIAvA 175 (185)
||...
T Consensus 219 ii~~~ 223 (384)
T 3qek_A 219 IILSA 223 (384)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88764
No 483
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=33.92 E-value=91 Score=22.90 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=42.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHH---hCCCeeEEEEcCCCCchHHHHHHHHH-hhCCC-eEEE
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSD---FGVPYEIKILSPHQNRKGALSYALSA-KERGI-KIII 172 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLee---fGIpyEvrVaSAHRtPe~l~ey~k~a-e~~Gi-kVII 172 (185)
.|.|.+- +.=|.+++|...|++ +|++|++.=+..+-.++.+.++++.. ..+.+ .|||
T Consensus 15 ~Vvvysk--~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI 76 (127)
T 3l4n_A 15 PIIIFSK--STCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV 76 (127)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEc--CCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE
Confidence 4777765 567999999999998 48999888888887778888877543 22223 6666
No 484
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=33.85 E-value=1.2e+02 Score=25.90 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHHHHHhCCCee-EEEE----cCCC-----------CchHHHHHHHHHhhCCCeEEE
Q 029926 122 DSDLPVMNDAARTLSDFGVPYE-IKIL----SPHQ-----------NRKGALSYALSAKERGIKIII 172 (185)
Q Consensus 122 ~SDl~vmekA~~vLeefGIpyE-vrVa----SAHR-----------tPe~l~ey~k~ae~~GikVII 172 (185)
-++- .+....+.|+++|+++- +.|. ..|= +++.+.++++.+++.|.+|++
T Consensus 50 ~~~~-~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 50 WGTD-EARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp GGSH-HHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCch-hHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3443 44789999999999963 3332 1222 688899999999999999966
No 485
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=33.84 E-value=1.2e+02 Score=24.93 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=30.4
Q ss_pred CCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecC
Q 029926 139 GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 176 (185)
Q Consensus 139 GIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG 176 (185)
++|.-+++ ++.-+.++..++++.+++.|++.|++..+
T Consensus 211 ~~Pv~vKi-~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 211 YVPIAVKI-APDLSEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCCEEEEC-CSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cCceEEEe-cCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 79998885 56667778899999999999998887654
No 486
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=33.84 E-value=73 Score=25.32 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=43.9
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCC-e-eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSDFGVP-Y-EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLeefGIp-y-EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++.|++ + .++|-+|-=.|-...++++ .++.+||..
T Consensus 18 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~-----~yDavIaLG 80 (160)
T 2c92_A 18 VRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR-----NHDAVVALG 80 (160)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT-----SCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh-----cCCEEEEEe
Confidence 4799999999988 7788999999999984 3 3456667766666555553 388888753
No 487
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=33.68 E-value=1.6e+02 Score=24.06 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=40.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHh-hCCCeEEEEec
Q 029926 111 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae-~~GikVIIAvA 175 (185)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .+|+++.+.+..++.+ ..|.++.+..+
T Consensus 44 l~~k~~lVTGas~--GIG~aia~~La~~G~--~Vv~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 104 (328)
T 2qhx_A 44 PTVPVALVTGAAK--RLGRSIAEGLHAEGY--AVCLH-YHRSAAEANALSATLNARRPNSAITVQA 104 (328)
T ss_dssp -CCCEEEETTCSS--HHHHHHHHHHHHTTC--EEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred cCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE-cCCCHHHHHHHHHHHHhhcCCeEEEEEe
Confidence 3457999999987 567788888888884 33332 3489999888877654 34445544433
No 488
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=33.49 E-value=94 Score=28.08 Aligned_cols=51 Identities=12% Similarity=0.226 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 123 SDLPVMNDAARTLSDFGVPY-------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 123 SDl~vmekA~~vLeefGIpy-------------------Ev-rVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
-|+.-+.+-.+-|+++||.. +. .|-+-.=++++++++++++.++|++||+=
T Consensus 37 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD 107 (589)
T 3aj7_A 37 GDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITD 107 (589)
T ss_dssp CCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 58887777788999999952 33 33344457899999999999999999974
No 489
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=33.36 E-value=22 Score=27.17 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=39.9
Q ss_pred CCCeEEEEecc-CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 111 DTPIVGIIMES-DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 111 ~~~kVaIIMGS-~SD---l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
....|+|++.+ .++ ....+.+.+.+++.|....+. ..+..++...++++...+++++-+|...
T Consensus 10 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~--~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 76 (289)
T 3g85_A 10 SKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVV--ICPYKTDCLHLEKGISKENSFDAAIIAN 76 (289)
T ss_dssp -CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEE--EEEECTTCGGGCGGGSTTTCCSEEEESS
T ss_pred CCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEE--ecCCCchhHHHHHHHHhccCCCEEEEec
Confidence 34579999974 333 356777888889998765543 4444455555566666666777766553
No 490
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=33.20 E-value=95 Score=24.85 Aligned_cols=49 Identities=10% Similarity=0.162 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEE--cC-CCCc----------------hHHHHHHHHHhhCCCeEEEEe
Q 029926 125 LPVMNDAARTLSDFGVPYEIKIL--SP-HQNR----------------KGALSYALSAKERGIKIIIVG 174 (185)
Q Consensus 125 l~vmekA~~vLeefGIpyEvrVa--SA-HRtP----------------e~l~ey~k~ae~~GikVIIAv 174 (185)
.+.+++-.+.++++|++. +|+- .. .-.| +.+.++++.+++.|+.|++..
T Consensus 44 ~~~~~~d~~~~k~~G~N~-vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 44 KSTFESTLSDMQSHGGNS-VRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHHTTCCE-EEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHcCCCE-EEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 667888899999999984 4542 11 1112 367888999999999999975
No 491
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=33.20 E-value=86 Score=21.87 Aligned_cols=41 Identities=7% Similarity=0.162 Sum_probs=30.7
Q ss_pred HHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEE
Q 029926 132 ARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIV 173 (185)
Q Consensus 132 ~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIA 173 (185)
.+.+++.++. ++-|+.....++...++++.+.+.|++|.+.
T Consensus 58 ~~~~~~~~id-~viia~~~~~~~~~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 58 ERLIKKHCIS-TVLLAVPSASQVQKKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp HHHHHHHTCC-EEEECCTTSCHHHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHHHHcCCeEEEC
Confidence 3456677775 5556666777788889998898999998764
No 492
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=33.19 E-value=1.6e+02 Score=22.27 Aligned_cols=28 Identities=18% Similarity=0.264 Sum_probs=16.3
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCccC
Q 029926 152 NRKGALSYALSAKE--RGIKIIIVGDGVEA 179 (185)
Q Consensus 152 tPe~l~ey~k~ae~--~GikVIIAvAG~AA 179 (185)
.++.+.+.++...+ .+++++|-.||...
T Consensus 73 ~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 73 NTESVQNAVRSVHEQEGRVDILVACAGICI 102 (260)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 34444454443322 36889999888643
No 493
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=33.11 E-value=1.3e+02 Score=23.20 Aligned_cols=65 Identities=5% Similarity=-0.018 Sum_probs=45.1
Q ss_pred CCeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHh--hCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK--ERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SD--l~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae--~~GikVIIAvAG 176 (185)
..+|+++.|.... ..-.+.-.+.|++.|++++..+....-+++...+.++..- ....+.|++...
T Consensus 126 ~~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d 194 (289)
T 3k9c_A 126 HRNIAHIDGADAPGGADRRAGFLAAMDRHGLSASATVVTGGTTETEGAEGMHTLLEMPTPPTAVVAFND 194 (289)
T ss_dssp CCSEEEECCTTSTTHHHHHHHHHHHHHHTTCGGGEEEECCCSSHHHHHHHHHHHHTSSSCCSEEEESSH
T ss_pred CCcEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCccEEECCCCHHHHHHHHHHHHcCCCCCCEEEECCh
Confidence 3579999997644 2335566778899999987677777777777666665442 345788888654
No 494
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=33.08 E-value=51 Score=25.36 Aligned_cols=53 Identities=19% Similarity=0.247 Sum_probs=34.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEE
Q 029926 114 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKII 171 (185)
Q Consensus 114 kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVI 171 (185)
.|-+.+- +.=+.+++|...|++.||+|+..-+..+ |+. +++.+.....++-++
T Consensus 171 ~i~ly~~--~~Cp~C~~a~~~L~~~~i~~~~~~i~~~--~~~-~~l~~~~g~~~vP~~ 223 (241)
T 1nm3_A 171 SISIFTK--PGCPFCAKAKQLLHDKGLSFEEIILGHD--ATI-VSVRAVSGRTTVPQV 223 (241)
T ss_dssp CEEEEEC--SSCHHHHHHHHHHHHHTCCCEEEETTTT--CCH-HHHHHHTCCSSSCEE
T ss_pred eEEEEEC--CCChHHHHHHHHHHHcCCceEEEECCCc--hHH-HHHHHHhCCCCcCEE
Confidence 3555543 4569999999999999999988777654 332 344433333445343
No 495
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=33.02 E-value=1e+02 Score=23.54 Aligned_cols=63 Identities=13% Similarity=-0.019 Sum_probs=39.4
Q ss_pred CCeEEEEeccCCCHH---HHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHH--H-h-hCCCeEEEEecC
Q 029926 112 TPIVGIIMESDSDLP---VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALS--A-K-ERGIKIIIVGDG 176 (185)
Q Consensus 112 ~~kVaIIMGS~SDl~---vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~--a-e-~~GikVIIAvAG 176 (185)
..+|++|.|...+.. -.+...+.|++.|++++ +....-+++...+.+++ . + ...++.|++...
T Consensus 124 ~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d 193 (285)
T 3c3k_A 124 KKRIALINHDLAYQYAQHRESGYLNRLKFHGLDYS--RISYAENLDYMAGKLATFSLLKSAVKPDAIFAISD 193 (285)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHHHHHHTCCCC--EEEECSSSSHHHHHHHHHHHHSSSSCCSEEEESSH
T ss_pred CCeEEEEeCCCccccHHHHHHHHHHHHHHcCCCce--EeecCCChHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 357999999765433 34456678889999877 33334455555555544 3 2 235788888654
No 496
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=32.96 E-value=1.7e+02 Score=22.93 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=29.2
Q ss_pred HHHHHHHHHHh-----CCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029926 128 MNDAARTLSDF-----GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 182 (185)
Q Consensus 128 mekA~~vLeef-----GIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLP 182 (185)
++++.+.+++. |++++..+..- .| ...+.+.++ +++.||.++-+...+.
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~g--~~--~~~I~~~a~--~~DliV~G~~g~~~~~ 137 (309)
T 3cis_A 84 IDDALKVVEQASLRAGPPTVHSEIVPA--AA--VPTLVDMSK--DAVLMVVGCLGSGRWP 137 (309)
T ss_dssp HHHHHHHHHHHCSSSCCSCEEEEEESS--CH--HHHHHHHGG--GEEEEEEESSCTTCCT
T ss_pred HHHHHHHHHHhcccCCCceEEEEEecC--CH--HHHHHHHhc--CCCEEEECCCCCcccc
Confidence 44555556665 88888877632 22 344455444 5888888876554443
No 497
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=32.89 E-value=88 Score=25.00 Aligned_cols=64 Identities=17% Similarity=0.167 Sum_probs=44.2
Q ss_pred CeEEEEe---ccCCCH---HHHHHHHHHHHHh-----CCCeeEEEEcCCCCchHHHHHHHHHhh-CCCeEEEEecC
Q 029926 113 PIVGIIM---ESDSDL---PVMNDAARTLSDF-----GVPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDG 176 (185)
Q Consensus 113 ~kVaIIM---GS~SDl---~vmekA~~vLeef-----GIpyEvrVaSAHRtPe~l~ey~k~ae~-~GikVIIAvAG 176 (185)
-+|+++. |..+++ +..+.+...+++. |.++++.+.-..-.|+...+.++..-+ +++.+||...+
T Consensus 7 i~IG~~~p~sg~~a~~~g~~~~~g~~~a~~~i~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~ 82 (379)
T 3n0w_A 7 VTLGVLTDMSSVYADSAGKGSVAAVQLAIEDVGGKALGQPVKLVSADYQMKTDVALSIAREWFDRDGVDAIFDVVN 82 (379)
T ss_dssp CEEEEEECSSSTTTTTSHHHHHHHHHHHHHHTTTEETTEECEEEEEECTTCHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEEEeCCccccccccCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHHhCCceEEEcCCC
Confidence 3677775 455543 3455555566775 455788888888899998888877654 78888887554
No 498
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=32.84 E-value=96 Score=24.65 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=45.4
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHH-hCCCe----eEEEEcCCCCchHHHHHHHHHhhCCCeEEEEec
Q 029926 113 PIVGIIMESDSDL---PVMNDAARTLSD-FGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 175 (185)
Q Consensus 113 ~kVaIIMGS~SDl---~vmekA~~vLee-fGIpy----EvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvA 175 (185)
.+|+|+.+.-.+. .-.+.|.+.|++ .|++- .++|-+|-=.|-...++++ ...++.+||..
T Consensus 18 ~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 85 (159)
T 1kz1_A 18 LRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRASIA---RNTYDAVIGIG 85 (159)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSGGGHHHHHHHHHH---HSCCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 4799999998888 778899999999 99862 3455567666766666654 45689888753
No 499
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=32.78 E-value=2e+02 Score=23.94 Aligned_cols=68 Identities=7% Similarity=-0.050 Sum_probs=46.3
Q ss_pred CCCeEEEEeccC-CCHHHHHHHHHHHHH--hCCCeeEEEEc-CCC-------C-chHHHHHHHHHhhCCCeEEEEecCcc
Q 029926 111 DTPIVGIIMESD-SDLPVMNDAARTLSD--FGVPYEIKILS-PHQ-------N-RKGALSYALSAKERGIKIIIVGDGVE 178 (185)
Q Consensus 111 ~~~kVaIIMGS~-SDl~vmekA~~vLee--fGIpyEvrVaS-AHR-------t-Pe~l~ey~k~ae~~GikVIIAvAG~A 178 (185)
|..+|+||.=|. -|.+..+.+.+.|+. +|. ++.+-. +.+ + -+++.++.+...+..++.|+++-|+-
T Consensus 2 ~~~~I~ivaPSs~~~~~~~~~~~~~l~~~~~G~--~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy 79 (274)
T 3g23_A 2 MTRRIAICAPSTPFTREDSARVIALAAAEFPDL--SLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGY 79 (274)
T ss_dssp CCEEEEEECSSSCCCHHHHHHHHHHHHHHCTTE--EEEECGGGGCCSSSSSSCHHHHHHHHHHHHTCTTCSEEEESCCSS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHhccCCe--EEEECcchhhccCccCCCHHHHHHHHHHHhhCCCCCEEEEeeccc
Confidence 345799997443 366778888888887 574 444431 112 1 25677777777888899999999985
Q ss_pred Cc
Q 029926 179 AH 180 (185)
Q Consensus 179 Ah 180 (185)
+.
T Consensus 80 ga 81 (274)
T 3g23_A 80 GA 81 (274)
T ss_dssp CT
T ss_pred cH
Confidence 43
No 500
>1no5_A Hypothetical protein HI0073; structural genomics, nucleotidyl transferase structure 2 function project, S2F, unknown function; 1.80A {Haemophilus influenzae} SCOP: d.218.1.5
Probab=32.75 E-value=1.3e+02 Score=21.20 Aligned_cols=66 Identities=12% Similarity=0.132 Sum_probs=34.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCchHHHHHHHHHhhCCCeEEEEecCccCcCcC
Q 029926 113 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSG 183 (185)
Q Consensus 113 ~kVaIIMGS~SDl~vmekA~~vLeefGIpyEvrVaSAHRtPe~l~ey~k~ae~~GikVIIAvAG~AAhLPG 183 (185)
-.++|+....-+.....+....|++.+.++.+.++.....|..+ ..+....|. .|-....+=+-||
T Consensus 47 IDl~V~~~~~~~~~~~~~l~~~l~~~~~~~~vDlv~~~~~~~~~---~~~I~~eg~--~ly~~~~~~~~~~ 112 (114)
T 1no5_A 47 LDLAIISEEPLDFLARDRLKEAFSESDLPWRVDLLDWATTSEDF---REIIRKVYV--VIQEKEKTVEKPT 112 (114)
T ss_dssp EEEEEECSSCCCHHHHHHHHHHHHHSCCSSCEEEEEGGGSCHHH---HHHHHHSCE--EEECCC-------
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHhcCCCCcEeEEEccCCCHHH---HHHHHhceE--EEEECCccccCCC
Confidence 45888887656665556677778876555555555544455444 344445543 3344444444444
Done!