Your job contains 1 sequence.
>029928
MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT
HTQAMHAHSSVAVGMKGASKAMAAMNKQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTID
DALDNDEAEEETEELTNQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA
ALRNP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029928
(185 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024107 - symbol:VPS2.3 "vacuolar protein sort... 624 5.5e-61 1
TAIR|locus:2163396 - symbol:VPS2.2 species:3702 "Arabidop... 504 2.9e-48 1
UNIPROTKB|F1NR65 - symbol:CHMP2B "Charged multivesicular ... 276 4.2e-24 1
ZFIN|ZDB-GENE-040426-2539 - symbol:chmp2bb "chromatin mod... 275 5.3e-24 1
UNIPROTKB|Q5F3A2 - symbol:CHMP2B "Charged multivesicular ... 273 8.7e-24 1
TAIR|locus:2054612 - symbol:VPS2.1 species:3702 "Arabidop... 266 4.8e-23 1
UNIPROTKB|Q9UQN3 - symbol:CHMP2B "Charged multivesicular ... 262 1.3e-22 1
UNIPROTKB|E2R417 - symbol:CHMP2B "Uncharacterized protein... 259 2.6e-22 1
UNIPROTKB|F2Z5Q1 - symbol:CHMP2B "Uncharacterized protein... 259 2.6e-22 1
MGI|MGI:1916192 - symbol:Chmp2b "charged multivesicular b... 259 2.6e-22 1
UNIPROTKB|Q3SX42 - symbol:CHMP2B "Charged multivesicular ... 256 5.5e-22 1
ZFIN|ZDB-GENE-070628-3 - symbol:chmp2ba "chromatin modify... 245 8.0e-21 1
UNIPROTKB|C9J0A7 - symbol:CHMP2B "Charged multivesicular ... 148 1.7e-20 2
DICTYBASE|DDB_G0292400 - symbol:vps2B "SNF7 family protei... 236 7.2e-20 1
ZFIN|ZDB-GENE-040426-2922 - symbol:bc2 "putative breast a... 231 2.5e-19 1
UNIPROTKB|E2RIU2 - symbol:CHMP2A "Uncharacterized protein... 230 3.1e-19 1
UNIPROTKB|Q3T0U5 - symbol:CHMP2A "Chromatin modifying pro... 226 8.3e-19 1
UNIPROTKB|O43633 - symbol:CHMP2A "Charged multivesicular ... 226 8.3e-19 1
MGI|MGI:1916203 - symbol:Chmp2a "charged multivesicular b... 222 2.2e-18 1
RGD|1305050 - symbol:Chmp2a "charged multivesicular body ... 222 2.2e-18 1
UNIPROTKB|Q5ZHN1 - symbol:CHMP2A "Charged multivesicular ... 221 2.8e-18 1
WB|WBGene00007216 - symbol:C01A2.4 species:6239 "Caenorha... 218 5.8e-18 1
FB|FBgn0035589 - symbol:CHMP2B "Charged multivesicular bo... 217 7.5e-18 1
ASPGD|ASPL0000001940 - symbol:AN6898 species:162425 "Emer... 209 5.3e-17 1
FB|FBgn0039402 - symbol:vps2 "vps2" species:7227 "Drosoph... 207 8.6e-17 1
CGD|CAL0003689 - symbol:VPS2 species:5476 "Candida albica... 203 2.3e-16 1
UNIPROTKB|Q5A501 - symbol:VPS2 "Putative uncharacterized ... 203 2.3e-16 1
POMBASE|SPAC4F8.01 - symbol:did4 "ESCRT III complex subun... 202 2.9e-16 1
SGD|S000001485 - symbol:DID4 "Class E Vps protein of the ... 199 6.0e-16 1
WB|WBGene00012903 - symbol:vps-2 species:6239 "Caenorhabd... 193 2.6e-15 1
UNIPROTKB|I3LSS2 - symbol:CHMP2A "Uncharacterized protein... 172 4.4e-13 1
DICTYBASE|DDB_G0290087 - symbol:vps2A "SNF7 family protei... 166 1.9e-12 1
UNIPROTKB|Q5E994 - symbol:CHMP1B "Charged multivesicular ... 164 3.1e-12 1
MGI|MGI:1920159 - symbol:Chmp1a "charged multivesicular b... 164 3.1e-12 1
RGD|1311083 - symbol:Chmp1a "charged multivesicular body ... 164 3.1e-12 1
UNIPROTKB|Q7LBR1 - symbol:CHMP1B "Charged multivesicular ... 163 3.9e-12 1
RGD|1593500 - symbol:Chmp1b "charged multivesicular body ... 163 3.9e-12 1
UNIPROTKB|F1NVQ6 - symbol:CHMP1B "Charged multivesicular ... 162 5.0e-12 1
UNIPROTKB|Q32KR9 - symbol:CHMP1A "Uncharacterized protein... 162 5.0e-12 1
UNIPROTKB|I3LU89 - symbol:CHMP1A "Uncharacterized protein... 162 5.0e-12 1
MGI|MGI:1914314 - symbol:Chmp1b "charged multivesicular b... 161 6.4e-12 1
UNIPROTKB|E1BZL2 - symbol:CHMP1A "Uncharacterized protein... 160 8.2e-12 1
UNIPROTKB|F1NPS5 - symbol:CHMP1A "Uncharacterized protein... 160 8.2e-12 1
UNIPROTKB|Q9HD42 - symbol:CHMP1A "Charged multivesicular ... 160 8.2e-12 1
MGI|MGI:1914278 - symbol:2610002M06Rik "RIKEN cDNA 261000... 159 1.0e-11 1
RGD|1566265 - symbol:RGD1566265 "similar to RIKEN cDNA 26... 159 1.0e-11 1
ZFIN|ZDB-GENE-040426-1474 - symbol:chmp1a "chromatin modi... 159 1.0e-11 1
UNIPROTKB|E2RTK6 - symbol:CHMP1A "Uncharacterized protein... 158 1.3e-11 1
UNIPROTKB|Q5ZKX1 - symbol:CHMP1B "Charged multivesicular ... 157 1.7e-11 1
ZFIN|ZDB-GENE-030131-8370 - symbol:chmp1b "chromatin modi... 156 2.2e-11 1
RGD|1306781 - symbol:Chmp2b "charged multivesicular body ... 148 1.5e-10 1
FB|FBgn0036805 - symbol:Chmp1 "Chmp1" species:7227 "Droso... 143 5.2e-10 1
DICTYBASE|DDB_G0267394 - symbol:vps46 "SNF7 family protei... 140 1.1e-09 1
UNIPROTKB|F8VVT7 - symbol:CHMP1A "Charged multivesicular ... 140 1.1e-09 1
UNIPROTKB|Q58CS7 - symbol:CHMP3 "Charged multivesicular b... 138 1.8e-09 1
TAIR|locus:2172686 - symbol:VPS24.1 species:3702 "Arabido... 138 2.2e-09 1
UNIPROTKB|Q9Y3E7 - symbol:CHMP3 "Charged multivesicular b... 137 2.4e-09 1
ZFIN|ZDB-GENE-040426-2600 - symbol:chmp3 "charged multive... 135 4.2e-09 1
UNIPROTKB|F1SVC7 - symbol:CHMP3 "Uncharacterized protein"... 131 1.1e-08 1
UNIPROTKB|I3LFQ9 - symbol:CHMP3 "Uncharacterized protein"... 131 1.2e-08 1
RGD|708556 - symbol:Chmp3 "charged multivesicular body pr... 131 1.3e-08 1
UNIPROTKB|E1C230 - symbol:VPS24 "Uncharacterized protein"... 130 1.5e-08 1
UNIPROTKB|F5H875 - symbol:CHMP1A "Charged multivesicular ... 129 1.6e-08 1
UNIPROTKB|E2RDX0 - symbol:CHMP3 "Uncharacterized protein"... 132 2.6e-08 1
WB|WBGene00020866 - symbol:T27F7.1 species:6239 "Caenorha... 127 2.7e-08 1
WB|WBGene00017735 - symbol:F23C8.6 species:6239 "Caenorha... 126 3.3e-08 1
MGI|MGI:1913950 - symbol:Chmp3 "charged multivesicular bo... 127 3.9e-08 1
TAIR|locus:2032607 - symbol:VPS46.2 species:3702 "Arabido... 123 7.4e-08 1
TAIR|locus:2007883 - symbol:VPS46.1 "vacuolar protein sor... 122 9.7e-08 1
CGD|CAL0000893 - symbol:orf19.4307 species:5476 "Candida ... 124 2.0e-07 1
UNIPROTKB|Q5AG72 - symbol:DID2 "Putative uncharacterized ... 124 2.0e-07 1
TAIR|locus:2075924 - symbol:VPS24.2 species:3702 "Arabido... 117 3.6e-07 1
UNIPROTKB|H9L0W3 - symbol:CHMP2A "Charged multivesicular ... 114 6.1e-07 1
FB|FBgn0037231 - symbol:vps24 "Charged multivesicular bod... 116 7.3e-07 1
DICTYBASE|DDB_G0284769 - symbol:vps24 "SNF7 family protei... 111 2.1e-06 1
SGD|S000006435 - symbol:DID2 "Class E protein of the vacu... 108 1.8e-05 1
>TAIR|locus:2024107 [details] [associations]
symbol:VPS2.3 "vacuolar protein sorting-associated
protein 2.3" species:3702 "Arabidopsis thaliana" [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003027 GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12192 OMA:DPQKTLK
EMBL:AY052238 EMBL:AY060501 IPI:IPI00517467 PIR:D86170
RefSeq:NP_563696.1 UniGene:At.26425 ProteinModelPortal:Q941D5
SMR:Q941D5 IntAct:Q941D5 PRIDE:Q941D5 EnsemblPlants:AT1G03950.1
GeneID:839362 KEGG:ath:AT1G03950 TAIR:At1g03950 InParanoid:Q941D5
PhylomeDB:Q941D5 ProtClustDB:CLSN2687652 Genevestigator:Q941D5
Uniprot:Q941D5
Length = 210
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 130/183 (71%), Positives = 140/183 (76%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EKEIG+LQ EEKKLV EIKRTAK+GNEGATKILARQLIRLRQQIANLQGSRAQ+RGIAT
Sbjct: 28 IEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIAT 87
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
HTQAMHAH+SV M+PAKQAKVMREFQKQSAQMDMTTEMMSD+I
Sbjct: 88 HTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSID 147
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
QVLDEIG+D+ASQLS+APKGKI K ED SSGIDELEKRLA
Sbjct: 148 DALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAPKGKIGGKKAEDVGSSGIDELEKRLA 207
Query: 181 ALR 183
ALR
Sbjct: 208 ALR 210
>TAIR|locus:2163396 [details] [associations]
symbol:VPS2.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AB017065 EMBL:AB024024 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 EMBL:AK227410 EMBL:BT005848
IPI:IPI00548186 IPI:IPI00892046 RefSeq:NP_001119371.1
RefSeq:NP_199269.1 UniGene:At.30067 ProteinModelPortal:Q0WTY4
IntAct:Q0WTY4 STRING:Q0WTY4 PaxDb:Q0WTY4 PRIDE:Q0WTY4
EnsemblPlants:AT5G44560.1 GeneID:834483 KEGG:ath:AT5G44560
TAIR:At5g44560 InParanoid:Q0WTY4 OMA:APKGRIG PhylomeDB:Q0WTY4
ProtClustDB:CLSN2916725 Genevestigator:Q0WTY4 Uniprot:Q0WTY4
Length = 222
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 110/193 (56%), Positives = 134/193 (69%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E+EI +LQ EEK+LVAEIK+TAKTGNE ATKILARQL+RLRQQI NLQGSRAQIRG+ T
Sbjct: 28 IEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTT 87
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
HTQA++A +S+ QM P KQAKV+++FQKQSAQ+DMT EMMS+ I
Sbjct: 88 HTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAID 147
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNT----------EDASSS 170
QVLDEIGV VASQLS+APKG+IA+K +++ SS
Sbjct: 148 ETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSESS 207
Query: 171 GIDELEKRLAALR 183
+DELEKRLA+LR
Sbjct: 208 EVDELEKRLASLR 220
>UNIPROTKB|F1NR65 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005739 GO:GO:0005634 GO:GO:0015031
GeneTree:ENSGT00550000074737 OMA:DPQKTLK IPI:IPI00591923
EMBL:AADN02042324 Ensembl:ENSGALT00000024990 Uniprot:F1NR65
Length = 214
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 57/182 (31%), Positives = 104/182 (57%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++EK+L EIK+ AKTGN+ A K+LA+QL++LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGK--IASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T AS+ +E+E++L
Sbjct: 150 FDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAARGLPSASTSKASTISDEEIERQLK 209
Query: 181 AL 182
AL
Sbjct: 210 AL 211
>ZFIN|ZDB-GENE-040426-2539 [details] [associations]
symbol:chmp2bb "chromatin modifying protein 2Bb"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2539
GO:GO:0015031 GeneTree:ENSGT00550000074737 EMBL:CR762462
IPI:IPI00493945 Ensembl:ENSDART00000125682 ArrayExpress:F1QLN0
Bgee:F1QLN0 Uniprot:F1QLN0
Length = 263
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 58/178 (32%), Positives = 101/178 (56%)
Query: 7 ALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMH 66
AL+++EK+L EIK+ AKTGN A K+LA+QL+++R+Q +++ ++T T+ M+
Sbjct: 83 ALEKQEKQLEMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMN 142
Query: 67 AHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXX 126
+ + +M+P K + ++ FQK++A+MDMT EMM+DT+
Sbjct: 143 SQMKMAGAMATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDS 202
Query: 127 XXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI-DE-LEKRLAAL 182
QVLDEIG++++ +++ AP + + A + GI DE +E++L AL
Sbjct: 203 GDEEESQDIVNQVLDEIGIEISGKMAHAPSAARKTPSAATAKADGISDEDIERQLKAL 260
>UNIPROTKB|Q5F3A2 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628 KO:K12192
OrthoDB:EOG469QW1 EMBL:AJ851748 IPI:IPI00591923
RefSeq:NP_001025963.1 UniGene:Gga.9706 ProteinModelPortal:Q5F3A2
STRING:Q5F3A2 GeneID:418461 KEGG:gga:418461 InParanoid:Q5F3A2
NextBio:20821640 Uniprot:Q5F3A2
Length = 214
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 56/182 (30%), Positives = 104/182 (57%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++E++L EIK+ AKTGN+ A K+LA+QL++LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQERQLELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGK--IASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T AS+ +E+E++L
Sbjct: 150 FDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAARGLPSASTSKASTISDEEIERQLK 209
Query: 181 AL 182
AL
Sbjct: 210 AL 211
>TAIR|locus:2054612 [details] [associations]
symbol:VPS2.1 species:3702 "Arabidopsis thaliana"
[GO:0015031 "protein transport" evidence=IEA;IMP] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005771 "multivesicular body" evidence=IDA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0005771 GO:GO:0000815
eggNOG:COG5491 KO:K12191 OMA:MEWLFGK EMBL:AC006420 EMBL:AY090953
EMBL:AY088685 EMBL:AJ628449 EMBL:AJ628450 EMBL:AJ628451
EMBL:AJ628452 EMBL:AJ628453 EMBL:AJ628454 EMBL:AJ628455
EMBL:AJ628456 EMBL:AJ628457 EMBL:AJ628458 EMBL:AJ628459
EMBL:AJ628460 EMBL:AJ628461 EMBL:AJ628462 EMBL:AJ628463
EMBL:AJ628464 EMBL:AJ628465 EMBL:AJ628466 EMBL:AJ628467
EMBL:AJ628468 EMBL:AJ628469 EMBL:AJ628470 EMBL:AJ628471
EMBL:AJ628472 EMBL:AJ628473 EMBL:AJ628474 EMBL:AJ628475
EMBL:AJ628476 EMBL:AJ628477 EMBL:AJ628478 EMBL:AJ628479
EMBL:AJ628480 EMBL:AJ628481 EMBL:AJ628482 EMBL:AJ628483
EMBL:AJ628484 EMBL:AJ628485 EMBL:AJ628486 EMBL:AJ628487
EMBL:AJ628488 EMBL:AJ628489 EMBL:AJ628490 EMBL:AJ628491
EMBL:AJ628492 EMBL:AJ628493 EMBL:AJ628494 EMBL:AJ628495
EMBL:AJ628496 EMBL:AJ628497 EMBL:AJ628498 EMBL:AJ628499
EMBL:AJ628500 EMBL:AJ628501 EMBL:AJ628502 EMBL:AJ628503
EMBL:AJ628504 EMBL:AJ628505 EMBL:AJ628506 EMBL:AJ628507
EMBL:AJ628508 EMBL:AJ628509 EMBL:AJ628510 EMBL:AJ628511
EMBL:AJ628512 EMBL:AJ628513 EMBL:AJ628514 EMBL:AJ628515
EMBL:AJ628516 EMBL:AJ628517 EMBL:AJ628518 EMBL:AJ628519
EMBL:AJ628520 EMBL:AJ628521 EMBL:AJ628522 EMBL:AJ628523
EMBL:AJ628524 EMBL:AJ628525 EMBL:AJ628526 EMBL:AJ628527
EMBL:AJ628528 EMBL:AJ628529 EMBL:AJ628530 EMBL:AJ628531
EMBL:AJ628532 EMBL:AJ628533 EMBL:AJ628534 EMBL:AJ628535
EMBL:AJ628536 EMBL:AJ628537 EMBL:AJ628538 EMBL:AJ628539
EMBL:AJ628540 EMBL:AJ628541 EMBL:AJ628542 EMBL:AJ628543
EMBL:AJ628544 EMBL:AJ628545 EMBL:AJ628546 IPI:IPI00528753
PIR:D84478 RefSeq:NP_565336.1 UniGene:At.20774
ProteinModelPortal:Q9SKI2 SMR:Q9SKI2 IntAct:Q9SKI2 STRING:Q9SKI2
PaxDb:Q9SKI2 PRIDE:Q9SKI2 EnsemblPlants:AT2G06530.1 GeneID:815211
KEGG:ath:AT2G06530 TAIR:At2g06530 InParanoid:Q9SKI2
PhylomeDB:Q9SKI2 ProtClustDB:CLSN2688018 Genevestigator:Q9SKI2
Uniprot:Q9SKI2
Length = 225
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 66/194 (34%), Positives = 100/194 (51%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E+E LQ +EKKL+ EIK+TAK G GA K++A+ LIR R QI ++Q++G++
Sbjct: 30 IERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSL 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + + ++ QM K+M+EF++Q+ +M+M +E+M D I
Sbjct: 90 RIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAID 149
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIA---SKN-------TEDASSS 170
QVLDEIG+D+ +L AP G +A +KN T S
Sbjct: 150 DALEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVAVPAAKNKVVQAEATGAEDSG 209
Query: 171 GID-ELEKRLAALR 183
GID +L+ RL LR
Sbjct: 210 GIDSDLQARLDNLR 223
>UNIPROTKB|Q9UQN3 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0008219 "cell death" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0005829 "cytosol" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0016197 "endosomal transport" evidence=TAS] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0031902
GO:GO:0015031 GO:GO:0008219 GO:GO:0016197 Orphanet:803
GO:GO:0016044 HOGENOM:HOG000177218 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK EMBL:AF151842
EMBL:AL080122 EMBL:AK296072 EMBL:CR533456 EMBL:AK222654
EMBL:AC123511 EMBL:AC130885 EMBL:BC001553 IPI:IPI00550181
PIR:T12468 RefSeq:NP_001231573.1 RefSeq:NP_054762.2
UniGene:Hs.476930 PDB:2JQK PDBsum:2JQK ProteinModelPortal:Q9UQN3
SMR:Q9UQN3 IntAct:Q9UQN3 MINT:MINT-1430090 STRING:Q9UQN3
PhosphoSite:Q9UQN3 DMDM:73917746 PaxDb:Q9UQN3 PRIDE:Q9UQN3
DNASU:25978 Ensembl:ENST00000263780 Ensembl:ENST00000471660
GeneID:25978 KEGG:hsa:25978 UCSC:uc003dqp.4 GeneCards:GC03P087360
HGNC:HGNC:24537 HPA:HPA035069 MIM:600795 MIM:609512 MIM:614696
neXtProt:NX_Q9UQN3 Orphanet:275864 PharmGKB:PA142672112
InParanoid:Q9UQN3 PhylomeDB:Q9UQN3 ChiTaRS:CHMP2B
EvolutionaryTrace:Q9UQN3 GenomeRNAi:25978 NextBio:47630
ArrayExpress:Q9UQN3 Bgee:Q9UQN3 CleanEx:HS_CHMP2B
Genevestigator:Q9UQN3 GermOnline:ENSG00000083937 Uniprot:Q9UQN3
Length = 213
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 56/182 (30%), Positives = 102/182 (56%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++EK+L EIK+ AK GN+ A K+LA+QL+ LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T A+ S +E+E++L
Sbjct: 150 FDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLK 208
Query: 181 AL 182
AL
Sbjct: 209 AL 210
>UNIPROTKB|E2R417 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
KO:K12192 OMA:DPQKTLK EMBL:AAEX03016386 EMBL:AAEX03016387
RefSeq:XP_544799.3 ProteinModelPortal:E2R417 SMR:E2R417
Ensembl:ENSCAFT00000012434 GeneID:487675 KEGG:cfa:487675
NextBio:20861232 Uniprot:E2R417
Length = 213
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 55/182 (30%), Positives = 102/182 (56%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++EK+L EIK+ AK GN+ A ++LA+QL+ LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T A+ S +E+E++L
Sbjct: 150 FDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLK 208
Query: 181 AL 182
AL
Sbjct: 209 AL 210
>UNIPROTKB|F2Z5Q1 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739 GO:GO:0005634
GO:GO:0015031 GeneTree:ENSGT00550000074737 OMA:DPQKTLK
EMBL:CU633644 ProteinModelPortal:F2Z5Q1 SMR:F2Z5Q1
Ensembl:ENSSSCT00000013128 Uniprot:F2Z5Q1
Length = 213
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 55/182 (30%), Positives = 102/182 (56%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++EK+L EIK+ AK GN+ A ++LA+QL+ LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T A+ S +E+E++L
Sbjct: 150 FDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLK 208
Query: 181 AL 182
AL
Sbjct: 209 AL 210
>MGI|MGI:1916192 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=ISO] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1916192 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
ChiTaRS:CHMP2B EMBL:AK004506 EMBL:AK084111 EMBL:BC042626
EMBL:BC055809 IPI:IPI00222386 RefSeq:NP_081155.1 UniGene:Mm.432944
ProteinModelPortal:Q8BJF9 SMR:Q8BJF9 STRING:Q8BJF9
PhosphoSite:Q8BJF9 PaxDb:Q8BJF9 PRIDE:Q8BJF9
Ensembl:ENSMUST00000004965 GeneID:68942 KEGG:mmu:68942
UCSC:uc007zqj.1 InParanoid:Q8BJF9 NextBio:328237 Bgee:Q8BJF9
CleanEx:MM_CHMP2B Genevestigator:Q8BJF9
GermOnline:ENSMUSG00000004843 Uniprot:Q8BJF9
Length = 213
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 55/182 (30%), Positives = 102/182 (56%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++EK+L EIK+ AK GN+ A ++LA+QL+ LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T A+ S +E+E++L
Sbjct: 150 FDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLK 208
Query: 181 AL 182
AL
Sbjct: 209 AL 210
>UNIPROTKB|Q3SX42 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 EMBL:BC104514 IPI:IPI00696266
RefSeq:NP_001030549.1 UniGene:Bt.19768 ProteinModelPortal:Q3SX42
STRING:Q3SX42 Ensembl:ENSBTAT00000010436 GeneID:615954
KEGG:bta:615954 CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628
InParanoid:Q3SX42 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
NextBio:20899880 Uniprot:Q3SX42
Length = 213
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 54/182 (29%), Positives = 102/182 (56%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++EK+L EIK+ AK GN+ A ++LA+QL+ LR+Q +++ ++T T
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M+ FQK++ +M+MT EM++DT+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDELEKRLA 180
QVLDEIG++++ +++ AP + S +T ++ S +E+E++L
Sbjct: 150 FDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKSTISD-EEIERQLK 208
Query: 181 AL 182
AL
Sbjct: 209 AL 210
>ZFIN|ZDB-GENE-070628-3 [details] [associations]
symbol:chmp2ba "chromatin modifying protein 2Ba"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-070628-3 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 GeneTree:ENSGT00550000074737
HOVERGEN:HBG102628 KO:K12192 OrthoDB:EOG469QW1 EMBL:CR361551
IPI:IPI00509438 RefSeq:NP_001116769.1 UniGene:Dr.144266
Ensembl:ENSDART00000055866 GeneID:569532 KEGG:dre:569532
OMA:SADEEEC NextBio:20889725 Uniprot:B0UXH0
Length = 216
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 55/184 (29%), Positives = 100/184 (54%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHT 62
++ AL+++E+++ EIK+ AKTGN A KILA+QL++LR+Q +++ ++T T
Sbjct: 30 RDRAALERQERQMEMEIKKMAKTGNREACKILAKQLVQLRKQKNRTYAVSSKVTSMSTQT 89
Query: 63 QAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXX 122
+ M++ + +M+P K + M++FQK++ +M MT +M++ T+
Sbjct: 90 KVMNSQMKMAGAMSTTAKTMQTVNKRMDPKKTLQTMQDFQKENMKMGMTEDMLNSTLDEI 149
Query: 123 XXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK-GKI---ASKNTEDASSSGIDELEKR 178
QVLDEIG++++ ++ AP GKI AS ++ E+E++
Sbjct: 150 FDESADEEECQDIVNQVLDEIGIEISGKMVRAPSTGKILPGASPAKSKTATISDAEIERQ 209
Query: 179 LAAL 182
L AL
Sbjct: 210 LKAL 213
>UNIPROTKB|C9J0A7 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOGENOM:HOG000177218 EMBL:AC123511 EMBL:AC130885 HGNC:HGNC:24537
ChiTaRS:CHMP2B IPI:IPI00947040 ProteinModelPortal:C9J0A7
STRING:C9J0A7 PRIDE:C9J0A7 Ensembl:ENST00000494980
ArrayExpress:C9J0A7 Bgee:C9J0A7 Uniprot:C9J0A7
Length = 183
Score = 148 (57.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 88 QMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV 147
+M+P K + M+ FQK++ +M+MT EM++DT+ QVLDEIG+++
Sbjct: 85 KMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI 144
Query: 148 ASQLSAAPKG--KIASKNTEDASSSGIDELEKRLAAL 182
+ +++ AP + S +T A+ S +E+E++L AL
Sbjct: 145 SGKMAKAPSAARSLPSASTSKATISD-EEIERQLKAL 180
Score = 108 (43.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 3 KEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQ 44
++ AL+++EK+L EIK+ AK GN+ A K+LA+QL+ LR+Q
Sbjct: 30 RDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQ 71
>DICTYBASE|DDB_G0292400 [details] [associations]
symbol:vps2B "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0292400 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0010008 EMBL:AAFI02000190 eggNOG:COG5491 KO:K12191
OMA:MEWLFGK RefSeq:XP_629585.1 ProteinModelPortal:Q54DB1
STRING:Q54DB1 EnsemblProtists:DDB0234176 GeneID:8628645
KEGG:ddi:DDB_G0292400 ProtClustDB:CLSZ2429397 Uniprot:Q54DB1
Length = 198
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 55/166 (33%), Positives = 87/166 (52%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E ALQ +EKK++ +IK+ AK G + KI+A+ L+R R I + Q++ ++
Sbjct: 28 IDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSL 87
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + + ++ QM + K+M EF++QS +MDM EMM+DT+
Sbjct: 88 RIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMD 147
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--G-KIASKN 163
QVLDEIG+D+ASQL AP G +ASK+
Sbjct: 148 QVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDAPTTVGTSVASKH 193
>ZFIN|ZDB-GENE-040426-2922 [details] [associations]
symbol:bc2 "putative breast adenocarcinoma marker"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-2922 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191
OrthoDB:EOG4HMJBJ EMBL:BC045320 IPI:IPI00492134 RefSeq:NP_998682.1
UniGene:Dr.75361 ProteinModelPortal:Q7ZW25 STRING:Q7ZW25
PRIDE:Q7ZW25 GeneID:798901 KEGG:dre:798901 InParanoid:Q7ZW25
NextBio:20933600 ArrayExpress:Q7ZW25 Uniprot:Q7ZW25
Length = 220
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 59/190 (31%), Positives = 98/190 (51%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+Q+EKK++A+IK+ AK G A KI+A+ L+R R+ + RA I+ ++
Sbjct: 29 LDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF++QS MDM EMM+D I
Sbjct: 89 KIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKI---ASKNTEDASS-SGID- 173
QVLDE+G+ ++ +LS P G + A K E + + D
Sbjct: 149 DAMGDEDDEEESDAVVSQVLDELGLTLSDELSNLPATGGSLSVAAGKKAEPQPTLADADA 208
Query: 174 ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DLEERLNNLR 218
>UNIPROTKB|E2RIU2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 CTD:27243 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AAEX03000690 RefSeq:XP_850536.1
ProteinModelPortal:E2RIU2 Ensembl:ENSCAFT00000003684 GeneID:476364
KEGG:cfa:476364 NextBio:20852037 Uniprot:E2RIU2
Length = 222
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 57/192 (29%), Positives = 99/192 (51%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKK++A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++
Sbjct: 29 LDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF++Q+ MDM EMM+D I
Sbjct: 89 KIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID- 173
QVLDE+G+ + +LS P G ++ K E A+S+ +D
Sbjct: 149 DAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAASGKKAEAAASALVDA 208
Query: 174 --ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DADLEERLKNLR 220
>UNIPROTKB|Q3T0U5 [details] [associations]
symbol:CHMP2A "Chromatin modifying protein 2A" species:9913
"Bos taurus" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK GeneTree:ENSGT00550000074737 EMBL:DAAA02047921
EMBL:BC102258 IPI:IPI00705335 RefSeq:NP_001029722.1 UniGene:Bt.5624
STRING:Q3T0U5 Ensembl:ENSBTAT00000018429 GeneID:523847
KEGG:bta:523847 InParanoid:Q3T0U5 NextBio:20873841 Uniprot:Q3T0U5
Length = 222
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 56/192 (29%), Positives = 98/192 (51%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKK++A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++
Sbjct: 29 LDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF++Q+ MDM EMM+D I
Sbjct: 89 KIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID- 173
QVLDE+G+ + +LS P G ++ K E +S+ +D
Sbjct: 149 DAMGDEDDEEESDAVVAQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALVDA 208
Query: 174 --ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DADLEERLKNLR 220
>UNIPROTKB|O43633 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0016197 GO:GO:0016044
EMBL:CH471135 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ EMBL:AF042384
EMBL:AJ277113 EMBL:AY364248 EMBL:BT007298 EMBL:CR457002
EMBL:AK311974 EMBL:BC002502 IPI:IPI00004416 RefSeq:NP_055268.1
RefSeq:NP_940818.1 UniGene:Hs.12107 ProteinModelPortal:O43633
SMR:O43633 DIP:DIP-48533N IntAct:O43633 MINT:MINT-5005843
STRING:O43633 PhosphoSite:O43633 OGP:O43633 PaxDb:O43633
PeptideAtlas:O43633 PRIDE:O43633 DNASU:27243
Ensembl:ENST00000312547 GeneID:27243 KEGG:hsa:27243 UCSC:uc002qti.3
GeneCards:GC19M059062 HGNC:HGNC:30216 HPA:HPA041153 HPA:HPA042031
MIM:610893 neXtProt:NX_O43633 PharmGKB:PA142672111
InParanoid:O43633 OMA:MEWLFGK PhylomeDB:O43633 ChiTaRS:CHMP2A
GenomeRNAi:27243 NextBio:50143 Bgee:O43633 CleanEx:HS_CHMP2A
Genevestigator:O43633 GermOnline:ENSG00000130724 Uniprot:O43633
Length = 222
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 57/192 (29%), Positives = 98/192 (51%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKK++A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++
Sbjct: 29 LDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF++Q+ MDM EMM+D I
Sbjct: 89 KIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID- 173
QVLDE+G+ + +LS P G ++ K E A+S+ D
Sbjct: 149 DAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAAASALADA 208
Query: 174 --ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DADLEERLKNLR 220
>MGI|MGI:1916203 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1916203 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK EMBL:AK005267 EMBL:BC012230 IPI:IPI00119020
RefSeq:NP_081161.1 UniGene:Mm.295670 ProteinModelPortal:Q9DB34
SMR:Q9DB34 STRING:Q9DB34 PaxDb:Q9DB34 PRIDE:Q9DB34
Ensembl:ENSMUST00000005711 GeneID:68953 KEGG:mmu:68953
UCSC:uc009ffc.2 GeneTree:ENSGT00550000074737 InParanoid:Q9DB34
NextBio:328271 Bgee:Q9DB34 CleanEx:MM_CHMP2A Genevestigator:Q9DB34
GermOnline:ENSMUSG00000033916 Uniprot:Q9DB34
Length = 222
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 56/192 (29%), Positives = 97/192 (50%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKK++A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++
Sbjct: 29 LDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF++Q+ MDM EMM+D I
Sbjct: 89 KIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID- 173
QVLDE+G+ + +LS P G ++ K E +S+ D
Sbjct: 149 DAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADA 208
Query: 174 --ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DADLEERLKNLR 220
>RGD|1305050 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1305050 GO:GO:0005829
GO:GO:0015031 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
GeneTree:ENSGT00550000074737 EMBL:BC167093 EMBL:CH474090
IPI:IPI00360875 RefSeq:NP_001102376.1 UniGene:Rn.203178 SMR:B2RZB5
STRING:B2RZB5 Ensembl:ENSRNOT00000030931 GeneID:365191
KEGG:rno:365191 UCSC:RGD:1305050 NextBio:686824
Genevestigator:B2RZB5 Uniprot:B2RZB5
Length = 222
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 56/192 (29%), Positives = 97/192 (50%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKK++A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++
Sbjct: 29 LDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF++Q+ MDM EMM+D I
Sbjct: 89 KIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID- 173
QVLDE+G+ + +LS P G ++ K E +S+ D
Sbjct: 149 DAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADA 208
Query: 174 --ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DADLEERLKNLR 220
>UNIPROTKB|Q5ZHN1 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 EMBL:AJ721103 IPI:IPI00594797 RefSeq:NP_001074361.1
UniGene:Gga.7026 ProteinModelPortal:Q5ZHN1 STRING:Q5ZHN1
PRIDE:Q5ZHN1 GeneID:776036 KEGG:gga:776036 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 InParanoid:Q5ZHN1 KO:K12191
OrthoDB:EOG4HMJBJ NextBio:20922661 Uniprot:Q5ZHN1
Length = 220
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 53/190 (27%), Positives = 98/190 (51%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKK++ +IK+ AK G A KI+A+ L+R R+ + RA ++ ++
Sbjct: 29 LDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + +++S+ Q++ + K+M EF+KQ+ MDM E+M+D I
Sbjct: 89 KIQTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIASKN--TEDASSSGID--- 173
QVLDE+G+++ +L+ P G +A+ +A+++ D
Sbjct: 149 DAMGDEDDEEESDAVVSQVLDELGLNLTDELATLPPPGGSLAAGEGRAAEAAAALADADA 208
Query: 174 ELEKRLAALR 183
+LE+RL LR
Sbjct: 209 DLEERLKNLR 218
>WB|WBGene00007216 [details] [associations]
symbol:C01A2.4 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 KO:K12192 EMBL:Z81029 PIR:T18795
RefSeq:NP_493357.2 ProteinModelPortal:O02208 SMR:O02208
IntAct:O02208 STRING:O02208 PaxDb:O02208 EnsemblMetazoa:C01A2.4.1
EnsemblMetazoa:C01A2.4.2 GeneID:182050 KEGG:cel:CELE_C01A2.4
UCSC:C01A2.4 CTD:182050 WormBase:C01A2.4 InParanoid:O02208
OMA:EVERNRT NextBio:916198 Uniprot:O02208
Length = 207
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 57/184 (30%), Positives = 89/184 (48%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E + + + EK+L EIK+ A G+ A + LA+QL++LR Q G A+I G+
Sbjct: 27 LESDRRQMDRREKELEQEIKKLAAKGHNDAARHLAKQLVQLRNQKTKSIGMSARISGVQA 86
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
M + + + QM K A MREFQ +M +T EMM+DT+
Sbjct: 87 QNSHMQSMAKMGSAMGTTVKTMKAMNAQMPLEKVAANMREFQMAQEKMGLTEEMMNDTLD 146
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
QVLDEIG+++ S+L+ P + +K + A + D+LE +LA
Sbjct: 147 SILDAPGDADEQDAIVNQVLDEIGIEMNSKLANVPA--LPTKVSSTAPAD-FDDLEAQLA 203
Query: 181 ALRN 184
LR+
Sbjct: 204 RLRS 207
>FB|FBgn0035589 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
EMBL:AE014296 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
eggNOG:NOG268821 KO:K12192 OMA:DPQKTLK EMBL:AY061433
RefSeq:NP_647947.1 UniGene:Dm.850 SMR:Q9VRJ5 STRING:Q9VRJ5
EnsemblMetazoa:FBtr0077166 GeneID:38599 KEGG:dme:Dmel_CG4618
UCSC:CG4618-RA FlyBase:FBgn0035589 InParanoid:Q9VRJ5
OrthoDB:EOG4MPG6C GenomeRNAi:38599 NextBio:809457 Uniprot:Q9VRJ5
Length = 212
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 50/184 (27%), Positives = 93/184 (50%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E+E +++EE+KL EI+R A GN A +ILA+QL+ +R+Q + + +I+ I
Sbjct: 30 IERERRKMEEEERKLELEIRRNAAAGNNDACRILAKQLVEIRKQKSRTYAAAGKIQSIGY 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
+ M A+ ++ M P + +R+FQ + +M+MT EM++DT+
Sbjct: 90 QNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAIGETVRQFQAANMKMEMTDEMINDTLD 149
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
+VLDEIG++++ ++S+ P S + E + ++ +LA
Sbjct: 150 DMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPA--TGSSDFETSGKRTEKDIADQLA 207
Query: 181 ALRN 184
LR+
Sbjct: 208 KLRS 211
>ASPGD|ASPL0000001940 [details] [associations]
symbol:AN6898 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0015031 EMBL:BN001301 GO:GO:0000815 OMA:MEWLFGK GO:GO:0070676
EnsemblFungi:CADANIAT00007700 Uniprot:C8V2X5
Length = 226
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L+ +EKKL+ +IK++AK G GA KI A+ L+R R+ I R Q++ I+
Sbjct: 32 LDRERTKLENQEKKLIQDIKKSAKNGQIGACKIQAKDLVRTRRYIQKFYQMRTQLQAISL 91
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
Q + ++ + QM PA Q ++ EF++++ MD EMM D I
Sbjct: 92 RIQTVRSNEQMMQSMKGATMLLGSMNRQMNLPALQ-RIAMEFERENDIMDQRQEMMDDAI 150
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG----KIASKNTEDASSSG---- 171
+VLDEIGVD++ L P G ++ A +G
Sbjct: 151 DEATGIEGEEEEGEDIVKEVLDEIGVDLSQALGETPSGIQKESVSEGRVAQAIGAGGAGG 210
Query: 172 ---IDELEKRLAALR 183
D+L+ RL +LR
Sbjct: 211 ASDDDDLQARLDSLR 225
>FB|FBgn0039402 [details] [associations]
symbol:vps2 "vps2" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014297 GO:GO:0015031 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 FlyBase:FBgn0039402 EMBL:BT003747
RefSeq:NP_651455.1 UniGene:Dm.10330 SMR:Q9VBI3 IntAct:Q9VBI3
MINT:MINT-1674416 STRING:Q9VBI3 EnsemblMetazoa:FBtr0084967
GeneID:43164 KEGG:dme:Dmel_CG14542 UCSC:CG14542-RA CTD:43164
InParanoid:Q9VBI3 GenomeRNAi:43164 NextBio:832507 Uniprot:Q9VBI3
Length = 256
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 47/176 (26%), Positives = 86/176 (48%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E ++Q+EKK++A+IK+ AK G A KI+A+ L+R R+ +A I+ ++
Sbjct: 29 LDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKDLVRTRRYAKKFMLMKANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + + +++ Q+ + K++++F+KQS MDM EM++D I
Sbjct: 89 KIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSEMMDMKEEMINDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELE 176
QVLDE+G+ + QL P AS + A +G + +
Sbjct: 149 DAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPS---ASGSLSIAGGAGAQKAQ 201
>CGD|CAL0003689 [details] [associations]
symbol:VPS2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0006623 "protein targeting to
vacuole" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689 GO:GO:0006623
EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+ +EI LQQ+EKKL+++IK++AK+G + KI A+ LIR + ++ + Q++ I+
Sbjct: 33 LSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAKDLIRTKSYVSKFTSMKTQLQAISL 92
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q++ ++ + M + +++ +EF K+S MD E M D I
Sbjct: 93 RIQSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSRIAQEFAKESDMMDQKQEFMDDAID 152
Query: 121 XXXXXXXXXXXXXXXXXQ----VLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDE 174
+ VLDEIGVD+ + L P G I + N E A + + E
Sbjct: 153 DAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLKDTPTG-INAGNIEQADRARVAE 209
>UNIPROTKB|Q5A501 [details] [associations]
symbol:VPS2 "Putative uncharacterized protein DID4"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689
GO:GO:0006623 EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+ +EI LQQ+EKKL+++IK++AK+G + KI A+ LIR + ++ + Q++ I+
Sbjct: 33 LSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAKDLIRTKSYVSKFTSMKTQLQAISL 92
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q++ ++ + M + +++ +EF K+S MD E M D I
Sbjct: 93 RIQSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSRIAQEFAKESDMMDQKQEFMDDAID 152
Query: 121 XXXXXXXXXXXXXXXXXQ----VLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDE 174
+ VLDEIGVD+ + L P G I + N E A + + E
Sbjct: 153 DAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLKDTPTG-INAGNIEQADRARVAE 209
>POMBASE|SPAC4F8.01 [details] [associations]
symbol:did4 "ESCRT III complex subunit Did4" species:4896
"Schizosaccharomyces pombe" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC4F8.01 EMBL:CU329670
GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491 HOGENOM:HOG000177218
KO:K12191 OMA:MEWLFGK GO:GO:0006900 PIR:T38831 RefSeq:NP_593871.3
ProteinModelPortal:O14177 STRING:O14177 EnsemblFungi:SPAC4F8.01.1
GeneID:2543521 KEGG:spo:SPAC4F8.01 OrthoDB:EOG4WT0M1
NextBio:20804531 GO:GO:0045053 Uniprot:O14177
Length = 210
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 50/180 (27%), Positives = 84/180 (46%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E L Q E+ L+ EIK +AK GN GA +I AR L+RLR + ++ Q++ I+
Sbjct: 32 LDRERTKLDQRERALIQEIKGSAKAGNTGAARIQARDLMRLRNSRKKMMNAKTQLQAISL 91
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q M + M A++ ++F++++ M+ EM+ + +
Sbjct: 92 RLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPAMARITQQFERENEIMEQRQEMIDENMD 151
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQL--SAAPKGKIASKNTEDASSSGIDELEKR 178
+VLDEIGVD++ L +A G + TED + +DEL KR
Sbjct: 152 DALEEDDEEEADELVN-KVLDEIGVDLSQGLPDAATQIGTVPELKTEDNLQARLDELAKR 210
>SGD|S000001485 [details] [associations]
symbol:DID4 "Class E Vps protein of the ESCRT-III complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0000815 "ESCRT III complex" evidence=IDA] [GO:0045324 "late
endosome to vacuole transport" evidence=IPI] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000001485 GO:GO:0015031
EMBL:BK006944 GO:GO:0045324 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 GO:GO:0043162 OrthoDB:EOG4WT0M1
GO:GO:0045053 EMBL:Z28002 PIR:S37812 RefSeq:NP_012924.2 PDB:2V6X
PDBsum:2V6X ProteinModelPortal:P36108 SMR:P36108 DIP:DIP-1916N
IntAct:P36108 MINT:MINT-404147 STRING:P36108 PaxDb:P36108
EnsemblFungi:YKL002W GeneID:853868 KEGG:sce:YKL002W CYGD:YKL002w
EvolutionaryTrace:P36108 NextBio:975133 Genevestigator:P36108
GermOnline:YKL002W GO:GO:0070676 Uniprot:P36108
Length = 232
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 50/175 (28%), Positives = 83/175 (47%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E+E L+ ++KKLV+EIK++AK G A K+ A+ L+R R I +AQ++ I+
Sbjct: 32 LEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISL 91
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
QA+ + + M + ++ EF+KQS M E M + I
Sbjct: 92 RIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAID 151
Query: 121 XXXXXXXXXXXXXXXXX-QVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDE 174
+VLDEIGVD+ SQL + P+ +++ + ++ GI E
Sbjct: 152 NVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQSTPQNLVSNAPIAE-TAMGIPE 205
>WB|WBGene00012903 [details] [associations]
symbol:vps-2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0009792 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AL110485 RefSeq:NP_496717.1
ProteinModelPortal:Q9U2F6 SMR:Q9U2F6 IntAct:Q9U2F6 STRING:Q9U2F6
PaxDb:Q9U2F6 EnsemblMetazoa:Y46G5A.12.1 EnsemblMetazoa:Y46G5A.12.2
EnsemblMetazoa:Y46G5A.12.3 GeneID:174908 KEGG:cel:CELE_Y46G5A.12
UCSC:Y46G5A.12.1 CTD:174908 WormBase:Y46G5A.12 InParanoid:Q9U2F6
NextBio:885996 Uniprot:Q9U2F6
Length = 237
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 40/155 (25%), Positives = 74/155 (47%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++E ++ +EKK++A+IK AK + K++A+ L+R R+ I +A I+ ++
Sbjct: 29 LDRERARMEAQEKKVIADIKNMAKKNQMDSVKVMAKDLVRTRRYIKKFIVMKANIQAVSL 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q + + ++ Q+ + K+M EF+KQS MDM E+M D I
Sbjct: 89 KVQTLKSQDAMASAMKGVTKAMQSMNRQLNLPQIQKIMMEFEKQSEIMDMKEEVMGDAID 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 155
QVLDE+G+ + +++ P
Sbjct: 149 DALGDAGDEEETDQIVNQVLDELGIQMGEEMAGLP 183
>UNIPROTKB|I3LSS2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0015031 GeneTree:ENSGT00550000074737
Ensembl:ENSSSCT00000030728 OMA:FITMRAN Uniprot:I3LSS2
Length = 167
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 46/165 (27%), Positives = 80/165 (48%)
Query: 28 EGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXX 87
+ A +I+A+ L+R R+ + RA I+ ++ Q + +++S+
Sbjct: 1 QDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNR 60
Query: 88 QMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV 147
Q++ + K+M EF++Q+ MDM EMM+D I QVLDE+G+ +
Sbjct: 61 QLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVAQVLDELGLSL 120
Query: 148 ASQLSAAPK--GKIA----SKNTEDASSSGID---ELEKRLAALR 183
+LS P G ++ K E A+S+ +D +LE+RL LR
Sbjct: 121 TDELSNLPSTGGSLSVAASGKKAEAAASALVDADADLEERLKNLR 165
>DICTYBASE|DDB_G0290087 [details] [associations]
symbol:vps2A "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0290087 GO:GO:0015031 GenomeReviews:CM000154_GR
GO:GO:0000815 eggNOG:COG5491 KO:K12191 EMBL:AAFI02000152
RefSeq:XP_635908.2 ProteinModelPortal:Q54GK9 STRING:Q54GK9
EnsemblProtists:DDB0234032 GeneID:8627474 KEGG:ddi:DDB_G0290087
OMA:QDMFEDD Uniprot:Q54GK9
Length = 206
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 44/183 (24%), Positives = 85/183 (46%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
M++E+ L+ E++ + +IK+ AK G K +A L++LR Q+ ++ ++ + ++T
Sbjct: 29 MDRELNRLKIVEQEYIGKIKQLAKAGRNDEAKRMANDLVKLRGQMERMRATKTTLSAVST 88
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
T + A+ ++ Q + + K M E++KQ+ +++MT EMM D
Sbjct: 89 KTTTIKANQTMANAMASATKAMSTMNKQTDLVQLQKTMMEYEKQTQRVEMTEEMMQDMFE 148
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQL-SAAPKGKIASKNTEDASSSGIDELEKRL 179
+V+DE+ +D ++ S A K S T + +EL K L
Sbjct: 149 DDEVDEEADDILS----KVVDEVCLDNYQKMPSVAQKDLPYSSKTSTFKTED-EELNKLL 203
Query: 180 AAL 182
+L
Sbjct: 204 QSL 206
>UNIPROTKB|Q5E994 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0007049 CTD:57132
HOVERGEN:HBG080200 KO:K12197 EMBL:BT021026 EMBL:BC105547
IPI:IPI00713299 RefSeq:NP_001014904.1 UniGene:Bt.803
ProteinModelPortal:Q5E994 GeneID:512033 KEGG:bta:512033
NextBio:20870218 Uniprot:Q5E994
Length = 199
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 50/186 (26%), Positives = 78/186 (41%)
Query: 3 KEIGA----LQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGI 58
KE+G +EEK A+IK+ + GN +I A IR + Q N A++ +
Sbjct: 16 KELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAV 75
Query: 59 ATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDT 118
A Q V M K + +M +F+ Q +D+ T+ M DT
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 119 IXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKR 178
+ ++ DE G+D+ +L P+G+ S T AS+ DEL +R
Sbjct: 136 MSSTTTLTTPQGQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQR 191
Query: 179 LAALRN 184
LA LR+
Sbjct: 192 LARLRD 197
>MGI|MGI:1920159 [details] [associations]
symbol:Chmp1a "charged multivesicular body protein 1A"
species:10090 "Mus musculus" [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000910 "cytokinesis" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005815 "microtubule organizing center" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=ISO] [GO:0012505 "endomembrane system"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0016458 "gene silencing" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0045014 "negative
regulation of transcription by glucose" evidence=ISO] [GO:0045749
"negative regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1920159
GO:GO:0045892 GO:GO:0051301 GO:GO:0016192 GO:GO:0015031
GO:GO:0012505 GO:GO:0006351 GO:GO:0010008 GO:GO:0005815
GO:GO:0000794 GO:GO:0016363 GO:GO:0007076 GO:GO:0005769
GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
GeneTree:ENSGT00550000074957 CTD:5119 ChiTaRS:CHMP1A EMBL:AK046416
EMBL:AK159830 EMBL:BC010524 EMBL:BC023807 EMBL:BC036138
EMBL:BC036152 IPI:IPI00122318 RefSeq:NP_663581.1 UniGene:Mm.41596
ProteinModelPortal:Q921W0 STRING:Q921W0 PhosphoSite:Q921W0
PaxDb:Q921W0 PRIDE:Q921W0 DNASU:234852 Ensembl:ENSMUST00000000759
GeneID:234852 KEGG:mmu:234852 UCSC:uc009nuk.2 InParanoid:Q921W0
OMA:DKFEQQV NextBio:382397 Bgee:Q921W0 CleanEx:MM_CHMP1A
Genevestigator:Q921W0 GermOnline:ENSMUSG00000000743 Uniprot:Q921W0
Length = 196
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHTSVMEDSVS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>RGD|1311083 [details] [associations]
symbol:Chmp1a "charged multivesicular body protein 1A"
species:10116 "Rattus norvegicus" [GO:0000794 "condensed nuclear
chromosome" evidence=IEA;ISO] [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005769 "early endosome" evidence=IEA;ISO]
[GO:0005815 "microtubule organizing center" evidence=IEA;ISO]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;ISO]
[GO:0012505 "endomembrane system" evidence=IEA;ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA;ISO] [GO:0016363 "nuclear matrix"
evidence=IEA;ISO] [GO:0016458 "gene silencing" evidence=IEA;ISO]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IEA;ISO] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1311083 GO:GO:0016192
GO:GO:0015031 GO:GO:0012505 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 KO:K12197 OrthoDB:EOG4PVP0T
GeneTree:ENSGT00550000074957 CTD:5119 IPI:IPI00360574
RefSeq:NP_001076782.1 UniGene:Rn.6239 ProteinModelPortal:D4AE79
PRIDE:D4AE79 Ensembl:ENSRNOT00000021483 GeneID:365024
KEGG:rno:365024 UCSC:RGD:1311083 NextBio:686501 Uniprot:D4AE79
Length = 196
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHTSVMEDSVS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>UNIPROTKB|Q7LBR1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9606 "Homo sapiens" [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 CTD:57132 HOVERGEN:HBG080200 KO:K12197 OMA:EHLFNLK
EMBL:AF306520 EMBL:AF281064 EMBL:BC065933 EMBL:BC012733
IPI:IPI00156984 RefSeq:NP_065145.2 UniGene:Hs.656244 PDB:3EAB
PDBsum:3EAB ProteinModelPortal:Q7LBR1 SMR:Q7LBR1 DIP:DIP-48534N
IntAct:Q7LBR1 MINT:MINT-6946813 PhosphoSite:Q7LBR1 DMDM:73917735
PeptideAtlas:Q7LBR1 PRIDE:Q7LBR1 DNASU:57132
Ensembl:ENST00000526991 GeneID:57132 KEGG:hsa:57132 UCSC:uc002kqe.3
GeneCards:GC18P011851 HGNC:HGNC:24287 MIM:606486 neXtProt:NX_Q7LBR1
PharmGKB:PA142672110 EvolutionaryTrace:Q7LBR1 GenomeRNAi:57132
NextBio:63047 ArrayExpress:Q7LBR1 Bgee:Q7LBR1 CleanEx:HS_C18orf2
CleanEx:HS_CHMP1B Genevestigator:Q7LBR1 Uniprot:Q7LBR1
Length = 199
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMG 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M DT+
Sbjct: 87 KVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S T AS+ DEL +RLA LR+
Sbjct: 147 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQRLARLRD 197
>RGD|1593500 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1593500
GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T EMBL:BC168175 IPI:IPI00764309
UniGene:Rn.39132 STRING:B4F787 UCSC:RGD:1593500
Genevestigator:B4F787 Uniprot:B4F787
Length = 230
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 58 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMG 117
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M DT+
Sbjct: 118 KVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 177
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S T AS+ DEL +RLA LR+
Sbjct: 178 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQRLARLRD 228
>UNIPROTKB|F1NVQ6 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074957 IPI:IPI00582566 OMA:EHLFNLK
EMBL:AADN02013150 Ensembl:ENSGALT00000006500 Uniprot:F1NVQ6
Length = 199
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMG 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M DT+
Sbjct: 87 KVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S T AS+ DEL +RLA LR+
Sbjct: 147 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQRLARLRD 197
>UNIPROTKB|Q32KR9 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045014 "negative regulation of
transcription by glucose" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197
OrthoDB:EOG4PVP0T GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV
EMBL:DAAA02046271 EMBL:BC109956 IPI:IPI00706934
RefSeq:NP_001178189.1 RefSeq:XP_003583421.1 UniGene:Bt.31614
UniGene:Bt.66111 STRING:Q32KR9 Ensembl:ENSBTAT00000047273
Ensembl:ENSBTAT00000047394 GeneID:504669 GeneID:789414
KEGG:bta:504669 KEGG:bta:789414 InParanoid:Q32KR9 NextBio:20929673
Uniprot:Q32KR9
Length = 196
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 45/184 (24%), Positives = 79/184 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQVQNLDVHTSVMEDSMS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLILQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>UNIPROTKB|I3LU89 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045014 "negative regulation of
transcription by glucose" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV EMBL:FP325274
RefSeq:NP_001230289.1 UniGene:Ssc.54250 Ensembl:ENSSSCT00000027461
GeneID:100628127 KEGG:ssc:100628127 Uniprot:I3LU89
Length = 196
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 45/184 (24%), Positives = 80/184 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM +F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDKFEQQVQNLDVHTAVMEDSMS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>MGI|MGI:1914314 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1914314 GO:GO:0005829 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0007049 EMBL:AK014091 EMBL:AK151071
EMBL:CT010307 EMBL:BC002229 IPI:IPI00117187 RefSeq:NP_077152.1
UniGene:Mm.73777 ProteinModelPortal:Q99LU0 SMR:Q99LU0 IntAct:Q99LU0
STRING:Q99LU0 PhosphoSite:Q99LU0 PaxDb:Q99LU0 PRIDE:Q99LU0
GeneID:67064 KEGG:mmu:67064 UCSC:uc008flu.2 CTD:57132
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200
InParanoid:Q99LU0 KO:K12197 OrthoDB:EOG4PVP0T NextBio:323464
CleanEx:MM_CHMP1B Genevestigator:Q99LU0
GermOnline:ENSMUSG00000031242 Uniprot:Q99LU0
Length = 199
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 47/175 (26%), Positives = 74/175 (42%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMSARVDAVAARVQTAVTMG 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M DT+
Sbjct: 87 KVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S T AS+ DEL +RLA LR+
Sbjct: 147 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQRLARLRD 197
>UNIPROTKB|E1BZL2 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 EMBL:AADN02054137
EMBL:AADN02054138 IPI:IPI00679422 RefSeq:NP_001020611.1
UniGene:Gga.12873 Ensembl:ENSGALT00000009948 GeneID:415841
KEGG:gga:415841 NextBio:20819384 ArrayExpress:E1BZL2 Uniprot:E1BZL2
Length = 196
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 43/184 (23%), Positives = 80/184 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM +F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDSMS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G+++ QL+ P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLIVQIAEENGLEIMDQLNQLPEG--ASAVGESSMRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>UNIPROTKB|F1NPS5 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0045014 "negative
regulation of transcription by glucose" evidence=IEA] [GO:0045749
"negative regulation of S phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0016192
GO:GO:0015031 GO:GO:0012505 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 GeneTree:ENSGT00550000074957
OMA:DKFEQQV EMBL:AADN02054137 EMBL:AADN02054138 IPI:IPI00639789
Ensembl:ENSGALT00000033674 ArrayExpress:F1NPS5 Uniprot:F1NPS5
Length = 204
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 43/184 (23%), Positives = 80/184 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 23 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAVAS 82
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM +F++Q +D+ T +M D++
Sbjct: 83 KVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDSMS 142
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G+++ QL+ P+G AS E + S D+L +RLA
Sbjct: 143 SATTLTTPQEQVDSLIVQIAEENGLEIMDQLNQLPEG--ASAVGESSMRSQEDQLSRRLA 200
Query: 181 ALRN 184
ALRN
Sbjct: 201 ALRN 204
>UNIPROTKB|Q9HD42 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0016458 "gene silencing" evidence=IDA] [GO:0000794 "condensed
nuclear chromosome" evidence=IDA] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=IMP] [GO:0005769 "early
endosome" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=IDA] [GO:0005815 "microtubule organizing center"
evidence=IDA] [GO:0012505 "endomembrane system" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045014 "negative
regulation of transcription by glucose" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0008237 "metallopeptidase activity"
evidence=TAS] [GO:0008270 "zinc ion binding" evidence=TAS]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0051301 GO:GO:0016192
GO:GO:0015031 GO:GO:0008270 GO:GO:0012505 GO:GO:0008237
GO:GO:0006351 GO:GO:0010008 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 EMBL:AC010538 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T CTD:5119 EMBL:U58048
EMBL:AF281063 EMBL:D38554 EMBL:BT006841 EMBL:BC007527 EMBL:BC010000
EMBL:BC132711 EMBL:BC132713 IPI:IPI00382452 IPI:IPI01015759
PIR:JC4963 RefSeq:NP_002759.2 UniGene:Hs.589427 PDB:2JQ9 PDB:2YMB
PDB:4A5X PDBsum:2JQ9 PDBsum:2YMB PDBsum:4A5X
ProteinModelPortal:Q9HD42 DIP:DIP-50647N IntAct:Q9HD42
MINT:MINT-6946738 STRING:Q9HD42 PhosphoSite:Q9HD42 DMDM:62510514
PaxDb:Q9HD42 PRIDE:Q9HD42 DNASU:5119 Ensembl:ENST00000397901
GeneID:5119 KEGG:hsa:5119 UCSC:uc002fnu.3 GeneCards:GC16M089710
H-InvDB:HIX0013363 HGNC:HGNC:8740 MIM:164010 neXtProt:NX_Q9HD42
PharmGKB:PA33085 eggNOG:NOG331649 ChiTaRS:CHMP1A
EvolutionaryTrace:Q9HD42 GenomeRNAi:5119 NextBio:19738
ArrayExpress:Q9HD42 Bgee:Q9HD42 CleanEx:HS_CHMP1A
Genevestigator:Q9HD42 Uniprot:Q9HD42
Length = 196
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>MGI|MGI:1914278 [details] [associations]
symbol:2610002M06Rik "RIKEN cDNA 2610002M06 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1914278
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 HOVERGEN:HBG080200 KO:K12197
GermOnline:ENSMUSG00000031242 EMBL:AK011297 EMBL:AK019383
EMBL:AL669851 EMBL:AL844897 EMBL:BC016070 IPI:IPI00173121
RefSeq:NP_080197.2 UniGene:Mm.37274 ProteinModelPortal:Q9CQD4
SMR:Q9CQD4 STRING:Q9CQD4 PRIDE:Q9CQD4 Ensembl:ENSMUST00000120722
GeneID:67028 KEGG:mmu:67028 UCSC:uc009ucj.2
GeneTree:ENSGT00550000074957 InParanoid:Q9CQD4 NextBio:323352
Bgee:Q9CQD4 CleanEx:MM_2610002M06RIK Genevestigator:Q9CQD4
Uniprot:Q9CQD4
Length = 199
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 46/175 (26%), Positives = 73/175 (41%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 27 KEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMG 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M DT+
Sbjct: 87 KVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S AS+ DEL +RLA LR+
Sbjct: 147 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGASVASTEQ-DELSQRLARLRD 197
>RGD|1566265 [details] [associations]
symbol:RGD1566265 "similar to RIKEN cDNA 2610002M06"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1566265
GO:GO:0015031 KO:K12197 GeneTree:ENSGT00550000074957 EMBL:CH473969
RefSeq:NP_001128061.1 UniGene:Rn.8881 SMR:G3V6A6
Ensembl:ENSRNOT00000003188 GeneID:363487 KEGG:rno:363487 CTD:363487
NextBio:683469 Uniprot:G3V6A6
Length = 199
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 46/175 (26%), Positives = 73/175 (41%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 27 KEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMG 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M DT+
Sbjct: 87 KVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S AS+ DEL +RLA LR+
Sbjct: 147 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGASVASTEQ-DELSQRLARLRD 197
>ZFIN|ZDB-GENE-040426-1474 [details] [associations]
symbol:chmp1a "chromatin modifying protein 1A"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-1474 GO:GO:0015031 GO:GO:0010008 GO:GO:0021549
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197
GeneTree:ENSGT00550000074957 EMBL:AY398372 EMBL:BC056577
EMBL:BC067665 IPI:IPI00505457 RefSeq:NP_956857.1 UniGene:Dr.10291
ProteinModelPortal:Q6PHF0 STRING:Q6PHF0 PRIDE:Q6PHF0
Ensembl:ENSDART00000122477 GeneID:393535 KEGG:dre:393535 CTD:5119
NextBio:20814556 ArrayExpress:Q6PHF0 Bgee:Q6PHF0 Uniprot:Q6PHF0
Length = 198
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/184 (22%), Positives = 76/184 (41%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E+ +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LERLAKKAEKDSKSEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM +F+ Q +D+ T +M D++
Sbjct: 75 KVQTALTMKGVAKNMTQVTKALDKALSSMDLQKVSAVMDKFETQVQNLDVHTSVMEDSMS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P G A T + D+L +RLA
Sbjct: 135 SATTLSTPQQQVDDLILQIAEESGLEVEDQLSQLPAGASALGETSARAQEKEDQLSRRLA 194
Query: 181 ALRN 184
ALRN
Sbjct: 195 ALRN 198
>UNIPROTKB|E2RTK6 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045014 "negative regulation of transcription by
glucose" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV EMBL:AAEX03003952
RefSeq:XP_546776.2 Ensembl:ENSCAFT00000037000 GeneID:489656
KEGG:cfa:489656 NextBio:20862808 Uniprot:E2RTK6
Length = 196
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/184 (23%), Positives = 79/184 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ + N ++ A IR + + N +++ +A+
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M+ K + VM F++Q +D+ T +M D++
Sbjct: 75 KVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQVQNLDVHTAVMEDSMS 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QL+ P+G AS E + S D+L +RLA
Sbjct: 135 SATTLTTPQEQVDSLIMQIAEENGLEVLDQLNQLPEG--ASAVGESSVRSQEDQLSRRLA 192
Query: 181 ALRN 184
ALRN
Sbjct: 193 ALRN 196
>UNIPROTKB|Q5ZKX1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
EMBL:AJ719963 IPI:IPI00582566 RefSeq:NP_001006428.1
UniGene:Gga.6697 ProteinModelPortal:Q5ZKX1 STRING:Q5ZKX1
GeneID:422143 KEGG:gga:422143 InParanoid:Q5ZKX1 NextBio:20824822
Uniprot:Q5ZKX1
Length = 199
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/175 (26%), Positives = 74/175 (42%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK A+IK+ + GN +I A IR + Q N A++ +A Q
Sbjct: 27 KEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMG 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F+ Q +D+ T+ M +T+
Sbjct: 87 KVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMENTMSNTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S T AS+ DEL +RLA LR+
Sbjct: 147 NQVDMLLQEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQRLARLRD 197
>ZFIN|ZDB-GENE-030131-8370 [details] [associations]
symbol:chmp1b "chromatin modifying protein 1B"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-030131-8370
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T EMBL:AY398326
EMBL:BC045934 EMBL:BC065462 EMBL:BC067569 IPI:IPI00508359
RefSeq:NP_956308.1 UniGene:Dr.8435 ProteinModelPortal:Q7ZVB1
STRING:Q7ZVB1 PRIDE:Q7ZVB1 GeneID:336426 KEGG:dre:336426
InParanoid:Q7ZVB1 OMA:EHLFNLK NextBio:20811727 Uniprot:Q7ZVB1
Length = 199
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 44/175 (25%), Positives = 74/175 (42%)
Query: 10 QEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHS 69
+EEK ++K+ + GN +I A IR + Q N A++ +A Q +
Sbjct: 27 KEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLRMSARVDAVAARVQTAVTMN 86
Query: 70 SVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXX 129
V M K + +M +F++Q +D+ T M D++
Sbjct: 87 QVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDVQTAQMEDSMSSTTTLTTPQ 146
Query: 130 XXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLAALRN 184
++ DE G+D+ +L P+G+ S T AS+ DEL +RLA LR+
Sbjct: 147 GQVDTLMMEMADEAGLDLNMEL---PQGQTGSVGTSVASAEQ-DELSQRLAKLRD 197
>RGD|1306781 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1306781 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737
IPI:IPI00766292 Ensembl:ENSRNOT00000000904 Uniprot:F1M8B7
Length = 107
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/97 (32%), Positives = 57/97 (58%)
Query: 88 QMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDV 147
+M+P K + M+ FQK++ +M+MT EM++DT+ QVLDEIG+++
Sbjct: 9 KMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEI 68
Query: 148 ASQLSAAPKG--KIASKNTEDASSSGIDELEKRLAAL 182
+ +++ AP + S +T A+ S +E+E++L AL
Sbjct: 69 SGKMAKAPSAARSLPSASTSKATISD-EEIERQLKAL 104
>FB|FBgn0036805 [details] [associations]
symbol:Chmp1 "Chmp1" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014296 GO:GO:0015031 eggNOG:COG5491 KO:K12197
GeneTree:ENSGT00550000074957 OMA:AKMATIT EMBL:AY060798
RefSeq:NP_649051.3 UniGene:Dm.3851 STRING:Q95SH2
EnsemblMetazoa:FBtr0075092 GeneID:40036 KEGG:dme:Dmel_CG4108
UCSC:CG4108-RA CTD:40036 FlyBase:FBgn0036805 InParanoid:Q95SH2
OrthoDB:EOG4GTHW3 GenomeRNAi:40036 NextBio:816669 Uniprot:Q95SH2
Length = 203
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 43/183 (23%), Positives = 75/183 (40%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E+ ++EEK A+ K+ + GN +I A IR + Q N A++ +A+
Sbjct: 20 LERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLRMSARVDAVAS 79
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q+ V M K + +M +F+ Q +D+ + +M T+
Sbjct: 80 RVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVMEGTMS 139
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
QV DE G+++ +L + + + +T A S DEL +RLA
Sbjct: 140 DTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVGAST--AVSQEQDELTQRLA 197
Query: 181 ALR 183
LR
Sbjct: 198 RLR 200
>DICTYBASE|DDB_G0267394 [details] [associations]
symbol:vps46 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0045324 "late endosome to vacuole transport" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0267394 GenomeReviews:CM000150_GR EMBL:AAFI02000003
GO:GO:0010008 GO:GO:0005770 GO:GO:0006623 GO:GO:0045324
eggNOG:COG5491 KO:K12197 OMA:EHLFNLK EMBL:AF081802
RefSeq:XP_647634.1 ProteinModelPortal:O96552 STRING:O96552
PRIDE:O96552 EnsemblProtists:DDB0191317 GeneID:8616449
KEGG:ddi:DDB_G0267394 Uniprot:O96552
Length = 192
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 37/178 (20%), Positives = 76/178 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK+ +Q EK ++K+ + GN +I A+ IR + Q N ++I +A+
Sbjct: 15 LEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYLRLASRIDAVAS 74
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
+ SV M+ K +VM +F++Q +D+ + + + +
Sbjct: 75 RVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDLDVQSVYVENAMN 134
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKR 178
QV DE G++V Q+ +AP K+ T++ + ++ L+++
Sbjct: 135 QTTTLSTPADQVDLLISQVADEHGLNVGMQMGSAPSEKVQQGETDELTER-LNRLKQK 191
>UNIPROTKB|F8VVT7 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 HGNC:HGNC:8740 ChiTaRS:CHMP1A IPI:IPI01022543
ProteinModelPortal:F8VVT7 Ensembl:ENST00000550102
ArrayExpress:F8VVT7 Bgee:F8VVT7 Uniprot:F8VVT7
Length = 187
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/184 (24%), Positives = 77/184 (41%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++ K A++K+ N ++ A IR + + N +++ +A
Sbjct: 15 LEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVA- 73
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
S V M+ K + VM F++Q +D+ T +M D++
Sbjct: 74 --------SKVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMS 125
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
Q+ +E G++V QLS P+G AS E + S D+L +RLA
Sbjct: 126 SATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQEDQLSRRLA 183
Query: 181 ALRN 184
ALRN
Sbjct: 184 ALRN 187
>UNIPROTKB|Q58CS7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491
EMBL:BT021870 EMBL:BC114072 IPI:IPI00688889 RefSeq:NP_001030223.2
UniGene:Bt.28232 ProteinModelPortal:Q58CS7 SMR:Q58CS7 STRING:Q58CS7
Ensembl:ENSBTAT00000018071 GeneID:507722 KEGG:bta:507722 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 InParanoid:Q58CS7 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB NextBio:20868194 Uniprot:Q58CS7
Length = 222
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 30 VDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIASKNTEDASSS 170
++L EI G S+++ A P G +A+ E+
Sbjct: 149 ESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPLGAMAASEDEEEEEE 208
Query: 171 GIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 209 ALEAMQSRLATLRS 222
>TAIR|locus:2172686 [details] [associations]
symbol:VPS24.1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AB005243
EMBL:AY054614 EMBL:AY128742 EMBL:AF083749 EMBL:AK220831
IPI:IPI00546218 RefSeq:NP_197686.1 UniGene:At.8736
ProteinModelPortal:Q9FFB3 SMR:Q9FFB3 IntAct:Q9FFB3 STRING:Q9FFB3
PaxDb:Q9FFB3 PRIDE:Q9FFB3 EnsemblPlants:AT5G22950.1 GeneID:832359
KEGG:ath:AT5G22950 TAIR:At5g22950 InParanoid:Q9FFB3 OMA:MKIVNNL
PhylomeDB:Q9FFB3 ProtClustDB:CLSN2686097 Genevestigator:Q9FFB3
Uniprot:Q9FFB3
Length = 229
Score = 138 (53.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 42/191 (21%), Positives = 83/191 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+E++I +Q+EE+ + IK AK + + K LA++++ R+ + L ++AQ+ I+
Sbjct: 32 IERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISM 91
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
H A + M+ + A M+EF K+ + + E +++ I
Sbjct: 92 HLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAID 151
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAA--------PKGKIASKNTEDASSSGI 172
+VL I + A++L A P K ++ E+A + G+
Sbjct: 152 NALDSEDMEEEIDEEVDKVLTAIAGETAAELPVAVRKERIKVPAQKASTSREEEAVAEGV 211
Query: 173 DELEKRLAALR 183
D+ E+ L +R
Sbjct: 212 DD-EEELEEIR 221
>UNIPROTKB|Q9Y3E7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0006915 EMBL:CH471053 GO:GO:0031902 GO:GO:0015031
GO:GO:0016197 GO:GO:0007049 GO:GO:0000910 GO:GO:0005546
GO:GO:0008333 GO:GO:0030496 GO:GO:0005769 GO:GO:0051036
GO:GO:0016044 EMBL:AC064848 eggNOG:COG5491 CTD:51652
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AF219226 EMBL:AY364249 EMBL:AF151907
EMBL:AK290725 EMBL:AK294389 EMBL:AK312353 EMBL:AK315835
EMBL:AC015971 EMBL:AC068288 EMBL:BC004419 IPI:IPI00100673
IPI:IPI00478935 IPI:IPI00979305 IPI:IPI00981241
RefSeq:NP_001005753.1 RefSeq:NP_001180446.1 RefSeq:NP_001185883.1
RefSeq:NP_057163.1 UniGene:Hs.591582 PDB:2GD5 PDB:2XZE PDB:3FRT
PDB:3FRV PDBsum:2GD5 PDBsum:2XZE PDBsum:3FRT PDBsum:3FRV
ProteinModelPortal:Q9Y3E7 SMR:Q9Y3E7 DIP:DIP-48532N IntAct:Q9Y3E7
MINT:MINT-1185988 STRING:Q9Y3E7 PhosphoSite:Q9Y3E7 DMDM:73917763
PaxDb:Q9Y3E7 PRIDE:Q9Y3E7 DNASU:51652 Ensembl:ENST00000263856
Ensembl:ENST00000409225 Ensembl:ENST00000409727
Ensembl:ENST00000439940 GeneID:100526767 GeneID:51652
KEGG:hsa:100526767 KEGG:hsa:51652 UCSC:uc002srj.3 CTD:100526767
GeneCards:GC02M086730 HGNC:HGNC:29865 HPA:HPA015673 MIM:610052
neXtProt:NX_Q9Y3E7 PharmGKB:PA134920495 PhylomeDB:Q9Y3E7
ChiTaRS:CHMP3 EvolutionaryTrace:Q9Y3E7 NextBio:55614 Bgee:Q9Y3E7
CleanEx:HS_VPS24 Genevestigator:Q9Y3E7 GermOnline:ENSG00000115561
Uniprot:Q9Y3E7
Length = 222
Score = 137 (53.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 30 VDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIASKNTEDASSS 170
++L EI G S+++ A P G +A+ E+
Sbjct: 149 ESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEE 208
Query: 171 GIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 209 ALEAMQSRLATLRS 222
>ZFIN|ZDB-GENE-040426-2600 [details] [associations]
symbol:chmp3 "charged multivesicular body protein
3" species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2600
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:BC066696 IPI:IPI00491816 RefSeq:NP_998485.1 UniGene:Dr.48763
ProteinModelPortal:Q6NY88 SMR:Q6NY88 STRING:Q6NY88 PRIDE:Q6NY88
Ensembl:ENSDART00000055487 GeneID:406621 KEGG:dre:406621
InParanoid:Q6NY88 NextBio:20818164 Bgee:Q6NY88 Uniprot:Q6NY88
Length = 221
Score = 135 (52.6 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 47/193 (24%), Positives = 85/193 (44%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ IK AK G + ILA+++I+ ++ I L S+AQ+ +
Sbjct: 30 IDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMIQSKRAINKLYASKAQMNSVLL 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ + V ++ P QA MR+ K+ + + EM+ DT+
Sbjct: 90 SMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQA-TMRDLSKEMMKAGIIEEMLEDTL 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAAPK----GKIASKNTEDASSSG 171
++L EI G S+++ P G A+ E
Sbjct: 149 EGMDDEEEMEEAAEAEVDKILFEITAGALGKAPSKVTDLPDPVAIGATAAPEEESEEEEE 208
Query: 172 IDELEKRLAALRN 184
I+E++ RLAALR+
Sbjct: 209 IEEMQSRLAALRS 221
>UNIPROTKB|F1SVC7 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 EMBL:CU467088
Ensembl:ENSSSCT00000009004 Uniprot:F1SVC7
Length = 217
Score = 131 (51.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 26 VDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLM 85
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 86 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 144
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIASKNTEDASSS 170
++L EI G S+++ A P G +A+ E+ +
Sbjct: 145 ESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEA 204
Query: 171 GIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 205 -LEAMQSRLATLRS 217
>UNIPROTKB|I3LFQ9 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:CU467088
RefSeq:XP_003354782.1 Ensembl:ENSSSCT00000031530 GeneID:100522249
KEGG:ssc:100522249 Uniprot:I3LFQ9
Length = 221
Score = 131 (51.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 30 VDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIASKNTEDASSS 170
++L EI G S+++ A P G +A+ E+ +
Sbjct: 149 ESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEA 208
Query: 171 GIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 209 -LEAMQSRLATLRS 221
>RGD|708556 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IC] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IMP]
[GO:0005769 "early endosome" evidence=IDA] [GO:0005770 "late
endosome" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030496 "midbody" evidence=IDA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0051036 "regulation of
endosome size" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
RGD:708556 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0005770
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 GO:GO:0000815
eggNOG:COG5491 CTD:51652 GeneTree:ENSGT00550000074896
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AY150169 IPI:IPI00192445 RefSeq:NP_758834.1
UniGene:Rn.162751 ProteinModelPortal:Q8CGS4 SMR:Q8CGS4
STRING:Q8CGS4 PhosphoSite:Q8CGS4 Ensembl:ENSRNOT00000010253
GeneID:282834 KEGG:rno:282834 UCSC:RGD:708556 InParanoid:Q8CGS4
NextBio:624897 Genevestigator:Q8CGS4 GermOnline:ENSRNOG00000007356
Uniprot:Q8CGS4
Length = 223
Score = 131 (51.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/195 (23%), Positives = 86/195 (44%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 30 VDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIA-SKNTEDASS 169
++L EI G S+++ A P G +A S+ E+
Sbjct: 149 ESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPAGAMAASEGDEEDDE 208
Query: 170 SGIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 209 EDLEAMQSRLATLRS 223
>UNIPROTKB|E1C230 [details] [associations]
symbol:VPS24 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK CTD:40542
EMBL:AADN02014773 IPI:IPI00579079 RefSeq:XP_420858.2
UniGene:Gga.12935 Ensembl:ENSGALT00000025484 GeneID:422918
KEGG:gga:422918 NextBio:20825474 Uniprot:E1C230
Length = 218
Score = 130 (50.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 49/194 (25%), Positives = 83/194 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ IK AK G + ILA++LIR R+ ++ L S+A + +
Sbjct: 30 IDRQIRDIQREEEKVKRSIKDAAKKGQKDVCVILAKELIRSRKAVSKLYASKAHMNSVLM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTED---ASSSGIDE-- 174
++L EI A L AP K+ E +++ +DE
Sbjct: 149 ESMEDEEEMEEEAEMEIDKILFEI---TAGALGKAPS-KVTDALPEPEAMGAAAAVDEEE 204
Query: 175 ----LEKRLAALRN 184
++ RLA LR+
Sbjct: 205 DIEAMQSRLATLRS 218
>UNIPROTKB|F5H875 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 IPI:IPI01015759 HGNC:HGNC:8740 ChiTaRS:CHMP1A
ProteinModelPortal:F5H875 SMR:F5H875 Ensembl:ENST00000535997
ArrayExpress:F5H875 Bgee:F5H875 Uniprot:F5H875
Length = 132
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/132 (26%), Positives = 57/132 (43%)
Query: 53 AQIRGIATHTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTT 112
+++ +A+ Q V M+ K + VM F++Q +D+ T
Sbjct: 3 SRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHT 62
Query: 113 EMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGI 172
+M D++ Q+ +E G++V QLS P+G AS E + S
Sbjct: 63 SVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEG--ASAVGESSVRSQE 120
Query: 173 DELEKRLAALRN 184
D+L +RLAALRN
Sbjct: 121 DQLSRRLAALRN 132
>UNIPROTKB|E2RDX0 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 OMA:NIDRQIR EMBL:AAEX03010929
Ensembl:ENSCAFT00000011979 NextBio:20851539 Uniprot:E2RDX0
Length = 292
Score = 132 (51.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 101 VDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSRKAVSKLYASKAHMNSVLM 160
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 161 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 219
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIASKNTEDASSS 170
++L EI G S+++ A P G +A+ E+ +
Sbjct: 220 ESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPEPSGAMAASEDEEEEEA 279
Query: 171 GIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 280 -LEAMQSRLATLRS 292
>WB|WBGene00020866 [details] [associations]
symbol:T27F7.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0015031
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0019915
eggNOG:COG5491 GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
KO:K12193 OMA:MSKEMMK EMBL:FO081509 NextBio:881441
RefSeq:NP_494919.1 ProteinModelPortal:Q9GYK4 SMR:Q9GYK4
IntAct:Q9GYK4 STRING:Q9GYK4 PaxDb:Q9GYK4 EnsemblMetazoa:T27F7.1.1
EnsemblMetazoa:T27F7.1.2 EnsemblMetazoa:T27F7.1.3 GeneID:173863
KEGG:cel:CELE_T27F7.1 UCSC:T27F7.1.1 CTD:173863 WormBase:T27F7.1
InParanoid:Q9GYK4 Uniprot:Q9GYK4
Length = 208
Score = 127 (49.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 29/119 (24%), Positives = 60/119 (50%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+++++ ++Q+EE+K+ EIK AK G++ ILA+ +I+ R+ I+ + S+AQI +
Sbjct: 28 LDRQVYSIQREEQKVTKEIKEAAKKGDKDVCLILAKSMIQSRKAISKIHVSKAQINSVIM 87
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
Q A + ++ + K MRE + ++ + EM+ +T+
Sbjct: 88 CMQEQLATIRMAGSLQKSTEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEETL 146
>WB|WBGene00017735 [details] [associations]
symbol:F23C8.6 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0015031 GO:GO:0040011
eggNOG:COG5491 HOGENOM:HOG000241980 KO:K12197
GeneTree:ENSGT00550000074957 EMBL:FO081207 OMA:AKMATIT PIR:T33826
RefSeq:NP_490974.1 ProteinModelPortal:Q9TXI3 STRING:Q9TXI3
PaxDb:Q9TXI3 EnsemblMetazoa:F23C8.6 GeneID:171801
KEGG:cel:CELE_F23C8.6 UCSC:F23C8.6 CTD:171801 WormBase:F23C8.6
InParanoid:Q9TXI3 NextBio:872753 Uniprot:Q9TXI3
Length = 205
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 39/184 (21%), Positives = 70/184 (38%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+EK +++EK ++ K GN+ ++ A IR + + N A+I +A
Sbjct: 24 LEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEAVNYIKMAARIDAVAA 83
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M K ++M F++ +D+TT+ M T+
Sbjct: 84 RVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFEDLDVTTKTMEKTMD 143
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
+ D+ G+++ +L P + T + S +L +RLA
Sbjct: 144 GTTVLNAPKSQVDALIAEAADKAGIELNQEL---PSNVPTALPTGTQAVSEDKDLTERLA 200
Query: 181 ALRN 184
ALRN
Sbjct: 201 ALRN 204
>MGI|MGI:1913950 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005770 "late endosome" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030496 "midbody" evidence=ISO]
[GO:0051036 "regulation of endosome size" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1913950 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:AK009414 EMBL:AK014818 EMBL:AK016677 EMBL:AK018611
EMBL:AK083562 EMBL:BC049964 IPI:IPI00347275 RefSeq:NP_080059.2
UniGene:Mm.181278 ProteinModelPortal:Q9CQ10 SMR:Q9CQ10
IntAct:Q9CQ10 STRING:Q9CQ10 PhosphoSite:Q9CQ10 PaxDb:Q9CQ10
PRIDE:Q9CQ10 Ensembl:ENSMUST00000059462 Ensembl:ENSMUST00000065364
GeneID:66700 KEGG:mmu:66700 UCSC:uc009cgw.1 InParanoid:Q9CQ10
NextBio:322405 Bgee:Q9CQ10 CleanEx:MM_VPS24 Genevestigator:Q9CQ10
GermOnline:ENSMUSG00000053119 Uniprot:Q9CQ10
Length = 224
Score = 127 (49.8 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 45/196 (22%), Positives = 86/196 (43%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I +Q+EE+K+ +K AK G + +LA+++IR R+ ++ L S+A + +
Sbjct: 30 VDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSRKAVSKLYASKAHMNSVLM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQME-PAKQAKVMREFQKQSAQMDMTTEMMSDTI 119
+ A V ++ P QA MRE K+ + + EM+ DT
Sbjct: 90 GMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQA-TMRELSKEMMKAGIIEEMLEDTF 148
Query: 120 XXXXXXXXXXXXXXXXXXQVLDEI--GV--DVASQLSAA-----PKGKIAS--KNTEDAS 168
++L EI G S+++ A P G +A+ + E+
Sbjct: 149 ESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEPEPAGAMAASEEGEEEED 208
Query: 169 SSGIDELEKRLAALRN 184
++ ++ RLA LR+
Sbjct: 209 EEDLEAMQSRLATLRS 224
>TAIR|locus:2032607 [details] [associations]
symbol:VPS46.2 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS;RCA] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0032509 "endosome transport via
multivesicular body sorting pathway" evidence=IGI] [GO:0040007
"growth" evidence=IGI] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002684 GO:GO:0040007 GO:GO:0015031 GO:GO:0009793
EMBL:AC008017 GO:GO:0000578 KO:K12197 OMA:EHLFNLK GO:GO:0032509
ProtClustDB:CLSN2682103 UniGene:At.22952 UniGene:At.71264
EMBL:AY059851 EMBL:AY081673 IPI:IPI00527973 PIR:G96755
RefSeq:NP_565053.1 ProteinModelPortal:Q9SSM4 IntAct:Q9SSM4
STRING:Q9SSM4 PRIDE:Q9SSM4 EnsemblPlants:AT1G73030.1 GeneID:843634
KEGG:ath:AT1G73030 TAIR:At1g73030 InParanoid:Q9SSM4
PhylomeDB:Q9SSM4 ArrayExpress:Q9SSM4 Genevestigator:Q9SSM4
Uniprot:Q9SSM4
Length = 203
Score = 123 (48.4 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 36/183 (19%), Positives = 70/183 (38%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++ ++EEK ++K+ + GN +I A IR R + N +++ +
Sbjct: 21 LQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLASRLDAVVA 80
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
+++ K ++ M F+KQ M++ E M + +
Sbjct: 81 RLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMENAMA 140
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
QV D+ G++V+ L P G TE+ D+L +RLA
Sbjct: 141 GSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAGHAIPTKTEEKVDE--DDLSRRLA 197
Query: 181 ALR 183
L+
Sbjct: 198 ELK 200
>TAIR|locus:2007883 [details] [associations]
symbol:VPS46.1 "vacuolar protein sorting 46.1"
species:3702 "Arabidopsis thaliana" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
[GO:0032509 "endosome transport via multivesicular body sorting
pathway" evidence=IGI] [GO:0040007 "growth" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002684 GO:GO:0040007 GO:GO:0015031
GO:GO:0000578 eggNOG:COG5491 KO:K12197 GO:GO:0032509 OMA:AKMATIT
EMBL:AY085606 EMBL:AK118350 IPI:IPI00533081 RefSeq:NP_173215.1
UniGene:At.41817 IntAct:Q8LE58 STRING:Q8LE58
EnsemblPlants:AT1G17730.1 GeneID:838349 KEGG:ath:AT1G17730
TAIR:At1g17730 InParanoid:Q8LE58 ProtClustDB:CLSN2682103
Genevestigator:Q8LE58 Uniprot:Q8LE58
Length = 203
Score = 122 (48.0 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 39/185 (21%), Positives = 74/185 (40%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++ ++EE+ ++K+ + GN +I A IR R + N +++ +
Sbjct: 21 LQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLSSRLDAVVA 80
Query: 61 H--TQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDT 118
TQA A + ++ K ++ M F+KQ M++ E M +
Sbjct: 81 RLDTQAKMATITKSMTNIVKSLESSLTTGNLQ--KMSETMDSFEKQFVNMEVQAEFMDNA 138
Query: 119 IXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKR 178
+ QV D+ G++V+ L P G TE+ D+L +R
Sbjct: 139 MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAGHAIPTKTEEKVEE--DDLTRR 195
Query: 179 LAALR 183
LA L+
Sbjct: 196 LAELK 200
>CGD|CAL0000893 [details] [associations]
symbol:orf19.4307 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005770 "late endosome" evidence=IEA] [GO:0032511
"late endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0000893
GO:GO:0005739 GO:GO:0015031 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:COG5491 KO:K12197 RefSeq:XP_720614.1 RefSeq:XP_720742.1
ProteinModelPortal:Q5AG72 STRING:Q5AG72 GeneID:3637690
GeneID:3637809 KEGG:cal:CaO19.11783 KEGG:cal:CaO19.4307
Uniprot:Q5AG72
Length = 292
Score = 124 (48.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/185 (23%), Positives = 74/185 (40%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+ ++ +EE + A+IK+ GN ++ A+ IR + NL ++I +A+
Sbjct: 109 LNRQATKASKEELQEKAKIKKALSQGNNDIAQLYAQNAIRKSNERINLLRLASRIDAVAS 168
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q SV M + + VM +F+ Q +D +T T
Sbjct: 169 RVQTAVTMRSVTGNMTQVIRGMDKALQTMNLERISLVMDKFETQFEDLDASTNYYETTTN 228
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDA-SSSGIDELEKRL 179
QV DE G+++ L+A K +I S ++ S D+L +RL
Sbjct: 229 NVNALTTPQDQVDELLNQVADEAGIEMKQGLNAT-KVEITSPVAPNSISEEKEDKLAERL 287
Query: 180 AALRN 184
ALRN
Sbjct: 288 RALRN 292
>UNIPROTKB|Q5AG72 [details] [associations]
symbol:DID2 "Putative uncharacterized protein DID2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0000893
GO:GO:0005739 GO:GO:0015031 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:COG5491 KO:K12197 RefSeq:XP_720614.1 RefSeq:XP_720742.1
ProteinModelPortal:Q5AG72 STRING:Q5AG72 GeneID:3637690
GeneID:3637809 KEGG:cal:CaO19.11783 KEGG:cal:CaO19.4307
Uniprot:Q5AG72
Length = 292
Score = 124 (48.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/185 (23%), Positives = 74/185 (40%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
+ ++ +EE + A+IK+ GN ++ A+ IR + NL ++I +A+
Sbjct: 109 LNRQATKASKEELQEKAKIKKALSQGNNDIAQLYAQNAIRKSNERINLLRLASRIDAVAS 168
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q SV M + + VM +F+ Q +D +T T
Sbjct: 169 RVQTAVTMRSVTGNMTQVIRGMDKALQTMNLERISLVMDKFETQFEDLDASTNYYETTTN 228
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDA-SSSGIDELEKRL 179
QV DE G+++ L+A K +I S ++ S D+L +RL
Sbjct: 229 NVNALTTPQDQVDELLNQVADEAGIEMKQGLNAT-KVEITSPVAPNSISEEKEDKLAERL 287
Query: 180 AALRN 184
ALRN
Sbjct: 288 RALRN 292
>TAIR|locus:2075924 [details] [associations]
symbol:VPS24.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0000815
"ESCRT III complex" evidence=ISS] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AL353992
IPI:IPI00548688 PIR:T48976 RefSeq:NP_190086.1 UniGene:At.53746
ProteinModelPortal:Q9LXH5 SMR:Q9LXH5 EnsemblPlants:AT3G45000.1
GeneID:823635 KEGG:ath:AT3G45000 TAIR:At3g45000 InParanoid:Q9LXH5
OMA:AFSKEMT PhylomeDB:Q9LXH5 ArrayExpress:Q9LXH5
Genevestigator:Q9LXH5 Uniprot:Q9LXH5
Length = 200
Score = 117 (46.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/184 (22%), Positives = 75/184 (40%)
Query: 8 LQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHA 67
+++EE+ + IK + K + K LAR+++ R+ + L ++AQ+ I+ H A
Sbjct: 10 IEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIA 69
Query: 68 HSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXX 127
+ M+ + A M+ F K+ + + E +SD +
Sbjct: 70 TAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSED 129
Query: 128 XXXXXXXXXXQVLDEIGVDVASQLSAA--------PKGKIASKNTEDASSSGIDELEKRL 179
+VL I + A++L A P K + + EDA G+D E+ L
Sbjct: 130 IEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDA-EEEL 188
Query: 180 AALR 183
A+R
Sbjct: 189 EAIR 192
>UNIPROTKB|H9L0W3 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 GeneTree:ENSGT00550000074737
EMBL:AADN02053084 EMBL:AADN02053085 Ensembl:ENSGALT00000029274
OMA:EMMNDAT Uniprot:H9L0W3
Length = 104
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 96 KVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 155
K+M EF+KQ+ MDM E+M+D I QVLDE+G+++ +L+ P
Sbjct: 8 KIMMEFEKQAEIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELATLP 67
Query: 156 K--GKIASKN--TEDASSSGID---ELEKRLAALR 183
G +A+ +A+++ D +LE+RL LR
Sbjct: 68 PPGGSLAAGEGRAAEAAAALADADADLEERLKNLR 102
>FB|FBgn0037231 [details] [associations]
symbol:vps24 "Charged multivesicular body protein 3"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 EMBL:AE014297
GO:GO:0006911 GO:GO:0015031 eggNOG:COG5491
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:AY058381
RefSeq:NP_649451.1 UniGene:Dm.20141 SMR:Q9VN02 IntAct:Q9VN02
MINT:MINT-896357 STRING:Q9VN02 EnsemblMetazoa:FBtr0078958
GeneID:40542 KEGG:dme:Dmel_CG9779 UCSC:CG9779-RA CTD:40542
FlyBase:FBgn0037231 InParanoid:Q9VN02 OrthoDB:EOG4Z614S
GenomeRNAi:40542 NextBio:819274 Uniprot:Q9VN02
Length = 223
Score = 116 (45.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 38/194 (19%), Positives = 82/194 (42%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++++I ++Q+EE+K+ +K+ A+ + ILA++++ R+ I + S+A + I
Sbjct: 30 LDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEIVNARKAINRIYTSKAHLNSIQM 89
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
+ + V + + A +MR+ K+ + + EM+ +T+
Sbjct: 90 QMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIMRDMSKEMMKAGIIEEMLDETMD 149
Query: 121 XXXXXXXXXXXXXXXXXQVLDEI--G----VDVASQLSAAPKGKIASKNTE----DASSS 170
+VL EI G + + + A K ++ E D
Sbjct: 150 SLEESEELEEEASKEVDKVLWEITDGKLGEAPLPPEATPADKASASAARVEAEQDDEEGE 209
Query: 171 GIDELEKRLAALRN 184
+ E++ RLA+LR+
Sbjct: 210 ELQEMQSRLASLRS 223
>DICTYBASE|DDB_G0284769 [details] [associations]
symbol:vps24 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0284769 GenomeReviews:CM000153_GR EMBL:AAFI02000071
GO:GO:0015031 GO:GO:0000815 eggNOG:COG5491 KO:K12193 OMA:MSKEMMK
RefSeq:XP_638395.1 ProteinModelPortal:Q54P63 STRING:Q54P63
PRIDE:Q54P63 EnsemblProtists:DDB0234036 GeneID:8624764
KEGG:ddi:DDB_G0284769 InParanoid:Q54P63 ProtClustDB:CLSZ2437297
Uniprot:Q54P63
Length = 207
Score = 111 (44.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 39/184 (21%), Positives = 76/184 (41%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++ ++ A+ +EKK V IK K G++ + K LA++++ R+ + ++AQ+ ++
Sbjct: 28 LDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTLAKEIVNSRKAKERIYTAKAQMNSVSM 87
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q+ A + V ++ + KVM + + + EM+SD
Sbjct: 88 QLQSNLAMTKVQGNLAKSTEIMKMMNDLIKLPELNKVMMAMGSEMTKAGIMEEMISDVFD 147
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSSGIDELEKRLA 180
+++DEI V Q+S+AP + EL RL
Sbjct: 148 MQGEDLEEEAEMEVN--KIMDEILVS-GPQVSSAPLETHQQEEVVQEKQED-SELLDRLK 203
Query: 181 ALRN 184
AL++
Sbjct: 204 ALKS 207
>SGD|S000006435 [details] [associations]
symbol:DID2 "Class E protein of the vacuolar protein-sorting
(Vps) pathway" species:4932 "Saccharomyces cerevisiae" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0032511 "late endosome to vacuole transport via multivesicular
body sorting pathway" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005770 "late endosome"
evidence=IDA] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000006435 GO:GO:0012505
EMBL:BK006944 GO:GO:0010008 GO:GO:0005770 GO:GO:0006623
eggNOG:COG5491 HOGENOM:HOG000241980 KO:K12197
GeneTree:ENSGT00550000074957 GO:GO:0032511 OrthoDB:EOG42Z80Q
EMBL:Z28260 RefSeq:NP_012961.3 RefSeq:NP_012963.3 PDB:3GGZ
PDBsum:3GGZ ProteinModelPortal:P69771 IntAct:P69771
MINT:MINT-4493543 STRING:P69771 PaxDb:P69771 EnsemblFungi:YKR035W-A
GeneID:853906 GeneID:853909 KEGG:sce:YKR035W-A KEGG:sce:YKR037C
CYGD:YKR035w-a KO:K11573 EvolutionaryTrace:P69771 NextBio:975236
Genevestigator:P69771 GermOnline:YKR035W-A Uniprot:P69771
Length = 204
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/185 (21%), Positives = 74/185 (40%)
Query: 1 MEKEIGALQQEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIAT 60
++K+ +EEK+ ++KR A NE ++I A IR + + L +++ +A+
Sbjct: 23 LQKQANKASKEEKQETNKLKR-ALNENEDISRIYASNAIRKKNERLQLLKLASRVDSVAS 81
Query: 61 HTQAMHAHSSVXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIX 120
Q V M + +M +F++Q +D + + D
Sbjct: 82 RVQTAVTMRQVSASMGQVCKGMDKALQNMNLQQITMIMDKFEQQFEDLDTSVNVYEDMGV 141
Query: 121 XXXXXXXXXXXXXXXXXQVLDEIGVDV--ASQLSAAPKGKIASKNTEDASSSGIDELEKR 178
+V DE G+++ +++L P+ K N +D D+L +R
Sbjct: 142 NSDAMLVDNDKVDELMSKVADENGMELKQSAKLDNVPEIKAKEVNVDDEKE---DKLAQR 198
Query: 179 LAALR 183
L ALR
Sbjct: 199 LRALR 203
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.122 0.307 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 185 151 0.00097 104 3 10 23 0.38 32
30 0.40 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 518 (55 KB)
Total size of DFA: 132 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.34u 0.11s 17.45t Elapsed: 00:00:01
Total cpu time: 17.35u 0.11s 17.46t Elapsed: 00:00:01
Start: Mon May 20 15:07:18 2013 End: Mon May 20 15:07:19 2013