BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029929
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XER8|RAB7_GOSHI Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1
Length = 207
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/184 (96%), Positives = 183/184 (99%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF+DRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DVNVMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+AAFECIA+NALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNE 180
Query: 181 PQEE 184
P+EE
Sbjct: 181 PEEE 184
>sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1
Length = 207
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/184 (95%), Positives = 181/184 (98%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSF+NLNNWREEFLIQA+PSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+ AF+CIAKNAL NE
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNE 180
Query: 181 PQEE 184
P+EE
Sbjct: 181 PEEE 184
>sp|Q9C820|RAG3D_ARATH Ras-related protein RABG3d OS=Arabidopsis thaliana GN=RABG3D PE=2
SV=1
Length = 206
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/184 (94%), Positives = 180/184 (97%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+SRRR+LLKVIILGDSGVGKTSLMNQ+VNRKFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNKTDVDGG SRVVSEKKAKAWCASKGNIPYFETSAKEGFNV+AAFECI KNA KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 181 PQEE 184
P+EE
Sbjct: 181 PEEE 184
>sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1
Length = 206
Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/184 (94%), Positives = 178/184 (96%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFDNLNNWREEFLIQASPSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
V+LGNK DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEG NVE AF+CI KNALKNE
Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNE 180
Query: 181 PQEE 184
P+EE
Sbjct: 181 PEEE 184
>sp|Q9LW76|RAG3C_ARATH Ras-related protein RABG3c OS=Arabidopsis thaliana GN=RABG3C PE=2
SV=1
Length = 206
Score = 358 bits (918), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 170/184 (92%), Positives = 180/184 (97%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRR+LLKVIILGDSGVGKTSLMNQ+VNRKFSNQYKATIGADFLTKEVQ +DR+FTLQ
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV DVNVMKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNKTDVDGG SRVV+EKKAK+WCASKGNIPYFETSAK+G NV+AAFECIAKNALKNE
Sbjct: 121 VVLGNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNE 180
Query: 181 PQEE 184
P+EE
Sbjct: 181 PEEE 184
>sp|P93267|RAB7_MESCR Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 207
Score = 345 bits (885), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/184 (87%), Positives = 176/184 (95%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MASRRR LLK+IILGDSGVGKTSLMNQ+VN+KFSNQYKATIGADFLTKE+QFEDRLFTLQ
Sbjct: 1 MASRRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVNVMKSF++LN WREEFLIQASP+DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
V+LGNK DVDGG+ RVVSEKKAKAWC SKGNIPYFETSAK+G NVE AF+CIAKNA++NE
Sbjct: 121 VLLGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNE 180
Query: 181 PQEE 184
P+EE
Sbjct: 181 PEEE 184
>sp|Q9LS94|RAG3F_ARATH Ras-related protein RABG3f OS=Arabidopsis thaliana GN=RABG3F PE=2
SV=1
Length = 206
Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/184 (90%), Positives = 174/184 (94%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSF+NLNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
V++GNK DVD GNSRVVSEKKAKAWCASKGNIPYFETSAK G NVE AF+CIAK+ALK+
Sbjct: 121 VLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSG 180
Query: 181 PQEE 184
+EE
Sbjct: 181 EEEE 184
>sp|P31022|RAB7_PEA Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1
Length = 206
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 164/184 (89%), Positives = 175/184 (95%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSFDNLNNWREEFLIQA+PSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VV+GNK D+DGGNSRVVSEKKA+AWCA+KGNIPYFETSAKEG NVE AF+ IAK+ALK+
Sbjct: 121 VVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSG 180
Query: 181 PQEE 184
+EE
Sbjct: 181 EEEE 184
>sp|Q9XI98|RAG3E_ARATH Ras-related protein RABG3e OS=Arabidopsis thaliana GN=RABG3E PE=2
SV=1
Length = 206
Score = 336 bits (862), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 161/184 (87%), Positives = 171/184 (92%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SRRR LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQFEDRLFTLQ
Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF++LNNWREEFLIQASPSDPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VV+GNK DVDGG+SRVVSEKKA+AWCASKGNIPY+ETSAK G NVE AF CI NA+K+
Sbjct: 121 VVIGNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSG 180
Query: 181 PQEE 184
+EE
Sbjct: 181 EEEE 184
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 318 bits (815), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 148/184 (80%), Positives = 166/184 (90%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+ RRR LLKVI+LGD+GVGKTSLMNQYV++KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVNVMKSFD L+NW EEFL QA+P DP +FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK D+DGGNSRVVSEKKAK WCASKGNIPYFETSAKE FNV+AAF CIAK AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANE 180
Query: 181 PQEE 184
+++
Sbjct: 181 HEQD 184
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 317 bits (812), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 148/184 (80%), Positives = 165/184 (89%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+ RRR LLKVI+LGDSGVGKTSLMNQYV++KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD L NW EEFL QA+P DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK D+DGGNSRVVSEKKAK WCA+KGNIPYFETSAKE +NV+AAF CIAK AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 181 PQEE 184
+++
Sbjct: 181 HEQD 184
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 304 bits (779), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 140/184 (76%), Positives = 165/184 (89%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++++R LLKVIILGDSGVGKTSLMNQYV +KF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCCVLV+DVN KSFD+L+NWR+EF+IQA P DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
+VLGNK D +GG+SR VSEKKAKAWCASKG+IPYFETSAKE NVEAAF CI +NAL+NE
Sbjct: 121 MVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 180
Query: 181 PQEE 184
+EE
Sbjct: 181 KEEE 184
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 304 bits (778), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 142/184 (77%), Positives = 161/184 (87%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA+RRR LLKVI+LGDSGVGKTSLMNQYV++KFS QYKATIGADF+TKE+Q ++L TLQ
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCC LVYDVNV++SFDNL W EEFL QASPSDP+ FPF
Sbjct: 61 IWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
+VLGNK DVDGG+SRVVS+KKA WCAS GNIPYFETSAK+ FNV+ AF IAK AL NE
Sbjct: 121 IVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANE 180
Query: 181 PQEE 184
+++
Sbjct: 181 HEQD 184
>sp|O04157|RAG3B_ARATH Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1
SV=1
Length = 203
Score = 300 bits (769), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 141/184 (76%), Positives = 160/184 (86%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++RRR LLKVIILGDSGVGKTSLMNQYVN KFS QYKATIGADF+TKE+Q +DRL TLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLVYDVN +KSF++L+NW EFL +ASP DP FPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
++LGNK D+DGGNSRVVSEKKA+ WCA KGNI YFETSAKE +NV+ +F CI K AL NE
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 181 PQEE 184
++
Sbjct: 181 RDQD 184
>sp|P36411|RAB7A_DICDI Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A
PE=1 SV=1
Length = 203
Score = 295 bits (756), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 138/180 (76%), Positives = 162/180 (90%), Gaps = 2/180 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA+++++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKE+ +DR+ T+Q
Sbjct: 1 MATKKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVL YDVNV K+F+NL++WR+EFLIQA P DP+NFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ N RVVS+K+A +WC SKGNIPYFETSAKE NVE AF+ IA+NA+K E
Sbjct: 121 VVLGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLE 178
>sp|P36864|YPTV5_VOLCA GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1
Length = 205
Score = 294 bits (753), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 163/184 (88%), Gaps = 1/184 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++++R +LK+IILGDSGVGKTSLMNQYV +KF+ +YKATIGADFLTKE++ +D+ T+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCC+LV+DVN KSFD+L+NWR+EF+IQA PSDP+NFPF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D G N R V+EKKAKAWCASKG+IPYFETSAKE NVEAAF CI +NAL+NE
Sbjct: 121 VVLGNKIDEVGVN-RQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 179
Query: 181 PQEE 184
+EE
Sbjct: 180 KEEE 183
>sp|Q5R9Y4|RAB7A_PONAB Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1
Length = 207
Score = 290 bits (741), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|P09527|RAB7A_RAT Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2
Length = 207
Score = 289 bits (740), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|P51150|RAB7A_MOUSE Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2
Length = 207
Score = 289 bits (740), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|P51149|RAB7A_HUMAN Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1
Length = 207
Score = 289 bits (740), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|P18067|RAB7A_CANFA Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1
Length = 207
Score = 289 bits (740), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|Q3T0F5|RAB7A_BOVIN Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1
Length = 207
Score = 287 bits (735), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 157/184 (85%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLGVAFYRGADCCVLV+DV +F L++WR+EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AWC SK NIPYFETSAKE NVE AF+ I +NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|Q9C2L8|RAB7_NEUCR Probable Ras-related protein Rab7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=17E5.300 PE=3 SV=1
Length = 205
Score = 286 bits (733), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 158/184 (85%), Gaps = 1/184 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M+SR+++LLKVIILGDSGVGKTSLMNQYVN+KFS YKATIGADFLT+EV +DR T+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN KSFD L++WR+EFLIQASP DP+NFPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ + RV+S K+A +C SKGNIPYFETSAKE NVE AFE IA+NAL E
Sbjct: 121 VVLGNKIDME-ESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQE 179
Query: 181 PQEE 184
EE
Sbjct: 180 ESEE 183
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 283 bits (723), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 155/184 (84%), Gaps = 3/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M SR+++LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEV +DRL T+Q
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSL VAFYRGADCCVLV+DV +F L++WR EFLIQASP DPENFPF
Sbjct: 61 IWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK D++ +R V+ K+A+AW SK NIPYFETSAKE NVE AF+ IA+NALK E
Sbjct: 121 VVLGNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 181 PQEE 184
+ E
Sbjct: 178 TEVE 181
>sp|Q9SJ11|RABG2_ARATH Ras-related protein RABG2 OS=Arabidopsis thaliana GN=RABG2 PE=1
SV=2
Length = 212
Score = 276 bits (707), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 150/180 (83%)
Query: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
+ R LLKVI+LGDSGVGKTSLMNQYV +KF+ QYKATIGADF+TKE+ +++ TLQIWD
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWD 64
Query: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
TAGQERFQSLG AFYRGADCCVLVYDVN +KSF+ LNNW EFL QA+P +PE FPFV++
Sbjct: 65 TAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLI 124
Query: 124 GNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQE 183
GNKTDVDGGNSRVVS K+A WC SKGNIPY ETSAKE N++ AF +A AL NE ++
Sbjct: 125 GNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNERKQ 184
>sp|O94655|YPT7_SCHPO GTP-binding protein ypt7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt7 PE=3 SV=1
Length = 205
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 129/179 (72%), Positives = 154/179 (86%), Gaps = 1/179 (0%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA +++ LLKVIILG+SGVGKTS+MNQYVNRKFS YKATIGADFLTKEV +D++ TLQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERFQSLGVAFYRGADCCVLVYDVN KSF+ L++WR+EFLIQASPS+PE FPF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKN 179
++LGNK DV+ R+VS+ KA A+C ++G IPYFETSAKE NV+ AFE +AK AL+N
Sbjct: 121 ILLGNKVDVE-EQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN 178
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 260 bits (665), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/184 (65%), Positives = 145/184 (78%), Gaps = 2/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MAS+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ KSFD+L++WR+EFL+Q P DPE+FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK +D R V E KA+ WC S GNI +FE SAK+ N+E AF+ IAK A E
Sbjct: 121 VVLGNK--LDKATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 PQEE 184
EE
Sbjct: 179 KDEE 182
>sp|Q6DUB4|RAB7B_PAROT Ras-related protein Rab-7b OS=Paramecium octaurelia GN=Rab7b PE=1
SV=1
Length = 206
Score = 259 bits (661), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 2/184 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MAS+++ L K+IILGDSGVGKTSLMNQYVN +F+ QY+AT+GADF+ KEV +DR+ TLQ
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDTAGQERFQSLG AFYRGADCCVLVYD+ KSFD+L++WR+EFL+Q P DPE+FPF
Sbjct: 61 IWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPF 120
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
VVLGNK +D R V E K++ WC S GNI +FE SAK+ N+E AF+ IAK A E
Sbjct: 121 VVLGNK--LDKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 181 PQEE 184
EE
Sbjct: 179 KDEE 182
>sp|P32939|YPT7_YEAST GTP-binding protein YPT7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT7 PE=1 SV=1
Length = 208
Score = 240 bits (613), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 147/186 (79%), Gaps = 2/186 (1%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
M+SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFP 119
Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV SF+N+ +WR+EFL+ A+ + PE FP
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 120 FVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKN 179
FV+LGNK D + + ++VSEK A+ S G+IP F TSAK NV+ AFE IA++AL+
Sbjct: 121 FVILGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 180 EPQEEE 185
+ E
Sbjct: 180 NQADTE 185
>sp|Q9HDY0|YPT71_SCHPO GTP-binding protein ypt71 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt71 PE=3 SV=1
Length = 208
Score = 226 bits (576), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 144/187 (77%), Gaps = 4/187 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M++++R+ LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERFQSLG+AFYRGADCCV+VY+VN KSFD++ NWR+EFL Q S D FPF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFPF 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASK--GNIPYFETSAKEGFNVEAAFECIAKNALK 178
+++GN+ D D R VS +A +C SK N+ +FE SAKE NV FE +++ AL+
Sbjct: 120 IIVGNQIDKDAS-KRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 179 NEPQEEE 185
NE ++
Sbjct: 179 NESSRDD 185
>sp|Q948K6|RABG1_ARATH Ras-related protein RABG1 OS=Arabidopsis thaliana GN=RABG1 PE=2
SV=1
Length = 204
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 129/174 (74%)
Query: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQE 68
LK+I+LGDSGVGKTSL+ +Y ++ F + +TI D +TKE+ +R LQIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 69 RFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTD 128
RF+SL FYR DCCVLVYDVN +K+F++++NW +EF+ QA+P P FPFV++GNKTD
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 129 VDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
V+ G RVV+++ A WC SKGNI YFETSAK NVE AF IAK AL NE Q
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQ 179
>sp|Q8BHH2|RAB9B_MOUSE Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1
Length = 201
Score = 203 bits (516), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 128/183 (69%), Gaps = 3/183 (1%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVV 121
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
LGNK D + R V+ ++A+AWC GN PY ETSAK+ NV AFE + L E Q
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EEE 185
E
Sbjct: 179 LEH 181
>sp|Q5R4W9|RAB9B_PONAB Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1
Length = 201
Score = 202 bits (515), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 128/183 (69%), Gaps = 3/183 (1%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPE+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
LGNK D + R V+ ++A+AWC G+ PY ETSAK+ NV AFE + L E Q
Sbjct: 122 LGNKVDKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EEE 185
E
Sbjct: 179 LEH 181
>sp|Q9R0M6|RAB9A_MOUSE Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1
Length = 201
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNKT
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEE 185
D+ R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + E
Sbjct: 127 DI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEH 181
>sp|Q9NP90|RAB9B_HUMAN Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1
Length = 201
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 127/183 (69%), Gaps = 3/183 (1%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
S + +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIW
Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPE+FPFVV
Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 182
LGNK D + R V+ ++A+ WC G+ PY ETSAK+ NV AFE + L E Q
Sbjct: 122 LGNKVDKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178
Query: 183 EEE 185
E
Sbjct: 179 LEH 181
>sp|Q99P75|RAB9A_RAT Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=1 SV=2
Length = 201
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNKT
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEE 185
D+ R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + +
Sbjct: 127 DI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDH 181
>sp|P24408|RAB9A_CANFA Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2
Length = 201
Score = 199 bits (507), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNK
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEE 185
D+ + R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + +
Sbjct: 127 DI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDH 181
>sp|P51151|RAB9A_HUMAN Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1
Length = 201
Score = 199 bits (507), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQ
Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +PE+FPFV+LGNK
Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEE 185
D+ + R VS ++A+AWC G+ PYFETSAK+ NV AAFE + L E + +
Sbjct: 127 DI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDH 181
>sp|Q08DE8|RAB7B_BOVIN Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1
Length = 200
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 117/177 (66%), Gaps = 5/177 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++ LK+II+G GVGKTSL+++YV++ F Y+ T+GA L+K + ED LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + + +P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
VVLGNK D++ R V ++ A+ WC K +IPYFE SAK NV AFE +A AL
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>sp|Q54K69|RAB7B_DICDI Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B
PE=3 SV=1
Length = 197
Score = 166 bits (420), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 124/185 (67%), Gaps = 11/185 (5%)
Query: 3 SRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIW 62
++ R ++KV+I+G+ VGKTS++ +YV+++F K TIG DF V + + TLQ+W
Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLW 56
Query: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVV 122
DT+GQERF+SL +++YRGAD C+LV+DV K+ +L WR++F+ + DP FPF++
Sbjct: 57 DTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFII 116
Query: 123 LGNKTDVDGGNSRVVSEKKAKAWCASK--GNIPYFETSAKEGFNVEAAFECIAKNALKNE 180
LGNK D +RVV+EK A WC GN+ YF+TSAK+ N+E F+ I+ N +N+
Sbjct: 117 LGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHIS-NQCENQ 172
Query: 181 PQEEE 185
PQ E
Sbjct: 173 PQSNE 177
>sp|Q8VEA8|RAB7B_MOUSE Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1
Length = 199
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++ LK+II+G GVGKTSL++QYV++ F +Y+ T+GA L+K + +D LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + +++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
VVLGNK D++ R VS++ WC K ++PYFE SAK NV AFE +A AL
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>sp|Q96AH8|RAB7B_HUMAN Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1
Length = 199
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
M R+++ LK+II+G GVGKTSL++QYV++ F +Y+ T+GA L+K + D LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
IWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + +++P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
V+LGNK D+ R V ++ A+ WC K +IPYFE SAK NV AFE +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 116/177 (65%), Gaps = 7/177 (3%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
MLLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAG
Sbjct: 32 MLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAG 91
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF+++ ++YRGA ++VYD+ M SF+++ W + ASPS + +++GNK
Sbjct: 92 QERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLK----LIVGNK 147
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQE 183
D++ + R V K AK + A + NIP ETSAKE ++ AF +A + K+ PQ+
Sbjct: 148 CDLN--SKRAVDFKIAKKF-ADELNIPIMETSAKESTAIDEAFIKLASDIKKSTPQK 201
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VER 116
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
++LGNK D++ +V+ E+ K A + I +FETSAK NV+ AF +A++ L
Sbjct: 117 LLLGNKCDME-AKRKVLKEQADK--LAREHGIRFFETSAKSSMNVDEAFNSLARDIL 170
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 8 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
L K++++GDSGVGK+++++++ FS K+TIG +F TK +Q E + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 68 ERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKT 127
ER++++ A+YRGA +LVYD+ +SFDN++ W E A S +++GNK+
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSS----IVIMMVGNKS 127
Query: 128 DVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 172
D+ + R VSE + KA A K + + ETSA E NVE AF+ I
Sbjct: 128 DLI--HLRAVSEDEGKA-LAEKEGLFFLETSAMEAVNVEEAFQTI 169
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 7/177 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VER 116
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
++LGNK D++ R V +++A G I +FETSAK NV+ AF +A++ L
Sbjct: 117 LLLGNKCDMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 170
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 7/177 (3%)
Query: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
MA L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VER 116
Query: 121 VVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNAL 177
++LGNK D++ R V +++A G I +FETSAK NV+ AF +A++ L
Sbjct: 117 LLLGNKCDMEA--KRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 170
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 7/178 (3%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAG
Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF ++ ++YRGA +LVYD+ KSF+N++ W A+ E+ ++LGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEE 184
D+D + RVV + K + G I +FETSAK N+E AF +A++ L+ P +E
Sbjct: 124 CDMD--DKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 7/178 (3%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAG
Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF ++ ++YRGA +LVYD+ KSF+N++ W A+ E+ ++LGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEE 184
D+D + RVV + K + G I +FETSAK N+E AF +A++ L+ P +E
Sbjct: 124 CDMD--DKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 7/178 (3%)
Query: 7 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 66
+L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + + LQIWDTAG
Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67
Query: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNK 126
QERF ++ ++YRGA +LVYD+ KSF+N++ W A+ E+ ++LGNK
Sbjct: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123
Query: 127 TDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEE 184
D+D + RVV + K + G I +FETSAK N+E AF +A++ L+ P +E
Sbjct: 124 CDMD--DKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,669,345
Number of Sequences: 539616
Number of extensions: 2600369
Number of successful extensions: 16494
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 630
Number of HSP's that attempted gapping in prelim test: 14093
Number of HSP's gapped (non-prelim): 1646
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)