Citrus Sinensis ID: 029931

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
Protein Sequence
MGRFSCETESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDEEESEELLKNENKKKKKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcHHccccccccccHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccccccccccccccccccccHHccccccccccccHHHHccHHHHHHHHHHHHHHHHEccccccccccccccHHHHHHHHHHHHccccccccccccHHcccHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mgrfsceteswvdsSEAIMEEEthdlnqepqfltitrsgfdeeeSEELLKNENKKKKKNQVLLEGYvetdseddlkrtksltdedlDELKgcldlgfgfsydeipELCNTLPALELCYSMSQKfmdehqsqkspeshgnspvstdpvsspianwkisspgdhpedVKARLKYWAQAVACTVRLCS
Flexible Loop (DISEMBL)
mgrfsceteswvdsSEAIMEEethdlnqepqFLTITRSGFDEEESEELlknenkkkkknqvllegyvetdseddlkrtksltdedldeLKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSqkspeshgnspvstdpvsspIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS
Low Complexity Region (SEG)
MGRFSCETESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDeeeseellknenkkkkknQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS
Disordered region (IsUnstruct)
**************************************************************************************DELKGCLDLGFGFSYDEIPELCNTLPALELCYSM**********************************************KARLKYWAQAVACTVRLC*
Disordered Region (DISOPRED)
*************************************************************************************LDELKGCLDLGFGFSYDEIPELCNTLPALELC*****************************************PG*HPEDVKARLKYWAQAVACTVRLC*
Disordered Region (DISEMBL)
**************SEAIMEEETHDLNQEPQFLTITRSG***********NENKKKKKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKF************************SPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS
Disordered Region (DISPRO)
************************************************************VLLEGYVETD*******TKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFM*************************IANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRFSCETESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDEEESEELLKNENKKKKKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVRLCS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
224093164	198	predicted protein [Populus trichocarpa]	0.978	0.914	0.628	6e-60
449468798	183	PREDICTED: uncharacterized protein LOC10	0.951	0.961	0.659	3e-57
359478112	185	PREDICTED: uncharacterized protein LOC10	0.918	0.918	0.63	3e-52
449446235	172	PREDICTED: uncharacterized protein LOC10	0.675	0.726	0.782	1e-51
297848860	187	hypothetical protein ARALYDRAFT_470598 [	0.972	0.962	0.593	8e-51
42561736	189	uncharacterized protein [Arabidopsis tha	0.967	0.947	0.569	3e-50
224133092	151	predicted protein [Populus trichocarpa]	0.697	0.854	0.787	4e-50
147841714	295	hypothetical protein VITISV_034776 [Viti	0.891	0.559	0.620	9e-49
30684991	202	uncharacterized protein [Arabidopsis tha	0.686	0.628	0.757	2e-48
255577745	228	conserved hypothetical protein [Ricinus	0.881	0.714	0.587	5e-47

>gi|224093164|ref|XP_002309816.1| predicted protein [Populus trichocarpa] gi|222852719|gb|EEE90266.1| predicted protein [Populus trichocarpa]

 Score =  235 bits (599), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 127/202 (62%), Positives = 145/202 (71%), Gaps = 21/202 (10%)

Query: 1   MGRFSCETESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDEEESEELLKNENK------ 54
           MG  SCE ESWV SS  +  +E  + +Q      +     + E+  + +   N       
Sbjct: 1   MGAISCERESWVSSSNLVEVKENQENDQTHNVDFLADDVLETEQVWQYMHQNNTFTKSIN 60

Query: 55  -------KKKKNQVLLEGYVE---TDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEI 104
                  ++KK+QVLLEGYVE   + SED+LKRTKSLTD+DLDELKGCLDLGFGFSYDEI
Sbjct: 61  KGSLQKIQRKKSQVLLEGYVEGSSSGSEDELKRTKSLTDDDLDELKGCLDLGFGFSYDEI 120

Query: 105 PELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPV-SSPIANWKISSPGDHP 163
           PELCNTLPALELCYSMSQKF+DEH  QKSPE  G+SP   +   SSPIANWKISSPGDHP
Sbjct: 121 PELCNTLPALELCYSMSQKFLDEH--QKSPE--GSSPAVAEAANSSPIANWKISSPGDHP 176

Query: 164 EDVKARLKYWAQAVACTVRLCS 185
           EDVKARLKYWAQAVACTVRLCS
Sbjct: 177 EDVKARLKYWAQAVACTVRLCS 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468798|ref|XP_004152108.1| PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus] gi|449484637|ref|XP_004156937.1| PREDICTED: uncharacterized LOC101213317 [Cucumis sativus]

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 122/185 (65%), Positives = 140/185 (75%), Gaps = 9/185 (4%)

Query: 4   FSCETESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDEEESEELLKNENKKKKKNQVLL 63
           F  E+++WV S   I E+   + + +      T S FDE  S ++   +   KK++QVLL
Sbjct: 5   FFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDE--SAQMGVKKRMMKKRSQVLL 62

Query: 64  EGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQK 123
           EG+VE   EDDL RTKSLTDEDLDELKGC+DLGFGFSYDEIPELCNTLPALELCYSMSQK
Sbjct: 63  EGFVE--DEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120

Query: 124 FMDEHQSQKSPESHGNSPVSTD---PVSSPIANWKISSPGDHPEDVKARLKYWAQAVACT 180
           +MD+H  QKSPES   S V  D    VSSPIANWKISSPGDHPEDVKARLK+WAQAVACT
Sbjct: 121 YMDDH--QKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACT 178

Query: 181 VRLCS 185
           VRLC+
Sbjct: 179 VRLCN 183

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478112|ref|XP_002264307.2| PREDICTED: uncharacterized protein LOC100261066 isoform 1 [Vitis vinifera] gi|359478114|ref|XP_003632071.1| PREDICTED: uncharacterized protein LOC100261066 isoform 2 [Vitis vinifera]

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/200 (63%), Positives = 139/200 (69%), Gaps = 30/200 (15%)

Query: 1   MGRFSCETESWVDSSEAIMEE---------------ETHDLNQEPQFLTITRSGFDEEES 45
           MGR S ETE  V  S   +E                E  +  Q P  L+ T SG      
Sbjct: 1   MGRLSSETEPMVSPSVFTIETADPDAKTLEKRLETLEIEEQGQWPCGLSTTNSGS----- 55

Query: 46  EELLKNENKKKKKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIP 105
               K + K+KKK QVLLEGYVET  EDDL RTKSLTDEDLDELKGCLDLGFGFSY+EIP
Sbjct: 56  ----KKKKKQKKKKQVLLEGYVETADEDDLMRTKSLTDEDLDELKGCLDLGFGFSYEEIP 111

Query: 106 ELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPED 165
           ELCNTLPALELCYSMSQKFMD+   QK+PES   SP +++    PIANWKISSPGDHPE+
Sbjct: 112 ELCNTLPALELCYSMSQKFMDDQ--QKAPES---SPAASE-SPGPIANWKISSPGDHPEE 165

Query: 166 VKARLKYWAQAVACTVRLCS 185
           VKARLK+WAQAVACTVRLCS
Sbjct: 166 VKARLKFWAQAVACTVRLCS 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446235|ref|XP_004140877.1| PREDICTED: uncharacterized protein LOC101222799 [Cucumis sativus] gi|449518781|ref|XP_004166414.1| PREDICTED: uncharacterized LOC101222799 [Cucumis sativus]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/129 (78%), Positives = 111/129 (86%), Gaps = 4/129 (3%)

Query: 57  KKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALEL 116
           KKNQ+LLEG+VE   ED+L RTKSLTD+DL++LKGC+DLGF F YDEIPELCNTLPALEL
Sbjct: 48  KKNQILLEGFVEASDEDNLTRTKSLTDDDLEDLKGCVDLGFAFCYDEIPELCNTLPALEL 107

Query: 117 CYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQA 176
           CYSM+QKFMDEH  QK PE+    P S D VS PI NWKISSPGDHPEDVKARLKYWAQA
Sbjct: 108 CYSMNQKFMDEH--QKVPENP--LPESMDSVSGPIPNWKISSPGDHPEDVKARLKYWAQA 163

Query: 177 VACTVRLCS 185
           VACTVRLC+
Sbjct: 164 VACTVRLCN 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848860|ref|XP_002892311.1| hypothetical protein ARALYDRAFT_470598 [Arabidopsis lyrata subsp. lyrata] gi|297338153|gb|EFH68570.1| hypothetical protein ARALYDRAFT_470598 [Arabidopsis lyrata subsp. lyrata]

 Score =  205 bits (521), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/192 (59%), Positives = 138/192 (71%), Gaps = 12/192 (6%)

Query: 1   MGRFSCETESWVDSSEAIMEEETHDLNQEPQFLTIT-RSGFDEEESEELLKNENKKKKKN 59
           MG   C++     +S + +EE   +      ++ I+ R  F   E     K E   +KK+
Sbjct: 1   MGCARCKSSDPWQTSASALEEYVDESGINEAWVEISHRGSFVSGEGSSRKKLE---RKKS 57

Query: 60  QVLLEGYVET----DSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALE 115
           QVLLEGYVET    D +DDL R+KSLTD+DL++LKGCLDLGFGFSYDEIPELCNTLPALE
Sbjct: 58  QVLLEGYVETAAVDDQKDDLTRSKSLTDDDLEDLKGCLDLGFGFSYDEIPELCNTLPALE 117

Query: 116 LCYSMSQKFMDEHQSQKSPESHG--NSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYW 173
           LCYSMSQKF+D+    KSPES    +SP  +   S+PIANWKISSPGD+P+DVKARLKYW
Sbjct: 118 LCYSMSQKFLDDK--HKSPESSSVEDSPSPSPVTSTPIANWKISSPGDNPDDVKARLKYW 175

Query: 174 AQAVACTVRLCS 185
           AQAVACTV+LCS
Sbjct: 176 AQAVACTVQLCS 187

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42561736|ref|NP_172078.2| uncharacterized protein [Arabidopsis thaliana] gi|42571351|ref|NP_973766.1| uncharacterized protein [Arabidopsis thaliana] gi|334182323|ref|NP_001184917.1| uncharacterized protein [Arabidopsis thaliana] gi|334182325|ref|NP_001184918.1| uncharacterized protein [Arabidopsis thaliana] gi|6850316|gb|AAF29393.1|AC009999_13 Contains similarity to an unknown protein from Arabidopsis thaliana gb|AC002335.2. ESTs gb|AI997584, gb|AA712406 come from this gene [Arabidopsis thaliana] gi|107738111|gb|ABF83638.1| At1g05870 [Arabidopsis thaliana] gi|332189785|gb|AEE27906.1| uncharacterized protein [Arabidopsis thaliana] gi|332189786|gb|AEE27907.1| uncharacterized protein [Arabidopsis thaliana] gi|332189787|gb|AEE27908.1| uncharacterized protein [Arabidopsis thaliana] gi|332189788|gb|AEE27909.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/195 (56%), Positives = 141/195 (72%), Gaps = 16/195 (8%)

Query: 1   MGRFSCET-ESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDEEESEELLKNENKKKKKN 59
           MG   C++ + W  S+ A    +   +N+    ++  RS    E S + L+     +KK+
Sbjct: 1   MGCVRCKSSDPWQTSANAFESVDESGINEAWVEISSRRSFVAGEGSRKKLE-----RKKS 55

Query: 60  QVLLEGYVET-------DSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLP 112
           QVLLEGYVET       D +DDL R+KSLTD+DL++L+GCLDLGFGFSYDEIPELCNTLP
Sbjct: 56  QVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEIPELCNTLP 115

Query: 113 ALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPV--SSPIANWKISSPGDHPEDVKARL 170
           ALELCYSMSQKF+D+ Q+ KSPE+       + P+  ++PIANWKISSPGD+P+DVKARL
Sbjct: 116 ALELCYSMSQKFLDDKQN-KSPETSSVEDCPSPPLVTATPIANWKISSPGDNPDDVKARL 174

Query: 171 KYWAQAVACTVRLCS 185
           KYWAQAVACTV+LCS
Sbjct: 175 KYWAQAVACTVQLCS 189

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133092|ref|XP_002327959.1| predicted protein [Populus trichocarpa] gi|222837368|gb|EEE75747.1| predicted protein [Populus trichocarpa]

 Score =  202 bits (515), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 114/132 (86%), Gaps = 3/132 (2%)

Query: 56  KKKNQVLLEGYVE--TDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPA 113
           +KK+QVLLEGYVE  ++SED+LKRTKSLTD+DLDELKGCLDLGFGFSYDEIPELCNTLPA
Sbjct: 21  RKKSQVLLEGYVEGRSNSEDELKRTKSLTDDDLDELKGCLDLGFGFSYDEIPELCNTLPA 80

Query: 114 LELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYW 173
           LELCYSMSQKF+DEHQ +    S      +    SSPIANWKISSPGDHPEDVKARLK+W
Sbjct: 81  LELCYSMSQKFLDEHQ-KPPESSSPAEAEAEAASSSPIANWKISSPGDHPEDVKARLKFW 139

Query: 174 AQAVACTVRLCS 185
           AQ VACTVRLCS
Sbjct: 140 AQTVACTVRLCS 151

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841714|emb|CAN60580.1| hypothetical protein VITISV_034776 [Vitis vinifera]

 Score =  198 bits (503), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/195 (62%), Positives = 134/195 (68%), Gaps = 30/195 (15%)

Query: 1   MGRFSCETESWVDSSEAIMEE---------------ETHDLNQEPQFLTITRSGFDEEES 45
           MGR S ETE  V  S   +E                E  +  Q P  L+ T SG      
Sbjct: 1   MGRLSSETEPMVSPSVFTIETADPDAKTLEKRLXTLEIEEQGQWPCGLSTTNSGS----- 55

Query: 46  EELLKNENKKKKKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIP 105
               K + K+KKK QVLLEGYVET  EDDL RTKSLTDEDLDELKGCLDLGFGFSY+EIP
Sbjct: 56  ----KKKKKQKKKKQVLLEGYVETADEDDLMRTKSLTDEDLDELKGCLDLGFGFSYEEIP 111

Query: 106 ELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPED 165
           ELCNTLPALELCYSMSQKFMD+   QK+PES   SP +++    PIANWKISSPGDHPE+
Sbjct: 112 ELCNTLPALELCYSMSQKFMDDQ--QKAPES---SPAASES-PGPIANWKISSPGDHPEE 165

Query: 166 VKARLKYWAQAVACT 180
           VKARLK+WAQAVACT
Sbjct: 166 VKARLKFWAQAVACT 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684991|ref|NP_850169.1| uncharacterized protein [Arabidopsis thaliana] gi|42571003|ref|NP_973575.1| uncharacterized protein [Arabidopsis thaliana] gi|17528942|gb|AAL38681.1| unknown protein [Arabidopsis thaliana] gi|50897252|gb|AAT85765.1| At2g31560 [Arabidopsis thaliana] gi|222423288|dbj|BAH19620.1| AT2G31560 [Arabidopsis thaliana] gi|222423386|dbj|BAH19665.1| AT2G31560 [Arabidopsis thaliana] gi|330253466|gb|AEC08560.1| uncharacterized protein [Arabidopsis thaliana] gi|330253467|gb|AEC08561.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 110/132 (83%), Gaps = 5/132 (3%)

Query: 56  KKKNQVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALE 115
           KKK+QVLLEGY   D +DDL R KSLTD+DL+ELKGCLDLGFGFSYDEIPELCNTLPALE
Sbjct: 74  KKKSQVLLEGYA-LDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALE 132

Query: 116 LCYSMSQKFMDEHQS--QKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYW 173
           LCYSMSQKF+D+ Q    KS E   +SP  T   ++PIANWKISSPGD P+DVKARLKYW
Sbjct: 133 LCYSMSQKFLDDKQQNHHKSQEEDDSSPPPT--TTAPIANWKISSPGDDPDDVKARLKYW 190

Query: 174 AQAVACTVRLCS 185
           AQ VACTVRLCS
Sbjct: 191 AQTVACTVRLCS 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577745|ref|XP_002529747.1| conserved hypothetical protein [Ricinus communis] gi|223530745|gb|EEF32613.1| conserved hypothetical protein [Ricinus communis]

 Score =  192 bits (488), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 122/194 (62%), Gaps = 31/194 (15%)

Query: 1   MGRFSCETESWVDSSEAIMEEETHDLNQEPQFLTITRSGFDEEESEELLK---------- 50
           M   SCE ESWV S    ++ +T    Q    L      FD+E  E   K          
Sbjct: 1   MAGISCEQESWVSSRNLNLDPKTQTHAQATS-LDQEHVSFDQETEEIWQKVNQSITTATT 59

Query: 51  -----------NENKKKKKNQVLLEGYVETDS---EDDLKRTKSLTDEDLDELKGCLDLG 96
                        N KKKKNQVLLEGYVE  S   EDDLKRTKSLTD+DLDELKGCLDLG
Sbjct: 60  NTLNNTFNSNSRSNSKKKKNQVLLEGYVEVASNNEEDDLKRTKSLTDDDLDELKGCLDLG 119

Query: 97  FGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKI 156
           FGFSYDEIPELCNTLPALELCYSMSQKF+DE    KSPE       S +P SSPIANWKI
Sbjct: 120 FGFSYDEIPELCNTLPALELCYSMSQKFLDEQ--HKSPERS----TSPEPASSPIANWKI 173

Query: 157 SSPGDHPEDVKARL 170
           SSPGDHPEDVK +L
Sbjct: 174 SSPGDHPEDVKVQL 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
TAIR|locus:2198708	189	AT1G05870 "AT1G05870" [Arabido	0.675	0.661	0.718	2e-47
TAIR|locus:2065913	202	AT2G31560 "AT2G31560" [Arabido	0.664	0.608	0.757	2e-47
TAIR|locus:2058213	189	AT2G43340 "AT2G43340" [Arabido	0.654	0.640	0.753	2.3e-46
TAIR|locus:2084973	191	AT3G04700 "AT3G04700" [Arabido	0.6	0.581	0.396	3.6e-18
TAIR|locus:2148835	192	AT5G28690 "AT5G28690" [Arabido	0.594	0.572	0.432	4.6e-18
TAIR|locus:2025530	190	AT1G08790 "AT1G08790" [Arabido	0.545	0.531	0.425	2e-17
TAIR|locus:505006554	154	AT4G33985 "AT4G33985" [Arabido	0.551	0.662	0.432	2.9e-16
TAIR|locus:2053603	155	AT2G15590 "AT2G15590" [Arabido	0.556	0.664	0.353	3.1e-12
TAIR|locus:2041414	252	AT2G46940 "AT2G46940" [Arabido	0.221	0.162	0.634	5e-12
TAIR|locus:2074875	181	AT3G50350 "AT3G50350" [Arabido	0.389	0.397	0.472	2.8e-11

TAIR|locus:2198708 AT1G05870 "AT1G05870" [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 97/135 (71%), Positives = 114/135 (84%)

Query:    60 QVLLEGYVET-------DSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLP 112
             QVLLEGYVET       D +DDL R+KSLTD+DL++L+GCLDLGFGFSYDEIPELCNTLP
Sbjct:    56 QVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEIPELCNTLP 115

Query:   113 ALELCYSMSQKFMDEHQSQKSPESHGNSPVSTDPV--SSPIANWKISSPGDHPEDVKARL 170
             ALELCYSMSQKF+D+ Q+ KSPE+       + P+  ++PIANWKISSPGD+P+DVKARL
Sbjct:   116 ALELCYSMSQKFLDDKQN-KSPETSSVEDCPSPPLVTATPIANWKISSPGDNPDDVKARL 174

Query:   171 KYWAQAVACTVRLCS 185
             KYWAQAVACTV+LCS
Sbjct:   175 KYWAQAVACTVQLCS 189

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2065913 AT2G31560 "AT2G31560" [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 97/128 (75%), Positives = 106/128 (82%)

Query:    60 QVLLEGYVETDSEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYS 119
             QVLLEGY   D +DDL R KSLTD+DL+ELKGCLDLGFGFSYDEIPELCNTLPALELCYS
Sbjct:    78 QVLLEGYA-LDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYS 136

Query:   120 MSQKFMDEHQSQ--KSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAV 177
             MSQKF+D+ Q    KS E   +SP  T   ++PIANWKISSPGD P+DVKARLKYWAQ V
Sbjct:   137 MSQKFLDDKQQNHHKSQEEDDSSPPPT--TTAPIANWKISSPGDDPDDVKARLKYWAQTV 194

Query:   178 ACTVRLCS 185
             ACTVRLCS
Sbjct:   195 ACTVRLCS 202

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2058213 AT2G43340 "AT2G43340" [Arabidopsis thaliana (taxid:3702)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 98/130 (75%), Positives = 110/130 (84%)

Query:    61 VLLEGYVETDS--EDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCY 118
             VLLEGYV  DS   DDLKRTKSLTD+DL+ELKGC+DLGFGF+Y+EIPELCNTLPALELCY
Sbjct:    64 VLLEGYV-VDSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNTLPALELCY 122

Query:   119 SMSQKFMDE---HQSQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQ 175
             SMSQKF+D+   H S  SPE    S V   PVS PIA+WKISSPGD+P+DVKARLK+WAQ
Sbjct:   123 SMSQKFIDQDHHHHSSSSPEK--KSSVLDSPVS-PIASWKISSPGDNPDDVKARLKFWAQ 179

Query:   176 AVACTVRLCS 185
             AVACTVRLC+
Sbjct:   180 AVACTVRLCT 189

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2084973 AT3G04700 "AT3G04700" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 46/116 (39%), Positives = 75/116 (64%)

Query:    71 SEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKF--MDEH 128
             + D+L    +LTDEDL+ELKG ++LGFGF+ +   +LCNTLPAL+L ++++++   +   
Sbjct:    72 ASDNLCIQANLTDEDLNELKGSIELGFGFNEEAGQKLCNTLPALDLYFAVNRQLSPLPSP 131

Query:   129 QSQKSPESHGNS---PVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTV 181
              S +S  +  ++    +   P  +   + KI  PGD P+ +K RL++WAQAVAC+V
Sbjct:   132 SSSRSSSASASTFSYSIPCSPKKTDSDSVKILCPGDDPQQMKQRLRHWAQAVACSV 187

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

TAIR|locus:2148835 AT5G28690 "AT5G28690" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 51/118 (43%), Positives = 73/118 (61%)

Query:    71 SEDDLKRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQS 130
             SE+D   +  LTDEDL ELKG ++LGFGFS +   +LCNTLPAL+L ++++++       
Sbjct:    72 SEND-NDSPDLTDEDLRELKGSIELGFGFSEEAGQKLCNTLPALDLYFAVNRQLSPLPSP 130

Query:   131 QKSPESHGN-SPVSTDPVSSPIA------NWKISSPGDHPEDVKARLKYWAQAVACTV 181
               S    G+ S  S    S P +      + KI  PGD+P+ VK RL++WAQAVAC++
Sbjct:   131 SSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKILCPGDNPQQVKQRLRHWAQAVACSL 188

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2025530 AT1G08790 "AT1G08790" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 46/108 (42%), Positives = 67/108 (62%)

Query:    81 LTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNS 140
             LTDEDL ELKG ++LGFGF+ ++   L  TLPAL+L ++++++            S  + 
Sbjct:    78 LTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALDLYFAVTRQISPVSTPGSGGSSSSSR 137

Query:   141 PVS----TDPVSSPIAN---WKISSPGDHPEDVKARLKYWAQAVACTV 181
             P S    +    SPI++    K+ SPGD P+ VK RL++WAQAVAC+V
Sbjct:   138 PTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKTRLRHWAQAVACSV 185

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006554 AT4G33985 "AT4G33985" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 48/111 (43%), Positives = 71/111 (63%)

Query:    75 LKRTKSLTDEDLDELKGCLDLGFGF---SYDEIPELCNTLPALELCYSMSQKFMDEHQSQ 131
             L R+KS+TDEDL+ELKGC++LGFGF   S D  P L  TLPAL L  ++++++     S 
Sbjct:    43 LGRSKSVTDEDLEELKGCIELGFGFEPDSPDLDPRLSETLPALGLYCAVNKQY-----SS 97

Query:   132 KSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVR 182
             +   +   S ++++  +S  ++  I   GD PE +K RLK WAQ VAC+V+
Sbjct:    98 RLSRTSSLSSIASEGENSN-SSTTIVDQGDDPETMKLRLKQWAQVVACSVK 147

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2053603 AT2G15590 "AT2G15590" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 40/113 (35%), Positives = 70/113 (61%)

Query:    73 DDLKRTKSLTDEDLDELKGCLDLGFGF---SYDEIPELCNTLPALELCYSMSQKFMDEHQ 129
             D L R+KS+T++D++ELKGC +LGFGF   S D  P L +T+PAL+L  ++ +++ + H 
Sbjct:    38 DLLPRSKSVTNDDIEELKGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSN-HL 96

Query:   130 SQKSPESHGNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTVR 182
             S+ S  +  +   +++ +++      I   GD  + +K +LK WA+ V  +VR
Sbjct:    97 SRTSSFASDHEVSNSNNITT------IVDKGDDRKTMKQKLKQWAKVVGFSVR 143

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2041414 AT2G46940 "AT2G46940" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
 Identities = 26/41 (63%), Positives = 34/41 (82%)

Query:   138 GNSPVSTDPVSSPIANWKISSPGDHPEDVKARLKYWAQAVA 178
             G++  ++   +SPIANW+ISSPGD P++VKARLK WAQAVA
Sbjct:   206 GSNRETSSGGNSPIANWRISSPGDDPKEVKARLKMWAQAVA 246

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2074875 AT3G50350 "AT3G50350" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 35/74 (47%), Positives = 45/74 (60%)

Query:    75 LKRTKSLTDEDLDELKGCLDLGFGFSYDEI--PELCNTLPALELCYSMSQKFMDEHQSQK 132
             L+R KSLTDEDLDELK   +LGFGF   E   P L NTLPALEL +++ + + D   ++ 
Sbjct:    67 LRRGKSLTDEDLDELKASFELGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKS 126

Query:   133 SPESHGNSPVSTDP 146
             +  S   S   T P
Sbjct:   127 TTSSSSLSDGDTSP 140

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	185
pfam07939	63	pfam07939, DUF1685, Protein of unknown function (D	9e-26

>gnl|CDD|191899 pfam07939, DUF1685, Protein of unknown function (DUF1685)

 Score = 93.5 bits (233), Expect = 9e-26
 Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 4/66 (6%)

Query: 81  LTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKFMDEHQSQKSPESHGNS 140
           LTD+DL+ELKGC DLGFGF  ++ P LCNTLPAL+L +++S++F+D   S+KSP S   S
Sbjct: 1   LTDDDLEELKGCFDLGFGFDEEDGPRLCNTLPALDLYFAVSRQFLD-DLSRKSPSS---S 56

Query: 141 PVSTDP 146
           P S   
Sbjct: 57  PSSVCS 62

The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	185
PF07939	64	DUF1685: Protein of unknown function (DUF1685); In	99.91

>PF07939 DUF1685: Protein of unknown function (DUF1685); InterPro: IPR012881 The members of this family are hypothetical eukaryotic proteins of unknown function

Probab=99.91  E-value=1.1e-25  Score=160.89  Aligned_cols=49  Identities=59%  Similarity=1.211  Sum_probs=45.3

Q ss_pred             CChhhhhhhhhchhcCCCCCCCCc-hhhhccchhhhhhhhhccccccccc
Q 029931           81 LTDEDLDELKGCLDLGFGFSYDEI-PELCNTLPALELCYSMSQKFMDEHQ  129 (185)
Q Consensus        81 LTDlDLEELKGc~DLGFgFs~E~~-PrL~~tLPaL~l~yav~~~~~d~~~  129 (185)
                      |||+|||||||||||||||++++. |+||+|||||++|||||+++.+.+.
T Consensus         1 lTd~dldELkGc~dLGFgF~~~~~~p~L~~tlPaL~lyyavn~q~~~~~~   50 (64)
T PF07939_consen    1 LTDDDLDELKGCIDLGFGFDEEDLDPRLCDTLPALELYYAVNRQYSDHKS   50 (64)
T ss_pred             CcHhHHHHHhhhhhhccccCccccChHHHhhhHHHHHHHHHHHHhccccC
Confidence            799999999999999999988774 9999999999999999999987653

The region in question is approximately 100 amino acid residues long.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	185
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.1 bits (90), Expect = 5e-04
 Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 31/155 (20%)

Query: 12  VDSSEAIMEEETHDLNQ--EPQFLTITRSGFDEEESEELLKNENKKKKKNQVLLEGYVET 69
           +D      + +  D+    E  F+      FD ++ +++ K+   K++ + +++      
Sbjct: 7   MDFETGEHQYQYKDILSVFEDAFV----DNFDCKDVQDMPKSILSKEEIDHIIMSK---- 58

Query: 70  DSEDDLKRTKSLTDEDLDE--------LKGCLDLGFGFSYDEIPELCNTLPALELCYSMS 121
              D +  T  L    L +        ++  L + + F    I       P++       
Sbjct: 59  ---DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ-PSMM------ 108

Query: 122 QKFMDEHQSQKSPESHGNSPVSTDPVSSPIANWKI 156
                 +  Q+    + N   +   VS      K+
Sbjct: 109 ---TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00