Query 029935
Match_columns 185
No_of_seqs 232 out of 1185
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:14:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e7a_A PP-1A, serine/threonine 100.0 4.8E-45 1.6E-49 298.9 21.9 179 6-185 7-193 (299)
2 2ie4_C PP2A-alpha;, serine/thr 100.0 1E-44 3.5E-49 299.0 21.7 183 3-185 6-188 (309)
3 3ll8_A Serine/threonine-protei 100.0 2.9E-44 1E-48 299.5 21.9 179 6-185 29-207 (357)
4 1fjm_A Protein serine/threonin 100.0 3E-43 1E-47 292.2 22.4 179 6-185 8-194 (330)
5 3h63_A Serine/threonine-protei 100.0 5E-43 1.7E-47 288.7 23.2 183 2-185 11-199 (315)
6 3icf_A PPT, serine/threonine-p 100.0 4.5E-43 1.5E-47 291.0 22.1 182 3-185 13-203 (335)
7 1aui_A Calcineurin, serine/thr 100.0 1.1E-42 3.8E-47 300.4 22.4 180 5-185 41-220 (521)
8 1wao_1 Serine/threonine protei 100.0 1.7E-37 5.9E-42 269.1 22.8 182 3-185 165-352 (477)
9 2z72_A Protein-tyrosine-phosph 100.0 3.5E-29 1.2E-33 209.2 7.9 147 36-183 60-230 (342)
10 2dfj_A Diadenosinetetraphospha 100.0 4.1E-29 1.4E-33 203.6 7.9 132 47-183 1-138 (280)
11 2qjc_A Diadenosine tetraphosph 99.9 9.8E-26 3.3E-30 181.9 9.0 134 34-173 6-150 (262)
12 1g5b_A Serine/threonine protei 99.9 9.4E-23 3.2E-27 159.9 7.8 121 44-170 10-145 (221)
13 3rqz_A Metallophosphoesterase; 99.8 2.4E-19 8.1E-24 142.7 7.2 118 45-170 2-123 (246)
14 1nnw_A Hypothetical protein; s 99.8 1E-18 3.5E-23 138.8 10.8 119 47-167 2-141 (252)
15 3qfm_A SAPH, putative uncharac 99.8 2.9E-19 1E-23 144.5 6.4 119 46-169 11-141 (270)
16 1su1_A Hypothetical protein YF 99.5 6.8E-14 2.3E-18 108.7 7.9 69 47-119 26-102 (208)
17 2kkn_A Uncharacterized protein 99.3 5.6E-13 1.9E-17 101.3 3.5 86 47-168 23-113 (178)
18 1uf3_A Hypothetical protein TT 99.3 3.4E-12 1.1E-16 98.7 6.8 74 46-120 5-78 (228)
19 2a22_A Vacuolar protein sortin 99.2 3.8E-12 1.3E-16 99.2 4.3 102 38-168 17-124 (215)
20 1s3l_A Hypothetical protein MJ 99.2 8.8E-12 3E-16 95.5 4.4 65 47-120 26-90 (190)
21 1z2w_A Vacuolar protein sortin 99.2 3.8E-11 1.3E-15 91.8 7.0 64 47-119 11-77 (192)
22 2yvt_A Hypothetical protein AQ 99.2 1.6E-11 5.3E-16 97.2 4.6 74 46-120 5-104 (260)
23 3ck2_A Conserved uncharacteriz 99.1 2.5E-11 8.4E-16 91.5 3.4 58 47-118 7-64 (176)
24 1xm7_A Hypothetical protein AQ 99.0 1.8E-10 6E-15 88.1 5.5 70 46-119 1-85 (195)
25 3d03_A Phosphohydrolase; glyce 98.9 4.4E-09 1.5E-13 83.3 8.1 71 47-119 1-85 (274)
26 3ib7_A ICC protein; metallopho 98.9 2.5E-09 8.6E-14 87.0 6.2 75 44-118 23-113 (330)
27 2q8u_A Exonuclease, putative; 98.8 5.1E-09 1.7E-13 86.3 6.5 73 45-119 17-110 (336)
28 3av0_A DNA double-strand break 98.8 8.8E-09 3E-13 86.7 7.0 74 45-119 19-109 (386)
29 1ii7_A MRE11 nuclease; RAD50, 98.7 1.8E-08 6.1E-13 83.1 7.5 71 47-118 1-88 (333)
30 3rl5_A Metallophosphoesterase 98.7 7.9E-09 2.7E-13 84.3 5.2 64 46-119 59-124 (296)
31 2nxf_A Putative dimetal phosph 98.7 5.6E-09 1.9E-13 84.1 3.6 73 46-118 5-100 (322)
32 2xmo_A LMO2642 protein; phosph 98.5 8.4E-08 2.9E-12 81.6 6.1 73 45-118 38-138 (443)
33 3tho_B Exonuclease, putative; 98.5 8.6E-08 2.9E-12 80.6 4.5 70 47-118 1-91 (379)
34 3t1i_A Double-strand break rep 98.4 4.8E-07 1.6E-11 77.3 6.0 56 45-100 31-98 (431)
35 4fbk_A DNA repair and telomere 98.3 7.9E-07 2.7E-11 76.6 6.8 54 46-99 76-141 (472)
36 4fbw_A DNA repair protein RAD3 98.3 7.1E-07 2.4E-11 76.0 6.2 55 45-99 12-78 (417)
37 2qfp_A Purple acid phosphatase 97.9 1.2E-05 4.1E-10 68.1 5.6 70 46-118 119-197 (424)
38 1ute_A Protein (II purple acid 97.9 2E-06 6.9E-11 68.8 0.7 73 46-118 6-95 (313)
39 1xzw_A Purple acid phosphatase 97.8 2.4E-05 8.3E-10 66.2 5.2 71 46-119 126-205 (426)
40 3tgh_A Glideosome-associated p 97.3 3.3E-05 1.1E-09 64.0 0.2 72 47-118 4-86 (342)
41 1hp1_A 5'-nucleotidase; metall 97.1 0.00018 6.1E-09 62.5 2.6 68 46-118 8-95 (516)
42 3qfk_A Uncharacterized protein 97.1 0.00028 9.7E-09 61.5 3.2 68 45-117 18-112 (527)
43 1t71_A Phosphatase, conserved 97.0 0.0004 1.4E-08 56.0 3.3 69 45-118 3-75 (281)
44 2z1a_A 5'-nucleotidase; metal- 96.8 0.00079 2.7E-08 59.0 4.3 68 46-118 29-119 (552)
45 4h2g_A 5'-nucleotidase; dimer, 96.6 0.0016 5.3E-08 57.1 4.5 68 46-118 25-118 (546)
46 2z06_A Putative uncharacterize 96.6 0.0024 8.3E-08 50.6 5.0 66 47-118 1-69 (252)
47 3ztv_A NAD nucleotidase, NADN; 96.5 0.0023 7.9E-08 56.4 4.7 68 46-118 12-106 (579)
48 3ive_A Nucleotidase; structura 96.4 0.001 3.5E-08 57.7 2.0 66 47-117 7-96 (509)
49 1t70_A Phosphatase; crystal, X 96.4 0.0046 1.6E-07 49.1 5.3 66 47-118 1-69 (255)
50 3jyf_A 2',3'-cyclic nucleotide 95.9 0.0033 1.1E-07 51.9 2.3 67 47-118 9-105 (339)
51 3gve_A YFKN protein; alpha-bet 95.8 0.0039 1.3E-07 51.5 2.5 68 46-118 11-112 (341)
52 3c9f_A 5'-nucleotidase; 2',3'- 95.6 0.0042 1.4E-07 54.6 2.2 70 44-118 13-107 (557)
53 4h1s_A 5'-nucleotidase; hydrol 94.2 0.038 1.3E-06 48.0 4.2 66 48-118 5-96 (530)
54 2wdc_A SOXB, sulfur oxidation 93.4 0.047 1.6E-06 47.9 3.3 37 75-117 125-166 (562)
55 2yeq_A Apased, PHOD, alkaline 93.4 0.18 6.1E-06 43.9 7.0 36 46-85 116-154 (527)
56 3e0j_A DNA polymerase subunit 86.8 2.3 7.9E-05 36.5 7.8 73 45-119 199-310 (476)
57 3flo_A DNA polymerase alpha su 70.6 13 0.00044 31.8 7.2 71 48-118 149-247 (460)
58 2lnb_A Z-DNA-binding protein 1 53.8 23 0.00078 22.5 4.3 52 4-55 17-77 (80)
59 2yxn_A Tyrosyl-tRNA synthetase 51.2 11 0.00037 30.5 3.2 75 1-85 1-77 (322)
60 2jan_A Tyrosyl-tRNA synthetase 49.9 9.4 0.00032 32.3 2.7 73 2-84 1-75 (432)
61 2cya_A Tyrosyl-tRNA synthetase 47.5 15 0.00053 30.1 3.6 74 1-84 1-77 (364)
62 1jil_A Tyrrs, tyrosyl-tRNA syn 47.4 13 0.00046 31.1 3.3 73 2-85 1-76 (420)
63 2dlc_X Tyrosyl-tRNA synthetase 45.3 12 0.0004 31.1 2.6 67 7-82 9-79 (394)
64 1n3l_A Tyrosyl-tRNA synthetase 39.9 19 0.00065 29.6 3.0 66 7-82 7-75 (372)
65 4ex6_A ALNB; modified rossman 38.7 98 0.0034 22.1 6.7 67 47-116 121-187 (237)
66 3naf_A Calcium-activated potas 38.3 87 0.003 28.6 7.2 102 4-115 9-116 (798)
67 1t71_A Phosphatase, conserved 38.0 10 0.00035 30.1 1.1 37 75-112 5-41 (281)
68 4akr_A F-actin-capping protein 37.6 19 0.00064 28.6 2.5 39 1-41 1-39 (281)
69 3k6h_A Nitroreductase family p 37.6 54 0.0018 23.7 5.0 60 1-66 5-72 (197)
70 4h8e_A Undecaprenyl pyrophosph 37.1 24 0.00082 27.6 3.0 77 20-100 84-165 (256)
71 3ugs_B Undecaprenyl pyrophosph 34.0 28 0.00095 26.7 2.9 77 20-100 66-147 (225)
72 2cyc_A Tyrosyl-tRNA synthetase 33.8 43 0.0015 27.5 4.2 65 11-84 7-76 (375)
73 1jw2_A Hemolysin expression mo 32.3 65 0.0022 20.0 3.8 31 3-35 20-50 (72)
74 4eyb_A Beta-lactamase NDM-1; m 32.1 53 0.0018 25.0 4.4 43 74-116 200-252 (270)
75 2j5b_A Tyrosyl-tRNA synthetase 32.1 20 0.00067 29.3 1.9 70 7-85 11-84 (348)
76 2ts1_A Tyrosyl-tRNA synthetase 29.5 45 0.0015 27.9 3.7 71 5-85 2-74 (419)
77 2cyb_A Tyrosyl-tRNA synthetase 29.1 20 0.00069 28.7 1.4 56 19-83 17-73 (323)
78 2hoq_A Putative HAD-hydrolase 28.3 1.7E+02 0.0056 21.0 8.5 67 46-115 110-176 (241)
79 2o97_B NS1, HU-1, DNA-binding 27.4 88 0.003 19.7 4.2 32 7-38 3-34 (90)
80 1mul_A NS2, HU-2, DNA binding 27.3 79 0.0027 19.9 3.9 32 7-38 3-34 (90)
81 1dd4_C 50S ribosomal protein L 25.7 88 0.003 17.0 3.7 29 7-38 3-31 (40)
82 2zp1_A Tyrosyl-tRNA synthetase 25.7 19 0.00063 28.9 0.6 57 18-84 13-70 (314)
83 1u5t_B Defective in vacuolar p 23.7 1.3E+02 0.0043 21.8 4.8 58 2-59 40-99 (169)
84 2fi2_A Zinc finger protein 42; 23.4 89 0.003 20.5 3.5 25 5-29 29-53 (94)
85 3mt5_A Potassium large conduct 23.1 2.2E+02 0.0075 25.7 7.1 58 47-114 4-65 (726)
86 1b8z_A Protein (histonelike pr 23.0 77 0.0026 19.9 3.2 32 7-38 3-34 (90)
87 2vg3_A Undecaprenyl pyrophosph 22.5 61 0.0021 25.7 3.1 76 21-100 116-196 (284)
88 1tke_A Threonyl-tRNA synthetas 22.3 2.4E+02 0.0082 20.8 7.9 104 18-125 110-220 (224)
89 1owf_B IHF-beta, integration H 22.0 1.1E+02 0.0036 19.4 3.8 32 7-38 3-35 (94)
90 2nyv_A Pgpase, PGP, phosphogly 22.0 2.2E+02 0.0074 20.2 6.3 66 46-115 99-165 (222)
91 1p71_A DNA-binding protein HU; 22.0 79 0.0027 20.1 3.1 32 7-38 3-34 (94)
92 2jqt_A H-NS/STPA-binding prote 21.9 82 0.0028 19.5 2.9 33 2-36 14-47 (71)
93 1z9b_A Translation initiation 21.3 51 0.0017 23.1 2.1 37 48-84 43-82 (135)
94 3sd7_A Putative phosphatase; s 21.3 1.8E+02 0.0063 20.7 5.5 68 46-116 126-194 (240)
95 1h3o_A Transcription initiatio 21.3 41 0.0014 21.1 1.5 38 22-59 37-74 (75)
96 2vg0_A Short-chain Z-isoprenyl 20.3 1.2E+02 0.0042 23.0 4.3 75 21-100 64-142 (227)
97 1h3f_A Tyrosyl-tRNA synthetase 20.2 61 0.0021 27.2 2.8 70 7-86 8-82 (432)
98 1zrn_A L-2-haloacid dehalogena 20.0 2.4E+02 0.0081 19.9 7.2 68 46-116 111-178 (232)
No 1
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=4.8e-45 Score=298.86 Aligned_cols=179 Identities=46% Similarity=0.959 Sum_probs=171.1
Q ss_pred HHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeE
Q 029935 6 DLDRQIEHLMQCK--------PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNY 77 (185)
Q Consensus 6 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~l 77 (185)
.++++++++++.. +++++++..||++|+++|.++|++++.++|++|||||||++++|.++++..+..+.+.+
T Consensus 7 ~~d~~i~~l~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~ 86 (299)
T 3e7a_A 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 86 (299)
T ss_dssp CHHHHHHHHHTTTTSCTTCCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSSCE
T ss_pred CHHHHHHHHHhccccCCCcccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCccE
Confidence 3889999987654 79999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEEc
Q 029935 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (185)
Q Consensus 78 v~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (185)
||||||||||++|.|++.++.+++..+|.++++||||||.+.++..++|..++.++| ...+|+.+.++|++||+++.++
T Consensus 87 vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky-~~~l~~~~~~~f~~LPlaaii~ 165 (299)
T 3e7a_A 87 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVD 165 (299)
T ss_dssp EECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTCCCEEEET
T ss_pred EeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHh-hHHHHHHHHHHHhhCCceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999 6789999999999999999999
Q ss_pred CcEEEEecCCCCCCCCHHHhhccccCCC
Q 029935 158 SQVFCLHGGLSPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 158 ~~~l~vHaGi~p~~~~~~~i~~i~R~~~ 185 (185)
++++|||||++|++.++++|++|+||++
T Consensus 166 ~~il~vHGGlsp~~~~l~~i~~i~R~~~ 193 (299)
T 3e7a_A 166 EKIFCCHGGLSPDLQSMEQIRRIMRPTD 193 (299)
T ss_dssp TTEEEESSCCCTTCCCTHHHHTCCSSCC
T ss_pred CeEEEEcCccCcccCCHHHHHhccCCCc
Confidence 9999999999999999999999999974
No 2
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=1e-44 Score=298.97 Aligned_cols=183 Identities=80% Similarity=1.348 Sum_probs=175.4
Q ss_pred ChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEecc
Q 029935 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGD 82 (185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD 82 (185)
++..+++++++++++++++++++..||++|+++|.++|++++..+|++|||||||++++|.++++..+..+.+.+||+||
T Consensus 6 ~~~~~~~~i~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD 85 (309)
T 2ie4_C 6 FTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGD 85 (309)
T ss_dssp CHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSC
T ss_pred hHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCC
Confidence 35679999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEEcCcEEE
Q 029935 83 YVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFC 162 (185)
Q Consensus 83 ~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~ 162 (185)
|||||++|.+++.++.+++..+|.++++||||||.+.++..++|..++.++|+...+|+.+.++|++||+++.++++++|
T Consensus 86 ~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~~l~~~~~~~~~~LPl~~~i~~~il~ 165 (309)
T 2ie4_C 86 YVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFC 165 (309)
T ss_dssp CSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSSTHHHHHHHHHTTSSCSCEEETTTEEE
T ss_pred ccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccHHHHHHHHHHHHhCCceEEEcCcEEE
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999888899999
Q ss_pred EecCCCCCCCCHHHhhccccCCC
Q 029935 163 LHGGLSPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 163 vHaGi~p~~~~~~~i~~i~R~~~ 185 (185)
||||++|.+...+|++.++|+.+
T Consensus 166 vHgGl~p~~~~~~~i~~i~r~~~ 188 (309)
T 2ie4_C 166 LHGGLSPSIDTLDHIRALDRLQE 188 (309)
T ss_dssp CSSCCCTTCCSHHHHHTSCCSSC
T ss_pred ECCCCCCcccCHHHHHhhccccc
Confidence 99999999999999999999863
No 3
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=2.9e-44 Score=299.50 Aligned_cols=179 Identities=49% Similarity=0.866 Sum_probs=173.0
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccC
Q 029935 6 DLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (185)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vd 85 (185)
.++.++++++++.+++++++..||++++++|.++|++++.++|++|||||||++.+|.++++..+..+.+.+||||||||
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 29 RVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp CHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 48899999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEEcCcEEEEec
Q 029935 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHG 165 (185)
Q Consensus 86 rG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHa 165 (185)
||++|.||+.++.+++..+|+++++||||||.+.++..++|..++.++| ...+|+.+.+||++||+++.++++++||||
T Consensus 109 RG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky-~~~l~~~~~~~f~~LPlaaii~~~il~vHG 187 (357)
T 3ll8_A 109 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHG 187 (357)
T ss_dssp SSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHS-CHHHHHHHHHHHHTSCSEEEETTTEEECSS
T ss_pred CCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhcc-chhHHHHHHHHHHhCCcceEEcccEEEEec
Confidence 9999999999999999999999999999999999999999999999999 678999999999999999999999999999
Q ss_pred CCCCCCCCHHHhhccccCCC
Q 029935 166 GLSPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 166 Gi~p~~~~~~~i~~i~R~~~ 185 (185)
|++|+..++++|++|+|+++
T Consensus 188 Glsp~l~~ld~I~~i~R~~e 207 (357)
T 3ll8_A 188 GLSPEINTLDDIRKLDRFKE 207 (357)
T ss_dssp CCCTTCCSHHHHHTCCCSSC
T ss_pred CcCcccCCHHHHhhcccccc
Confidence 99999999999999999864
No 4
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=3e-43 Score=292.16 Aligned_cols=179 Identities=46% Similarity=0.953 Sum_probs=168.9
Q ss_pred HHHHHHHHHHcC--------CCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeE
Q 029935 6 DLDRQIEHLMQC--------KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNY 77 (185)
Q Consensus 6 ~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~l 77 (185)
.++++++++++. .+++++++..||++++++|.++|++++..++++||||||||+++|.++|+.+++.+.+.+
T Consensus 8 ~~d~~i~~l~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~ 87 (330)
T 1fjm_A 8 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 87 (330)
T ss_dssp CHHHHHHHHHHTTTTCTTCCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSSCE
T ss_pred cHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcceE
Confidence 478888888873 579999999999999999999999999999999999999999999999999999889999
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEEc
Q 029935 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (185)
Q Consensus 78 v~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (185)
||+||||||||+|.||++++.+++..+|.++++||||||.+.++..++|..++..+| ...+|+.+.+||++||+++.++
T Consensus 88 vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPl~~~i~ 166 (330)
T 1fjm_A 88 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVD 166 (330)
T ss_dssp EECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTCCCEEEET
T ss_pred EeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhc-cHHHHHHHHHHHHhCCceEEEc
Confidence 999999999999999999999999999999999999999999999999999999998 4678999999999999988888
Q ss_pred CcEEEEecCCCCCCCCHHHhhccccCCC
Q 029935 158 SQVFCLHGGLSPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 158 ~~~l~vHaGi~p~~~~~~~i~~i~R~~~ 185 (185)
++++|||||++|++..++|++++.|+.+
T Consensus 167 ~~i~~vHgGl~p~~~~l~qi~~i~r~~e 194 (330)
T 1fjm_A 167 EKIFCCHGGLSPDLQSMEQIRRIMRPTD 194 (330)
T ss_dssp TTEEEESSCCCTTCSCHHHHHHCCSSCC
T ss_pred CcEEEEccCCCcccCCHHHHhhhhcCcc
Confidence 9999999999999999999999999864
No 5
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=5e-43 Score=288.74 Aligned_cols=183 Identities=36% Similarity=0.655 Sum_probs=171.8
Q ss_pred CChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecC----CCEEEEeCCCCCHHHHHHHHHhcCCCCCC-e
Q 029935 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRIGGNAPDT-N 76 (185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~vigDIHG~~~~l~~ll~~~~~~~~~-~ 76 (185)
+|.+.++++++.++++..++++++..||.+++++|.++|++++++ +|++|||||||++.+|.++++..+..+.+ +
T Consensus 11 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~ 90 (315)
T 3h63_A 11 VTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP 90 (315)
T ss_dssp CCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBC
T ss_pred CCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHhCCCCCCCE
Confidence 367889999999999999999999999999999999999998875 45999999999999999999999887765 5
Q ss_pred EEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEE
Q 029935 77 YLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALI 156 (185)
Q Consensus 77 lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i 156 (185)
+||+||+||||++|.||+.++.+++..+|+++++||||||.+.++..++|..++.++| ...+|+.+.++|++||+++.+
T Consensus 91 ~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~-~~~l~~~~~~~f~~LPla~ii 169 (315)
T 3h63_A 91 YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCI 169 (315)
T ss_dssp EEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTSCSEEEE
T ss_pred EEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHh-hhHHHHHHHHHHhcCCcEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999 578999999999999999998
Q ss_pred cCcEEEEecCC-CCCCCCHHHhhccccCCC
Q 029935 157 ESQVFCLHGGL-SPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 157 ~~~~l~vHaGi-~p~~~~~~~i~~i~R~~~ 185 (185)
+++++|||||+ +|+...+++|++|+|+++
T Consensus 170 ~~~il~vHGGl~sp~~~~l~~i~~i~R~~~ 199 (315)
T 3h63_A 170 NGKVLIMHGGLFSEDGVTLDDIRKIERNRQ 199 (315)
T ss_dssp TTTEEECSSCCCSSTTCCHHHHHHCCCSSC
T ss_pred cCCEEEeCCCCCCcccCCHHHHHhCccccc
Confidence 89999999999 788899999999999864
No 6
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-43 Score=291.00 Aligned_cols=182 Identities=36% Similarity=0.668 Sum_probs=172.4
Q ss_pred ChhHHHHHH-HHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCC------EEEEeCCCCCHHHHHHHHHhcCCCCCC
Q 029935 3 SQADLDRQI-EHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCP------VTVCGDIHGQFHDLVELFRIGGNAPDT 75 (185)
Q Consensus 3 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~------i~vigDIHG~~~~l~~ll~~~~~~~~~ 75 (185)
|.+.+++++ ++++++++++++++..||++++++|.++|++++...+ ++|||||||++.+|.++++.++..+.+
T Consensus 13 ~~~~~~~~i~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~ 92 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGPK 92 (335)
T ss_dssp CHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHHHHHHCCCBTT
T ss_pred CHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 568899999 9999999999999999999999999999999988777 999999999999999999999987654
Q ss_pred -eEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceE
Q 029935 76 -NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTA 154 (185)
Q Consensus 76 -~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 154 (185)
++||+||+||||++|.||+.++.+++..+|+++++||||||.+.++..++|..++.++| ...+|+.+.+||++||+++
T Consensus 93 ~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~-~~~l~~~~~~~f~~LPlaa 171 (335)
T 3icf_A 93 HTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKY-SQRIFNMFAQSFESLPLAT 171 (335)
T ss_dssp EEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHS-CHHHHHHHHHHHTTSCSEE
T ss_pred cEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhc-cHHHHHHHHHHHhhcceeE
Confidence 69999999999999999999999999999999999999999999999999999999999 5789999999999999999
Q ss_pred EEcCcEEEEecCC-CCCCCCHHHhhccccCCC
Q 029935 155 LIESQVFCLHGGL-SPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 155 ~i~~~~l~vHaGi-~p~~~~~~~i~~i~R~~~ 185 (185)
.++++++|||||+ +|+...+++|+.|+|+++
T Consensus 172 ii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~ 203 (335)
T 3icf_A 172 LINNDYLVMHGGLPSDPSATLSDFKNIDRFAQ 203 (335)
T ss_dssp EETTTEEECSSCCCSCTTCCHHHHHTCCCSSC
T ss_pred EEcCcEEEecCCcCCCccCCHHHHHhCccccc
Confidence 9988999999999 789999999999999864
No 7
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=1.1e-42 Score=300.38 Aligned_cols=180 Identities=48% Similarity=0.861 Sum_probs=171.7
Q ss_pred hHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEecccc
Q 029935 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~v 84 (185)
..++.++++++++.+++++++..||++++++|.++|++++..+|++||||||||+++|.++|+..+..+.+.+|||||||
T Consensus 41 ~~~d~l~~~~~~~~~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyV 120 (521)
T 1aui_A 41 PRVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYV 120 (521)
T ss_dssp BCHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCS
T ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcC
Confidence 34789999999999999999999999999999999999999999999999999999999999988888889999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEEcCcEEEEe
Q 029935 85 DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLH 164 (185)
Q Consensus 85 drG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vH 164 (185)
|||++|.||+.++..++..+|+++++||||||.+.++..++|..++..+|+ ..+|+.+.+||++||+++.++++++|||
T Consensus 121 DRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~-~~l~~~~~~~f~~LPlaaii~~~il~VH 199 (521)
T 1aui_A 121 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMDAFDCLPLAALMNQQFLCVH 199 (521)
T ss_dssp SSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC-HHHHHHHHHHHTTSCCEEEETTTEEEES
T ss_pred CCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh-hHHHHHHHHHHHhCCceEEecCCceEEC
Confidence 999999999999999999999999999999999999999999999999995 7899999999999999988889999999
Q ss_pred cCCCCCCCCHHHhhccccCCC
Q 029935 165 GGLSPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 165 aGi~p~~~~~~~i~~i~R~~~ 185 (185)
||++|++..+++|++|+|+++
T Consensus 200 GGlsP~~~sld~I~~I~R~~e 220 (521)
T 1aui_A 200 GGLSPEINTLDDIRKLDRFKE 220 (521)
T ss_dssp SCCCTTCCSHHHHHHSCCSSS
T ss_pred CCcCcccCCHHHhhhccCCcC
Confidence 999999999999999999863
No 8
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=1.7e-37 Score=269.05 Aligned_cols=182 Identities=35% Similarity=0.655 Sum_probs=168.5
Q ss_pred ChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecC----CCEEEEeCCCCCHHHHHHHHHhcCCCCC-CeE
Q 029935 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVK----CPVTVCGDIHGQFHDLVELFRIGGNAPD-TNY 77 (185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~----~~i~vigDIHG~~~~l~~ll~~~~~~~~-~~l 77 (185)
+...++++++.++++..+++.++..++.++.+++..+|+++..+ ++++|||||||++++|.++++..+..+. +.+
T Consensus 165 tl~~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~ 244 (477)
T 1wao_1 165 TISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPY 244 (477)
T ss_dssp CHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCE
T ss_pred cHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeE
Confidence 45678999999999999999999999999999999999998765 5699999999999999999999988765 569
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEEc
Q 029935 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIE 157 (185)
Q Consensus 78 v~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 157 (185)
||+||+||||++|.+|+.++..++..+|.++++||||||.+.++..++|..++.++|+ ..+|+.+.++|++||+++.++
T Consensus 245 v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~lp~~~~~~ 323 (477)
T 1wao_1 245 IFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT-AQMYELFSEVFEWLPLAQCIN 323 (477)
T ss_dssp EEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC-TTHHHHHHHHHTTSCSEEEET
T ss_pred EEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhh-HHHHHHHHHHhccCCcEEEEc
Confidence 9999999999999999999999999999999999999999999999999999999996 578999999999999999888
Q ss_pred CcEEEEecCC-CCCCCCHHHhhccccCCC
Q 029935 158 SQVFCLHGGL-SPSLDTLDNIRALDRIQE 185 (185)
Q Consensus 158 ~~~l~vHaGi-~p~~~~~~~i~~i~R~~~ 185 (185)
++++|||||+ +|....+++|+++.|+++
T Consensus 324 ~~~~~vHgg~~~~~~~~l~~i~~~~r~~~ 352 (477)
T 1wao_1 324 GKVLIMHGGLFSEDGVTLDDIRKIERNRQ 352 (477)
T ss_dssp TTEEECSSCCCSSSCCCHHHHHTCCCSSC
T ss_pred CcEEEECCCCCccccCCHHHHHhccCCCC
Confidence 8999999999 677889999999999853
No 9
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.95 E-value=3.5e-29 Score=209.19 Aligned_cols=147 Identities=22% Similarity=0.257 Sum_probs=117.7
Q ss_pred hcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCC--------CCCeEEEeccccCCCCCcHHHHHHHHHHHH---hC
Q 029935 36 LVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNA--------PDTNYLFMGDYVDRGYYSVETVTLLVALKV---RY 104 (185)
Q Consensus 36 l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~--------~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~---~~ 104 (185)
+..++++++..+|++|||||||++++|.++++.++.. +.+.+||+||+||||+++.++++++.+++. .+
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 6788999999999999999999999999999987754 357899999999999999999999999986 68
Q ss_pred CCcEEEEcCCCchhhhhhhhC----CHHHHHHHhC--CHHHH---HHHHHHhhcCCceEEEcCcEEEEecCCCCCCC---
Q 029935 105 RDRITILRGNHESRQITQVYG----FYDECLRKYG--NANVW---KHFTDLFDYLPLTALIESQVFCLHGGLSPSLD--- 172 (185)
Q Consensus 105 p~~v~~l~GNHE~~~~~~~~~----~~~~~~~~~~--~~~~~---~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~~~--- 172 (185)
|.++++|+||||.+.++...+ ......+.++ ...+| ....+|++.+|+++.+ ++++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~lP~~~~~-~~~~~vHgGl~p~~~~~~ 218 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKI-NDVLYMHGGISSEWISRE 218 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSCGGGGGSTTBHHHHHHHTCCSEEEE-TTEEEESSCCCHHHHHTT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhcccHHHHHHHhHHHHHHHhhCCeEEEE-CCEEEEECCCChhhcccC
Confidence 899999999999998863211 1111111111 12333 3567899999999987 579999999999763
Q ss_pred -CHHHhhccccC
Q 029935 173 -TLDNIRALDRI 183 (185)
Q Consensus 173 -~~~~i~~i~R~ 183 (185)
.+++++.+.|+
T Consensus 219 ~~l~~i~~~~r~ 230 (342)
T 2z72_A 219 LTLDKANALYRA 230 (342)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHhhh
Confidence 78888887764
No 10
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.95 E-value=4.1e-29 Score=203.57 Aligned_cols=132 Identities=21% Similarity=0.349 Sum_probs=106.4
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCC-CCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhC
Q 029935 47 CPVTVCGDIHGQFHDLVELFRIGGN-APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~-~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (185)
|+++||||||||+++|.++++.+++ .+.+.+||+||+|||||++.++++++.++. .++++|+||||.+.++..++
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~----~~~~~v~GNHe~~~l~~~~g 76 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLG----DSVRLVLGNHDLHLLAVFAG 76 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTG----GGEEECCCHHHHHHHHHHTT
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCC----CceEEEECCCcHHHHhHhcC
Confidence 6899999999999999999999987 457899999999999999999999998873 46999999999999987766
Q ss_pred CHHH----HHHHhCCHHHHHHHHHHhhcCCceEEEcC-cEEEEecCCCCCCCCHHHhhccccC
Q 029935 126 FYDE----CLRKYGNANVWKHFTDLFDYLPLTALIES-QVFCLHGGLSPSLDTLDNIRALDRI 183 (185)
Q Consensus 126 ~~~~----~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHaGi~p~~~~~~~i~~i~R~ 183 (185)
+... ...++..........+|++.||+++.+++ +++|||||++|.+ ..++++.+.|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~ 138 (280)
T 2dfj_A 77 ISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARD 138 (280)
T ss_dssp SSCCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHH
T ss_pred CcccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHH
Confidence 5321 11111111234567899999999988776 8999999999999 47777766554
No 11
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.92 E-value=9.8e-26 Score=181.87 Aligned_cols=134 Identities=25% Similarity=0.334 Sum_probs=104.0
Q ss_pred HhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhcCCCCC-CeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEc
Q 029935 34 AILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIGGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILR 112 (185)
Q Consensus 34 ~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~~-~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~ 112 (185)
..+++++.+....+|+++||||||++++|.++++.++..+. |.+||+||++|||+.+.++++++.++ ++++|+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~~~v~ 79 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GAYSVL 79 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TCEECC
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CCEEEe
Confidence 45677888887788999999999999999999999887665 99999999999999999999998764 399999
Q ss_pred CCCchhhhhhhhCCHHH-HHHHhCCH--------HHHHHHHHHhhcCCceEEEc-CcEEEEecCCCCCCCC
Q 029935 113 GNHESRQITQVYGFYDE-CLRKYGNA--------NVWKHFTDLFDYLPLTALIE-SQVFCLHGGLSPSLDT 173 (185)
Q Consensus 113 GNHE~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~lP~~~~i~-~~~l~vHaGi~p~~~~ 173 (185)
||||...++...++..+ +..+++.. .+.....+|++.||++..++ ++++|||||++|.++.
T Consensus 80 GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~ 150 (262)
T 2qjc_A 80 GNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPV 150 (262)
T ss_dssp CHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCG
T ss_pred CcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCc
Confidence 99999988765554322 22233211 12356778999999998875 4899999999998764
No 12
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.87 E-value=9.4e-23 Score=159.94 Aligned_cols=121 Identities=24% Similarity=0.294 Sum_probs=92.7
Q ss_pred ecCCCEEEEeCCCCCHHHHHHHHHhcCCC-CCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhh
Q 029935 44 PVKCPVTVCGDIHGQFHDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQ 122 (185)
Q Consensus 44 ~~~~~i~vigDIHG~~~~l~~ll~~~~~~-~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~ 122 (185)
...+++++|||+||++.+|.++++.++.. ..+.+|++||++|||+.+.++++++.+ .++++|+||||.+..+.
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~~~ 83 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMIDG 83 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHHhh
Confidence 34689999999999999999999998764 568999999999999999999987653 25999999999987654
Q ss_pred hhCCHH-HHHHHhC----------CHHHHHHHHHHhhcCCceEEE---cCcEEEEecCCCCC
Q 029935 123 VYGFYD-ECLRKYG----------NANVWKHFTDLFDYLPLTALI---ESQVFCLHGGLSPS 170 (185)
Q Consensus 123 ~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHaGi~p~ 170 (185)
..+... ......+ ...+++...+|++.||....+ +.+++|||||++|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 84 LSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 321110 0001111 123557788999999998865 46899999998664
No 13
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.78 E-value=2.4e-19 Score=142.71 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=90.5
Q ss_pred cCCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhh
Q 029935 45 VKCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (185)
Q Consensus 45 ~~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~ 124 (185)
..||+++||||||++.+|.++++.+. +.|.+|++||++++|+++.++++++.++. .+++|+||||........
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~ 74 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIGRLS 74 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTCCCC
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhccCC
Confidence 45899999999999999999999887 77899999999999999999999998874 369999999998764322
Q ss_pred C--C--HHHHHHHhCCHHHHHHHHHHhhcCCceEEEcCcEEEEecCCCCC
Q 029935 125 G--F--YDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPS 170 (185)
Q Consensus 125 ~--~--~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHaGi~p~ 170 (185)
. + .......+....+.....+|++.+|..... ++++++||++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 75 LDEFNPVARFASYWTTMQLQAEHLQYLESLPNRMID-GDWTVVHGSPRHP 123 (246)
T ss_dssp CC--CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEE-TTEEEESSCSSST
T ss_pred ccccCHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEE-CCEEEEECCcCCc
Confidence 1 0 000011111122335667899999998874 6899999998653
No 14
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.78 E-value=1e-18 Score=138.80 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=89.0
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcC---CC--CCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhh
Q 029935 47 CPVTVCGDIHGQFHDLVELFRIGG---NA--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQIT 121 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~---~~--~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~ 121 (185)
|++++|||+||++.+|.++++.+. .. +.|.+|++||++|+|+.+.++++++.++.... ++++|+||||.....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNhD~~~~~ 79 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKYDQIIAM 79 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecchHHHhhc
Confidence 689999999999999999998775 44 56899999999999999999999999887543 499999999998754
Q ss_pred hhhCC-------------HHHHHHHhCCHHHHHHHHHHhhcCCceEEE--cC-cEEEEecCC
Q 029935 122 QVYGF-------------YDECLRKYGNANVWKHFTDLFDYLPLTALI--ES-QVFCLHGGL 167 (185)
Q Consensus 122 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHaGi 167 (185)
..... .......+....+.....+|++.+|..... ++ +++++||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p 141 (252)
T 1nnw_A 80 SDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSP 141 (252)
T ss_dssp SCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCS
T ss_pred cccccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCC
Confidence 22110 000111121223445667899999977654 33 799999998
No 15
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.77 E-value=2.9e-19 Score=144.51 Aligned_cols=119 Identities=18% Similarity=0.120 Sum_probs=90.5
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhC
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (185)
..+|++|||||||+.+|.++++.+...+.|.+|++||++++||.+.++++++.++. .+++|+||||........+
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~ 85 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWHGVRK 85 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHHHHTT
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHHhhcc
Confidence 34899999999999999999998877778999999999999999999999988763 4899999999988764322
Q ss_pred ---CHHHH------HHHhCCHHHHHHHHHHhhcCCceEEE--cC-cEEEEecCCCC
Q 029935 126 ---FYDEC------LRKYGNANVWKHFTDLFDYLPLTALI--ES-QVFCLHGGLSP 169 (185)
Q Consensus 126 ---~~~~~------~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHaGi~p 169 (185)
+.... ...|....+.+...+|++.||....+ ++ +++++||.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~ 141 (270)
T 3qfm_A 86 ELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDK 141 (270)
T ss_dssp CSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTB
T ss_pred ccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCC
Confidence 11111 01121122335678999999988654 34 79999987643
No 16
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.48 E-value=6.8e-14 Score=108.74 Aligned_cols=69 Identities=19% Similarity=0.342 Sum_probs=59.2
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCC--------CcHHHHHHHHHHHHhCCCcEEEEcCCCchh
Q 029935 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGY--------YSVETVTLLVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~--------~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
|+++++||+||++..+.++++.+...+.|.+|++||++++|+ .+.++++++.++. .++++++||||..
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~ 101 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNCDSE 101 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTTCCH
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCCchH
Confidence 799999999999999999998775556789999999999998 3688888887764 3599999999986
Q ss_pred h
Q 029935 119 Q 119 (185)
Q Consensus 119 ~ 119 (185)
.
T Consensus 102 ~ 102 (208)
T 1su1_A 102 V 102 (208)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.32 E-value=5.6e-13 Score=101.26 Aligned_cols=86 Identities=21% Similarity=0.237 Sum_probs=64.6
Q ss_pred CCEEEEeCCCC--CHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhh
Q 029935 47 CPVTVCGDIHG--QFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (185)
Q Consensus 47 ~~i~vigDIHG--~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~ 124 (185)
||++++||+|| +..+|.++++.+. .+.|.+|++||++++ ++++++.++. .++++++||||...
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~~----- 87 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYPD----- 87 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCGG-----
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcHH-----
Confidence 69999999997 7777888887654 567899999999983 7888877663 35999999999752
Q ss_pred CCHHHHHHHhCCHHHHHHHHHHhhcCCceEEE---cCcEEEEecCCC
Q 029935 125 GFYDECLRKYGNANVWKHFTDLFDYLPLTALI---ESQVFCLHGGLS 168 (185)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHaGi~ 168 (185)
|+..+|....+ +.+++++||...
T Consensus 88 ---------------------~~~~lp~~~~~~~~g~~i~l~HG~~~ 113 (178)
T 2kkn_A 88 ---------------------VKEHLPFSKVLLVEGVTIGMCHGWGA 113 (178)
T ss_dssp ---------------------GGGTSCSCEEEEETTEEEEECCSCCC
T ss_pred ---------------------HHhhCCcceEEEECCEEEEEECCCCC
Confidence 23456654333 347999998753
No 18
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.30 E-value=3.4e-12 Score=98.69 Aligned_cols=74 Identities=8% Similarity=0.134 Sum_probs=58.5
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhh
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~ 120 (185)
.||++++||+|++...+.++++.+...+.|.+|++||++++|+.+.+..+++..++. .+..+++++||||....
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~-~~~pv~~v~GNHD~~~~ 78 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSE-AHLPTAYVPGPQDAPIW 78 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGG-GCSCEEEECCTTSCSHH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEECCCCCchhH
Confidence 579999999999999999988776544678999999999999766655555555543 23459999999998653
No 19
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.24 E-value=3.8e-12 Score=99.23 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=65.0
Q ss_pred ccCcceecCCCEEEEeCCCCCHHH--HHHHH-HhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCC
Q 029935 38 EEWNVQPVKCPVTVCGDIHGQFHD--LVELF-RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGN 114 (185)
Q Consensus 38 ~~~~~~~~~~~i~vigDIHG~~~~--l~~ll-~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GN 114 (185)
+..+.-.+.|++++|||+|++..+ +.+.+ +.+...+.|.+|++||+++ .++++++.++. .++++|+||
T Consensus 17 ~~~~~~~m~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GN 87 (215)
T 2a22_A 17 RGSSSTDFGDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGD 87 (215)
T ss_dssp ------CCCEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC-----HHHHHHHHHHC----SCEEECCCT
T ss_pred CCCCccccCcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC-----HHHHHHHHHcC----CCEEEecCC
Confidence 333333446799999999998632 32222 2222345789999999997 57788777653 359999999
Q ss_pred CchhhhhhhhCCHHHHHHHhCCHHHHHHHHHHhhcCCceEEE--c-CcEEEEecCCC
Q 029935 115 HESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALI--E-SQVFCLHGGLS 168 (185)
Q Consensus 115 HE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~~i--~-~~~l~vHaGi~ 168 (185)
||....... .+|+..+|....+ + .+++++||.+.
T Consensus 88 HD~~~~~~~--------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 88 LDSAIFNPD--------------------PESNGVFPEYVVVQIGEFKIGLMHGNQV 124 (215)
T ss_dssp TCCSCCBCC--------------------GGGTBCCCSEEEEEETTEEEEEECSTTS
T ss_pred CcCcccccC--------------------hhhHhhCCceEEEecCCeEEEEEcCCcc
Confidence 998653310 1245677755433 3 37999999764
No 20
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.20 E-value=8.8e-12 Score=95.51 Aligned_cols=65 Identities=15% Similarity=0.269 Sum_probs=53.4
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhhh
Q 029935 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~ 120 (185)
||++++||+||+..++.++++.+.....|.+|++||++|. ++++.+.++ +.++++|+||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 7999999999999999999988765667999999999973 566665543 2469999999998654
No 21
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.18 E-value=3.8e-11 Score=91.79 Aligned_cols=64 Identities=22% Similarity=0.289 Sum_probs=47.2
Q ss_pred CCEEEEeCCCCCHH--HHHH-HHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchhh
Q 029935 47 CPVTVCGDIHGQFH--DLVE-LFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (185)
Q Consensus 47 ~~i~vigDIHG~~~--~l~~-ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (185)
|+++++||+|++.. ++.+ +.+.+.....|.+|++||+++ .++++++.++. ..+++++||||...
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~~ 77 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDENL 77 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCCT
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCccc
Confidence 79999999999753 2323 333444456789999999996 57777776653 36999999999753
No 22
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.17 E-value=1.6e-11 Score=97.16 Aligned_cols=74 Identities=8% Similarity=0.085 Sum_probs=56.8
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCc--------------------------HHHHHHHHH
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS--------------------------VETVTLLVA 99 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~--------------------------~e~l~~l~~ 99 (185)
.||++++||+|++...+.++++.+...+.|.+|++||++++|+.+ ....+++..
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 579999999999999999998877555679999999999998652 223444444
Q ss_pred HHHhCCCcEEEEcCCCchhhh
Q 029935 100 LKVRYRDRITILRGNHESRQI 120 (185)
Q Consensus 100 l~~~~p~~v~~l~GNHE~~~~ 120 (185)
++. .+..+++++||||....
T Consensus 85 l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 85 IGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHT-TCSEEEEECCTTSCCHH
T ss_pred HHh-cCCcEEEEcCCCCchhh
Confidence 442 23469999999998654
No 23
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.12 E-value=2.5e-11 Score=91.52 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=45.7
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchh
Q 029935 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
||++++||+||+..++.++++.+.. +.|.++++||+.. ++++ .+. .++++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 6899999999999999999998765 6789999999721 1222 222 2599999999975
No 24
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.05 E-value=1.8e-10 Score=88.10 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCCCHHHH-------------HHHHHhcCC--CCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEE
Q 029935 46 KCPVTVCGDIHGQFHDL-------------VELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI 110 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l-------------~~ll~~~~~--~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~ 110 (185)
.|+++++||+|+....+ .++++.+.. .+.|.+|++||++++|++..++++++.++. ..+++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~----~~~~~ 76 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALP----GRKIL 76 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSS----SEEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCC----CCEEE
Confidence 47899999999654322 233333332 467899999999999988888888887763 45999
Q ss_pred EcCCCchhh
Q 029935 111 LRGNHESRQ 119 (185)
Q Consensus 111 l~GNHE~~~ 119 (185)
++||||...
T Consensus 77 v~GNhD~~~ 85 (195)
T 1xm7_A 77 VMGNHDKDK 85 (195)
T ss_dssp ECCTTCCCH
T ss_pred EeCCCCCch
Confidence 999999854
No 25
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=98.89 E-value=4.4e-09 Score=83.28 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=50.7
Q ss_pred CCEEEEeCCCCCH------------HHHHHHHHhcCCC--CCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEc
Q 029935 47 CPVTVCGDIHGQF------------HDLVELFRIGGNA--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILR 112 (185)
Q Consensus 47 ~~i~vigDIHG~~------------~~l~~ll~~~~~~--~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~ 112 (185)
||++++||+|++. ..|.++++.+... +.|.+|++||+++.|+.+ .++.+.+.-...+..+++++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~l~~p~~~v~ 78 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPE--EYQVARQILGSLNYPLYLIP 78 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHH--HHHHHHHHHTTCSSCEEEEC
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHH--HHHHHHHHHHhcCCCEEEEC
Confidence 5899999999985 6788888776543 468999999999988642 22233322222234599999
Q ss_pred CCCchhh
Q 029935 113 GNHESRQ 119 (185)
Q Consensus 113 GNHE~~~ 119 (185)
||||...
T Consensus 79 GNHD~~~ 85 (274)
T 3d03_A 79 GNHDDKA 85 (274)
T ss_dssp CTTSCHH
T ss_pred CCCCCHH
Confidence 9999853
No 26
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=98.87 E-value=2.5e-09 Score=87.00 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=53.8
Q ss_pred ecCCCEEEEeCCCCC------------HHHHHHHHHhcCC--CCCCeEEEeccccCCCCCcH--HHHHHHHHHHHhCCCc
Q 029935 44 PVKCPVTVCGDIHGQ------------FHDLVELFRIGGN--APDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYRDR 107 (185)
Q Consensus 44 ~~~~~i~vigDIHG~------------~~~l~~ll~~~~~--~~~~~lv~lGD~vdrG~~~~--e~l~~l~~l~~~~p~~ 107 (185)
...++++++||+|.. ...+.++++.+.. ...|.+|++||+++.|.... .+.+++..+....+..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~p 102 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAE 102 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCC
Confidence 346899999999963 6778888887664 56789999999999886421 2333344443322346
Q ss_pred EEEEcCCCchh
Q 029935 108 ITILRGNHESR 118 (185)
Q Consensus 108 v~~l~GNHE~~ 118 (185)
+++++||||..
T Consensus 103 v~~v~GNHD~~ 113 (330)
T 3ib7_A 103 LVWVMGNHDDR 113 (330)
T ss_dssp EEECCCTTSCH
T ss_pred EEEeCCCCCCH
Confidence 99999999964
No 27
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.82 E-value=5.1e-09 Score=86.32 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=51.1
Q ss_pred cCCCEEEEeCCC-C----C-----------HHHHHHHHHhcCCCCCCeEEEecc-ccCCCCCcHHH----HHHHHHHHHh
Q 029935 45 VKCPVTVCGDIH-G----Q-----------FHDLVELFRIGGNAPDTNYLFMGD-YVDRGYYSVET----VTLLVALKVR 103 (185)
Q Consensus 45 ~~~~i~vigDIH-G----~-----------~~~l~~ll~~~~~~~~~~lv~lGD-~vdrG~~~~e~----l~~l~~l~~~ 103 (185)
..||++.+||+| | . ...|.++++.+.....|.+|++|| ++|++..+.+. .+++.++...
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~ 96 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT 96 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 467999999999 7 3 455777777666666789999999 99999877653 4555555533
Q ss_pred CCCcEEEEcCCCchhh
Q 029935 104 YRDRITILRGNHESRQ 119 (185)
Q Consensus 104 ~p~~v~~l~GNHE~~~ 119 (185)
. .++++.||||...
T Consensus 97 ~--pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 97 A--PVVVLPGNHDWKG 110 (336)
T ss_dssp S--CEEECCC------
T ss_pred C--CEEEECCCCCccc
Confidence 3 4999999999864
No 28
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.79 E-value=8.8e-09 Score=86.70 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=54.8
Q ss_pred cCCCEEEEeCCCCCH-------------HHHHHHHHhcCCCCCCeEEEeccccCCCCCcHH----HHHHHHHHHHhCCCc
Q 029935 45 VKCPVTVCGDIHGQF-------------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVE----TVTLLVALKVRYRDR 107 (185)
Q Consensus 45 ~~~~i~vigDIHG~~-------------~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e----~l~~l~~l~~~~p~~ 107 (185)
..||++.+||+|+.. .+|.++++.+.....|.+|++||++|++..+.+ +.+++..++. .+-.
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~~~p 97 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-NNIK 97 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-TTCE
T ss_pred CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-cCCc
Confidence 468999999999873 457788877766778999999999999854433 3444544532 2346
Q ss_pred EEEEcCCCchhh
Q 029935 108 ITILRGNHESRQ 119 (185)
Q Consensus 108 v~~l~GNHE~~~ 119 (185)
+++|.||||...
T Consensus 98 v~~v~GNHD~~~ 109 (386)
T 3av0_A 98 VYIVAGNHEMPR 109 (386)
T ss_dssp EEECCCGGGSCS
T ss_pred EEEEcCCCCCCc
Confidence 999999999754
No 29
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.74 E-value=1.8e-08 Score=83.08 Aligned_cols=71 Identities=21% Similarity=0.201 Sum_probs=51.1
Q ss_pred CCEEEEeCCCCCH-------------HHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHH----HHHHHHHhCCCcEE
Q 029935 47 CPVTVCGDIHGQF-------------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVT----LLVALKVRYRDRIT 109 (185)
Q Consensus 47 ~~i~vigDIHG~~-------------~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~----~l~~l~~~~p~~v~ 109 (185)
||++.+||+|... ..+.++++.+.....|.+|++||++|++..+.+.+. .+..++. .+..++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE-HSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-TTCCEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-CCCcEE
Confidence 6899999999874 456667776655677999999999998754544443 3333332 234599
Q ss_pred EEcCCCchh
Q 029935 110 ILRGNHESR 118 (185)
Q Consensus 110 ~l~GNHE~~ 118 (185)
++.||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999985
No 30
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.74 E-value=7.9e-09 Score=84.29 Aligned_cols=64 Identities=20% Similarity=0.252 Sum_probs=46.1
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCc--HHHHHHHHHHHHhCCCcEEEEcCCCchhh
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITILRGNHESRQ 119 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~--~e~l~~l~~l~~~~p~~v~~l~GNHE~~~ 119 (185)
.||+++|||+||+...+ ...+.|.+|++||++++|... .++++++.++. . ..+++|.||||..+
T Consensus 59 ~mri~~iSD~H~~~~~l-------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI-------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELTF 124 (296)
T ss_dssp EEEEEEEBCCTTCCTTC-------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGGG
T ss_pred CeEEEEEeeCCCCcchh-------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCccccc
Confidence 47999999999997653 235678999999999998732 22344443321 1 34899999999864
No 31
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=98.72 E-value=5.6e-09 Score=84.09 Aligned_cols=73 Identities=15% Similarity=0.038 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCCCH-------------------HHHHHHHHhcCCCCCCeEEEeccccCCCCC----cHHHHHHHHHHHH
Q 029935 46 KCPVTVCGDIHGQF-------------------HDLVELFRIGGNAPDTNYLFMGDYVDRGYY----SVETVTLLVALKV 102 (185)
Q Consensus 46 ~~~i~vigDIHG~~-------------------~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~----~~e~l~~l~~l~~ 102 (185)
.+++++|||+|... ..|.++++.+...+.+.+|++||+++.|.. ..+.++.+.+.-.
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~ 84 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 84 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHH
Confidence 46899999999875 557777776654667899999999998752 2344444444333
Q ss_pred hCCCcEEEEcCCCchh
Q 029935 103 RYRDRITILRGNHESR 118 (185)
Q Consensus 103 ~~p~~v~~l~GNHE~~ 118 (185)
..+..+++++||||..
T Consensus 85 ~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 85 ACSVDVHHVWGNHEFY 100 (322)
T ss_dssp TTCSEEEECCCHHHHH
T ss_pred hcCCcEEEecCCCCcc
Confidence 3445799999999994
No 32
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=98.55 E-value=8.4e-08 Score=81.61 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=51.5
Q ss_pred cCCCEEEEeCCCCC--------------------------HHHHHHHHHhcCCCCCCeEEEeccccCCCCCc--HHHHHH
Q 029935 45 VKCPVTVCGDIHGQ--------------------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYS--VETVTL 96 (185)
Q Consensus 45 ~~~~i~vigDIHG~--------------------------~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~--~e~l~~ 96 (185)
..++++++||+|.. ...+.++++.+.....|.+|++||+++.|... .++.+.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~ 117 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKK 117 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHH
Confidence 35689999999974 34567777665545568999999999988643 333444
Q ss_pred HHHHHHhCCCcEEEEcCCCchh
Q 029935 97 LVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 97 l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
+..+.. .+..+++++||||..
T Consensus 118 l~~l~~-~~~~~~~v~GNHD~~ 138 (443)
T 2xmo_A 118 LTQVEK-NGTQVFVVPGNHDIN 138 (443)
T ss_dssp HHHHHH-TTCEEEEECCTTTSS
T ss_pred HHHHHh-CCCeEEEECCcCCCC
Confidence 444432 234699999999985
No 33
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.48 E-value=8.6e-08 Score=80.55 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=51.5
Q ss_pred CCEEEEeCCCCCHH----------------HHHHHHHhcCCCCCCeEEEecccc-CCCCCcHHHHH----HHHHHHHhCC
Q 029935 47 CPVTVCGDIHGQFH----------------DLVELFRIGGNAPDTNYLFMGDYV-DRGYYSVETVT----LLVALKVRYR 105 (185)
Q Consensus 47 ~~i~vigDIHG~~~----------------~l~~ll~~~~~~~~~~lv~lGD~v-drG~~~~e~l~----~l~~l~~~~p 105 (185)
||++.+||+|.... .|..+++.+.....|.+|++||++ |++..+.+.+. ++..+...
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-- 78 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-- 78 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH--
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC--
Confidence 68999999997654 566676666556678999999999 88776655443 34444433
Q ss_pred CcEEEEcCCCchh
Q 029935 106 DRITILRGNHESR 118 (185)
Q Consensus 106 ~~v~~l~GNHE~~ 118 (185)
..++++.||||..
T Consensus 79 ~~v~~i~GNHD~~ 91 (379)
T 3tho_B 79 APVVVLPGNQDWK 91 (379)
T ss_dssp SCEEECCCTTSCT
T ss_pred CCEEEEcCCCccc
Confidence 3599999999964
No 34
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.35 E-value=4.8e-07 Score=77.31 Aligned_cols=56 Identities=25% Similarity=0.261 Sum_probs=44.0
Q ss_pred cCCCEEEEeCCCCCH------------HHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHH
Q 029935 45 VKCPVTVCGDIHGQF------------HDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL 100 (185)
Q Consensus 45 ~~~~i~vigDIHG~~------------~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l 100 (185)
..+|++.+||+|-.. ..|.++++.+.....|.+|++||++|++..+.+++..+.+.
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~ 98 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLEL 98 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHH
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHH
Confidence 357999999999542 35677777766677899999999999998888877666553
No 35
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.33 E-value=7.9e-07 Score=76.58 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=43.4
Q ss_pred CCCEEEEeCCCCC------------HHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHH
Q 029935 46 KCPVTVCGDIHGQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVA 99 (185)
Q Consensus 46 ~~~i~vigDIHG~------------~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~ 99 (185)
.++++.+||+|-. ...|.++++.+.....|.+|++||++|++..+.+++..+.+
T Consensus 76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHH
T ss_pred CeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHH
Confidence 4689999999964 34577888777667789999999999999988887765443
No 36
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.32 E-value=7.1e-07 Score=75.97 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=43.8
Q ss_pred cCCCEEEEeCCCCC------------HHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHH
Q 029935 45 VKCPVTVCGDIHGQ------------FHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVA 99 (185)
Q Consensus 45 ~~~~i~vigDIHG~------------~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~ 99 (185)
..++++.+||+|-. ...|.++++.+.....|.+|+.||++|++..+.+++..+.+
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHH
Confidence 35799999999965 34577788777667789999999999999988877665443
No 37
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=97.90 E-value=1.2e-05 Score=68.06 Aligned_cols=70 Identities=17% Similarity=0.122 Sum_probs=45.5
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCC--CCCeEEEeccccCCCCC----c---HHHHHHHHHHHHhCCCcEEEEcCCCc
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNA--PDTNYLFMGDYVDRGYY----S---VETVTLLVALKVRYRDRITILRGNHE 116 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~--~~~~lv~lGD~vdrG~~----~---~e~l~~l~~l~~~~p~~v~~l~GNHE 116 (185)
..+++++||+|....... +++.+... ..|.+|++||+++.+.. . .+...++..+.... .++.+.||||
T Consensus 119 ~~~f~~igD~~~~~~~~~-~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~GNHD 195 (424)
T 2qfp_A 119 PYTFGLIGDLGQSFDSNT-TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTAGNHE 195 (424)
T ss_dssp CEEEEEECSCTTBHHHHH-HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECCCHHH
T ss_pred CeEEEEEEeCCCCCChHH-HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeecCCcc
Confidence 458999999998876543 34433322 56899999999986421 1 12233333343334 4999999999
Q ss_pred hh
Q 029935 117 SR 118 (185)
Q Consensus 117 ~~ 118 (185)
..
T Consensus 196 ~~ 197 (424)
T 2qfp_A 196 IE 197 (424)
T ss_dssp HC
T ss_pred cc
Confidence 75
No 38
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=97.90 E-value=2e-06 Score=68.77 Aligned_cols=73 Identities=15% Similarity=0.047 Sum_probs=43.5
Q ss_pred CCCEEEEeCCCCCH---------HHHHHHHHh-cCCCCCCeEEEeccccCC-CC---CcHHHHHHHHHHHH--hC-CCcE
Q 029935 46 KCPVTVCGDIHGQF---------HDLVELFRI-GGNAPDTNYLFMGDYVDR-GY---YSVETVTLLVALKV--RY-RDRI 108 (185)
Q Consensus 46 ~~~i~vigDIHG~~---------~~l~~ll~~-~~~~~~~~lv~lGD~vdr-G~---~~~e~l~~l~~l~~--~~-p~~v 108 (185)
.++++++||+|+.. ..+.+.+.. +.....|.+|++||++.. |. ...+..+.+..+.. .. +..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~ 85 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPW 85 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCE
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCE
Confidence 46899999999863 233333332 333457899999999753 21 12233333322110 12 3469
Q ss_pred EEEcCCCchh
Q 029935 109 TILRGNHESR 118 (185)
Q Consensus 109 ~~l~GNHE~~ 118 (185)
+++.||||..
T Consensus 86 ~~v~GNHD~~ 95 (313)
T 1ute_A 86 HVLAGNHDHL 95 (313)
T ss_dssp EECCCHHHHH
T ss_pred EEECCCCccC
Confidence 9999999984
No 39
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=97.76 E-value=2.4e-05 Score=66.23 Aligned_cols=71 Identities=20% Similarity=0.105 Sum_probs=43.9
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcC-C-CCCCeEEEeccccCCCCC----cHH---HHHHHHHHHHhCCCcEEEEcCCCc
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGG-N-APDTNYLFMGDYVDRGYY----SVE---TVTLLVALKVRYRDRITILRGNHE 116 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~-~-~~~~~lv~lGD~vdrG~~----~~e---~l~~l~~l~~~~p~~v~~l~GNHE 116 (185)
..+++++||+|...... ..++.+. . ...|.+|++||++..+.. ... ..+.+..+.... .++.+.||||
T Consensus 126 ~~~f~~~gD~~~~~~~~-~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~GNHD 202 (426)
T 1xzw_A 126 PYVFGLIGDIGQTHDSN-TTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTAGNHE 202 (426)
T ss_dssp CEEEEEECSCTTBHHHH-HHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCCCGGG
T ss_pred CeEEEEEEeCCCCCchH-HHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEeccccc
Confidence 45899999999875432 2233222 2 256899999999975321 111 223333343334 4999999999
Q ss_pred hhh
Q 029935 117 SRQ 119 (185)
Q Consensus 117 ~~~ 119 (185)
...
T Consensus 203 ~~~ 205 (426)
T 1xzw_A 203 IDY 205 (426)
T ss_dssp CCC
T ss_pred ccc
Confidence 753
No 40
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=97.33 E-value=3.3e-05 Score=64.02 Aligned_cols=72 Identities=10% Similarity=-0.048 Sum_probs=44.3
Q ss_pred CCEEEEeCCCCCHHHHH----HHHHhcCCCCCCeEEEeccccCCCCCcH------HHHHHHHHHH-HhCCCcEEEEcCCC
Q 029935 47 CPVTVCGDIHGQFHDLV----ELFRIGGNAPDTNYLFMGDYVDRGYYSV------ETVTLLVALK-VRYRDRITILRGNH 115 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~----~ll~~~~~~~~~~lv~lGD~vdrG~~~~------e~l~~l~~l~-~~~p~~v~~l~GNH 115 (185)
.++++|||.|.....-. .+.+.+...+.|.+|++||+++.|..+. +.++.+.... ...+-.++.++|||
T Consensus 4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNH 83 (342)
T 3tgh_A 4 LRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTR 83 (342)
T ss_dssp EEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHH
T ss_pred EEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCC
Confidence 47899999997544322 2223333456789999999998887431 2222221110 11223589999999
Q ss_pred chh
Q 029935 116 ESR 118 (185)
Q Consensus 116 E~~ 118 (185)
|..
T Consensus 84 D~~ 86 (342)
T 3tgh_A 84 DWT 86 (342)
T ss_dssp HHT
T ss_pred ccC
Confidence 975
No 41
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=97.13 E-value=0.00018 Score=62.52 Aligned_cols=68 Identities=21% Similarity=0.067 Sum_probs=44.7
Q ss_pred CCCEEEEeCCCCCHH----------HHHHHHHhcCC-----CCCCeEEEeccccCCCCC-----cHHHHHHHHHHHHhCC
Q 029935 46 KCPVTVCGDIHGQFH----------DLVELFRIGGN-----APDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYR 105 (185)
Q Consensus 46 ~~~i~vigDIHG~~~----------~l~~ll~~~~~-----~~~~~lv~lGD~vdrG~~-----~~e~l~~l~~l~~~~p 105 (185)
..+|+.++|+||.+. .+..+++.+.. .+.+.++..||+++..+. ...+++.+..+. +
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---~ 84 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y 84 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---C
Confidence 458999999999743 45556654432 234577889999976542 234566665553 1
Q ss_pred CcEEEEcCCCchh
Q 029935 106 DRITILRGNHESR 118 (185)
Q Consensus 106 ~~v~~l~GNHE~~ 118 (185)
-++..||||..
T Consensus 85 --d~~~~GNHEfd 95 (516)
T 1hp1_A 85 --DAMAIGNHEFD 95 (516)
T ss_dssp --CEEECCGGGGS
T ss_pred --CEEeecccccc
Confidence 36788999973
No 42
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=97.05 E-value=0.00028 Score=61.49 Aligned_cols=68 Identities=18% Similarity=0.154 Sum_probs=44.8
Q ss_pred cCCCEEEEeCCCCCHH----------------HHHHHHHhcCCCCCC-eEEEeccccCCCCCc----------HHHHHHH
Q 029935 45 VKCPVTVCGDIHGQFH----------------DLVELFRIGGNAPDT-NYLFMGDYVDRGYYS----------VETVTLL 97 (185)
Q Consensus 45 ~~~~i~vigDIHG~~~----------------~l~~ll~~~~~~~~~-~lv~lGD~vdrG~~~----------~e~l~~l 97 (185)
...+|+.++|+||++. .+..+++.+.....+ .++..||.++.+|.+ ..+++.+
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~l 97 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFY 97 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHH
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHH
Confidence 3458999999999862 566777665544344 455589999977543 3455555
Q ss_pred HHHHHhCCCcEEEEcCCCch
Q 029935 98 VALKVRYRDRITILRGNHES 117 (185)
Q Consensus 98 ~~l~~~~p~~v~~l~GNHE~ 117 (185)
..+. .. .+..||||.
T Consensus 98 n~lg----~D-~~t~GNHef 112 (527)
T 3qfk_A 98 NRMA----FD-FGTLGNHEF 112 (527)
T ss_dssp HHTC----CC-EECCCGGGG
T ss_pred HhcC----Cc-EEecccccc
Confidence 4443 22 466899994
No 43
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=96.99 E-value=0.0004 Score=55.97 Aligned_cols=69 Identities=14% Similarity=0.074 Sum_probs=44.3
Q ss_pred cCCCEEEEeCCCCCHH--HHHHHHHhcCCC-CCCeEEEeccccCCC-CCcHHHHHHHHHHHHhCCCcEEEEcCCCchh
Q 029935 45 VKCPVTVCGDIHGQFH--DLVELFRIGGNA-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 45 ~~~~i~vigDIHG~~~--~l~~ll~~~~~~-~~~~lv~lGD~vdrG-~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
..|+++++|||||... .+...++.+... +.+.++.-||-.-.| +-+..+.+.+..+. -.+ +-.||||.-
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G----~Da-~TlGNHefD 75 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAG----VNY-ITMGNHTWF 75 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHT----CCE-EECCTTTTC
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcC----CCE-EEEccCccc
Confidence 3589999999998743 233444444322 346777767766444 45677777777765 334 455999964
No 44
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=96.85 E-value=0.00079 Score=59.02 Aligned_cols=68 Identities=21% Similarity=0.252 Sum_probs=45.0
Q ss_pred CCCEEEEeCCCCCH-----------------HHHHHHHHhcCCCCCC-eEEEeccccCCCCC-----cHHHHHHHHHHHH
Q 029935 46 KCPVTVCGDIHGQF-----------------HDLVELFRIGGNAPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKV 102 (185)
Q Consensus 46 ~~~i~vigDIHG~~-----------------~~l~~ll~~~~~~~~~-~lv~lGD~vdrG~~-----~~e~l~~l~~l~~ 102 (185)
..+|+.++|+||++ ..+..+++.+.....+ .++..||+++..+. ...+++.+..+.
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg- 107 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLR- 107 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTT-
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcC-
Confidence 45899999999763 4566677655433334 66779999997653 234455554443
Q ss_pred hCCCcEEEEcCCCchh
Q 029935 103 RYRDRITILRGNHESR 118 (185)
Q Consensus 103 ~~p~~v~~l~GNHE~~ 118 (185)
+ -++..||||..
T Consensus 108 --~--d~~~lGNHEfd 119 (552)
T 2z1a_A 108 --Y--RAMALGNHEFD 119 (552)
T ss_dssp --C--CEEECCGGGGT
T ss_pred --C--Ccccccccccc
Confidence 1 36788999974
No 45
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=96.63 E-value=0.0016 Score=57.07 Aligned_cols=68 Identities=22% Similarity=0.264 Sum_probs=45.2
Q ss_pred CCCEEEEeCCCCCH--------------------HHHHHHHHhcCCC-CCCeEEEeccccCCCCCc-----HHHHHHHHH
Q 029935 46 KCPVTVCGDIHGQF--------------------HDLVELFRIGGNA-PDTNYLFMGDYVDRGYYS-----VETVTLLVA 99 (185)
Q Consensus 46 ~~~i~vigDIHG~~--------------------~~l~~ll~~~~~~-~~~~lv~lGD~vdrG~~~-----~e~l~~l~~ 99 (185)
..+|+.++|+||++ ..+..+++.+... +.+.++..||.++..+.+ ..+++.+..
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~ 104 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 104 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHh
Confidence 34899999999863 4566666655432 345677799999976532 445555555
Q ss_pred HHHhCCCcEEEEcCCCchh
Q 029935 100 LKVRYRDRITILRGNHESR 118 (185)
Q Consensus 100 l~~~~p~~v~~l~GNHE~~ 118 (185)
+. . -++..||||..
T Consensus 105 lg----~-d~~~~GNHEfd 118 (546)
T 4h2g_A 105 LR----Y-DAMALGNHEFD 118 (546)
T ss_dssp HT----C-SEEECCGGGGT
T ss_pred cC----C-cEEeccCcccc
Confidence 53 2 25778999963
No 46
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=96.61 E-value=0.0024 Score=50.61 Aligned_cols=66 Identities=12% Similarity=-0.023 Sum_probs=45.7
Q ss_pred CCEEEEeCCCC--CHHHHHHHHHhcCCCCCCeEEE-eccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCchh
Q 029935 47 CPVTVCGDIHG--QFHDLVELFRIGGNAPDTNYLF-MGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 47 ~~i~vigDIHG--~~~~l~~ll~~~~~~~~~~lv~-lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
||+.++|||=| ....+...++.+.... +.+++ .||....-+.+.+..+.+..+. -.+. -.||||.-
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G----~D~~-T~GNHefD 69 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLDRRSYRLLREAG----VDLV-SLGNHAWD 69 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHT----CCEE-ECCTTTTS
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCC----CCEE-EeccEeeE
Confidence 68999999965 4455677777665544 66666 6676655456677777777765 3454 55999964
No 47
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=96.49 E-value=0.0023 Score=56.42 Aligned_cols=68 Identities=15% Similarity=0.074 Sum_probs=43.9
Q ss_pred CCCEEEEeCCCCCH---------------------HHHHHHHHhcCCC-CCCeEEEeccccCCCC-----CcHHHHHHHH
Q 029935 46 KCPVTVCGDIHGQF---------------------HDLVELFRIGGNA-PDTNYLFMGDYVDRGY-----YSVETVTLLV 98 (185)
Q Consensus 46 ~~~i~vigDIHG~~---------------------~~l~~ll~~~~~~-~~~~lv~lGD~vdrG~-----~~~e~l~~l~ 98 (185)
..+|+.++|+||++ ..+..+++.+... +...++..||.++..+ .....++.+.
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln 91 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMN 91 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHH
Confidence 35899999999874 3455566554432 3346667999998653 2344566665
Q ss_pred HHHHhCCCcEEEEcCCCchh
Q 029935 99 ALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 99 ~l~~~~p~~v~~l~GNHE~~ 118 (185)
.+. . -.+..||||.-
T Consensus 92 ~lg----~-D~~tlGNHEfd 106 (579)
T 3ztv_A 92 AGN----F-HYFTLGNHEFD 106 (579)
T ss_dssp HHT----C-SEEECCSGGGT
T ss_pred hcC----c-Ceeeccccccc
Confidence 554 2 24678999963
No 48
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=96.42 E-value=0.001 Score=57.69 Aligned_cols=66 Identities=18% Similarity=0.404 Sum_probs=40.7
Q ss_pred CCEEEEeCCCCC------------------HHHHHHHHHhcCCCCCCeEEE-eccccCCCCC-----cHHHHHHHHHHHH
Q 029935 47 CPVTVCGDIHGQ------------------FHDLVELFRIGGNAPDTNYLF-MGDYVDRGYY-----SVETVTLLVALKV 102 (185)
Q Consensus 47 ~~i~vigDIHG~------------------~~~l~~ll~~~~~~~~~~lv~-lGD~vdrG~~-----~~e~l~~l~~l~~ 102 (185)
.+|+.++|+||+ +..+..+++.+.....+.+++ .||.++..+. ...+++.+..+.
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~lg- 85 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTMP- 85 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTSC-
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhcC-
Confidence 479999999986 345566666554444455666 9999984311 133444443332
Q ss_pred hCCCcEEEEcCCCch
Q 029935 103 RYRDRITILRGNHES 117 (185)
Q Consensus 103 ~~p~~v~~l~GNHE~ 117 (185)
. -++..||||.
T Consensus 86 ---~-D~~tlGNHEf 96 (509)
T 3ive_A 86 ---F-DAVTIGNHEF 96 (509)
T ss_dssp ---C-SEECCCGGGG
T ss_pred ---C-cEEeeccccc
Confidence 2 3456799995
No 49
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=96.36 E-value=0.0046 Score=49.06 Aligned_cols=66 Identities=15% Similarity=0.024 Sum_probs=44.0
Q ss_pred CCEEEEeCCCCCH--HHHHHHHHhcCCCCCCeEEEeccccCCC-CCcHHHHHHHHHHHHhCCCcEEEEcCCCchh
Q 029935 47 CPVTVCGDIHGQF--HDLVELFRIGGNAPDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 47 ~~i~vigDIHG~~--~~l~~ll~~~~~~~~~~lv~lGD~vdrG-~~~~e~l~~l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
||+.++|||=|.. ..+...++.+.... +.+++-|+-.--| +-+....+.+..+. -.+. -.||||.-
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G----~Da~-TlGNHefD 69 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHRDAARGALEAG----AGCL-TLGNHAWH 69 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHT----CSEE-ECCTTTTS
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCHHHHHHHHhCC----CCEE-Eecccccc
Confidence 6899999997654 45667777665444 7777755544444 56677777777665 3444 44999974
No 50
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=95.87 E-value=0.0033 Score=51.91 Aligned_cols=67 Identities=15% Similarity=0.124 Sum_probs=39.6
Q ss_pred CCEEEEeCCCCCHH----------------HHHHHHHhcCCC-CCCeEEEeccccCCCCCcH-------------HHHHH
Q 029935 47 CPVTVCGDIHGQFH----------------DLVELFRIGGNA-PDTNYLFMGDYVDRGYYSV-------------ETVTL 96 (185)
Q Consensus 47 ~~i~vigDIHG~~~----------------~l~~ll~~~~~~-~~~~lv~lGD~vdrG~~~~-------------e~l~~ 96 (185)
-+|+.++|+||++. .+..+++.+... ++..++..||.+...|.+. .+++.
T Consensus 9 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p~~~~ 88 (339)
T 3jyf_A 9 LRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKA 88 (339)
T ss_dssp EEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHHHHH
T ss_pred EEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchhHHhhhhcccccccchHHHHH
Confidence 37899999999763 345566554433 3335566999996433211 23343
Q ss_pred HHHHHHhCCCcEEEEcCCCchh
Q 029935 97 LVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 97 l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
+..+. .. .+..||||.-
T Consensus 89 mn~lg----~D-~~t~GNHEfd 105 (339)
T 3jyf_A 89 MNTLN----YA-VGNLGNHEFN 105 (339)
T ss_dssp HTTSC----CS-EEECCGGGGT
T ss_pred HHhcC----CC-EEecchhhhh
Confidence 33332 23 4557999964
No 51
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=95.81 E-value=0.0039 Score=51.47 Aligned_cols=68 Identities=22% Similarity=0.278 Sum_probs=40.7
Q ss_pred CCCEEEEeCCCCCH----------------HHHHHHHHhcCCC-CCCeEEEeccccCCCCCcH-----------------
Q 029935 46 KCPVTVCGDIHGQF----------------HDLVELFRIGGNA-PDTNYLFMGDYVDRGYYSV----------------- 91 (185)
Q Consensus 46 ~~~i~vigDIHG~~----------------~~l~~ll~~~~~~-~~~~lv~lGD~vdrG~~~~----------------- 91 (185)
.-+|+.++|+||++ ..+..+++.+... +...++..||.+...|.+.
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~~ 90 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKTH 90 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSCC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHHHHHhhhccccccccccccc
Confidence 34799999999986 3455566554332 3334556999996544221
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCchh
Q 029935 92 ETVTLLVALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 92 e~l~~l~~l~~~~p~~v~~l~GNHE~~ 118 (185)
.+++.+..+. .. .+..||||.-
T Consensus 91 ~~~~~ln~lg----~D-a~tlGNHEfd 112 (341)
T 3gve_A 91 PIISVMNALK----YD-AGTLGNHEFN 112 (341)
T ss_dssp HHHHHHHHTT----CC-BEECCGGGGT
T ss_pred HHHHHHHhhC----CC-eeeccchhhc
Confidence 2344444443 23 3567999964
No 52
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=95.64 E-value=0.0042 Score=54.58 Aligned_cols=70 Identities=17% Similarity=0.157 Sum_probs=40.7
Q ss_pred ecCCCEEEEeCCCCCHH----------------HHHHHHHhcC--CCCCCeEEEeccccCCCC-------CcHHHHHHHH
Q 029935 44 PVKCPVTVCGDIHGQFH----------------DLVELFRIGG--NAPDTNYLFMGDYVDRGY-------YSVETVTLLV 98 (185)
Q Consensus 44 ~~~~~i~vigDIHG~~~----------------~l~~ll~~~~--~~~~~~lv~lGD~vdrG~-------~~~e~l~~l~ 98 (185)
....+|+.++|+||++. .+...++... ..++..++..||.++..+ ....+++.+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 34568999999999742 2333444321 223234577999997543 1223444444
Q ss_pred HHHHhCCCcEEEEcCCCchh
Q 029935 99 ALKVRYRDRITILRGNHESR 118 (185)
Q Consensus 99 ~l~~~~p~~v~~l~GNHE~~ 118 (185)
.+. -. .+..||||..
T Consensus 93 ~lg----~D-a~tlGNHEfD 107 (557)
T 3c9f_A 93 KQD----YD-LLTIGNHELY 107 (557)
T ss_dssp TSC----CS-EECCCGGGSS
T ss_pred hcC----CC-EEeecchhcc
Confidence 443 23 4667999974
No 53
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=94.19 E-value=0.038 Score=47.96 Aligned_cols=66 Identities=21% Similarity=0.283 Sum_probs=41.5
Q ss_pred CEEEEeCCCCCH--------------------HHHHHHHHhcCC-CCCCeEEEeccccCCCCC-----cHHHHHHHHHHH
Q 029935 48 PVTVCGDIHGQF--------------------HDLVELFRIGGN-APDTNYLFMGDYVDRGYY-----SVETVTLLVALK 101 (185)
Q Consensus 48 ~i~vigDIHG~~--------------------~~l~~ll~~~~~-~~~~~lv~lGD~vdrG~~-----~~e~l~~l~~l~ 101 (185)
+|+-+.|+||++ ..+..+++.+.. .++..++..||.+...+. ...+++.+..+.
T Consensus 5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~lg 84 (530)
T 4h1s_A 5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALR 84 (530)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHTT
T ss_pred EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhccC
Confidence 578899999865 345555555433 233455559999986542 234555555543
Q ss_pred HhCCCcEEEEcCCCchh
Q 029935 102 VRYRDRITILRGNHESR 118 (185)
Q Consensus 102 ~~~p~~v~~l~GNHE~~ 118 (185)
-=....||||.-
T Consensus 85 -----yDa~~lGNHEFd 96 (530)
T 4h1s_A 85 -----YDAMALGNHEFD 96 (530)
T ss_dssp -----CCEEECCGGGGT
T ss_pred -----CCEEEEchhhhc
Confidence 135778999974
No 54
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=93.39 E-value=0.047 Score=47.91 Aligned_cols=37 Identities=16% Similarity=-0.047 Sum_probs=24.4
Q ss_pred CeEEEeccccCCCCCc-----HHHHHHHHHHHHhCCCcEEEEcCCCch
Q 029935 75 TNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (185)
Q Consensus 75 ~~lv~lGD~vdrG~~~-----~e~l~~l~~l~~~~p~~v~~l~GNHE~ 117 (185)
..++..||+++..+.+ ..+++.+..+. ..+ ++ ||||.
T Consensus 125 ~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg----~d~-~~-GNHEf 166 (562)
T 2wdc_A 125 ALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG----VDH-MV-SHWEW 166 (562)
T ss_dssp EEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT----CCE-EC-CSGGG
T ss_pred EEEEeCCCCCCcchhhhhhCCHHHHHHHHhhC----CcE-Ee-cchhc
Confidence 3667799999976532 34566665554 234 46 99996
No 55
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=93.39 E-value=0.18 Score=43.87 Aligned_cols=36 Identities=11% Similarity=0.235 Sum_probs=26.5
Q ss_pred CCCEEEEeCCC---CCHHHHHHHHHhcCCCCCCeEEEeccccC
Q 029935 46 KCPVTVCGDIH---GQFHDLVELFRIGGNAPDTNYLFMGDYVD 85 (185)
Q Consensus 46 ~~~i~vigDIH---G~~~~l~~ll~~~~~~~~~~lv~lGD~vd 85 (185)
..+++++||.+ |.+..+..+.+ .+.|.+|++||+|-
T Consensus 116 ~~rfa~~sc~~~~~g~~~~~~~ia~----~~~D~vlhlGD~iY 154 (527)
T 2yeq_A 116 QMTFAFASCQQYEHGYYTAYKHMAK----EKLDLVFHLGDYIY 154 (527)
T ss_dssp CEEEEEECCCCGGGCCCHHHHHHTT----SCCSEEEECSCSSC
T ss_pred CeEEEEEecCCCCCCccHHHHHHHh----cCCCEEEecCCccc
Confidence 45799999987 55665555432 46789999999993
No 56
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=86.77 E-value=2.3 Score=36.51 Aligned_cols=73 Identities=16% Similarity=0.248 Sum_probs=40.0
Q ss_pred cCCCEEEEeCCC--CC----HHHHHHHHHhc-CC----------CCCCeEEEeccccCCCCCcH----------------
Q 029935 45 VKCPVTVCGDIH--GQ----FHDLVELFRIG-GN----------APDTNYLFMGDYVDRGYYSV---------------- 91 (185)
Q Consensus 45 ~~~~i~vigDIH--G~----~~~l~~ll~~~-~~----------~~~~~lv~lGD~vdrG~~~~---------------- 91 (185)
.+..+++|||+| |. ..+++.+.+-+ +. ....++|+.||.++.-....
T Consensus 199 ~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~ 278 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAA 278 (476)
T ss_dssp SCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHH
T ss_pred CCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchh
Confidence 456799999999 22 22333333311 21 12358999999998632211
Q ss_pred --HHHHHHH----HHHHhCCCcEEEEcCCCchhh
Q 029935 92 --ETVTLLV----ALKVRYRDRITILRGNHESRQ 119 (185)
Q Consensus 92 --e~l~~l~----~l~~~~p~~v~~l~GNHE~~~ 119 (185)
+-++.+- ++... -.+.+++||||-..
T Consensus 279 ~~~~~~~ld~~L~~l~~~--i~V~lmPG~~DP~~ 310 (476)
T 3e0j_A 279 SVEAVKMLDEILLQLSAS--VPVDVMPGEFDPTN 310 (476)
T ss_dssp HHHHHHHHHHHHHHHHTT--SCEEEECCTTSSSC
T ss_pred hHHHHHHHHHHHHhcccC--ceEEecCCCCCccc
Confidence 1222222 22212 25899999999853
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=70.60 E-value=13 Score=31.75 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=46.2
Q ss_pred CEEEEeCCCC-----CHHHHHHHHHhcCCC-CCCeEEEeccccCCCC------------------Cc-HHHHHHHHH-HH
Q 029935 48 PVTVCGDIHG-----QFHDLVELFRIGGNA-PDTNYLFMGDYVDRGY------------------YS-VETVTLLVA-LK 101 (185)
Q Consensus 48 ~i~vigDIHG-----~~~~l~~ll~~~~~~-~~~~lv~lGD~vdrG~------------------~~-~e~l~~l~~-l~ 101 (185)
+++|.+.-+- +|+.|..+++.+... +.+.+|++|.++|.-- .+ .++++.+.. ..
T Consensus 149 ~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~~il 228 (460)
T 3flo_A 149 KVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPIL 228 (460)
T ss_dssp EEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHH
T ss_pred EEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHHHHH
Confidence 5666666553 577889999988764 6889999999998641 11 123333221 11
Q ss_pred Hh--CCCcEEEEcCCCchh
Q 029935 102 VR--YRDRITILRGNHESR 118 (185)
Q Consensus 102 ~~--~p~~v~~l~GNHE~~ 118 (185)
.+ ..-++++++|+||..
T Consensus 229 ~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 229 KTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp TTSCTTSEEEEECCTTBTT
T ss_pred HhccCCCEEEEeCCccccc
Confidence 11 113789999999985
No 58
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=53.84 E-value=23 Score=22.54 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHcC--CCCCHHHHHHH-------HHHHHHhhcccCcceecCCCEEEEeCC
Q 029935 4 QADLDRQIEHLMQC--KPLPEQEVNIL-------CEQARAILVEEWNVQPVKCPVTVCGDI 55 (185)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~~~~l-------~~~~~~~l~~~~~~~~~~~~i~vigDI 55 (185)
|+..++.+.++++. .++...++.+. ++++...|+++.-+.++....+.+|+-
T Consensus 17 ~~d~eekVLe~LkeaG~PlkageIae~~GvdKKeVdKaik~LKkEgkI~SPkRCyw~~~~~ 77 (80)
T 2lnb_A 17 EGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTSPATWCLGGT 77 (80)
T ss_dssp HHHHHHHHHHHHHHHTSCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEETTEEEESSS
T ss_pred cchHHHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHcCCccCCCCceeeCCCC
Confidence 45555555555544 67777777655 577888899999999888888988863
No 59
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=51.18 E-value=11 Score=30.47 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=41.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeC-CC-CCHHHHHHHHHhcCCCCCCeEE
Q 029935 1 MPSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGD-IH-GQFHDLVELFRIGGNAPDTNYL 78 (185)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigD-IH-G~~~~l~~ll~~~~~~~~~~lv 78 (185)
|-+++-++.+.+.-.--..-.++++..+++ .+.+.++.--.| -|+ +| |++-.+..+.... ..+.+.++
T Consensus 1 ~~~~~~~~~l~~Rg~~~~~~~~~~l~~~l~------~~~~~vy~G~~P---Tg~slHlGh~l~l~~~~~lQ-~~g~~~~~ 70 (322)
T 2yxn_A 1 MASSNLIKQLQERGLVAQVTDEEALAERLA------QGPIALVCGFDP---TADSLHLGHLVPLLCLKRFQ-QAGHKPVA 70 (322)
T ss_dssp CCCCSHHHHHHHTTCCSEESSHHHHHHHHH------HSCCEEEEEECC---SSSSCBHHHHHHHHHHHHHH-HTTCEEEE
T ss_pred CchhHHHHHHHHCCceeeeCCHHHHHHHHc------CCCCEEEEeecC---CCCcccHHHHHHHHHHHHHH-HcCCcEEE
Confidence 556666666666554444455777776665 122223222122 266 88 7777665544322 22356788
Q ss_pred EeccccC
Q 029935 79 FMGDYVD 85 (185)
Q Consensus 79 ~lGD~vd 85 (185)
++||+-.
T Consensus 71 ~i~D~~a 77 (322)
T 2yxn_A 71 LVGGATG 77 (322)
T ss_dssp EECTTGG
T ss_pred EEcccee
Confidence 8999664
No 60
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis}
Probab=49.93 E-value=9.4 Score=32.26 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=41.1
Q ss_pred CChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEe-CCC-CCHHHHHHHHHhcCCCCCCeEEE
Q 029935 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCG-DIH-GQFHDLVELFRIGGNAPDTNYLF 79 (185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vig-DIH-G~~~~l~~ll~~~~~~~~~~lv~ 79 (185)
|||+-++++.+.-.--+..+++++..+++. ..+.++.--.| -| ++| |++-.+..+.... ..+...+++
T Consensus 1 ~~~~~~~~L~~RG~~~~~~~~e~L~~~L~~------~~~~iy~G~dP---Tg~sLHLGhlv~l~~l~~lQ-~~G~~~i~l 70 (432)
T 2jan_A 1 MSGMILDELSWRGLIAQSTDLDTLAAEAQR------GPMTVYAGFDP---TAPSLHAGHLVPLLTLRRFQ-RAGHRPIVL 70 (432)
T ss_dssp ----CHHHHHHHTCCSEESCHHHHHHHHHH------SCCEEEEEECC---SSSSCBGGGHHHHHHHHHHH-HTTCEEEEE
T ss_pred CchHHHHHHHHcCchhhcCCHHHHHHHHcC------CCCEEEEeeCC---CCCCcCHHHHHHHHHHHHHH-HCCCcEEEE
Confidence 356667777777666666778888877751 11222211112 36 488 8877776654322 223567888
Q ss_pred ecccc
Q 029935 80 MGDYV 84 (185)
Q Consensus 80 lGD~v 84 (185)
+||+-
T Consensus 71 IgD~t 75 (432)
T 2jan_A 71 AGGAT 75 (432)
T ss_dssp ECHHH
T ss_pred EcCcE
Confidence 99954
No 61
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix}
Probab=47.50 E-value=15 Score=30.09 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=37.6
Q ss_pred CCChhHHHHHHHHHHcC--CCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCeE
Q 029935 1 MPSQADLDRQIEHLMQC--KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNY 77 (185)
Q Consensus 1 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH-G~~~~l~~ll~~~~~~~~~~l 77 (185)
|..| ++++-++-+.++ +.++++++..++++ ...+.++.--.| -|.+| |++-++..+..... .+.+.+
T Consensus 1 ~~~~-~~~~~~~l~~r~~~e~~~~~~L~~~l~~-----~~~~~iy~G~~P---Tg~lHlG~l~~l~~~~~lQ~-~G~~~~ 70 (364)
T 2cya_A 1 MVRV-DVEERFNRIARNTVEIVTEEELKGLLAS-----GARIKGYIGYEP---SGVAHIGWLVWMYKVKDLVE-AGVDFS 70 (364)
T ss_dssp ---C-HHHHHHHHHHTTCSEEETHHHHHHHHHH-----CSCCEEEEEECC---CSSCBTHHHHHHHHHHHHHH-TTCEEE
T ss_pred CCCC-CHHHHHHHHHcCchhcCCHHHHHHHHhc-----CCCCEEEeccCC---CCCccHhHHHHHHHHHHHHH-CCCCEE
Confidence 4555 233333333333 35678888777743 112233322223 36788 77666665544322 235678
Q ss_pred EEecccc
Q 029935 78 LFMGDYV 84 (185)
Q Consensus 78 v~lGD~v 84 (185)
+++||+-
T Consensus 71 ~~iaD~~ 77 (364)
T 2cya_A 71 VLEATWH 77 (364)
T ss_dssp EEECHHH
T ss_pred EEEeCcc
Confidence 8899943
No 62
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=47.35 E-value=13 Score=31.14 Aligned_cols=73 Identities=15% Similarity=0.147 Sum_probs=43.0
Q ss_pred CChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCc-ceecCCCEEEEeC-CC-CCHHHHHHHHHhcCCCCCCeEE
Q 029935 2 PSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWN-VQPVKCPVTVCGD-IH-GQFHDLVELFRIGGNAPDTNYL 78 (185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~i~vigD-IH-G~~~~l~~ll~~~~~~~~~~lv 78 (185)
|||+-++++.+.-.--+..+++++..+++ .+|. ++.--.| -|+ +| |++-.+..+.... ..+...++
T Consensus 1 ~~~~~~~~l~~Rg~~~~~~~~~~L~~~L~-------~~~~~iy~G~dP---Tg~sLHlGh~v~l~~~~~lQ-~~G~~~~~ 69 (420)
T 1jil_A 1 MTNVLIEDLKWRGLIYQQTDEQGIEDLLN-------KEQVTLYCGADP---TADSLHIGHLLPFLTLRRFQ-EHGHRPIV 69 (420)
T ss_dssp -CCHHHHHHHHTTCCCCBSCHHHHHHHHH-------HSCCEEEEEECC---SSSSCBHHHHHHHHHHHHHH-HTTCEEEE
T ss_pred CchHHHHHHHHcCchhhcCCHHHHHHHHc-------CCCCEEEEeeCC---CCCCccHHHHHHHHHHHHHH-HCCCcEEE
Confidence 35677777777766666677888888873 2222 2211111 245 88 7777665543322 22356788
Q ss_pred EeccccC
Q 029935 79 FMGDYVD 85 (185)
Q Consensus 79 ~lGD~vd 85 (185)
++||+-.
T Consensus 70 lIgd~ta 76 (420)
T 1jil_A 70 LIGGGTG 76 (420)
T ss_dssp EECTTGG
T ss_pred EEcCcee
Confidence 8999764
No 63
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae}
Probab=45.25 E-value=12 Score=31.14 Aligned_cols=67 Identities=16% Similarity=0.148 Sum_probs=38.8
Q ss_pred HHHHHHHHHcC--CCCCHHHHHHHHHHHHHhhcccC-cceecCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCeEEEecc
Q 029935 7 LDRQIEHLMQC--KPLPEQEVNILCEQARAILVEEW-NVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNYLFMGD 82 (185)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~i~vigDIH-G~~~~l~~ll~~~~~~~~~~lv~lGD 82 (185)
+++-++-+.++ +.++++++..++++ ...| .++.--.| -|++| |++-.+........ ...+.++++||
T Consensus 9 ~~~~~~l~~rg~~e~~~~e~L~~~L~~-----~~~p~~vy~G~~P---TG~LHlG~~~~al~~~~~~q-~g~~~ii~I~D 79 (394)
T 2dlc_X 9 PNEAFGLITKNLQEVLNPQIIKDVLEV-----QKRHLKLYWGTAP---TGRPHCGYFVPMTKLADFLK-AGCEVTVLLAD 79 (394)
T ss_dssp HHHHHHHHHTTCSEEECHHHHHHHHHT-----SCSCCEEEEEECC---CSCCBGGGHHHHHHHHHHHH-TTCEEEEEECH
T ss_pred HHHHHHHHHcCcceecCHHHHHHHHHc-----cCCCeEEEEEeCC---CCCccHHHHHHHHHHHHHHH-cCCcEEEEEcC
Confidence 33444444444 35678888887764 2344 34433334 58999 88766654443332 24567888999
No 64
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A*
Probab=39.91 E-value=19 Score=29.64 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCC--CCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCeEEEecc
Q 029935 7 LDRQIEHLMQCK--PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNYLFMGD 82 (185)
Q Consensus 7 ~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH-G~~~~l~~ll~~~~~~~~~~lv~lGD 82 (185)
+++-++-+.++. .++++++..++++ ..+.++.--.| -|++| |++-.+..+..... .+.+.++++||
T Consensus 7 ~~~~~~l~~Rg~~e~~~~~~L~~~L~~------~~~~vy~G~~P---TG~lHlG~~~~~l~~~~~~q-~g~~~i~~I~D 75 (372)
T 1n3l_A 7 PEEKLHLITRNLQEVLGEEKLKEILKE------RELKIYWGTAT---TGKPHVAYFVPMSKIADFLK-AGCEVTILFAD 75 (372)
T ss_dssp HHHHHHHHHTTCSEEECHHHHHHHHTT------SCCEEEEEECC---SSCCBGGGHHHHHHHHHHHH-TTCEEEEEECH
T ss_pred HHHHHHHHHcCCeeecCHHHHHHHHhc------CCCEEEeCcCC---CCcccHHHHHHHHHHHHHHH-CCCCEEEEEcC
Confidence 344444445553 5788888888763 23334332223 37899 88766655443222 24567888999
No 65
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=38.69 E-value=98 Score=22.07 Aligned_cols=67 Identities=10% Similarity=0.045 Sum_probs=40.6
Q ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCc
Q 029935 47 CPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE 116 (185)
.++++++. +.......+++..+....-..++.+|.+..+....+.+..+.+.-...|..++++ |...
T Consensus 121 ~~~~i~s~--~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~v-GD~~ 187 (237)
T 4ex6_A 121 FRLAMATS--KVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVI-GDGV 187 (237)
T ss_dssp EEEEEECS--SCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE-ESSH
T ss_pred CcEEEEcC--CChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEE-cCCH
Confidence 46788876 4556667777776655444567778877766655555555554333344455444 6554
No 66
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=38.29 E-value=87 Score=28.61 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcc--eecCCCEEEEeCCCCCHHHHHHHHHhcCCCC----CCeE
Q 029935 4 QADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNV--QPVKCPVTVCGDIHGQFHDLVELFRIGGNAP----DTNY 77 (185)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~--~~~~~~i~vigDIHG~~~~l~~ll~~~~~~~----~~~l 77 (185)
|.++++-++.+.-+--+=.-.+-.+.+...+........ ......++|+| ++....+..+++.+-... ...+
T Consensus 9 ~~~~~~~~~~IlgGI~lFa~~ig~liel~~~r~~~~G~y~~~~~k~HIIIcG--~~~~~~v~~fL~El~~~~~~~~~~~I 86 (798)
T 3naf_A 9 MKQIEDKLEEILSKLYHIENELARIKKLLGERKKYGGSYSAVSGRKHIVVCG--HITLESVSNFLKDFLHKDRDDVNVEI 86 (798)
T ss_dssp ---------------------------------CCCSSCCCCCSSEEEEEES--CCCHHHHHHHHHHHTCTTSCCCCEEE
T ss_pred HHHhhhhheehhHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCeEEEEc--CCCHHHHHHHHHHHHhhcccccCCcE
Confidence 566777777776664332222222222222211122222 23456799999 777888777776543222 2367
Q ss_pred EEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCC
Q 029935 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (185)
Q Consensus 78 v~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNH 115 (185)
|++.+- +.+.++-..+. .+..++.++.|+-
T Consensus 87 VIL~~~----~p~~eLe~lL~----~~~~~V~fI~Gda 116 (798)
T 3naf_A 87 VFLHNI----SPNLELEALFK----RHFTQVEFYQGSV 116 (798)
T ss_dssp EEEESS----CCCHHHHHHHH----HTTTTEEEEECCS
T ss_pred EEEeCC----CCcHHHHHHhh----cccCceEEEEcCC
Confidence 777763 33344333222 2346788899884
No 67
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=37.96 E-value=10 Score=30.06 Aligned_cols=37 Identities=22% Similarity=0.398 Sum_probs=24.2
Q ss_pred CeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEc
Q 029935 75 TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILR 112 (185)
Q Consensus 75 ~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~ 112 (185)
-+++|+||++++ |.-..+-..+.+++.+++.+++++-
T Consensus 5 m~ilf~GDv~G~-~G~~~l~~~l~~lr~~~~~d~vi~N 41 (281)
T 1t71_A 5 IKFIFLGDVYGK-AGRNIIKNNLAQLKSKYQADLVIVN 41 (281)
T ss_dssp CEEEEECEEBHH-HHHHHHHTTHHHHHHHHTCSEEEEE
T ss_pred EEEEEECCcCCh-HHHHHHHHHHHHHHHhcCCCEEEEc
Confidence 478999999977 3333445567777766544555553
No 68
>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}
Probab=37.59 E-value=19 Score=28.63 Aligned_cols=39 Identities=23% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCc
Q 029935 1 MPSQADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWN 41 (185)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 41 (185)
|.+|++..+++..++.+ -|+.|+..++.+.+.++.+++.
T Consensus 1 m~~~~ek~~i~~~fl~~--aPPGE~~eV~~Dlr~l~~~d~~ 39 (281)
T 4akr_A 1 MASNQELVQIATNFLLN--APPCEFMEVVSDVRALLPSESL 39 (281)
T ss_dssp -CCHHHHHHHHHHHHHT--CCTTCHHHHHHHHHTTCSCTTT
T ss_pred CCchHHHHHHHHHHHHc--CCCchHHHHHHHHHHHhCCchh
Confidence 88999988999998887 7899999999999888866433
No 69
>3k6h_A Nitroreductase family protein; APC5990, agrobacterium tumefaciens ST structural genomics, PSI-2, protein structure initiative; HET: FMN; 3.05A {Agrobacterium tumefaciens str}
Probab=37.56 E-value=54 Score=23.68 Aligned_cols=60 Identities=18% Similarity=0.056 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHH------HHcCCCCC-HHHHHHHHHHHHHhhcccCcce-ecCCCEEEEeCCCCCHHHHHHHH
Q 029935 1 MPSQADLDRQIEH------LMQCKPLP-EQEVNILCEQARAILVEEWNVQ-PVKCPVTVCGDIHGQFHDLVELF 66 (185)
Q Consensus 1 ~~~~~~~~~~~~~------~~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~-~~~~~i~vigDIHG~~~~l~~ll 66 (185)
|++|.++.++++. -..+++++ .+++..+++.+. .-|+-. ...-+++||.|= . ...|..++
T Consensus 5 m~~m~~~~~~i~~RrSvR~~f~~~~v~~~e~l~~il~aa~----~APS~~n~Qpw~f~vv~~~-~-~~~l~~~~ 72 (197)
T 3k6h_A 5 MTSDIKLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAV----RVPDHGKLAPWRFVVYRGE-E-RVRLSEAA 72 (197)
T ss_dssp -CCCCBHHHHHTTCCCCCSTTCBSCCCCHHHHHHHHHHHT----CSCCTTSCCCEEEEEEETH-H-HHHHHHHH
T ss_pred ccccHHHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHH----hCcCcCCCcCeEEEEEcch-H-HHHHHHHH
Confidence 6667666666643 11245676 899999998874 223322 233478888874 2 45555443
No 70
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=37.09 E-value=24 Score=27.63 Aligned_cols=77 Identities=19% Similarity=0.176 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHhhccc-CcceecCCCEEEEeCCCCCHHHHHHHHHhc----CCCCCCeEEEeccccCCCCCcHHHH
Q 029935 20 LPEQEVNILCEQARAILVEE-WNVQPVKCPVTVCGDIHGQFHDLVELFRIG----GNAPDTNYLFMGDYVDRGYYSVETV 94 (185)
Q Consensus 20 ~~~~~~~~l~~~~~~~l~~~-~~~~~~~~~i~vigDIHG~~~~l~~ll~~~----~~~~~~~lv~lGD~vdrG~~~~e~l 94 (185)
=|++||..|++-..+.+..+ +.+.....++-+|||+..=-..+.+.++.+ .....-.+.+.=.|-+| -|++
T Consensus 84 Rp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~i~~ae~~T~~n~~~~lnia~~YggR----~EI~ 159 (256)
T 4h8e_A 84 RPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGR----AELV 159 (256)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHHTTTCCSCEEEEEEEECHH----HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEecCcccCCHHHHHHHHHHHHHhcCCCCeEEEEEeCCCCH----HHHH
Confidence 46899998888888877766 345566789999999998666666665432 22233356666666444 3444
Q ss_pred HHHHHH
Q 029935 95 TLLVAL 100 (185)
Q Consensus 95 ~~l~~l 100 (185)
+.+.++
T Consensus 160 ~Avr~i 165 (256)
T 4h8e_A 160 HSIKNM 165 (256)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
No 71
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=34.00 E-value=28 Score=26.71 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHHhhcccCc-ceecCCCEEEEeCCCCCHHHHHHHHHhcC----CCCCCeEEEeccccCCCCCcHHHH
Q 029935 20 LPEQEVNILCEQARAILVEEWN-VQPVKCPVTVCGDIHGQFHDLVELFRIGG----NAPDTNYLFMGDYVDRGYYSVETV 94 (185)
Q Consensus 20 ~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~i~vigDIHG~~~~l~~ll~~~~----~~~~~~lv~lGD~vdrG~~~~e~l 94 (185)
=|++||..|++-..+.+.++.. +.....++-+|||+..=-..+.+.++.+. ....-.+.+.=.|-.| -|++
T Consensus 66 Rp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~~~i~~ae~~T~~n~~~~lnia~~YggR----~EI~ 141 (225)
T 3ugs_B 66 RPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGAR----DEII 141 (225)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEESCGGGSCHHHHHHHHHHHHHHTTCCSEEEEEEEEECHH----HHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEeChHhCCHHHHHHHHHHHHHhcCCCCcEEEEeeCCCCH----HHHH
Confidence 3689999998888888876533 33456699999999986666666654332 2223355556556433 4555
Q ss_pred HHHHHH
Q 029935 95 TLLVAL 100 (185)
Q Consensus 95 ~~l~~l 100 (185)
+.+.++
T Consensus 142 ~A~~~i 147 (225)
T 3ugs_B 142 RAAKRV 147 (225)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 72
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii}
Probab=33.81 E-value=43 Score=27.55 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=36.9
Q ss_pred HHHHHcC---CCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCC-CC-HHHHHHHHHhcCCCCCCeEEEecccc
Q 029935 11 IEHLMQC---KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH-GQ-FHDLVELFRIGGNAPDTNYLFMGDYV 84 (185)
Q Consensus 11 ~~~~~~~---~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH-G~-~~~l~~ll~~~~~~~~~~lv~lGD~v 84 (185)
++-+.++ +.++++++..++++ ...+.++.--.|. |.+| |+ +-.+..+..... .+.+.++++||+-
T Consensus 7 ~~l~~r~~~~e~~~~~~l~~~l~~-----~~~~~vy~G~~PT---g~lHlG~yl~~l~~~~~lQ~-~G~~~~~~iaD~h 76 (375)
T 2cyc_A 7 INLVLKKPTEEVLTVENLRHLFEI-----GAPLQHYIGFEIS---GYIHLGTGLMAGAKIADFQK-AGIKTRVFLADWH 76 (375)
T ss_dssp HHHHHSTTEEEEETHHHHHHHHHH-----TCCCBEEEEECCC---SCCBHHHHHHHHHHHHHHHH-TTCBCEEEECHHH
T ss_pred HHHHhcCCceeecCHHHHHHHHhc-----CCCcEEEeCCCCC---CCcCchHHHHHHHHHHHHHH-CCCcEEEEecCcE
Confidence 3444444 67788888887754 1123333322233 6788 77 666655543322 2456889999943
No 73
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=32.29 E-value=65 Score=20.02 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=19.3
Q ss_pred ChhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHh
Q 029935 3 SQADLDRQIEHLMQCKPLPEQEVNILCEQARAI 35 (185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 35 (185)
|.+++++++++.... ++.+|+..+..+|-.-
T Consensus 20 s~eTLEkv~e~~~y~--Lt~~el~~f~~AaDHR 50 (72)
T 1jw2_A 20 TIDTLERVIEKNKYE--LSDNELAVFYSAADHR 50 (72)
T ss_dssp CHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHH
Confidence 456677777665554 7777777766655433
No 74
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=32.09 E-value=53 Score=25.05 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=26.8
Q ss_pred CCeEEEeccccCCC----------CCcHHHHHHHHHHHHhCCCcEEEEcCCCc
Q 029935 74 DTNYLFMGDYVDRG----------YYSVETVTLLVALKVRYRDRITILRGNHE 116 (185)
Q Consensus 74 ~~~lv~lGD~vdrG----------~~~~e~l~~l~~l~~~~p~~v~~l~GNHE 116 (185)
.+.++|.||.+-.+ .+..+.++-+.++....|+...+++|--+
T Consensus 200 ~~~vLfsGD~l~~~~~~~~~~~~~~~~~~~~~Sl~~l~~~~~d~~~v~PGHG~ 252 (270)
T 4eyb_A 200 GTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSA 252 (270)
T ss_dssp TSSEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSC
T ss_pred CCcEEEEeCeecCCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCcEEEcCCCC
Confidence 45789999987322 12234455556666666766678888543
No 75
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus}
Probab=32.07 E-value=20 Score=29.28 Aligned_cols=70 Identities=11% Similarity=0.185 Sum_probs=39.4
Q ss_pred HHHHHHHHHcC--CCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCC-CC-HHHHHHHHHhcCCCCCCeEEEecc
Q 029935 7 LDRQIEHLMQC--KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH-GQ-FHDLVELFRIGGNAPDTNYLFMGD 82 (185)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH-G~-~~~l~~ll~~~~~~~~~~lv~lGD 82 (185)
+++-++-+.++ +.++++++..++++ ...+.++.--.|. |++| |+ +-.+..+..... .+...++++||
T Consensus 11 ~~~~~~l~~r~~~e~~~~~~L~~~L~~-----~~~~~vy~G~~PT---g~lHlGhyl~~l~~~~~lQ~-~G~~~~~~i~D 81 (348)
T 2j5b_A 11 NEHRLTQLLSIAEECETLDRLKQLVDS-----GRIFTAYNGFEPS---GRIHIAQALITVMNTNNMIE-CGGQMIIYIAD 81 (348)
T ss_dssp HHHHHHHHHTTCSEESCHHHHHHHHHH-----TCCEEEEEEECCC---SSCBHHHHHHHHHHHHHHHH-TTEEEEEEECH
T ss_pred HHHHHHHHHcCcccccCHHHHHHHHhc-----CCCCEEEeccCCC---CCCchhHHHHHHHHHHHHHH-cCCcEEEEecc
Confidence 34444444444 35788998888876 2233333333343 7899 66 455555443221 23467888999
Q ss_pred ccC
Q 029935 83 YVD 85 (185)
Q Consensus 83 ~vd 85 (185)
+-.
T Consensus 82 ~~a 84 (348)
T 2j5b_A 82 WFA 84 (348)
T ss_dssp HHH
T ss_pred chh
Confidence 553
No 76
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=29.54 E-value=45 Score=27.91 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeC-CC-CCHHHHHHHHHhcCCCCCCeEEEecc
Q 029935 5 ADLDRQIEHLMQCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGD-IH-GQFHDLVELFRIGGNAPDTNYLFMGD 82 (185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigD-IH-G~~~~l~~ll~~~~~~~~~~lv~lGD 82 (185)
+-++++.+.-.--+..+++++..+++. ..+.++.--.| -|+ +| |++-.+..+... ...+...++++||
T Consensus 2 ~~~~~L~~Rg~~~~~~~~~~L~~~L~~------~~~~iy~G~dP---Tg~sLHlGh~v~l~~l~~l-Q~~G~~~i~lIgd 71 (419)
T 2ts1_A 2 DLLAELQWRGLVNQTTDEDGLRKLLNE------ERVTLYCGFDP---TADSLHIGHLATILTMRRF-QQAGHRPIALVGG 71 (419)
T ss_dssp HHHHHHHHHTCCSEESCHHHHHHHHHH------SCCEEEEEECC---SSSSCBGGGHHHHHHHHHH-HHTTCEEEEEECT
T ss_pred hHHHHHHHcCchhhcCCHHHHHHHHcC------CCCEEEEeeCC---CCCCccHHHHHHHHHHHHH-HHCCCcEEEEEcC
Confidence 345666665555456678888877751 11222211111 256 88 888776655432 2223567888999
Q ss_pred ccC
Q 029935 83 YVD 85 (185)
Q Consensus 83 ~vd 85 (185)
+-.
T Consensus 72 ~ta 74 (419)
T 2ts1_A 72 ATG 74 (419)
T ss_dssp TGG
T ss_pred cee
Confidence 764
No 77
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus}
Probab=29.13 E-value=20 Score=28.75 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=30.3
Q ss_pred CCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCeEEEeccc
Q 029935 19 PLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNYLFMGDY 83 (185)
Q Consensus 19 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH-G~~~~l~~ll~~~~~~~~~~lv~lGD~ 83 (185)
+++++++..++++ .+.+.++.--.|. |.+| |++-++..+..... .+.+.++++||+
T Consensus 17 ~~~~~~l~~~l~~-----~~~~~vy~G~~PT---g~lHlG~l~~l~~~~~lq~-~g~~~~~~i~D~ 73 (323)
T 2cyb_A 17 VVTEEELRQLIET-----KEKPRAYVGYEPS---GEIHLGHMMTVQKLMDLQE-AGFEIIVLLADI 73 (323)
T ss_dssp EETHHHHHHHHHS-----CSCCEEEEEECCC---SCCBHHHHHHHHHHHHHHH-TTCEEEEEECHH
T ss_pred hcCHHHHHHHHhC-----CCCCEEEECcCCC---CcchHHHHHHHHHHHHHHH-CCCcEEEEECCc
Confidence 5778888777743 1122232221222 5677 65666555443221 235678889995
No 78
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=28.33 E-value=1.7e+02 Score=21.04 Aligned_cols=67 Identities=7% Similarity=-0.057 Sum_probs=39.8
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCC
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNH 115 (185)
..++++++. +........++..+....-..++.+|.+..+....+.+..+.+.....|..++++ |..
T Consensus 110 g~~~~i~t~--~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i-GD~ 176 (241)
T 2hoq_A 110 GYELGIITD--GNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV-GDR 176 (241)
T ss_dssp TCEEEEEEC--SCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE-ESC
T ss_pred CCEEEEEEC--CCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE-CCC
Confidence 457888886 5555566777777654433456667767666555566655544332345555555 554
No 79
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=27.39 E-value=88 Score=19.70 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=22.4
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcc
Q 029935 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (185)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 38 (185)
..++++.+....-++..++..+++...+.+..
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~ 34 (90)
T 2o97_B 3 KSQLIDKIAAGADISKAAAGRALDAIIASVTE 34 (90)
T ss_dssp HHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 56777888777778988888777766655533
No 80
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=27.33 E-value=79 Score=19.91 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=22.6
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcc
Q 029935 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (185)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 38 (185)
.+++++.+.....++..++..+++...+.+..
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~ 34 (90)
T 1mul_A 3 KTQLIDVIAEKAELSKTQAKAALESTLAAITE 34 (90)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 56677777777778988888777766655443
No 81
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=25.69 E-value=88 Score=17.00 Aligned_cols=29 Identities=21% Similarity=0.234 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcc
Q 029935 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (185)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 38 (185)
++++++++++ ++--|+..|++...+.|--
T Consensus 3 ~~~iie~i~~---lTvlE~~eLvk~leekfGV 31 (40)
T 1dd4_C 3 IDEIIEAIEK---LTVSELAELVKKLEDKFGV 31 (40)
T ss_dssp HHHHHHHHTT---SCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHh---CcHHHHHHHHHHHHHHHCC
Confidence 7889999988 8888888888776666543
No 82
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A*
Probab=25.65 E-value=19 Score=28.93 Aligned_cols=57 Identities=18% Similarity=0.295 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCeEEEecccc
Q 029935 18 KPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIH-GQFHDLVELFRIGGNAPDTNYLFMGDYV 84 (185)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIH-G~~~~l~~ll~~~~~~~~~~lv~lGD~v 84 (185)
+..+++++..+++ .+.+.++.--.| -|.+| |++-++..+..... .+.+.++++||.-
T Consensus 13 e~~~~~~l~~~L~------~~~~~vy~G~~P---Tg~lHlGhl~~l~~~~~lQ~-~g~~~~~~i~D~~ 70 (314)
T 2zp1_A 13 EIISEEELREVLK------KDEKSAYIGFEP---SGKIHLGHYLQIKKMIDLQN-AGFDIIILLADLA 70 (314)
T ss_dssp EEETHHHHHHHHT------SSSEEEEEEECC---CSSCBHHHHHHHHHHHHHHH-TTEEEEEEECHHH
T ss_pred ecCCHHHHHHHHc------CCCCEEEEccCC---CCCcchhhHHHHHHHHHHHH-CCCCEEEEEecce
Confidence 3567888877776 223334333333 36788 77666665544322 1345788899954
No 83
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=23.70 E-value=1.3e+02 Score=21.77 Aligned_cols=58 Identities=12% Similarity=0.065 Sum_probs=32.2
Q ss_pred CChhHHHHHHHHH-H-cCCCCCHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCH
Q 029935 2 PSQADLDRQIEHL-M-QCKPLPEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQF 59 (185)
Q Consensus 2 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~ 59 (185)
++..++-...... . ..+.++++++..-|+.-...-...-.+.....+++|++..|.+.
T Consensus 40 I~L~dl~~~~nra~R~g~~lISp~Dl~~A~~~l~~Lg~~~~~l~~~~sg~~V~~~~~~d~ 99 (169)
T 1u5t_B 40 ITLVDLYAMYNKSMRIGTGLISPMEMREACERFEHLGLNELKLVKVNKRILCVTSEKFDV 99 (169)
T ss_dssp EETTHHHHHHHHTTTSSSCCCCHHHHHHHHTTTGGGTCCSCEEEEETTTEEEEESSCSHH
T ss_pred EEHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHhcCCCeEEEEEECCeeEEEeCCChhH
Confidence 3444444444443 3 34689999976655443321111134556567777778888764
No 84
>2fi2_A Zinc finger protein 42; SCAN domain, ZNF-42, MZF-1, homodimer, transcription factor, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.28.3.2
Probab=23.44 E-value=89 Score=20.48 Aligned_cols=25 Identities=12% Similarity=0.101 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHcCCCCCHHHHHHHH
Q 029935 5 ADLDRQIEHLMQCKPLPEQEVNILC 29 (185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~ 29 (185)
+.+.+++.++++++.-+.++++.++
T Consensus 29 ~rLreLc~qWLrPe~hTKEQIlElL 53 (94)
T 2fi2_A 29 AQLRELCRQWLRPEVRSKEQMLELL 53 (94)
T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHCCcccccHHHHHHHH
Confidence 5688999999999999999998766
No 85
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=23.09 E-value=2.2e+02 Score=25.65 Aligned_cols=58 Identities=14% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCEEEEeCCCCCHHHHHHHHHh----cCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCC
Q 029935 47 CPVTVCGDIHGQFHDLVELFRI----GGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGN 114 (185)
Q Consensus 47 ~~i~vigDIHG~~~~l~~ll~~----~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GN 114 (185)
..|+|+| |++.+.+...++. -.......+|++.+- +-+.++-..+.. +..++.++.|+
T Consensus 4 ~HIIVcG--~~~~~sV~~FL~Ef~h~d~~~~~~~VVIL~~~----~P~~ELe~lL~~----~~~~V~fI~Gd 65 (726)
T 3mt5_A 4 KHIVVCG--HITLESVSNFLKDFLHKDRDDVNVEIVFLHNI----SPNLELEALFKR----HFTQVEFYQGS 65 (726)
T ss_dssp CEEEEEE--SCCHHHHHHHHHHHHHHCTTTTTCEEEEECSS----CCCHHHHTTHHH----HCSSEEEECCC
T ss_pred CEEEEEC--CCcHHHHHHHHHHHHhccccccCCcEEEEeCC----CCCHHHHHHHHh----hcCceEEEEeC
Confidence 3578888 6677776554432 111223367878762 122333333322 23567788887
No 86
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=23.02 E-value=77 Score=19.94 Aligned_cols=32 Identities=9% Similarity=0.207 Sum_probs=21.6
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcc
Q 029935 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (185)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 38 (185)
.+++++.+.....++..++..+++...+.+..
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~ 34 (90)
T 1b8z_A 3 KKELIDRVAKKAGAKKKDVKLILDTILETITE 34 (90)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 55666666666668888888777766665543
No 87
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=22.54 E-value=61 Score=25.71 Aligned_cols=76 Identities=11% Similarity=0.155 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHHhhccc-CcceecCCCEEEEeCCCCCHHHHHHHHHhc----CCCCCCeEEEeccccCCCCCcHHHHH
Q 029935 21 PEQEVNILCEQARAILVEE-WNVQPVKCPVTVCGDIHGQFHDLVELFRIG----GNAPDTNYLFMGDYVDRGYYSVETVT 95 (185)
Q Consensus 21 ~~~~~~~l~~~~~~~l~~~-~~~~~~~~~i~vigDIHG~~~~l~~ll~~~----~~~~~~~lv~lGD~vdrG~~~~e~l~ 95 (185)
|++|+..|++...+.+.++ +.+.....++-+|||+..=-..+.+.++.+ .....-.+.++-.|-+| -|+++
T Consensus 116 p~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvrviG~~~~lp~~~~~~i~~ae~~T~~n~~l~Lnia~~YgGR----~EIv~ 191 (284)
T 2vg3_A 116 SPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVITINYCVNYGGR----TEITE 191 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEESCCTTSCHHHHHHHHHHHHHHTTCCSEEEEEEEEECHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEeCChhhCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCH----HHHHH
Confidence 5788888877777666654 223345568999999997666666555432 22222355556566444 34555
Q ss_pred HHHHH
Q 029935 96 LLVAL 100 (185)
Q Consensus 96 ~l~~l 100 (185)
.+.++
T Consensus 192 A~r~l 196 (284)
T 2vg3_A 192 ATREI 196 (284)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 88
>1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A*
Probab=22.31 E-value=2.4e+02 Score=20.82 Aligned_cols=104 Identities=17% Similarity=0.297 Sum_probs=57.3
Q ss_pred CCCCHHHHHHHHHHHHHhhcccCcceecCCC----EEEEeCCCCCHHHHHHHHHh-cCCCCCCeEEEeccccC--CCCCc
Q 029935 18 KPLPEQEVNILCEQARAILVEEWNVQPVKCP----VTVCGDIHGQFHDLVELFRI-GGNAPDTNYLFMGDYVD--RGYYS 90 (185)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~----i~vigDIHG~~~~l~~ll~~-~~~~~~~~lv~lGD~vd--rG~~~ 90 (185)
..++++++..+=+.++++.+..-++....++ .-...+ .|+.+. .++++. ....+.-+++-.||++| +||+.
T Consensus 110 ~~~t~edl~~IE~~m~~iI~~~~pi~~~~~~~~eA~~~f~~-~~~~~k-~~l~~~~~~~~~~v~vy~~g~~~dlC~G~Hv 187 (224)
T 1tke_A 110 RTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFAN-RGESYK-VSILDENIAHDDKPGLYFHEEYVDMCRGPHV 187 (224)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTCCBCEEEECCHHHHHHHHHH-TTCHHH-HHHHHHHSCTTCCCEEEEETTEEEEESCCCC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHHHHHHH-cCCchH-HHHhccccCCCCeeEEEEeCCEEEECCCcCC
Confidence 3689999999999999999888777533221 001112 344332 334443 32334458888999887 67754
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCchhhhhhhhC
Q 029935 91 VETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (185)
Q Consensus 91 ~e~l~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 125 (185)
..+=+ +...+... ..--+.||+-...++.+.||
T Consensus 188 ~~Tg~-i~~fkl~~-~~~~yw~g~~~~~~lqRiyg 220 (224)
T 1tke_A 188 PNMRF-CHHFKLMK-TAGAYWRGDSNNKMLQRIYG 220 (224)
T ss_dssp SBGGG-CCCEEEEE-EEEEEGGGCTTSCEEEEEEE
T ss_pred CcCcc-cceEEEEE-ecceeEcCCCCCceeEEEEE
Confidence 33211 00111000 01234677777766666554
No 89
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=22.05 E-value=1.1e+02 Score=19.45 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=22.2
Q ss_pred HHHHHHHHHcC-CCCCHHHHHHHHHHHHHhhcc
Q 029935 7 LDRQIEHLMQC-KPLPEQEVNILCEQARAILVE 38 (185)
Q Consensus 7 ~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~l~~ 38 (185)
..++++.+... ..++..++..+++...+.+..
T Consensus 3 k~eli~~ia~~~~~ls~~~~~~~l~~~~~~i~~ 35 (94)
T 1owf_B 3 KSELIERLATQQSHIPAKTVEDAVKEMLEHMAS 35 (94)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 56777777766 478988888777766655543
No 90
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=22.02 E-value=2.2e+02 Score=20.22 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=36.2
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccC-CCCCcHHHHHHHHHHHHhCCCcEEEEcCCC
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVD-RGYYSVETVTLLVALKVRYRDRITILRGNH 115 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vd-rG~~~~e~l~~l~~l~~~~p~~v~~l~GNH 115 (185)
..++++++. +.......+++..+....-..++.++-+. +.|.+.-....+..+. ..|..+.++ |..
T Consensus 99 g~~~~i~s~--~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~-~~~~~~~~v-GD~ 165 (222)
T 2nyv_A 99 GFKLAVVSN--KLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILG-EEPEKALIV-GDT 165 (222)
T ss_dssp TCEEEEECS--SCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHT-CCGGGEEEE-ESS
T ss_pred CCeEEEEcC--CCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhC-CCchhEEEE-CCC
Confidence 357888887 45556677788776543323455555454 4455544444444443 234455444 654
No 91
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=21.97 E-value=79 Score=20.12 Aligned_cols=32 Identities=6% Similarity=0.197 Sum_probs=21.4
Q ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHhhcc
Q 029935 7 LDRQIEHLMQCKPLPEQEVNILCEQARAILVE 38 (185)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 38 (185)
..++++.+....-++..++..+++...+.+..
T Consensus 3 k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~ 34 (94)
T 1p71_A 3 KGELVDAVAEKASVTKKQADAVLTAALETIIE 34 (94)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 55666666666668988888777666655433
No 92
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=21.88 E-value=82 Score=19.47 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=23.5
Q ss_pred CChhHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHhh
Q 029935 2 PSQADLDRQIEHLMQCKPLPEQ-EVNILCEQARAIL 36 (185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~l 36 (185)
+|.+++++++++.... ++.+ |+..+..+|=.-.
T Consensus 14 ~s~eTLEkv~e~~~y~--L~~~~e~~~f~~AaDHRr 47 (71)
T 2jqt_A 14 SSLESLEKLYDHLNYT--LTDDQELINMYRAADHRR 47 (71)
T ss_dssp CCSHHHHHHHHHHHHH--TCSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHH
Confidence 4678889998877765 7766 8888777654433
No 93
>1z9b_A Translation initiation factor IF-2; protein synthesis translation intiation IF2 FMet-tRNA structure; NMR {Geobacillus stearothermophilus}
Probab=21.33 E-value=51 Score=23.11 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=27.5
Q ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCCCC-eEEE--ecccc
Q 029935 48 PVTVCGDIHGQFHDLVELFRIGGNAPDT-NYLF--MGDYV 84 (185)
Q Consensus 48 ~i~vigDIHG~~~~l~~ll~~~~~~~~~-~lv~--lGD~v 84 (185)
++++=+|++|..+++...|..++..... .++. +|++.
T Consensus 43 ~vIiKaDv~GSlEAl~~~L~~l~~~ev~i~Ii~~gVG~It 82 (135)
T 1z9b_A 43 NLIVKADVQGSVEALVAALQKIDVEGVRVKIIHAAVGAIT 82 (135)
T ss_dssp EEEEEESSHHHHHHHHHHHTTCCCSSCEEEEEEEEESCBC
T ss_pred CEEEEeCCcchHHHHHHHHHhcCCCceEEEEEeecCCCCC
Confidence 6899999999999999999987654333 3333 66653
No 94
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=21.32 E-value=1.8e+02 Score=20.66 Aligned_cols=68 Identities=10% Similarity=0.055 Sum_probs=41.3
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhC-CCcEEEEcCCCc
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-RDRITILRGNHE 116 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~-p~~v~~l~GNHE 116 (185)
..+++++++ +........++..+..+.-..++.+|.+..+....+.+..+.+.-... |.+++++ |...
T Consensus 126 g~~~~i~s~--~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~v-GD~~ 194 (240)
T 3sd7_A 126 GKILLVATS--KPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMV-GDRK 194 (240)
T ss_dssp TCEEEEEEE--EEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEE-ESSH
T ss_pred CCeEEEEeC--CcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEE-CCCH
Confidence 357888876 455566677777765544345667777777766666666655443333 5555555 5544
No 95
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=21.27 E-value=41 Score=21.13 Aligned_cols=38 Identities=13% Similarity=0.068 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCH
Q 029935 22 EQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQF 59 (185)
Q Consensus 22 ~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~ 59 (185)
++-+..|+++...+-..-......+.+..+.+|+.+++
T Consensus 37 qeRLr~llekl~~~a~~R~~~~K~d~ry~~tsDvR~QL 74 (75)
T 1h3o_A 37 QQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQL 74 (75)
T ss_dssp HHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHHHHHHhhhhhhcCCCCeEeeccHHhhc
Confidence 44455566666555555555666677899999998864
No 96
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=20.29 E-value=1.2e+02 Score=22.97 Aligned_cols=75 Identities=19% Similarity=0.102 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHHhhcccCcceecCCCEEEEeCCCCCHHHHHHHHHhc----CCCCCCeEEEeccccCCCCCcHHHHHH
Q 029935 21 PEQEVNILCEQARAILVEEWNVQPVKCPVTVCGDIHGQFHDLVELFRIG----GNAPDTNYLFMGDYVDRGYYSVETVTL 96 (185)
Q Consensus 21 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~i~vigDIHG~~~~l~~ll~~~----~~~~~~~lv~lGD~vdrG~~~~e~l~~ 96 (185)
|++|+..|.+...+.+..+-.- ....++-+|||+..=-..+.+.++.+ .....-.+.++-.|-+| -|+++.
T Consensus 64 p~~Ev~~Lm~l~~~~l~~~~~~-~~~vrv~~iG~~~~lp~~~~~~i~~~~~~T~~n~~l~lnia~~YggR----~eI~~A 138 (227)
T 2vg0_A 64 DPDELAALIEIITDVVEEICAP-ANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGR----REIVDA 138 (227)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCT-TTCCEEEEESCGGGSCHHHHHHHHHHHHTSCSSCSCEEEEEEEECHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhcc-ccCeEEEecCChhhCCHHHHHHHHHHHHHhcCCCceEEEEEecCCCH----HHHHHH
Confidence 6788888877777777654321 45568999999987555665554432 22222356666666444 344444
Q ss_pred HHHH
Q 029935 97 LVAL 100 (185)
Q Consensus 97 l~~l 100 (185)
+.++
T Consensus 139 ~r~l 142 (227)
T 2vg0_A 139 VRAL 142 (227)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 97
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=20.18 E-value=61 Score=27.23 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCC--CCCHHHHHHHHHHHHHhhcccC-cceecCCCEEEEe-CCC-CCHHHHHHHHHhcCCCCCCeEEEec
Q 029935 7 LDRQIEHLMQCK--PLPEQEVNILCEQARAILVEEW-NVQPVKCPVTVCG-DIH-GQFHDLVELFRIGGNAPDTNYLFMG 81 (185)
Q Consensus 7 ~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~l~~~~-~~~~~~~~i~vig-DIH-G~~~~l~~ll~~~~~~~~~~lv~lG 81 (185)
+++-++-+.++- +++++++..+++ .+.| .++.--.| -| ++| |++-.+..+.... ..+.+.++++|
T Consensus 8 ~~~~~~li~Rg~~e~~~~~~L~~~L~------~~~~~~vy~G~dP---Tg~sLHlGh~v~l~~l~~lQ-~~G~~~i~lIg 77 (432)
T 1h3f_A 8 PEEALALLKRGAEEIVPEEELLAKLK------EGRPLTVKLGADP---TRPDLHLGHAVVLRKMRQFQ-ELGHKVVLIIG 77 (432)
T ss_dssp HHHHHHHHHTTCSEEETHHHHHHHHH------TCSCCEEEEEECT---TCCSCBHHHHHHHHHHHHHH-HTTCEEEEEEC
T ss_pred HHHHHHHHHcchHHhCCHHHHHHHHh------cCCCcEEEEcccC---CCCCCchhhHHHHHHHHHHH-HCCCCEEEEEc
Confidence 444555555554 678888888874 1222 12111111 23 588 7777655443322 22356788899
Q ss_pred cccCC
Q 029935 82 DYVDR 86 (185)
Q Consensus 82 D~vdr 86 (185)
|+-..
T Consensus 78 D~ta~ 82 (432)
T 1h3f_A 78 DFTGM 82 (432)
T ss_dssp CCC--
T ss_pred cceEE
Confidence 97643
No 98
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=20.02 E-value=2.4e+02 Score=19.87 Aligned_cols=68 Identities=10% Similarity=-0.035 Sum_probs=41.0
Q ss_pred CCCEEEEeCCCCCHHHHHHHHHhcCCCCCCeEEEeccccCCCCCcHHHHHHHHHHHHhCCCcEEEEcCCCc
Q 029935 46 KCPVTVCGDIHGQFHDLVELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (185)
Q Consensus 46 ~~~i~vigDIHG~~~~l~~ll~~~~~~~~~~lv~lGD~vdrG~~~~e~l~~l~~l~~~~p~~v~~l~GNHE 116 (185)
..+++++++- ........++..+....-..++.+|-+..+....+.+..+.+.....|.+++++ |...
T Consensus 111 g~~~~i~t~~--~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~i-GD~~ 178 (232)
T 1zrn_A 111 GLKLAILSNG--SPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFV-ASNA 178 (232)
T ss_dssp TCEEEEEESS--CHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEE-ESCH
T ss_pred CCEEEEEeCC--CHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEE-eCCH
Confidence 3578888763 445566777776654433456667767766666666665554333345566666 7654
Done!