BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029937
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pcp PE=1 SV=1
Length = 208
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
VTGF+ F G NPTE I +L G+ +G + G V P+
Sbjct: 5 VTGFEPFGGEKINPTERIAKDL----------DGIKIGDAQVF-----GRVLPVVFGKAK 49
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPA 165
+ EK E I +H G+ G + +IE+ AVN R PD G K + PI P
Sbjct: 50 EVLEKTLEEIKPD--IAIHVGLAPGRSAISIERIAVNAIDARIPDNEGKKIEDEPIVPG 106
>sp|B7LKQ5|PCP_ESCF3 Pyrrolidone-carboxylate peptidase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pcp PE=3 SV=1
Length = 214
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQT 103
T+ +TGF+ F G NP+ +VS L ILG C ++
Sbjct: 3 TVLITGFEPFGGEQINPSWEVVSQLDNA----------ILGGCRVVARQLPCVFGESLAV 52
Query: 104 LQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
L SAI+ + + G G T +E+ A+N R PD G +P VP+
Sbjct: 53 LNSAIDALSPS-------VVLAVGQAGGRTDITVERVAINVDDARIPDNRGNQPVDVPVI 105
Query: 164 P 164
P
Sbjct: 106 P 106
>sp|O58321|PCP_PYRHO Pyrrolidone-carboxylate peptidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pcp PE=1 SV=1
Length = 206
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
I +TGF+ F G +NPT IV L E + + ++G IL + A L + L
Sbjct: 3 ILLTGFEPFGGDDKNPTMDIVEALSERIPE-------VVGE--ILPVSFKRAREKLLKVL 53
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
+ R I ++ G+ G T ++E+ AVN R PD G +P+ PI
Sbjct: 54 D-----------DVRPDITINLGLAPGRTHISVERVAVNMIDARIPDNDGEQPKDEPI 100
>sp|O07883|PCP_THELI Pyrrolidone-carboxylate peptidase OS=Thermococcus litoralis GN=pcp
PE=1 SV=1
Length = 220
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
+ +TGF+ F G S+NPTE I +Y +K + ++ G +L + A L + L
Sbjct: 4 VLITGFEPFGGDSKNPTEQIA----KYFDRKQIGNAMVYG--RVLPVSVKRATIELKRYL 57
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKP 157
+ E I ++ G+ + +E+ AVN R PD G++P
Sbjct: 58 EEIKPE-----------IVINLGLAPTYSNITVERIAVNIIDARIPDNDGYQP 99
>sp|Q9UYQ9|PCP_PYRAB Pyrrolidone-carboxylate peptidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pcp PE=3 SV=1
Length = 200
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
+ VTGF+ F G +NPT IV L G +G ++ G V P+ +
Sbjct: 3 VLVTGFEPFGGDDKNPTMEIVKFL----------DGKEIGGAKVI-----GRVLPV--SF 45
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
+ A E + + + ++ G+ G T ++E+ AVN R PD G KP PI
Sbjct: 46 KRARKELVAILDEIKPDVTINLGLAPGRTHISVERVAVNIIDARIPDNDGEKPIDEPI 103
>sp|A5CM68|PCP_CLAM3 Pyrrolidone-carboxylate peptidase OS=Clavibacter michiganensis
subsp. michiganensis (strain NCPPB 382) GN=pcp PE=3 SV=1
Length = 213
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQT 103
T+ +TGF+ F G + NP+ T V +R+ G I A +
Sbjct: 3 TVLLTGFEPFDGDTSNPSWTAVQEVRDRWD----------GDAEIQVRQLPVDFAKVDDA 52
Query: 104 LQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
L++A+ E D + + + G+ G +E+ A+N R PD G++P P+
Sbjct: 53 LRAALAEVDPD-------VVISVGLAGGIETLEVERVAINVDDARIPDNTGFQPIDEPV 104
>sp|Q8RBX8|PCP1_THETN Pyrrolidone-carboxylate peptidase 1 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=pcp1 PE=3 SV=1
Length = 203
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
I VT F F G S NP+ ++ NL++ ++ I++ A Y ++
Sbjct: 3 ILVTAFDPFGGESVNPSYEVLKNLKDNIE-----------GAEIIKLQVPTA---FYVSV 48
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFP 164
+ AI EK E N ++ + G G ++E+ A+N R PD MG +P +PI P
Sbjct: 49 EKAI-EKIKE-VNPDAVLSI--GQAGGRYDISVERVAINIDDARIPDNMGQQPIDIPIDP 104
>sp|A4W870|PCP_ENT38 Pyrrolidone-carboxylate peptidase OS=Enterobacter sp. (strain 638)
GN=pcp PE=3 SV=1
Length = 214
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 18/123 (14%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
I VTGF+ F G + NP+ +V L +G+ + C ++ L
Sbjct: 4 ILVTGFEPFGGETLNPSWEVVKQL----------EGMTIDDCRVVTRQLPCVFGESLTLL 53
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFP 164
SAI+E + + + G G +E+ +N R PD G +P V I P
Sbjct: 54 NSAIDELNPT-------VVIAVGQAGGRVDITVERVGINVDDARIPDNRGQQPIDVAIVP 106
Query: 165 ADG 167
DG
Sbjct: 107 -DG 108
>sp|A1JR34|PCP_YERE8 Pyrrolidone-carboxylate peptidase OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=pcp PE=3 SV=1
Length = 215
Score = 37.4 bits (85), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQT 103
++ +TGF+ F G NP+ +V L ++M LG ++ A
Sbjct: 3 SVLITGFEPFGGERVNPSWEVVKQLNDFM----------LGGVKVVARQLPCAFGEALTA 52
Query: 104 LQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
L +AI+E + ++ + G G +IE+ A+N R D +G +P PI
Sbjct: 53 LNAAIDEI-------QPVLVLAIGQAGGRADISIERVAINVDDARIADNLGNQPIDQPI 104
>sp|A7FFS3|PCP_YERP3 Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|Q667T6|PCP_YERPS Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|A4TKZ3|PCP_YERPP Pyrrolidone-carboxylate peptidase OS=Yersinia pestis (strain
Pestoides F) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|Q1CKF9|PCP_YERPN Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|A9R3Y5|PCP_YERPG Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|Q8ZD86|PCP_YERPE Pyrrolidone-carboxylate peptidase OS=Yersinia pestis GN=pcp PE=3
SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|B2KA64|PCP_YERPB Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|Q1C571|PCP_YERPA Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|B1JRB0|PCP_YERPY Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=pcp PE=3 SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G NP+ +V + + M +G I+ A L +
Sbjct: 6 ITGFEPFGGERINPSWEVVKQMNDLM----------MGGVRIVARQLPCAFGEALTALNT 55
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
AI++ + ++ + G G IE+ A+N R PD +G +P PI
Sbjct: 56 AIDD-------VQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVDQPII 105
>sp|A8AJA6|PCP_CITK8 Pyrrolidone-carboxylate peptidase OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pcp PE=3 SV=1
Length = 214
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQT 103
T+ +TGF+ F G NP+ +VS L I+ C ++
Sbjct: 3 TVLITGFEPFGGEQVNPSWEVVSRL----------DNAIIAGCRVVARQLPCVFGDSLTV 52
Query: 104 LQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
L +AI+ ++ + G G T +E+ A+N R PD G +P PI
Sbjct: 53 LNAAIDALSP-------VLVLAIGQAGGRTDITVERVAINIDDARIPDNRGRQPVDEPIV 105
>sp|Q8R9J6|PCP2_THETN Pyrrolidone-carboxylate peptidase 2 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=pcp2 PE=3 SV=1
Length = 206
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
I VT F F G S NP+ ++ NL++ ++ E Y ++
Sbjct: 3 ILVTAFDPFGGESINPSYEVLKNLKDNIEGA--------------EIVKIQVPTVFYLSV 48
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFP 164
+ AI EK E N ++ + G G ++E+ A+N R PD +G +P PI P
Sbjct: 49 EKAI-EKIKE-VNPDAVLSI--GQAGGRYDISVERVAINIDDARIPDNIGQQPIDTPIDP 104
>sp|Q8D4N5|PCP_VIBVU Pyrrolidone-carboxylate peptidase OS=Vibrio vulnificus (strain
CMCP6) GN=pcp PE=3 SV=1
Length = 212
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 21/119 (17%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL--YQTL 104
+TGF+ F G S NP+ +V M + +P+ I+G C + P+ YQ +
Sbjct: 6 LTGFEPFGGESINPSLELVKQ----MASRALPQVEIIG-CEV----------PVVRYQAI 50
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
++ + ++ + + + G SG E+ A+N +R D G +P PI
Sbjct: 51 ETVLQAVETHQPD----LVLMIGQASGRCAITPERVAINLDDYRIEDNAGHQPVDEPII 105
>sp|Q7MG84|PCP_VIBVY Pyrrolidone-carboxylate peptidase OS=Vibrio vulnificus (strain
YJ016) GN=pcp PE=3 SV=1
Length = 212
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 21/119 (17%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL--YQTL 104
+TGF+ F G S NP+ +V M + +P+ I+G C + P+ YQ +
Sbjct: 6 LTGFEPFGGESINPSLELVKQ----MASRALPQVEIIG-CEV----------PVVRYQAI 50
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
++ + ++ + + + G SG E+ A+N +R D G +P PI
Sbjct: 51 ETVLQAVETHQPD----LVLMIGQASGRCAITPERVAINLDDYRIEDNAGHQPVDEPII 105
>sp|C3MP49|PCP_SULIL Pyrrolidone-carboxylate peptidase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=pcp PE=3 SV=1
Length = 209
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ IV L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIVEALN---------------GSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E + I+ + GV G + E+ A+N R D G +K +K
Sbjct: 46 EKIEDLIVTKIRE---MKPILTLGIGVAPGRAKITPEKIAINYKYSREGDNAGKKYKGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|C4KEG7|PCP_SULIK Pyrrolidone-carboxylate peptidase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=pcp PE=3 SV=1
Length = 209
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ IV L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIVEALN---------------GSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E + I+ + GV G + E+ A+N R D G +K +K
Sbjct: 46 EKIEDLIVTKIRE---MKPILTLGIGVAPGRAKITPEKIAINYKYSREGDNAGKKYKGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|C3N2L8|PCP_SULIA Pyrrolidone-carboxylate peptidase OS=Sulfolobus islandicus (strain
M.16.27) GN=pcp PE=3 SV=1
Length = 209
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ IV L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIVEALN---------------GSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E + I+ + GV G + E+ A+N R D G +K +K
Sbjct: 46 EKIEDLIVTKIRE---MKPILTLGIGVAPGRAKITPEKIAINYKYSREGDNAGKKYKGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|P58202|PCP2_SULSO Pyrrolidone-carboxylate peptidase 2 OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pcp2
PE=3 SV=1
Length = 209
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ IV L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIVEALN---------------GSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E + I+ + GV G + E+ A+N R D G +K +K
Sbjct: 46 EKIEDLIVTKIRE---MKPILTLGIGVAPGRAKITPEKIAINYKYSREGDNAGKKYKGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|A7GQB6|PCP_BACCN Pyrrolidone-carboxylate peptidase OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=pcp PE=3 SV=1
Length = 215
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQT 103
T+ +TGF F G NP + L E K+G +I + T H ++ +
Sbjct: 3 TVLLTGFDPFGGEKINPAWEVAKALHE---KEGNGYKVI---SKQIPTVFHKSI----EQ 52
Query: 104 LQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
L+S I+E + E + + G G +E+ A+N R PD ++P VPI
Sbjct: 53 LESYIDEFNPE-------LIICIGQAGGRADITVERVAINVDDARIPDNENYQPIDVPII 105
Query: 164 PADGEIS 170
DG ++
Sbjct: 106 -EDGPVA 111
>sp|Q8RI83|PCP_FUSNN Pyrrolidone-carboxylate peptidase OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=pcp PE=3 SV=1
Length = 214
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
I VTGF F G NP ++ K +PK + ILE + +Y+
Sbjct: 4 ILVTGFDPFGGEKINPALEVI---------KLLPKKIGENEIKILE------IPTVYKKS 48
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFP 164
I +K+ ES + I+ + G G T +IE+ A+N FR D G +P I+
Sbjct: 49 IEKI-DKEIESYDPDYILSI--GQAGGRTDISIERIAINIDDFRIKDNEGNQPIDEKIY- 104
Query: 165 ADGE 168
DG+
Sbjct: 105 LDGD 108
>sp|Q1I9K4|PANB1_PSEE4 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 OS=Pseudomonas
entomophila (strain L48) GN=panB1 PE=3 SV=1
Length = 269
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 3 CVYVFS---CRCLDIDFNFHAINTLPYFISRQLFVMGSEGPPAVTIHVTGFKKFHGVSEN 59
C V S C + ++ N T+ + + R + VM G +HV G K G++E
Sbjct: 103 CAQVLSETGCDAVKLESNRALAPTVAFLVERGIPVMAHVGLMPQFVHVMGGYKAQGLTEA 162
Query: 60 PTETIVSNLR 69
ETIV + R
Sbjct: 163 SAETIVEDAR 172
>sp|Q8XT56|PCP2_RALSO Pyrrolidone-carboxylate peptidase 2 OS=Ralstonia solanacearum
(strain GMI1000) GN=pcp2 PE=3 SV=1
Length = 215
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 126 FGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADG 167
G+ SG + ++E+ A+N R PD G +P VP+ ADG
Sbjct: 68 LGLASGRSELSVERVAINVIDARIPDNAGNQPVDVPVV-ADG 108
>sp|Q87IL9|PCP_VIBPA Pyrrolidone-carboxylate peptidase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=pcp PE=3 SV=1
Length = 212
Score = 33.5 bits (75), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G + NP V L E G I+ +C + T ++++ +
Sbjct: 6 ITGFEPFGGDAINPALEAVKRLEETSLDGG-----IIVTCQVPVTR--------FESISA 52
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
I+ ++ + + G +G E+ A+N FR PD G +P PI
Sbjct: 53 VIDAIEAYQPDC----VITVGQAAGRAAITPERVAINVDDFRIPDNGGNQPIDEPII 105
>sp|P58201|PCP1_SULSO Pyrrolidone-carboxylate peptidase 1 OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pcp1
PE=3 SV=1
Length = 211
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ IV L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIVE---------------ALNRSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E ++ I+ + G+ G + E+ A+N R D G ++ +K
Sbjct: 46 KKIEDVIVTKIRE---TKPILTLGIGLAPGRAKITPEKIAINYRYSREGDNAGKKYRGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|C3NAL6|PCP_SULIY Pyrrolidone-carboxylate peptidase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=pcp PE=3 SV=1
Length = 209
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ I L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIAE---------------ALNGSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E + I+ + GV G + E+ A+N R D G +K +K
Sbjct: 46 EKIEDLIVTKIRE---MKPILTLGIGVAPGRAKITPEKIAINYKYSREGDNAGKKYKGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|C3NL04|PCP_SULIN Pyrrolidone-carboxylate peptidase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=pcp PE=3 SV=1
Length = 209
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 21/142 (14%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPL-Y 101
+T+ + GF+ F ENP++ I L IL+ G + P+ Y
Sbjct: 1 MTVLLFGFEPFLEYKENPSQLIAE---------------ALNGSTILKEEVKGVILPVEY 45
Query: 102 QTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMG--WKPQK 159
+ ++ I K E + I+ + GV G + E+ A+N R D G +K +K
Sbjct: 46 EKIEDLIVTKIRE---MKPILTLGIGVAPGRAKITPEKIAINYKYSREGDNAGKKYKGEK 102
Query: 160 VPIFPADGEISRVREVEMISLF 181
+ DG + + +++ L
Sbjct: 103 IDPLGQDGIFTNIPVEDLVDLL 124
>sp|B5XZE0|PCP_KLEP3 Pyrrolidone-carboxylate peptidase OS=Klebsiella pneumoniae (strain
342) GN=pcp PE=3 SV=1
Length = 214
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 17/118 (14%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
+ +TGF+ F G + NP+ +V L M G P C E A++ LY +
Sbjct: 4 VLLTGFEPFDGETVNPSWEVVKQLDGTMIA-GQPVIARQLPCVFGE-----ALSVLYAAI 57
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
E R +I V G G ++E+ A+N R PD G +P PI
Sbjct: 58 ---------EDLQPRLVIAV--GQAGGRVDISVERVAINVDDARIPDNKGQQPVDTPI 104
>sp|A7N3R7|PCP_VIBHB Pyrrolidone-carboxylate peptidase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=pcp PE=3 SV=1
Length = 212
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
+TGF+ F G S NP V L K + G ++ C + T Y+++ +
Sbjct: 6 MTGFEPFGGESINPALEAVKRL----DGKKLDGGEVM-ICQVPVTR--------YESIDT 52
Query: 107 AINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
+N + + I + G +G E+ A+N FR PD G +P P+
Sbjct: 53 VVNAIEQYQPD----IVITVGQAAGRAAITPERVAINVDDFRIPDNGGHQPIDEPVI 105
>sp|P56175|RCL1_DROME Probable RNA 3'-terminal phosphate cyclase-like protein
OS=Drosophila melanogaster GN=Rtc1 PE=2 SV=3
Length = 384
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Query: 98 APLYQTLQSAINEKDSESANS---------RRIIWVHFGVNSGATRFAIEQQAVNEATFR 148
+PL TL+ N KDS S + +R + V G+ R + E FR
Sbjct: 115 SPLQCTLRGVTNSKDSPSVDHIKGAALSLLKRFLLVDEGLELKVVRRGVAPLGGGEIIFR 174
Query: 149 CPDEMGWKPQKVPIFPADGEISRVR 173
CP K + F + G + R+R
Sbjct: 175 CPVR---KSLRAIQFQSQGMVKRIR 196
>sp|Q7NHX6|PCP_GLOVI Pyrrolidone-carboxylate peptidase OS=Gloeobacter violaceus (strain
PCC 7421) GN=pcp PE=3 SV=1
Length = 205
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNI----LETAGHGAVAPL 100
+ +TGF+ F G NP+ + S L E + C + L T ++A L
Sbjct: 3 VLLTGFEPFAGELVNPSWEVASRLAERR----------ISGCTVAAERLPTVFGASIACL 52
Query: 101 YQTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKV 160
L+ R V G G +IE+ A+N R PD G +P ++
Sbjct: 53 RTALE-----------RHRPQAVVCLGEAGGRAAISIERVALNLDEARIPDNKGQQPVEI 101
Query: 161 PIFP 164
P+ P
Sbjct: 102 PVEP 105
>sp|P54741|AFSK_STRCO Serine/threonine-protein kinase AfsK OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=afsK PE=1 SV=2
Length = 799
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 29 SRQLFVMGSEGPPAVTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGL--ILGSC 86
+ +F +GS + TG FHG NP ET+ LRE +G+P L ++ SC
Sbjct: 194 ASDVFSLGS----MLVFAATGHPPFHGA--NPVETVFMLLREGPDLEGLPDELRPLIESC 247
Query: 87 NILETAGHGAVAPLYQTL 104
+E G A L L
Sbjct: 248 MQMEATGRPNPADLQAQL 265
>sp|B7IEE2|PCP_THEAB Pyrrolidone-carboxylate peptidase OS=Thermosipho africanus (strain
TCF52B) GN=pcp PE=3 SV=1
Length = 205
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 43 VTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQ 102
+ I +TGF+ F G NP+ V +L + ++K I++ A H +
Sbjct: 1 MKILITGFEPFGGEVVNPSFEAVKHLPDSIEK-----------AQIVKAAIHTVFRKSIE 49
Query: 103 TLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
L+ I ++ + I + G G IE+ A+N + PD G P+ I
Sbjct: 50 VLEELIVKEKPD-------IVICVGQAGGRAEITIERVAINIDDAKNPDNEGNTPKDEVI 102
Query: 163 FPADGE 168
F DGE
Sbjct: 103 F-EDGE 107
>sp|Q838N8|PCP_ENTFA Pyrrolidone-carboxylate peptidase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=pcp PE=3 SV=1
Length = 213
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 20/117 (17%)
Query: 47 VTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTLQS 106
VTGF F G + NP + K +P E AG + T+
Sbjct: 5 VTGFDPFGGEAINPA---------FEAVKKLPA----------EIAGAEIIKVEVPTVFG 45
Query: 107 AINEKDSESANSRR-IIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
EK +E+ + + + + G G +E+ A+N A R PD G +P VP+
Sbjct: 46 TSGEKVAEAIETHQPDMVICVGQAGGRETVTVEKVAINLAEARIPDNAGQQPSDVPL 102
>sp|Q9RX25|PCP_DEIRA Pyrrolidone-carboxylate peptidase OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=pcp PE=3
SV=1
Length = 218
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQT 103
T+ +TGF+ FH +NP+ L +P G + S +L H A A L +
Sbjct: 3 TLLLTGFEPFHTHPDNPSAQAAQELHGLE----LPGGWGVHSA-LLPVEPHAAGAALTRL 57
Query: 104 LQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIF 163
L +E+D + + G+ +G + +E+ V F+ PD G + PI
Sbjct: 58 L----SEQDPGAV-------LLTGLAAGRPQVTLERVGVGVMDFQIPDNAGQTYRDQPIE 106
Query: 164 P 164
P
Sbjct: 107 P 107
>sp|Q639M5|PCP_BACCZ Pyrrolidone-carboxylate peptidase OS=Bacillus cereus (strain ZK /
E33L) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 29/125 (23%)
Query: 44 TIHVTGFKKFHGVSENPTETIVSNL-----REY-MKKKGMPKGLILGSCNILETAGHGAV 97
T+ +TGF F G S NP + +L REY + K +P T H ++
Sbjct: 3 TVLLTGFDPFGGESINPAWEVAKSLHEKTIREYKIISKQVP------------TVFHKSI 50
Query: 98 APLYQTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKP 157
Q L+ I+E + E I + G G IE+ A+N R D G +P
Sbjct: 51 ----QVLKEYIDELNPE-------IIICIGQAGGRPDITIERVAINIDDARIADNEGNQP 99
Query: 158 QKVPI 162
VP+
Sbjct: 100 VDVPV 104
>sp|B5Y5X6|PCP_COPPD Pyrrolidone-carboxylate peptidase OS=Coprothermobacter
proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=pcp
PE=3 SV=1
Length = 207
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 17/118 (14%)
Query: 45 IHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGLILGSCNILETAGHGAVAPLYQTL 104
I +TGF+ F G NP+E V L +G + ++ V P+
Sbjct: 4 ILLTGFEPFGGEKVNPSELAVKQL----------EGKTIAGLEVV-----AGVLPVVTV- 47
Query: 105 QSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPI 162
I+E + ++ G G +IE+ A+N +R PD G + + P+
Sbjct: 48 -KCIDEAVKLIEKYEPVAVLNVGQAGGRVELSIEKVAINVKDYRIPDNEGNQIRYAPV 104
>sp|P54742|AFSK_STRGR Serine/threonine-protein kinase AfsK OS=Streptomyces griseus
GN=afsK PE=3 SV=1
Length = 807
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 29 SRQLFVMGSEGPPAVTIHVTGFKKFHGVSENPTETIVSNLREYMKKKGMPKGL--ILGSC 86
+ +F +GS + TG FHG NP ET+ +RE +G+P L ++ SC
Sbjct: 194 ASDIFSLGS----TLVFAATGHAPFHGA--NPVETVFMLVREGPDLEGLPDDLRPLIESC 247
Query: 87 NILETAGHGAVAP 99
++ A H A P
Sbjct: 248 MQMD-ATHPAAEP 259
>sp|P77489|YAGR_ECOLI Putative xanthine dehydrogenase YagR molybdenum-binding subunit
OS=Escherichia coli (strain K12) GN=yagR PE=3 SV=1
Length = 732
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 84 GSCNILETAGHGAVAPLYQTLQSAINEKDSESANSRRIIWVHFGVNSGATRFAIEQQAVN 143
G N G + +Q + + E ++ + ++ H+ N GA A E+QAVN
Sbjct: 92 GDKNTARLLGGPTIEHYHQAIALVVAETFEQARAAASLVQAHYRRNKGAYSLADEKQAVN 151
Query: 144 EATFRCPDE 152
+ PD+
Sbjct: 152 QPPEDTPDK 160
>sp|B3MFV7|LPHN_DROAN Latrophilin Cirl OS=Drosophila ananassae GN=Cirl PE=3 SV=1
Length = 1714
Score = 30.0 bits (66), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 68 LREYMKKKGMPKGLILGSCNILET--AGHGAVAPLYQTLQSAINEKDSESANSRRIIWVH 125
L E +++ + GL+ G+ + AGH V TL+S + + SA S +I+ H
Sbjct: 1111 LNEAQQRRTLKSGLMTGTLQTPQQPLAGH-VVLERGSTLRSTGHASPTSSAGSTHLIFAH 1169
Query: 126 FGVNSGATRFAIEQQAVNEATFRCPDEMGWKPQKVPIFPADGEISRVRE 174
+ +QQA+ E+ + PD WK P G + RE
Sbjct: 1170 --------KQQQQQQALGESYYHQPDYYSWKQ------PPQGGLKSQRE 1204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,930,955
Number of Sequences: 539616
Number of extensions: 2586672
Number of successful extensions: 6457
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 6417
Number of HSP's gapped (non-prelim): 54
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)