BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029939
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU64|SODF2_ARATH Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana
GN=FSD2 PE=1 SV=1
Length = 305
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 133/157 (84%), Gaps = 12/157 (7%)
Query: 34 NKKMEQRKTGGR-----------ISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAY 82
N++M+ ++ G R I+A F+LKPPPYPL+ALEPHMS++TL++HWGKHH+ Y
Sbjct: 26 NRRMQWKRNGKRRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTY 85
Query: 83 VDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKP 142
V+NLNKQI+GT+L D SLE+VV+ SYNKG++LPAFNNAAQAWNH+FFWES++PGGGGKP
Sbjct: 86 VENLNKQILGTDL-DALSLEEVVLLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKP 144
Query: 143 SGELLGLIERDFGSFEKFLEEFKAAAATQFGSGWAWL 179
+GELL LIERDFGSFE+FLE FK+AAA+ FGSGW WL
Sbjct: 145 TGELLRLIERDFGSFEEFLERFKSAAASNFGSGWTWL 181
>sp|P22302|SODF_NICPL Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana
plumbaginifolia GN=SODB PE=2 SV=1
Length = 202
Score = 226 bits (577), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Query: 49 KFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
KF+L+PPPYP++ALEPHMS T EFHWGKHHRAYVDNLNKQI GTEL DGK+LED+++ +
Sbjct: 1 KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTEL-DGKTLEDIILVT 59
Query: 109 YNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAA 168
YNKG LPAFNNAAQAWNH FFWESMKP GGG+PSGELL LI RDFGS++ F++EFKAAA
Sbjct: 60 YNKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAA 119
Query: 169 ATQFGSGWAWLVSAP 183
ATQFGSGWAWL P
Sbjct: 120 ATQFGSGWAWLAYKP 134
>sp|P28759|SODF_SOYBN Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB
PE=2 SV=1
Length = 248
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/139 (80%), Positives = 126/139 (90%), Gaps = 1/139 (0%)
Query: 41 KTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKS 100
K G +++AKF+LKPPPYPLN LEP MS+ TLEFHWGKHH+ YV+NL KQ+VGTEL DGKS
Sbjct: 18 KEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTEL-DGKS 76
Query: 101 LEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKF 160
LE++++ SYNKGD+LPAFNNAAQ WNHDFFWE MKPGGGGKPSGELL LIERDFGSF KF
Sbjct: 77 LEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKF 136
Query: 161 LEEFKAAAATQFGSGWAWL 179
L+EFKAAAATQFGSGWAWL
Sbjct: 137 LDEFKAAAATQFGSGWAWL 155
>sp|P21276|SODF1_ARATH Superoxide dismutase [Fe] 1, chloroplastic OS=Arabidopsis thaliana
GN=FSD1 PE=1 SV=4
Length = 212
Score = 203 bits (517), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/134 (77%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
Query: 46 ISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV 105
++A + LKPPP+ L+ALEPHMSK TLEFHWGKHHRAYVDNL KQ++GTEL +GK LE ++
Sbjct: 7 VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTEL-EGKPLEHII 65
Query: 106 IASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFK 165
++YN GDLLPAFNNAAQAWNH+FFWESMKPGGGGKPSGELL L+ERDF S+EKF EEF
Sbjct: 66 HSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFN 125
Query: 166 AAAATQFGSGWAWL 179
AAAATQFG+GWAWL
Sbjct: 126 AAAATQFGAGWAWL 139
>sp|Q9FMX0|SODF3_ARATH Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana
GN=FSD3 PE=1 SV=1
Length = 263
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 103/136 (75%)
Query: 45 RISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV 104
++ A + LK PPYPL+ALEP+MS+ TLE HWGKHHR YVDNLNKQ+ + G ++E++
Sbjct: 45 KVEAYYGLKTPPYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEEL 104
Query: 105 VIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEF 164
+ A+YN G+ LP FNNAAQ +NHDFFWESM+PGGG P +L I++DFGSF F E+F
Sbjct: 105 IKATYNNGNPLPEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKF 164
Query: 165 KAAAATQFGSGWAWLV 180
AA TQFGSGW WLV
Sbjct: 165 TNAALTQFGSGWVWLV 180
>sp|Q5VSB7|SODF2_ORYSJ Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os06g0143000 PE=2 SV=1
Length = 255
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 103/153 (67%), Gaps = 6/153 (3%)
Query: 33 RNKKMEQR-----KTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLN 87
R + EQR + ++ A + L PPY L+ALEP++SK T+E HWGKH + YVD+LN
Sbjct: 21 RLRSREQRQGCRSRRYSKVVAYYALTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLN 80
Query: 88 KQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELL 147
KQ+ T + G +LE+++ +YN G+ LP +NNAAQ WNH FFWESM+P GGG P +L
Sbjct: 81 KQL-ATSMFYGYTLEELIKEAYNNGNPLPEYNNAAQVWNHHFFWESMQPEGGGSPGRGVL 139
Query: 148 GLIERDFGSFEKFLEEFKAAAATQFGSGWAWLV 180
IE+DFGSF F EEF +A + GSGW WLV
Sbjct: 140 QQIEKDFGSFTNFREEFIRSALSLLGSGWVWLV 172
>sp|Q8YSZ1|SODF_NOSS1 Superoxide dismutase [Fe] OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=sodB PE=3 SV=3
Length = 200
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Query: 50 FDLKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
F +P PY NALE + M +T E+H+GKHH+AYVDNLNK GTEL D KSLE+V+ +
Sbjct: 3 FVQEPLPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELAD-KSLEEVIQIA 61
Query: 109 YNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAA 168
+ FNNAAQ WNH FFW S+KP GGG P+GE I +DFGSF+K EEF AA
Sbjct: 62 FKDASKAGIFNNAAQVWNHTFFWNSLKPAGGGAPTGEFAAKINQDFGSFDKLKEEFSNAA 121
Query: 169 ATQFGSGWAWLVS 181
ATQFGSGWAWL+
Sbjct: 122 ATQFGSGWAWLID 134
>sp|P77968|SODF_SYNY3 Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sodB PE=1 SV=3
Length = 199
Score = 156 bits (394), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Query: 56 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL 115
PY ALEP +SK TLEFH KHH AYV+N N + GT+L D +S+EDV+ A
Sbjct: 9 PYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTDL-DNQSIEDVIKAVAGDASKA 67
Query: 116 PAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSG 175
FNNAAQAWNH F+W MKPGGGG+PSG L I DFGSF+ F+E FK A ATQFGSG
Sbjct: 68 GIFNNAAQAWNHSFYWNCMKPGGGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSG 127
Query: 176 WAWLV 180
WAWLV
Sbjct: 128 WAWLV 132
>sp|P50061|SODF_PLEBO Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1
Length = 199
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Query: 50 FDLKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
F P P+P +ALEP+ M +T ++H+GKHH AYV NLNK + GT + + SLEDV+ S
Sbjct: 3 FTQPPLPFPKDALEPYGMKAETFDYHYGKHHAAYVTNLNKLVEGTPM-ESLSLEDVIKQS 61
Query: 109 YNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAA 168
+ + FNNAAQ WNH FFW +K GGGG P+GEL I+ FGS +KF EEF AA
Sbjct: 62 FGDSSKVGVFNNAAQVWNHTFFWNCLKAGGGGAPTGELAAKIDAAFGSLDKFKEEFSNAA 121
Query: 169 ATQFGSGWAWLVS 181
ATQFGSGWAWLV
Sbjct: 122 ATQFGSGWAWLVD 134
>sp|P31108|SODF_LEGPH Superoxide dismutase [Fe] OS=Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM
7513) GN=sodB PE=3 SV=1
Length = 192
Score = 147 bits (371), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 90/131 (68%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F L PY L+AL PH+SK+TLE+H+GKHH YV NLNK I GTE + +LE++++ +
Sbjct: 3 FTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEF-ESMTLEEIIMKA- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
KG + FNNAAQ WNH F+W SM P GGG+P G L I + FGSF F E+F AA
Sbjct: 61 -KGGI---FNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAA 116
Query: 170 TQFGSGWAWLV 180
T FGSGWAWLV
Sbjct: 117 TTFGSGWAWLV 127
>sp|P18655|SODF_SYNE7 Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC
7942) GN=sodB PE=3 SV=1
Length = 201
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
++L P+ AL P+++K+TLEFH KHH AYV+N N + T+L DG+ +E V+ A
Sbjct: 3 YELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDL-DGQPIEAVIKAIA 61
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
FNNAAQAWNH F+W S+KP GGG P+G L I DFGSFE F+ EFK AAA
Sbjct: 62 GDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAA 121
Query: 170 TQFGSGWAWLV 180
TQFGSGWAWLV
Sbjct: 122 TQFGSGWAWLV 132
>sp|Q1RH88|SODF_RICBR Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C)
GN=sodB PE=3 SV=1
Length = 209
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + S F L PY + +PH + +T E+H GKHH AYV NLN + E
Sbjct: 1 MTYCDKSNQTSYPFVLPNLPYEKESFKPHFTAETFEYHHGKHHNAYVQNLNNLLKDKEEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K+LE+++ S ++ + FNNAAQ WNH FFW S+KP GGGKPSG++L I DFGS
Sbjct: 61 QKKNLEEIIDWS-SQNQNIAIFNNAAQVWNHTFFWHSIKPNGGGKPSGKILKQINEDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLV 180
FE+F E+FKA A QFGSGWAWLV
Sbjct: 120 FEEFCEQFKAEATGQFGSGWAWLV 143
>sp|Q5VRL3|SODF1_ORYSJ Superoxide dismutase [Fe] 1, chloroplastic OS=Oryza sativa subsp.
japonica GN=Os06g0115400 PE=2 SV=1
Length = 391
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
+ +P PYP +ALEP++SK+T+E HWG H +V+ LN I G+E +G SL ++++S+
Sbjct: 124 IEQQPLPYPSDALEPYISKETVEQHWGVHQNIHVERLNGMIGGSEW-EGMSLGQMMLSSF 182
Query: 110 NKGDLLP--AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
N+G P F +AAQ WNHDF+W SM+PGGGGKP LL I RDFGS++ + +F A
Sbjct: 183 NEGREAPHPPFFHAAQIWNHDFYWRSMQPGGGGKPPERLLKFINRDFGSYDGMIRQFMDA 242
Query: 168 AATQFGSGWAWLV 180
A+TQFGSGW WL
Sbjct: 243 ASTQFGSGWVWLC 255
>sp|P53641|SODF_PSEAE Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=sodB PE=3
SV=3
Length = 193
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 87/131 (66%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P PY NALEPH+S +TLE+H KHH YV NLN I GTE +GKSLE++V +S
Sbjct: 3 FELPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGTEF-EGKSLEEIVKSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W + P GGG+P+G L I FGSF+KF EEF +
Sbjct: 61 -SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSV 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 GTFGSGWGWLV 127
>sp|P19685|SODF_COXBU Superoxide dismutase [Fe] OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=sodB PE=1 SV=1
Length = 193
Score = 140 bits (352), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY LNALEPH+S++TLE+H GKHHRAYV+ LNK I GT + + LE+++ S
Sbjct: 3 FELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPF-EKEPLEEIIRKS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W M P GGG PSGEL I++ FGS EKF F +A
Sbjct: 61 -DGGI---FNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSAN 116
Query: 170 TQFGSGWAWLV 180
FGSGWAWLV
Sbjct: 117 NHFGSGWAWLV 127
>sp|Q4ULI1|SODF_RICFE Superoxide dismutase [Mn/Fe] OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=sodB PE=3 SV=2
Length = 209
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + S F L PY + +PH + +T ++H GKHH AYV NLN + E
Sbjct: 1 MTYCNKSNQTSYPFILPDLPYDKESFKPHFTPETFDYHHGKHHNAYVQNLNNLLKDKEEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K LE+++ S + FNNAAQ WNH FFW S+KP GGGKPSG++L I +DFGS
Sbjct: 61 QKKDLEEIIEWSSQNSNA-AIFNNAAQIWNHSFFWHSIKPQGGGKPSGKILEQINKDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLV 180
FE F E+FK A QFGSGWAWLV
Sbjct: 120 FEGFCEQFKQEAVGQFGSGWAWLV 143
>sp|Q88PD5|SODF_PSEPK Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440)
GN=sodB PE=3 SV=3
Length = 198
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 88/131 (67%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P PY +AL+PH+SK+TLE+H KHH YV NLN + GTE +GK+LE++V +S
Sbjct: 3 FELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W + P GGG+P+G L I FGSF+KF EEF +
Sbjct: 61 -SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSV 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 GTFGSGWGWLV 127
>sp|Q92HJ3|SODF_RICCN Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sodB PE=3 SV=1
Length = 209
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + S F L PY + +PH + +T ++H GKHH YV NLN + E
Sbjct: 1 MTYCNKSNQTSYPFILPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDKEEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K LE+++ S + FNNAAQ WNH FFW S+KP GGGKPSG++L I +DFGS
Sbjct: 61 QKKDLEEIIEWSSQNSNA-AIFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLV 180
FE+F E+FK A QFGSGWAWL+
Sbjct: 120 FEEFCEQFKQEAVGQFGSGWAWLI 143
>sp|P09223|SODF_PSEPU Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3
Length = 198
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P PY +AL+PH+SK+TLEFH KHH YV NLN + GTE +GK+LE++V S
Sbjct: 3 FELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKTS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G + FNNAAQ WNH F+W + P GG+P+G L I FGSF+KF EEF +
Sbjct: 61 -SGGI---FNNAAQVWNHTFYWNCLAPNAGGQPTGALADAINAAFGSFDKFKEEFTKTSV 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 GTFGSGWGWLV 127
>sp|Q68WK0|SODF_RICTY Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=sodB PE=3 SV=1
Length = 209
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 88/144 (61%), Gaps = 1/144 (0%)
Query: 37 MEQRKTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELG 96
M + + S F L PY + +PH + +T ++H GKHH +YV NLN + E
Sbjct: 1 MTYCRKANQTSYPFILPDLPYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREEL 60
Query: 97 DGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGS 156
K LE ++ S +K + FNNA+Q WNH FFW S+KP GGGKPSG++ I +DFGS
Sbjct: 61 QKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGS 119
Query: 157 FEKFLEEFKAAAATQFGSGWAWLV 180
FE+F E+FK A QFGSGW W+V
Sbjct: 120 FEQFCEQFKQEALGQFGSGWVWVV 143
>sp|P09213|SODF_PHOLE Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1
SV=1
Length = 193
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L P+ +NALEPH+S++TLE+H+GKHH YV LN + GTEL + KSLE+++
Sbjct: 2 FELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAE-KSLEEII---- 56
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
K FNNAAQ WNH F+W + P GG+P+GE+ IE+ FGSF +F +F +A
Sbjct: 57 -KTSTGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAI 115
Query: 170 TQFGSGWAWLV 180
FGS W WLV
Sbjct: 116 NNFGSSWTWLV 126
>sp|P0A2F4|SODF_SALTY Superoxide dismutase [Fe] OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=sodB PE=3 SV=2
Length = 193
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S
Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G+L I FGSF +F +F AA
Sbjct: 61 -EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAI 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 KNFGSGWTWLV 127
>sp|P0A2F5|SODF_SALTI Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2
Length = 193
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S
Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G+L I FGSF +F +F AA
Sbjct: 61 -EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAI 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 KNFGSGWTWLV 127
>sp|P37369|SODF_BORPE Superoxide dismutase [Fe] OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=sodB PE=3 SV=2
Length = 192
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Query: 52 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNK 111
L P PY L+AL P +SK+TLEFH+GKHH+ YV NLN I GTE + SLE++V S
Sbjct: 5 LPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGTEF-ENLSLEEIVKKSSGG 63
Query: 112 GDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQ 171
FNNAAQ WNH F+W S+ P GGG+PSG L I+ +GS + F E F +AA
Sbjct: 64 -----VFNNAAQVWNHTFYWNSLSPNGGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGN 118
Query: 172 FGSGWAWLV 180
FGSGW WLV
Sbjct: 119 FGSGWTWLV 127
>sp|Q9ZD15|SODF_RICPR Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii (strain
Madrid E) GN=sodB PE=3 SV=1
Length = 209
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
Query: 47 SAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVI 106
S F L PY + +PH +++T ++H GKHH +YV NLN I E K LE+++
Sbjct: 11 SYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIE 70
Query: 107 ASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKA 166
S ++ NNA+Q WNH FFW S+KP GGGKPSG++ I +DFGSFE+F +FK
Sbjct: 71 WSSQNAEV-AILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQ 129
Query: 167 AAATQFGSGWAWLV 180
A QFGSGW W+V
Sbjct: 130 EAVGQFGSGWTWVV 143
>sp|P0AGD6|SODF_SHIFL Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2
Length = 193
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 KNFGSGWTWLV 127
>sp|P0AGD3|SODF_ECOLI Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB
PE=1 SV=2
Length = 193
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 KNFGSGWTWLV 127
>sp|P0AGD4|SODF_ECOL6 Superoxide dismutase [Fe] OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=sodB PE=3 SV=2
Length = 193
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 KNFGSGWTWLV 127
>sp|P0AGD5|SODF_ECO57 Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3
SV=2
Length = 193
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 86/131 (65%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S
Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSS- 60
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+G + FNNAAQ WNH F+W + P GG+P+G++ I FGSF F +F AA
Sbjct: 61 -EGGV---FNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAI 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 KNFGSGWTWLV 127
>sp|P84612|SODF_PSEHT Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=sodB PE=1 SV=1
Length = 192
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY ++ALEPH+SK+TLEFH GKHH YV LN I GT+ + KSLE++V +S
Sbjct: 2 FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKF-ENKSLEEIVCSS- 59
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+ G FNNAAQ WNH F+W S+ P GGG P+G + I +GSF+ F E A
Sbjct: 60 DGG----VFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAV 115
Query: 170 TQFGSGWAWLV 180
FGS W WLV
Sbjct: 116 NNFGSSWTWLV 126
>sp|P19665|SODF_PORGI Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis (strain
ATCC BAA-308 / W83) GN=sodB PE=1 SV=2
Length = 191
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 84/131 (64%), Gaps = 6/131 (4%)
Query: 51 DLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYN 110
+L PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S
Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS-- 60
Query: 111 KGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAAT 170
+G + FNNA Q NH+ ++ +PG GG P G+L I++ FGSFEKF EEF A T
Sbjct: 61 EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTT 117
Query: 171 QFGSGWAWLVS 181
FGSGW WL S
Sbjct: 118 LFGSGWVWLAS 128
>sp|Q9Y1A9|SODF_PLAVI Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1
Length = 198
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWL 179
WL
Sbjct: 124 GWL 126
>sp|Q27740|SODF_PLAFX Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3)
GN=SODB PE=1 SV=1
Length = 198
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWL 179
WL
Sbjct: 124 GWL 126
>sp|Q9TW89|SODF_PLAFA Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3
SV=1
Length = 198
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWL 179
WL
Sbjct: 124 GWL 126
>sp|Q8IAY6|SODF_PLAF7 Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7)
GN=SODB PE=1 SV=1
Length = 198
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P GE+ I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWL 179
WL
Sbjct: 124 GWL 126
>sp|O30970|SODF_RHOCA Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1
SV=1
Length = 200
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 85/134 (63%), Gaps = 4/134 (2%)
Query: 50 FDLKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS 108
F+L PY +AL MSK+TLE+H HH+AYVDN NK I GTE +GKS+E++V +
Sbjct: 3 FELPALPYAHDALASLGMSKETLEYHHDLHHKAYVDNGNKLIAGTEW-EGKSVEEIVKGT 61
Query: 109 YNKGDLLPA--FNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKA 166
Y G + + FNNA+Q WNH FWE M PG K G L + FGS KF E+F A
Sbjct: 62 YCAGAVAQSGIFNNASQHWNHAQFWEMMGPGEDKKMPGALEKALVESFGSVAKFKEDFAA 121
Query: 167 AAATQFGSGWAWLV 180
A A QFGSGWAWLV
Sbjct: 122 AGAGQFGSGWAWLV 135
>sp|O15905|SODF_BABBO Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1
Length = 199
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F L PY + L PH+S++TL FH+GKHH YV+ LN I GT L + ++E++++
Sbjct: 3 FKLPALPYGMRELIPHISEETLSFHYGKHHAGYVNKLNSLIKGTPL-ESCTIEELIL--- 58
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
G FNNAAQ WNH F+W SM P GG+P+G + IE FGSF F +F A
Sbjct: 59 --GQTGAVFNNAAQIWNHTFYWNSMGPNCGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLA 116
Query: 170 TQFGSGWAWLV 180
FGSGW WLV
Sbjct: 117 GHFGSGWGWLV 127
>sp|Q9Y1B0|SODF_PLAMA Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1
Length = 198
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 57 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP 116
Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S
Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----A 63
Query: 117 AFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQFGSGW 176
FNNAAQ WNH F+W+SM P GG+P G + I+ DFGSF F E+F FGSGW
Sbjct: 64 IFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGW 123
Query: 177 AWL 179
WL
Sbjct: 124 GWL 126
>sp|P34107|SODF_ENTHI Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2
SV=1
Length = 190
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F L PY NALEPH+SK+TLEFH KHH YV+ LN + GTE + K+LE+++
Sbjct: 3 FQLPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTE-QEHKTLEELIKQKP 61
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAA 169
+ +NNAAQAWNH F+W+ M G G KPS +L+ + FG E+F ++F A
Sbjct: 62 TQA----IYNNAAQAWNHAFYWKCM-CGCGVKPSEQLIAKLTAAFGGLEEFKKKFTEKAV 116
Query: 170 TQFGSGWAWLVS 181
FGSGW WLV
Sbjct: 117 GHFGSGWCWLVE 128
>sp|Q81LW0|SODM1_BACAN Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1
SV=1
Length = 203
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Query: 48 AKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVV- 105
AK +L PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V
Sbjct: 2 AKHELPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVA 60
Query: 106 -IASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEF 164
+ + NN NH FFW + P GGG+P GEL IE FGSF+ F EEF
Sbjct: 61 NLNEVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEF 120
Query: 165 KAAAATQFGSGWAWLV 180
A AT+FGSGWAWLV
Sbjct: 121 AKAGATRFGSGWAWLV 136
>sp|Q9XD74|SODF_RHIME Superoxide dismutase [Mn] OS=Rhizobium meliloti (strain 1021)
GN=sodB PE=1 SV=3
Length = 200
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
F+L PY +AL P+MS++TLE+H KHH AYV N NK L D SLED+V SY
Sbjct: 3 FELPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEEAGLSD-LSLEDIVKKSY 61
Query: 110 NKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKP-SGELLGLIERDFGSFEKFLEEFKAAA 168
G P FNNA Q +NH FW+ MK GGGG G+L I+ D G ++KF +F AA
Sbjct: 62 --GTNQPLFNNAGQHYNHVHFWKWMKKGGGGTSLPGKLDAAIKSDLGGYDKFRADFSAAG 119
Query: 169 ATQFGSGWAWL 179
A QFGSGWAWL
Sbjct: 120 AGQFGSGWAWL 130
>sp|P00449|SODM_GEOSE Superoxide dismutase [Mn] OS=Geobacillus stearothermophilus GN=sodA
PE=1 SV=2
Length = 204
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
F+L PYP +ALEPH+ K+T+ H KHH YV NLN + G KSLE+++ +
Sbjct: 3 FELPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLE 62
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
+ + NN NH FW + P GGG+P+GEL I + FGSF F +EF A
Sbjct: 63 ALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELADAINKKFGSFTAFKDEFSKA 122
Query: 168 AATQFGSGWAWLV 180
AA +FGSGWAWLV
Sbjct: 123 AAGRFGSGWAWLV 135
>sp|P28760|SODM_BACCA Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2
Length = 204
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
F+L PYP +ALEPH+ K+T+ H KHH YV NLN + G KSLE+++ +
Sbjct: 3 FELPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLE 62
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
+ + NN NH FW + P GGG+P+GEL I + FGSF F +EF A
Sbjct: 63 ALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELAEAINKKFGSFTAFKDEFSKA 122
Query: 168 AATQFGSGWAWLV 180
AA +FGSGWAWLV
Sbjct: 123 AAGRFGSGWAWLV 135
>sp|P22799|SODM_RAOPL Superoxide dismutase [Fe] (Fragment) OS=Raoultella planticola
GN=sodA PE=1 SV=3
Length = 170
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASY 109
++L PY +ALEPH+ T E H KHH YV NLN + GTE D K + D++
Sbjct: 3 YELPQLPYAYDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFAD-KDINDLIAML- 60
Query: 110 NKGDLLPA------FNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEE 163
D LPA NN NH FWE + PGG P GE+ I+ FGSF+ F EE
Sbjct: 61 ---DALPADKQTAVRNNGGGHANHTLFWEVIAPGGSNTPVGEVAKAIDAKFGSFDAFKEE 117
Query: 164 FKAAAATQFGSGWAWLV 180
F AA T+FGSGWAWL+
Sbjct: 118 FAKAATTRFGSGWAWLI 134
>sp|Q9KD10|SODM_BACHD Superoxide dismutase [Mn] OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=sodA PE=3 SV=1
Length = 202
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
F+L PYP NALEPH+ + T+ H GKHH YV LN + G KS+E +V +
Sbjct: 3 FELPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLD 62
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
+ + NN NH FW+ + P GGG P+GEL I +FGSF++F E+F A
Sbjct: 63 AVPENIRTAVRNNGGGHANHTLFWQILSPNGGGAPTGELADAINAEFGSFDQFKEKFADA 122
Query: 168 AATQFGSGWAWLV 180
AA +FGSGWAWLV
Sbjct: 123 AANRFGSGWAWLV 135
>sp|Q59094|SODM_ACIAD Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1)
GN=sodA PE=3 SV=1
Length = 228
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 81/139 (58%), Gaps = 7/139 (5%)
Query: 48 AKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV--V 105
A+F P PY NAL+P + + T+E H+GKHH+AYVDNLN QI D L +
Sbjct: 23 AEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQ 82
Query: 106 IASYNKGDLLPAFNNAAQAWNHDFFWESM-KPGGGGKPSGELLGLIERDFGSFEKFLEEF 164
I+ YN NN +NH FFWES+ G+PS L+ I +DFGS + F ++F
Sbjct: 83 ISKYNTA----VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKF 138
Query: 165 KAAAATQFGSGWAWLVSAP 183
AA+ +FGSGWAWL+ P
Sbjct: 139 NEAASGRFGSGWAWLIVTP 157
>sp|Q818I1|SODM1_BACCR Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=sodA1 PE=3 SV=1
Length = 218
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 76/128 (59%), Gaps = 4/128 (3%)
Query: 56 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVV--IASYNKG 112
PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V + +
Sbjct: 25 PYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVANLNEVPEA 83
Query: 113 DLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAAAATQF 172
NN NH FFW + P GGG+P GEL IE FGSF+ F EEF A AT+F
Sbjct: 84 IRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRF 143
Query: 173 GSGWAWLV 180
GSGWAWLV
Sbjct: 144 GSGWAWLV 151
>sp|P0C0F8|SODM_XANCP Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=sodA PE=3
SV=1
Length = 203
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
+ L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V +
Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLK 61
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
S + P NN NH FW M P GGG+P GE+ I++D G FEKF E F A
Sbjct: 62 SLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKA 121
Query: 168 AATQFGSGWAWLVSAP 183
A ++FGSGWAWL P
Sbjct: 122 ALSRFGSGWAWLSVTP 137
>sp|P0C0F9|SODM_XANC8 Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=sodA PE=3 SV=1
Length = 203
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 50 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IA 107
+ L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V +
Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLK 61
Query: 108 SYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFKAA 167
S + P NN NH FW M P GGG+P GE+ I++D G FEKF E F A
Sbjct: 62 SLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKA 121
Query: 168 AATQFGSGWAWLVSAP 183
A ++FGSGWAWL P
Sbjct: 122 ALSRFGSGWAWLSVTP 137
>sp|Q7SIC3|SODM_BACHA Superoxide dismutase [Mn] (Fragment) OS=Bacillus halodenitrificans
GN=sodA PE=1 SV=1
Length = 202
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Query: 48 AKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV-- 105
AKF+L PY +ALEP + K+T+ H KHH YV LN + G E KSL D++
Sbjct: 1 AKFELPELPYAYDALEPTIDKETMNIHHTKHHNTYVTKLNGALEGHEDLKNKSLNDLISN 60
Query: 106 IASYNKGDLLPAFNNAAQAWNHDFFWESMKPGGGGKPSGELLGLIERDFGSFEKFLEEFK 165
+ + + NN NH FW+ M P GGGKP+GE+ I +GSFEKF EEF
Sbjct: 61 LDAVPENIRTAVRNNGGGHANHSLFWKLMSPNGGGKPTGEVADKINDKYGSFEKFQEEFA 120
Query: 166 AAAATQFGSGWAWLV 180
AAAA +FGSGWAWLV
Sbjct: 121 AAAAGRFGSGWAWLV 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,420,950
Number of Sequences: 539616
Number of extensions: 3657312
Number of successful extensions: 8243
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7667
Number of HSP's gapped (non-prelim): 241
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)