BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029943
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis
GN=p20 PE=4 SV=1
Length = 178
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 20 ISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTSREQG---IKHIENKVI---PHPWFMA 73
++LR M+L D D + SD +VT + + P+T Q I+ I + + + + +
Sbjct: 9 LTLRKMELEDADVLCQYWSDPEVTKYMNITPFTDVSQARDMIQMINDLSLEGQANRFSII 68
Query: 74 ICVNNRAIGAISVSA-NQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLE 132
+ + IG + +Q N R EIGY LG +WGKG A+ AV+ D F +L
Sbjct: 69 VKETDEVIGTCGFNMIDQENG--RAEIGYDLGRNHWGKGFASEAVQKLIDYGFTSL-NLN 125
Query: 133 RLEALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLL 179
R+EA V+ EN S K+L F +EG+LR Y KG+ D MFSLL
Sbjct: 126 RIEAKVEPENTPSIKLLNSLSFQKEGLLRDYEKAKGRLIDVYMFSLL 172
>sp|O34569|YOAA_BACSU Uncharacterized N-acetyltransferase YoaA OS=Bacillus subtilis
(strain 168) GN=yoaA PE=3 SV=2
Length = 177
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 16 ELSDISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTSREQGIKHIENKVIPHP------ 69
E + LR + D + S+D+VT + S EQ I I+ +
Sbjct: 6 ETDRLILRQITDQDAEAIFACFSNDEVTRYYGLENMESIEQAISMIQTFAALYQEKRGIR 65
Query: 70 WFMAICVNNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWP 129
W + IG I A + R EIGY + ++W G A+ + F+
Sbjct: 66 WGIERRDTKELIGTIGFHALAQKHR-RAEIGYEIIPEHWRNGFASEVISKVVSYGFSALG 124
Query: 130 HLERLEALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLSTDPR 184
L R+ A+V +N S ++LLK GF +EGVLR+Y G DT ++S++ PR
Sbjct: 125 -LSRIGAVVFTDNEASNRLLLKMGFQKEGVLRQYMYQNGTPYDTNVYSIVK--PR 176
>sp|O31633|YJCK_BACSU Putative ribosomal-protein-alanine acetyltransferase OS=Bacillus
subtilis (strain 168) GN=yjcK PE=3 SV=1
Length = 181
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 20 ISLRPMDLSDVDDFMVWASDDK--VTHFC------SYGPYTSREQGIKHIENKVIPHPWF 71
I +RP++++D ++ + S+++ F Y R++ ++ E +
Sbjct: 7 IYVRPLEVTDAEENLGLQSENRDFFEQFSMIRADDYYTVEGQRKRITEYQERLEKDEEYH 66
Query: 72 MAICV--NNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWP 129
I ++R IG +S+ IGY L + GKGI T AV++ D F E
Sbjct: 67 FGIFTASDDRLIGTVSLFQIIRGALQTAFIGYFLDKAHNGKGIMTEAVRLVVDYAFHELK 126
Query: 130 HLERLEALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLSTD 182
L R+EA V N+GS +VL KAGF +EG+ RK G D + ++L+ D
Sbjct: 127 -LHRIEAGVMPRNLGSMRVLEKAGFHKEGIARKNVKINGVWEDHQVLAILNPD 178
>sp|P40586|YIW2_YEAST Uncharacterized protein YIR042C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YIR042C PE=4 SV=1
Length = 236
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 40 DKVTHFCSYGPYTSREQ---GIKHIENKVIPHPWFMAICVNNRAIGAIS-VSANQGNDKC 95
K+ + GP+T+ E+ IK + P+ + RA+G + + ++ N
Sbjct: 57 QKLWTYLPAGPFTNLEEYLEFIKELNETKDTVPFAIINKETERAVGTLCLIRIDEANGSL 116
Query: 96 RGEIGYVLGSKYWGKGI-ATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGF 154
E+GYV+ S K I AT A + +F + + R E D N S++ ++ GF
Sbjct: 117 --EVGYVVFSPELQKTIIATEAQFLLMKYVFDDLQY-RRYEWKCDSLNGPSRRAAMRLGF 173
Query: 155 MQEGVLRKYFIHKGKTRDTIMFSLLSTD 182
EG R+ ++KG+TRDT FS++ +
Sbjct: 174 KYEGTFRQVVVYKGRTRDTQWFSIIDKE 201
>sp|P0A951|ATDA_ECOLI Spermidine N(1)-acetyltransferase OS=Escherichia coli (strain K12)
GN=speG PE=1 SV=2
Length = 186
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 20 ISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTS----REQGIKHIENKVIPHPWFMAIC 75
+ LRP++ D+ ++ V + PY + + KHI ++ F+ C
Sbjct: 7 VKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQ--SERRFVVEC 64
Query: 76 VNNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLE 135
+A V N + R E ++ +Y GKG+ATRA K+A D F +L +L
Sbjct: 65 DGEKAGLVELVEINHVHR--RAEFQIIISPEYQGKGLATRAAKLAMDYGFTVL-NLYKLY 121
Query: 136 ALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLS 180
+VD EN + + K GF EG L F G+ R+ I +
Sbjct: 122 LIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQ 166
>sp|P0A952|ATDA_ECO57 Spermidine N(1)-acetyltransferase OS=Escherichia coli O157:H7
GN=speG PE=3 SV=2
Length = 186
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 20 ISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTS----REQGIKHIENKVIPHPWFMAIC 75
+ LRP++ D+ ++ V + PY + + KHI ++ F+ C
Sbjct: 7 VKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQ--SERRFVVEC 64
Query: 76 VNNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLE 135
+A V N + R E ++ +Y GKG+ATRA K+A D F +L +L
Sbjct: 65 DGEKAGLVELVEINHVHR--RAEFQIIISPEYQGKGLATRAAKLAMDYGFTVL-NLYKLY 121
Query: 136 ALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLS 180
+VD EN + + K GF EG L F G+ R+ I +
Sbjct: 122 LIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQ 166
>sp|P0DKR8|ATDA_WIGBR Spermidine N(1)-acetyltransferase OS=Wigglesworthia glossinidia
brevipalpis GN=speG PE=3 SV=1
Length = 174
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 96 RGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFM 155
R E ++ Y GKG A A K+A + F+ +L +L +VD N + + LK GF+
Sbjct: 84 RAEFQIIIDPNYQGKGYAVSATKLAINYAFS-ILNLYKLYLVVDESNEKAIHIYLKLGFI 142
Query: 156 QEGVLRKYFIHKGKTRDTIMFSLLSTD 182
EG L F GK RD I + +
Sbjct: 143 IEGRLIHEFFSNGKYRDVIRMCVFQNN 169
>sp|O31995|YOKL_BACSU SPBc2 prophage-derived uncharacterized N-acetyltransferase YokL
OS=Bacillus subtilis (strain 168) GN=yokL PE=3 SV=1
Length = 177
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 71 FMAICVNNRAIGAISVSANQGNDKCRGEIGYVLG--SKYWGKGIATRAVKMASDAIFAEW 128
F+A+ +N +G I D+ G GY L Y GKG A + M F E
Sbjct: 62 FIAVESDNNIVGMIETF---DCDRKNGTFGYYLAVFEPYRGKGFAKEMILMVLRFFFLEL 118
Query: 129 PHLERLEALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSL 178
+ +++ V N S ++ K GFM+EG LRK KG D I F +
Sbjct: 119 AY-QKVNTTVYSFNNPSIRLHEKLGFMKEGQLRKIIFTKGAYYDGICFGM 167
>sp|P0A950|RIMJ_SHIFL Ribosomal-protein-alanine acetyltransferase OS=Shigella flexneri
GN=rimJ PE=3 SV=1
Length = 194
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 99 IGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQEG 158
+GY +G K+ GKG+ A+ A+ H+ R+ A N S +L + GF +EG
Sbjct: 107 LGYSIGQKWQGKGLMFEAL-TAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEG 165
Query: 159 VLRKYFIHKGKTRDTIMFSLLSTD 182
+ Y + G+ RD ++ +L + D
Sbjct: 166 YAKDYLLIDGQWRDHVLTALTTPD 189
>sp|P0A948|RIMJ_ECOLI Ribosomal-protein-alanine acetyltransferase OS=Escherichia coli
(strain K12) GN=rimJ PE=3 SV=1
Length = 194
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 99 IGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQEG 158
+GY +G K+ GKG+ A+ A+ H+ R+ A N S +L + GF +EG
Sbjct: 107 LGYSIGQKWQGKGLMFEAL-TAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEG 165
Query: 159 VLRKYFIHKGKTRDTIMFSLLSTD 182
+ Y + G+ RD ++ +L + D
Sbjct: 166 YAKDYLLIDGQWRDHVLTALTTPD 189
>sp|P0A949|RIMJ_ECO57 Ribosomal-protein-alanine acetyltransferase OS=Escherichia coli
O157:H7 GN=rimJ PE=3 SV=1
Length = 194
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 99 IGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQEG 158
+GY +G K+ GKG+ A+ A+ H+ R+ A N S +L + GF +EG
Sbjct: 107 LGYSIGQKWQGKGLMFEAL-TAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEG 165
Query: 159 VLRKYFIHKGKTRDTIMFSLLSTD 182
+ Y + G+ RD ++ +L + D
Sbjct: 166 YAKDYLLIDGQWRDHVLTALTTPD 189
>sp|P96579|YDAF_BACSU Putative ribosomal N-acetyltransferase YdaF OS=Bacillus subtilis
(strain 168) GN=ydaF PE=1 SV=1
Length = 183
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 96 RGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFM 155
+ EIGY + ++ GKGI T A + F E L R+ V N S+ V + GF+
Sbjct: 93 KAEIGYWIAKEFEGKGIITAACRKLITYAFEEL-ELNRVAICAAVGNEKSRAVPERIGFL 151
Query: 156 QEGVLRKYFIHKGKTRDTIMFSLLSTD 182
+EG R G D + +SLL +
Sbjct: 152 EEGKARDGLYVNGMHHDLVYYSLLKRE 178
>sp|P49855|YKKB_BACSU Uncharacterized protein YkkB OS=Bacillus subtilis (strain 168)
GN=ykkB PE=4 SV=1
Length = 172
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 81 IGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDV 140
+G + Q ++ EIGY+ ++WG G A A + D F E ++ AL+D
Sbjct: 78 LGQCGIVPQQIENQTVMEIGYMFARRHWGNGYAQEAARACLDYGFNE-RQFGKMAALIDP 136
Query: 141 ENVGSQKVLLKAGFMQEGVLRKY 163
N S +V K G +RK+
Sbjct: 137 GNKASIRVAEKIGMHYSKTIRKW 159
>sp|P94482|YNAD_BACSU Uncharacterized N-acetyltransferase YnaD OS=Bacillus subtilis
(strain 168) GN=ynaD PE=3 SV=1
Length = 170
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 98 EIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQE 157
EIG+V Y KG A+ A + + F E +L R+ A EN+ S +V+ K G +E
Sbjct: 85 EIGWVFNPNYQNKGYASEAAQAILEYGFKE-MNLHRIIATCQPENIPSYRVMKKIGMRRE 143
Query: 158 GVLRKYFIHKGKTRDTIMFSLLSTD 182
G +K + D +++L +
Sbjct: 144 GFFKKCIPKGNEWWDEYYYAILEEE 168
>sp|P46854|YHHY_ECOLI Uncharacterized N-acetyltransferase YhhY OS=Escherichia coli
(strain K12) GN=yhhY PE=3 SV=1
Length = 162
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 72 MAICVNNRAIGAISVSANQGNDKCR-GEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPH 130
+ C++ +G +++ Q + + G + S++ +G+A+ A+ + W
Sbjct: 54 LVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVAS-ALMREMIEMCDNWLR 112
Query: 131 LERLEALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDT 173
++R+E V V+N + KV K GF EG +KY + G+ D
Sbjct: 113 VDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDA 155
>sp|P13857|RIML_ECOLI Ribosomal-protein-serine acetyltransferase OS=Escherichia coli
(strain K12) GN=rimL PE=1 SV=1
Length = 179
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 53 SREQGIKHIENKVIPHP-----WFMAICVNNRAIGAISVSANQGNDKCRGEIGYVLGSKY 107
S E K ++ V+ H FM I + IG IS + + +K EIGY L +
Sbjct: 47 SEEDTRKTVQGNVMLHQRGYAKMFM-IFKEDELIGVISFNRIEPLNKT-AEIGYWLDESH 104
Query: 108 WGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQEGVLRK 162
G+GI ++A++ A +A+ L R V+N S +V L+ GF+ EG L++
Sbjct: 105 QGQGIISQALQ-ALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQ 158
>sp|Q9I2H6|RIMJ_PSEAE Ribosomal-protein-alanine acetyltransferase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=rimJ PE=3 SV=1
Length = 189
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 99 IGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQEG 158
+G+ L + G+G+ RA+++A+ F E L R+ A N S+++L GF +EG
Sbjct: 106 LGFSLAAAAQGRGLMARALRVANRYCF-EQLGLHRIMASHLPRNARSERLLESLGFEKEG 164
Query: 159 VLRKYFIHKGKTRDTIMFSLLSTDPR 184
R Y G D ++ +L+ PR
Sbjct: 165 YARAYLKIAGVWEDHVLRALVDA-PR 189
>sp|Q03503|NAA30_YEAST N-alpha-acetyltransferase 30 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MAK3 PE=1 SV=1
Length = 176
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 69 PWFMAICVNNRA------IGAISVSAN-QGNDKCRGEIGYV-LGSKYWGKGIATRAVKMA 120
P I V+N++ IG I + N + RG IG + + S Y G GIA + V++A
Sbjct: 44 PELTYIAVDNKSGTPNIPIGCIVCKMDPHRNVRLRGYIGMLAVESTYRGHGIAKKLVEIA 103
Query: 121 SDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIM 175
D + E H + + +VEN + + GF++ + +Y++++G I+
Sbjct: 104 IDKMQRE--HCDEIMLETEVENSAALNLYEGMGFIRMKRMFRYYLNEGDAFKLIL 156
>sp|Q7VG78|GUAA_HELHP Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter
hepaticus (strain ATCC 51449 / 3B1) GN=guaA PE=3 SV=1
Length = 1375
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 98 EIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVDVENVGSQKVLLKAGFMQE 157
EIGY+L +WGKG + +M F E LE + L+ +N S KV + +
Sbjct: 404 EIGYLLHRDFWGKGYGSEVARMCVKYGF-ETLGLEEVYCLIKEDNTASIKVAKRLEMQKV 462
Query: 158 GVLRKYFIHKGKTRDTIMFSL 178
G K + KGK ++F L
Sbjct: 463 GEYPKPY--KGKKISHLVFRL 481
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 138 VDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLSTDPR 184
VD E+VG ++VLL +GF + K IH+ T +T +F LS R
Sbjct: 88 VDTEDVGDERVLLISGFPVQVCKAKAAIHQILTENTPVFEQLSVPQR 134
>sp|A0KMY1|DTPB_AERHH Dipeptide and tripeptide permease B OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=dtpB PE=3
SV=1
Length = 501
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 45 FCSYGPYTSREQGIKHIENKVIPHPWFMAICVNNRAIGAISVSA 88
FCS G T+ GI + + + PWFM + +++G + +SA
Sbjct: 355 FCSLGFLTAAASGIWFADAQGLTSPWFMVLIYLFQSLGELMISA 398
>sp|O94498|YBS8_SCHPO Uncharacterized N-acetyltransferase C18E5.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC18E5.08 PE=3 SV=1
Length = 186
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 71 FMAIC-VNNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWP 129
F +IC + N + +V ++ N + + +G YWG GIAT V + F
Sbjct: 83 FPSICYIGNVGLSKKNVKSDTAN------LFFEIGPLYWGMGIATECVGRVIE--FGSEN 134
Query: 130 HLERLEALVDVENVGSQKVLLKAGFMQEGVL 160
+++ + N S+KV LK GF G
Sbjct: 135 NIQNFIIDPIIGNEASKKVALKLGFEDSGTF 165
>sp|O06632|Y802_MYCTU Putative succinyl-CoA transferase Rv0802c OS=Mycobacterium
tuberculosis GN=Rv0802c PE=1 SV=1
Length = 218
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 72 MAICVNNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHL 131
+A+ V+ RA+G ++S+ + + G LG +Y G G T FAE
Sbjct: 82 LAVLVDGRAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAE---- 137
Query: 132 ERLEALVD-----VENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLSTD 182
LEA V V+N S V + G+ G+ R +G + ++F L D
Sbjct: 138 --LEAQVATSRSFVDNPASIAVSRRNGYRDNGLDR--VAREGAMAEALLFRLTRDD 189
>sp|A0R3F9|PAT_MYCS2 Acetyltransferase Pat OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_5458 PE=1 SV=1
Length = 333
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 80 AIGAISVSAN---QGNDKCRGEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEA 136
A+G + A +G++ E+ + +G Y G+GI + M + + A + ++R A
Sbjct: 213 ALGPVIADARFVREGHNATMAEVAFTVGDDYQGRGIGS--FLMGALIVSANYVGVQRFNA 270
Query: 137 LVDVENVGSQKVLLKAG 153
V +N+ +K++ + G
Sbjct: 271 RVLTDNMAMRKIMDRLG 287
>sp|P52284|MTR1_PBCVX Modification methylase CviRI OS=Paramecium bursaria Chlorella virus
XZ-6E GN=CVIRIM PE=3 SV=1
Length = 379
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 30 VDDFMVWASDDKVTHFCSYGPYTSREQGIKH 60
V DFM W +D+K PY +R G KH
Sbjct: 94 VHDFMTWDTDEKFDLIIGNPPYFTRPTGFKH 124
>sp|O28279|SAHH_ARCFU Adenosylhomocysteinase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ahcY
PE=3 SV=1
Length = 405
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 2 EDNSLASTIKEGDGELSD--ISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTSREQGIK 59
E S A +K E + I LR M+ V F V A +D T + Y + G
Sbjct: 124 EMESYAEKVKGASEETTTGVIRLRAMEREGVLKFPVIAVNDAYTKYLFDNRYGT---GQS 180
Query: 60 HIENKVIPHPWFMAICVNNRAIGAISVSANQGNDKCRGEIGYVLGSKYWGKGIATRAVKM 119
I+ + MA G+I V G + G+GIA RA M
Sbjct: 181 AIDGVIRATNLLMA-----------------------GKIVVVAGYGWCGRGIAMRARGM 217
Query: 120 ASDAIFAEWPHLERLEALVD 139
+ + E + LEA++D
Sbjct: 218 GASVVVTEVDEIRALEAVMD 237
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 138 VDVENVGSQKVLLKAGFMQEGVLRKYFIHKGKTRDTIMFSLLSTDPR 184
VD E+VG ++VLL +GF + K IH+ T +T + LS R
Sbjct: 88 VDTEDVGDERVLLISGFPVQVCKAKAAIHQILTENTPVSEQLSVPQR 134
>sp|Q4JAZ7|SAHH_SULAC Adenosylhomocysteinase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=ahcY PE=3 SV=1
Length = 415
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 97 GEIGYVLGSKYWGKGIATRAVKMASDAIFAEWPHLERLEALVD 139
G++ V+G + G+GIA+R M + I E LEAL+D
Sbjct: 204 GKVAVVIGYGWVGRGIASRFKGMGARVIVVESSPFRALEALMD 246
>sp|B2G9H2|GSA_LACRJ Glutamate-1-semialdehyde 2,1-aminomutase OS=Lactobacillus reuteri
(strain JCM 1112) GN=hemL PE=3 SV=1
Length = 431
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 20 ISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTSREQGIKHIENKVIP 67
+S P+ L DD +V D V SYG T +E + I NK++P
Sbjct: 62 LSWGPLILGHADDHVVAELDKAVAKGTSYGAPTLQETELAKIVNKIMP 109
>sp|A5VM65|GSA_LACRD Glutamate-1-semialdehyde 2,1-aminomutase OS=Lactobacillus reuteri
(strain DSM 20016) GN=hemL PE=3 SV=1
Length = 431
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 20 ISLRPMDLSDVDDFMVWASDDKVTHFCSYGPYTSREQGIKHIENKVIP 67
+S P+ L DD +V D V SYG T +E + I NK++P
Sbjct: 62 LSWGPLILGHADDHVVAELDKAVAKGTSYGAPTLQETELAKIVNKIMP 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,082,081
Number of Sequences: 539616
Number of extensions: 2725771
Number of successful extensions: 5027
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4992
Number of HSP's gapped (non-prelim): 33
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)