Query 029946
Match_columns 185
No_of_seqs 174 out of 1443
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:30:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029946.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029946hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 2.6E-45 9.1E-50 305.7 17.4 168 2-175 100-274 (340)
2 2w2e_A AQY1, aquaporin, aquapo 100.0 5E-45 1.7E-49 299.1 15.5 168 3-175 99-269 (279)
3 3gd8_A Aquaporin-4; proton exc 100.0 4.9E-45 1.7E-49 290.9 13.6 164 3-172 53-223 (223)
4 2zz9_A Aquaporin-4; water tran 100.0 6.1E-45 2.1E-49 300.7 13.1 167 3-175 62-235 (301)
5 2b6o_A Aquaporin-0, lens fiber 100.0 8.5E-44 2.9E-48 290.0 18.1 166 3-174 55-227 (263)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 1.7E-44 5.7E-49 294.3 13.0 167 3-175 57-231 (266)
7 1j4n_A Aquaporin 1; membrane p 100.0 3E-44 1E-48 293.8 12.9 166 3-174 65-237 (271)
8 2f2b_A Aquaporin AQPM; protein 100.0 5.4E-44 1.9E-48 288.9 14.2 166 3-171 69-245 (246)
9 2o9g_A Aquaporin Z; integral m 100.0 4.7E-44 1.6E-48 287.2 13.3 164 3-172 53-232 (234)
10 1ldf_A Glycerol uptake facilit 100.0 2.4E-44 8.3E-49 295.8 11.0 169 3-174 55-259 (281)
11 3cn5_A Aquaporin; membrane pro 100.0 2.3E-44 7.8E-49 297.9 9.2 169 3-174 111-291 (304)
12 3llq_A Aquaporin Z 2; aquapori 100.0 2.6E-43 8.8E-48 285.3 11.9 162 3-170 78-253 (256)
13 3c02_A Aquaglyceroporin; membr 100.0 7.6E-44 2.6E-48 289.7 8.0 172 3-177 57-249 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.7 2.9E-16 9.8E-21 127.6 11.8 101 71-173 8-111 (263)
15 3llq_A Aquaporin Z 2; aquapori 99.6 2.6E-15 9E-20 121.2 9.9 100 71-172 28-133 (256)
16 3c02_A Aquaglyceroporin; membr 99.6 2.7E-15 9.1E-20 121.6 9.9 105 71-177 8-117 (258)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.6 2.8E-15 9.6E-20 121.9 9.2 101 70-172 9-112 (266)
18 1ldf_A Glycerol uptake facilit 99.6 4.2E-15 1.4E-19 121.8 9.0 104 70-175 5-113 (281)
19 2zz9_A Aquaporin-4; water tran 99.6 1.1E-14 3.8E-19 120.0 11.5 103 70-174 10-119 (301)
20 3cn5_A Aquaporin; membrane pro 99.6 6.2E-15 2.1E-19 121.8 9.7 104 70-175 58-169 (304)
21 3gd8_A Aquaporin-4; proton exc 99.6 8.3E-15 2.8E-19 116.3 8.8 101 71-173 2-109 (223)
22 1j4n_A Aquaporin 1; membrane p 99.6 1.3E-14 4.4E-19 118.3 10.0 101 71-173 9-121 (271)
23 2o9g_A Aquaporin Z; integral m 99.6 7.6E-15 2.6E-19 117.4 8.3 100 72-173 4-109 (234)
24 2f2b_A Aquaporin AQPM; protein 99.6 1.6E-14 5.5E-19 116.3 10.1 101 71-173 3-125 (246)
25 3iyz_A Aquaporin-4; water tran 99.5 9.7E-15 3.3E-19 121.7 8.6 101 71-173 50-157 (340)
26 2w2e_A AQY1, aquaporin, aquapo 99.5 2E-14 6.7E-19 117.6 9.8 101 71-173 43-155 (279)
27 3s2u_A UDP-N-acetylglucosamine 51.5 4 0.00014 33.3 0.7 18 11-29 12-29 (365)
28 1ej8_A Lys7; beta barrel, copp 23.6 18 0.00061 25.9 0.1 9 11-19 68-76 (140)
29 3kcu_A Probable formate transp 22.7 2.8E+02 0.0097 21.8 11.9 70 24-95 99-184 (285)
30 1oal_A Superoxide dismutase; o 22.4 24 0.00082 25.5 0.6 9 11-19 66-74 (151)
31 2q2l_A Superoxide dismutase; S 22.0 28 0.00094 25.1 0.9 10 10-19 57-66 (152)
32 4a7u_A Superoxide dismutase [C 21.9 27 0.00092 25.2 0.8 9 11-19 59-67 (153)
33 2wyt_A Superoxide dismutase [C 21.6 28 0.00097 25.1 0.9 9 11-19 59-67 (153)
34 3pu7_A Superoxide dismutase [C 21.4 29 0.00098 25.1 0.9 9 11-19 59-67 (154)
35 1f1g_A Cuznsod, copper-zinc su 21.3 28 0.00095 25.1 0.8 10 10-19 59-68 (154)
36 3l9y_A Cu-znsod1, superoxide d 21.3 29 0.00099 25.1 0.9 9 11-19 58-66 (154)
37 3f7l_A Copper,zinc superoxide 21.3 28 0.00096 25.1 0.8 9 11-19 57-65 (152)
38 2e47_A EA4, TIME interVal meas 21.1 30 0.001 25.1 0.9 10 10-19 62-71 (156)
39 1to4_A Superoxide dismutase; b 20.9 29 0.00098 25.1 0.8 10 10-19 60-69 (156)
40 1do5_A Human copper chaperone 20.5 31 0.0011 24.9 0.9 10 10-19 59-68 (154)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-45 Score=305.68 Aligned_cols=168 Identities=26% Similarity=0.322 Sum_probs=149.6
Q ss_pred EEEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHH
Q 029946 2 FLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHG 75 (185)
Q Consensus 2 ~~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~ 75 (185)
..++++|+|| |||+|||||+++++.|++ +|++++.|+++|++||++|+++++.++++.. +.+.++.+..++
T Consensus 100 ~~v~~~g~IS-GAHlNPAVTlal~l~G~~--~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~ 176 (340)
T 3iyz_A 100 TMVQCFGHIS-GGHINPAVTVAMVCTRKI--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHG 176 (340)
T ss_pred HheeEeeccC-cCeeChHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHH
Confidence 4688999999 999999999999999999 9999999999999999999999999987642 234456788999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhh
Q 029946 76 ALTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLA 154 (185)
Q Consensus 76 ~~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~ 154 (185)
++.|+++||+|+++++++.+++.. .....|+.+|+++.++...++++||+++||||||||+++.+ .|.++|+||+|
T Consensus 177 f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvg 253 (340)
T 3iyz_A 177 LLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVG 253 (340)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHH
Confidence 999999999999999998874322 23467899999998888888899999999999999999876 79999999999
Q ss_pred hHHHHHHHHHHHHHhcCCchh
Q 029946 155 PIQATVIALWLFKLVVRPLAE 175 (185)
Q Consensus 155 p~~Ga~~a~~~~~~~~~~~~~ 175 (185)
|++|+++|+++|++++.+..+
T Consensus 254 PiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 254 PIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred HHHHHHHHHHHHHHHhCCChh
Confidence 999999999999999977654
No 2
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=5e-45 Score=299.07 Aligned_cols=168 Identities=19% Similarity=0.197 Sum_probs=149.9
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC---CCCCCCcchHHHHHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---RGPSLNVGIHHGALTE 79 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~~~s~~~~~~~E 79 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++.. ..|..+.+..++++.|
T Consensus 99 ~v~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E 175 (279)
T 2w2e_A 99 GVFITYRVS-GGNLNPAVTLALVLARAI--PPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLE 175 (279)
T ss_dssp HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHH
T ss_pred HHHHHhhcC-ccccChHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHH
Confidence 456789999 999999999999999999 9999999999999999999999999998752 2455567889999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhhHHHH
Q 029946 80 GLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQAT 159 (185)
Q Consensus 80 ~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga 159 (185)
+++||+|+++++.+.+++.+...+.|+.+|+++.++.++.++.||+++||||||||+++.+. .+.++|+||++|++|+
T Consensus 176 ~i~Tf~Lv~~Il~~~~~~~~~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~--~~~~~WVy~vgPiiGa 253 (279)
T 2w2e_A 176 AFGTAILCLTVLMLAVEKHRATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARS--FPNYHWIYWLGPILGA 253 (279)
T ss_dssp HHHHHHHHHHHHHHTTSCSTTGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTC--CCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhcc--chhhhhHHHHHHHHHH
Confidence 99999999999998875444556889999999999999999999999999999999999862 4568999999999999
Q ss_pred HHHHHHHHHhcCCchh
Q 029946 160 VIALWLFKLVVRPLAE 175 (185)
Q Consensus 160 ~~a~~~~~~~~~~~~~ 175 (185)
++++++|+++...+.+
T Consensus 254 ~la~~ly~~l~~~~~~ 269 (279)
T 2w2e_A 254 FLAYSIWQMWKWLNYQ 269 (279)
T ss_dssp HHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHccCCC
Confidence 9999999999765544
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-45 Score=290.91 Aligned_cols=164 Identities=26% Similarity=0.326 Sum_probs=145.6
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C--CCCCCCcchHHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGA 76 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~s~~~~~ 76 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.+++++ . ..+.++.+..+++
T Consensus 53 ~v~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~ 129 (223)
T 3gd8_A 53 MVQCFGHIS-GGHINPAVTVAMVCTRKI--SIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGL 129 (223)
T ss_dssp HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHH
T ss_pred HHheecccc-cceEcHHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHH
Confidence 356789999 999999999999999999 999999999999999999999999998753 1 2345577889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946 77 LTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP 155 (185)
Q Consensus 77 ~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p 155 (185)
+.|+++||+|+++++...|++.+ .....|+.+|+++......+++.||+++||||||+||++.+ .|+++|+||++|
T Consensus 130 ~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP 206 (223)
T 3gd8_A 130 LVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGP 206 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHH
Confidence 99999999999999998875432 23467999999998888887789999999999999999986 799999999999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 029946 156 IQATVIALWLFKLVVRP 172 (185)
Q Consensus 156 ~~Ga~~a~~~~~~~~~~ 172 (185)
++|+++++++|++++.|
T Consensus 207 ~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 207 IIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999998865
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=6.1e-45 Score=300.73 Aligned_cols=167 Identities=26% Similarity=0.331 Sum_probs=145.6
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGA 76 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~~ 76 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++.. +.+....+..+++
T Consensus 62 ~v~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f 138 (301)
T 2zz9_A 62 MVQCFGHIS-GGHINPAVTVAMVCTRKI--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGL 138 (301)
T ss_dssp HHHHHGGGT-CCCCSHHHHHHHHHTSSS--CTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHH
T ss_pred hhheeccCC-cceeChHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHH
Confidence 356789999 999999999999999999 9999999999999999999999999997641 2344567889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946 77 LTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP 155 (185)
Q Consensus 77 ~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p 155 (185)
+.|+++||+|+++++++.+++. ......|+.+|+++......++++||+++||||||||+++.+ .|.++|+||+||
T Consensus 139 ~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgP 215 (301)
T 2zz9_A 139 LVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGP 215 (301)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHH
Confidence 9999999999999999876432 223478999999998888888899999999999999999986 799999999999
Q ss_pred HHHHHHHHHHHHHhcCCchh
Q 029946 156 IQATVIALWLFKLVVRPLAE 175 (185)
Q Consensus 156 ~~Ga~~a~~~~~~~~~~~~~ 175 (185)
++|+++|+++|++++.+..+
T Consensus 216 iiGailaa~ly~~l~~~~~~ 235 (301)
T 2zz9_A 216 IIGAVLAGALYEYVFCPDVE 235 (301)
T ss_dssp HHHHHHHHHHHHTTTC----
T ss_pred HHHHHHHHHHHHHHhCCchh
Confidence 99999999999999876543
No 5
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=8.5e-44 Score=289.95 Aligned_cols=166 Identities=20% Similarity=0.302 Sum_probs=148.7
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------CCCCCCcchHHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGA 76 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~s~~~~~ 76 (185)
.++++|++| |||+|||||++.++.|++ +|++.+.|+++|++||++|+.+++.++++.. ..+.++.+..+++
T Consensus 55 ~i~~~g~iS-GahlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 131 (263)
T 2b6o_A 55 LVQAVGHIS-GAHVNPAVTFAFLVGSQM--SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQAT 131 (263)
T ss_dssp HHHHGGGTT-CCCCSHHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHH
T ss_pred HHHHhhccC-cCeeChHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHH
Confidence 356789999 999999999999999999 9999999999999999999999999997641 2344567889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946 77 LTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP 155 (185)
Q Consensus 77 ~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p 155 (185)
+.|+++||+|+++++.+.+++. ......|+.+|+++.++.+.++++||+++||||||||+++.+ .|+++|+||+||
T Consensus 132 ~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP 208 (263)
T 2b6o_A 132 IVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGP 208 (263)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHH
Confidence 9999999999999999977432 234578999999999999999999999999999999999976 899999999999
Q ss_pred HHHHHHHHHHHHHhcCCch
Q 029946 156 IQATVIALWLFKLVVRPLA 174 (185)
Q Consensus 156 ~~Ga~~a~~~~~~~~~~~~ 174 (185)
++|+++++++|++++.++.
T Consensus 209 ~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 209 VIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp HHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHHHHHHhCCcc
Confidence 9999999999999987654
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-44 Score=294.32 Aligned_cols=167 Identities=25% Similarity=0.299 Sum_probs=148.3
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C--CCCCCCcchHHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGA 76 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~s~~~~~ 76 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++. . ..+.++.+..+++
T Consensus 57 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~ 133 (266)
T 3d9s_A 57 LAQALGPVS-GGHINPAITLALLVGNQI--SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAM 133 (266)
T ss_dssp HHHHHHHHH-CCCCCHHHHHHHHHTSSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHH
T ss_pred HHHHHcccC-cceECHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHH
Confidence 456789999 999999999999999999 999999999999999999999999999752 1 2344567889999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCccc-chhHhhh
Q 029946 77 LTEGLLTFAIVTISLGLARKIP-GSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH-ILVYWLA 154 (185)
Q Consensus 77 ~~E~~~Tf~lv~~i~~~~~~~~-~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~-~~vy~v~ 154 (185)
+.|+++||+|+++++.+.|++. ......|+.+|+++.++.+.++++||+++||||||||+++.+ .|++ +|+||++
T Consensus 134 ~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vg 210 (266)
T 3d9s_A 134 VVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVG 210 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehH
Confidence 9999999999999999987432 234578999999999999999999999999999999999986 7888 9999999
Q ss_pred hHHHHHHHHHHHHHhcCCchh
Q 029946 155 PIQATVIALWLFKLVVRPLAE 175 (185)
Q Consensus 155 p~~Ga~~a~~~~~~~~~~~~~ 175 (185)
|++|+++++++|++++.++.+
T Consensus 211 P~~Ga~la~~~y~~l~~~~~~ 231 (266)
T 3d9s_A 211 PIVGAVLAAILYFYLLFPNSL 231 (266)
T ss_dssp HHHHHHHHHHHHHHTTSCCSC
T ss_pred HHHHHHHHHHHHHHHhCCCch
Confidence 999999999999999876543
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=3e-44 Score=293.79 Aligned_cols=166 Identities=19% Similarity=0.250 Sum_probs=145.6
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----C--CCCCCCcchHHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGA 76 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~s~~~~~ 76 (185)
.++++|+|| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++. . ..+.++.+..+++
T Consensus 65 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 141 (271)
T 1j4n_A 65 LAQSVGHIS-GAHLNPAVTLGLLLSCQI--SVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGL 141 (271)
T ss_dssp HHHHHHHHH-CCCCCHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGG
T ss_pred HHHHHhcCC-cceEcHHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHH
Confidence 356789999 999999999999999999 999999999999999999999999998642 1 1233466778899
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchhHhhhh
Q 029946 77 LTEGLLTFAIVTISLGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAP 155 (185)
Q Consensus 77 ~~E~~~Tf~lv~~i~~~~~~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~vy~v~p 155 (185)
+.|+++||+|++++++..+++.+ .....|+.+|+++......+++.||+++||||||||+++.+ .|+++|+||+||
T Consensus 142 ~~E~i~T~~Lv~~i~~~~d~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP 218 (271)
T 1j4n_A 142 GIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGP 218 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHH
Confidence 99999999999999998774322 24578999999999888887889999999999999999876 799999999999
Q ss_pred HHHHHHHHHHHHHhcCCch
Q 029946 156 IQATVIALWLFKLVVRPLA 174 (185)
Q Consensus 156 ~~Ga~~a~~~~~~~~~~~~ 174 (185)
++|+++++++|++++.++.
T Consensus 219 ~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 219 FIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp HHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 9999999999999987654
No 8
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=5.4e-44 Score=288.87 Aligned_cols=166 Identities=19% Similarity=0.184 Sum_probs=147.5
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------C--CCCCCCcchHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI------G--RGPSLNVGIHH 74 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~------~--~~~~~~~s~~~ 74 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.+++++ . ..|..+.+..+
T Consensus 69 ~v~~~g~iS-GaH~NPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~ 145 (246)
T 2f2b_A 69 SIYALGNIS-GCHINPAVTIGLWSVKKF--PGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQ 145 (246)
T ss_dssp HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHH
T ss_pred Hhheecccc-cceeCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHH
Confidence 456789999 999999999999999999 999999999999999999999999999862 1 23445778899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHH--Hh-CCCCCcccchhH
Q 029946 75 GALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAY--AR-GDHITKEHILVY 151 (185)
Q Consensus 75 ~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~--~~-~~~~~~~~~~vy 151 (185)
+++.|+++||+|+++++.+.+++.+.....|+.+|+++.++.++.+++||+++||||||+|++ .. ++++.|.|.|+|
T Consensus 146 ~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy 225 (246)
T 2f2b_A 146 AMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIY 225 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHH
T ss_pred HHHHHHHHHHHHHheeeEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEe
Confidence 999999999999999999876443334578999999999999999999999999999999999 33 446789999999
Q ss_pred hhhhHHHHHHHHHHHHHhcC
Q 029946 152 WLAPIQATVIALWLFKLVVR 171 (185)
Q Consensus 152 ~v~p~~Ga~~a~~~~~~~~~ 171 (185)
|++|++|+++++++|+.+++
T Consensus 226 ~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 226 VIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred eeHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999875
No 9
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=4.7e-44 Score=287.15 Aligned_cols=164 Identities=18% Similarity=0.309 Sum_probs=145.3
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--------------C--CC
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--------------R--GP 66 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------------~--~~ 66 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++.. + .|
T Consensus 53 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p 129 (234)
T 2o9g_A 53 MAFAVGHIS-GGHFNPAVTIGLWAGGRF--PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP 129 (234)
T ss_dssp HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGST
T ss_pred HHHHhhccC-cceeCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCC
Confidence 356789999 999999999999999999 9999999999999999999999999986421 0 12
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946 67 SLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE 146 (185)
Q Consensus 67 ~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~ 146 (185)
. +.+..++++.|+++||+|+++++...|++. .....|+.+|+++.++.+..++.||+++|||||||||++.+ +..|+
T Consensus 130 ~-~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~-~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~ 206 (234)
T 2o9g_A 130 G-GYSMLSALVVELVLSAGFLLVIHGATDKFA-PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALE 206 (234)
T ss_dssp T-CCCHHHHHHHHHHHHHHHHHHHHHHTSTTS-CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHH
T ss_pred C-ccchHHHHHHHHHHHHHHHHHHHHhcCCCC-ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCc
Confidence 2 567899999999999999999999887432 34578999999999999999999999999999999999986 34567
Q ss_pred cchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946 147 HILVYWLAPIQATVIALWLFKLVVRP 172 (185)
Q Consensus 147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~ 172 (185)
++|+||++|++|+++++++|++++.+
T Consensus 207 ~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 207 QLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred eeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999765
No 10
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2.4e-44 Score=295.85 Aligned_cols=169 Identities=17% Similarity=0.181 Sum_probs=145.5
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------------------
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------------------- 62 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------------------- 62 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++.
T Consensus 55 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 131 (281)
T 1ldf_A 55 AIYLTAGVS-GAHLNPAVTIALWLFACF--DKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDL 131 (281)
T ss_dssp HHHHHHHHH-CCCCSHHHHHHHHHHSCC--CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHH
T ss_pred HhheecccC-cCeeChHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccc
Confidence 456789999 999999999999999999 999999999999999999999999987531
Q ss_pred ----CCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCC--CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHH
Q 029946 63 ----GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWA 136 (185)
Q Consensus 63 ----~~~~~~~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~--~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~ 136 (185)
...|.++.+..++++.|+++||+|+++++.+.+++.+ ...+.|+.+|+++.++.+..++.||+++|||||||||
T Consensus 132 ~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 211 (281)
T 1ldf_A 132 AGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPK 211 (281)
T ss_dssp HTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred cceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHH
Confidence 0124456789999999999999999999999875432 2357899999999999999999999999999999999
Q ss_pred HHhC---C-CCCc------ccchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946 137 YARG---D-HITK------EHILVYWLAPIQATVIALWLFKLVVRPLA 174 (185)
Q Consensus 137 ~~~~---~-~~~~------~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~ 174 (185)
+++. + ...| .|+|+||++|++|+++++++|++++.++.
T Consensus 212 l~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~~ 259 (281)
T 1ldf_A 212 VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHL 259 (281)
T ss_dssp HHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCccC
Confidence 9861 2 1122 27999999999999999999999986654
No 11
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=2.3e-44 Score=297.86 Aligned_cols=169 Identities=18% Similarity=0.234 Sum_probs=147.8
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------CCCCCCCcchHHH
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------GRGPSLNVGIHHG 75 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------~~~~~~~~s~~~~ 75 (185)
.++++|+|| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++. ...+..+.+..++
T Consensus 111 ~v~~~g~iS-GaHlNPAVTla~~l~g~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~ 187 (304)
T 3cn5_A 111 LVYCTAGIS-GGHINPAVTFGLFLARKV--ELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTA 187 (304)
T ss_dssp HHHHHTTTT-CCCCSHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHH
T ss_pred eeeEeeccC-CCccCcHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHH
Confidence 456789999 999999999999999999 999999999999999999999999998642 1124456788999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC-CCc----chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccchh
Q 029946 76 ALTEGLLTFAIVTISLGLARKIP-GSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILV 150 (185)
Q Consensus 76 ~~~E~~~Tf~lv~~i~~~~~~~~-~~~----~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~~v 150 (185)
++.|+++||+|+++++...+++. ... .+.|+.+|+++.++.++.+++||+++||||||||+++..+...|+++|+
T Consensus 188 f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~Wv 267 (304)
T 3cn5_A 188 LGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWI 267 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEE
Confidence 99999999999999998776321 111 2789999999999999999999999999999999998543458999999
Q ss_pred HhhhhHHHHHHHHHHHHHhcCCch
Q 029946 151 YWLAPIQATVIALWLFKLVVRPLA 174 (185)
Q Consensus 151 y~v~p~~Ga~~a~~~~~~~~~~~~ 174 (185)
||++|++|+++++++|++++.+..
T Consensus 268 ywvgPiiGa~laa~~y~~l~~~~~ 291 (304)
T 3cn5_A 268 FWVGPFIGAAVAAAYHQYVLRAAA 291 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred EeehHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999987653
No 12
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.6e-43 Score=285.31 Aligned_cols=162 Identities=21% Similarity=0.295 Sum_probs=142.8
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------------C--CCCC
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------------R--GPSL 68 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------------~--~~~~ 68 (185)
.++++|+|| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++.. + .| .
T Consensus 78 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p-~ 153 (256)
T 3llq_A 78 MAYAVGGIS-GGHFNPAVSVGLTVAGRF--PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSP-G 153 (256)
T ss_dssp HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGST-T
T ss_pred HHheeeccc-cceEchHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCC-c
Confidence 457789999 999999999999999999 9999999999999999999999999885310 0 12 2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcccc
Q 029946 69 NVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHI 148 (185)
Q Consensus 69 ~~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~~ 148 (185)
..+..++++.|+++||+|+++++.+.+++. ...+.|+.+|+++.++.+..++.||+++|||||||||++.+ +..|+++
T Consensus 154 ~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~-~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~ 231 (256)
T 3llq_A 154 GYSLVSALLIEIILTAFFLIVILGSTHGRV-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQL 231 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHSTTS-CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcCCCC-CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccce
Confidence 467899999999999999999999887543 34578999999999999999999999999999999999986 2357799
Q ss_pred hhHhhhhHHHHHHHHHHHHHhc
Q 029946 149 LVYWLAPIQATVIALWLFKLVV 170 (185)
Q Consensus 149 ~vy~v~p~~Ga~~a~~~~~~~~ 170 (185)
|+||+||++|+++++++|+++.
T Consensus 232 WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 232 WLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999884
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=7.6e-44 Score=289.70 Aligned_cols=172 Identities=17% Similarity=0.171 Sum_probs=145.1
Q ss_pred EEeeecccccCcccChHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---C------C--CCCCCcc
Q 029946 3 LFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI---G------R--GPSLNVG 71 (185)
Q Consensus 3 ~i~~~g~is~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~------~--~~~~~~s 71 (185)
.++++|++| |||+|||||+++++.|++ +|++++.|+++|++||++|+.+++.++++. . . +.....+
T Consensus 57 ~i~~~g~iS-GaHlNPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p 133 (258)
T 3c02_A 57 GILVSAKLS-GAHLNLAVSIGLSSINKF--DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSIS 133 (258)
T ss_dssp HHHHHHHHH-CCCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSC
T ss_pred HHheecccC-cCeeChHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCc
Confidence 356789999 999999999999999999 999999999999999999999999998642 0 0 1122345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCC--CCcchh-HHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhC---CCCCc
Q 029946 72 IHHGALTEGLLTFAIVTISLGLARKIP--GSFYMK-TWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG---DHITK 145 (185)
Q Consensus 72 ~~~~~~~E~~~Tf~lv~~i~~~~~~~~--~~~~~~-~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~---~~~~~ 145 (185)
..++++.|+++||+|+++++.+.+++. ....+. |+.+|+++.++.+..++.||+++||||||||+++.+ +...|
T Consensus 134 ~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~ 213 (258)
T 3c02_A 134 LTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTF 213 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhcccccccc
Confidence 567999999999999999999987432 234577 999999999999999999999999999999999873 12234
Q ss_pred ----ccchhHhhhhHHHHHHHHHHHHHhcCCchhhh
Q 029946 146 ----EHILVYWLAPIQATVIALWLFKLVVRPLAEEK 177 (185)
Q Consensus 146 ----~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~~~ 177 (185)
.|+|+||++|++|+++++++|++++.++.+++
T Consensus 214 ~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~~~~ 249 (258)
T 3c02_A 214 TKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLVDLA 249 (258)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHC
T ss_pred ccCCceeehHHHHHHHHHHHHHHHHHHHhcccCCCc
Confidence 67999999999999999999999987665543
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.68 E-value=2.9e-16 Score=127.59 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=86.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCCC-Ccc--hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCccc
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLARKIPG-SFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH 147 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~-~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~~ 147 (185)
+..+.++.|+++|++|+++.+.+..+.+. ... ...+.+|+++++.+++.+++||+|+|||++++..+..+ .+|.+
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~--~~~~~ 85 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ--MSLLR 85 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTC--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcC--CCHHH
Confidence 56788999999999999999988763211 111 24688999999999999999999999999999999643 58999
Q ss_pred chhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 148 ILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 148 ~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
.|+||++|++|+++++.+.+.+++++
T Consensus 86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 86 AICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999998764
No 15
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.6e-15 Score=121.24 Aligned_cols=100 Identities=19% Similarity=0.225 Sum_probs=83.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhc--CC-CC-C-cc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCC
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLAR--KI-PG-S-FY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT 144 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~--~~-~~-~-~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~ 144 (185)
+..+.++.|+++|++|++..+++.. +. +. + .. ...+.+|+++++.+++.+++||+|+|||+|++..+..+ .+
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 105 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR--FP 105 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC--CC
Confidence 4678899999999999999888753 11 11 1 11 23588999999999999999999999999999998644 58
Q ss_pred cccchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946 145 KEHILVYWLAPIQATVIALWLFKLVVRP 172 (185)
Q Consensus 145 ~~~~~vy~v~p~~Ga~~a~~~~~~~~~~ 172 (185)
|.+.+.|+++|++|+++|+.+.+.+++.
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999888754
No 16
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.60 E-value=2.7e-15 Score=121.60 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=86.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcC----CCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCc
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLARK----IPGSFY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK 145 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~~----~~~~~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~ 145 (185)
+..+.++.|+++|++|++..+++..+ +..... ...+.+|+++++.+++.+++||+|+|||+|++..+..+ .+|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINK--FDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCC--CcH
Confidence 56788999999999999997765431 111112 24578899999999999999999999999999988644 589
Q ss_pred ccchhHhhhhHHHHHHHHHHHHHhcCCchhhh
Q 029946 146 EHILVYWLAPIQATVIALWLFKLVVRPLAEEK 177 (185)
Q Consensus 146 ~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~~~ 177 (185)
.+...|+++|++|+++|+.+.+.+++++.++.
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~ 117 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGFISNS 117 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchhhhhc
Confidence 99999999999999999999999987765533
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.59 E-value=2.8e-15 Score=121.89 Aligned_cols=101 Identities=20% Similarity=0.184 Sum_probs=85.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCCC--c-chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCcc
Q 029946 70 VGIHHGALTEGLLTFAIVTISLGLARKIPGS--F-YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE 146 (185)
Q Consensus 70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~~~~~--~-~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~~ 146 (185)
.+..+.++.|+++|++|++..+++..+.++. . ....+.+|+++++.+++.+++||+|+|||++++..+..+ .+|.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~~ 86 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ--ISLL 86 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSS--SCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcC--CCHH
Confidence 3567889999999999999999887532221 1 134689999999999999999999999999999998643 5899
Q ss_pred cchhHhhhhHHHHHHHHHHHHHhcCC
Q 029946 147 HILVYWLAPIQATVIALWLFKLVVRP 172 (185)
Q Consensus 147 ~~~vy~v~p~~Ga~~a~~~~~~~~~~ 172 (185)
+.+.|+++|++|+++|+.+.+.++++
T Consensus 87 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 87 RAFFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999864
No 18
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.58 E-value=4.2e-15 Score=121.84 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=85.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhc----CCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCC
Q 029946 70 VGIHHGALTEGLLTFAIVTISLGLAR----KIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT 144 (185)
Q Consensus 70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~----~~~~-~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~ 144 (185)
.+..+.++.|+++|++|++..+++.. ++.. +.....+.+|+++++.+++.+++||+|+|||+|++..+..+ .+
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 82 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FD 82 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCC--CC
Confidence 35678899999999999998876542 1211 22234688999999999999999999999999999998654 58
Q ss_pred cccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946 145 KEHILVYWLAPIQATVIALWLFKLVVRPLAE 175 (185)
Q Consensus 145 ~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~ 175 (185)
|.+...|+++|++|+++|+.+.+.+++++.+
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~ 113 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYNLFF 113 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999998877644
No 19
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.58 E-value=1.1e-14 Score=120.04 Aligned_cols=103 Identities=18% Similarity=0.220 Sum_probs=86.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCC---CC--Cc--chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCC
Q 029946 70 VGIHHGALTEGLLTFAIVTISLGLARKI---PG--SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH 142 (185)
Q Consensus 70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~~---~~--~~--~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~ 142 (185)
.+.++.++.||++|++|+++.+++.... .+ +. ....+.+|+++++.+++.+++||+|+|||+|++..+..+
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~-- 87 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK-- 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcC--
Confidence 4578899999999999999998876521 11 11 134688999999999999999999999999999988644
Q ss_pred CCcccchhHhhhhHHHHHHHHHHHHHhcCCch
Q 029946 143 ITKEHILVYWLAPIQATVIALWLFKLVVRPLA 174 (185)
Q Consensus 143 ~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~ 174 (185)
.+|.+...|+++|++|+++|+.+.+.++++..
T Consensus 88 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~ 119 (301)
T 2zz9_A 88 ISIAKSVFYITAQCLGAIIGAGILYLVTPPSV 119 (301)
T ss_dssp SCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 58999999999999999999999999887643
No 20
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.58 E-value=6.2e-15 Score=121.79 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=85.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcC----CC--CCc--chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCC
Q 029946 70 VGIHHGALTEGLLTFAIVTISLGLARK----IP--GSF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGD 141 (185)
Q Consensus 70 ~s~~~~~~~E~~~Tf~lv~~i~~~~~~----~~--~~~--~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~ 141 (185)
.+..+.++.|+++|++|+++.+++... +. .+. ....+.+|+.+++.+++.+++||+|+|||+|++..+..+
T Consensus 58 ~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~- 136 (304)
T 3cn5_A 58 WSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK- 136 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCC-
Confidence 356788999999999999998876431 11 111 124588999999999999999999999999999988654
Q ss_pred CCCcccchhHhhhhHHHHHHHHHHHHHhcCCchh
Q 029946 142 HITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 175 (185)
Q Consensus 142 ~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~~~ 175 (185)
.+|.+...|+++|++|+++|+.+.+.+++++.+
T Consensus 137 -~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~ 169 (304)
T 3cn5_A 137 -VELLRALVYMIAQCLGAICGVGLVKAFMKGPYN 169 (304)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 589999999999999999999999999876544
No 21
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.56 E-value=8.3e-15 Score=116.34 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=84.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcC---CCC--Cc--chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLARK---IPG--SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI 143 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~~---~~~--~~--~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~ 143 (185)
+.++.++.|+++|++|++..+++..+ +.+ +. ....+.+|+++++.+++.+++||+|+|||+|++..+..+ .
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~--~ 79 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 79 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCC--C
Confidence 35788999999999999999887652 111 11 134578999999999999999999999999999988643 5
Q ss_pred CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 144 TKEHILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
+|.+...|+++|++|+++++.+.+.+++++
T Consensus 80 ~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 80 SIAKSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 888999999999999999999998887654
No 22
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.56 E-value=1.3e-14 Score=118.34 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=83.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcC--------CCCC----cchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLARK--------IPGS----FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA 138 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~~--------~~~~----~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~ 138 (185)
+.++.++.|+++|++|++..+++... +... .....+.+|+.+++.+++.+++||+|+|||+|++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46788999999999999998876531 1111 12346889999999999999999999999999999986
Q ss_pred hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
.+ .+|.+...||++|++|+++|+.+.+.++.+.
T Consensus 89 g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 121 (271)
T 1j4n_A 89 CQ--ISVLRAIMYIIAQCVGAIVATAILSGITSSL 121 (271)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 44 5889999999999999999999999888543
No 23
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.56 E-value=7.6e-15 Score=117.36 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-CC-CCC---cc-hhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCCCc
Q 029946 72 IHHGALTEGLLTFAIVTISLGLAR-KI-PGS---FY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK 145 (185)
Q Consensus 72 ~~~~~~~E~~~Tf~lv~~i~~~~~-~~-~~~---~~-~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~~~ 145 (185)
..+.++.|+++|++|++..+++.. ++ .++ .. ...+.+|+++++.+++.+++||+|+|||+|++..+..+ .+|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR--FPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC--CCH
Confidence 578899999999999999887643 11 111 11 24588999999999999999999999999999988644 589
Q ss_pred ccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 146 EHILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 146 ~~~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
.+...|+++|++|+++|+.+.+.++++.
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999888754
No 24
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.55 E-value=1.6e-14 Score=116.26 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=83.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcC-----C-C-------CC-----c----chhHHHHHHHHHHHHHHhcCCCCCCcC
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLARK-----I-P-------GS-----F----YMKTWISSVSKLALHILGSDMTGGCMN 128 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~~-----~-~-------~~-----~----~~~~~~igl~v~~~~~~~~~~tG~~lN 128 (185)
+..+.++.|+++|++|++..+.+... + + .+ . ....+.+|+.+++.+++.+++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 56788999999999999998765421 1 0 01 0 014688999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 129 PASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 129 PA~~l~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
||+|++..+..+ .+|.+...|+++|++|+++|+.+.+.+++++
T Consensus 83 PAVTla~~~~g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 125 (246)
T 2f2b_A 83 PAVTIGLWSVKK--FPGREVVPYIIAQLLGAAFGSFIFLQCAGIG 125 (246)
T ss_dssp HHHHHHHHHTTS--SCGGGHHHHHHHHHHHHHHHHHHHHHHHCTH
T ss_pred HHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 999999988644 5899999999999999999999999998873
No 25
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.55 E-value=9.7e-15 Score=121.72 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=83.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcC---CCC----CcchhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHHhCCCC
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLARK---IPG----SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI 143 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~~~---~~~----~~~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~~~~~~ 143 (185)
+.++.++.||++||+|+++.+++..+ +.+ +.....+.+|+++++.+++.+++||+|+|||+|++..+..+ .
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~--~ 127 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 127 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCC--C
Confidence 45788999999999999998887652 111 11234688999999999999999999999999999988643 5
Q ss_pred CcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 144 TKEHILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 144 ~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
.|.....|+++|++|+++|+.+.+.++++.
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 889999999999999999999988887654
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.54 E-value=2e-14 Score=117.61 Aligned_cols=101 Identities=18% Similarity=0.109 Sum_probs=82.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhh---cCC-----CCCc----chhHHHHHHHHHHHHHHhcCCCCCCcChHHHHHHHHH
Q 029946 71 GIHHGALTEGLLTFAIVTISLGLA---RKI-----PGSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA 138 (185)
Q Consensus 71 s~~~~~~~E~~~Tf~lv~~i~~~~---~~~-----~~~~----~~~~~~igl~v~~~~~~~~~~tG~~lNPA~~l~~~~~ 138 (185)
+..+.++.|+++|++|++..++.. ... .+.. ....+.+|+++++.+++.+++||+|+|||+|++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456778999999999999877652 111 1111 1245789999999999999999999999999999886
Q ss_pred hCCCCCcccchhHhhhhHHHHHHHHHHHHHhcCCc
Q 029946 139 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 173 (185)
Q Consensus 139 ~~~~~~~~~~~vy~v~p~~Ga~~a~~~~~~~~~~~ 173 (185)
.+ .+|.+...|+++|++|+++|+.+.+.++++.
T Consensus 123 g~--~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RA--IPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 44 5889999999999999999999999988654
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.52 E-value=4 Score=33.35 Aligned_cols=18 Identities=28% Similarity=0.320 Sum_probs=15.5
Q ss_pred ccCcccChHHHHHHHHcCC
Q 029946 11 TKGGAYNPLTVLASGISGD 29 (185)
Q Consensus 11 s~Gah~NPavTla~~~~g~ 29 (185)
| |||++||++++-.+..+
T Consensus 12 T-gGHi~palala~~L~~~ 29 (365)
T 3s2u_A 12 T-GGHVFPALACAREFQAR 29 (365)
T ss_dssp S-HHHHHHHHHHHHHHHHT
T ss_pred C-HHHHHHHHHHHHHHHhC
Confidence 5 79999999999988743
No 28
>1ej8_A Lys7; beta barrel, copper chaperone for SOD, domain 2; 1.55A {Saccharomyces cerevisiae} SCOP: b.1.8.1
Probab=23.64 E-value=18 Score=25.87 Aligned_cols=9 Identities=11% Similarity=0.516 Sum_probs=6.8
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 68 SaG~HfnP~ 76 (140)
T 1ej8_A 68 STGKVWHKF 76 (140)
T ss_dssp GSCSEEEEC
T ss_pred cccCccCCC
Confidence 448999984
No 29
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=22.67 E-value=2.8e+02 Score=21.83 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=42.1
Q ss_pred HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHc---C----CCC--C-------CCCCCcchHHHHHHHHHHHHHHH
Q 029946 24 SGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTF---P----QIG--R-------GPSLNVGIHHGALTEGLLTFAIV 87 (185)
Q Consensus 24 ~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~---~----~~~--~-------~~~~~~s~~~~~~~E~~~Tf~lv 87 (185)
..+.||. +|++.+.-+..=.+|=++|+.+.-.+. + ++. . ....+.++.+.|+-=.++.++..
T Consensus 99 a~~~~~i--s~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVc 176 (285)
T 3kcu_A 99 AKASGRI--TWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVC 176 (285)
T ss_dssp HHTTTCC--CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 3557787 788777666655555555555543331 1 110 0 00124567888888888888888
Q ss_pred HHHHHhhc
Q 029946 88 TISLGLAR 95 (185)
Q Consensus 88 ~~i~~~~~ 95 (185)
+.++....
T Consensus 177 laVw~~~~ 184 (285)
T 3kcu_A 177 LAVWMSYS 184 (285)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 88876654
No 30
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=22.40 E-value=24 Score=25.45 Aligned_cols=9 Identities=44% Similarity=1.014 Sum_probs=7.5
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 66 SaGgHfnP~ 74 (151)
T 1oal_A 66 AAGGHYDPE 74 (151)
T ss_dssp GGCSBCCTT
T ss_pred cccCCcCCC
Confidence 459999997
No 31
>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}
Probab=21.99 E-value=28 Score=25.13 Aligned_cols=10 Identities=30% Similarity=0.757 Sum_probs=7.5
Q ss_pred cccCcccChH
Q 029946 10 VTKGGAYNPL 19 (185)
Q Consensus 10 is~Gah~NPa 19 (185)
.|-|+||||.
T Consensus 57 ~SaG~HfnP~ 66 (152)
T 2q2l_A 57 MSTGPHFNPA 66 (152)
T ss_dssp GGGCSBCCTT
T ss_pred ccccCccCCC
Confidence 3448999995
No 32
>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...
Probab=21.91 E-value=27 Score=25.19 Aligned_cols=9 Identities=44% Similarity=0.955 Sum_probs=6.9
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 59 SaGgHfnP~ 67 (153)
T 4a7u_A 59 SAGPHFNPL 67 (153)
T ss_dssp GGCSBCCTT
T ss_pred cccCeeccc
Confidence 448999994
No 33
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=21.58 E-value=28 Score=25.09 Aligned_cols=9 Identities=44% Similarity=0.955 Sum_probs=7.1
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 59 SaG~HfnP~ 67 (153)
T 2wyt_A 59 SAGPHFNPL 67 (153)
T ss_dssp GGCSBCCTT
T ss_pred cccCccCCC
Confidence 458999995
No 34
>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A
Probab=21.44 E-value=29 Score=25.11 Aligned_cols=9 Identities=33% Similarity=0.792 Sum_probs=7.0
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 59 SaGgHfnP~ 67 (154)
T 3pu7_A 59 STGAHFNPN 67 (154)
T ss_dssp GGCSBCCTT
T ss_pred ccccccCCc
Confidence 448999994
No 35
>1f1g_A Cuznsod, copper-zinc superoxide dismutase; nitric oxide, oxidoreductase; 1.35A {Saccharomyces cerevisiae} SCOP: b.1.8.1 PDB: 1f1a_A 1f18_A 1jcv_A 1b4l_A 1sdy_A 1yaz_A 1yso_A 2jcw_A 1f1d_A 1jk9_A 1b4t_A
Probab=21.35 E-value=28 Score=25.15 Aligned_cols=10 Identities=40% Similarity=0.906 Sum_probs=7.6
Q ss_pred cccCcccChH
Q 029946 10 VTKGGAYNPL 19 (185)
Q Consensus 10 is~Gah~NPa 19 (185)
.|-|+||||.
T Consensus 59 ~SaG~HfnP~ 68 (154)
T 1f1g_A 59 VSAGPHFNPF 68 (154)
T ss_dssp GGGCSBCCTT
T ss_pred hhccCccCCC
Confidence 3458999996
No 36
>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A
Probab=21.33 E-value=29 Score=25.05 Aligned_cols=9 Identities=33% Similarity=0.781 Sum_probs=6.9
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 58 SaGgHfnP~ 66 (154)
T 3l9y_A 58 SAGAHFNPE 66 (154)
T ss_dssp GGCSBCCTT
T ss_pred ccccccccc
Confidence 448999994
No 37
>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A
Probab=21.30 E-value=28 Score=25.10 Aligned_cols=9 Identities=44% Similarity=1.040 Sum_probs=6.9
Q ss_pred ccCcccChH
Q 029946 11 TKGGAYNPL 19 (185)
Q Consensus 11 s~Gah~NPa 19 (185)
|-|+||||.
T Consensus 57 SaGgHfnP~ 65 (152)
T 3f7l_A 57 SAGGHFNPH 65 (152)
T ss_dssp GGCSBCCTT
T ss_pred ccccccccc
Confidence 448999994
No 38
>2e47_A EA4, TIME interVal measuring enzyme TIME; motalloprotein, glycoprotein, metal binding protein; HET: NAG MAN; 2.11A {Bombyx mori} PDB: 2e46_A
Probab=21.08 E-value=30 Score=25.10 Aligned_cols=10 Identities=30% Similarity=0.777 Sum_probs=7.5
Q ss_pred cccCcccChH
Q 029946 10 VTKGGAYNPL 19 (185)
Q Consensus 10 is~Gah~NPa 19 (185)
.|-|+||||.
T Consensus 62 ~SaGgHfnP~ 71 (156)
T 2e47_A 62 LSTGSHFNPE 71 (156)
T ss_dssp GGGCSBCCTT
T ss_pred hhccCccCCC
Confidence 3458999995
No 39
>1to4_A Superoxide dismutase; beta-barrel, oxidoreductase; 1.55A {Schistosoma mansoni} SCOP: b.1.8.1 PDB: 1to5_A 3mnd_A
Probab=20.91 E-value=29 Score=25.14 Aligned_cols=10 Identities=30% Similarity=0.753 Sum_probs=7.4
Q ss_pred cccCcccChH
Q 029946 10 VTKGGAYNPL 19 (185)
Q Consensus 10 is~Gah~NPa 19 (185)
.|-|+||||.
T Consensus 60 ~SaG~HfnP~ 69 (156)
T 1to4_A 60 TSAGAHFNPT 69 (156)
T ss_dssp GGGCSBCCTT
T ss_pred hhccCcCCCC
Confidence 3448999995
No 40
>1do5_A Human copper chaperone for superoxide dismutase domain II; beta-barrel; 2.75A {Homo sapiens} SCOP: b.1.8.1
Probab=20.53 E-value=31 Score=24.91 Aligned_cols=10 Identities=30% Similarity=0.507 Sum_probs=7.6
Q ss_pred cccCcccChH
Q 029946 10 VTKGGAYNPL 19 (185)
Q Consensus 10 is~Gah~NPa 19 (185)
.|-|+||||.
T Consensus 59 ~SaG~HfnP~ 68 (154)
T 1do5_A 59 NSCGNHFNPD 68 (154)
T ss_dssp GTTCSBCCTT
T ss_pred ccCcCccCCC
Confidence 3458999996
Done!