Query 029948
Match_columns 185
No_of_seqs 112 out of 1097
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 09:34:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 99.9 9.2E-25 3.2E-29 186.2 16.3 149 8-163 13-164 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 99.9 3E-24 1E-28 184.1 14.9 167 1-169 1-171 (482)
3 2vch_A Hydroquinone glucosyltr 99.9 6.5E-21 2.2E-25 163.5 16.0 149 8-164 6-158 (480)
4 2acv_A Triterpene UDP-glucosyl 99.8 2E-19 6.9E-24 153.5 16.4 144 7-161 8-159 (463)
5 2c1x_A UDP-glucose flavonoid 3 99.8 1.5E-19 5.1E-24 154.1 15.5 155 1-162 1-158 (456)
6 2iya_A OLEI, oleandomycin glyc 99.7 6.4E-17 2.2E-21 135.5 13.4 127 8-148 12-141 (424)
7 4amg_A Snogd; transferase, pol 99.7 2.7E-16 9.4E-21 130.1 11.8 129 6-149 20-161 (400)
8 1iir_A Glycosyltransferase GTF 99.6 2.9E-15 1E-19 125.4 11.4 123 9-147 1-127 (415)
9 3ia7_A CALG4; glycosysltransfe 99.5 5.5E-14 1.9E-18 116.0 11.8 124 9-146 5-133 (402)
10 1rrv_A Glycosyltransferase GTF 99.5 4.5E-14 1.5E-18 118.1 10.1 124 9-147 1-128 (416)
11 2iyf_A OLED, oleandomycin glyc 99.5 2.1E-13 7.2E-18 114.0 12.3 126 8-147 7-135 (430)
12 3rsc_A CALG2; TDP, enediyne, s 99.5 8.2E-14 2.8E-18 115.9 9.2 126 7-147 19-150 (415)
13 3oti_A CALG3; calicheamicin, T 99.4 2.8E-12 9.4E-17 106.4 11.7 124 5-146 17-160 (398)
14 2p6p_A Glycosyl transferase; X 99.4 3E-12 1E-16 105.5 11.7 125 9-147 1-138 (384)
15 2yjn_A ERYCIII, glycosyltransf 99.4 1.1E-12 3.7E-17 110.5 9.1 127 7-147 19-175 (441)
16 3h4t_A Glycosyltransferase GTF 99.4 6E-13 2E-17 111.2 7.4 121 9-148 1-127 (404)
17 4fzr_A SSFS6; structural genom 99.3 4.7E-12 1.6E-16 104.9 8.5 129 5-147 12-154 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.3 1.3E-11 4.4E-16 101.8 9.4 126 8-147 1-145 (391)
19 3otg_A CALG1; calicheamicin, T 99.2 7.1E-11 2.4E-15 97.8 9.4 126 5-147 17-161 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.9 2.3E-08 7.8E-13 82.5 11.6 117 8-144 2-122 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 98.1 2.7E-05 9.3E-10 62.9 11.8 115 9-145 7-127 (364)
22 3fro_A GLGA glycogen synthase; 97.3 0.0049 1.7E-07 50.4 12.9 40 7-46 1-45 (439)
23 3c48_A Predicted glycosyltrans 96.9 0.0047 1.6E-07 50.8 8.9 41 6-46 18-69 (438)
24 2jjm_A Glycosyl transferase, g 94.9 0.69 2.4E-05 37.1 13.1 40 7-46 14-54 (394)
25 3okp_A GDP-mannose-dependent a 94.3 0.16 5.5E-06 40.6 8.0 109 7-145 3-117 (394)
26 1v4v_A UDP-N-acetylglucosamine 93.8 0.42 1.4E-05 38.2 9.4 37 9-46 6-43 (376)
27 1vgv_A UDP-N-acetylglucosamine 92.3 0.45 1.5E-05 38.0 7.5 35 9-44 1-36 (384)
28 2x0d_A WSAF; GT4 family, trans 92.0 0.11 3.9E-06 42.9 3.7 41 6-46 44-89 (413)
29 2iw1_A Lipopolysaccharide core 91.8 0.14 4.8E-06 40.7 4.0 38 9-46 1-41 (374)
30 2iuy_A Avigt4, glycosyltransfe 91.8 0.21 7.1E-06 39.4 5.0 39 8-46 3-57 (342)
31 1psw_A ADP-heptose LPS heptosy 91.8 1.4 4.8E-05 34.8 9.9 103 9-143 1-108 (348)
32 2r60_A Glycosyl transferase, g 91.5 0.17 5.9E-06 42.3 4.4 128 8-146 7-152 (499)
33 3vue_A GBSS-I, granule-bound s 91.4 0.24 8.2E-06 42.6 5.1 40 5-44 6-51 (536)
34 3beo_A UDP-N-acetylglucosamine 90.9 1.5 5.2E-05 34.7 9.3 38 8-46 8-47 (375)
35 2x6q_A Trehalose-synthase TRET 90.8 0.35 1.2E-05 39.2 5.4 40 7-46 39-80 (416)
36 3dzc_A UDP-N-acetylglucosamine 90.2 0.97 3.3E-05 37.0 7.6 112 6-144 23-142 (396)
37 3s28_A Sucrose synthase 1; gly 90.1 0.28 9.6E-06 44.5 4.6 110 27-145 318-438 (816)
38 2gek_A Phosphatidylinositol ma 89.3 0.44 1.5E-05 38.2 4.8 41 7-47 19-63 (406)
39 1rzu_A Glycogen synthase 1; gl 89.0 0.37 1.3E-05 40.0 4.2 38 9-46 1-44 (485)
40 2qzs_A Glycogen synthase; glyc 88.7 0.42 1.4E-05 39.7 4.3 38 9-46 1-44 (485)
41 3bfv_A CAPA1, CAPB2, membrane 85.4 8.4 0.00029 29.7 10.0 38 8-45 81-120 (271)
42 4hwg_A UDP-N-acetylglucosamine 85.0 2.2 7.7E-05 34.8 6.7 109 13-145 13-125 (385)
43 3ot5_A UDP-N-acetylglucosamine 84.8 2.5 8.6E-05 34.6 7.0 109 9-144 28-145 (403)
44 1y80_A Predicted cobalamin bin 83.9 2.1 7E-05 31.8 5.6 45 7-51 87-131 (210)
45 2yxb_A Coenzyme B12-dependent 83.8 1.4 4.8E-05 31.6 4.4 46 6-51 16-61 (161)
46 3cio_A ETK, tyrosine-protein k 83.5 9 0.00031 30.0 9.5 39 8-46 103-143 (299)
47 3la6_A Tyrosine-protein kinase 82.8 9 0.00031 29.8 9.2 39 8-46 91-131 (286)
48 3tov_A Glycosyl transferase fa 81.2 4.9 0.00017 32.2 7.3 106 7-143 7-117 (349)
49 2i2x_B MTAC, methyltransferase 80.8 2.8 9.5E-05 32.3 5.4 42 6-47 121-162 (258)
50 3ezx_A MMCP 1, monomethylamine 80.0 4.1 0.00014 30.6 6.0 46 6-51 90-135 (215)
51 1ccw_A Protein (glutamate muta 79.6 2.5 8.6E-05 29.3 4.4 44 8-51 3-46 (137)
52 2r8r_A Sensor protein; KDPD, P 78.2 4.1 0.00014 31.1 5.5 42 5-46 3-44 (228)
53 3zqu_A Probable aromatic acid 77.6 3 0.0001 31.3 4.5 43 8-51 4-46 (209)
54 3qjg_A Epidermin biosynthesis 77.1 3.8 0.00013 29.9 4.9 42 9-51 6-47 (175)
55 2lpm_A Two-component response 76.8 2.6 9E-05 28.7 3.7 31 115-145 52-87 (123)
56 1sbz_A Probable aromatic acid 76.8 2.9 9.9E-05 31.1 4.2 42 9-51 1-43 (197)
57 1mvl_A PPC decarboxylase athal 74.6 4.6 0.00016 30.3 4.8 42 8-51 19-60 (209)
58 3to5_A CHEY homolog; alpha(5)b 73.8 4.6 0.00016 27.8 4.4 34 115-148 56-98 (134)
59 3hbm_A UDP-sugar hydrolase; PS 71.6 14 0.00046 28.9 7.1 27 16-46 12-38 (282)
60 2hy7_A Glucuronosyltransferase 69.8 3.5 0.00012 33.6 3.5 38 6-45 12-52 (406)
61 3gl9_A Response regulator; bet 69.1 8.9 0.00031 24.8 4.9 34 115-148 45-87 (122)
62 3lqk_A Dipicolinate synthase s 67.4 7 0.00024 29.1 4.4 42 8-50 7-49 (201)
63 2ejb_A Probable aromatic acid 66.6 7.1 0.00024 28.7 4.3 43 9-52 2-44 (189)
64 4b4o_A Epimerase family protei 65.5 9.9 0.00034 29.1 5.2 31 9-43 1-31 (298)
65 1g63_A Epidermin modifying enz 65.2 6.7 0.00023 28.6 3.9 42 9-51 3-44 (181)
66 3oy2_A Glycosyltransferase B73 65.2 6.1 0.00021 31.6 4.0 37 9-46 1-40 (413)
67 3mcu_A Dipicolinate synthase, 64.3 7 0.00024 29.3 3.9 39 9-48 6-45 (207)
68 1pno_A NAD(P) transhydrogenase 63.8 7.3 0.00025 28.3 3.7 38 9-46 24-64 (180)
69 1lss_A TRK system potassium up 63.8 10 0.00034 25.2 4.4 33 8-45 4-36 (140)
70 1d4o_A NADP(H) transhydrogenas 63.3 7.6 0.00026 28.3 3.7 37 9-45 23-62 (184)
71 1id1_A Putative potassium chan 62.7 5 0.00017 27.7 2.7 33 8-45 3-35 (153)
72 1qzu_A Hypothetical protein MD 62.6 7.7 0.00026 28.9 3.9 43 8-51 19-62 (206)
73 1vi6_A 30S ribosomal protein S 62.6 6.6 0.00022 29.5 3.4 32 115-146 114-147 (208)
74 2fsv_C NAD(P) transhydrogenase 62.2 7.8 0.00027 28.7 3.7 38 9-46 47-87 (203)
75 2vqe_B 30S ribosomal protein S 62.2 7.4 0.00025 30.2 3.8 32 115-146 157-190 (256)
76 3t6k_A Response regulator rece 61.8 15 0.00052 24.2 5.0 33 115-147 47-88 (136)
77 1djl_A Transhydrogenase DIII; 61.6 8.2 0.00028 28.7 3.7 38 9-46 46-86 (207)
78 2bru_C NAD(P) transhydrogenase 61.3 8.3 0.00029 28.1 3.6 38 9-46 31-71 (186)
79 3vot_A L-amino acid ligase, BL 61.0 63 0.0021 26.1 9.5 35 7-46 4-38 (425)
80 3bch_A 40S ribosomal protein S 61.0 7.1 0.00024 30.2 3.4 32 115-146 150-183 (253)
81 3m6m_D Sensory/regulatory prot 60.5 12 0.00041 25.0 4.4 33 115-147 57-100 (143)
82 3lrx_A Putative hydrogenase; a 60.5 8.7 0.0003 27.0 3.7 37 8-47 23-59 (158)
83 2q5c_A NTRC family transcripti 60.3 22 0.00075 26.0 6.0 51 99-156 129-179 (196)
84 1p3y_1 MRSD protein; flavoprot 60.1 6 0.00021 29.2 2.8 42 8-50 8-49 (194)
85 3bul_A Methionine synthase; tr 59.8 14 0.00049 32.0 5.5 45 7-51 97-141 (579)
86 4hb9_A Similarities with proba 59.8 6.3 0.00022 31.3 3.2 30 8-42 1-30 (412)
87 2gt1_A Lipopolysaccharide hept 59.7 6.7 0.00023 30.6 3.2 43 9-51 1-45 (326)
88 1g5t_A COB(I)alamin adenosyltr 59.3 13 0.00043 27.6 4.5 38 7-44 27-64 (196)
89 3eag_A UDP-N-acetylmuramate:L- 57.9 11 0.00037 29.8 4.2 34 6-43 2-35 (326)
90 3lyu_A Putative hydrogenase; t 57.7 9.1 0.00031 26.4 3.3 37 8-47 18-54 (142)
91 2d1p_A TUSD, hypothetical UPF0 57.3 27 0.00092 24.2 5.7 41 6-46 10-54 (140)
92 3f6p_A Transcriptional regulat 56.2 21 0.00072 22.8 4.9 34 115-148 45-84 (120)
93 3kjh_A CO dehydrogenase/acetyl 55.2 8.9 0.00031 28.3 3.2 37 9-45 1-37 (254)
94 3bbn_B Ribosomal protein S2; s 54.7 8.1 0.00028 29.5 2.8 31 116-146 157-189 (231)
95 1mxh_A Pteridine reductase 2; 53.4 16 0.00053 27.7 4.3 33 9-44 11-43 (276)
96 3qxc_A Dethiobiotin synthetase 53.3 22 0.00075 27.0 5.1 35 9-43 21-57 (242)
97 2zkq_b 40S ribosomal protein S 52.3 13 0.00044 29.4 3.7 32 115-146 117-150 (295)
98 3ppi_A 3-hydroxyacyl-COA dehyd 51.1 21 0.0007 27.1 4.7 34 8-44 29-62 (281)
99 3kkj_A Amine oxidase, flavin-c 51.0 9.7 0.00033 27.4 2.7 17 26-42 15-31 (336)
100 1dbw_A Transcriptional regulat 50.8 36 0.0012 21.7 5.4 33 115-147 46-85 (126)
101 3j20_B 30S ribosomal protein S 50.6 12 0.00043 27.8 3.2 30 116-145 111-142 (202)
102 2vo1_A CTP synthase 1; pyrimid 50.1 21 0.0007 28.1 4.4 42 7-48 21-65 (295)
103 3l77_A Short-chain alcohol deh 49.1 21 0.00071 26.2 4.3 33 9-44 2-34 (235)
104 3op4_A 3-oxoacyl-[acyl-carrier 49.0 30 0.001 25.8 5.3 35 7-44 7-41 (248)
105 1dhr_A Dihydropteridine reduct 49.0 20 0.00068 26.5 4.3 33 9-44 7-39 (241)
106 3cf4_G Acetyl-COA decarboxylas 48.9 33 0.0011 24.2 5.2 28 115-143 35-68 (170)
107 3r8n_B 30S ribosomal protein S 48.5 12 0.0004 28.3 2.8 33 115-147 148-182 (218)
108 3gt7_A Sensor protein; structu 48.2 31 0.0011 23.1 4.9 33 115-147 50-91 (154)
109 4dll_A 2-hydroxy-3-oxopropiona 47.7 24 0.00083 27.6 4.7 33 8-45 31-63 (320)
110 3c3m_A Response regulator rece 47.7 35 0.0012 22.2 5.0 33 115-147 46-87 (138)
111 1kjn_A MTH0777; hypotethical p 47.4 20 0.00068 25.5 3.6 44 8-51 6-51 (157)
112 4dzz_A Plasmid partitioning pr 47.4 29 0.001 24.5 4.9 37 10-46 2-40 (206)
113 2g1u_A Hypothetical protein TM 47.4 22 0.00074 24.4 4.0 34 7-45 18-51 (155)
114 2xzm_B RPS0E; ribosome, transl 46.8 10 0.00034 29.2 2.2 32 115-146 113-146 (241)
115 2x5n_A SPRPN10, 26S proteasome 46.5 45 0.0015 24.2 5.7 34 11-44 110-143 (192)
116 2y0c_A BCEC, UDP-glucose dehyd 46.0 14 0.0005 31.0 3.3 35 6-45 6-40 (478)
117 1z82_A Glycerol-3-phosphate de 46.0 15 0.0005 29.0 3.2 34 7-45 13-46 (335)
118 2vsy_A XCC0866; transferase, g 45.7 30 0.001 28.9 5.3 40 6-45 203-246 (568)
119 4g6h_A Rotenone-insensitive NA 45.5 12 0.0004 31.6 2.6 35 7-46 41-75 (502)
120 3d3j_A Enhancer of mRNA-decapp 45.5 19 0.00063 28.6 3.7 34 9-45 133-168 (306)
121 3nhm_A Response regulator; pro 45.2 48 0.0016 21.2 5.4 33 115-147 46-87 (133)
122 2l2q_A PTS system, cellobiose- 45.1 34 0.0012 22.3 4.5 37 7-43 3-39 (109)
123 3ksu_A 3-oxoacyl-acyl carrier 44.7 29 0.001 26.1 4.7 33 8-43 10-42 (262)
124 3uf0_A Short-chain dehydrogena 44.7 33 0.0011 26.0 5.0 34 8-44 30-63 (273)
125 2gk4_A Conserved hypothetical 44.5 18 0.0006 27.6 3.2 22 25-46 32-53 (232)
126 1ks9_A KPA reductase;, 2-dehyd 44.3 18 0.00063 27.3 3.5 32 9-45 1-32 (291)
127 3u5c_A 40S ribosomal protein S 44.3 16 0.00056 28.1 3.1 30 116-145 117-148 (252)
128 3f67_A Putative dienelactone h 44.2 47 0.0016 23.5 5.6 35 10-44 33-67 (241)
129 2qr3_A Two-component system re 44.0 43 0.0015 21.6 5.0 33 115-147 46-90 (140)
130 1gz6_A Estradiol 17 beta-dehyd 44.0 35 0.0012 26.7 5.1 39 1-42 1-39 (319)
131 3sbx_A Putative uncharacterize 43.7 25 0.00084 25.8 3.9 36 6-41 11-49 (189)
132 2qzj_A Two-component response 43.6 44 0.0015 21.8 5.0 33 115-147 47-85 (136)
133 3grc_A Sensor protein, kinase; 43.6 42 0.0014 21.7 4.9 33 115-147 49-90 (140)
134 2pju_A Propionate catabolism o 43.5 63 0.0021 24.2 6.2 48 99-154 141-188 (225)
135 3h1g_A Chemotaxis protein CHEY 43.3 59 0.002 20.8 5.6 32 116-147 51-91 (129)
136 3cg0_A Response regulator rece 43.3 35 0.0012 22.1 4.4 33 116-148 54-93 (140)
137 3a10_A Response regulator; pho 43.1 57 0.0019 20.2 5.3 32 115-146 44-82 (116)
138 3hwr_A 2-dehydropantoate 2-red 43.0 17 0.00057 28.6 3.1 33 6-43 17-49 (318)
139 3o26_A Salutaridine reductase; 43.0 29 0.00098 26.4 4.4 35 8-45 11-45 (311)
140 4e5v_A Putative THUA-like prot 43.0 37 0.0012 26.4 5.0 39 6-45 2-43 (281)
141 1yde_A Retinal dehydrogenase/r 42.9 44 0.0015 25.2 5.5 34 8-44 8-41 (270)
142 3fwz_A Inner membrane protein 42.9 16 0.00053 24.8 2.6 36 6-46 5-40 (140)
143 2r85_A PURP protein PF1517; AT 42.9 27 0.00093 26.9 4.3 33 8-46 2-34 (334)
144 3p9x_A Phosphoribosylglycinami 42.9 38 0.0013 25.2 4.9 49 99-147 14-62 (211)
145 1tmy_A CHEY protein, TMY; chem 42.8 41 0.0014 21.1 4.6 33 116-148 47-86 (120)
146 3iqw_A Tail-anchored protein t 42.7 30 0.001 27.6 4.5 39 8-46 15-54 (334)
147 3of5_A Dethiobiotin synthetase 42.6 30 0.001 25.8 4.3 36 8-43 3-40 (228)
148 3ug7_A Arsenical pump-driving 42.5 40 0.0014 26.8 5.3 39 8-46 25-64 (349)
149 2rdm_A Response regulator rece 42.0 53 0.0018 20.9 5.1 32 116-147 50-89 (132)
150 3hv2_A Response regulator/HD d 41.8 40 0.0014 22.4 4.7 33 115-147 57-96 (153)
151 3hn2_A 2-dehydropantoate 2-red 41.8 23 0.00078 27.6 3.7 33 9-46 3-35 (312)
152 3icc_A Putative 3-oxoacyl-(acy 41.7 41 0.0014 24.8 5.0 34 9-45 7-40 (255)
153 2a9o_A Response regulator; ess 41.6 46 0.0016 20.7 4.7 33 116-148 45-83 (120)
154 3p0j_A Tyrosyl-tRNA synthetase 41.6 28 0.00096 30.9 4.5 44 4-47 378-426 (690)
155 2woo_A ATPase GET3; tail-ancho 41.5 35 0.0012 26.9 4.8 39 9-47 19-58 (329)
156 3ijr_A Oxidoreductase, short c 41.4 44 0.0015 25.5 5.3 35 8-45 46-80 (291)
157 3b2n_A Uncharacterized protein 41.4 37 0.0013 22.0 4.3 32 116-147 49-87 (133)
158 3zzm_A Bifunctional purine bio 41.3 78 0.0027 27.0 6.9 39 8-51 9-47 (523)
159 2pl1_A Transcriptional regulat 41.3 62 0.0021 20.1 5.3 34 115-148 43-83 (121)
160 2zat_A Dehydrogenase/reductase 41.3 50 0.0017 24.5 5.5 33 9-44 14-46 (260)
161 1pq4_A Periplasmic binding pro 41.3 56 0.0019 25.3 5.9 54 99-156 224-279 (291)
162 2hy5_A Putative sulfurtransfer 41.3 58 0.002 21.7 5.3 35 13-47 6-43 (130)
163 4e7p_A Response regulator; DNA 41.2 45 0.0015 22.0 4.8 43 101-147 55-104 (150)
164 3kvo_A Hydroxysteroid dehydrog 40.9 42 0.0014 26.6 5.2 35 7-44 43-77 (346)
165 1s1m_A CTP synthase; CTP synth 40.9 30 0.001 29.8 4.5 39 9-47 3-44 (545)
166 3rqi_A Response regulator prot 40.8 30 0.001 24.1 4.0 33 115-147 50-89 (184)
167 3fgn_A Dethiobiotin synthetase 40.7 36 0.0012 25.9 4.6 37 7-43 24-62 (251)
168 1vl8_A Gluconate 5-dehydrogena 40.5 38 0.0013 25.5 4.7 34 8-44 20-53 (267)
169 3of5_A Dethiobiotin synthetase 40.4 34 0.0012 25.5 4.3 46 99-149 97-152 (228)
170 3kht_A Response regulator; PSI 40.3 63 0.0022 21.0 5.4 33 115-147 50-91 (144)
171 4hp8_A 2-deoxy-D-gluconate 3-d 40.3 47 0.0016 25.3 5.1 42 1-45 1-42 (247)
172 3iz6_A 40S ribosomal protein S 40.2 26 0.00089 27.8 3.7 31 116-146 122-154 (305)
173 1zi8_A Carboxymethylenebutenol 40.2 57 0.002 22.9 5.5 34 10-43 29-62 (236)
174 1vco_A CTP synthetase; tetrame 40.2 31 0.0011 29.7 4.5 39 9-47 12-53 (550)
175 3ty2_A 5'-nucleotidase SURE; s 40.2 43 0.0015 25.9 4.9 43 5-49 8-50 (261)
176 1xhf_A DYE resistance, aerobic 40.0 57 0.002 20.4 5.0 34 115-148 46-85 (123)
177 2c5m_A CTP synthase; cytidine 40.0 24 0.00082 27.6 3.3 42 7-48 21-65 (294)
178 1fjh_A 3alpha-hydroxysteroid d 39.9 43 0.0015 24.7 4.9 32 10-44 2-33 (257)
179 2rjn_A Response regulator rece 39.9 42 0.0014 22.3 4.5 33 115-147 50-89 (154)
180 3eod_A Protein HNR; response r 39.8 44 0.0015 21.3 4.5 33 115-147 50-89 (130)
181 1meo_A Phosophoribosylglycinam 39.7 49 0.0017 24.5 5.1 47 100-146 13-59 (209)
182 1zmt_A Haloalcohol dehalogenas 39.6 30 0.001 25.7 4.0 32 9-43 1-32 (254)
183 1xrs_B D-lysine 5,6-aminomutas 39.6 21 0.00071 27.7 3.0 46 7-52 119-173 (262)
184 3ucx_A Short chain dehydrogena 39.5 44 0.0015 25.0 4.9 34 8-44 10-43 (264)
185 4a7p_A UDP-glucose dehydrogena 39.5 21 0.00073 29.7 3.3 35 6-45 6-40 (446)
186 1jx7_A Hypothetical protein YC 39.5 40 0.0014 21.7 4.2 29 20-48 16-46 (117)
187 3guy_A Short-chain dehydrogena 39.4 24 0.00083 25.8 3.4 34 9-45 1-34 (230)
188 4h15_A Short chain alcohol deh 39.3 42 0.0014 25.6 4.8 34 7-43 9-42 (261)
189 2ae2_A Protein (tropinone redu 39.3 48 0.0016 24.7 5.1 33 9-44 9-41 (260)
190 1byi_A Dethiobiotin synthase; 39.2 53 0.0018 23.6 5.2 32 11-42 4-36 (224)
191 3cu5_A Two component transcrip 39.0 46 0.0016 21.8 4.5 32 115-146 48-86 (141)
192 3dkr_A Esterase D; alpha beta 38.9 37 0.0013 23.9 4.3 35 9-44 23-57 (251)
193 4f0j_A Probable hydrolytic enz 38.9 39 0.0013 24.8 4.5 37 8-45 46-82 (315)
194 1tvm_A PTS system, galactitol- 38.9 70 0.0024 20.9 5.3 38 6-43 19-57 (113)
195 1srr_A SPO0F, sporulation resp 38.8 40 0.0014 21.3 4.1 32 116-147 47-85 (124)
196 3dfu_A Uncharacterized protein 38.8 25 0.00084 26.7 3.3 34 7-45 5-38 (232)
197 1p6q_A CHEY2; chemotaxis, sign 38.6 52 0.0018 20.8 4.7 32 115-146 50-90 (129)
198 1zgz_A Torcad operon transcrip 38.5 55 0.0019 20.5 4.7 33 115-147 45-83 (122)
199 3obb_A Probable 3-hydroxyisobu 38.4 27 0.00094 27.3 3.6 29 10-43 5-33 (300)
200 3pxx_A Carveol dehydrogenase; 38.3 49 0.0017 24.9 5.0 34 8-44 9-42 (287)
201 3imf_A Short chain dehydrogena 38.3 40 0.0014 25.1 4.5 34 8-44 5-38 (257)
202 3crn_A Response regulator rece 38.2 59 0.002 20.9 4.9 33 115-147 46-85 (132)
203 3lte_A Response regulator; str 38.2 66 0.0023 20.4 5.2 33 115-147 49-89 (132)
204 1mb3_A Cell division response 38.1 42 0.0014 21.1 4.1 31 116-146 45-84 (124)
205 3h7a_A Short chain dehydrogena 38.0 39 0.0013 25.2 4.4 33 9-44 7-39 (252)
206 4g65_A TRK system potassium up 37.9 9.1 0.00031 32.1 0.8 34 7-45 2-35 (461)
207 3pdi_B Nitrogenase MOFE cofact 37.9 40 0.0014 28.1 4.8 25 116-143 375-399 (458)
208 2qxy_A Response regulator; reg 37.9 49 0.0017 21.5 4.5 32 115-147 47-85 (142)
209 4gbj_A 6-phosphogluconate dehy 37.8 31 0.0011 26.9 3.8 29 10-43 7-35 (297)
210 2ew2_A 2-dehydropantoate 2-red 37.8 23 0.00077 27.1 3.1 32 9-45 4-35 (316)
211 3mc3_A DSRE/DSRF-like family p 37.6 56 0.0019 22.1 4.8 40 8-47 15-57 (134)
212 4g9b_A Beta-PGM, beta-phosphog 37.6 1.2E+02 0.004 22.1 8.4 94 25-145 100-194 (243)
213 3i83_A 2-dehydropantoate 2-red 37.6 23 0.0008 27.6 3.1 33 9-46 3-35 (320)
214 3g0o_A 3-hydroxyisobutyrate de 37.5 19 0.00064 27.9 2.5 34 7-45 6-39 (303)
215 1ooe_A Dihydropteridine reduct 37.4 40 0.0014 24.7 4.3 32 10-44 4-35 (236)
216 3s55_A Putative short-chain de 37.4 39 0.0013 25.5 4.3 34 8-44 9-42 (281)
217 4hn9_A Iron complex transport 37.4 46 0.0016 26.0 4.8 32 116-147 116-147 (335)
218 3o38_A Short chain dehydrogena 37.3 79 0.0027 23.4 6.1 35 8-45 21-56 (266)
219 1yio_A Response regulatory pro 37.2 48 0.0016 23.4 4.6 33 115-147 47-86 (208)
220 3pfb_A Cinnamoyl esterase; alp 37.2 76 0.0026 22.8 5.9 36 9-45 47-84 (270)
221 1mv8_A GMD, GDP-mannose 6-dehy 37.1 36 0.0012 27.9 4.3 31 9-44 1-31 (436)
222 1o97_C Electron transferring f 36.9 53 0.0018 25.2 5.0 30 116-145 112-147 (264)
223 3jte_A Response regulator rece 36.8 65 0.0022 20.8 5.0 33 115-147 48-87 (143)
224 3tjr_A Short chain dehydrogena 36.6 52 0.0018 25.3 5.0 35 8-45 30-64 (301)
225 3f1l_A Uncharacterized oxidore 36.6 60 0.0021 24.0 5.2 35 7-44 10-44 (252)
226 3v2h_A D-beta-hydroxybutyrate 36.6 41 0.0014 25.6 4.3 33 9-44 25-57 (281)
227 2jk1_A HUPR, hydrogenase trans 36.5 62 0.0021 20.9 4.8 33 115-147 43-82 (139)
228 3q9l_A Septum site-determining 36.3 49 0.0017 24.4 4.7 30 16-45 11-40 (260)
229 4iin_A 3-ketoacyl-acyl carrier 36.3 46 0.0016 25.0 4.6 33 9-44 29-61 (271)
230 3edm_A Short chain dehydrogena 36.2 43 0.0015 25.1 4.3 34 8-44 7-40 (259)
231 4fgs_A Probable dehydrogenase 36.2 48 0.0016 25.6 4.7 35 7-44 27-61 (273)
232 1wcv_1 SOJ, segregation protei 36.1 31 0.0011 25.8 3.5 39 8-46 5-45 (257)
233 1uxo_A YDEN protein; hydrolase 36.1 54 0.0019 22.4 4.7 38 8-45 4-42 (192)
234 3sju_A Keto reductase; short-c 36.0 39 0.0013 25.6 4.1 33 9-44 24-56 (279)
235 1d7o_A Enoyl-[acyl-carrier pro 36.0 53 0.0018 25.0 5.0 32 9-43 8-41 (297)
236 1e7w_A Pteridine reductase; di 36.0 45 0.0015 25.4 4.5 32 9-43 9-40 (291)
237 3fkq_A NTRC-like two-domain pr 36.0 46 0.0016 26.6 4.7 40 6-45 140-181 (373)
238 3f9i_A 3-oxoacyl-[acyl-carrier 35.8 52 0.0018 24.2 4.8 35 8-45 13-47 (249)
239 3k31_A Enoyl-(acyl-carrier-pro 35.8 79 0.0027 24.1 6.0 37 8-45 29-65 (296)
240 1jbe_A Chemotaxis protein CHEY 35.5 73 0.0025 20.0 5.0 33 115-147 48-89 (128)
241 3rkr_A Short chain oxidoreduct 35.5 47 0.0016 24.8 4.5 33 9-44 29-61 (262)
242 3q9s_A DNA-binding response re 35.5 62 0.0021 23.9 5.2 33 115-147 80-118 (249)
243 4eso_A Putative oxidoreductase 35.3 52 0.0018 24.5 4.7 34 8-44 7-40 (255)
244 4e3z_A Putative oxidoreductase 35.2 59 0.002 24.3 5.0 35 8-45 25-59 (272)
245 3sty_A Methylketone synthase 1 35.1 45 0.0015 23.9 4.3 37 7-44 11-47 (267)
246 4ds3_A Phosphoribosylglycinami 35.1 54 0.0018 24.3 4.6 47 100-146 20-66 (209)
247 3gvc_A Oxidoreductase, probabl 35.0 60 0.0021 24.6 5.1 34 9-45 29-62 (277)
248 3cz5_A Two-component response 34.8 83 0.0028 20.7 5.4 33 115-147 50-89 (153)
249 1x1t_A D(-)-3-hydroxybutyrate 34.7 50 0.0017 24.6 4.5 32 10-44 5-36 (260)
250 2raf_A Putative dinucleotide-b 34.6 33 0.0011 25.0 3.4 31 8-43 19-49 (209)
251 1imj_A CIB, CCG1-interacting f 34.5 98 0.0034 21.2 5.9 37 10-46 33-71 (210)
252 3hzh_A Chemotaxis response reg 34.5 55 0.0019 21.9 4.4 32 116-147 83-121 (157)
253 3l6e_A Oxidoreductase, short-c 34.5 46 0.0016 24.5 4.2 33 9-44 3-35 (235)
254 3cfy_A Putative LUXO repressor 34.4 55 0.0019 21.3 4.3 32 116-147 48-86 (137)
255 3qit_A CURM TE, polyketide syn 34.4 52 0.0018 23.5 4.5 36 9-45 27-62 (286)
256 3sc4_A Short chain dehydrogena 34.4 44 0.0015 25.4 4.2 34 8-44 8-41 (285)
257 3pgx_A Carveol dehydrogenase; 34.4 53 0.0018 24.8 4.7 33 8-43 14-46 (280)
258 1g3q_A MIND ATPase, cell divis 34.4 56 0.0019 23.7 4.7 36 11-46 5-41 (237)
259 1byi_A Dethiobiotin synthase; 34.3 55 0.0019 23.5 4.6 46 99-149 96-150 (224)
260 4dqx_A Probable oxidoreductase 34.3 47 0.0016 25.2 4.3 35 8-45 26-60 (277)
261 3c97_A Signal transduction his 34.3 86 0.0029 20.2 5.3 21 115-135 53-75 (140)
262 3pef_A 6-phosphogluconate dehy 34.3 37 0.0013 25.9 3.8 32 9-45 2-33 (287)
263 4dyv_A Short-chain dehydrogena 34.2 49 0.0017 25.1 4.4 34 8-44 27-60 (272)
264 3qha_A Putative oxidoreductase 34.2 25 0.00086 27.1 2.8 32 8-44 15-46 (296)
265 3grp_A 3-oxoacyl-(acyl carrier 34.2 51 0.0017 24.8 4.5 35 8-45 26-60 (266)
266 3uve_A Carveol dehydrogenase ( 34.2 46 0.0016 25.2 4.3 33 8-43 10-42 (286)
267 3io3_A DEHA2D07832P; chaperone 34.1 50 0.0017 26.4 4.6 40 7-46 16-58 (348)
268 4ao6_A Esterase; hydrolase, th 34.0 45 0.0016 24.7 4.2 38 8-45 55-94 (259)
269 3e61_A Putative transcriptiona 34.0 53 0.0018 24.3 4.6 33 115-147 63-96 (277)
270 3ew7_A LMO0794 protein; Q8Y8U8 34.0 27 0.00094 24.9 2.8 20 26-45 14-33 (221)
271 2hmt_A YUAA protein; RCK, KTN, 33.9 20 0.00067 23.7 1.9 32 9-45 7-38 (144)
272 3gem_A Short chain dehydrogena 33.9 35 0.0012 25.6 3.5 34 9-45 27-60 (260)
273 3gdg_A Probable NADP-dependent 33.8 69 0.0024 23.7 5.2 34 9-45 20-55 (267)
274 3kwp_A Predicted methyltransfe 33.8 95 0.0033 24.2 6.1 59 9-71 89-148 (296)
275 2etv_A Iron(III) ABC transport 33.8 48 0.0016 26.1 4.5 39 99-145 87-126 (346)
276 3nva_A CTP synthase; rossman f 33.8 55 0.0019 28.1 4.9 40 9-48 3-45 (535)
277 1txg_A Glycerol-3-phosphate de 33.8 22 0.00076 27.6 2.4 31 9-44 1-31 (335)
278 4g81_D Putative hexonate dehyd 33.7 57 0.002 24.8 4.7 34 7-43 7-40 (255)
279 3zq6_A Putative arsenical pump 33.6 48 0.0016 25.9 4.4 37 10-46 15-52 (324)
280 2ywr_A Phosphoribosylglycinami 33.6 71 0.0024 23.6 5.1 31 117-147 31-61 (216)
281 4egf_A L-xylulose reductase; s 33.6 53 0.0018 24.6 4.5 33 9-44 20-52 (266)
282 3lf2_A Short chain oxidoreduct 33.6 49 0.0017 24.7 4.3 34 8-44 7-40 (265)
283 3tqr_A Phosphoribosylglycinami 33.6 58 0.002 24.3 4.6 46 100-146 18-63 (215)
284 1bg6_A N-(1-D-carboxylethyl)-L 33.5 30 0.001 27.1 3.2 33 8-45 4-36 (359)
285 2qjw_A Uncharacterized protein 33.5 58 0.002 21.8 4.4 36 7-42 3-39 (176)
286 3tzq_B Short-chain type dehydr 33.4 50 0.0017 24.9 4.3 34 8-44 10-43 (271)
287 1p9o_A Phosphopantothenoylcyst 33.3 27 0.00091 27.8 2.8 23 25-47 68-90 (313)
288 3dii_A Short-chain dehydrogena 33.3 47 0.0016 24.6 4.1 32 10-44 3-34 (247)
289 3uxy_A Short-chain dehydrogena 33.2 47 0.0016 25.0 4.2 32 9-43 28-59 (266)
290 1kgs_A DRRD, DNA binding respo 33.2 72 0.0025 22.6 5.1 33 115-147 45-84 (225)
291 3ek2_A Enoyl-(acyl-carrier-pro 33.1 72 0.0024 23.6 5.2 36 8-45 13-49 (271)
292 3e8x_A Putative NAD-dependent 33.0 31 0.0011 25.2 3.0 21 25-45 34-54 (236)
293 3ak4_A NADH-dependent quinucli 33.0 66 0.0023 23.9 5.0 33 9-44 12-44 (263)
294 4fs3_A Enoyl-[acyl-carrier-pro 32.9 59 0.002 24.3 4.7 35 9-44 6-40 (256)
295 4gi5_A Quinone reductase; prot 32.9 92 0.0031 24.1 5.8 36 7-42 21-59 (280)
296 1zh2_A KDP operon transcriptio 32.8 63 0.0021 20.0 4.3 33 116-148 45-83 (121)
297 3qxc_A Dethiobiotin synthetase 32.8 52 0.0018 24.8 4.3 46 100-150 120-174 (242)
298 3orf_A Dihydropteridine reduct 32.7 49 0.0017 24.5 4.2 33 9-44 22-54 (251)
299 3t4x_A Oxidoreductase, short c 32.7 56 0.0019 24.5 4.5 34 9-45 10-43 (267)
300 1xx6_A Thymidine kinase; NESG, 32.7 67 0.0023 23.2 4.8 39 7-45 6-45 (191)
301 3sx2_A Putative 3-ketoacyl-(ac 32.7 59 0.002 24.4 4.7 33 8-43 12-44 (278)
302 3l4b_C TRKA K+ channel protien 32.7 15 0.00051 26.9 1.2 33 9-46 1-33 (218)
303 2p91_A Enoyl-[acyl-carrier-pro 32.7 70 0.0024 24.1 5.1 34 10-45 22-56 (285)
304 3rih_A Short chain dehydrogena 32.6 55 0.0019 25.2 4.5 34 9-45 41-74 (293)
305 2wtm_A EST1E; hydrolase; 1.60A 32.6 90 0.0031 22.4 5.6 33 10-43 29-63 (251)
306 3fgn_A Dethiobiotin synthetase 32.6 86 0.0029 23.8 5.5 35 115-149 125-169 (251)
307 4dmm_A 3-oxoacyl-[acyl-carrier 32.6 56 0.0019 24.6 4.5 33 9-44 28-60 (269)
308 1ydh_A AT5G11950; structural g 32.5 71 0.0024 23.8 4.9 32 10-41 11-46 (216)
309 3k9g_A PF-32 protein; ssgcid, 32.5 56 0.0019 24.3 4.5 38 7-45 25-64 (267)
310 2woj_A ATPase GET3; tail-ancho 32.3 49 0.0017 26.4 4.3 38 9-46 18-58 (354)
311 3h2s_A Putative NADH-flavin re 32.3 30 0.001 24.8 2.8 20 26-45 14-33 (224)
312 1boo_A Protein (N-4 cytosine-s 32.3 37 0.0013 26.7 3.5 47 100-152 241-289 (323)
313 1ys7_A Transcriptional regulat 32.2 75 0.0026 22.7 5.1 32 115-146 50-88 (233)
314 1u7z_A Coenzyme A biosynthesis 32.2 38 0.0013 25.5 3.4 21 25-45 37-57 (226)
315 1efv_B Electron transfer flavo 32.1 72 0.0025 24.4 5.0 31 116-146 116-152 (255)
316 3i1j_A Oxidoreductase, short c 32.0 77 0.0026 23.1 5.1 34 8-44 13-46 (247)
317 2qq5_A DHRS1, dehydrogenase/re 32.0 58 0.002 24.2 4.5 33 9-44 5-37 (260)
318 4fn4_A Short chain dehydrogena 31.9 55 0.0019 24.9 4.3 34 8-44 6-39 (254)
319 2h78_A Hibadh, 3-hydroxyisobut 31.8 42 0.0014 25.7 3.7 32 9-45 4-35 (302)
320 3av3_A Phosphoribosylglycinami 31.8 67 0.0023 23.7 4.7 32 116-147 32-63 (212)
321 3zv4_A CIS-2,3-dihydrobiphenyl 31.8 54 0.0019 24.8 4.3 33 9-44 5-37 (281)
322 3llv_A Exopolyphosphatase-rela 31.8 32 0.0011 22.9 2.7 32 9-45 7-38 (141)
323 4ibo_A Gluconate dehydrogenase 31.7 59 0.002 24.5 4.5 34 8-44 25-58 (271)
324 1gsa_A Glutathione synthetase; 31.7 46 0.0016 25.2 3.9 37 9-45 2-41 (316)
325 4iiu_A 3-oxoacyl-[acyl-carrier 31.6 70 0.0024 23.8 4.9 35 9-46 26-60 (267)
326 1w6u_A 2,4-dienoyl-COA reducta 31.6 99 0.0034 23.3 5.9 34 9-45 26-59 (302)
327 3rd5_A Mypaa.01249.C; ssgcid, 31.6 55 0.0019 24.8 4.4 34 9-45 16-49 (291)
328 4as2_A Phosphorylcholine phosp 31.5 36 0.0012 27.0 3.3 25 22-46 145-169 (327)
329 1zmo_A Halohydrin dehalogenase 31.5 49 0.0017 24.4 4.0 30 10-42 2-31 (244)
330 3kto_A Response regulator rece 31.4 67 0.0023 20.7 4.3 11 116-126 50-60 (136)
331 1jay_A Coenzyme F420H2:NADP+ o 31.4 33 0.0011 24.6 2.9 33 9-45 1-33 (212)
332 1i3c_A Response regulator RCP1 31.4 58 0.002 21.5 4.0 32 116-147 61-101 (149)
333 3dm5_A SRP54, signal recogniti 31.3 76 0.0026 26.4 5.3 40 8-47 100-139 (443)
334 2qyt_A 2-dehydropantoate 2-red 31.3 22 0.00077 27.3 2.0 33 7-44 7-45 (317)
335 1zk4_A R-specific alcohol dehy 31.3 75 0.0026 23.1 5.0 34 9-45 6-39 (251)
336 3qiv_A Short-chain dehydrogena 31.3 58 0.002 24.0 4.3 34 8-44 8-41 (253)
337 4eg0_A D-alanine--D-alanine li 31.2 95 0.0033 23.9 5.8 39 7-45 12-54 (317)
338 3end_A Light-independent proto 31.2 69 0.0024 24.5 4.9 36 10-45 43-78 (307)
339 2gkg_A Response regulator homo 31.2 65 0.0022 20.1 4.1 28 116-143 49-86 (127)
340 3ea0_A ATPase, para family; al 31.2 48 0.0016 24.2 3.8 38 9-46 4-44 (245)
341 3ged_A Short-chain dehydrogena 31.2 54 0.0018 24.8 4.1 33 10-45 3-35 (247)
342 3mm4_A Histidine kinase homolo 31.2 44 0.0015 23.9 3.6 32 116-147 119-161 (206)
343 3eul_A Possible nitrate/nitrit 31.1 57 0.0019 21.5 4.0 32 116-147 61-99 (152)
344 2rh8_A Anthocyanidin reductase 31.1 52 0.0018 25.3 4.2 29 12-43 12-40 (338)
345 1eg2_A Modification methylase 31.1 40 0.0014 26.6 3.5 42 100-147 231-274 (319)
346 1qkk_A DCTD, C4-dicarboxylate 31.1 57 0.002 21.6 4.0 33 115-147 46-85 (155)
347 1uls_A Putative 3-oxoacyl-acyl 31.1 58 0.002 24.0 4.3 32 10-44 6-37 (245)
348 3gaf_A 7-alpha-hydroxysteroid 31.0 47 0.0016 24.8 3.8 34 8-44 11-44 (256)
349 3vtz_A Glucose 1-dehydrogenase 31.0 68 0.0023 24.1 4.7 35 7-44 12-46 (269)
350 2j48_A Two-component sensor ki 31.0 77 0.0026 19.2 4.4 32 116-147 45-85 (119)
351 3pk0_A Short-chain dehydrogena 31.0 62 0.0021 24.2 4.5 34 8-44 9-42 (262)
352 1cp2_A CP2, nitrogenase iron p 30.9 61 0.0021 24.1 4.4 34 11-44 4-37 (269)
353 1jzt_A Hypothetical 27.5 kDa p 30.9 36 0.0012 25.9 3.1 33 9-44 59-93 (246)
354 3n0r_A Response regulator; sig 30.8 61 0.0021 24.8 4.5 32 115-146 204-242 (286)
355 3doj_A AT3G25530, dehydrogenas 30.7 35 0.0012 26.5 3.1 33 8-45 21-53 (310)
356 4imr_A 3-oxoacyl-(acyl-carrier 30.6 63 0.0021 24.4 4.5 34 8-44 32-65 (275)
357 1hxh_A 3BETA/17BETA-hydroxyste 30.6 74 0.0025 23.5 4.9 33 9-44 6-38 (253)
358 3m1a_A Putative dehydrogenase; 30.6 64 0.0022 24.2 4.5 33 9-44 5-37 (281)
359 3v8b_A Putative dehydrogenase, 30.6 58 0.002 24.7 4.3 34 9-45 28-61 (283)
360 3e03_A Short chain dehydrogena 30.5 59 0.002 24.5 4.3 33 9-44 6-38 (274)
361 2nwq_A Probable short-chain de 30.5 56 0.0019 24.7 4.2 32 10-44 22-53 (272)
362 4da9_A Short-chain dehydrogena 30.5 60 0.002 24.6 4.4 34 8-44 28-61 (280)
363 3pe6_A Monoglyceride lipase; a 30.4 61 0.0021 23.4 4.3 36 9-45 43-78 (303)
364 1jkx_A GART;, phosphoribosylgl 30.3 73 0.0025 23.6 4.7 48 100-147 13-60 (212)
365 3ezl_A Acetoacetyl-COA reducta 30.3 61 0.0021 23.9 4.3 34 7-43 11-44 (256)
366 1g0o_A Trihydroxynaphthalene r 30.3 64 0.0022 24.3 4.5 34 9-45 29-62 (283)
367 3rwb_A TPLDH, pyridoxal 4-dehy 30.3 71 0.0024 23.6 4.7 33 9-44 6-38 (247)
368 3hh1_A Tetrapyrrole methylase 30.2 37 0.0013 22.4 2.7 18 26-43 69-86 (117)
369 3tox_A Short chain dehydrogena 30.2 54 0.0018 24.9 4.1 33 8-43 7-39 (280)
370 3un1_A Probable oxidoreductase 30.2 65 0.0022 24.1 4.5 33 9-44 28-60 (260)
371 1efp_B ETF, protein (electron 30.1 70 0.0024 24.4 4.6 30 116-145 113-148 (252)
372 1f0y_A HCDH, L-3-hydroxyacyl-C 30.0 28 0.00096 26.8 2.4 32 9-45 16-47 (302)
373 1xu9_A Corticosteroid 11-beta- 30.0 65 0.0022 24.3 4.5 33 9-44 28-60 (286)
374 2fuk_A XC6422 protein; A/B hyd 29.9 1.1E+02 0.0038 21.1 5.6 36 8-43 37-76 (220)
375 3r0j_A Possible two component 29.9 64 0.0022 23.6 4.4 32 116-147 67-105 (250)
376 3v2g_A 3-oxoacyl-[acyl-carrier 29.9 62 0.0021 24.4 4.3 35 8-45 30-64 (271)
377 3ioy_A Short-chain dehydrogena 29.9 75 0.0026 24.6 4.9 33 9-44 8-40 (319)
378 1yb1_A 17-beta-hydroxysteroid 29.7 62 0.0021 24.2 4.3 34 9-45 31-64 (272)
379 2q8p_A Iron-regulated surface 29.7 79 0.0027 23.4 4.9 31 116-146 60-91 (260)
380 3qua_A Putative uncharacterize 29.7 1E+02 0.0035 22.7 5.3 35 7-41 21-58 (199)
381 2gf2_A Hibadh, 3-hydroxyisobut 29.7 45 0.0015 25.4 3.5 31 9-44 1-31 (296)
382 2pd6_A Estradiol 17-beta-dehyd 29.7 83 0.0029 23.1 5.0 33 10-45 8-40 (264)
383 4fc7_A Peroxisomal 2,4-dienoyl 29.6 77 0.0026 23.9 4.9 35 8-45 26-60 (277)
384 4b79_A PA4098, probable short- 29.6 65 0.0022 24.4 4.3 34 8-44 10-43 (242)
385 3eq2_A Probable two-component 29.5 56 0.0019 26.0 4.2 32 115-146 48-86 (394)
386 4ezb_A Uncharacterized conserv 29.5 36 0.0012 26.7 3.0 32 9-45 25-57 (317)
387 3cky_A 2-hydroxymethyl glutara 29.5 66 0.0023 24.4 4.5 32 8-44 4-35 (301)
388 1wma_A Carbonyl reductase [NAD 29.5 71 0.0024 23.5 4.6 34 9-45 4-38 (276)
389 3oec_A Carveol dehydrogenase ( 29.5 65 0.0022 24.9 4.5 32 9-43 46-77 (317)
390 1g60_A Adenine-specific methyl 29.3 47 0.0016 25.0 3.6 45 100-150 201-247 (260)
391 3hdg_A Uncharacterized protein 29.3 48 0.0017 21.3 3.3 32 116-147 51-89 (137)
392 3r3s_A Oxidoreductase; structu 29.3 63 0.0022 24.7 4.3 35 8-45 48-82 (294)
393 1yxm_A Pecra, peroxisomal tran 29.2 81 0.0028 23.9 5.0 33 9-44 18-50 (303)
394 2r25_B Osmosensing histidine p 29.2 69 0.0023 20.6 4.1 32 116-147 52-91 (133)
395 1hdo_A Biliverdin IX beta redu 29.2 37 0.0013 23.8 2.8 33 9-45 4-36 (206)
396 3d3k_A Enhancer of mRNA-decapp 29.1 38 0.0013 26.0 3.0 33 9-44 86-120 (259)
397 3n53_A Response regulator rece 29.1 46 0.0016 21.6 3.1 31 116-146 46-85 (140)
398 3oz2_A Digeranylgeranylglycero 29.1 33 0.0011 26.8 2.7 17 26-42 17-33 (397)
399 3i4f_A 3-oxoacyl-[acyl-carrier 29.0 92 0.0031 23.0 5.2 35 8-45 6-40 (264)
400 2d1p_B TUSC, hypothetical UPF0 29.0 1.1E+02 0.0037 20.1 5.0 34 13-46 7-42 (119)
401 4fbl_A LIPS lipolytic enzyme; 29.0 44 0.0015 24.9 3.4 32 11-43 54-85 (281)
402 1qsg_A Enoyl-[acyl-carrier-pro 28.9 92 0.0032 23.1 5.2 33 10-44 10-43 (265)
403 2nm0_A Probable 3-oxacyl-(acyl 28.9 67 0.0023 23.9 4.4 32 9-43 21-52 (253)
404 3lyl_A 3-oxoacyl-(acyl-carrier 28.8 87 0.003 22.8 5.0 34 9-45 5-38 (247)
405 3tl3_A Short-chain type dehydr 28.8 47 0.0016 24.6 3.5 33 9-44 9-41 (257)
406 3auf_A Glycinamide ribonucleot 28.7 68 0.0023 24.1 4.3 32 116-147 51-82 (229)
407 3u7q_A Nitrogenase molybdenum- 28.6 58 0.002 27.4 4.3 24 116-142 417-440 (492)
408 2pd4_A Enoyl-[acyl-carrier-pro 28.6 84 0.0029 23.5 4.9 33 10-44 7-40 (275)
409 1vl0_A DTDP-4-dehydrorhamnose 28.5 37 0.0013 25.5 2.9 25 17-43 19-43 (292)
410 2rhc_B Actinorhodin polyketide 28.5 1.2E+02 0.004 22.8 5.8 32 10-44 23-54 (277)
411 3ghy_A Ketopantoate reductase 28.5 32 0.0011 27.0 2.6 33 8-45 3-35 (335)
412 4dry_A 3-oxoacyl-[acyl-carrier 28.5 67 0.0023 24.4 4.3 34 8-44 32-65 (281)
413 1geg_A Acetoin reductase; SDR 28.4 64 0.0022 23.9 4.2 32 10-44 3-34 (256)
414 2x4g_A Nucleoside-diphosphate- 28.3 92 0.0031 23.8 5.2 32 9-44 14-45 (342)
415 3t7c_A Carveol dehydrogenase; 28.2 87 0.003 23.9 5.0 33 8-43 27-59 (299)
416 3gi1_A LBP, laminin-binding pr 28.2 75 0.0026 24.5 4.6 43 99-145 215-259 (286)
417 2ts1_A Tyrosyl-tRNA synthetase 28.2 51 0.0017 27.3 3.8 36 10-46 34-72 (419)
418 3h5i_A Response regulator/sens 28.1 1.2E+02 0.004 19.6 5.1 32 115-146 49-87 (140)
419 1xkq_A Short-chain reductase f 28.1 95 0.0032 23.3 5.2 33 9-44 6-38 (280)
420 3c3w_A Two component transcrip 28.0 55 0.0019 23.6 3.7 32 116-147 47-85 (225)
421 3heb_A Response regulator rece 28.0 1.3E+02 0.0044 19.6 5.8 33 115-147 58-99 (152)
422 3is3_A 17BETA-hydroxysteroid d 28.0 88 0.003 23.4 4.9 35 8-45 17-51 (270)
423 3gg2_A Sugar dehydrogenase, UD 27.9 39 0.0013 28.1 3.1 32 9-45 3-34 (450)
424 2fx5_A Lipase; alpha-beta hydr 27.9 54 0.0019 23.9 3.6 37 9-45 49-85 (258)
425 4dad_A Putative pilus assembly 27.9 54 0.0019 21.4 3.4 32 116-147 67-105 (146)
426 2o8n_A APOA-I binding protein; 27.8 49 0.0017 25.6 3.4 34 9-45 80-115 (265)
427 3tsc_A Putative oxidoreductase 27.7 70 0.0024 24.0 4.3 33 8-43 10-42 (277)
428 2ph1_A Nucleotide-binding prot 27.6 83 0.0028 23.4 4.7 37 10-46 20-57 (262)
429 2w36_A Endonuclease V; hypoxan 27.5 23 0.00078 26.9 1.4 45 99-148 91-142 (225)
430 3rm3_A MGLP, thermostable mono 27.5 69 0.0023 23.1 4.2 36 8-44 40-75 (270)
431 3p19_A BFPVVD8, putative blue 27.5 64 0.0022 24.2 4.0 33 9-44 16-48 (266)
432 3d59_A Platelet-activating fac 27.5 63 0.0022 25.5 4.2 38 8-45 97-134 (383)
433 3rot_A ABC sugar transporter, 27.4 1.2E+02 0.004 22.7 5.6 32 115-146 60-95 (297)
434 1mvo_A PHOP response regulator 27.3 91 0.0031 19.8 4.4 31 116-146 47-84 (136)
435 2afh_E Nitrogenase iron protei 27.3 78 0.0027 23.9 4.5 34 11-44 5-38 (289)
436 2ptg_A Enoyl-acyl carrier redu 27.3 90 0.0031 24.0 5.0 32 9-43 9-42 (319)
437 1ep3_B Dihydroorotate dehydrog 27.3 48 0.0016 24.9 3.3 35 8-44 110-144 (262)
438 1a04_A Nitrate/nitrite respons 27.2 69 0.0023 22.7 4.0 31 116-146 51-88 (215)
439 3l18_A Intracellular protease 27.2 1.5E+02 0.0051 20.2 6.1 38 8-46 2-39 (168)
440 3pdu_A 3-hydroxyisobutyrate de 27.0 51 0.0018 25.1 3.4 32 9-45 2-33 (287)
441 3nyw_A Putative oxidoreductase 27.0 60 0.002 24.1 3.8 33 9-44 7-39 (250)
442 2oqr_A Sensory transduction pr 27.0 78 0.0027 22.6 4.3 32 116-147 48-85 (230)
443 3uce_A Dehydrogenase; rossmann 26.9 56 0.0019 23.6 3.5 32 9-43 6-37 (223)
444 3ftp_A 3-oxoacyl-[acyl-carrier 26.9 1.3E+02 0.0044 22.6 5.7 35 8-45 27-61 (270)
445 3r1i_A Short-chain type dehydr 26.9 95 0.0033 23.4 5.0 33 9-44 32-64 (276)
446 3tfo_A Putative 3-oxoacyl-(acy 26.9 80 0.0027 23.7 4.5 32 10-44 5-36 (264)
447 3bjr_A Putative carboxylestera 26.7 1.2E+02 0.0041 22.2 5.5 36 8-43 50-87 (283)
448 1y42_X Tyrosyl-tRNA synthetase 26.6 42 0.0014 27.5 3.0 35 11-46 69-106 (392)
449 3svt_A Short-chain type dehydr 26.4 77 0.0026 23.8 4.3 33 9-44 11-43 (281)
450 2dpo_A L-gulonate 3-dehydrogen 26.3 41 0.0014 26.5 2.8 33 8-45 6-38 (319)
451 1xhl_A Short-chain dehydrogena 26.3 1.1E+02 0.0036 23.4 5.2 33 9-44 26-58 (297)
452 1kjq_A GART 2, phosphoribosylg 26.2 1.5E+02 0.005 23.4 6.2 40 2-46 4-44 (391)
453 1iow_A DD-ligase, DDLB, D-ALA\ 26.2 1.2E+02 0.0041 22.8 5.5 38 8-45 2-43 (306)
454 3ego_A Probable 2-dehydropanto 26.1 37 0.0013 26.4 2.5 33 8-46 2-34 (307)
455 2xxa_A Signal recognition part 26.0 1.2E+02 0.004 25.0 5.6 39 9-47 101-140 (433)
456 3fwy_A Light-independent proto 26.0 92 0.0031 24.4 4.8 38 8-45 47-85 (314)
457 3kcq_A Phosphoribosylglycinami 26.0 75 0.0026 23.6 4.0 47 100-146 21-67 (215)
458 2xdo_A TETX2 protein; tetracyc 25.9 53 0.0018 26.1 3.4 31 8-43 26-56 (398)
459 2qhx_A Pteridine reductase 1; 25.9 83 0.0028 24.5 4.5 31 10-43 47-77 (328)
460 3g79_A NDP-N-acetyl-D-galactos 25.8 72 0.0025 26.8 4.3 34 7-45 17-52 (478)
461 1n2z_A Vitamin B12 transport p 25.8 1.1E+02 0.0036 22.5 5.0 40 99-146 48-89 (245)
462 3gk3_A Acetoacetyl-COA reducta 25.8 97 0.0033 23.1 4.8 34 9-45 25-58 (269)
463 2jzc_A UDP-N-acetylglucosamine 25.7 81 0.0028 23.6 4.2 39 9-47 28-73 (224)
464 2ayx_A Sensor kinase protein R 25.7 68 0.0023 23.8 3.9 33 115-147 172-211 (254)
465 2o2s_A Enoyl-acyl carrier redu 25.6 97 0.0033 23.8 4.9 33 9-43 9-42 (315)
466 3i42_A Response regulator rece 25.5 78 0.0027 19.9 3.7 32 115-146 46-86 (127)
467 3dez_A OPRT, oprtase, orotate 25.5 1.1E+02 0.0038 23.1 5.0 29 116-144 100-130 (243)
468 2xj4_A MIPZ; replication, cell 25.4 98 0.0034 23.4 4.8 37 10-46 5-43 (286)
469 3dqp_A Oxidoreductase YLBE; al 25.4 39 0.0013 24.3 2.3 20 26-45 14-33 (219)
470 1byr_A Protein (endonuclease); 25.3 1.1E+02 0.0039 20.4 4.7 36 9-46 28-63 (155)
471 3ka7_A Oxidoreductase; structu 25.3 44 0.0015 26.7 2.8 29 10-43 2-30 (425)
472 3k96_A Glycerol-3-phosphate de 25.2 41 0.0014 27.0 2.6 33 8-45 29-61 (356)
473 3pdi_A Nitrogenase MOFE cofact 25.1 59 0.002 27.3 3.6 27 115-144 400-426 (483)
474 2h7i_A Enoyl-[acyl-carrier-pro 25.1 1.2E+02 0.004 22.6 5.2 35 9-45 7-42 (269)
475 3cnb_A DNA-binding response re 25.0 90 0.0031 20.0 4.0 33 115-147 53-94 (143)
476 2a33_A Hypothetical protein; s 24.9 1.3E+02 0.0044 22.3 5.2 32 10-41 15-50 (215)
477 2wyu_A Enoyl-[acyl carrier pro 24.9 84 0.0029 23.3 4.3 34 9-44 8-42 (261)
478 2dkn_A 3-alpha-hydroxysteroid 24.8 52 0.0018 24.0 3.0 32 10-44 2-33 (255)
479 1i36_A Conserved hypothetical 24.8 37 0.0013 25.4 2.2 30 9-43 1-30 (264)
480 4gkb_A 3-oxoacyl-[acyl-carrier 24.8 96 0.0033 23.5 4.6 35 8-45 6-40 (258)
481 1jfr_A Lipase; serine hydrolas 24.7 61 0.0021 23.6 3.4 36 10-45 55-90 (262)
482 3gpi_A NAD-dependent epimerase 24.7 78 0.0027 23.6 4.1 31 9-44 4-34 (286)
483 3f6c_A Positive transcription 24.6 40 0.0014 21.6 2.1 31 116-146 46-83 (134)
484 1yb4_A Tartronic semialdehyde 24.6 64 0.0022 24.4 3.6 30 9-43 4-33 (295)
485 3nrn_A Uncharacterized protein 24.6 50 0.0017 26.4 3.1 29 10-43 2-30 (421)
486 2g36_A Tryptophanyl-tRNA synth 24.6 54 0.0018 26.2 3.2 35 11-45 17-53 (340)
487 3qlj_A Short chain dehydrogena 24.5 1.2E+02 0.004 23.4 5.2 32 9-43 27-58 (322)
488 3h99_A Methionyl-tRNA syntheta 24.5 79 0.0027 26.9 4.4 41 4-44 13-63 (560)
489 3lt0_A Enoyl-ACP reductase; tr 24.4 1.1E+02 0.0037 23.7 5.0 32 10-43 3-35 (329)
490 3o74_A Fructose transport syst 24.4 1.5E+02 0.005 21.5 5.6 31 115-145 57-90 (272)
491 2ehd_A Oxidoreductase, oxidore 24.4 54 0.0018 23.8 3.0 33 10-45 6-38 (234)
492 3dhn_A NAD-dependent epimerase 24.4 49 0.0017 23.7 2.7 20 26-45 18-37 (227)
493 1jil_A Tyrrs, tyrosyl-tRNA syn 24.2 49 0.0017 27.4 2.9 36 10-46 36-74 (420)
494 3bre_A Probable two-component 24.2 85 0.0029 24.3 4.3 32 116-147 63-103 (358)
495 2b8t_A Thymidine kinase; deoxy 24.2 1.1E+02 0.0036 22.8 4.6 39 8-46 11-50 (223)
496 3trd_A Alpha/beta hydrolase; c 24.1 1.6E+02 0.0055 20.1 5.5 36 8-43 31-70 (208)
497 3c85_A Putative glutathione-re 24.1 36 0.0012 23.8 1.9 34 8-46 39-73 (183)
498 3oig_A Enoyl-[acyl-carrier-pro 24.1 1.5E+02 0.0053 21.8 5.6 33 9-44 7-41 (266)
499 1weh_A Conserved hypothetical 23.9 1E+02 0.0035 21.8 4.3 32 10-41 3-38 (171)
500 2jba_A Phosphate regulon trans 23.8 63 0.0021 20.3 3.0 33 115-147 45-86 (127)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.92 E-value=9.2e-25 Score=186.17 Aligned_cols=149 Identities=23% Similarity=0.388 Sum_probs=110.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCCCCCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKG--FHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRDATQD 85 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rG--h~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 85 (185)
+.||+++|+|++||++||++|||+|++|| +.||+++++.+..++.+..+ ...++|+|+.+|+++|++... ..+
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~----~~~~~i~~~~ipdglp~~~~~-~~~ 87 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN----EFLPNIKYYNVHDGLPKGYVS-SGN 87 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS----CCCTTEEEEECCCCCCTTCCC-CSC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc----cCCCCceEEecCCCCCCCccc-cCC
Confidence 78999999999999999999999999999 99999999866555432211 112579999999877764211 112
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhh-CCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHHhhHHHHHHC
Q 029948 86 LPALCSSIRKTCLAPFLELLGKLNS-AGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAASQFPELVNR 163 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~-~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~ 163 (185)
....+..+.+.+.+.+++.++++.. .+ +++||||+|++++|+.++|+++|||++.||+++++.+++++|++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETG--KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 1122222222223445555554321 12 4789999999999999999999999999999999999999999988765
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.92 E-value=3e-24 Score=184.10 Aligned_cols=167 Identities=50% Similarity=0.992 Sum_probs=118.4
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCC-
Q 029948 1 MGSIGVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSD- 79 (185)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~- 79 (185)
|+.....++||+++|+|++||++|+++||++|++|||+||+++++.+...+.+....+...+.++++|+.++++++...
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~ 80 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEG 80 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC----
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCccc
Confidence 5665555789999999999999999999999999999999999987765553221100000113699999987665411
Q ss_pred -CCCCCCHHHHHHHHHHhCcHHHHHHHHHHhhC--CCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHHhh
Q 029948 80 -RDATQDLPALCSSIRKTCLAPFLELLGKLNSA--GNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAASQ 156 (185)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~--~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~ 156 (185)
.....++..++..+...+.+.++++++++.+. . .++||||+|++++|+..+|+++|||++.++++++...+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 81 DGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNV--PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp -----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSS--CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred ccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccC--CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 11123454455554456778899999887532 2 479999999999999999999999999999999999999888
Q ss_pred HHHHHHCCCCCCC
Q 029948 157 FPELVNRGIVPFE 169 (185)
Q Consensus 157 ~~~l~~~~~~~~~ 169 (185)
+|.+...+..+..
T Consensus 159 ~~~~~~~~~~p~~ 171 (482)
T 2pq6_A 159 FRSFVERGIIPFK 171 (482)
T ss_dssp HHHHHHTTCSSCS
T ss_pred HHHHHhcCCCCCc
Confidence 8888777776544
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.86 E-value=6.5e-21 Score=163.46 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=109.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEcCCcc--hhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCCCCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSK-GFHVTFVNTEFN--HNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRDATQ 84 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~--~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 84 (185)
++||+++|+|++||++|+++|+++|++| ||+||+++++.. .+.+.+... ...++++|+.++.+...+ .....
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~~~~~-~~~~~ 80 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD----SLPSSISSVFLPPVDLTD-LSSST 80 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCCCCTT-SCTTC
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc----ccCCCceEEEcCCCCCCC-CCCch
Confidence 5799999999999999999999999998 999999998763 333321000 001468999998632111 11112
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCc-eEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHHhhHHHHHHC
Q 029948 85 DLPALCSSIRKTCLAPFLELLGKLNSAGNVPQV-TCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAASQFPELVNR 163 (185)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~-D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~ 163 (185)
+....+......+.+.++++++++.+. .++ ||||+|.++.|+.++|+++|||++.++++++...+.++|+|.+...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~---~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEG---GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHT---TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccC---CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 333222222344567888888876422 368 9999999999999999999999999999999999999999987754
Q ss_pred C
Q 029948 164 G 164 (185)
Q Consensus 164 ~ 164 (185)
+
T Consensus 158 ~ 158 (480)
T 2vch_A 158 V 158 (480)
T ss_dssp C
T ss_pred C
Confidence 3
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.82 E-value=2e-19 Score=153.55 Aligned_cols=144 Identities=15% Similarity=0.221 Sum_probs=106.7
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEcCCcch-----hhhhcccCCCCCCCCCCeeEEecCCC-CCCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSK--GFHVTFVNTEFNH-----NRFIRNKGPDSLKGLPDFRFETIPDG-LPPS 78 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~-----~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~ 78 (185)
+++||+++|+|++||++|+++||++|++| ||+||+++++... +.+.+.. ...++++|+.+|++ .+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~~~~ 82 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLPEVEPPPQ 82 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECCCCCCCCG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-----cCCCCceEEECCCCCCCcc
Confidence 46899999999999999999999999999 9999999988653 1111100 01146999999864 2221
Q ss_pred CCCCCCCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHHhhHH
Q 029948 79 DRDATQDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAASQFP 158 (185)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~~ 158 (185)
....+....+......+.+.++++++++ . . .++||||+|.++.|+.++|+++|||++.++++++..++.++|+|
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~-~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 83 --ELLKSPEFYILTFLESLIPHVKATIKTI-L-S--NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp --GGGGSHHHHHHHHHHHTHHHHHHHHHHH-C-C--TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred --cccCCccHHHHHHHHhhhHHHHHHHHhc-c-C--CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 0011221112222344567888888876 2 2 47999999999999999999999999999999999999999988
Q ss_pred HHH
Q 029948 159 ELV 161 (185)
Q Consensus 159 ~l~ 161 (185)
.+.
T Consensus 157 ~~~ 159 (463)
T 2acv_A 157 NRQ 159 (463)
T ss_dssp GSC
T ss_pred hhc
Confidence 654
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.82 E-value=1.5e-19 Score=154.12 Aligned_cols=155 Identities=20% Similarity=0.320 Sum_probs=101.3
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCe--EEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCC
Q 029948 1 MGSIGVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFH--VTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPS 78 (185)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~--Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~ 78 (185)
|+. +.++.||+++|+|++||++|+++||++|++|||+ ||+++++....++.+. ..+ ...++++++.+++++++.
T Consensus 1 m~~-~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~-~~~--~~~~~i~~~~i~~glp~~ 76 (456)
T 2c1x_A 1 MSQ-TTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHD-SMH--TMQCNIKSYDISDGVPEG 76 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCCCCCTT
T ss_pred CCC-CCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcc-ccc--cCCCceEEEeCCCCCCCc
Confidence 444 3346799999999999999999999999999755 5778776544433221 100 001469999998766643
Q ss_pred CCCCCCCHHHHHHHHHHhCcHHHHHHHHHHhhC-CCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHHhhH
Q 029948 79 DRDATQDLPALCSSIRKTCLAPFLELLGKLNSA-GNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAASQF 157 (185)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~~ 157 (185)
. .........+..+.+.+.+.++++++++.+. . .++||||+|.++.|+.++|+++|||++.|++++++.++.+.+.
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 153 (456)
T 2c1x_A 77 Y-VFAGRPQEDIELFTRAAPESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYI 153 (456)
T ss_dssp C-CCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTH
T ss_pred c-cccCChHHHHHHHHHHhHHHHHHHHHHHHhccC--CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhh
Confidence 1 1011111122222222234455555543211 1 4799999999999999999999999999999999999888887
Q ss_pred HHHHH
Q 029948 158 PELVN 162 (185)
Q Consensus 158 ~~l~~ 162 (185)
+.+..
T Consensus 154 ~~~~~ 158 (456)
T 2c1x_A 154 DEIRE 158 (456)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76543
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.72 E-value=6.4e-17 Score=135.54 Aligned_cols=127 Identities=17% Similarity=0.175 Sum_probs=89.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCC--C-CCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDR--D-ATQ 84 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~--~-~~~ 84 (185)
.+||+++++|+.||++|+++|+++|++|||+||+++++...+.+. . .+++++.++.+.+.... . ...
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~-~---------~g~~~~~~~~~~~~~~~~~~~~~~ 81 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVK-A---------AGATPVVYDSILPKESNPEESWPE 81 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-H---------HTCEEEECCCCSCCTTCTTCCCCS
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHH-h---------CCCEEEecCccccccccchhhcch
Confidence 479999999999999999999999999999999999988766552 2 24788888754433210 0 012
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccch
Q 029948 85 DLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASA 148 (185)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~ 148 (185)
+....+..+........+++.+.+.+ .++||||+|.+..|+..+|+++|||++.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 82 DQESAMGLFLDEAVRVLPQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 33322222222222233444443322 4799999999888999999999999999987663
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.68 E-value=2.7e-16 Score=130.12 Aligned_cols=129 Identities=18% Similarity=0.164 Sum_probs=83.6
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCC-------CC
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLP-------PS 78 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-------~~ 78 (185)
..+|||+|+++|+.||++|+++||++|++|||+||+++++...... + .++.+..+..+.. ..
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~----------~g~~~~~~~~~~~~~~~~~~~~ 88 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E----------AGLCAVDVSPGVNYAKLFVPDD 88 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T----------TTCEEEESSTTCCSHHHHSCCC
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h----------cCCeeEecCCchhHhhhccccc
Confidence 4579999999999999999999999999999999999988765433 2 2355555532111 00
Q ss_pred --CCCCC----CCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchH
Q 029948 79 --DRDAT----QDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASAC 149 (185)
Q Consensus 79 --~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~ 149 (185)
..... .................+.++++.+.. .+||+||.|.+..|+..+|+++|||++.+...+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 89 TDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred cccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 00000 011111111111122233334433332 37999999999999999999999999988766543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.61 E-value=2.9e-15 Score=125.35 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=82.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCCC-CCCHH
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRDA-TQDLP 87 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~ 87 (185)
|||+++++++.||++|+++|+++|++|||+||+++++...+.+ .. .+++++.++...... ... .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v-~~---------~g~~~~~i~~~~~~~-~~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERL-AE---------VGVPHVPVGPSARAP-IQRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HH---------TTCCEEECCC--------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHH-HH---------cCCeeeeCCCCHHHH-hhcccccch
Confidence 6899999999999999999999999999999999998865544 22 247888876532110 000 11111
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCC-ccch--HHHHHHHhCCCcEEEcccc
Q 029948 88 ALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDG-IMGF--GAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~-~~~~--~~~vA~~lgiP~i~~~~~~ 147 (185)
..+.. .+....+++++++.... .+||+||+|. +..| +..+|+++|||++.+++.+
T Consensus 70 ~~~~~---~~~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 70 EDVRR---FTTEAIATQFDEIPAAA--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHT--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHH---HHHHHHHHHHHHHHHHh--cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 11111 11122333333332111 4799999998 6778 8899999999999988776
No 9
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.53 E-value=5.5e-14 Score=116.05 Aligned_cols=124 Identities=17% Similarity=0.150 Sum_probs=84.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCC--C-CCCCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSD--R-DATQD 85 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~-~~~~~ 85 (185)
+||+++++++.||++|+++|+++|+++||+|++++++...+.+. . .++++..++...+... . ....+
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~-~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVK-A---------AGAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH-H---------TTCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHH-H---------cCCEEEecccccccccccccccccc
Confidence 39999999999999999999999999999999999877665552 2 2478887764322110 0 01112
Q ss_pred HHHHHHH-HHHhCcHHHHHHHHHHhhCCCCCCceEEEeC-CccchHHHHHHHhCCCcEEEccc
Q 029948 86 LPALCSS-IRKTCLAPFLELLGKLNSAGNVPQVTCVVSD-GIMGFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 86 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D-~~~~~~~~vA~~lgiP~i~~~~~ 146 (185)
....+.. ........+.++.+.+.+ .+||+||+| .+..++..+|+++|||++.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~ 133 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGG 133 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecc
Confidence 2222222 222222334444444432 489999999 77788889999999999988744
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.52 E-value=4.5e-14 Score=118.07 Aligned_cols=124 Identities=13% Similarity=0.101 Sum_probs=81.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCC-CCCCHH
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRD-ATQDLP 87 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~-~~~~~~ 87 (185)
|||+++++++.||++|+++|+++|+++||+||+++++...+.+. . .+++++.++......... ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~-~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA-E---------VGVPHVPVGLPQHMMLQEGMPPPPP 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-H---------HTCCEEECSCCGGGCCCTTSCCCCH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH-H---------cCCeeeecCCCHHHHHhhccccchh
Confidence 68999999999999999999999999999999999987655442 2 247788776432110000 011111
Q ss_pred HHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCC-ccch--HHHHHHHhCCCcEEEcccc
Q 029948 88 ALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDG-IMGF--GAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~-~~~~--~~~vA~~lgiP~i~~~~~~ 147 (185)
..+... ......++++.+.+.. .+||+||+|. +..+ +..+|+++|||++.+++.+
T Consensus 71 ~~~~~~---~~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 71 EEEQRL---AAMTVEMQFDAVPGAA--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHT--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHH---HHHHHHHHHHHHHHHh--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 111111 1122233343332111 4799999997 4556 7889999999999887665
No 11
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.49 E-value=2.1e-13 Score=114.05 Aligned_cols=126 Identities=18% Similarity=0.225 Sum_probs=85.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCC---CCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRD---ATQ 84 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~---~~~ 84 (185)
.+||+++++++.||++|++.|+++|+++||+|+++++....+.+ .. .+++++.++...+..... ...
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~-~~---------~g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKV-AA---------TGPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HT---------TSCEEEECCCCSCCTTSCGGGGCS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHH-Hh---------CCCEEEEcCCcCccccccccccch
Confidence 46999999999999999999999999999999999988765544 22 247788776533221100 012
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 85 DLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
+....+......+...+.++.+.+.+ .+||+||+|.+..|+..+|+++|||++.+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence 33222222211122233444444332 479999999887788899999999999988665
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.49 E-value=8.2e-14 Score=115.95 Aligned_cols=126 Identities=15% Similarity=0.091 Sum_probs=85.2
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCC----CC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDR----DA 82 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~----~~ 82 (185)
..+||+++++++.||++|+++|+++|+++||+|++++++...+.+. . .++++..++...+.... ..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~-~---------~G~~~~~~~~~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVR-A---------AGATVVPYQSEIIDADAAEVFGS 88 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH-H---------TTCEEEECCCSTTTCCHHHHHHS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHH-h---------cCCEEEeccccccccccchhhcc
Confidence 3489999999999999999999999999999999999887766653 2 24788887653332100 00
Q ss_pred CCCHHHHHHH-HHHhCcHHHHHHHHHHhhCCCCCCceEEEeC-CccchHHHHHHHhCCCcEEEcccc
Q 029948 83 TQDLPALCSS-IRKTCLAPFLELLGKLNSAGNVPQVTCVVSD-GIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D-~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
...... +.. ........++++.+.+.+ .+||+||+| ....++..+|+++|||++.+.+..
T Consensus 89 ~~~~~~-~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 89 DDLGVR-PHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp SSSCHH-HHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccHHHH-HHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecc
Confidence 011111 111 111112233444444432 479999999 777788889999999999887543
No 13
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.39 E-value=2.8e-12 Score=106.42 Aligned_cols=124 Identities=17% Similarity=0.210 Sum_probs=82.7
Q ss_pred CCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCC-------
Q 029948 5 GVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPP------- 77 (185)
Q Consensus 5 ~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~------- 77 (185)
+...|||+|++.++.||++|++.|+++|.++||+|+++++ ...+.+ .. .+++++.++.+...
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~-~~---------~G~~~~~~~~~~~~~~~~~~~ 85 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRA-AA---------AGLEVVDVAPDYSAVKVFEQV 85 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHH-HT---------TTCEEEESSTTCCHHHHHHHH
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHH-Hh---------CCCeeEecCCccCHHHHhhhc
Confidence 3456899999999999999999999999999999999998 655544 22 34788887632100
Q ss_pred -------------CCCCCCCCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEc
Q 029948 78 -------------SDRDATQDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLW 144 (185)
Q Consensus 78 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~ 144 (185)
........+...+..........+.+++++ .+||+||+|....++..+|+++|||++...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~ 158 (398)
T 3oti_A 86 AKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD-------YRPDLVVYEQGATVGLLAADRAGVPAVQRN 158 (398)
T ss_dssp HHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEEC
T ss_pred ccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCEEEECchhhHHHHHHHHcCCCEEEEe
Confidence 000001112222222222222344445544 379999999877778889999999999776
Q ss_pred cc
Q 029948 145 TA 146 (185)
Q Consensus 145 ~~ 146 (185)
..
T Consensus 159 ~~ 160 (398)
T 3oti_A 159 QS 160 (398)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.38 E-value=3e-12 Score=105.51 Aligned_cols=125 Identities=12% Similarity=0.078 Sum_probs=81.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCC-C-------CCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLP-P-------SDR 80 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~-------~~~ 80 (185)
|||++++.++.||++|++.|+++|+++||+|++++++...+.+ +. .+++++.++.... . ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~-~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVV-TG---------VGLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHH-HH---------TTCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHH-Hh---------CCCEEEEeCCcchHHHHhhhcccCc
Confidence 6899999999999999999999999999999999987765444 22 2366766653210 0 000
Q ss_pred CCC-CC--HHHHH-HH-HHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 81 DAT-QD--LPALC-SS-IRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 81 ~~~-~~--~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
... .+ ....+ .. ....+...++++.+.+.+ .+||+||+|.+..++..+|+++|||++.++..+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 71 EAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred cccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 000 11 11111 11 111112233444443332 379999999887888889999999999887543
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.38 E-value=1.1e-12 Score=110.50 Aligned_cols=127 Identities=13% Similarity=0.123 Sum_probs=86.2
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCC-C---C---
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPP-S---D--- 79 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~---~--- 79 (185)
..+||+++++++.||++|+++|+++|.++||+|++++++...+.+ .. .+++++.++..... + .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v-~~---------~G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDI-TA---------AGLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHH-HT---------TTCCEEECSCCCCHHHHHHHTTH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHH-Hh---------CCCceeecCCccchHHHhhhhhc
Confidence 348999999999999999999999999999999999988765544 22 34788887643210 0 0
Q ss_pred --------CC-----CC-CCHHHH---HHHHHHh----C-cH-HHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHh
Q 029948 80 --------RD-----AT-QDLPAL---CSSIRKT----C-LA-PFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARIL 136 (185)
Q Consensus 80 --------~~-----~~-~~~~~~---~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~l 136 (185)
.+ .. ..+..+ +..+... . .. .++++++.+.+ .+||+||.|.+..++..+|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~aA~~l 164 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK----WRPDLVIWEPLTFAAPIAAAVT 164 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHH
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh----cCCCEEEecCcchhHHHHHHHc
Confidence 00 00 011111 1112111 1 13 56666655443 3799999999877889999999
Q ss_pred CCCcEEEcccc
Q 029948 137 GIPDVQLWTAS 147 (185)
Q Consensus 137 giP~i~~~~~~ 147 (185)
|||++.+...+
T Consensus 165 giP~v~~~~~~ 175 (441)
T 2yjn_A 165 GTPHARLLWGP 175 (441)
T ss_dssp TCCEEEECSSC
T ss_pred CCCEEEEecCC
Confidence 99999886554
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.38 E-value=6e-13 Score=111.16 Aligned_cols=121 Identities=15% Similarity=0.175 Sum_probs=79.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCC--CC-CCCCCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPP--SD-RDATQD 85 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~--~~-~~~~~~ 85 (185)
|||+|++.++.||++|++.|+++|.+|||+|++++++...+.+ +. .++++..++.+... .. ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v-~~---------~g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERC-AE---------VGVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHH-HH---------TTCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHH-HH---------cCCceeecCCCHHHHhccccCCHHH
Confidence 6899999999999999999999999999999999988776655 33 24777777632211 00 000111
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchH---HHHHHHhCCCcEEEcccch
Q 029948 86 LPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFG---AKAARILGIPDVQLWTASA 148 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~---~~vA~~lgiP~i~~~~~~~ 148 (185)
....+ .......++++.+.+ .++|+||+|....++ ..+|+++|||++....++.
T Consensus 71 ~~~~~---~~~~~~~~~~l~~~~------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 71 AAEVV---TEVVAEWFDKVPAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp CGGGH---HHHHHHHHHHHHHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHH---HHHHHHHHHHHHHHh------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 11111 111122333333322 368999998765554 6799999999998777664
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.31 E-value=4.7e-12 Score=104.93 Aligned_cols=129 Identities=18% Similarity=0.180 Sum_probs=80.7
Q ss_pred CCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCC--------
Q 029948 5 GVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLP-------- 76 (185)
Q Consensus 5 ~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-------- 76 (185)
+...|||++++.++.||++|+++|+++|.++||+|++++++...+.+ .. .++++..++.+..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~-~~---------~G~~~~~~~~~~~~~~~~~~~ 81 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTV-TG---------AGLPFAPTCPSLDMPEVLSWD 81 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHH-HH---------TTCCEEEEESSCCHHHHHSBC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHH-Hh---------CCCeeEecCCccchHhhhhhh
Confidence 35569999999999999999999999999999999999987766555 22 2356666542100
Q ss_pred -CCCCCC-CCCHHHHH----HHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 77 -PSDRDA-TQDLPALC----SSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 77 -~~~~~~-~~~~~~~~----~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
...... ........ ..........++++.+.+.+ .+||+||.|....++..+|+++|||++.+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 82 REGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp TTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred ccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccHHHHHHHhhCCCEEEeccCC
Confidence 000000 01111111 11111112223333333322 379999999877778889999999999877654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.27 E-value=1.3e-11 Score=101.84 Aligned_cols=126 Identities=16% Similarity=0.155 Sum_probs=77.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEec-CCCC--CCC------
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETI-PDGL--PPS------ 78 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~--~~~------ 78 (185)
+|||++++.++.||++|++.|+++|.++||+|+++++....+.+ .. .++++..+ +.+. ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~---------~g~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATA-HG---------AGLTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHH-HH---------BTCEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHH-Hh---------CCCceeeecCCccchhhhhhhccc
Confidence 48999999999999999999999999999999999987665544 22 23566665 3211 000
Q ss_pred CCC---C-C--CCHHHHHHHHHHhC----cHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 79 DRD---A-T--QDLPALCSSIRKTC----LAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 79 ~~~---~-~--~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
... . . ......+......+ ...+.++.+.+.+ .+||+||.|....++..+|+++|||++.+....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 71 FPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA----WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp SCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred ccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh----cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 000 0 0 00111111111111 0113333333322 379999999877667889999999999876544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.18 E-value=7.1e-11 Score=97.80 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=81.0
Q ss_pred CCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCC----------
Q 029948 5 GVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDG---------- 74 (185)
Q Consensus 5 ~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---------- 74 (185)
+..+|||++++.++.||++|++.|+++|.++||+|++++.....+.+ .. .++++..++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~---------~g~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTL-RK---------LGFEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HH---------TTCEEEECCCCHHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHH-Hh---------cCCceeecCcccccchhhhhh
Confidence 46679999999999999999999999999999999999987654443 22 24777776530
Q ss_pred --CCC-CCCC-----CCCCHHHHHHHH-HHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcc
Q 029948 75 --LPP-SDRD-----ATQDLPALCSSI-RKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 75 --~~~-~~~~-----~~~~~~~~~~~~-~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~ 145 (185)
... .... ........+... .......+.+++++ .+||+||.|....++..+|+++|||++....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~ 159 (412)
T 3otg_A 87 IRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-------LRPDLVVQEISNYGAGLAALKAGIPTICHGV 159 (412)
T ss_dssp HHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECC
T ss_pred hhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-------cCCCEEEECchhhHHHHHHHHcCCCEEEecc
Confidence 000 0000 001111111111 11111233444443 3799999997666677889999999998765
Q ss_pred cc
Q 029948 146 AS 147 (185)
Q Consensus 146 ~~ 147 (185)
..
T Consensus 160 ~~ 161 (412)
T 3otg_A 160 GR 161 (412)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.86 E-value=2.3e-08 Score=82.47 Aligned_cols=117 Identities=21% Similarity=0.313 Sum_probs=69.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcch-hhhhcccCCCCCCCCCCeeEEecCC-CCCCCCCCCCCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNH-NRFIRNKGPDSLKGLPDFRFETIPD-GLPPSDRDATQD 85 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~ 85 (185)
+.||++..+++.||++|.+.|+++|.+|||+|+|+++.... ..+... .+++++.++. +++.... ...
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~---------~g~~~~~i~~~~~~~~~~--~~~ 70 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK---------AGLPLHLIQVSGLRGKGL--KSL 70 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG---------GTCCEEECC--------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh---------cCCcEEEEECCCcCCCCH--HHH
Confidence 35899888877799999999999999999999999876532 222222 2467777653 2211000 011
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccchH--HHHHHHhCCCcEEEc
Q 029948 86 LPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGFG--AKAARILGIPDVQLW 144 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~--~~vA~~lgiP~i~~~ 144 (185)
+...++.... . .....++++ .+||+||.+...... ...|+.+|||++..-
T Consensus 71 ~~~~~~~~~~-~-~~~~~~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe 122 (365)
T 3s2u_A 71 VKAPLELLKS-L-FQALRVIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE 122 (365)
T ss_dssp --CHHHHHHH-H-HHHHHHHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHH-H-HHHHHHHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe
Confidence 1111111111 1 123345554 379999988655433 456889999999753
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.14 E-value=2.7e-05 Score=62.85 Aligned_cols=115 Identities=21% Similarity=0.276 Sum_probs=69.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchh-hhhcccCCCCCCCCCCeeEEecCCC-CCCCCCCCCCCH
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHN-RFIRNKGPDSLKGLPDFRFETIPDG-LPPSDRDATQDL 86 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~ 86 (185)
+||++++.+..||..++..|+++|+++||+|++++...... ..... .++++..++.. .+. ...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~------~~~ 71 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRG------KGI 71 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTT------CCH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCc------Ccc
Confidence 79999998777999999999999999999999998765321 11111 24666666421 111 111
Q ss_pred HHHHHHHHHh--CcHHHHHHHHHHhhCCCCCCceEEEeCCcc--chHHHHHHHhCCCcEEEcc
Q 029948 87 PALCSSIRKT--CLAPFLELLGKLNSAGNVPQVTCVVSDGIM--GFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 87 ~~~~~~~~~~--~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~--~~~~~vA~~lgiP~i~~~~ 145 (185)
...+...... ....+.+++++ .+||+|+.+... ..+..+++.+|+|++....
T Consensus 72 ~~~~~~~~~~~~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 72 KALIAAPLRIFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 1111000000 01223334443 379999987643 2245677889999986543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.29 E-value=0.0049 Score=50.36 Aligned_cols=40 Identities=18% Similarity=0.303 Sum_probs=32.1
Q ss_pred CCceEEEEcCC-----CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 7 TKQHVIVLPYP-----SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 7 ~~~~il~~~~p-----~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++|||++++.- ..|--.-+..|+++|+++||+|+++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 36899998832 33556778999999999999999999553
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.86 E-value=0.0047 Score=50.82 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=33.1
Q ss_pred CCCceEEEEcC---C--------CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 6 VTKQHVIVLPY---P--------SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 6 ~~~~~il~~~~---p--------~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
...+||++++. | ..|+-..+..|++.|+++||+|++++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 69 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRAT 69 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCC
Confidence 44589999985 2 35888999999999999999999998654
No 24
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=94.89 E-value=0.69 Score=37.13 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=31.2
Q ss_pred CCceEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 7 TKQHVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 7 ~~~~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
-+.++....+|.. |.-.-...|++.|+++||+|++++...
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 54 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGL 54 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3467777777754 677888999999999999999998754
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=94.33 E-value=0.16 Score=40.56 Aligned_cols=109 Identities=12% Similarity=0.094 Sum_probs=63.9
Q ss_pred CCceEEEEcC--C--CCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCCC
Q 029948 7 TKQHVIVLPY--P--SQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRDA 82 (185)
Q Consensus 7 ~~~~il~~~~--p--~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 82 (185)
.++||++++. + ..|.-.-+..|++.| +||+|++++..........-. ...++++..++....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD------KTLDYEVIRWPRSVM------ 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH------TTCSSEEEEESSSSC------
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc------cccceEEEEcccccc------
Confidence 3689998874 3 358889999999999 799999998765432100000 013466666653111
Q ss_pred CCCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccc--hHHHHHHHhCCCcEEEcc
Q 029948 83 TQDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMG--FGAKAARILGIPDVQLWT 145 (185)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~--~~~~vA~~lgiP~i~~~~ 145 (185)
..... . ...+.+++++ .++|+|+.....+ +....++++|+|.+.+..
T Consensus 69 ~~~~~----~-----~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~ 117 (394)
T 3okp_A 69 LPTPT----T-----AHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIAST 117 (394)
T ss_dssp CSCHH----H-----HHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEEC
T ss_pred ccchh----h-----HHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEe
Confidence 01111 0 1234445554 3799999654433 345678899999554333
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=93.77 E-value=0.42 Score=38.18 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=27.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSK-GFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~ 46 (185)
+||++++.. .+.......|+++|.++ ||+|.++++..
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~ 43 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQ 43 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSS
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCC
Confidence 789988754 33345567889999998 79988776543
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=92.29 E-value=0.45 Score=37.98 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=27.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCC-eEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGF-HVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh-~Vt~it~ 44 (185)
|||++++.. .++...+.+|+++|.++|+ ++.++.+
T Consensus 1 mkIl~v~~~-~~~~~~~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 1 MKVLTVFGT-RPEAIKMAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp CEEEEEECS-HHHHHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred CeEEEEecc-cHHHHHHHHHHHHHHhCCCCceEEEEc
Confidence 578887654 5778888999999999994 8876544
No 28
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.01 E-value=0.11 Score=42.93 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=31.3
Q ss_pred CCCceEEEEcCCCC-----CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 6 VTKQHVIVLPYPSQ-----GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 6 ~~~~~il~~~~p~~-----GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
..++||++++.... |=.+.+..|+++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 45689998775322 222568999999999999999999753
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=91.84 E-value=0.14 Score=40.69 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=30.5
Q ss_pred ceEEEEcC---CCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPY---PSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~---p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
|||+++.. |..|.-.-+..|++.|+++||+|++++...
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 57887753 445778889999999999999999998653
No 30
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=91.84 E-value=0.21 Score=39.43 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=32.3
Q ss_pred CceEEEEcCC----------------CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPYP----------------SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p----------------~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+||+++... ..|.-.-...|++.|+++||+|++++...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4789988765 24677889999999999999999998654
No 31
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=91.81 E-value=1.4 Score=34.80 Aligned_cols=103 Identities=13% Similarity=0.135 Sum_probs=65.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEcCCcchhhhhcccCCCCCCCCCCe-eEEecCCCCCCCCCCCCCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSK--GFHVTFVNTEFNHNRFIRNKGPDSLKGLPDF-RFETIPDGLPPSDRDATQD 85 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~~~~~ 85 (185)
+||+++...+.|++.-..++.+.|.++ |.++++++.+...+.+ + ..+.+ +++.++. .. . ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~-~--------~~p~i~~v~~~~~--~~-~---~~~ 65 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL-S--------RMPEVNEAIPMPL--GH-G---ALE 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH-T--------TCTTEEEEEEC-------------C
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH-h--------cCCccCEEEEecC--Cc-c---ccc
Confidence 589999998889999999999999987 8999999998766543 2 12445 3444321 00 0 001
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCccch-HHHHHHHhCCCc-EEE
Q 029948 86 LPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIMGF-GAKAARILGIPD-VQL 143 (185)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~-~~~vA~~lgiP~-i~~ 143 (185)
+ ....++.+.+.+ .+||++| |....+ ...++...|+|. +.|
T Consensus 66 ~------------~~~~~l~~~l~~----~~~D~vi-d~~~~~~sa~~~~~~~~~~~ig~ 108 (348)
T 1psw_A 66 I------------GERRKLGHSLRE----KRYDRAY-VLPNSFKSALVPLFAGIPHRTGW 108 (348)
T ss_dssp H------------HHHHHHHHHTTT----TTCSEEE-ECSCCSGGGHHHHHTTCSEEEEE
T ss_pred h------------HHHHHHHHHHHh----cCCCEEE-ECCCChHHHHHHHHhCCCEEecc
Confidence 1 122345555543 4799988 443333 456777889997 444
No 32
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=91.54 E-value=0.17 Score=42.29 Aligned_cols=128 Identities=15% Similarity=0.142 Sum_probs=66.1
Q ss_pred CceEEEEcCC---------------CCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhc-ccCCCCCCCCCCeeEEec
Q 029948 8 KQHVIVLPYP---------------SQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIR-NKGPDSLKGLPDFRFETI 71 (185)
Q Consensus 8 ~~~il~~~~p---------------~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~-~~~~~~~~~~~~i~~~~l 71 (185)
.|||++++.. ..|.-..+..|++.|+++||+|++++.......... ...........+++++.+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 5899998852 246778899999999999999999986532111000 000000000135777776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEeCCcc-ch-HHHHHHHhCCCcEEEccc
Q 029948 72 PDGLPPSDRDATQDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVSDGIM-GF-GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~D~~~-~~-~~~vA~~lgiP~i~~~~~ 146 (185)
+..... ... ...+...+... ...+..++++. . .++|+|.+.... .+ +..+++.+|+|++...-.
T Consensus 87 ~~~~~~-~~~-~~~~~~~~~~~----~~~l~~~l~~~--~---~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~ 152 (499)
T 2r60_A 87 PFGGDK-FLP-KEELWPYLHEY----VNKIINFYREE--G---KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152 (499)
T ss_dssp CCSCSS-CCC-GGGCGGGHHHH----HHHHHHHHHHH--T---CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred cCCCcC-CcC-HHHHHHHHHHH----HHHHHHHHHhc--C---CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence 531110 000 00111011110 12233344331 0 279998865433 22 345678889998864443
No 33
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.38 E-value=0.24 Score=42.56 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=29.8
Q ss_pred CCCCceEEEEcCCC------CCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 5 GVTKQHVIVLPYPS------QGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 5 ~~~~~~il~~~~p~------~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+|||+++++-. .|=-.-.-.|.++|+++||+|+++++
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEec
Confidence 57789999997531 12224577899999999999999984
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=90.94 E-value=1.5 Score=34.65 Aligned_cols=38 Identities=13% Similarity=0.070 Sum_probs=29.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhC-C-CeEEEEcCCc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSK-G-FHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~r-G-h~Vt~it~~~ 46 (185)
++||++++. +.++......++++|.++ | |+|.++++..
T Consensus 8 ~mkIl~v~~-~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIFG-TRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEec-CcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 589999974 357778888999999998 5 8887776543
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=90.80 E-value=0.35 Score=39.19 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=32.8
Q ss_pred CCceEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 7 TKQHVIVLPYP--SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 7 ~~~~il~~~~p--~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.++||+++... +.|+-..+..|++.|+++||+|++++...
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 46899877653 34888999999999999999999987654
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=90.16 E-value=0.97 Score=36.99 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=59.7
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEcCCcchh---hhhcccCCCCCCCCCCee-EEecCCCCCCCCC
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSK-GFHVTFVNTEFNHN---RFIRNKGPDSLKGLPDFR-FETIPDGLPPSDR 80 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~~~---~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~ 80 (185)
++.+||++++ +..+.+.=+.+|.++|.++ |+++.++.+....+ ...+..+ ++ -..+. +..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~---------i~~~~~l~--~~~--- 87 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFS---------ITPDFDLN--IME--- 87 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTT---------CCCSEECC--CCC---
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcC---------CCCceeee--cCC---
Confidence 3345777766 4556677889999999998 78887665543321 1111111 11 01121 100
Q ss_pred CCCCCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEe--CCccchH-HHHHHHhCCCcEEEc
Q 029948 81 DATQDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVS--DGIMGFG-AKAARILGIPDVQLW 144 (185)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~--D~~~~~~-~~vA~~lgiP~i~~~ 144 (185)
....... ..... ...+.+++++. +||+|+. |....++ ...|.++|||++.+.
T Consensus 88 -~~~~~~~---~~~~~-~~~l~~~l~~~-------kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 88 -PGQTLNG---VTSKI-LLGMQQVLSSE-------QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp -TTCCHHH---HHHHH-HHHHHHHHHHH-------CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred -CCCCHHH---HHHHH-HHHHHHHHHhc-------CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 0112221 11111 23555666653 7998884 4334454 567889999988764
No 37
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=90.11 E-value=0.28 Score=44.46 Aligned_cols=110 Identities=8% Similarity=0.080 Sum_probs=52.4
Q ss_pred HHHHHHHhCCCeEE----EEcCCcchhhhhcccCCC--CCCCCCCeeEEecCCCCCC---CCCCCCCCHHHHHHHHHHhC
Q 029948 27 QLAKLLHSKGFHVT----FVNTEFNHNRFIRNKGPD--SLKGLPDFRFETIPDGLPP---SDRDATQDLPALCSSIRKTC 97 (185)
Q Consensus 27 ~La~~La~rGh~Vt----~it~~~~~~~~~~~~~~~--~~~~~~~i~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~ 97 (185)
+|+++|+++||+|+ ++|-..... .....+.. ......+++++.+|-.... ........+..++..+.
T Consensus 318 ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~--- 393 (816)
T 3s28_A 318 EMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYT--- 393 (816)
T ss_dssp HHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHH---
T ss_pred HHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHH---
Confidence 58888899999987 776432211 10000000 0112246777776631110 00111112221111111
Q ss_pred cHHHHHHHHHHhhCCCCCCceEEEeCCcc-ch-HHHHHHHhCCCcEEEcc
Q 029948 98 LAPFLELLGKLNSAGNVPQVTCVVSDGIM-GF-GAKAARILGIPDVQLWT 145 (185)
Q Consensus 98 ~~~~~~ll~~l~~~~~~~~~D~vI~D~~~-~~-~~~vA~~lgiP~i~~~~ 145 (185)
...+..++... . .+||+|..-... .+ +..+++++|+|++...-
T Consensus 394 ~~~l~~il~~~---~--~~PDVIHsH~~~sglva~llar~~gvP~V~T~H 438 (816)
T 3s28_A 394 EDAAVELSKEL---N--GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAH 438 (816)
T ss_dssp HHHHHHHHHHC---S--SCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHhc---C--CCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEe
Confidence 12334444432 1 479999864322 22 45688999999986543
No 38
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=89.34 E-value=0.44 Score=38.20 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=32.2
Q ss_pred CCceEEEEcCC---C-CCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 7 TKQHVIVLPYP---S-QGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 7 ~~~~il~~~~p---~-~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
..|||+++..- . .|.-.-+..+++.|+++||+|++++....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~ 63 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASP 63 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 45899988742 2 46668899999999999999999987654
No 39
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=89.04 E-value=0.37 Score=40.01 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=29.7
Q ss_pred ceEEEEcCC------CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYP------SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p------~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
|||++++.. ..|=-.-+..|++.|+++||+|++++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 588888652 23445778899999999999999998654
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=88.69 E-value=0.42 Score=39.67 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=29.4
Q ss_pred ceEEEEcCC------CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYP------SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p------~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
|||++++.. ..|=-.-+..|+++|+++||+|++++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 588888752 12444677899999999999999998654
No 41
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=85.42 E-value=8.4 Score=29.69 Aligned_cols=38 Identities=24% Similarity=0.359 Sum_probs=31.1
Q ss_pred CceEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPY--PSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~--p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+++++++++ |+.|=-.-...||..|+++|.+|.++-.+
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 456665554 68899999999999999999999998654
No 42
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=85.00 E-value=2.2 Score=34.80 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=58.7
Q ss_pred EEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchh-hhhcccCCCCCCCCCCeeEEecCC-CCCCCCCCCCCCHHHHH
Q 029948 13 VLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHN-RFIRNKGPDSLKGLPDFRFETIPD-GLPPSDRDATQDLPALC 90 (185)
Q Consensus 13 ~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~ 90 (185)
.+-+++.--+.=+.++.++|.++ ++..++.+....+ ...... . ..+.+. -|+ .+..+ ........
T Consensus 13 ~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~-~------~~~~i~-~~~~~l~~~----~~~~~~~~ 79 (385)
T 4hwg_A 13 MTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF-F------DDMGIR-KPDYFLEVA----ADNTAKSI 79 (385)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH-H------C-CCCC-CCSEECCCC----CCCSHHHH
T ss_pred eEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH-H------hhCCCC-CCceecCCC----CCCHHHHH
Confidence 34456677788889999999887 8887776665433 221100 0 001110 011 01111 11122111
Q ss_pred HHHHHhCcHHHHHHHHHHhhCCCCCCceEEEe--CCccchHHHHHHHhCCCcEEEcc
Q 029948 91 SSIRKTCLAPFLELLGKLNSAGNVPQVTCVVS--DGIMGFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 91 ~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~--D~~~~~~~~vA~~lgiP~i~~~~ 145 (185)
. . ....+++++++. +||+||. |....++...|.++|||++.+..
T Consensus 80 ~---~-~~~~l~~~l~~~-------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea 125 (385)
T 4hwg_A 80 G---L-VIEKVDEVLEKE-------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA 125 (385)
T ss_dssp H---H-HHHHHHHHHHHH-------CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC
T ss_pred H---H-HHHHHHHHHHhc-------CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC
Confidence 1 1 124556666653 7898874 55555666688999999876653
No 43
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=84.80 E-value=2.5 Score=34.61 Aligned_cols=109 Identities=15% Similarity=0.086 Sum_probs=57.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEcCCcch---hhhhcccCCCCCCCCCCeeE-EecCCCCCCCCCCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSK--GFHVTFVNTEFNH---NRFIRNKGPDSLKGLPDFRF-ETIPDGLPPSDRDA 82 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~---~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~ 82 (185)
+||++++. ..+.+.=+.+|.++|.++ |+++.++.+.... +...+.. +++. ..+. +.. .
T Consensus 28 ~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~---------~i~~~~~l~--v~~----~ 91 (403)
T 3ot5_A 28 IKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF---------DIKPDIDLD--IMK----K 91 (403)
T ss_dssp EEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT---------TCCCSEECC--CCC-----
T ss_pred ceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc---------CCCCCcccc--cCC----C
Confidence 47777764 445567778899999998 6887766554321 1111111 1110 1111 100 0
Q ss_pred CCCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCceEEEe--CCccchH-HHHHHHhCCCcEEEc
Q 029948 83 TQDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQVTCVVS--DGIMGFG-AKAARILGIPDVQLW 144 (185)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~D~vI~--D~~~~~~-~~vA~~lgiP~i~~~ 144 (185)
...... .... ....+.+++++. +||+|+. |....++ ...|.++|||++.+.
T Consensus 92 ~~~~~~---~~~~-~~~~l~~~l~~~-------kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 92 GQTLAE---ITSR-VMNGINEVIAAE-------NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CCCHHH---HHHH-HHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCHHH---HHHH-HHHHHHHHHHHc-------CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 112221 1111 124555666653 7998884 3344453 568899999987654
No 44
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=83.88 E-value=2.1 Score=31.83 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=38.8
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
++.++++.+.++..|-....-++..|.++|++|..+...-..+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 456999999999999999999999999999999999866544443
No 45
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=83.76 E-value=1.4 Score=31.58 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=38.7
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
.++.++++.+.++..|-.-..-++..|..+|++|..+......+.+
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~l 61 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQV 61 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 3568999999999999999999999999999999998755443333
No 46
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=83.54 E-value=9 Score=29.97 Aligned_cols=39 Identities=15% Similarity=0.390 Sum_probs=31.1
Q ss_pred CceEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPY--PSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~--p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+.+++++++ |+.|=-.-...||..|+++|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 345555544 688999999999999999999999986543
No 47
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=82.77 E-value=9 Score=29.84 Aligned_cols=39 Identities=18% Similarity=0.338 Sum_probs=30.7
Q ss_pred CceEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPY--PSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~--p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+.+++++++ |+.|=-.-...||..|+++|.+|.++-.+.
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 345554443 678999999999999999999999986543
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=81.25 E-value=4.9 Score=32.17 Aligned_cols=106 Identities=12% Similarity=0.086 Sum_probs=68.1
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEcCCcchhhhhcccCCCCCCCCCCee-EEecCCCCCCCCCCCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSK--GFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFR-FETIPDGLPPSDRDAT 83 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~ 83 (185)
+..||+++-..+.|++.-..++.+.|.++ +.+|++++.+.+.+-+ + ..|.++ ++.++. .
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~-~--------~~p~vd~vi~~~~----~----- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVM-E--------YNPNIDELIVVDK----K----- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGT-S--------SCTTCSEEEEECC----S-----
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH-h--------cCCCccEEEEeCc----c-----
Confidence 35799999999999999999999999998 8999999998876544 2 235565 454431 0
Q ss_pred CCHHHHHHHHHHhCcHHHHHHHHHHhhCCCCCCc-eEEEeCCccchHHHHHHHhCCCcE-EE
Q 029948 84 QDLPALCSSIRKTCLAPFLELLGKLNSAGNVPQV-TCVVSDGIMGFGAKAARILGIPDV-QL 143 (185)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~-D~vI~D~~~~~~~~vA~~lgiP~i-~~ 143 (185)
.....+ ..+.++++++.+ .+| |++|.=....-...++...|+|.. .|
T Consensus 69 -~~~~~~--------~~~~~l~~~Lr~----~~y~D~vidl~~~~rs~~l~~~~~a~~riG~ 117 (349)
T 3tov_A 69 -GRHNSI--------SGLNEVAREINA----KGKTDIVINLHPNERTSYLAWKIHAPITTGM 117 (349)
T ss_dssp -SHHHHH--------HHHHHHHHHHHH----HCCCCEEEECCCSHHHHHHHHHHCCSEEEEC
T ss_pred -cccccH--------HHHHHHHHHHhh----CCCCeEEEECCCChHHHHHHHHhCCCeEEec
Confidence 111101 112234444433 378 998842222234567888899864 44
No 49
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=80.76 E-value=2.8 Score=32.35 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=37.0
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
..+.+|++.+.++..|-....-++..|.++|++|..+...-.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp 162 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVP 162 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 346799999999999999999999999999999999875433
No 50
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=80.04 E-value=4.1 Score=30.57 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=38.7
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
.++.++++.+.++..|-....-++..|.++|++|..+...-..+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 4468999999999999999999999999999999999765544444
No 51
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=79.61 E-value=2.5 Score=29.26 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=37.1
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
+.++++.+.++..|-.-..-++..|..+|++|..+......+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 46899999999999999999999999999999988765443333
No 52
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=78.20 E-value=4.1 Score=31.06 Aligned_cols=42 Identities=21% Similarity=0.180 Sum_probs=36.9
Q ss_pred CCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 5 GVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 5 ~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+++.+|++.--||.|=..-++.+|.+|+++|+.|.++..+.
T Consensus 3 ~~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 3 ARGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 456788999999999999999999999999999998876653
No 53
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.60 E-value=3 Score=31.34 Aligned_cols=43 Identities=12% Similarity=0.092 Sum_probs=36.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
+.||++--+++.|=+- ...|.+.|.++|++|.++.++...+.+
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 3589988888877776 889999999999999999988766544
No 54
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=77.15 E-value=3.8 Score=29.87 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=34.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
.||++.-.++.|=+ =..++.++|.++|++|+++.++...+.+
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 58888888886555 4889999999999999999988765443
No 55
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=76.81 E-value=2.6 Score=28.66 Aligned_cols=31 Identities=16% Similarity=0.010 Sum_probs=22.3
Q ss_pred CCceEEEeCCccch--HHHHHHH---hCCCcEEEcc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARI---LGIPDVQLWT 145 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~---lgiP~i~~~~ 145 (185)
.+||+||.|..++. +..++++ .++|+|.++.
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 47999999998865 4566654 4788776543
No 56
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=76.80 E-value=2.9 Score=31.13 Aligned_cols=42 Identities=14% Similarity=0.142 Sum_probs=34.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEcCCcchhhh
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSK-GFHVTFVNTEFNHNRF 51 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~~~~~ 51 (185)
+||++--+++.|-+- ...|.+.|.++ |++|.++.++...+.+
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi 43 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTI 43 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHh
Confidence 478888888876655 89999999999 9999999988766555
No 57
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=74.62 E-value=4.6 Score=30.31 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=35.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
+.||++.-.++.+-+- ...|.++|.++| +|.++.++...+.+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 4689999999887766 899999999999 99999988765544
No 58
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=73.81 E-value=4.6 Score=27.79 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=25.3
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccch
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTASA 148 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~~ 148 (185)
.+||+||.|..++. +..+++++ ++|++.++...-
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 37999999998876 67777755 478877766543
No 59
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=71.62 E-value=14 Score=28.88 Aligned_cols=27 Identities=30% Similarity=0.325 Sum_probs=22.7
Q ss_pred CCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 16 YPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 16 ~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.-|.||+.=++.||++|. +|+|++...
T Consensus 12 ~IG~GHvmRcl~LA~~l~----~v~F~~~~~ 38 (282)
T 3hbm_A 12 QIGFGHIKRDLVLAKQYS----DVSFACLPL 38 (282)
T ss_dssp TTBSHHHHHHHHHHTTCS----SEEEEECCC
T ss_pred CccccHHHHHHHHHHHHH----hCEEEEecC
Confidence 346699999999999999 799997654
No 60
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=69.82 E-value=3.5 Score=33.58 Aligned_cols=38 Identities=13% Similarity=0.282 Sum_probs=25.9
Q ss_pred CCCceEEEEc---CCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 6 VTKQHVIVLP---YPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 6 ~~~~~il~~~---~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
..+|||++++ +| .+.-.-...+++.|+++| +|++++..
T Consensus 12 ~~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp -CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 3468999887 44 222223456788999999 99999543
No 61
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=69.12 E-value=8.9 Score=24.83 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=23.8
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccch
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTASA 148 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~~ 148 (185)
.+||+||.|..++. +..+.+++ ++|++.++...-
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 47999999987754 56666654 478877766443
No 62
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=67.39 E-value=7 Score=29.07 Aligned_cols=42 Identities=19% Similarity=-0.017 Sum_probs=33.6
Q ss_pred CceEEEEcCCCCCChH-HHHHHHHHHHhCCCeEEEEcCCcchhh
Q 029948 8 KQHVIVLPYPSQGHIT-PMMQLAKLLHSKGFHVTFVNTEFNHNR 50 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~-P~l~La~~La~rGh~Vt~it~~~~~~~ 50 (185)
..||++--+++ +... =...|.++|.++|++|+++.++...+.
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~ 49 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTT 49 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCT
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHH
Confidence 35888888887 4444 789999999999999999988865543
No 63
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.64 E-value=7.1 Score=28.73 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=35.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhh
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFI 52 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~ 52 (185)
.||++.-+++.|-+ =..++.++|.++|++|.++.++...+.+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 37888888888855 57899999999999999999887665553
No 64
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=65.50 E-value=9.9 Score=29.11 Aligned_cols=31 Identities=35% Similarity=0.543 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
|||++. ++.|-+- ..|+++|.++||+|+.++
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVS 31 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEE
Confidence 565543 3335443 468999999999999986
No 65
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=65.23 E-value=6.7 Score=28.64 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=33.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
.||++.-.++.|=+ =...+.++|.++|++|.++.++...+.+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 37887777776555 6789999999999999999988765444
No 66
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=65.17 E-value=6.1 Score=31.61 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=28.2
Q ss_pred ceEEEEcC--CC-CCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPY--PS-QGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~--p~-~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
|||++++. |. .|--.-...|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 67887742 32 35667789999999999 9999987543
No 67
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=64.32 E-value=7 Score=29.26 Aligned_cols=39 Identities=15% Similarity=-0.063 Sum_probs=29.6
Q ss_pred ceEEEEcCCCCCChHH-HHHHHHHHHhCCCeEEEEcCCcch
Q 029948 9 QHVIVLPYPSQGHITP-MMQLAKLLHSKGFHVTFVNTEFNH 48 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P-~l~La~~La~rGh~Vt~it~~~~~ 48 (185)
.||++.-+++ +...- ...|.+.|.++|++|.++.|+...
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 5888877776 44444 789999999999999999887654
No 68
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=63.84 E-value=7.3 Score=28.26 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=30.4
Q ss_pred ceEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQ---GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~---GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+|+++|+-|. -=.+++.+|++.|.++|.+|.|...+-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 47888877554 234899999999999999999987653
No 69
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=63.81 E-value=10 Score=25.15 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=24.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++|+++- .|.+- ..+++.|.++|++|+++...
T Consensus 4 ~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 47888882 26554 46789999999999998653
No 70
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=63.25 E-value=7.6 Score=28.28 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=29.9
Q ss_pred ceEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQ---GHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~---GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+|+++|+-|. -=.+++.+|++.|.++|.+|.|...+
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 47888877554 23489999999999999999998765
No 71
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=62.74 E-value=5 Score=27.74 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=25.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.|++++- .|.+- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45788773 35554 78899999999999999764
No 72
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=62.64 E-value=7.7 Score=28.95 Aligned_cols=43 Identities=28% Similarity=0.275 Sum_probs=32.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEcCCcchhhh
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHS-KGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~-rGh~Vt~it~~~~~~~~ 51 (185)
+.||++.-.++.+=+ =...|.++|.+ +|++|.++.++...+.+
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 468888888886644 45899999999 89999999988766544
No 73
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=62.61 E-value=6.6 Score=29.49 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=24.1
Q ss_pred CCceEEE-eCCccc-hHHHHHHHhCCCcEEEccc
Q 029948 115 PQVTCVV-SDGIMG-FGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI-~D~~~~-~~~~vA~~lgiP~i~~~~~ 146 (185)
+.||++| .|+... -+..-|.++|||.|.+.=+
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 3578766 798664 3677899999999988643
No 74
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=62.25 E-value=7.8 Score=28.70 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=30.1
Q ss_pred ceEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQ---GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~---GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+|+++|.-|. ==.+++.+|++.|.++|.+|.|...+-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 47788876544 234899999999999999999988653
No 75
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=62.24 E-value=7.4 Score=30.17 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=24.5
Q ss_pred CCceEEE-eCCccc-hHHHHHHHhCCCcEEEccc
Q 029948 115 PQVTCVV-SDGIMG-FGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI-~D~~~~-~~~~vA~~lgiP~i~~~~~ 146 (185)
+.||+|| .|+... -+..-|.++|||+|.+.=+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4688776 798663 3677899999999987543
No 76
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=61.77 E-value=15 Score=24.16 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=22.4
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|..++. +..+.+++ ++|++.++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 36999999987754 55555443 47877766644
No 77
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=61.57 E-value=8.2 Score=28.69 Aligned_cols=38 Identities=24% Similarity=0.318 Sum_probs=30.1
Q ss_pred ceEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQ---GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~---GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+|+++|.-|. ==.+++.+|++.|.++|.+|.|...+-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 47788876544 234899999999999999999987653
No 78
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=61.34 E-value=8.3 Score=28.06 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=30.3
Q ss_pred ceEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQ---GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~---GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+|+++|+-|. -=..++.+|++.|.++|.+|.|...+-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 47788876554 224799999999999999999987653
No 79
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=61.02 E-value=63 Score=26.09 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=23.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++.||+++...- .+ | .+.++..+.|++|+++.+..
T Consensus 4 ~~k~l~Il~~~~-~~--~--~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 4 RNKNLAIICQNK-HL--P--FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCCEEEEECCCT-TC--C--HHHHHHHHTTCEEEEEEETT
T ss_pred CCcEEEEECCCh-hH--H--HHHHHHHHCCCEEEEEECCC
Confidence 345788776443 22 1 35677788899999986543
No 80
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=60.99 E-value=7.1 Score=30.20 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=24.4
Q ss_pred CCceEEE-eCCccch-HHHHHHHhCCCcEEEccc
Q 029948 115 PQVTCVV-SDGIMGF-GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~~ 146 (185)
+.||+|| .|+...- +..-|.++|||+|.++=+
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 4688766 7986643 677899999999988543
No 81
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=60.51 E-value=12 Score=24.99 Aligned_cols=33 Identities=24% Similarity=0.120 Sum_probs=22.4
Q ss_pred CCceEEEeCCccch--HHHHHHHh---------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL---------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l---------giP~i~~~~~~ 147 (185)
.+||+||.|..++. +.++.+++ .+|++.+....
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 47999999987754 56666554 26777766543
No 82
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=60.49 E-value=8.7 Score=26.99 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=29.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
..+++++..+. | +.|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 34677776655 4 999999999999999999998 5544
No 83
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.34 E-value=22 Score=26.00 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHHhh
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAASQ 156 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~~~ 156 (185)
+.+++.++++.+ .++++||-|. ....+|+++|+|.+...+.--+....+..
T Consensus 129 ~e~~~~i~~l~~----~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eSI~~Ai~e 179 (196)
T 2q5c_A 129 DEITTLISKVKT----ENIKIVVSGK---TVTDEAIKQGLYGETINSGEESLRRAIEE 179 (196)
T ss_dssp GGHHHHHHHHHH----TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHHHHHHHHH
Confidence 466677777765 4699999875 34789999999999988866655555443
No 84
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=60.05 E-value=6 Score=29.25 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=33.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhh
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNR 50 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~ 50 (185)
..||++.-.++.|=+- ..+|.+.|.++|++|.++.++...+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDL 49 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 3588888888866554 78999999999999999988865543
No 85
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=59.81 E-value=14 Score=32.03 Aligned_cols=45 Identities=7% Similarity=0.125 Sum_probs=38.9
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
++.+|++.+.++..|-....-++..|.++|++|..+...-..+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 467999999999999999999999999999999999765544433
No 86
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=59.78 E-value=6.3 Score=31.34 Aligned_cols=30 Identities=30% Similarity=0.304 Sum_probs=23.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~i 42 (185)
.+||+|+-.+-.| +.+|..|+++|++|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 3688877554434 77889999999999998
No 87
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=59.73 E-value=6.7 Score=30.63 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=38.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEcCCcchhhh
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSK--GFHVTFVNTEFNHNRF 51 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~r--Gh~Vt~it~~~~~~~~ 51 (185)
+||+++-..+.|++.-..++.+.|.++ +.++++++.+...+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 589999999999999999999999998 8999999998776544
No 88
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=59.32 E-value=13 Score=27.57 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=34.8
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+..|.+++..|.|=..-.+.++.+.+.+|++|-++..
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF 64 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQF 64 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 45789999999999999999999999999999999943
No 89
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=57.86 E-value=11 Score=29.85 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=27.5
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
|...||.|+-.++.| |-.+|+.|.++|++|+..=
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEc
Confidence 345689999888877 5579999999999999873
No 90
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=57.69 E-value=9.1 Score=26.39 Aligned_cols=37 Identities=16% Similarity=0.099 Sum_probs=29.1
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
..+++++..+. =+.|++.+++.|.++|.+|+++ ....
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 34777776655 3899999999999999999998 5443
No 91
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=57.34 E-value=27 Score=24.16 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=27.9
Q ss_pred CCCceEEE-EcCCCCCCh--HHHHHHHHHHHhCCCeE-EEEcCCc
Q 029948 6 VTKQHVIV-LPYPSQGHI--TPMMQLAKLLHSKGFHV-TFVNTEF 46 (185)
Q Consensus 6 ~~~~~il~-~~~p~~GH~--~P~l~La~~La~rGh~V-t~it~~~ 46 (185)
+++++++| ++.|-+|+- .--+.+++.+.+.||+| +++-...
T Consensus 10 ~~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 10 HGSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp -CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred CCceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 45678774 444555665 44578899999999999 7775443
No 92
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=56.17 E-value=21 Score=22.78 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=22.5
Q ss_pred CCceEEEeCCccch--HHHHHHH----hCCCcEEEcccch
Q 029948 115 PQVTCVVSDGIMGF--GAKAARI----LGIPDVQLWTASA 148 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~----lgiP~i~~~~~~~ 148 (185)
.+||+||.|..++. +..+.++ .++|.+.++...-
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 47999999987754 4555543 3578777665443
No 93
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=55.24 E-value=8.9 Score=28.26 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=31.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
|+|+|..-+|.|=-.-...||..|+++|++|.++=.+
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5788866677788899999999999999999998543
No 94
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=54.74 E-value=8.1 Score=29.46 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=24.0
Q ss_pred CceEEE-eCCccch-HHHHHHHhCCCcEEEccc
Q 029948 116 QVTCVV-SDGIMGF-GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~~ 146 (185)
.||+|| .|+...- +..-|.++|||+|.+.=+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 588776 7986643 677899999999998644
No 95
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=53.41 E-value=16 Score=27.67 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=25.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 11 CPAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788877643 456899999999999988754
No 96
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=53.26 E-value=22 Score=27.02 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=28.0
Q ss_pred ceEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPY--PSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~--p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
++.++++. .+.|=..-.+.|++.|.++|.+|.++-
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 45555554 455888999999999999999999984
No 97
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=52.30 E-value=13 Score=29.41 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=24.2
Q ss_pred CCceEEE-eCCccch-HHHHHHHhCCCcEEEccc
Q 029948 115 PQVTCVV-SDGIMGF-GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~~ 146 (185)
+.||+|| .|+...- +..-|.++|||+|.++=+
T Consensus 117 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 150 (295)
T 2zkq_b 117 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 150 (295)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHHTCCEEEEECT
T ss_pred cCCCeEEEeCCCcchhHHHHHHHhCCCEEEEecC
Confidence 3578766 7987644 677899999999988643
No 98
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=51.10 E-value=21 Score=27.10 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=26.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887754 456899999999999987753
No 99
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=51.00 E-value=9.7 Score=27.35 Aligned_cols=17 Identities=24% Similarity=0.428 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCeEEEE
Q 029948 26 MQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 26 l~La~~La~rGh~Vt~i 42 (185)
+.+|..|+++|++|+++
T Consensus 15 L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 77899999999999998
No 100
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=50.77 E-value=36 Score=21.66 Aligned_cols=33 Identities=24% Similarity=0.229 Sum_probs=21.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.++|+||.|...+. +.++.+++ ++|++.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 46899999986643 45555443 57777776544
No 101
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.56 E-value=12 Score=27.81 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=23.1
Q ss_pred CceEEE-eCCccch-HHHHHHHhCCCcEEEcc
Q 029948 116 QVTCVV-SDGIMGF-GAKAARILGIPDVQLWT 145 (185)
Q Consensus 116 ~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~ 145 (185)
.||++| .|+...- +..-|.++|||.|.+.=
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~D 142 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVD 142 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEEC
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEc
Confidence 578765 7987644 56789999999998763
No 102
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=50.09 E-value=21 Score=28.09 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=35.4
Q ss_pred CCceEEEEcCCCCCCh---HHHHHHHHHHHhCCCeEEEEcCCcch
Q 029948 7 TKQHVIVLPYPSQGHI---TPMMQLAKLLHSKGFHVTFVNTEFNH 48 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~---~P~l~La~~La~rGh~Vt~it~~~~~ 48 (185)
.++|..|++.+-.|=+ .-...|++.|.+||++||.+-.+.+.
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccce
Confidence 4689999999877665 78889999999999999999766553
No 103
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=49.11 E-value=21 Score=26.17 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
++.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777776643 346899999999999887754
No 104
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=49.03 E-value=30 Score=25.75 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=26.7
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 7 l~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 7 LEGKVALVTGASRG---IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp CTTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 34578888887743 346899999999999988754
No 105
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=49.03 E-value=20 Score=26.50 Aligned_cols=33 Identities=3% Similarity=0.053 Sum_probs=24.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 356677766542 446899999999999988753
No 106
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=48.91 E-value=33 Score=24.25 Aligned_cols=28 Identities=11% Similarity=0.010 Sum_probs=19.5
Q ss_pred CCceEEEeCCccc--h----HHHHHHHhCCCcEEE
Q 029948 115 PQVTCVVSDGIMG--F----GAKAARILGIPDVQL 143 (185)
Q Consensus 115 ~~~D~vI~D~~~~--~----~~~vA~~lgiP~i~~ 143 (185)
++| +||.+.... . ...+|+++|+|++..
T Consensus 35 krP-vil~G~g~~~~~a~~~l~~lae~~~iPV~~t 68 (170)
T 3cf4_G 35 KRP-LLMVGTLALDPELLDRVVKISKAANIPIAAT 68 (170)
T ss_dssp SSE-EEEECSTTCCHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCC-EEEECCCccchhHHHHHHHHHHHhCCCEEEC
Confidence 477 777776432 1 346899999999864
No 107
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=48.51 E-value=12 Score=28.30 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=24.6
Q ss_pred CCceEEE-eCCccch-HHHHHHHhCCCcEEEcccc
Q 029948 115 PQVTCVV-SDGIMGF-GAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~~~ 147 (185)
+.||+|| .|+...- +..-|.++|||.|.+.=+.
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 3588655 8987644 5678999999999877443
No 108
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=48.22 E-value=31 Score=23.11 Aligned_cols=33 Identities=30% Similarity=0.304 Sum_probs=20.9
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 47899999986643 44544432 57777766543
No 109
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=47.72 E-value=24 Score=27.62 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=27.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 4699999777777 67899999999999988543
No 110
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=47.67 E-value=35 Score=22.23 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=21.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +.++.+++ ++|++.+....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 36899999987643 55555443 47777776543
No 111
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=47.43 E-value=20 Score=25.48 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=32.1
Q ss_pred CceEEEEcC-CCCCCh-HHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 8 KQHVIVLPY-PSQGHI-TPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 8 ~~~il~~~~-p~~GH~-~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
.|+++++-+ |-.-=. --.+-++..|-++||+|++..++...+.+
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 577665543 444333 44678999999999999999998776554
No 112
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=47.43 E-value=29 Score=24.53 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=29.4
Q ss_pred eEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLP--YPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~--~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+++.+. -+|.|=-.-...||..|+++|.+|.++-.+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 444343 3777889999999999999999999986553
No 113
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.38 E-value=22 Score=24.41 Aligned_cols=34 Identities=21% Similarity=0.412 Sum_probs=24.9
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
...+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3468888843 4443 55789999999999998654
No 114
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=46.77 E-value=10 Score=29.15 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=24.0
Q ss_pred CCceEEE-eCCccch-HHHHHHHhCCCcEEEccc
Q 029948 115 PQVTCVV-SDGIMGF-GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~~ 146 (185)
+.||+|| .|+...- +..-|.++|||+|.+.-+
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 146 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIALCDS 146 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEECCCS
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEEEecC
Confidence 3688766 7986643 677899999999987643
No 115
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=46.49 E-value=45 Score=24.15 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=25.6
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 11 VIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 11 il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
|+++..+...+-....++++.+.++|++|.++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 4455566656677788899999999999888753
No 116
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=46.03 E-value=14 Score=30.99 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=27.8
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+++|.++-.+..| +.+|..|+++||+|+++-..
T Consensus 6 ~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 467999999766655 56899999999999998543
No 117
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=45.96 E-value=15 Score=28.98 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
-.+||.|+-.+..| ..+++.|++.||+|+++.-.
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 35889988776666 57899999999999998643
No 118
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=45.74 E-value=30 Score=28.90 Aligned_cols=40 Identities=10% Similarity=-0.014 Sum_probs=30.8
Q ss_pred CCCceEEEEcCCCCCC--hHHHHHHHHH--HHhCCCeEEEEcCC
Q 029948 6 VTKQHVIVLPYPSQGH--ITPMMQLAKL--LHSKGFHVTFVNTE 45 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH--~~P~l~La~~--La~rGh~Vt~it~~ 45 (185)
.+++||+++.....+| -.-+..|++. |.++||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 4568999988765555 3557889999 77789999999864
No 119
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=45.51 E-value=12 Score=31.62 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=27.5
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+.||+++-.+.-| +.+++.|..+|++||++....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 45799998766555 577899999999999997654
No 120
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=45.46 E-value=19 Score=28.55 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=27.4
Q ss_pred ceEEEEcCCCC--CChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQ--GHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~--GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+|++++++|- |+= +.+||.|.++|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 58999998874 332 78999999999999998643
No 121
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=45.23 E-value=48 Score=21.15 Aligned_cols=33 Identities=18% Similarity=0.083 Sum_probs=21.0
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 36999999987643 44444321 57877776543
No 122
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=45.13 E-value=34 Score=22.28 Aligned_cols=37 Identities=11% Similarity=0.125 Sum_probs=29.1
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.++|++++..|.|+-.-.-.+-+.+.++|.++.+-+
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 3589999999999998666677788888898765543
No 123
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=44.67 E-value=29 Score=26.07 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.+.++++..+.| -=..++++|+++|++|.++.
T Consensus 10 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 10 KNKVIVIAGGIKN---LGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEE
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEe
Confidence 4578888888755 35789999999999998874
No 124
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=44.66 E-value=33 Score=26.03 Aligned_cols=34 Identities=18% Similarity=0.070 Sum_probs=26.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++..
T Consensus 30 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 30 AGRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 3577888887753 346899999999999988763
No 125
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=44.47 E-value=18 Score=27.55 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=18.4
Q ss_pred HHHHHHHHHhCCCeEEEEcCCc
Q 029948 25 MMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 25 ~l~La~~La~rGh~Vt~it~~~ 46 (185)
-..+|++|+++|++|+++..+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 3578999999999999997653
No 126
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=44.27 E-value=18 Score=27.32 Aligned_cols=32 Identities=19% Similarity=0.086 Sum_probs=23.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|+++-.+..| ..+++.|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 467777555444 36899999999999998643
No 127
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=44.25 E-value=16 Score=28.13 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=22.9
Q ss_pred CceEEE-eCCccch-HHHHHHHhCCCcEEEcc
Q 029948 116 QVTCVV-SDGIMGF-GAKAARILGIPDVQLWT 145 (185)
Q Consensus 116 ~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~ 145 (185)
.||+|| .|+...- +..-|.++|||.|.++-
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~D 148 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALTD 148 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEEC
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEEc
Confidence 578765 7987643 56789999999998763
No 128
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=44.17 E-value=47 Score=23.52 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=27.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.++++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 45555555667778899999999999998877654
No 129
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=43.98 E-value=43 Score=21.58 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=20.6
Q ss_pred CCceEEEeCCccc-------hHHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMG-------FGAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~-------~~~~vA~~l-----giP~i~~~~~~ 147 (185)
.++|+||.|...+ .+..+.+++ ++|++.+....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 3699999987654 244444332 57887776544
No 130
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=43.95 E-value=35 Score=26.67 Aligned_cols=39 Identities=18% Similarity=0.067 Sum_probs=26.6
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 029948 1 MGSIGVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~i 42 (185)
|.+.-.-+.+.+++++.+.| -=..++++|+++|++|.+.
T Consensus 1 M~~~~~l~gk~~lVTGas~G---IG~~~a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 1 MASPLRFDGRVVLVTGAGGG---LGRAYALAFAERGALVVVN 39 (319)
T ss_dssp --CCCCCTTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEE
Confidence 44432234577888877643 4467899999999999886
No 131
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=43.68 E-value=25 Score=25.81 Aligned_cols=36 Identities=8% Similarity=0.130 Sum_probs=25.1
Q ss_pred CCCceEEEEcCCC---CCChHHHHHHHHHHHhCCCeEEE
Q 029948 6 VTKQHVIVLPYPS---QGHITPMMQLAKLLHSKGFHVTF 41 (185)
Q Consensus 6 ~~~~~il~~~~p~---~GH~~P~l~La~~La~rGh~Vt~ 41 (185)
..+++|.++.+.. .-+..-..+|++.|+++|+.|..
T Consensus 11 ~~~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~ 49 (189)
T 3sbx_A 11 PGRWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVW 49 (189)
T ss_dssp --CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEE
Confidence 3458899998755 12345678899999999986544
No 132
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=43.63 E-value=44 Score=21.76 Aligned_cols=33 Identities=12% Similarity=0.069 Sum_probs=22.1
Q ss_pred CCceEEEeCCccch--HHHHHHHh----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ .+|++.+....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 36899999987643 55555544 57877766544
No 133
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=43.57 E-value=42 Score=21.72 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=21.0
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 47999999987643 45555433 46766665543
No 134
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=43.54 E-value=63 Score=24.22 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccchHHHHHH
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTASACGFLAA 154 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~~~~~~~~ 154 (185)
+.+++.++++.+ .++++||-|. ....+|+++|+|.+...+ .-+....+
T Consensus 141 ee~~~~i~~l~~----~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s-~eSI~~Ai 188 (225)
T 2pju_A 141 EDARGQINELKA----NGTEAVVGAG---LITDLAEEAGMTGIFIYS-AATVRQAF 188 (225)
T ss_dssp HHHHHHHHHHHH----TTCCEEEESH---HHHHHHHHTTSEEEESSC-HHHHHHHH
T ss_pred HHHHHHHHHHHH----CCCCEEECCH---HHHHHHHHcCCcEEEECC-HHHHHHHH
Confidence 566777777765 4699999875 347899999999998884 43333333
No 135
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=43.28 E-value=59 Score=20.76 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=21.9
Q ss_pred CceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
++|+||.|..++. +..+.+++ ++|++.++...
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 6899999987754 55665543 46777766544
No 136
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=43.26 E-value=35 Score=22.09 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=21.9
Q ss_pred CceEEEeCCccc---hHHHHHHH----hCCCcEEEcccch
Q 029948 116 QVTCVVSDGIMG---FGAKAARI----LGIPDVQLWTASA 148 (185)
Q Consensus 116 ~~D~vI~D~~~~---~~~~vA~~----lgiP~i~~~~~~~ 148 (185)
+||+||.|...+ .+..+.++ .++|++.+....-
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 689999997653 24444443 3688887766543
No 137
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=43.07 E-value=57 Score=20.17 Aligned_cols=32 Identities=19% Similarity=-0.004 Sum_probs=20.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
.+||+||.|...+. +..+.+++ ++|.+.+...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 36899999987643 45544433 4677766654
No 138
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=43.03 E-value=17 Score=28.55 Aligned_cols=33 Identities=15% Similarity=0.250 Sum_probs=25.1
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
...++|+++-.+..| ..+|..|++.||+|+++.
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~ 49 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIA 49 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEE
Confidence 346889999776655 567899999999999993
No 139
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=43.01 E-value=29 Score=26.37 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=26.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4578888887753 3468999999999999887643
No 140
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=42.96 E-value=37 Score=26.41 Aligned_cols=39 Identities=21% Similarity=0.356 Sum_probs=29.2
Q ss_pred CCCceEEEEcCCCCCChHHH--HHHHHHHHhCC-CeEEEEcCC
Q 029948 6 VTKQHVIVLPYPSQGHITPM--MQLAKLLHSKG-FHVTFVNTE 45 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~--l~La~~La~rG-h~Vt~it~~ 45 (185)
.++.|++++.. ..+|-.+- -.|.+.|.+.| ++|++....
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 35789999944 44886443 57888888898 999998764
No 141
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=42.93 E-value=44 Score=25.17 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=25.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 8 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 8 AGKVVVVTGGGRG---IGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4467778776642 346889999999999988753
No 142
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=42.93 E-value=16 Score=24.76 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=26.8
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
..+.|++++-++..| ..+++.|.++|++|+++....
T Consensus 5 ~~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 345688888654433 578999999999999997654
No 143
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.92 E-value=27 Score=26.94 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=26.9
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+++|+++..+ ....+++++.++|++|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4688888765 56789999999999999987664
No 144
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=42.87 E-value=38 Score=25.24 Aligned_cols=49 Identities=10% Similarity=0.041 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
..++++++...+..-....-+||+|--...+...|+++|||+..+.+..
T Consensus 14 snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~ 62 (211)
T 3p9x_A 14 TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKT 62 (211)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGG
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhh
Confidence 3456666665432100146688888655556789999999998876654
No 145
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=42.78 E-value=41 Score=21.05 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=21.5
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccch
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTASA 148 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~~ 148 (185)
+||+||.|...+. +.++.+++ ++|.+.+....-
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 6899999987653 45555443 477777665443
No 146
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=42.71 E-value=30 Score=27.59 Aligned_cols=39 Identities=21% Similarity=0.082 Sum_probs=33.3
Q ss_pred CceEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPY-PSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~-p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
..+|+++.. +|.|=-.-...||..|+++|.+|-++..+.
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456776665 777999999999999999999999998774
No 147
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=42.62 E-value=30 Score=25.83 Aligned_cols=36 Identities=6% Similarity=0.031 Sum_probs=28.8
Q ss_pred CceEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPY--PSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~--p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+++-+++++ ++.|=..-...|++.|+++|.+|.++-
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 455555554 466888999999999999999999974
No 148
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=42.50 E-value=40 Score=26.81 Aligned_cols=39 Identities=23% Similarity=0.220 Sum_probs=32.9
Q ss_pred CceEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPY-PSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~-p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
..+|+++.. +|.|=-.-...||..|+++|++|-++..+.
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345666655 778999999999999999999999998776
No 149
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=42.00 E-value=53 Score=20.86 Aligned_cols=32 Identities=25% Similarity=0.259 Sum_probs=21.1
Q ss_pred CceEEEeCCccch---HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF---GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~---~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 50 ~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp CCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 6999999976542 44444433 57888776554
No 150
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=41.85 E-value=40 Score=22.38 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=21.3
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|+|.+....
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 47999999987643 44444432 47777666544
No 151
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=41.83 E-value=23 Score=27.60 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=26.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+||+++-.++.| ..++..|++.||+|+++.-..
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc
Confidence 678888777776 346899999999999997654
No 152
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=41.66 E-value=41 Score=24.79 Aligned_cols=34 Identities=24% Similarity=0.189 Sum_probs=26.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.++++..+.| -=..++++|+++|++|.++...
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 467888888754 4578999999999999886443
No 153
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=41.58 E-value=46 Score=20.68 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=21.8
Q ss_pred CceEEEeCCccch--HHHHHHH----hCCCcEEEcccch
Q 029948 116 QVTCVVSDGIMGF--GAKAARI----LGIPDVQLWTASA 148 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~----lgiP~i~~~~~~~ 148 (185)
+||+||.|...+. +..+.++ -++|.+.+....-
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 6899999986643 4444443 3588887766543
No 154
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=41.57 E-value=28 Score=30.87 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=32.3
Q ss_pred CCCCCceEEEEcCCCC---CChHHHHH-HHHHHHhC-CCeEEEEcCCcc
Q 029948 4 IGVTKQHVIVLPYPSQ---GHITPMMQ-LAKLLHSK-GFHVTFVNTEFN 47 (185)
Q Consensus 4 ~~~~~~~il~~~~p~~---GH~~P~l~-La~~La~r-Gh~Vt~it~~~~ 47 (185)
++.+..+++..|+.+. ||..|++. |.+-+... ||+|+++..+..
T Consensus 378 ~~~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 378 APAKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp CCSSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CCCCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 4566788998887776 78888888 55444443 899999987754
No 155
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=41.48 E-value=35 Score=26.87 Aligned_cols=39 Identities=18% Similarity=0.088 Sum_probs=32.3
Q ss_pred ceEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 9 QHVIVLPY-PSQGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 9 ~~il~~~~-p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
.+|+++.. +|.|=-.-...||..|+++|++|-++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 45665544 7789999999999999999999999977654
No 156
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=41.44 E-value=44 Score=25.52 Aligned_cols=35 Identities=9% Similarity=0.140 Sum_probs=27.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 46 ~gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 46 KGKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888887753 3468999999999999887543
No 157
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=41.42 E-value=37 Score=21.95 Aligned_cols=32 Identities=19% Similarity=0.049 Sum_probs=21.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|...+. +.++.+++ ++|++.+....
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 6899999987643 45555443 46777766544
No 158
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=41.35 E-value=78 Score=27.03 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=27.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhh
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRF 51 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~ 51 (185)
+++-++++. ++-.-++++++.|.+.|+++ +++.++.+.+
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI--~ATgGTak~L 47 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEI--ISTGSTAKTI 47 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEE--EECHHHHHHH
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEE--EEcchHHHHH
Confidence 345555554 45667899999999999765 4677776655
No 159
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=41.31 E-value=62 Score=20.13 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=21.9
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccch
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTASA 148 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~~ 148 (185)
.+||++|.|...+. +..+.+++ ++|++.+....-
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 36899999987643 44444433 478777766543
No 160
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=41.29 E-value=50 Score=24.50 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=25.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+. .-=..++++|+++|++|.++.-
T Consensus 14 ~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 14 NKVALVTASTD---GIGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp TCEEEESSCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 46777877664 2356799999999999988754
No 161
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=41.28 E-value=56 Score=25.32 Aligned_cols=54 Identities=13% Similarity=0.007 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccch--HHHHHHHhCCCcEEEcccchHHHHHHhh
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGF--GAKAARILGIPDVQLWTASACGFLAASQ 156 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~~~~~~~~~~~~~~~ 156 (185)
..++++.+.+++ .+..||+++...+- +..+|++.|++.+.+.+.+...+.++.+
T Consensus 224 ~~l~~l~~~ik~----~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m~~ 279 (291)
T 1pq4_A 224 QELKQLIDTAKE----NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNLKA 279 (291)
T ss_dssp HHHHHHHHHHHT----TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHHHH
Confidence 456667666654 46889999887754 4569999999998887776644444444
No 162
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=41.28 E-value=58 Score=21.72 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=24.8
Q ss_pred EEcCCCCC--ChHHHHHHHHHHHhCCCeE-EEEcCCcc
Q 029948 13 VLPYPSQG--HITPMMQLAKLLHSKGFHV-TFVNTEFN 47 (185)
Q Consensus 13 ~~~~p~~G--H~~P~l~La~~La~rGh~V-t~it~~~~ 47 (185)
+++.+..| ....-+.++..+.+.||+| +++-...-
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 33443344 3467799999999999999 88765543
No 163
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=41.17 E-value=45 Score=22.04 Aligned_cols=43 Identities=19% Similarity=0.060 Sum_probs=26.1
Q ss_pred HHHHHHHHhhCCCCCCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 101 FLELLGKLNSAGNVPQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 101 ~~~ll~~l~~~~~~~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.++.++.+.+ .+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 55 ~~~al~~l~~----~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 55 GQEAIQLLEK----ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHHTT----SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHhhc----cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 3445555433 47999999987643 45555433 47777766554
No 164
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=40.90 E-value=42 Score=26.64 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=27.2
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
-+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 43 l~gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r 77 (346)
T 3kvo_A 43 LAGCTVFITGASRG---IGKAIALKAAKDGANIVIAAK 77 (346)
T ss_dssp TTTCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCCCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEEC
Confidence 34578888888753 346889999999999988753
No 165
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=40.89 E-value=30 Score=29.79 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=32.0
Q ss_pred ceEEEEcCCCCCCh---HHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 9 QHVIVLPYPSQGHI---TPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 9 ~~il~~~~p~~GH~---~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
+|.+|++.+..|++ .-...|||.|.+||++|+.+-...+
T Consensus 3 ~~~i~v~gg~~s~~gk~~~~~~l~~~l~~~g~~v~~~k~~py 44 (545)
T 1s1m_A 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY 44 (545)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECC
T ss_pred ceEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeeeecccc
Confidence 46778887777777 7888999999999999999876533
No 166
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=40.75 E-value=30 Score=24.12 Aligned_cols=33 Identities=12% Similarity=0.003 Sum_probs=21.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|..++. +.++.+++ ++|++.++...
T Consensus 50 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 50 EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 47999999987754 44544432 47777766554
No 167
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=40.71 E-value=36 Score=25.91 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=29.6
Q ss_pred CCceEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 7 TKQHVIVLPYP--SQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 7 ~~~~il~~~~p--~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+++.++++.. +.|=..-.+.|++.|.++|.+|.++-
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 45666666554 45888999999999999999999984
No 168
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.48 E-value=38 Score=25.51 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=25.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 20 ~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 20 RGRVALVTGGSRG---LGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3577788876642 346899999999999988754
No 169
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=40.36 E-value=34 Score=25.49 Aligned_cols=46 Identities=13% Similarity=0.194 Sum_probs=31.1
Q ss_pred HHHHHHHHH-HhhCCCCCCceEEEeCCccc---------hHHHHHHHhCCCcEEEcccchH
Q 029948 99 APFLELLGK-LNSAGNVPQVTCVVSDGIMG---------FGAKAARILGIPDVQLWTASAC 149 (185)
Q Consensus 99 ~~~~~ll~~-l~~~~~~~~~D~vI~D~~~~---------~~~~vA~~lgiP~i~~~~~~~~ 149 (185)
+.+.+.+++ +. .++|++|+|...+ ...++|+.++.|++.+......
T Consensus 97 ~~i~~~~~~~l~-----~~~D~vlIEgaggl~~p~~~~~~~adla~~l~~pviLV~~~~~~ 152 (228)
T 3of5_A 97 ENLKQFIEDKYN-----QDLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAIKVG 152 (228)
T ss_dssp HHHHHHHHGGGG-----SSCSEEEEEEEEETTCBSSSSCBHHHHHHHHTCCEEEEEECSTT
T ss_pred HHHHHHHHHHHH-----ccCCEEEEECCCccccccccchhHHHHHHHcCCCEEEEEcCCcc
Confidence 344555554 43 3689999886432 2478999999999887766543
No 170
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=40.32 E-value=63 Score=20.98 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=21.0
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 50 AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 46899999987644 44444432 46777666543
No 171
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=40.30 E-value=47 Score=25.28 Aligned_cols=42 Identities=14% Similarity=0.027 Sum_probs=30.6
Q ss_pred CCCCCCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 1 MGSIGVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
|...=..+.|++++|..+.| -=..++++|+++|.+|.+..-.
T Consensus 1 M~n~f~L~GKvalVTGas~G---IG~aiA~~la~~Ga~Vvi~~r~ 42 (247)
T 4hp8_A 1 MKNPFSLEGRKALVTGANTG---LGQAIAVGLAAAGAEVVCAARR 42 (247)
T ss_dssp --CTTCCTTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCcCCCCCEEEEeCcCCH---HHHHHHHHHHHcCCEEEEEeCC
Confidence 33332345689999998875 4578999999999999887543
No 172
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=40.22 E-value=26 Score=27.77 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=23.5
Q ss_pred CceEEE-eCCccch-HHHHHHHhCCCcEEEccc
Q 029948 116 QVTCVV-SDGIMGF-GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI-~D~~~~~-~~~vA~~lgiP~i~~~~~ 146 (185)
.||+|| .|+...- +..-|.++|||.|.++-+
T Consensus 122 ePdllvV~Dp~~d~qAI~EA~~lnIPtIALvDT 154 (305)
T 3iz6_A 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDT 154 (305)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECT
T ss_pred CCceeEEeCcccchHHHHHHHHcCCCEEEEEcC
Confidence 578765 7987644 567899999999987643
No 173
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=40.21 E-value=57 Score=22.92 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=25.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.++++-.+..|.-.-+..+++.|+++|+.|..+-
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecc
Confidence 3444444555667788999999999999887764
No 174
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=40.18 E-value=31 Score=29.72 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=32.2
Q ss_pred ceEEEEcCCCCCCh---HHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 9 QHVIVLPYPSQGHI---TPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 9 ~~il~~~~p~~GH~---~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
+|.+|++.+..|++ .-...|||.|.+||++|+.+-...+
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py 53 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPY 53 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECS
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccc
Confidence 37788887777776 7789999999999999999876543
No 175
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=40.17 E-value=43 Score=25.90 Aligned_cols=43 Identities=19% Similarity=0.092 Sum_probs=30.7
Q ss_pred CCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchh
Q 029948 5 GVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHN 49 (185)
Q Consensus 5 ~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~ 49 (185)
..+++||++.-==|. +--=+..|.+.|.+ +|+|+++.+...+.
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 345689988876554 44557888999987 88999999887653
No 176
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=39.96 E-value=57 Score=20.41 Aligned_cols=34 Identities=21% Similarity=0.068 Sum_probs=21.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh----CCCcEEEcccch
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL----GIPDVQLWTASA 148 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l----giP~i~~~~~~~ 148 (185)
.+||+||.|...+. +..+.+++ ++|.+.+....-
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 36899999987643 44444433 577776665443
No 177
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=39.96 E-value=24 Score=27.58 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=34.7
Q ss_pred CCceEEEEcCCCCCCh---HHHHHHHHHHHhCCCeEEEEcCCcch
Q 029948 7 TKQHVIVLPYPSQGHI---TPMMQLAKLLHSKGFHVTFVNTEFNH 48 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~---~P~l~La~~La~rGh~Vt~it~~~~~ 48 (185)
.++|..|++.+-.|=+ .-...|++.|.+||++||.+-.+.+.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 3589999998877655 78899999999999999998666553
No 178
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=39.95 E-value=43 Score=24.68 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=23.4
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+. .-=..++++|+++|++|.++.-
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566766653 2346789999999999988753
No 179
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=39.94 E-value=42 Score=22.30 Aligned_cols=33 Identities=24% Similarity=0.130 Sum_probs=19.6
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 36899998876542 44444332 46777665544
No 180
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=39.85 E-value=44 Score=21.30 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=19.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 47999999986643 34444332 47877776654
No 181
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=39.74 E-value=49 Score=24.45 Aligned_cols=47 Identities=19% Similarity=0.228 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEccc
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~ 146 (185)
.++++++.+.+.......-+||++.--..+...|+++|||++.+.+.
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 59 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHK 59 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECcc
Confidence 34556655432110024567888876666788999999999877664
No 182
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=39.62 E-value=30 Score=25.74 Aligned_cols=32 Identities=16% Similarity=0.007 Sum_probs=23.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
||.++++..+.| + =..++++|+++|++|.++.
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~ 32 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHD 32 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEe
Confidence 356777776643 2 3679999999999988864
No 183
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=39.57 E-value=21 Score=27.70 Aligned_cols=46 Identities=13% Similarity=0.167 Sum_probs=38.3
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHH--------HHhC-CCeEEEEcCCcchhhhh
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKL--------LHSK-GFHVTFVNTEFNHNRFI 52 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~--------La~r-Gh~Vt~it~~~~~~~~~ 52 (185)
++.+|++.+.++..|-....-++.. |.++ |++|..+...-..+.+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv 173 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFI 173 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHH
Confidence 4678999999999999999999877 9999 99999998765544443
No 184
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=39.54 E-value=44 Score=25.01 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 3477888887754 347899999999999988754
No 185
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=39.50 E-value=21 Score=29.75 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=27.9
Q ss_pred CCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 6 VTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.||.++-.+..| +++|..|+++||+|+.+-..
T Consensus 6 ~~~~~~~vIGlG~vG-----~~~A~~La~~G~~V~~~D~~ 40 (446)
T 4a7p_A 6 HGSVRIAMIGTGYVG-----LVSGACFSDFGHEVVCVDKD 40 (446)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEEEcCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 346788888777766 68999999999999998643
No 186
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=39.45 E-value=40 Score=21.67 Aligned_cols=29 Identities=10% Similarity=0.028 Sum_probs=22.7
Q ss_pred CChHHHHHHHHHHHhC-CC-eEEEEcCCcch
Q 029948 20 GHITPMMQLAKLLHSK-GF-HVTFVNTEFNH 48 (185)
Q Consensus 20 GH~~P~l~La~~La~r-Gh-~Vt~it~~~~~ 48 (185)
......+.++..+++. || +|+++-...-.
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 4456779999999999 99 99888665544
No 187
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=39.42 E-value=24 Score=25.76 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=23.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
|+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 355677776632 3468899999999998887543
No 188
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=39.30 E-value=42 Score=25.55 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=27.6
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
-+.|+++++..+.| -=..++++|+++|++|.+..
T Consensus 9 L~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~ 42 (261)
T 4h15_A 9 LRGKRALITAGTKG---AGAATVSLFLELGAQVLTTA 42 (261)
T ss_dssp CTTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEE
Confidence 34589999998875 34788999999999998764
No 189
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=39.28 E-value=48 Score=24.66 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=24.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 9 ~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 9 GCTALVTGGSRG---IGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777776542 346889999999999988753
No 190
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=39.20 E-value=53 Score=23.60 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=27.1
Q ss_pred EEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEE
Q 029948 11 VIVLPY-PSQGHITPMMQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 11 il~~~~-p~~GH~~P~l~La~~La~rGh~Vt~i 42 (185)
|.+... +|.|=-.-...||..|+++|++|-++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 444443 78899999999999999999999886
No 191
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=39.01 E-value=46 Score=21.80 Aligned_cols=32 Identities=9% Similarity=0.000 Sum_probs=20.2
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
.+||+||.|...+. +.++.+++ ++|++.+...
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 36899999986643 45555433 4676666543
No 192
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=38.88 E-value=37 Score=23.94 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
..|+++ .+..|+-.-+..+++.|+++|++|..+--
T Consensus 23 ~~vv~~-HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 23 TGVVLL-HAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp EEEEEE-CCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred ceEEEe-CCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 345444 44557777789999999999999877643
No 193
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=38.88 E-value=39 Score=24.79 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=27.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
...|+++.+.+ |+..-+..+++.|+++|++|..+--+
T Consensus 46 ~p~vv~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKN-FCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCC-CcchHHHHHHHHHHHCCCeEEEeecC
Confidence 44566666544 55566889999999999999887544
No 194
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.85 E-value=70 Score=20.94 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=30.1
Q ss_pred CCCceEEEEcCCCCCChH-HHHHHHHHHHhCCCeEEEEc
Q 029948 6 VTKQHVIVLPYPSQGHIT-PMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 6 ~~~~~il~~~~p~~GH~~-P~l~La~~La~rGh~Vt~it 43 (185)
....+|++++..|.|.-. -...|-+.+.++|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 345689999999999977 46778888888998865543
No 195
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=38.82 E-value=40 Score=21.27 Aligned_cols=32 Identities=13% Similarity=0.045 Sum_probs=21.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|...+. +.++.+++ ++|++.++...
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 6899999986643 45544433 47777766544
No 196
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=38.79 E-value=25 Score=26.68 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=28.2
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+++|.|+-.+..|- .|++.|.++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 368999999888874 5899999999999987653
No 197
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=38.58 E-value=52 Score=20.84 Aligned_cols=32 Identities=19% Similarity=0.006 Sum_probs=20.5
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~ 146 (185)
.+||+||.|...+. +.++.+++ ++|++.+...
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 36899999987653 56666654 3455555443
No 198
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=38.49 E-value=55 Score=20.47 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=21.5
Q ss_pred CCceEEEeCCccch--HHHHHHHh----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|.+.+....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 36899999986643 55555544 46776665544
No 199
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=38.37 E-value=27 Score=27.27 Aligned_cols=29 Identities=14% Similarity=0.303 Sum_probs=25.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
||.|+-.+-+|. ++++.|.++||+|++..
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 788888888884 78999999999999985
No 200
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=38.28 E-value=49 Score=24.88 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 9 ~gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 9 QDKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 3577888887753 457899999999999988743
No 201
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=38.26 E-value=40 Score=25.11 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 5 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 5 KEKVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888887753 447899999999999988653
No 202
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=38.22 E-value=59 Score=20.87 Aligned_cols=33 Identities=6% Similarity=-0.038 Sum_probs=21.0
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 36899999986643 44444433 46777666544
No 203
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=38.21 E-value=66 Score=20.40 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=20.3
Q ss_pred CCceEEEeCCccch--HHHHHHHh------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ..|.+.+.+..
T Consensus 49 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~ 89 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGL 89 (132)
T ss_dssp TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCC
Confidence 46899999987644 45555443 24555555443
No 204
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=38.08 E-value=42 Score=21.09 Aligned_cols=31 Identities=19% Similarity=0.180 Sum_probs=19.2
Q ss_pred CceEEEeCCccch--HHHHHHHh-------CCCcEEEccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~ 146 (185)
+||+||.|...+. +..+.+++ ++|++.+...
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 6899999987643 45555433 4677766543
No 205
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=38.04 E-value=39 Score=25.19 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788877743 357899999999999988754
No 206
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=37.93 E-value=9.1 Score=32.05 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=26.6
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.|||+++-++-.| ..||+.|.++||+|+++=..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 46888887665544 46999999999999998544
No 207
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=37.91 E-value=40 Score=28.10 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=20.6
Q ss_pred CceEEEeCCccchHHHHHHHhCCCcEEE
Q 029948 116 QVTCVVSDGIMGFGAKAARILGIPDVQL 143 (185)
Q Consensus 116 ~~D~vI~D~~~~~~~~vA~~lgiP~i~~ 143 (185)
++|++|... +...+|+++|||++-+
T Consensus 375 ~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 689999875 4677999999999854
No 208
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=37.86 E-value=49 Score=21.45 Aligned_cols=32 Identities=13% Similarity=-0.019 Sum_probs=19.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|. .+. +..+.+++ ++|++.+....
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 3689999998 543 33444332 47877766544
No 209
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=37.80 E-value=31 Score=26.85 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=24.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
||.|+-.+-+|. ++++.|+++||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 799998888874 78999999999999874
No 210
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=37.80 E-value=23 Score=27.13 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=24.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|+++-.+..| ..+++.|+++||+|+++...
T Consensus 4 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 688888665545 46789999999999998643
No 211
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=37.63 E-value=56 Score=22.05 Aligned_cols=40 Identities=5% Similarity=0.052 Sum_probs=28.4
Q ss_pred CceEEEEcC-C--CCCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 8 KQHVIVLPY-P--SQGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 8 ~~~il~~~~-p--~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
..+++|+-. + +......-+.+|...++.||+|+++-+..-
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 346664444 3 345667888899999999999998865543
No 212
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=37.61 E-value=1.2e+02 Score=22.10 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=49.7
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEecCCCCCCCCCCCCCCHHHHHHHHHHhCcHHHHHH
Q 029948 25 MMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETIPDGLPPSDRDATQDLPALCSSIRKTCLAPFLEL 104 (185)
Q Consensus 25 ~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 104 (185)
..++.+.|.++|..+.++|+........+..|.. ..+.++...++....+ .+.. .+...
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~gl~-----~~fd~i~~~~~~~~~K----P~p~------------~~~~a 158 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAALELR-----EFFTFCADASQLKNSK----PDPE------------IFLAA 158 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHTTCG-----GGCSEECCGGGCSSCT----TSTH------------HHHHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhhhhc-----cccccccccccccCCC----CcHH------------HHHHH
Confidence 4678888999999998888765544443333321 1123333222221111 1111 12222
Q ss_pred HHHHhhCCCCCCceEEE-eCCccchHHHHHHHhCCCcEEEcc
Q 029948 105 LGKLNSAGNVPQVTCVV-SDGIMGFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 105 l~~l~~~~~~~~~D~vI-~D~~~~~~~~vA~~lgiP~i~~~~ 145 (185)
++.+.- .+=+||+ -|. ......|++.|+++|.+..
T Consensus 159 ~~~lg~----~p~e~l~VgDs--~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 159 CAGLGV----PPQACIGIEDA--QAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp HHHHTS----CGGGEEEEESS--HHHHHHHHHHTCEEEEEST
T ss_pred HHHcCC----ChHHEEEEcCC--HHHHHHHHHcCCEEEEECC
Confidence 333311 1224555 564 3567889999999998764
No 213
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=37.61 E-value=23 Score=27.65 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=26.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+||+++-.++.| ..+|..|++.||+|+++.-..
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 688888666655 457889999999999997654
No 214
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=37.54 E-value=19 Score=27.94 Aligned_cols=34 Identities=24% Similarity=0.174 Sum_probs=26.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
..++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 45789999665555 46899999999999998543
No 215
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.43 E-value=40 Score=24.68 Aligned_cols=32 Identities=6% Similarity=0.118 Sum_probs=23.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 4 k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 4 GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 56677766542 346899999999999988753
No 216
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=37.42 E-value=39 Score=25.52 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 9 ~~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 9 EGKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 3477888887754 446899999999999988754
No 217
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=37.39 E-value=46 Score=26.05 Aligned_cols=32 Identities=19% Similarity=0.064 Sum_probs=21.8
Q ss_pred CceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
+||+||.........+--++.|||++.+.+..
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~~ 147 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPED 147 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCCC
Confidence 79999976543323444467899999886543
No 218
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=37.35 E-value=79 Score=23.44 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=25.6
Q ss_pred CceEEEEcCCC-CCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPS-QGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~-~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.++++..+ .| + =..++++|+++|++|.++.-.
T Consensus 21 ~~k~vlITGasg~G-I--G~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-I--GSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TTCEEEESSCSSSS-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCCc-h--HHHHHHHHHHCCCEEEEecCC
Confidence 35678888774 22 2 368999999999999887543
No 219
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=37.23 E-value=48 Score=23.36 Aligned_cols=33 Identities=33% Similarity=0.333 Sum_probs=21.9
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|..++. +.++.+++ ++|++.+....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 86 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHG 86 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 46899999987653 55555443 57888776543
No 220
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=37.15 E-value=76 Score=22.77 Aligned_cols=36 Identities=8% Similarity=0.110 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCC--hHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGH--ITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH--~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.-|+++.+ ..|+ ..-+..+++.|+++|+.|..+--.
T Consensus 47 p~vv~~HG-~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 47 DMAIIFHG-FTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEECC-TTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEEcC-CCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 34555554 4444 566889999999999998876433
No 221
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=37.10 E-value=36 Score=27.94 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=24.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
|+|.++-.+..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 477888655555 5688999999999998854
No 222
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=36.89 E-value=53 Score=25.22 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=23.5
Q ss_pred CceEEEeCCcc------chHHHHHHHhCCCcEEEcc
Q 029948 116 QVTCVVSDGIM------GFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 116 ~~D~vI~D~~~------~~~~~vA~~lgiP~i~~~~ 145 (185)
+||+|+..... ..+..+|.+||+|.++..+
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 58999975544 2468899999999998764
No 223
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=36.78 E-value=65 Score=20.84 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=20.6
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 47899999986643 44444433 47777665544
No 224
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=36.64 E-value=52 Score=25.28 Aligned_cols=35 Identities=11% Similarity=0.175 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 30 ~gk~vlVTGas~g---IG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 30 DGRAAVVTGGASG---IGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3467788877643 3468999999999998887543
No 225
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=36.63 E-value=60 Score=24.04 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=26.6
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
-+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 10 l~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 10 LNDRIILVTGASDG---IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TTTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 34578888887743 346889999999999988753
No 226
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=36.60 E-value=41 Score=25.59 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888887753 446899999999999988754
No 227
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=36.49 E-value=62 Score=20.93 Aligned_cols=33 Identities=12% Similarity=0.034 Sum_probs=20.6
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +.++.+++ ++|.+.+....
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYT 82 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 36999999987643 45544433 46666665543
No 228
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=36.34 E-value=49 Score=24.38 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=26.2
Q ss_pred CCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 16 YPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 16 ~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
-+|.|=-.-...||..|+++|.+|-++=.+
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 11 KGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 377799999999999999999999998544
No 229
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=36.27 E-value=46 Score=25.00 Aligned_cols=33 Identities=24% Similarity=0.245 Sum_probs=26.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888877753 446899999999999988765
No 230
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=36.17 E-value=43 Score=25.05 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++..
T Consensus 7 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 7 TNRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 3467888887753 346899999999999988743
No 231
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=36.16 E-value=48 Score=25.56 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=28.7
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+-|+++++..+.| -=..++++|+++|.+|.+..-
T Consensus 27 L~gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 27 LNAKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TTTCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred hCCCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 45689999998875 457899999999999987653
No 232
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=36.14 E-value=31 Score=25.80 Aligned_cols=39 Identities=28% Similarity=0.290 Sum_probs=30.2
Q ss_pred CceEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLP--YPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~--~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++++..+. -+|.|=-.-...||..|+++|.+|.++=.+.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44555444 3667888999999999999999999985443
No 233
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=36.14 E-value=54 Score=22.42 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=24.5
Q ss_pred CceEEEEcCCCCCCh-HHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHI-TPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~-~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+..|+++.+.+.+.- .-...+.+.|+++|++|..+--+
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 456888887665433 22223456798999999887543
No 234
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=36.04 E-value=39 Score=25.63 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=25.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.++++++..+.| -=..++++|+++|++|.++.-
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888887753 446899999999999987654
No 235
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=36.03 E-value=53 Score=24.95 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=24.6
Q ss_pred ceEEEEcCCC--CCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPS--QGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~--~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+.++++..+ .| -=..++++|+++|++|.++.
T Consensus 8 ~k~~lVTGas~~~G---IG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 8 GKRAFIAGIADDNG---YGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp TCEEEEECCSSSSS---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCCC---hHHHHHHHHHHCCCeEEEee
Confidence 3677888876 44 34689999999999998863
No 236
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=36.01 E-value=45 Score=25.44 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=25.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+.++++..+.| -=..++++|+++|++|.++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 467888877753 45689999999999998876
No 237
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=35.98 E-value=46 Score=26.59 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=32.2
Q ss_pred CCCceEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 6 VTKQHVIVLP--YPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 6 ~~~~~il~~~--~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+++++..+. -+|.|=-.-...||..|+++|.+|-++-.+
T Consensus 140 ~~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 140 NDKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TTSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4456666554 478899999999999999999999998655
No 238
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=35.81 E-value=52 Score=24.15 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 13 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 13 TGKTSLITGASSG---IGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 4567778877643 3468999999999999887643
No 239
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=35.76 E-value=79 Score=24.11 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.++++..+.|.- -=..++++|+++|++|.++.-.
T Consensus 29 ~~k~vlVTGasg~~G-IG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 29 EGKKGVIIGVANDKS-LAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TTCEEEEECCCSTTS-HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEeCCCCCC-HHHHHHHHHHHCCCEEEEEeCC
Confidence 357788888763111 2467999999999999887543
No 240
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=35.48 E-value=73 Score=20.04 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=21.2
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 48 ~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 48 GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 46899999987653 55555544 35666665543
No 241
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=35.47 E-value=47 Score=24.77 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=25.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 367788877643 457889999999999887753
No 242
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=35.46 E-value=62 Score=23.90 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=22.9
Q ss_pred CCceEEEeCCccch--HHHHHHHh----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l----giP~i~~~~~~ 147 (185)
.+||+||.|..++. +.++.+++ ++|++.+....
T Consensus 80 ~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 80 DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 36999999988765 45555543 57877776654
No 243
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=35.31 E-value=52 Score=24.53 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 7 ~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 7 QGKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888887753 346899999999999988753
No 244
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=35.22 E-value=59 Score=24.33 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=26.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+++++++.+.| -=..++++|+++|++|.++...
T Consensus 25 ~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 25 DTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp CSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3567888887643 3478999999999999887443
No 245
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=35.13 E-value=45 Score=23.89 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=27.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+..|+++.+.+ |...-...+++.|+++|++|..+--
T Consensus 11 ~~~~vvllHG~~-~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 11 VKKHFVLVHAAF-HGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCCEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCeEEEECCCC-CCcchHHHHHHHHHhcCCeEEEecc
Confidence 345666666655 5566677899999999999887743
No 246
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=35.09 E-value=54 Score=24.33 Aligned_cols=47 Identities=19% Similarity=0.176 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEccc
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~ 146 (185)
.++++++.+.+..-....-+||+|---..+...|+++|||+..+...
T Consensus 20 nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~ 66 (209)
T 4ds3_A 20 NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRK 66 (209)
T ss_dssp HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCcc
Confidence 45556665532110013567888764445678999999999987653
No 247
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=35.04 E-value=60 Score=24.60 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 29 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVTGAGAG---IGLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEETTTTST---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888887753 3367899999999999887543
No 248
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=34.80 E-value=83 Score=20.68 Aligned_cols=33 Identities=18% Similarity=0.061 Sum_probs=20.6
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 36899999986542 44444332 57877766554
No 249
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=34.72 E-value=50 Score=24.57 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=24.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 5 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 5 KVAVVTGSTSG---IGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeC
Confidence 56777776643 357899999999999988754
No 250
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=34.65 E-value=33 Score=24.97 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=23.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.++|.++-.+..| ..+++.|+++||+|+++.
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~ 49 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYG 49 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEc
Confidence 4678888655444 567899999999999874
No 251
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=34.52 E-value=98 Score=21.17 Aligned_cols=37 Identities=8% Similarity=0.004 Sum_probs=25.9
Q ss_pred eEEEEcCCCCCChHHHHH--HHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLPYPSQGHITPMMQ--LAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~--La~~La~rGh~Vt~it~~~ 46 (185)
..+++-.++.|+...+.. +++.|+++|+.|..+-...
T Consensus 33 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 71 (210)
T 1imj_A 33 FSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPG 71 (210)
T ss_dssp CEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTT
T ss_pred ceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCC
Confidence 344444455577777777 6999999999987765443
No 252
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=34.51 E-value=55 Score=21.86 Aligned_cols=32 Identities=9% Similarity=0.013 Sum_probs=20.9
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
++|+||.|...+. +..+.+++ ++|++.+....
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALG 121 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccC
Confidence 6899999987643 45544433 47877766543
No 253
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=34.51 E-value=46 Score=24.49 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=24.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 356777776642 346889999999999988754
No 254
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.44 E-value=55 Score=21.26 Aligned_cols=32 Identities=6% Similarity=-0.040 Sum_probs=20.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 6899999986643 45555443 46666665543
No 255
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=34.43 E-value=52 Score=23.50 Aligned_cols=36 Identities=14% Similarity=0.056 Sum_probs=26.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
..|+++.+.+ |+-.-+..+++.|+++|++|..+--.
T Consensus 27 ~~vv~~hG~~-~~~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 27 PVVLCIHGIL-EQGLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp CEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEECCCC-cccchHHHHHHHhhhcCeEEEEECCC
Confidence 4566666554 55556788999999999999887533
No 256
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=34.37 E-value=44 Score=25.42 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.1
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 41 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAK 41 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3467888887753 346899999999999988753
No 257
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.36 E-value=53 Score=24.75 Aligned_cols=33 Identities=15% Similarity=0.166 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.|+++++..+.| -=..++++|+++|++|.++.
T Consensus 14 ~gk~~lVTGas~g---IG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 14 QGRVAFITGAARG---QGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEe
Confidence 4578888887753 34689999999999998874
No 258
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=34.35 E-value=56 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=28.6
Q ss_pred EEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 11 VIVLP-YPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 11 il~~~-~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
|.+.. -+|.|=-.-...||..|+++|++|.++-.+.
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 33433 3677999999999999999999999986543
No 259
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=34.31 E-value=55 Score=23.54 Aligned_cols=46 Identities=15% Similarity=-0.031 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCcc---------chHHHHHHHhCCCcEEEcccchH
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIM---------GFGAKAARILGIPDVQLWTASAC 149 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~---------~~~~~vA~~lgiP~i~~~~~~~~ 149 (185)
..+++.++.+. .++|+||+|..- ....+++..++.|++........
T Consensus 96 ~~l~~~l~~l~-----~~yD~viID~p~~l~~p~~~~~~~~~l~~~~~~~vi~v~~~~~~ 150 (224)
T 1byi_A 96 LVMSAGLRALE-----QQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLG 150 (224)
T ss_dssp HHHHHHHHHHH-----TTCSEEEEECSSSTTCEEETTEEHHHHHHHHTCCEEEEEECSTT
T ss_pred HHHHHHHHHHH-----HhCCEEEEEcCCccccCCCcchhHHHHHHHhCCCEEEEecCCCC
Confidence 45666666664 369999999872 12467888889888777655543
No 260
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=34.28 E-value=47 Score=25.21 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=26.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 26 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 26 NQRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3477888887753 3468999999999999887543
No 261
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=34.26 E-value=86 Score=20.20 Aligned_cols=21 Identities=24% Similarity=0.224 Sum_probs=14.2
Q ss_pred CCceEEEeCCccch--HHHHHHH
Q 029948 115 PQVTCVVSDGIMGF--GAKAARI 135 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~ 135 (185)
.+||+||.|...+. +.++.++
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHHH
Confidence 36899999987643 4554443
No 262
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=34.26 E-value=37 Score=25.87 Aligned_cols=32 Identities=28% Similarity=0.227 Sum_probs=23.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 577777555444 56799999999999987543
No 263
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=34.24 E-value=49 Score=25.07 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=25.7
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
..+++++++.+.| -=..++++|+++|++|.++.-
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 27 GKKIAIVTGAGSG---VGRAVAVALAGAGYGVALAGR 60 (272)
T ss_dssp -CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3577888887742 346899999999999988754
No 264
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=34.24 E-value=25 Score=27.14 Aligned_cols=32 Identities=13% Similarity=0.028 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+++|.|+-.+..| ..+++.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4689999777766 3689999999999999853
No 265
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.23 E-value=51 Score=24.85 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=26.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.|.++++..+.| -=..++++|+++|++|.+....
T Consensus 26 ~gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 26 TGRKALVTGATGG---IGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3477888887753 3468999999999999887543
No 266
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=34.23 E-value=46 Score=25.15 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=26.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.|.++++..+.| -=..++++|+++|++|.++.
T Consensus 10 ~~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 10 EGKVAFVTGAARG---QGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEe
Confidence 4578888888754 35789999999999998874
No 267
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=34.05 E-value=50 Score=26.40 Aligned_cols=40 Identities=15% Similarity=0.071 Sum_probs=34.2
Q ss_pred CCceEEEEcC-CCCCChHHHHHHHHHHH--hCCCeEEEEcCCc
Q 029948 7 TKQHVIVLPY-PSQGHITPMMQLAKLLH--SKGFHVTFVNTEF 46 (185)
Q Consensus 7 ~~~~il~~~~-p~~GH~~P~l~La~~La--~rGh~Vt~it~~~ 46 (185)
...+|+++.. +|.|=-.-...||..|+ ++|.+|-++..+.
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3467887766 77799999999999999 8999999998774
No 268
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=34.03 E-value=45 Score=24.70 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=23.6
Q ss_pred CceEEEEcCCCCCCh--HHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHI--TPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~--~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.-++++.-++.+|- .-+..+++.|+++|+.|-.+-..
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 345666766666764 34778999999999988776443
No 269
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=33.99 E-value=53 Score=24.25 Aligned_cols=33 Identities=15% Similarity=-0.040 Sum_probs=21.4
Q ss_pred CCceEEEeCCccchHHH-HHHHhCCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGFGAK-AARILGIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~~~~-vA~~lgiP~i~~~~~~ 147 (185)
+++|.||.-........ .+.+.|+|+|.+....
T Consensus 63 ~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~~ 96 (277)
T 3e61_A 63 HNCTGMISTAFNENIIENTLTDHHIPFVFIDRIN 96 (277)
T ss_dssp TTCSEEEECGGGHHHHHHHHHHC-CCEEEGGGCC
T ss_pred CCCCEEEEecCChHHHHHHHHcCCCCEEEEeccC
Confidence 46888887664433455 6677799999876543
No 270
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=33.97 E-value=27 Score=24.88 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCeEEEEcCC
Q 029948 26 MQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 26 l~La~~La~rGh~Vt~it~~ 45 (185)
..++++|+++||+|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 14 SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHhCCCEEEEEEcC
Confidence 57899999999999998644
No 271
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=33.92 E-value=20 Score=23.71 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=22.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+++++-. |.+- ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 35776654 4333 46789999999999987643
No 272
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.90 E-value=35 Score=25.64 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356778877643 3468999999999999887643
No 273
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=33.85 E-value=69 Score=23.75 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=26.1
Q ss_pred ceEEEEcCCC--CCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPS--QGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~--~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+++++.+ .| + =..++++|+++|++|.++...
T Consensus 20 ~k~vlITGas~~~g-i--G~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 20 GKVVVVTGASGPKG-M--GIEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp TCEEEETTCCSSSS-H--HHHHHHHHHHTSCEEEECBSS
T ss_pred CCEEEEECCCCCCC-h--HHHHHHHHHHCCCeEEEEeCC
Confidence 4678888876 33 2 468999999999999887543
No 274
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=33.80 E-value=95 Score=24.19 Aligned_cols=59 Identities=10% Similarity=-0.000 Sum_probs=42.0
Q ss_pred ceEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEcCCcchhhhhcccCCCCCCCCCCeeEEec
Q 029948 9 QHVIVLP-YPSQGHITPMMQLAKLLHSKGFHVTFVNTEFNHNRFIRNKGPDSLKGLPDFRFETI 71 (185)
Q Consensus 9 ~~il~~~-~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~~~~~~~~~~~~~~~~~~~i~~~~l 71 (185)
.+|++++ .+-++=+-|...|.+.+.++|++|.++-..+.........|.+. ..+.|..+
T Consensus 89 ~~Va~lsdaGdP~i~~~g~~lv~~~~~~gi~v~viPGiSA~~aA~a~~Glp~----~~f~f~g~ 148 (296)
T 3kwp_A 89 MQIAQVSDAGMPSISDPGHELVNACIDAHIPVVPLPGANAGLTALIASGLAP----QPFYFYGF 148 (296)
T ss_dssp CEEEEECSSBCTTSSHHHHHHHHHHHHTTCCEEECCCCCHHHHHHHHHSSCC----SSEEEEEE
T ss_pred ceEEEeccCCCCCCCCCchHHHHHHHHcCCCeeeCCCcccchHHHHhccCCC----CceeEEee
Confidence 4788887 78888899999999999999999998866654433334445421 34666543
No 275
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=33.80 E-value=48 Score=26.11 Aligned_cols=39 Identities=21% Similarity=0.121 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccch-HHHHHHHhCCCcEEEcc
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGF-GAKAARILGIPDVQLWT 145 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~-~~~vA~~lgiP~i~~~~ 145 (185)
..++.+++- +||+||....... ...+.+++|||++.+..
T Consensus 87 ~n~E~Ilal--------~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 87 PDLESLITL--------QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCHHHHHHH--------CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCHHHHhcC--------CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 345666643 6999997543322 23456789999998754
No 276
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=33.78 E-value=55 Score=28.07 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=33.4
Q ss_pred ceEEEEcCCCCCCh---HHHHHHHHHHHhCCCeEEEEcCCcch
Q 029948 9 QHVIVLPYPSQGHI---TPMMQLAKLLHSKGFHVTFVNTEFNH 48 (185)
Q Consensus 9 ~~il~~~~p~~GH~---~P~l~La~~La~rGh~Vt~it~~~~~ 48 (185)
+|..|++++-.|=+ .-...|++.|.+||.+||.+-.+.+.
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyl 45 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYI 45 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcce
Confidence 57888888877666 78899999999999999999766653
No 277
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=33.77 E-value=22 Score=27.60 Aligned_cols=31 Identities=26% Similarity=0.195 Sum_probs=23.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
++|+++-.+..| ..+++.|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 467777555544 4578999999999999865
No 278
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=33.67 E-value=57 Score=24.80 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=27.8
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
-+-|+++++..+.| -=..++++|+++|.+|.+..
T Consensus 7 L~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~ 40 (255)
T 4g81_D 7 LTGKTALVTGSARG---LGFAYAEGLAAAGARVILND 40 (255)
T ss_dssp CTTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECC
T ss_pred CCCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEE
Confidence 35689999998875 45789999999999987754
No 279
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=33.64 E-value=48 Score=25.92 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=31.5
Q ss_pred eEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLPY-PSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~~-p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+|+++.. +|.|=-.-...||..|+++|++|-++..+.
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5555544 788999999999999999999999998765
No 280
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=33.58 E-value=71 Score=23.62 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=23.5
Q ss_pred ceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 117 VTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 117 ~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
.-+||++.--..+...|+++|||++.+.+..
T Consensus 31 i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~ 61 (216)
T 2ywr_A 31 IELVISDNPKAYAIERCKKHNVECKVIQRKE 61 (216)
T ss_dssp EEEEEESCTTCHHHHHHHHHTCCEEECCGGG
T ss_pred EEEEEeCCCChHHHHHHHHcCCCEEEeCccc
Confidence 4578888655557789999999998876643
No 281
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=33.58 E-value=53 Score=24.63 Aligned_cols=33 Identities=9% Similarity=0.184 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 478888887753 346899999999999987754
No 282
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=33.56 E-value=49 Score=24.74 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=26.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++++..+.| -=..++++|+++|++|.++.-
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888887753 457899999999999888753
No 283
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=33.55 E-value=58 Score=24.27 Aligned_cols=46 Identities=17% Similarity=0.287 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEccc
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~ 146 (185)
.++++++.+.+.- ....-+||+|---..+...|+++|||++.+.+.
T Consensus 18 nl~all~~~~~~~-~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~ 63 (215)
T 3tqr_A 18 NLQAIIGAIQKGL-AIEIRAVISNRADAYGLKRAQQADIPTHIIPHE 63 (215)
T ss_dssp HHHHHHHHHHTTC-SEEEEEEEESCTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHcCC-CCEEEEEEeCCcchHHHHHHHHcCCCEEEeCcc
Confidence 4455555543210 024667888865555678999999999987654
No 284
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=33.48 E-value=30 Score=27.11 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=25.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++|+++-.+..| ..+++.|+++||+|+++...
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 3689988665545 34788999999999988543
No 285
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=33.48 E-value=58 Score=21.76 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=24.4
Q ss_pred CCceEEEEcCCCCCCh-HHHHHHHHHHHhCCCeEEEE
Q 029948 7 TKQHVIVLPYPSQGHI-TPMMQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~-~P~l~La~~La~rGh~Vt~i 42 (185)
++..|+++...+.+.. .-+..+++.|+++|+.|..+
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~ 39 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERP 39 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEe
Confidence 3556777776654332 24568999999999877554
No 286
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=33.40 E-value=50 Score=24.86 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=26.1
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 10 ENKVAIITGACGG---IGLETSRVLARAGARVVLADL 43 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 3477888887753 346899999999999988753
No 287
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=33.30 E-value=27 Score=27.80 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCeEEEEcCCcc
Q 029948 25 MMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 25 ~l~La~~La~rGh~Vt~it~~~~ 47 (185)
-..+|+++.++|++||+++.+..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHCCCEEEEEecCCC
Confidence 45789999999999999986543
No 288
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=33.28 E-value=47 Score=24.55 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=24.0
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45677776642 346899999999999988753
No 289
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=33.23 E-value=47 Score=25.01 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=25.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+.+++++.+.| -=..++++|+++|++|.++.
T Consensus 28 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~ 59 (266)
T 3uxy_A 28 GKVALVTGAAGG---IGGAVVTALRAAGARVAVAD 59 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEe
Confidence 477888887753 34689999999999988764
No 290
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=33.20 E-value=72 Score=22.65 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=21.8
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +.++.+++ ++|++.+....
T Consensus 45 ~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 36899999987643 45444433 57888776654
No 291
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=33.06 E-value=72 Score=23.59 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=25.8
Q ss_pred CceEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.+++++.+. |-+ =..++++|+++|++|.++.-.
T Consensus 13 ~~k~vlITGa~~~~gi--G~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSI--AYGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TTCEEEECCCCSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCCCcH--HHHHHHHHHHcCCCEEEEecc
Confidence 456777887651 222 368999999999999887543
No 292
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.01 E-value=31 Score=25.18 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCCeEEEEcCC
Q 029948 25 MMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 25 ~l~La~~La~rGh~Vt~it~~ 45 (185)
=..++++|+++||+|+++.-.
T Consensus 34 G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 34 ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHhCCCeEEEEECC
Confidence 357899999999999998644
No 293
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=33.01 E-value=66 Score=23.87 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=24.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+. - -=..++++|+++|++|.++.-
T Consensus 12 ~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 12 GRKAIVTGGSK-G--IGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp TCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-h--HHHHHHHHHHHCCCEEEEEeC
Confidence 35677776653 2 346789999999999988754
No 294
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=32.90 E-value=59 Score=24.33 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=25.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
-|+++++..+. .---=..+|++|+++|++|.+..-
T Consensus 6 gK~alVTGaa~-~~GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 6 NKTYVIMGIAN-KRSIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp TCEEEEECCCS-TTCHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-CchHHHHHHHHHHHCCCEEEEEEC
Confidence 47888888542 111247899999999999988753
No 295
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=32.87 E-value=92 Score=24.12 Aligned_cols=36 Identities=14% Similarity=0.221 Sum_probs=24.2
Q ss_pred CCceEEEE-cCCCCCChHH--HHHHHHHHHhCCCeEEEE
Q 029948 7 TKQHVIVL-PYPSQGHITP--MMQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 7 ~~~~il~~-~~p~~GH~~P--~l~La~~La~rGh~Vt~i 42 (185)
..|||+++ ..|-..-++- .-...+.|.++||+|+++
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 45888855 4465554543 335677888999999997
No 296
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=32.82 E-value=63 Score=20.03 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=21.6
Q ss_pred CceEEEeCCccch--HHHHHHHh----CCCcEEEcccch
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL----GIPDVQLWTASA 148 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l----giP~i~~~~~~~ 148 (185)
+||++|.|...+. +..+.+++ .+|.+.+....-
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (121)
T 1zh2_A 45 KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSE 83 (121)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCC
Confidence 6899999987643 55555544 467777665443
No 297
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=32.79 E-value=52 Score=24.83 Aligned_cols=46 Identities=13% Similarity=-0.008 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccc---------hHHHHHHHhCCCcEEEcccchHH
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMG---------FGAKAARILGIPDVQLWTASACG 150 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~---------~~~~vA~~lgiP~i~~~~~~~~~ 150 (185)
.+.+.++++. .++|+||+|...+ ...++|+.++.|++.+......+
T Consensus 120 ~I~~~~~~l~-----~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~~lg~ 174 (242)
T 3qxc_A 120 NLTQRLHNFT-----KTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGL 174 (242)
T ss_dssp HHHHHHHHGG-----GTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECCSTTH
T ss_pred HHHHHHHHHH-----hcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcCCCcH
Confidence 4445555543 3689999887422 23689999999999888765443
No 298
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=32.74 E-value=49 Score=24.52 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=24.8
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| --..++++|+++|++|.++.-
T Consensus 22 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 54 (251)
T 3orf_A 22 SKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDF 54 (251)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777776642 347899999999999988753
No 299
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=32.73 E-value=56 Score=24.48 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=25.8
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.|.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888887643 3468899999999999887543
No 300
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=32.71 E-value=67 Score=23.21 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=33.9
Q ss_pred CCceEEEEcCC-CCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYP-SQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p-~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+|.++.++ +.|=..-++.+++.+..+|.+|-++.+.
T Consensus 6 ~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 6 DHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 34678888888 8899999999999999999999998643
No 301
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=32.69 E-value=59 Score=24.38 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=25.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.+.++++..+.| -=..++++|+++|++|.++.
T Consensus 12 ~gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 12 TGKVAFITGAARG---QGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEe
Confidence 4578888887743 34689999999999998874
No 302
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=32.69 E-value=15 Score=26.87 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=23.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
|||+++-+ |. --..+++.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~--~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ET--TAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HH--HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CH--HHHHHHHHHHhCCCeEEEEECCH
Confidence 35555543 32 24578999999999999987543
No 303
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=32.66 E-value=70 Score=24.12 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=25.1
Q ss_pred eEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 10 HVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 10 ~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+++++.+. |-+ =..++++|+++|++|.++.-.
T Consensus 22 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSI--AYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeCC
Confidence 5678887652 333 367999999999999887543
No 304
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=32.63 E-value=55 Score=25.15 Aligned_cols=34 Identities=12% Similarity=0.183 Sum_probs=26.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 41 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 41 ARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 477888887753 3468899999999999887543
No 305
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=32.60 E-value=90 Score=22.43 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=23.9
Q ss_pred eEEEEcCCCCCC--hHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGH--ITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH--~~P~l~La~~La~rGh~Vt~it 43 (185)
.|+++. +..|+ ..-+..+++.|+++|++|..+-
T Consensus 29 ~vvl~H-G~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 29 LCIIIH-GFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEEC-CTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEc-CCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 345554 45566 6677889999999999987653
No 306
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=32.57 E-value=86 Score=23.77 Aligned_cols=35 Identities=14% Similarity=-0.002 Sum_probs=26.7
Q ss_pred CCceEEEeCCccc----------hHHHHHHHhCCCcEEEcccchH
Q 029948 115 PQVTCVVSDGIMG----------FGAKAARILGIPDVQLWTASAC 149 (185)
Q Consensus 115 ~~~D~vI~D~~~~----------~~~~vA~~lgiP~i~~~~~~~~ 149 (185)
.++|++|+|...+ ...++|+.++.|++.+......
T Consensus 125 ~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~g 169 (251)
T 3fgn_A 125 RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLG 169 (251)
T ss_dssp CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSSTT
T ss_pred hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCCc
Confidence 4789999887421 2468999999999988877643
No 307
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=32.56 E-value=56 Score=24.60 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.|.+++++.+.| -=..++++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888887743 346899999999999988654
No 308
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=32.50 E-value=71 Score=23.77 Aligned_cols=32 Identities=13% Similarity=0.255 Sum_probs=23.8
Q ss_pred eEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEE
Q 029948 10 HVIVLPYPSQG----HITPMMQLAKLLHSKGFHVTF 41 (185)
Q Consensus 10 ~il~~~~p~~G----H~~P~l~La~~La~rGh~Vt~ 41 (185)
+|.++.+...+ +..-..+|++.|+++|+.|..
T Consensus 11 ~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~ 46 (216)
T 1ydh_A 11 KICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVY 46 (216)
T ss_dssp EEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEE
Confidence 58888665543 346788999999999987643
No 309
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=32.50 E-value=56 Score=24.34 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=29.5
Q ss_pred CCceEEEEcC--CCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPY--PSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~--p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+++++.+.. +|.|=-.-...||..|+ +|.+|.++=.+
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 3456665543 67788899999999999 99999998544
No 310
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=32.32 E-value=49 Score=26.44 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=32.3
Q ss_pred ceEEEEcC-CCCCChHHHHHHHHHHH--hCCCeEEEEcCCc
Q 029948 9 QHVIVLPY-PSQGHITPMMQLAKLLH--SKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~-p~~GH~~P~l~La~~La--~rGh~Vt~it~~~ 46 (185)
.+|+|+.. +|.|=-+-...||..|+ ++|++|-++..+.
T Consensus 18 ~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 18 HKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 45666654 78899999999999999 9999999998765
No 311
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=32.31 E-value=30 Score=24.80 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCeEEEEcCC
Q 029948 26 MQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 26 l~La~~La~rGh~Vt~it~~ 45 (185)
..++++|+++||+|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEec
Confidence 67899999999999998644
No 312
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=32.31 E-value=37 Score=26.70 Aligned_cols=47 Identities=11% Similarity=-0.154 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchH--HHHHHHhCCCcEEEcccchHHHH
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFG--AKAARILGIPDVQLWTASACGFL 152 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~--~~vA~~lgiP~i~~~~~~~~~~~ 152 (185)
.++.+++.. .+++-+|.|+|++.+ ..+|.++|..++.+-....+...
T Consensus 241 l~~~~i~~~------~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~ 289 (323)
T 1boo_A 241 LPEFFIRML------TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAA 289 (323)
T ss_dssp HHHHHHHHH------CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred HHHHHHHHh------CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHH
Confidence 445555443 245678999999775 56889999999998777665433
No 313
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=32.20 E-value=75 Score=22.70 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=21.1
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
.+||+||.|...+. +.++.+++ ++|++.+...
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 36899999987643 45544433 5788876643
No 314
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=32.16 E-value=38 Score=25.53 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCCeEEEEcCC
Q 029948 25 MMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 25 ~l~La~~La~rGh~Vt~it~~ 45 (185)
-..+|++|+++|++|+++..+
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 467899999999999998543
No 315
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=32.05 E-value=72 Score=24.37 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=23.8
Q ss_pred CceEEEeCCcc------chHHHHHHHhCCCcEEEccc
Q 029948 116 QVTCVVSDGIM------GFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~------~~~~~vA~~lgiP~i~~~~~ 146 (185)
+||+|+..... ..+..+|.+||+|.++..+.
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 58999975544 24688999999999987643
No 316
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=32.02 E-value=77 Score=23.11 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=25.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.+++++.+. - -=..++++|+++|++|.++.-
T Consensus 13 ~~k~vlITGas~-g--IG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 13 KGRVILVTGAAR-G--IGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp TTCEEEESSTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCC-h--HHHHHHHHHHHCCCEEEEEec
Confidence 457788888763 2 346889999999999987754
No 317
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=31.98 E-value=58 Score=24.16 Aligned_cols=33 Identities=24% Similarity=0.166 Sum_probs=24.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 5 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 5 GQVCVVTGASRG---IGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788876643 346889999999999988653
No 318
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=31.88 E-value=55 Score=24.88 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=27.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+-|+++++..+.| -=..+|++|+++|.+|.++.-
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4588999998875 457899999999999987643
No 319
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=31.81 E-value=42 Score=25.73 Aligned_cols=32 Identities=13% Similarity=0.257 Sum_probs=25.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|.|+-.+..|. .+++.|+++||+|+++...
T Consensus 4 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 5888887766663 6789999999999998543
No 320
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=31.81 E-value=67 Score=23.70 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=23.4
Q ss_pred CceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
..-+||++.--..+...|+++|||+..+.+..
T Consensus 32 ~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~ 63 (212)
T 3av3_A 32 RVALLVCDRPGAKVIERAARENVPAFVFSPKD 63 (212)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCCEEECCGGG
T ss_pred eEEEEEeCCCCcHHHHHHHHcCCCEEEeCccc
Confidence 34568887544456788999999998776644
No 321
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=31.80 E-value=54 Score=24.82 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=25.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 5 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 37 (281)
T 3zv4_A 5 GEVALITGGASG---LGRALVDRFVAEGARVAVLDK 37 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 467888877753 346899999999999988753
No 322
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=31.78 E-value=32 Score=22.91 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=23.8
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.|++++-. |.+ -..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 46777644 443 467899999999999998654
No 323
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=31.71 E-value=59 Score=24.53 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 25 ~gk~~lVTGas~g---IG~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 25 GGRTALVTGSSRG---LGRAMAEGLAVAGARILINGT 58 (271)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887753 346899999999999887643
No 324
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=31.67 E-value=46 Score=25.22 Aligned_cols=37 Identities=5% Similarity=0.153 Sum_probs=27.2
Q ss_pred ceEEEEcCCCCCC---hHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGH---ITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH---~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|+++..+.... ......+++++.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 4888888774221 234467999999999999998654
No 325
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=31.64 E-value=70 Score=23.81 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=26.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.+.+++++.+.| -=..++++|+++|++|.++....
T Consensus 26 ~k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~r~ 60 (267)
T 4iiu_A 26 SRSVLVTGASKG---IGRAIARQLAADGFNIGVHYHRD 60 (267)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 467788877643 34689999999999998866443
No 326
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=31.61 E-value=99 Score=23.29 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=24.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+++++.+ |- -=..++++|+++|++|.++.-.
T Consensus 26 ~k~vlITGas-gg--iG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 26 GKVAFITGGG-TG--LGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 3566777655 32 3468899999999999887543
No 327
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=31.58 E-value=55 Score=24.82 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 16 gk~vlVTGas~g---IG~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 16 QRTVVITGANSG---LGAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp TCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 467788877642 3478999999999999887543
No 328
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=31.54 E-value=36 Score=27.01 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 22 ITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 22 ~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+-++.+|.+.|.++|++|.++|...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 5789999999999999999998553
No 329
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=31.47 E-value=49 Score=24.36 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=22.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEE
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~i 42 (185)
+.++++..+.| + =..++++|+++|++|.++
T Consensus 2 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 2 VIALVTHARHF-A--GPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp CEEEESSTTST-T--HHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEe
Confidence 45677766543 2 367899999999999887
No 330
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=31.42 E-value=67 Score=20.71 Aligned_cols=11 Identities=0% Similarity=0.157 Sum_probs=6.6
Q ss_pred CceEEEeCCcc
Q 029948 116 QVTCVVSDGIM 126 (185)
Q Consensus 116 ~~D~vI~D~~~ 126 (185)
+||+||.|...
T Consensus 50 ~~dlvi~D~~l 60 (136)
T 3kto_A 50 DAIGMIIEAHL 60 (136)
T ss_dssp TEEEEEEETTG
T ss_pred CCCEEEEeCcC
Confidence 46666666554
No 331
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=31.41 E-value=33 Score=24.63 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=22.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|+++- +.|.+- ..+++.|+++||+|+++...
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3666663 133332 46789999999999987543
No 332
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=31.36 E-value=58 Score=21.49 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=19.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
+||+||.|..++. +.++.+++ ++|++.+....
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 5788888876643 44444332 45666665543
No 333
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=31.35 E-value=76 Score=26.45 Aligned_cols=40 Identities=18% Similarity=0.374 Sum_probs=33.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCcc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEFN 47 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~~ 47 (185)
...|+++-.+|.|=..-...||..|+++|++|.++..+.+
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~ 139 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTW 139 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 3455666668889999999999999999999999987654
No 334
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=31.30 E-value=22 Score=27.29 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=25.8
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhC-----C-CeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSK-----G-FHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~r-----G-h~Vt~it~ 44 (185)
.+++|+|+-.+..| ..+++.|++. | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 45789998666656 3568889988 9 99999865
No 335
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=31.29 E-value=75 Score=23.14 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=24.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 6 ~k~vlVtGasgg---iG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 6 GKVAIITGGTLG---IGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356677766532 3468999999999999887543
No 336
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=31.27 E-value=58 Score=23.96 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=25.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 8 ~~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 8 ENKVGIVTGSGGG---IGQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcC
Confidence 3467788876642 346899999999999988754
No 337
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=31.23 E-value=95 Score=23.85 Aligned_cols=39 Identities=15% Similarity=0.053 Sum_probs=29.3
Q ss_pred CCceEEEEcCCCCC-C---hHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 7 TKQHVIVLPYPSQG-H---ITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~G-H---~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++||+++..+..+ | +..-..++++|.++||+|..+.+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35688887765432 2 457789999999999999998744
No 338
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=31.22 E-value=69 Score=24.48 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=29.5
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.|++..-+|.|=-.-...||..|+++|.+|-++=.+
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 455665577788899999999999999999998543
No 339
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=31.21 E-value=65 Score=20.07 Aligned_cols=28 Identities=18% Similarity=0.050 Sum_probs=18.5
Q ss_pred CceEEEeCCccc---hHHHHHHH-------hCCCcEEE
Q 029948 116 QVTCVVSDGIMG---FGAKAARI-------LGIPDVQL 143 (185)
Q Consensus 116 ~~D~vI~D~~~~---~~~~vA~~-------lgiP~i~~ 143 (185)
+||+||.|...+ .+..+.++ .++|++.+
T Consensus 49 ~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~ 86 (127)
T 2gkg_A 49 RPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII 86 (127)
T ss_dssp CCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE
Confidence 689999998665 24444432 35788877
No 340
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=31.19 E-value=48 Score=24.18 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=30.0
Q ss_pred ceEEEEc--CCCCCChHHHHHHHHHHHhC-CCeEEEEcCCc
Q 029948 9 QHVIVLP--YPSQGHITPMMQLAKLLHSK-GFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~--~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~ 46 (185)
+++..+. -+|.|=-.-...||..|+++ |.+|.++=.+.
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 4544333 37889999999999999999 99999986543
No 341
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=31.17 E-value=54 Score=24.84 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=25.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
|.+++|..+.| -=..++++|+++|.+|.+..-.
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56778887765 4578999999999999887543
No 342
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=31.17 E-value=44 Score=23.89 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=22.2
Q ss_pred CceEEEeCCccch--HHHHHHH---------hCCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARI---------LGIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~---------lgiP~i~~~~~~ 147 (185)
+||+||.|..++. +.++.++ .++|+|.+....
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 6999999987754 4554433 357888877654
No 343
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=31.13 E-value=57 Score=21.53 Aligned_cols=32 Identities=16% Similarity=-0.002 Sum_probs=20.2
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 61 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 61 LPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 6899999986643 44444433 46777665544
No 344
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=31.12 E-value=52 Score=25.29 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=19.7
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 12 IVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 12 l~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+++++.+ |-+- ..|+++|.++||+|+.+.
T Consensus 12 vlVTGat-GfIG--~~l~~~Ll~~G~~V~~~~ 40 (338)
T 2rh8_A 12 ACVVGGT-GFVA--SLLVKLLLQKGYAVNTTV 40 (338)
T ss_dssp EEEECTT-SHHH--HHHHHHHHHTTCEEEEEE
T ss_pred EEEECCc-hHHH--HHHHHHHHHCCCEEEEEE
Confidence 4444433 4332 468899999999998754
No 345
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=31.10 E-value=40 Score=26.62 Aligned_cols=42 Identities=24% Similarity=0.140 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchH--HHHHHHhCCCcEEEcccc
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFG--AKAARILGIPDVQLWTAS 147 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~--~~vA~~lgiP~i~~~~~~ 147 (185)
.++.+++.. .+++-+|.|+|++.+ ..+|.++|..+|.+-...
T Consensus 231 l~~~~i~~~------~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~ 274 (319)
T 1eg2_A 231 VIERLVRAL------SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAP 274 (319)
T ss_dssp HHHHHHHHH------SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESST
T ss_pred HHHHHHHHh------CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCc
Confidence 335555543 245678999999775 568899999999988877
No 346
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.07 E-value=57 Score=21.58 Aligned_cols=33 Identities=21% Similarity=0.116 Sum_probs=20.0
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 36899998876542 44444332 57777766544
No 347
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.05 E-value=58 Score=24.00 Aligned_cols=32 Identities=9% Similarity=0.178 Sum_probs=23.8
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 6 k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAAHG---IGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56677766542 346789999999999988753
No 348
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=31.01 E-value=47 Score=24.77 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=26.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 11 ~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 44 (256)
T 3gaf_A 11 NDAVAIVTGAAAG---IGRAIAGTFAKAGASVVVTDL 44 (256)
T ss_dssp TTCEEEECSCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4578888887753 346899999999999988754
No 349
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=30.99 E-value=68 Score=24.13 Aligned_cols=35 Identities=20% Similarity=0.157 Sum_probs=26.7
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 12 ~~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 46 (269)
T 3vtz_A 12 FTDKVAIVTGGSSG---IGLAVVDALVRYGAKVVSVSL 46 (269)
T ss_dssp TTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 34677888887753 346899999999999988753
No 350
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=30.97 E-value=77 Score=19.24 Aligned_cols=32 Identities=9% Similarity=-0.208 Sum_probs=20.3
Q ss_pred CceEEEeCCccch--HHHHHHH-------hCCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARI-------LGIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~-------lgiP~i~~~~~~ 147 (185)
+||+||.|...+. +..+.++ -++|++.+....
T Consensus 45 ~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 45 QPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp CCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 6899999976532 3433332 357888776644
No 351
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.95 E-value=62 Score=24.15 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=25.9
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 9 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 9 QGRSVVVTGGTKG---IGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467888887743 346789999999999988753
No 352
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=30.86 E-value=61 Score=24.09 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=28.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 11 VIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 11 il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
|.+..-+|.|=-.-...||..|+++|++|.++=.
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcC
Confidence 4555567889999999999999999999999843
No 353
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=30.86 E-value=36 Score=25.93 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=26.9
Q ss_pred ceEEEEcCCCC--CChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQ--GHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~--GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+|++++.+|- |+= +.+||.|.++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEc
Confidence 48999998874 332 6899999999999999854
No 354
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=30.83 E-value=61 Score=24.82 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=22.4
Q ss_pred CCceEEEeCCccc-h--HHH----HHHHhCCCcEEEccc
Q 029948 115 PQVTCVVSDGIMG-F--GAK----AARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~-~--~~~----vA~~lgiP~i~~~~~ 146 (185)
.+||+||.|..++ . +.. +-+..++|+|.++..
T Consensus 204 ~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 204 RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 4799999999887 3 333 333337998887775
No 355
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=30.69 E-value=35 Score=26.54 Aligned_cols=33 Identities=27% Similarity=0.240 Sum_probs=25.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 3789988655544 57899999999999998543
No 356
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=30.65 E-value=63 Score=24.44 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=26.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 32 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 65 (275)
T 4imr_A 32 RGRTALVTGSSRG---IGAAIAEGLAGAGAHVILHGV 65 (275)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEcC
Confidence 3478888887753 346899999999999988753
No 357
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=30.65 E-value=74 Score=23.50 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=24.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 6 ~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r 38 (253)
T 1hxh_A 6 GKVALVTGGASG---VGLEVVKLLLGEGAKVAFSDI 38 (253)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777776642 456899999999999988753
No 358
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=30.58 E-value=64 Score=24.20 Aligned_cols=33 Identities=15% Similarity=-0.044 Sum_probs=24.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+. - -=..++++|+++|++|.++.-
T Consensus 5 ~k~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 37 (281)
T 3m1a_A 5 AKVWLVTGASS-G--FGRAIAEAAVAAGDTVIGTAR 37 (281)
T ss_dssp CCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEeC
Confidence 46777877663 2 345789999999999987754
No 359
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=30.57 E-value=58 Score=24.74 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=26.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+++++++.+.| -=..++++|+++|++|.++.-.
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467888887753 3478999999999999887543
No 360
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=30.50 E-value=59 Score=24.46 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=25.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 6 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 38 (274)
T 3e03_A 6 GKTLFITGASRG---IGLAIALRAARDGANVAIAAK 38 (274)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEec
Confidence 467888887743 346889999999999988753
No 361
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=30.48 E-value=56 Score=24.69 Aligned_cols=32 Identities=9% Similarity=0.230 Sum_probs=24.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+++++.+.| + =..++++|+++|++|.++.-
T Consensus 22 k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITGATSG-F--GEACARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 56788876644 2 36799999999999988754
No 362
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=30.46 E-value=60 Score=24.61 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=26.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++++..+.| -=..++++|+++|++|.++..
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 3477888887753 446899999999999988763
No 363
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=30.39 E-value=61 Score=23.43 Aligned_cols=36 Identities=17% Similarity=0.080 Sum_probs=25.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.-|+++.+. .++..-+..+++.|+++|++|..+--.
T Consensus 43 ~~vv~~hG~-~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 43 ALIFVSHGA-GEHSGRYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp EEEEEECCT-TCCGGGGHHHHHHHHHTTEEEEEECCT
T ss_pred eEEEEECCC-CchhhHHHHHHHHHHhCCCcEEEeCCC
Confidence 345555554 466667788999999999998877543
No 364
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=30.34 E-value=73 Score=23.55 Aligned_cols=48 Identities=21% Similarity=0.253 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
.++++++.+.+..-....-+||++.--..+...|+++|||++.+.+..
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~ 60 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASA 60 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCccc
Confidence 356666665432100135678888655567889999999999876543
No 365
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=30.34 E-value=61 Score=23.87 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=25.7
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+.+.++++..+.| -=..++++|+++|++|.++.
T Consensus 11 ~~~k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 11 MSQRIAYVTGGMGG---IGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp --CEEEEETTTTSH---HHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEe
Confidence 45678888887753 34689999999999998875
No 366
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.33 E-value=64 Score=24.34 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-.
T Consensus 29 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 62 (283)
T 1g0o_A 29 GKVALVTGAGRG---IGREMAMELGRRGCKVIVNYAN 62 (283)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367788877643 3478999999999999887543
No 367
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=30.27 E-value=71 Score=23.57 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 6 gk~vlVTGas~g---IG~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 6 GKTALVTGAAQG---IGKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788877643 346899999999999988653
No 368
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=30.23 E-value=37 Score=22.36 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=12.4
Q ss_pred HHHHHHHHhCCCeEEEEc
Q 029948 26 MQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 26 l~La~~La~rGh~Vt~it 43 (185)
.+...+.++.|.+|.+++
T Consensus 69 ~~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 69 VRQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCCeEEEEe
Confidence 344445557799999888
No 369
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=30.21 E-value=54 Score=24.93 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=25.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.+.+++++.+.| -=..++++|+++|++|.++.
T Consensus 7 ~gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 7 EGKIAIVTGASSG---IGRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEE
Confidence 3467888887753 34678999999999987764
No 370
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=30.17 E-value=65 Score=24.07 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 28 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 28 QKVVVITGASQG---IGAGLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788876642 336899999999999988753
No 371
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=30.13 E-value=70 Score=24.35 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=23.4
Q ss_pred CceEEEeCCcc------chHHHHHHHhCCCcEEEcc
Q 029948 116 QVTCVVSDGIM------GFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 116 ~~D~vI~D~~~------~~~~~vA~~lgiP~i~~~~ 145 (185)
+||+|+..... ..+..+|.+||+|.++..+
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 58999975543 2468899999999998764
No 372
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=30.02 E-value=28 Score=26.84 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=25.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+|.++-.+..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4788887766665 5889999999999988644
No 373
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=29.95 E-value=65 Score=24.30 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=24.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| --..++++|+++|++|.++.-
T Consensus 28 ~k~vlITGasgg---IG~~la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 28 GKKVIVTGASKG---IGREMAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 356777776532 446889999999999988753
No 374
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=29.95 E-value=1.1e+02 Score=21.12 Aligned_cols=36 Identities=22% Similarity=0.118 Sum_probs=24.5
Q ss_pred CceEEEEcCC----CCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYP----SQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p----~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.-|+++... +...-..+..+++.|+++|+.|..+-
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 76 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFN 76 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEEC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEe
Confidence 4455666642 33344557899999999999887764
No 375
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=29.94 E-value=64 Score=23.63 Aligned_cols=32 Identities=25% Similarity=0.184 Sum_probs=21.9
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|..++. +..+.+++ ++|++.++...
T Consensus 67 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 67 RPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 6999999987654 55555443 47887776644
No 376
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=29.92 E-value=62 Score=24.42 Aligned_cols=35 Identities=20% Similarity=0.151 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.|.++++..+.| -=..++++|+++|++|.++...
T Consensus 30 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 30 AGKTAFVTGGSRG---IGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467888887753 3468999999999999887443
No 377
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=29.86 E-value=75 Score=24.63 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| --..++++|+++|++|.++.-
T Consensus 8 ~k~vlVTGas~g---IG~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 8 GRTAFVTGGANG---VGIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp TCEEEEETTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEcCCchH---HHHHHHHHHHHCCCEEEEEEC
Confidence 357778877644 346899999999999887653
No 378
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=29.74 E-value=62 Score=24.22 Aligned_cols=34 Identities=6% Similarity=0.014 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.+++++.+.| --..++++|+++|++|.++.-.
T Consensus 31 ~k~vlITGasgg---IG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 31 GEIVLITGAGHG---IGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEEcC
Confidence 356677766542 4468999999999999887643
No 379
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=29.72 E-value=79 Score=23.36 Aligned_cols=31 Identities=13% Similarity=-0.108 Sum_probs=20.8
Q ss_pred CceEEEeCCccc-hHHHHHHHhCCCcEEEccc
Q 029948 116 QVTCVVSDGIMG-FGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~~-~~~~vA~~lgiP~i~~~~~ 146 (185)
+||+||...... .....-++.|||++.+...
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 799999754332 2344557789999887543
No 380
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=29.72 E-value=1e+02 Score=22.66 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=25.3
Q ss_pred CCceEEEEcCCCC---CChHHHHHHHHHHHhCCCeEEE
Q 029948 7 TKQHVIVLPYPSQ---GHITPMMQLAKLLHSKGFHVTF 41 (185)
Q Consensus 7 ~~~~il~~~~p~~---GH~~P~l~La~~La~rGh~Vt~ 41 (185)
...+|.++.+... -+..-..+|++.|+++|+.|..
T Consensus 21 ~~~~v~Vfggs~~~~~~~~~~A~~lg~~La~~g~~lV~ 58 (199)
T 3qua_A 21 RQWAVCVYCASGPTHPELLELAAEVGSSIAARGWTLVS 58 (199)
T ss_dssp CCCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3468999875541 2246678999999999987644
No 381
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=29.69 E-value=45 Score=25.36 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=23.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
++|.|+-.+..|. .+++.|+++||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4678886666664 578899999999998754
No 382
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=29.68 E-value=83 Score=23.09 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=24.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+++++.+.| --..++++|+++|++|.++.-.
T Consensus 8 k~vlITGasgg---iG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAGSG---IGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56677766532 3468899999999999887543
No 383
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=29.57 E-value=77 Score=23.85 Aligned_cols=35 Identities=14% Similarity=0.311 Sum_probs=26.7
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 26 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 26 RDKVAFITGGGSG---IGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888887743 4568899999999999887543
No 384
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=29.56 E-value=65 Score=24.37 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=27.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|++++|..+.| -=..++++|+++|.+|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~ 43 (242)
T 4b79_A 10 AGQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGL 43 (242)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3588999998875 457899999999999988643
No 385
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=29.53 E-value=56 Score=26.01 Aligned_cols=32 Identities=28% Similarity=0.202 Sum_probs=20.8
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
.+||+||.|..++. +..+++++ ++|+|.++..
T Consensus 48 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~pii~lt~~ 86 (394)
T 3eq2_A 48 EQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGA 86 (394)
T ss_dssp SCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhCCCCcEEEEEcC
Confidence 36999999987765 46666554 4787766654
No 386
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=29.51 E-value=36 Score=26.66 Aligned_cols=32 Identities=6% Similarity=0.116 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKG-FHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rG-h~Vt~it~~ 45 (185)
++|.|+-.+..| ..+++.|+++| |+|+++...
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 578888766655 67899999999 999988543
No 387
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=29.51 E-value=66 Score=24.42 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=24.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+++|+|+-.+..|. .+++.|++.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57899997666664 468889999999988753
No 388
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=29.50 E-value=71 Score=23.46 Aligned_cols=34 Identities=12% Similarity=0.039 Sum_probs=24.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHS-KGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~-rGh~Vt~it~~ 45 (185)
.+.+++++.+ |- --..+++.|++ +|++|.++.-.
T Consensus 4 ~k~vlITGas-gg--IG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-KG--IGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-SH--HHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-cH--HHHHHHHHHHHhcCCeEEEEeCC
Confidence 4566777655 32 34678999999 99999887643
No 389
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.49 E-value=65 Score=24.94 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.++++++..+.| -=..++++|+++|++|.++.
T Consensus 46 gk~~lVTGas~G---IG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 46 GKVAFITGAARG---QGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCeEEEEe
Confidence 478888887753 34689999999999998874
No 390
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=29.34 E-value=47 Score=25.05 Aligned_cols=45 Identities=20% Similarity=0.110 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchH--HHHHHHhCCCcEEEcccchHH
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFG--AKAARILGIPDVQLWTASACG 150 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~--~~vA~~lgiP~i~~~~~~~~~ 150 (185)
.++.+++.. .+.+-+|.|+|++.+ ..+|.++|..++.+-....+.
T Consensus 201 l~~~~i~~~------~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~ 247 (260)
T 1g60_A 201 LIERIIRAS------SNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYV 247 (260)
T ss_dssp HHHHHHHHH------CCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHH
T ss_pred HHHHHHHHh------CCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHH
Confidence 345555543 245568999999775 567889999999887666443
No 391
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=29.32 E-value=48 Score=21.32 Aligned_cols=32 Identities=13% Similarity=-0.002 Sum_probs=19.4
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (137)
T 3hdg_A 51 APDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFS 89 (137)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCc
Confidence 6899999987643 44444433 35655554443
No 392
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=29.25 E-value=63 Score=24.67 Aligned_cols=35 Identities=14% Similarity=0.021 Sum_probs=26.7
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.|.++++..+.| -=..++++|+++|++|.+....
T Consensus 48 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 48 KDRKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888887753 3478999999999999886543
No 393
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=29.24 E-value=81 Score=23.87 Aligned_cols=33 Identities=15% Similarity=0.082 Sum_probs=24.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+. - --..++++|+++|++|.++.-
T Consensus 18 ~k~vlVTGasg-g--IG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 18 GQVAIVTGGAT-G--IGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp TCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 35677776653 2 346889999999999988754
No 394
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=29.23 E-value=69 Score=20.64 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=20.7
Q ss_pred CceEEEeCCccch--HHHHHHHh------CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL------GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l------giP~i~~~~~~ 147 (185)
+||+||.|..++. +..+.+++ .+|++.++...
T Consensus 52 ~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~ 91 (133)
T 2r25_B 52 NYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFA 91 (133)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCC
Confidence 6899999987753 45544432 36777665544
No 395
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=29.22 E-value=37 Score=23.78 Aligned_cols=33 Identities=12% Similarity=0.289 Sum_probs=22.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|++. ++.|- --..++++|.++||+|+.+.-.
T Consensus 4 ~~ilVt--GatG~--iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQ--TGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcH--HHHHHHHHHHHCCCeEEEEEeC
Confidence 455544 23343 3467899999999999988643
No 396
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=29.14 E-value=38 Score=25.96 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=26.9
Q ss_pred ceEEEEcCCCC--CChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQ--GHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~--GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+|++++++|- |+= +.+||.|.++|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEe
Confidence 48999998774 332 6899999999999999854
No 397
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=29.11 E-value=46 Score=21.58 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=18.1
Q ss_pred CceEEEeCCccch--HHHHHHH-------hCCCcEEEccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARI-------LGIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~-------lgiP~i~~~~~ 146 (185)
+||+||.|...+. +..+.++ -++|++.+...
T Consensus 46 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 46 HPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp CCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 6899999986643 3333332 35777766654
No 398
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=29.10 E-value=33 Score=26.75 Aligned_cols=17 Identities=12% Similarity=0.219 Sum_probs=15.5
Q ss_pred HHHHHHHHhCCCeEEEE
Q 029948 26 MQLAKLLHSKGFHVTFV 42 (185)
Q Consensus 26 l~La~~La~rGh~Vt~i 42 (185)
+.+|..|+++|++|+++
T Consensus 17 l~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMI 33 (397)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCcEEEE
Confidence 56889999999999998
No 399
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=29.02 E-value=92 Score=22.98 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=26.2
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++.+++++.+.| -=..++++|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKG---LGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCch---hHHHHHHHHHHCCCEEEEEcCC
Confidence 3577888877642 2468999999999999987543
No 400
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.01 E-value=1.1e+02 Score=20.06 Aligned_cols=34 Identities=6% Similarity=-0.078 Sum_probs=24.6
Q ss_pred EEcCCCCCCh--HHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 13 VLPYPSQGHI--TPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 13 ~~~~p~~GH~--~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++..+-.|+- .-.+.++..+.+.||+|.++-...
T Consensus 7 vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 7 VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 4444445665 667789999999999998885543
No 401
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=28.98 E-value=44 Score=24.95 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=24.3
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 11 VIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 11 il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
|+++- +..|+-.-+..+++.|+++|++|..+-
T Consensus 54 VlllH-G~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSH-GFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EEEEC-CTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EEEEC-CCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 55554 455676678889999999999987764
No 402
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=28.94 E-value=92 Score=23.09 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=24.4
Q ss_pred eEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+. |-+ =..++++|+++|++|.++.-
T Consensus 10 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r 43 (265)
T 1qsg_A 10 KRILVTGVASKLSI--AYGIAQAMHREGAELAFTYQ 43 (265)
T ss_dssp CEEEECCCCSTTSH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHCCCEEEEEcC
Confidence 5677777652 333 36799999999999988753
No 403
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=28.93 E-value=67 Score=23.92 Aligned_cols=32 Identities=13% Similarity=0.218 Sum_probs=24.5
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+.++++..+.| -=..++++|+++|++|.++.
T Consensus 21 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~ 52 (253)
T 2nm0_A 21 SRSVLVTGGNRG---IGLAIARAFADAGDKVAITY 52 (253)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEe
Confidence 466777776643 34678999999999998875
No 404
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=28.84 E-value=87 Score=22.83 Aligned_cols=34 Identities=29% Similarity=0.288 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.++++..+.| -=..++++|+++|++|.++.-.
T Consensus 5 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 5 EKVALVTGASRG---IGFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777776642 2468999999999999877543
No 405
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=28.77 E-value=47 Score=24.64 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=25.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.++++++..+.| -=..++++|+++|++|.++.-
T Consensus 9 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASG---LGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888877643 346899999999999988754
No 406
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=28.74 E-value=68 Score=24.09 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=23.7
Q ss_pred CceEEEeCCccchHHHHHHHhCCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGFGAKAARILGIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~~ 147 (185)
...+||++.--..+...|+++|||++.+.+..
T Consensus 51 ~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~ 82 (229)
T 3auf_A 51 RVAVVISDRADAYGLERARRAGVDALHMDPAA 82 (229)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCEEEECCGGG
T ss_pred eEEEEEcCCCchHHHHHHHHcCCCEEEECccc
Confidence 35578888544456789999999998776644
No 407
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=28.59 E-value=58 Score=27.42 Aligned_cols=24 Identities=17% Similarity=0.009 Sum_probs=20.0
Q ss_pred CceEEEeCCccchHHHHHHHhCCCcEE
Q 029948 116 QVTCVVSDGIMGFGAKAARILGIPDVQ 142 (185)
Q Consensus 116 ~~D~vI~D~~~~~~~~vA~~lgiP~i~ 142 (185)
+||++|... ....+|+++|||++-
T Consensus 417 ~pDL~ig~~---~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 417 KPDLIGSGI---KEKFIFQKMGIPFRE 440 (492)
T ss_dssp CCSEEEECH---HHHHHHHHTTCCEEE
T ss_pred CCcEEEeCc---chhHHHHHcCCCEEe
Confidence 689999853 457899999999986
No 408
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=28.55 E-value=84 Score=23.53 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=24.1
Q ss_pred eEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+. |-+ =..++++|+++|++|.++.-
T Consensus 7 k~vlVTGas~~~gI--G~~~a~~l~~~G~~V~~~~r 40 (275)
T 2pd4_A 7 KKGLIVGVANNKSI--AYGIAQSCFNQGATLAFTYL 40 (275)
T ss_dssp CEEEEECCCSTTSH--HHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEeC
Confidence 5677777651 333 36899999999999988753
No 409
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=28.54 E-value=37 Score=25.52 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=18.8
Q ss_pred CCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 17 PSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 17 p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
++.|-+ -..|+++|.++||+|+.+.
T Consensus 19 GatG~i--G~~l~~~L~~~g~~V~~~~ 43 (292)
T 1vl0_A 19 GANGQL--GREIQKQLKGKNVEVIPTD 43 (292)
T ss_dssp STTSHH--HHHHHHHHTTSSEEEEEEC
T ss_pred CCCChH--HHHHHHHHHhCCCeEEecc
Confidence 334544 3578899999999999875
No 410
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=28.48 E-value=1.2e+02 Score=22.77 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=24.3
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+. .-=..++++|+++|++|.++.-
T Consensus 23 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGATS---GIGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 6777777664 2346889999999999988754
No 411
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=28.47 E-value=32 Score=26.99 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=26.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+||+++-.+..| ..++..|++.||+|+++.-.
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 4688888666555 45789999999999999754
No 412
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=28.45 E-value=67 Score=24.36 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=25.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.|.++++..+.| -=..++++|+++|++|.++.-
T Consensus 32 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 65 (281)
T 4dry_A 32 EGRIALVTGGGTG---VGRGIAQALSAEGYSVVITGR 65 (281)
T ss_dssp --CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3578888887742 346899999999999988754
No 413
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=28.39 E-value=64 Score=23.85 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=23.3
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 3 KVALVTGAGQG---IGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666665532 346899999999999988754
No 414
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=28.31 E-value=92 Score=23.79 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=22.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
|+|++. ++.|-+ -..|+++|.++||+|+.+.-
T Consensus 14 M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHR 45 (342)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEec
Confidence 565554 333433 35788999999999998864
No 415
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=28.21 E-value=87 Score=23.87 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.++++++..+.| -=..++++|+++|++|.++.
T Consensus 27 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 27 EGKVAFITGAARG---QGRSHAITLAREGADIIAID 59 (299)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEe
Confidence 3578888887753 45789999999999998874
No 416
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=28.20 E-value=75 Score=24.53 Aligned_cols=43 Identities=12% Similarity=0.068 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccch--HHHHHHHhCCCcEEEcc
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGF--GAKAARILGIPDVQLWT 145 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~--~~~vA~~lgiP~i~~~~ 145 (185)
..++++.+.+++ .+..||+++...+- +..+|++.|++++.+.+
T Consensus 215 ~~l~~l~~~ik~----~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 215 RQLKEIQDFVKE----YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHHH----cCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 356666666655 46789999887754 35689999999887654
No 417
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=28.19 E-value=51 Score=27.28 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=25.9
Q ss_pred eEEEEcCCC---CCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLPYPS---QGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~~p~---~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
-.++=|++. -||+.|+..+ +.|++.||++.++..+.
T Consensus 34 y~G~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd~ 72 (419)
T 2ts1_A 34 YCGFDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGGA 72 (419)
T ss_dssp EEEECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred EEeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 344556644 3999986655 68999999998886543
No 418
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=28.08 E-value=1.2e+02 Score=19.57 Aligned_cols=32 Identities=22% Similarity=0.104 Sum_probs=20.7
Q ss_pred CCceEEEeCCccc---hHHHHHHH----hCCCcEEEccc
Q 029948 115 PQVTCVVSDGIMG---FGAKAARI----LGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~---~~~~vA~~----lgiP~i~~~~~ 146 (185)
.+||+||.|...+ .+..+.++ -++|++.+...
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 3689999998663 24444433 46888776654
No 419
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.06 E-value=95 Score=23.29 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 6 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 6 NKTVIITGSSNG---IGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 356778876642 346789999999999988753
No 420
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=28.03 E-value=55 Score=23.61 Aligned_cols=32 Identities=19% Similarity=0.086 Sum_probs=20.9
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|..++. +.++.+++ ++|++.+....
T Consensus 47 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 85 (225)
T 3c3w_A 47 RPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYT 85 (225)
T ss_dssp CCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGSS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECCC
Confidence 6899999987653 45554433 46777665543
No 421
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=28.03 E-value=1.3e+02 Score=19.65 Aligned_cols=33 Identities=21% Similarity=0.112 Sum_probs=21.6
Q ss_pred CCceEEEeCCccch--HHHHHHH-------hCCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARI-------LGIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~-------lgiP~i~~~~~~ 147 (185)
.+||+||.|...+. +.++.++ .++|++.+....
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 99 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTD 99 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 47999999987643 4444443 246777776654
No 422
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=28.01 E-value=88 Score=23.36 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=26.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+.++++..+.| -=..++++|+++|++|.++...
T Consensus 17 ~~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 17 DGKVALVTGSGRG---IGAAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp TTCEEEESCTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3578888887742 3468999999999999886543
No 423
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=27.94 E-value=39 Score=28.06 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|.++-.+..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 688888555444 57899999999999988644
No 424
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=27.91 E-value=54 Score=23.94 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=27.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
..++++-.++.|+..-+..+++.|+++|+.|..+-..
T Consensus 49 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 85 (258)
T 2fx5_A 49 HPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETS 85 (258)
T ss_dssp EEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCS
T ss_pred ceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCC
Confidence 3455555555567778889999999999998877543
No 425
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=27.85 E-value=54 Score=21.40 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=20.8
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
+||+||.|..++. +..+.+++ ++|++.+....
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDA 105 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 6899999987654 34444433 47777766544
No 426
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=27.79 E-value=49 Score=25.57 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=27.3
Q ss_pred ceEEEEcCCCC--CChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQ--GHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~--GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+|++++.+|- |+= +.+||.|.++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeC
Confidence 48999998874 332 68999999999999998543
No 427
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.65 E-value=70 Score=24.00 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=25.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.|.++++..+.| -=..++++|+++|++|.++.
T Consensus 10 ~~k~~lVTGas~G---IG~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 10 EGRVAFITGAARG---QGRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCccH---HHHHHHHHHHHcCCEEEEEe
Confidence 3477888887753 34688999999999998874
No 428
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=27.57 E-value=83 Score=23.42 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=28.8
Q ss_pred eEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLP-YPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~-~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.|.+.. -+|.|=-.-...||..|+++|.+|.++=.+.
T Consensus 20 vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 57 (262)
T 2ph1_A 20 RIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADF 57 (262)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 344443 3677889999999999999999999985443
No 429
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=27.55 E-value=23 Score=26.85 Aligned_cols=45 Identities=22% Similarity=0.200 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCCccch---HHHH----HHHhCCCcEEEcccch
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDGIMGF---GAKA----ARILGIPDVQLWTASA 148 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~~~~~---~~~v----A~~lgiP~i~~~~~~~ 148 (185)
+.+.++++++. .+||+++.|...-. ...+ .-.+|+|.|.+.=+..
T Consensus 91 P~~l~al~~L~-----~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~~l 142 (225)
T 2w36_A 91 PLFLKAWEKLR-----TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRL 142 (225)
T ss_dssp HHHHHHHTTCC-----SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESSCS
T ss_pred HHHHHHHHhcC-----CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEeccc
Confidence 45555666553 47999999986533 2334 4455899998765554
No 430
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=27.54 E-value=69 Score=23.06 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=25.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+..|+++.+ ..|+-.-+..+++.|+++|+.|..+--
T Consensus 40 ~~~vv~~HG-~~~~~~~~~~~~~~l~~~G~~v~~~d~ 75 (270)
T 3rm3_A 40 PVGVLLVHG-FTGTPHSMRPLAEAYAKAGYTVCLPRL 75 (270)
T ss_dssp SEEEEEECC-TTCCGGGTHHHHHHHHHTTCEEEECCC
T ss_pred CeEEEEECC-CCCChhHHHHHHHHHHHCCCEEEEeCC
Confidence 344555544 556666688999999999998877643
No 431
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=27.53 E-value=64 Score=24.24 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=25.7
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 16 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 16 KKLVVITGASSG---IGEAIARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 477888887743 346889999999999988754
No 432
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=27.46 E-value=63 Score=25.46 Aligned_cols=38 Identities=24% Similarity=0.189 Sum_probs=27.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+..++++..++.|.-.-...+++.|+++|+.|..+-..
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~ 134 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHR 134 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCC
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccC
Confidence 44555555555566666788999999999988877544
No 433
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=27.37 E-value=1.2e+02 Score=22.66 Aligned_cols=32 Identities=16% Similarity=0.059 Sum_probs=21.4
Q ss_pred CCceEEEeCCccch----HHHHHHHhCCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF----GAKAARILGIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~----~~~vA~~lgiP~i~~~~~ 146 (185)
+++|.||+-..... ....+.+.|||+|.+...
T Consensus 60 ~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (297)
T 3rot_A 60 TYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTR 95 (297)
T ss_dssp TCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCC
T ss_pred cCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 36898886554322 344567789999987643
No 434
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=27.34 E-value=91 Score=19.81 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=19.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
+||+||.|...+. +..+.+++ .+|++.+...
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (136)
T 1mvo_A 47 KPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAK 84 (136)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECC
Confidence 6899999876643 44444433 4677766543
No 435
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=27.34 E-value=78 Score=23.92 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=28.5
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 11 VIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 11 il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
|.+..-+|.|=-.-...||..|+++|++|.++=.
T Consensus 5 Iavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~ 38 (289)
T 2afh_E 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGC 38 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4555557889999999999999999999998843
No 436
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=27.31 E-value=90 Score=23.98 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=24.3
Q ss_pred ceEEEEcCC--CCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYP--SQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p--~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.++++++.. +.| -=..++++|+++|++|.++.
T Consensus 9 ~k~~lVTGa~~s~G---IG~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 9 GKTAFVAGVADSNG---YGWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp TCEEEEECCCCTTS---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCCCc---HHHHHHHHHHHCCCEEEEEe
Confidence 367888886 333 24689999999999998864
No 437
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=27.30 E-value=48 Score=24.88 Aligned_cols=35 Identities=23% Similarity=0.463 Sum_probs=26.8
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
..+++++..+. | +.|++.+.+.|.++|.+|+++-.
T Consensus 110 ~~~~lliagGt-G-itP~~s~l~~l~~~~~~v~l~~~ 144 (262)
T 1ep3_B 110 TDKILIIGGGI-G-VPPLYELAKQLEKTGCQMTILLG 144 (262)
T ss_dssp TSEEEEEEEGG-G-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCeEEEEECcC-c-HHHHHHHHHHHHHcCCeEEEEEE
Confidence 34666665554 4 89999999999998888888753
No 438
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=27.23 E-value=69 Score=22.67 Aligned_cols=31 Identities=16% Similarity=-0.041 Sum_probs=19.3
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
+||+||.|..++. +..+.+++ ++|++.+...
T Consensus 51 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 51 DPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp CCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 5899998887643 45555443 4566665544
No 439
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=27.21 E-value=1.5e+02 Score=20.21 Aligned_cols=38 Identities=11% Similarity=0.072 Sum_probs=28.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++||+++.+++.. ..-+......|...|++|++++...
T Consensus 2 ~~ki~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFE-DLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCcc-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5689999988753 3445556677778899999998764
No 440
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=27.02 E-value=51 Score=25.06 Aligned_cols=32 Identities=28% Similarity=0.212 Sum_probs=24.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
++|.|+-.+..| ..+++.|+++||+|+++...
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 367888666665 45789999999999998543
No 441
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=26.98 E-value=60 Score=24.09 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+++++++.+.| -=..++++|+++|++|.++.-
T Consensus 7 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 7 KGLAIITGASQG---IGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 467788877642 346899999999999988753
No 442
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=26.96 E-value=78 Score=22.60 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=21.3
Q ss_pred CceEEEeCCccch--HHHHHHH----hCCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARI----LGIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~----lgiP~i~~~~~~ 147 (185)
+||+||.|...+. +..+.++ -++|++.+....
T Consensus 48 ~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~ 85 (230)
T 2oqr_A 48 GADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARD 85 (230)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCC
Confidence 6899999987643 4444433 368888776654
No 443
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=26.95 E-value=56 Score=23.61 Aligned_cols=32 Identities=28% Similarity=0.196 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.|.++++..+.| -=..++++|+++|++|.++.
T Consensus 6 ~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~ 37 (223)
T 3uce_A 6 KTVYVVLGGTSG---IGAELAKQLESEHTIVHVAS 37 (223)
T ss_dssp CEEEEEETTTSH---HHHHHHHHHCSTTEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEec
Confidence 477888877753 35688999999999998875
No 444
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=26.95 E-value=1.3e+02 Score=22.57 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.++++++..+.| -=..++++|+++|++|.++.-.
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 27 DKQVAIVTGASRG---IGRAIALELARRGAMVIGTATT 61 (270)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888887642 3468999999999999877543
No 445
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=26.88 E-value=95 Score=23.40 Aligned_cols=33 Identities=12% Similarity=0.023 Sum_probs=25.4
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+. --=..++++|+++|++|.++.-
T Consensus 32 gk~~lVTGas~---GIG~aia~~la~~G~~V~~~~r 64 (276)
T 3r1i_A 32 GKRALITGAST---GIGKKVALAYAEAGAQVAVAAR 64 (276)
T ss_dssp TCEEEEESTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 46778887764 2346899999999999988754
No 446
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=26.85 E-value=80 Score=23.74 Aligned_cols=32 Identities=22% Similarity=0.199 Sum_probs=24.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+++++.+.| -=..++++|+++|++|.++.-
T Consensus 5 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 5 KVILITGASGG---IGEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCccH---HHHHHHHHHHHCCCEEEEEEC
Confidence 67788877642 346899999999999988753
No 447
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=26.69 E-value=1.2e+02 Score=22.15 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=26.2
Q ss_pred CceEEEEcCCC--CCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPS--QGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~--~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
..-|+++..++ .|...-...+++.|+++|+.|..+-
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d 87 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLE 87 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEe
Confidence 34466666544 3666778899999999999887764
No 448
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=26.61 E-value=42 Score=27.49 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=25.1
Q ss_pred EEEEcCCC---CCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 11 VIVLPYPS---QGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 11 il~~~~p~---~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
.++=|++- -||+.|+..+ +.|++.||++.++..+.
T Consensus 69 ~G~dPTg~sLHlGhlv~l~~l-~~lQ~~G~~~~~lIgD~ 106 (392)
T 1y42_X 69 VGIDPTAPSLHVGHLLPLMPL-FWMYLEGYKAFTLIGGS 106 (392)
T ss_dssp EEECCCSSSCBGGGHHHHHHH-HHHHHHTCEEEEEECTT
T ss_pred EeecCCCCCccHHHHHHHHHH-HHHHHcCCcEEEEEcCc
Confidence 34556644 3999987665 58888999998886543
No 449
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=26.38 E-value=77 Score=23.83 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 11 DRTYLVTGGGSG---IGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788877643 346889999999999988753
No 450
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=26.29 E-value=41 Score=26.54 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=25.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
..+|.|+-.+..| ..+|..|+++||+|+++...
T Consensus 6 ~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3578888666555 47889999999999998544
No 451
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.26 E-value=1.1e+02 Score=23.44 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=25.2
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+.| -=..++++|+++|++|.++.-
T Consensus 26 ~k~vlVTGas~g---IG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 26 GKSVIITGSSNG---IGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367788877642 356889999999999988754
No 452
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=26.23 E-value=1.5e+02 Score=23.39 Aligned_cols=40 Identities=20% Similarity=0.162 Sum_probs=28.2
Q ss_pred CCC-CCCCceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 2 GSI-GVTKQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 2 ~~~-~~~~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+++ +...++|+++-. | ..-..+++++.++|++|..+....
T Consensus 4 ~~pm~~~~~~ili~g~---g--~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 4 GTALRPAATRVMLLGS---G--ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp CCTTSTTCCEEEEESC---S--HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCCCCEEEEECC---C--HHHHHHHHHHHHcCCEEEEEECCC
Confidence 344 345678988844 3 245788999999999998886543
No 453
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=26.21 E-value=1.2e+02 Score=22.75 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=26.8
Q ss_pred CceEEEEcCCCC-CChH---HHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQ-GHIT---PMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~-GH~~---P~l~La~~La~rGh~Vt~it~~ 45 (185)
+++|+++..+.. -|-. .-..++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 367888765432 2222 3468999999999999988765
No 454
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=26.07 E-value=37 Score=26.37 Aligned_cols=33 Identities=21% Similarity=0.048 Sum_probs=25.5
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++||+++-.++.|- .++..|+ .||+|+++.-..
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 37888886666553 6788899 999999987654
No 455
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=26.04 E-value=1.2e+02 Score=25.05 Aligned_cols=39 Identities=23% Similarity=0.295 Sum_probs=32.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEcCCcc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSK-GFHVTFVNTEFN 47 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~~ 47 (185)
..|+++.-+|.|=..-...||..|+.+ |++|.++..+.+
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~ 140 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVY 140 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 355566667889999999999999999 999999987654
No 456
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=26.00 E-value=92 Score=24.38 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=30.8
Q ss_pred CceEEEEcC-CCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPY-PSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~-p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
..||..+.. +|.|=-+-...||.+|+++|.+|-++=.+
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 356665555 77788899999999999999999998544
No 457
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=25.97 E-value=75 Score=23.62 Aligned_cols=47 Identities=19% Similarity=0.291 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhCCCCCCceEEEeCCccchHHHHHHHhCCCcEEEccc
Q 029948 100 PFLELLGKLNSAGNVPQVTCVVSDGIMGFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 100 ~~~~ll~~l~~~~~~~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~~~ 146 (185)
.++++++.+.+..-....-+||+|---..+...|+++|||+..+.+.
T Consensus 21 nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~ 67 (215)
T 3kcq_A 21 NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRK 67 (215)
T ss_dssp HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBT
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcc
Confidence 44556655432100013567888754445678999999999987553
No 458
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=25.92 E-value=53 Score=26.14 Aligned_cols=31 Identities=26% Similarity=0.476 Sum_probs=23.4
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.+|+|+-.+-.| +.+|..|+++|++|+++=
T Consensus 26 ~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E 56 (398)
T 2xdo_A 26 DKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYE 56 (398)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEe
Confidence 3467777655434 678899999999999984
No 459
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=25.89 E-value=83 Score=24.51 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=24.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.++++..+.| -=..++++|+++|++|.++.
T Consensus 47 k~~lVTGas~G---IG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEc
Confidence 57788877643 45689999999999998876
No 460
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=25.84 E-value=72 Score=26.81 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=28.0
Q ss_pred CCceEEEEcCCCCCChHHHHHHHHHHHhC-CC-eEEEEcCC
Q 029948 7 TKQHVIVLPYPSQGHITPMMQLAKLLHSK-GF-HVTFVNTE 45 (185)
Q Consensus 7 ~~~~il~~~~p~~GH~~P~l~La~~La~r-Gh-~Vt~it~~ 45 (185)
..++|.++-.+..| ..+|..|+++ || +|+++-..
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 34789999877777 5789999999 99 99998644
No 461
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=25.80 E-value=1.1e+02 Score=22.46 Aligned_cols=40 Identities=10% Similarity=-0.053 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEeCC-cc-chHHHHHHHhCCCcEEEccc
Q 029948 99 APFLELLGKLNSAGNVPQVTCVVSDG-IM-GFGAKAARILGIPDVQLWTA 146 (185)
Q Consensus 99 ~~~~~ll~~l~~~~~~~~~D~vI~D~-~~-~~~~~vA~~lgiP~i~~~~~ 146 (185)
..++++++ -+||+||... .. .....--++.|||++.+...
T Consensus 48 ~n~E~i~~--------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~ 89 (245)
T 1n2z_A 48 MNLERIVA--------LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT 89 (245)
T ss_dssp ECHHHHHH--------TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCC
T ss_pred CCHHHHhc--------cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCC
Confidence 45566664 2799999742 22 22344446889999877543
No 462
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=25.79 E-value=97 Score=23.07 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=25.9
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+++++++.+.| -=..++++|+++|++|.++...
T Consensus 25 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 25 KRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEECS
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcCC
Confidence 477888887642 3468899999999999887633
No 463
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=25.72 E-value=81 Score=23.55 Aligned_cols=39 Identities=5% Similarity=0.035 Sum_probs=30.3
Q ss_pred ceEEEEcCCCCCChHHHHHHH------HHHHhCC-CeEEEEcCCcc
Q 029948 9 QHVIVLPYPSQGHITPMMQLA------KLLHSKG-FHVTFVNTEFN 47 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La------~~La~rG-h~Vt~it~~~~ 47 (185)
.+.++++.++++.++.++.-+ ++|.+.| .+|.+.+....
T Consensus 28 ~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~ 73 (224)
T 2jzc_A 28 EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY 73 (224)
T ss_dssp SCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc
Confidence 466788888887789887766 8888888 78888776543
No 464
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=25.68 E-value=68 Score=23.78 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=21.7
Q ss_pred CCceEEEeCCccch--HHHHHHHh-----CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~~ 147 (185)
.+||+||.|..++. +..+++++ ++|++.++...
T Consensus 172 ~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~lt~~~ 211 (254)
T 2ayx_A 172 NHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANA 211 (254)
T ss_dssp SCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEEESST
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 36999999987653 34444332 58888776654
No 465
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=25.58 E-value=97 Score=23.77 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=24.6
Q ss_pred ceEEEEcCCC-CCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPS-QGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~-~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.|++++++.+ .|-+ =..++++|+++|++|.++.
T Consensus 9 gk~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 9 GQTAFVAGVADSHGY--GWAIAKHLASAGARVALGT 42 (315)
T ss_dssp TCEEEEECCSSSSSH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCCCCCCh--HHHHHHHHHHCCCEEEEEe
Confidence 4678888872 3333 4689999999999998864
No 466
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.53 E-value=78 Score=19.91 Aligned_cols=32 Identities=16% Similarity=-0.076 Sum_probs=20.1
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTA 146 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~ 146 (185)
.+||+||.|...+. +..+.+++ ++|++.+...
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 36999999986643 45544432 3677766554
No 467
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=25.49 E-value=1.1e+02 Score=23.14 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=21.8
Q ss_pred CceEEE-eCCc-cchHHHHHHHhCCCcEEEc
Q 029948 116 QVTCVV-SDGI-MGFGAKAARILGIPDVQLW 144 (185)
Q Consensus 116 ~~D~vI-~D~~-~~~~~~vA~~lgiP~i~~~ 144 (185)
++|+|+ .+.- .+.+..+|+++|+|++..-
T Consensus 100 ~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vr 130 (243)
T 3dez_A 100 EVEVIAGTATAGIPHGAIIADKMNLPLAYIR 130 (243)
T ss_dssp TCCEEEEETTTTHHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEEecCchHHHHHHHHHHcCCCEEEEE
Confidence 689888 4543 3667889999999987643
No 468
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=25.42 E-value=98 Score=23.42 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=29.0
Q ss_pred eEEEEc--CCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLP--YPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~--~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
++..+. -+|.|=-.-...||..|+++|.+|.++=.+.
T Consensus 5 kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 5 RVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp EEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 344443 3778999999999999999999999885443
No 469
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=25.39 E-value=39 Score=24.27 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCeEEEEcCC
Q 029948 26 MQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 26 l~La~~La~rGh~Vt~it~~ 45 (185)
..++++|.++||+|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 68899999999999988643
No 470
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=25.32 E-value=1.1e+02 Score=20.39 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=18.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
..|.+..+-. .. ..+..--.+.++||.+|.+++...
T Consensus 28 ~~I~i~~~~~-~~-~~i~~aL~~a~~rGV~Vril~~~~ 63 (155)
T 1byr_A 28 TSIRMMAYSF-TA-PDIMKALVAAKKRGVDVKIVIDER 63 (155)
T ss_dssp SEEEEEESSB-CC-HHHHHHHHHHHHTTCEEEEEEEST
T ss_pred hEEEEEEEEe-CC-HHHHHHHHHHHHCCCEEEEEEeCc
Confidence 3455444333 22 233333344456788887776543
No 471
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=25.30 E-value=44 Score=26.66 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=20.7
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+|+++-.+..| +.-|..|+++|++|+++=
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE 30 (425)
T 3ka7_A 2 KTVVIGAGLGG-----LLSAARLSKAGHEVEVFE 30 (425)
T ss_dssp EEEEECCBHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cEEEECCCHHH-----HHHHHHHHhCCCceEEEe
Confidence 45555444333 677899999999999983
No 472
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=25.23 E-value=41 Score=26.96 Aligned_cols=33 Identities=33% Similarity=0.352 Sum_probs=26.6
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++|.++-.+..| ..+++.|+++||+|+++...
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4689888776655 46899999999999998754
No 473
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=25.11 E-value=59 Score=27.30 Aligned_cols=27 Identities=15% Similarity=0.090 Sum_probs=20.9
Q ss_pred CCceEEEeCCccchHHHHHHHhCCCcEEEc
Q 029948 115 PQVTCVVSDGIMGFGAKAARILGIPDVQLW 144 (185)
Q Consensus 115 ~~~D~vI~D~~~~~~~~vA~~lgiP~i~~~ 144 (185)
.+||++|... ....+|+++|||++-+.
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEEec
Confidence 3799999754 45678999999998543
No 474
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=25.11 E-value=1.2e+02 Score=22.59 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=25.1
Q ss_pred ceEEEEcCCC-CCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 9 QHVIVLPYPS-QGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 9 ~~il~~~~p~-~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.+.++++..+ .|-+ =..++++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGa~~s~gI--G~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 7 GKRILVSGIITDSSI--AFHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp TCEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CCEEEEECCCCCCch--HHHHHHHHHHCCCEEEEEecC
Confidence 3667788761 3333 468999999999999887543
No 475
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.98 E-value=90 Score=19.95 Aligned_cols=33 Identities=18% Similarity=0.051 Sum_probs=20.0
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 53 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 94 (143)
T 3cnb_A 53 VKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGAL 94 (143)
T ss_dssp TCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSC
T ss_pred cCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCC
Confidence 36899999876542 44444433 35777665544
No 476
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=24.91 E-value=1.3e+02 Score=22.30 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=23.6
Q ss_pred eEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEE
Q 029948 10 HVIVLPYPSQG----HITPMMQLAKLLHSKGFHVTF 41 (185)
Q Consensus 10 ~il~~~~p~~G----H~~P~l~La~~La~rGh~Vt~ 41 (185)
+|.+++....+ ...-..+|++.|+++|+.|..
T Consensus 15 ~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 15 RICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp EEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 58899665554 235678899999999987754
No 477
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=24.89 E-value=84 Score=23.30 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=24.6
Q ss_pred ceEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+. |-+ =..++++|+++|++|.++.-
T Consensus 8 ~k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r 42 (261)
T 2wyu_A 8 GKKALVMGVTNQRSL--GFAIAAKLKEAGAEVALSYQ 42 (261)
T ss_dssp TCEEEEESCCSSSSH--HHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEcC
Confidence 35677777652 333 35799999999999988754
No 478
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=24.78 E-value=52 Score=23.95 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=22.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
+.+++++.+ |- -=..++++|+++|++|+++.-
T Consensus 2 k~vlVtGas-g~--iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSA-SG--IGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-cH--HHHHHHHHHHhCCCEEEEEeC
Confidence 345555544 32 345789999999999998753
No 479
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=24.78 E-value=37 Score=25.37 Aligned_cols=30 Identities=23% Similarity=0.213 Sum_probs=22.0
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
++|.|+-.+..| ..+++.|++.||+|++..
T Consensus 1 M~I~iIG~G~mG-----~~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVA-----QTLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHH-----HHHHHHHHHCCCeEEEeC
Confidence 467777554444 357999999999999853
No 480
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=24.77 E-value=96 Score=23.49 Aligned_cols=35 Identities=9% Similarity=0.047 Sum_probs=28.0
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+-|++++|..+.| -=..++++|+++|.+|.+..-.
T Consensus 6 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vv~~~r~ 40 (258)
T 4gkb_A 6 QDKVVIVTGGASG---IGGAISMRLAEERAIPVVFARH 40 (258)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 4589999998875 3478899999999999887643
No 481
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=24.69 E-value=61 Score=23.56 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=25.7
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++++-.+..|+..-+..+++.|+++|+.|..+-..
T Consensus 55 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 90 (262)
T 1jfr_A 55 GAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTN 90 (262)
T ss_dssp EEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCS
T ss_pred CEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCC
Confidence 344444445566667788999999999998887543
No 482
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=24.67 E-value=78 Score=23.64 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=22.8
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
++|++. + + |- --..|+++|.++||+|+.++-
T Consensus 4 ~~ilVt-G-a-G~--iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIA-G-C-GD--LGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCEEEE-C-C-SH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEE-C-C-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 466655 4 4 63 345789999999999999854
No 483
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.63 E-value=40 Score=21.61 Aligned_cols=31 Identities=13% Similarity=-0.040 Sum_probs=18.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-----CCCcEEEccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-----GIPDVQLWTA 146 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-----giP~i~~~~~ 146 (185)
+||+||.|...+. +..+.+++ ++|++.+...
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC
Confidence 5888888876543 44444433 3666655443
No 484
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=24.58 E-value=64 Score=24.39 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=23.6
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
++|+|+-.+..|. .+++.|++.||+|+++.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 6888886666664 47888999999998775
No 485
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=24.58 E-value=50 Score=26.44 Aligned_cols=29 Identities=14% Similarity=0.291 Sum_probs=21.1
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+|+++-.+..| +..|..|+++|++|+++=
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE 30 (421)
T 3nrn_A 2 RAVVVGAGLGG-----LLAGAFLARNGHEIIVLE 30 (421)
T ss_dssp EEEEESCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred cEEEECCCHHH-----HHHHHHHHHCCCeEEEEe
Confidence 45555444433 678899999999999983
No 486
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=24.56 E-value=54 Score=26.25 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=26.6
Q ss_pred EEEEcCCCC--CChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 11 VIVLPYPSQ--GHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 11 il~~~~p~~--GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
.++=|++.. ||+.|.+.-.+.|++.||++.++..+
T Consensus 17 ~G~~PTG~lHLGn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 17 SGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp EEECCCSSCBHHHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred EeeCCCCcccHHhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 345555543 88888887888899999999888755
No 487
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=24.48 E-value=1.2e+02 Score=23.42 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=25.3
Q ss_pred ceEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 9 QHVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 9 ~~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
.+.++++..+.| -=..++++|+++|++|.++.
T Consensus 27 gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~ 58 (322)
T 3qlj_A 27 GRVVIVTGAGGG---IGRAHALAFAAEGARVVVND 58 (322)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEe
Confidence 477888887742 34689999999999998874
No 488
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A
Probab=24.45 E-value=79 Score=26.87 Aligned_cols=41 Identities=17% Similarity=0.355 Sum_probs=25.4
Q ss_pred CCCCCceEEEEcC-CC------CCChHHHH---HHHHHHHhCCCeEEEEcC
Q 029948 4 IGVTKQHVIVLPY-PS------QGHITPMM---QLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 4 ~~~~~~~il~~~~-p~------~GH~~P~l---~La~~La~rGh~Vt~it~ 44 (185)
++.++.++.+... |. .||....+ -++|.|..+|++|.++..
T Consensus 13 ~~~~~~~~~v~~~~py~ng~lHiGH~r~~v~~D~laR~~r~~G~~V~~~~g 63 (560)
T 3h99_A 13 MTQVAKKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICA 63 (560)
T ss_dssp ----CCEEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCcEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCCeEEEeee
Confidence 3445566665433 43 27775544 478899999999999864
No 489
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=24.45 E-value=1.1e+02 Score=23.71 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=24.4
Q ss_pred eEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEc
Q 029948 10 HVIVLPYPSQ-GHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 10 ~il~~~~p~~-GH~~P~l~La~~La~rGh~Vt~it 43 (185)
|++++++.+. |=+ =.+++++|+++|++|.+..
T Consensus 3 k~~lITGas~~~GI--G~aiA~~la~~G~~Vv~~~ 35 (329)
T 3lt0_A 3 DICFIAGIGDTNGY--GWGIAKELSKRNVKIIFGI 35 (329)
T ss_dssp CEEEEECCSSSSSH--HHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCCCCch--HHHHHHHHHHCCCEEEEEe
Confidence 6788888653 223 4689999999999998764
No 490
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=24.42 E-value=1.5e+02 Score=21.55 Aligned_cols=31 Identities=6% Similarity=0.100 Sum_probs=19.5
Q ss_pred CCceEEEeCCcc---chHHHHHHHhCCCcEEEcc
Q 029948 115 PQVTCVVSDGIM---GFGAKAARILGIPDVQLWT 145 (185)
Q Consensus 115 ~~~D~vI~D~~~---~~~~~vA~~lgiP~i~~~~ 145 (185)
.++|.||.-... ......+.+.|+|+|.+..
T Consensus 57 ~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (272)
T 3o74_A 57 RRCDALFVASCLPPEDDSYRELQDKGLPVIAIDR 90 (272)
T ss_dssp TTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESS
T ss_pred cCCCEEEEecCccccHHHHHHHHHcCCCEEEEcc
Confidence 367877764433 2244556677899887754
No 491
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=24.42 E-value=54 Score=23.76 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=23.6
Q ss_pred eEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEcCC
Q 029948 10 HVIVLPYPSQGHITPMMQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 10 ~il~~~~p~~GH~~P~l~La~~La~rGh~Vt~it~~ 45 (185)
+.+++++.+ |- --..++++|+++|++|.++.-.
T Consensus 6 k~vlVtGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 6 GAVLITGAS-RG--IGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEECC
Confidence 456666655 32 3468999999999999887543
No 492
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=24.38 E-value=49 Score=23.74 Aligned_cols=20 Identities=30% Similarity=0.313 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCeEEEEcCC
Q 029948 26 MQLAKLLHSKGFHVTFVNTE 45 (185)
Q Consensus 26 l~La~~La~rGh~Vt~it~~ 45 (185)
..++++|.++||+|+.+.-.
T Consensus 18 ~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 18 SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp HHHHHHHHTTTCEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEEcC
Confidence 57899999999999998644
No 493
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=24.20 E-value=49 Score=27.36 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=25.6
Q ss_pred eEEEEcCCC-C--CChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 10 HVIVLPYPS-Q--GHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 10 ~il~~~~p~-~--GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
-.++=|++. . ||+.|+..+ +.|++.||++.++..+.
T Consensus 36 y~G~dPTg~sLHlGh~v~l~~~-~~lQ~~G~~~~~lIgd~ 74 (420)
T 1jil_A 36 YCGADPTADSLHIGHLLPFLTL-RRFQEHGHRPIVLIGGG 74 (420)
T ss_dssp EEEECCSSSSCBHHHHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred EEeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 344556644 2 899986655 68999999998886553
No 494
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=24.19 E-value=85 Score=24.29 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=21.0
Q ss_pred CceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 116 QVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 116 ~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
+||+||.|..++. +..+.+++ ++|++.++...
T Consensus 63 ~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~~s~~~ 103 (358)
T 3bre_A 63 KPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIVLSTKE 103 (358)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEEEESSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEEEeCCC
Confidence 5899999987753 56666554 36677665543
No 495
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=24.15 E-value=1.1e+02 Score=22.80 Aligned_cols=39 Identities=8% Similarity=0.108 Sum_probs=33.5
Q ss_pred CceEEEEcCC-CCCChHHHHHHHHHHHhCCCeEEEEcCCc
Q 029948 8 KQHVIVLPYP-SQGHITPMMQLAKLLHSKGFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p-~~GH~~P~l~La~~La~rGh~Vt~it~~~ 46 (185)
+..+.+++++ |.|=-.-++.++.++..+|.+|.++.+..
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 4578888887 89999999999999999999998886543
No 496
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=24.10 E-value=1.6e+02 Score=20.10 Aligned_cols=36 Identities=19% Similarity=0.101 Sum_probs=24.3
Q ss_pred CceEEEEcCC----CCCChHHHHHHHHHHHhCCCeEEEEc
Q 029948 8 KQHVIVLPYP----SQGHITPMMQLAKLLHSKGFHVTFVN 43 (185)
Q Consensus 8 ~~~il~~~~p----~~GH~~P~l~La~~La~rGh~Vt~it 43 (185)
+.-|+++... +...-.-+..+++.|+++|+.|..+-
T Consensus 31 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 70 (208)
T 3trd_A 31 SVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFN 70 (208)
T ss_dssp SEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEe
Confidence 3445555541 44444556889999999999987753
No 497
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.08 E-value=36 Score=23.83 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=24.3
Q ss_pred CceEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEcCCc
Q 029948 8 KQHVIVLPYPSQGHITPMMQLAKLLHSK-GFHVTFVNTEF 46 (185)
Q Consensus 8 ~~~il~~~~p~~GH~~P~l~La~~La~r-Gh~Vt~it~~~ 46 (185)
..|++++-. |.+ -..+++.|.++ |++|+++....
T Consensus 39 ~~~v~IiG~---G~~--G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGM---GRI--GTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECC---SHH--HHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECC---CHH--HHHHHHHHHhccCCeEEEEECCH
Confidence 458888843 333 35678999999 99999986543
No 498
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.06 E-value=1.5e+02 Score=21.75 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=24.4
Q ss_pred ceEEEEcCCC--CCChHHHHHHHHHHHhCCCeEEEEcC
Q 029948 9 QHVIVLPYPS--QGHITPMMQLAKLLHSKGFHVTFVNT 44 (185)
Q Consensus 9 ~~il~~~~p~--~GH~~P~l~La~~La~rGh~Vt~it~ 44 (185)
.+.++++..+ .| -=..++++|+++|++|.++.-
T Consensus 7 ~k~vlVTGasg~~G---IG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 7 GRNIVVMGVANKRS---IAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp TCEEEEECCCSTTS---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEcCCCCCc---HHHHHHHHHHHCCCEEEEecC
Confidence 3667777765 22 246899999999999988753
No 499
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=23.87 E-value=1e+02 Score=21.85 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=23.2
Q ss_pred eEEEEcCCCCC----ChHHHHHHHHHHHhCCCeEEE
Q 029948 10 HVIVLPYPSQG----HITPMMQLAKLLHSKGFHVTF 41 (185)
Q Consensus 10 ~il~~~~p~~G----H~~P~l~La~~La~rGh~Vt~ 41 (185)
.|.++.+-..+ +..-..+|++.|+++|+.|..
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~ 38 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLAC 38 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEe
Confidence 46677664443 567889999999999866554
No 500
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=23.82 E-value=63 Score=20.30 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=20.9
Q ss_pred CCceEEEeCCccch--HHHHHHHh-------CCCcEEEcccc
Q 029948 115 PQVTCVVSDGIMGF--GAKAARIL-------GIPDVQLWTAS 147 (185)
Q Consensus 115 ~~~D~vI~D~~~~~--~~~vA~~l-------giP~i~~~~~~ 147 (185)
.+||+||.|...+. +..+.+++ ++|++.+....
T Consensus 45 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (127)
T 2jba_A 45 PWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTARG 86 (127)
T ss_dssp SCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEETT
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCCC
Confidence 36899999986643 45555443 46777665543
Done!