BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029958
(185 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GR35|F206A_XENLA Protein FAM206A OS=Xenopus laevis GN=fam206a PE=2 SV=1
Length = 183
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 21 LTPPSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFN 79
L PS +D F ++ PD KP D + +H+N +C+I LA H ++E I ++ +
Sbjct: 8 LAFPSVVDRYFTRWYKPDIKGKPCEDHCILQHSNRICIITLAECHPLLQNEKTIKSISYQ 67
Query: 80 VGKS-DRSGFKVTGKRKKNAQHFESNTAVCKVC-TNNDSYIVRCCVKGSLLEVNNRLIKQ 137
+ + R KV+GK K+ AQ +C++ T+ + Y + C++G LLEVN +++
Sbjct: 68 ISANCSRLQNKVSGKSKRGAQFLTELAPLCRISSTDGEEYTIYSCIRGRLLEVNENILQN 127
Query: 138 PGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
PGLL EGYIA+++PK + I LL +Y+
Sbjct: 128 PGLLKEKPSTEGYIAVVLPKFEESKTITEGLLSQREYE 165
>sp|Q80ZQ9|F206A_MOUSE Protein FAM206A OS=Mus musculus GN=Fam206a PE=2 SV=2
Length = 193
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 23 PPSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVG 81
PPS +D F ++ D KP D + +H+N +CVI LA +H + I + + +
Sbjct: 24 PPSLVDRYFTRWYKADVKGKPCEDHCILQHSNRICVITLAGSHPVLQSGKAIQRISYQIS 83
Query: 82 KS-DRSGFKVTGKRKKNAQHFESNTAVCKV-CTNNDSYIVRCCVKGSLLEVNNRLIKQPG 139
+ R KV+GK K+ AQ +CK+ C++ + Y + CV+G L+EVN ++ QP
Sbjct: 84 NNCSRLENKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTISSCVRGRLMEVNENILHQPS 143
Query: 140 LLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
LL EGYIA+++PK + + LL + Y+
Sbjct: 144 LLQEKPSTEGYIAVVLPKFEESKSVTEGLLTQQQYE 179
>sp|Q29S16|F206A_BOVIN Protein FAM206A OS=Bos taurus GN=FAM206A PE=2 SV=1
Length = 187
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 16 VHDLPLTP--PSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGG 72
V DL P PS +D F ++ D KP D + +H+N +CVI LA +H +
Sbjct: 9 VADLAPEPAVPSLVDRYFTRWYKADVKGKPCEDHCILQHSNRICVITLAGSHPVLQSGKT 68
Query: 73 ITAVDFNVGKS-DRSGFKVTGKRKKNAQHFESNTAVCKV-CTNNDSYIVRCCVKGSLLEV 130
I ++ + + + R KV+GK K+ AQ +CK+ C++ + Y + CV+G L+EV
Sbjct: 69 IKSISYQISTNCSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTISSCVRGRLMEV 128
Query: 131 NNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
N ++ +P +L EGYIA+++PK + I LL ++Y+
Sbjct: 129 NENILHKPSILQEKPSTEGYIAVVLPKFEESKSITEGLLTQKEYE 173
>sp|Q1LU93|F206A_DANRE Protein FAM206A OS=Danio rerio GN=fam206a PE=2 SV=1
Length = 177
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 24 PSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGK 82
PS ID F ++ D KP D + +H+N +CVI LA +H F++ I +++ +
Sbjct: 10 PSVIDRYFTRWYRTDLKGKPCEDHCILQHSNRICVITLAESHPIFQNGRKIKNINYQISD 69
Query: 83 S-DRSGFKVTGKRKKNAQHFESNTAVCKV-CTNNDSYIVRCCVKGSLLEVNNRLIKQPGL 140
R KV+GK K+ Q +C++ CT+ + + C++G LLEVN ++ +P L
Sbjct: 70 GCSRLKNKVSGKSKRGGQFLTEFAPLCRITCTDEQEFTIFSCIRGRLLEVNEVILNKPDL 129
Query: 141 LNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
L EGYIA+I+PK + + LL E Y+
Sbjct: 130 LMEKPSTEGYIAVILPKFEESKSVTEGLLTREQYE 164
>sp|Q5RFS0|F206A_PONAB Protein FAM206A OS=Pongo abelii GN=FAM206A PE=2 SV=1
Length = 181
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 24 PSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGK 82
PS +D F ++ PD K D + +H+N +CVI LA +H + I ++ + +
Sbjct: 13 PSLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQIST 72
Query: 83 S-DRSGFKVTGKRKKNAQHFESNTAVCKV-CTNNDSYIVRCCVKGSLLEVNNRLIKQPGL 140
+ R KV+GK K+ AQ +CK+ C++ + Y V CV+G L+EVN ++ +P +
Sbjct: 73 NCSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSI 132
Query: 141 LNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
L EGYIA+++PK + I LL + Y+
Sbjct: 133 LQEKPSTEGYIAVVLPKFEESKSITEGLLTQKQYE 167
>sp|Q9NX38|F206A_HUMAN Protein FAM206A OS=Homo sapiens GN=FAM206A PE=2 SV=1
Length = 181
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 24 PSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGK 82
PS +D F ++ PD K D + +H+N +CVI LA +H + I ++ + +
Sbjct: 13 PSLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQIST 72
Query: 83 S-DRSGFKVTGKRKKNAQHFESNTAVCKV-CTNNDSYIVRCCVKGSLLEVNNRLIKQPGL 140
+ R KV+GK K+ AQ +CK+ C++ + Y V CV+G L+EVN ++ +P +
Sbjct: 73 NCSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSI 132
Query: 141 LNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
L EGYIA+++PK + I LL + Y+
Sbjct: 133 LQEKPSTEGYIAVVLPKFEESKSITEGLLTQKQYE 167
>sp|Q28G67|F206A_XENTR Protein FAM206A OS=Xenopus tropicalis GN=fam206a PE=2 SV=1
Length = 183
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 24 PSAIDFNFVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGK 82
PS +D F ++ D KP D + +H+N +C+I LA H ++ I + + +
Sbjct: 12 PSVVDRYFKRWYKSDVKGKPCEDHCILQHSNRICIITLAECHPLLQNGKTIKTISYQISA 71
Query: 83 S-DRSGFKVTGKRKKNAQHFESNTAVCKVC-TNNDSYIVRCCVKGSLLEVNNRLIKQPGL 140
+ R KV+GK K+ AQ + +C++ T+ + Y + C++G LLEVN +++ P L
Sbjct: 72 NCSRLQNKVSGKSKRGAQFLTEHAPLCRISSTDGEEYTIYSCIRGRLLEVNENILQNPEL 131
Query: 141 LNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYK 175
L EGYIA+++PK + + LL ++Y+
Sbjct: 132 LKEKPSTEGYIAVVLPKFEESKTVTEGLLSQQEYE 166
>sp|Q54TD9|F206_DICDI FAM206 family protein OS=Dictyostelium discoideum GN=DDB_G0281837
PE=3 SV=1
Length = 175
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 45 DQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESN 104
DQYV +H N L VIG+AP+H + E I+ ++F K + +V+G RK +SN
Sbjct: 27 DQYVNQHTNELAVIGVAPSHPVLQQE--ISKIEF---KENAINNEVSGVRKTGGFKLQSN 81
Query: 105 TAVCKV-CTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLK 163
T +C + C+N Y +R C+KG LLE+N LI P LL ++ G++AI+ P D
Sbjct: 82 TILCVITCSNGKEYFLRSCIKGKLLEINKELINNPSLLKTNHATSGFLAIVEPMIKDKFM 141
Query: 164 IKSSLLGLEDYKRKR 178
L+ E+Y + R
Sbjct: 142 ENPGLIKFEEYHKLR 156
>sp|Q9VFR1|F206_DROME FAM206 family protein CG9288 OS=Drosophila melanogaster GN=CG9288
PE=1 SV=1
Length = 214
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 3 DDEEELHKLLLPNVHDLPLTPPSAIDFNFVAYFAPDFLKPGHDQYVYRHANGLCVIGLAP 62
+++E KL+ P PS +D F Y+ + K V H+N +C+I LAP
Sbjct: 17 EEQEICGKLVAPITDSFQEDYPSVVDRFFTRYY---YFKGDVPYQVLYHSNRICLICLAP 73
Query: 63 THVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCT-NNDSYIVRC 121
H A GI++V+F++G DRS V GK KK ++ + + + T N +Y V
Sbjct: 74 EHPALAQ--GISSVNFDIGNVDRSQNVVKGKGKKGGMILQAESTLALLTTANGGTYKVPS 131
Query: 122 CVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKRK 177
C++G L+EVN ++++P LL + GY AI++PK + IK+SLL E Y+ +
Sbjct: 132 CIRGKLVEVNTAIVEEPKLLEQLPEGAGYFAILLPKIENCDAIKASLLTQEQYEER 187
>sp|Q5ZHW7|F206A_CHICK Protein FAM206A OS=Gallus gallus GN=FAM206A PE=2 SV=1
Length = 173
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 31 FVAYFAPDFL-KPGHDQYVYRHANGLCVIGLAPTHVAFKDEGGITAVDFNVGKS-DRSGF 88
F ++ D +P D V +H+N +CVI LA H + IT++++ + + R
Sbjct: 13 FTRWYKADVKGRPCEDFCVLQHSNRICVITLAEAHPLLQPGKTITSINYQISPNCSRLQN 72
Query: 89 KVTGKRKKNAQHFESNTAVCKVCTNN-DSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADR 147
KV+GK K+ AQ +C++ +++ + Y + ++G L+EVN ++ P LL
Sbjct: 73 KVSGKSKRGAQFLTELAPLCRIASSDGEEYTIYSFIRGRLIEVNENILSNPALLQEKPST 132
Query: 148 EGYIAIIMPKPADWLKIKSSLLGLEDYK 175
EGYIA+++PK + + LL E+YK
Sbjct: 133 EGYIAVVLPKFEESKSVTQGLLTPEEYK 160
>sp|P34452|YMA7_CAEEL Uncharacterized protein F54F2.7 OS=Caenorhabditis elegans
GN=F54F2.7 PE=4 SV=2
Length = 157
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 44 HDQYVY-RHANGLCVIGLAPTHVAFKDEGGITAVDFNVGK---SDRSGFKVTGKRKKNAQ 99
+D Y H +G+ V+ L E + VDF K +DRS +V+GK KK A
Sbjct: 22 YDNIAYLHHPSGVTVVVLRNI-----PESEVVEVDFGTTKKHGADRSTNQVSGKGKKGAL 76
Query: 100 HFESNTAVCKV-CTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAII 154
+ ++ +C C + ++VR V+G+L+E+N+RL P + ++ D +G+IAII
Sbjct: 77 ILQPDSKLCTFKCKDGSEHVVRAGVRGTLVEMNDRLKTTPDFIRTAPDNQGFIAII 132
>sp|P16048|GCSH_PEA Glycine cleavage system H protein, mitochondrial OS=Pisum sativum
GN=GDCSH PE=1 SV=1
Length = 165
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
AP+H K EG + + D G V + + V + + V
Sbjct: 44 APSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVN 103
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKRKREE 180
+ G ++EVN L +PGL+NSS +G++ I P D L+ SLLG ++Y + EE
Sbjct: 104 SPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTSPDELE---SLLGAKEYTKFCEE 160
>sp|P25855|GCSH1_ARATH Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis
thaliana GN=GDCSH PE=1 SV=1
Length = 165
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
A +H K EG + + D G V + ++ + V + + +
Sbjct: 44 ANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEIL 103
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMP-KPADWLKIKSSLLGLEDYKRKRE 179
+ G ++EVN +L + PGL+NSS +G++ + P PA+ SL+G ++Y + E
Sbjct: 104 SPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAE----LESLMGPKEYTKFCE 159
Query: 180 E 180
E
Sbjct: 160 E 160
>sp|P93255|GCSH_MESCR Glycine cleavage system H protein, mitochondrial
OS=Mesembryanthemum crystallinum GN=GDCSH PE=2 SV=1
Length = 163
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK-PADWLKIKSSLLGLEDYKRK 177
V + G ++EVN +L PGLLNSS EG++ + P PA+ SL+G ++Y +
Sbjct: 101 VNSPISGEIVEVNTKLSDSPGLLNSSPYEEGWMVKVKPSNPAE----LESLMGSKEYTKF 156
Query: 178 REE 180
EE
Sbjct: 157 CEE 159
>sp|P49359|GCSH_FLAPR Glycine cleavage system H protein, mitochondrial OS=Flaveria
pringlei GN=GDCSH PE=2 SV=1
Length = 162
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
A +H K EG + + D G V + T V + + V
Sbjct: 41 ANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVN 100
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKRKREE 180
+ G ++EVN++L + PGL+NSS +G++ + P L SL+G ++Y + EE
Sbjct: 101 SPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELD---SLMGAKEYTKFCEE 157
>sp|Q39732|GCSH_FLAAN Glycine cleavage system H protein, mitochondrial OS=Flaveria
anomala GN=GDCSH PE=2 SV=1
Length = 162
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
A +H K EG + + D G V + T V + + V
Sbjct: 41 ANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVN 100
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKRKREE 180
+ G ++EVN++L + PGL+NSS +G++ + P L SL+G ++Y + EE
Sbjct: 101 SPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELD---SLMGAKEYTKFCEE 157
>sp|P46485|GCSH_FLATR Glycine cleavage system H protein, mitochondrial OS=Flaveria
trinervia GN=GDCSH PE=2 SV=1
Length = 165
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
A +H K EG + + D G V + + T V + + V
Sbjct: 43 ANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGFGAVESVKATSDVN 102
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKRKREE 180
+ G ++EVN++L K PGL+N S +G++ + P L SL+G ++Y + EE
Sbjct: 103 SPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELD---SLMGPKEYTKFCEE 159
>sp|P49360|GCSH_FLAPU Glycine cleavage system H protein, mitochondrial (Fragment)
OS=Flaveria pubescens GN=GDCSH PE=2 SV=1
Length = 152
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
A +H K EG + V D G V + T V + + V
Sbjct: 41 ANSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVN 100
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDY 174
+ G ++EVN++L + PGL+NSS +G++ + P L SL+G ++Y
Sbjct: 101 SPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELD---SLMGAKEY 151
>sp|Q9LQL0|GCSH2_ARATH Probable glycine cleavage system H protein 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g32470 PE=1 SV=1
Length = 166
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 61 APTHVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
A +H K EG + + D G V + + + V + + +
Sbjct: 45 ANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEIL 104
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMP-KPADWLKIKSSLLGLEDYKRKRE 179
+ G ++EVN +L + PGL+NSS +G++ + P PA+ +L+G ++Y + E
Sbjct: 105 SPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAE----LEALMGPKEYTKFCE 160
Query: 180 E 180
E
Sbjct: 161 E 161
>sp|O67192|GCSH4_AQUAE Glycine cleavage system H protein 4 OS=Aquifex aeolicus (strain
VF5) GN=gcvH4 PE=3 SV=1
Length = 171
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 28/147 (19%)
Query: 34 YFAPDFLKPGHDQYVYRHA-----NGLCVIGLAPTHVAFKDEGGITAVDFNVGKSDRSGF 88
++ D+L G Y H NG +G+ T A K G I VD
Sbjct: 4 FYVEDYLVKGDRYYTKEHEWVRVKNGFAEVGI--TDYAQKQLGDIVYVDL---------- 51
Query: 89 KVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADRE 148
+ + ++ + + + + V V G+++EVN L +PG++N
Sbjct: 52 ------PEKGKEVDAGDTLANIESVKNVAPVYAPVTGTVVEVNEDLKDEPGIINDDPYEA 105
Query: 149 GYIAII-MPKPADWLKIKSSLLGLEDY 174
G+IA+I M P + L+ +DY
Sbjct: 106 GWIAVIEMKDPTE----VEDLMTAQDY 128
>sp|Q0A5H0|GCSH_ALHEH Glycine cleavage system H protein OS=Alkalilimnicola ehrlichei
(strain MLHE-1) GN=gcvH PE=3 SV=1
Length = 130
Score = 37.0 bits (84), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 98 AQHFESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK 157
+H+++ A V + + + V G ++E N+ L P L+N+ EG+I I P
Sbjct: 49 GRHYDAEEACAVVESVKAASDIYAPVGGEVIEANSELQDSPELVNTDPYGEGWIMRIRPD 108
Query: 158 PADWLKIKSSLLGLEDYK 175
+D L+ LL EDY+
Sbjct: 109 DSDDLE---QLLDPEDYQ 123
>sp|A3C6G9|GCSH_ORYSJ Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. japonica GN=GDCSH PE=1 SV=1
Length = 164
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMP 156
+ + G ++EVN++L + PGL+NSS +G++ + P
Sbjct: 102 INSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKP 139
>sp|A2Z9B8|GCSH_ORYSI Glycine cleavage system H protein, mitochondrial OS=Oryza sativa
subsp. indica GN=GDCSH PE=2 SV=1
Length = 164
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMP 156
+ + G ++EVN++L + PGL+NSS +G++ + P
Sbjct: 102 INSPISGEVVEVNDKLSETPGLINSSPYEDGWMIKVKP 139
>sp|B3DZN7|GCSH_METI4 Glycine cleavage system H protein OS=Methylacidiphilum infernorum
(isolate V4) GN=gcvH PE=3 SV=1
Length = 128
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 96 KNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYI 151
K + F V V + + + V G +L VN +L++QP L+NS+ EG+I
Sbjct: 45 KVGERFNQKAVVGVVESVKAASDLYAPVSGEILAVNTQLVEQPSLINSNPYGEGWI 100
>sp|O67573|GCSH2_AQUAE Glycine cleavage system H protein 2 OS=Aquifex aeolicus (strain
VF5) GN=gcvH2 PE=3 SV=1
Length = 161
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 63 THVAFK--DEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVR 120
V FK ++G +T ++G++ R+G + + K ++ + V + + + V
Sbjct: 23 NQVWFKVNEDGTVTVGVTDIGQA-RAGKIINIRIKPPGKYVKKGKPVASLESGKWAGPVP 81
Query: 121 CCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMP 156
++G ++E N +L +P L+N EG+IA + P
Sbjct: 82 ADIEGEVVERNEKLFDKPDLINEDPYGEGWIAKLKP 117
>sp|B1GYV6|GCSH_UNCTG Glycine cleavage system H protein OS=Uncultured termite group 1
bacterium phylotype Rs-D17 GN=gcvH PE=3 SV=1
Length = 124
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 80 VGKSDRSGFKVT----------GKRKKNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLE 129
VG +D + +++T GK+ K AQ V + ++ + + G +LE
Sbjct: 25 VGITDFAQYEITDVVHVELPEIGKQVKKAQ------PAAVVESVKSAFDIYSPLSGKILE 78
Query: 130 VNNRLIKQPGLLNSSADREGYIAII 154
VN+ +++ P ++N S GY+ II
Sbjct: 79 VNDSVLRSPEVINQSPYENGYLFII 103
>sp|Q51518|PHZA_PSECL Probable isochorismatase OS=Pseudomonas chlororaphis GN=phzA PE=3
SV=1
Length = 207
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 103 SNTA-VCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQ---PGLLNSSADREGYIAIIMPKP 158
SN A + + +N + GS+ E L+K PG+ S ADRE + + PKP
Sbjct: 57 SNAARIRQWAADNGVPVAYTAQPGSMSEEQRGLLKDFWGPGMKASPADRE-VVGALTPKP 115
Query: 159 ADWLKIK 165
DWL K
Sbjct: 116 GDWLLTK 122
>sp|Q9PGW7|GCSH_XYLFA Glycine cleavage system H protein OS=Xylella fastidiosa (strain
9a5c) GN=gcvH PE=3 SV=2
Length = 131
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 100 HFESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAII-MPKP 158
H ++ T + + + + V G ++EVN L +P +N EG+I +I M P
Sbjct: 51 HLDAGTTAAVIESVKAASDIYSPVTGKVIEVNTTLSDKPETINEDPYGEGWIMVIEMQAP 110
Query: 159 ADWLKIKSSLLGLEDYKRKRE 179
+ S LL +DY + E
Sbjct: 111 EE----ISDLLSPDDYTKVLE 127
>sp|O66720|GCSH5_AQUAE Glycine cleavage system H protein 5 OS=Aquifex aeolicus (strain
VF5) GN=gcvH5 PE=3 SV=1
Length = 148
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 39 FLKPGHDQYVY-RHANGLCVIGLAPTHVAFKDEGGITA-VDFNVGKSDRSGFKVTGKRKK 96
++ P + +++ + +G+ IGL T VA G + A VGK+ K+ K
Sbjct: 16 YINPDKNAFIWAKEEDGVFTIGL--TSVAAAMAGRLVAYTPKKVGKAV--------KKDK 65
Query: 97 NAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMP 156
+ ES V V + D G ++EVN L P L+N +G+IA +
Sbjct: 66 SVATIESGKWVGPVPSPFD---------GEIVEVNEALKGNPALVNDDPYGQGWIAKV-- 114
Query: 157 KPADWLKIKSSLL 169
KPA+ + KS L+
Sbjct: 115 KPANPEEAKSVLV 127
>sp|Q2K814|GCSH_RHIEC Glycine cleavage system H protein OS=Rhizobium etli (strain CFN 42
/ ATCC 51251) GN=gcvH PE=3 SV=1
Length = 120
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 64 HVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCV 123
H K EG + V D+ G V + + F N V + + V C +
Sbjct: 8 HEWLKIEGDVATVGITNYAVDQLGDLVFVELPEVGATFSKNGNAATVESVKAASDVYCPL 67
Query: 124 KGSLLEVNNRLIKQPGLLNSSADREGY-IAIIMPKPAD 160
G + EVN ++ P L+NS G+ + + PAD
Sbjct: 68 DGEITEVNPAIVADPSLVNSDPQGAGWFFKLKLANPAD 105
>sp|B5Y8S2|GCSH_COPPD Glycine cleavage system H protein OS=Coprothermobacter
proteolyticus (strain ATCC 35245 / DSM 5265 / BT)
GN=gcvH PE=3 SV=1
Length = 127
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKR 176
V V G ++EVN +L P ++N EG+IA+I + +D + + +L+ E+YK+
Sbjct: 69 VYSPVSGKVVEVNEKLKNSPEIINDDPYGEGWIAVI--ELSD-VSVLDTLMSAEEYKQ 123
>sp|C3MCZ7|GCSH_RHISN Glycine cleavage system H protein OS=Rhizobium sp. (strain NGR234)
GN=gcvH PE=3 SV=1
Length = 120
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 64 HVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCV 123
H K EGG+ V + + G V + + F + V + + V C +
Sbjct: 8 HEWLKVEGGVATVGITEHAAGQLGDLVFVELPEAGATFSKGDSAATVESVKAASDVYCPL 67
Query: 124 KGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPAD 160
G ++E+N ++ P L+NS D +G K AD
Sbjct: 68 DGEIVEINQAIVDDPSLVNS--DPQGAAWFFKLKLAD 102
>sp|B5ZQP7|GCSH_RHILW Glycine cleavage system H protein OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=gcvH PE=3 SV=1
Length = 120
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 64 HVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCV 123
H + EG + V D+ G V + + F N V + + V C +
Sbjct: 8 HEWLQIEGSVATVGITNYAVDQLGDLVFVELPEVGATFSKNGNAATVESVKAASDVYCPL 67
Query: 124 KGSLLEVNNRLIKQPGLLNSSADREGY-IAIIMPKPAD 160
G + EVN ++ P L+NS G+ + + PAD
Sbjct: 68 DGEITEVNPAIVADPSLVNSDPQGAGWFFKLKLANPAD 105
>sp|B8GPP4|SYP_THISH Proline--tRNA ligase OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=proS PE=3 SV=1
Length = 574
Score = 32.0 bits (71), Expect = 2.3, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 134 LIKQPGLLNSSADREGYIAIIMP--KPAD-------WLKIKSSLLGLEDYKRKREECFGS 184
L K GL+ DR G + ++MP +PA+ W + LL L+D + RE CFG
Sbjct: 50 LRKVEGLVRDEMDRAGALELLMPAVQPAELWQESGRWEQYGPELLRLKD-RHMREFCFGP 108
Query: 185 S 185
+
Sbjct: 109 T 109
>sp|Q9YDG2|GCSH_AERPE Probable glycine cleavage system H protein OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=gcvH PE=3 SV=2
Length = 143
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 96 KNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYI-AII 154
+ + + AV V + + + + G +++VN +L+ QP L+N EG+I I
Sbjct: 59 EKGRKVKKGEAVATVESIKATADIYAPLSGEIVDVNEKLLDQPELINDDPYGEGWIFKIK 118
Query: 155 MPKPADWLKIKSSLLGLEDY---KRKREE 180
+ P ++ SLL E Y RKR+E
Sbjct: 119 VEDPGEF----ESLLTPEQYVESVRKRKE 143
>sp|Q98QB3|PRIM_MYCPU DNA primase OS=Mycoplasma pulmonis (strain UAB CTIP) GN=dnaG PE=3
SV=1
Length = 602
Score = 31.2 bits (69), Expect = 4.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 74 TAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTN 113
TA +F +G D + +K+ K KKN F SN + K TN
Sbjct: 150 TASEFEIGYDDGNFWKIPNKEKKNFSFFLSNNLIVKKETN 189
>sp|Q54FI0|GCSH2_DICDI Glycine cleavage system H-like protein gcvH2 OS=Dictyostelium
discoideum GN=gcvH2 PE=3 SV=1
Length = 150
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 112 TNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSS 167
+N ++ + V G +LEVN +L K P LLN + + KP ++ K+ S
Sbjct: 84 SNATAFGLYAPVSGEVLEVNEKLKKSPSLLNEDPANNWMVKFKVSKPDEFKKLMDS 139
>sp|A9L331|GCSH_SHEB9 Glycine cleavage system H protein OS=Shewanella baltica (strain
OS195) GN=gcvH PE=3 SV=1
Length = 129
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK 157
+ + G ++ VN L P L+NSSA EG+ +MP
Sbjct: 70 IYAPISGEVIAVNEALEDSPELVNSSAYGEGWFFRVMPS 108
>sp|A6WSL2|GCSH_SHEB8 Glycine cleavage system H protein OS=Shewanella baltica (strain
OS185) GN=gcvH PE=3 SV=1
Length = 129
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK 157
+ + G ++ VN L P L+NSSA EG+ +MP
Sbjct: 70 IYAPISGEVIAVNEALEDSPELVNSSAYGEGWFFRVMPS 108
>sp|B8EB46|GCSH_SHEB2 Glycine cleavage system H protein OS=Shewanella baltica (strain
OS223) GN=gcvH PE=3 SV=1
Length = 129
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK 157
+ + G ++ VN L P L+NSSA EG+ +MP
Sbjct: 70 IYAPISGEVIAVNEALEDSPELVNSSAYGEGWFFRVMPS 108
>sp|Q72LB0|GCSH_THET2 Glycine cleavage system H protein OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=gcvH PE=3 SV=1
Length = 128
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 38/95 (40%)
Query: 63 THVAFKDEGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCC 122
TH EG V D G V + + + E AV V + + +
Sbjct: 12 THEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAP 71
Query: 123 VKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK 157
V G ++EVN L K P L+N EG+I + P+
Sbjct: 72 VAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPR 106
>sp|A3D084|GCSH_SHEB5 Glycine cleavage system H protein OS=Shewanella baltica (strain
OS155 / ATCC BAA-1091) GN=gcvH PE=3 SV=1
Length = 129
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 119 VRCCVKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPK 157
+ + G ++ VN L P L+NSSA EG+ +MP
Sbjct: 70 IYAPISGEVIAVNEALEDSPELVNSSAYGEGWFFRVMPS 108
>sp|A1UTQ4|GCSH_BARBK Glycine cleavage system H protein OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=gcvH PE=3 SV=1
Length = 122
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 102 ESNTAVCKVCTNNDSYIVRCCVKGSLLEVNNRLIKQPGLLNSSADREGYI 151
+S V V +D Y + G ++E+N L P L+N A++EG++
Sbjct: 51 DSAAVVESVKAASDVY---SPIDGEVVEINEALADDPALVNKKAEKEGWL 97
>sp|P64212|GCSH_BRUSU Glycine cleavage system H protein OS=Brucella suis biovar 1 (strain
1330) GN=gcvH PE=3 SV=1
Length = 125
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 70 EGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLE 129
E G+ V + ++ G V + + + V V + + V V G ++E
Sbjct: 19 ENGVATVGITIHAQEQLGDLVFVELPEVGRTVAKGDGVVVVESVKAASDVYAPVDGEVVE 78
Query: 130 VNNRLIKQPGLLNSSADREGYI 151
VN+ + P L+N +A+ EG++
Sbjct: 79 VNDAVASDPSLINQAAEGEGWL 100
>sp|P64211|GCSH_BRUME Glycine cleavage system H protein OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=gcvH PE=3 SV=1
Length = 125
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 70 EGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLE 129
E G+ V + ++ G V + + + V V + + V V G ++E
Sbjct: 19 ENGVATVGITIHAQEQLGDLVFVELPEVGRTVAKGDGVVVVESVKAASDVYAPVDGEVVE 78
Query: 130 VNNRLIKQPGLLNSSADREGYI 151
VN+ + P L+N +A+ EG++
Sbjct: 79 VNDAVASDPSLINQAAEGEGWL 100
>sp|Q2YKY0|GCSH_BRUA2 Glycine cleavage system H protein OS=Brucella abortus (strain 2308)
GN=gcvH PE=3 SV=1
Length = 125
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 70 EGGITAVDFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCVKGSLLE 129
E G+ V + ++ G V + + + V V + + V V G ++E
Sbjct: 19 ENGVATVGITIHAQEQLGDLVFVELPEVGRTVAKGDGVVVVESVKAASDVYAPVDGEVVE 78
Query: 130 VNNRLIKQPGLLNSSADREGYI 151
VN+ + P L+N +A+ EG++
Sbjct: 79 VNDAVASDPSLINQAAEGEGWL 100
>sp|A6LGR3|GCSH_PARD8 Glycine cleavage system H protein OS=Parabacteroides distasonis
(strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gcvH PE=3
SV=1
Length = 126
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 123 VKGSLLEVNNRLIKQPGLLNSSADREGYIAIIMPKPADWLKIKSSLLGLEDYKR 176
V G +LEVN L P L+N A +G++ I A L+ LL EDY++
Sbjct: 72 VSGEVLEVNAELEDAPELVNEDAYGKGWLIKISLTDASELE---ELLSAEDYQK 122
>sp|Q9LFW0|FB257_ARATH Putative F-box protein At5g15660 OS=Arabidopsis thaliana
GN=At5g15660 PE=4 SV=1
Length = 438
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 39 FLKPGHDQYVYRHANGLCVIGLAPTHVAFKDEGG 72
F P H++Y Y H NGL +G + G
Sbjct: 113 FTYPRHEEYYYHHVNGLISVGYGTDQIVINPTTG 146
>sp|Q12012|YO289_YEAST Uncharacterized protein YOR289W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YOR289W PE=1 SV=1
Length = 251
Score = 30.0 bits (66), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 8/47 (17%)
Query: 77 DFNVGKSDRSGFKVTGKRKKNAQHFESNTAVCKVCTNNDSYIVRCCV 123
DF + ++++ +T K+K N H + TN ++YI+R C+
Sbjct: 58 DFKIDYNEKTSLFITWKKKSNKHH--------TIDTNEENYILRGCI 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,023,370
Number of Sequences: 539616
Number of extensions: 3206037
Number of successful extensions: 6770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 6713
Number of HSP's gapped (non-prelim): 63
length of query: 185
length of database: 191,569,459
effective HSP length: 110
effective length of query: 75
effective length of database: 132,211,699
effective search space: 9915877425
effective search space used: 9915877425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)