Query 029961
Match_columns 185
No_of_seqs 112 out of 435
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:52:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kcm_A PITP alpha, phosphatidy 91.1 0.77 2.6E-05 38.2 7.7 77 40-119 38-118 (270)
2 2qim_A PR10.2B; trans-zeatin, 83.4 12 0.0004 27.8 12.5 118 3-139 4-124 (158)
3 1icx_A Protein LLR18A, LLPR10. 82.0 13 0.00045 27.4 12.0 118 2-138 2-122 (155)
4 1tw0_A Pathogenesis-related cl 81.9 14 0.00046 27.5 16.4 118 2-138 2-122 (157)
5 1e09_A PRU AV 1; allergen, maj 76.6 21 0.0007 26.4 14.0 116 2-138 2-123 (159)
6 2i9y_A Major latex protein-lik 76.2 22 0.00075 26.6 11.6 119 1-138 15-137 (166)
7 2vq5_A S-norcoclaurine synthas 56.0 70 0.0024 24.9 13.5 116 1-138 27-149 (201)
8 3qsz_A STAR-related lipid tran 50.2 74 0.0025 23.4 15.9 138 3-162 27-173 (189)
9 1ln1_A PC-TP, phosphatidylchol 48.8 82 0.0028 23.6 16.9 143 3-164 52-205 (214)
10 2flh_A Cytokinin-specific bind 46.0 85 0.0029 22.9 13.0 111 1-136 1-121 (155)
11 2vjg_A Major allergen DAU C 1; 45.7 87 0.003 23.0 14.1 116 2-139 3-124 (154)
12 1t17_A Conserved hypothetical 40.7 91 0.0031 21.8 19.0 144 2-176 1-145 (148)
13 3k3k_A Abscisic acid receptor 36.6 77 0.0026 25.0 6.0 84 8-108 55-141 (211)
14 4a8u_A Major pollen allergen B 34.1 1.4E+02 0.0047 22.0 14.1 117 2-139 2-124 (159)
15 2ffs_A Hypothetical protein PA 30.7 1E+02 0.0036 23.1 5.7 44 76-133 42-85 (157)
16 3p0l_A Steroidogenic acute reg 28.2 1.9E+02 0.0066 21.8 12.0 120 3-140 55-187 (221)
17 2job_A Antilipopolysaccharide 23.9 81 0.0028 22.2 3.6 33 122-159 55-87 (102)
18 3ie5_A Phenolic oxidative coup 22.2 2.4E+02 0.0083 20.9 12.6 115 3-139 10-130 (165)
19 3f1i_H Hepatocyte growth facto 22.2 65 0.0022 22.5 2.8 24 144-168 7-30 (98)
20 2ffs_A Hypothetical protein PA 21.2 2E+02 0.0068 21.5 5.7 56 16-93 23-78 (157)
21 1g0y_I Antagonist peptide AF10 20.2 57 0.002 16.8 1.6 19 12-30 3-21 (26)
No 1
>1kcm_A PITP alpha, phosphatidylinositol transfer protein alpha; phospholipid binding protein, phospholipid transport, binding protein; 2.00A {Mus musculus} SCOP: d.129.3.4 PDB: 1t27_A* 1uw5_A* 2a1l_A*
Probab=91.08 E-value=0.77 Score=38.25 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=50.5
Q ss_pred EeeeeEeE-EeCCCC--eEEEEEEEeeccCChhHHHHhhCCceEEEEEEEEEeCCCCeEEEEEEeecc-cceEEEEEEEE
Q 029961 40 EVDTLNHK-LDPLSG--KLYTTRALTVHAPGPWFVRKIIGQDICHCVESTVVDAQSKSMQLTTRNVSL-KKYIEVEEKIR 115 (185)
Q Consensus 40 s~Dvl~r~-vd~~~g--~L~t~Rli~~~~~~P~w~~kl~g~~~~~~~E~s~vD~~~r~m~~~s~Nls~-~~~~~v~E~~~ 115 (185)
+|.||.-+ .+.++| --+|++++.....+|+|++.++....+++.|+++-- ---+.+++|.+. + .++.-..|+ .
T Consensus 38 GVEvl~Nepy~~~~g~~GqYT~Kiyhl~sklP~wi~~~~P~~al~v~EkaWNa-yPy~~T~yt~~~-~~~kF~i~IET-~ 114 (270)
T 1kcm_A 38 GVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNA-YPYCRTVITNEY-MKEDFLIKIET-W 114 (270)
T ss_dssp TEEEEEEEEEECTTSCEEEEEEEEEECGGGSCHHHHTTSCTTTTEEEEEEEEE-TTEEEEEEEETT-TGGGEEEEEEE-E
T ss_pred eEEEEeccccccCCCCccceEEEEEEccccChHHHHHhCCccceEEEeehhcc-CcceeeEecCCC-cCcceEEEEEE-E
Confidence 46666642 321122 368999999999999999999988788899998743 223344455432 3 356566675 5
Q ss_pred EeeC
Q 029961 116 YEPH 119 (185)
Q Consensus 116 Y~~~ 119 (185)
|.|+
T Consensus 115 h~~d 118 (270)
T 1kcm_A 115 HKPD 118 (270)
T ss_dssp EESS
T ss_pred EcCC
Confidence 5554
No 2
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=83.39 E-value=12 Score=27.79 Aligned_cols=118 Identities=10% Similarity=0.042 Sum_probs=73.7
Q ss_pred eEEEeeEEeeCChHHHHHHHhccCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCceEEE
Q 029961 3 KAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDICHC 82 (185)
Q Consensus 3 k~~~~~~~y~~pwe~V~~A~w~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~~~~ 82 (185)
..++.+...+.|-+.|-.++-..++|-..+ ++++|.++++++- |...|.+ |.++... |....++
T Consensus 4 ~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk-~~~~i~s~~i~eG--dgg~Gsi---r~~~~~~----------g~~~~~~ 67 (158)
T 2qim_A 4 FTFQDEYTSTIAPAKLYKALVTDADIIIPK-AVETIQSVEIVEG--NGGPGTI---KKLTFIE----------GGESKYV 67 (158)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHH-HCTTEEEEEEEES--SSSTTCE---EEEEEEE----------TTEEEEE
T ss_pred EEEEEEEEecCCHHHHHHHHhcCccchhhh-HHhhCcEEEEEec--CCCCCeE---EEEEEcC----------CCcceeE
Confidence 567889999999999999885466642111 2368889999886 3223443 3333221 3344567
Q ss_pred EEEEE-EeCCCCeEEEEEEeecc-c-ceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEec
Q 029961 83 VESTV-VDAQSKSMQLTTRNVSL-K-KYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKP 139 (185)
Q Consensus 83 ~E~s~-vD~~~r~m~~~s~Nls~-~-~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~~ 139 (185)
.|+-. +|..+++++-.-.-=+. . ++=+..=+....|.+++ .|.++-.+.....+
T Consensus 68 kErl~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~---gs~v~wt~~y~~~~ 124 (158)
T 2qim_A 68 LHKIEAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANG---GSIGKVTIKIETKG 124 (158)
T ss_dssp EEEEEEEEGGGTEEEEEEEEESSCCCSEEEEEEEEEEEECSTT---CEEEEEEEEEEEST
T ss_pred EEEEEEEecCCCEEEEEEEeccCCccceEEEEEEEEEEecCCC---CEEEEEEEEEEECC
Confidence 88887 99999987655432222 1 23344445566676542 38888877777543
No 3
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=81.96 E-value=13 Score=27.40 Aligned_cols=118 Identities=10% Similarity=0.108 Sum_probs=73.4
Q ss_pred ceEEEeeEEeeCChHHHHHHHhccCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCceEE
Q 029961 2 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDICH 81 (185)
Q Consensus 2 vk~~~~~~~y~~pwe~V~~A~w~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~~~ 81 (185)
|..++.+...+.|-+.|-.++-..|+|-..+ ++++|.++++++- |...|.+ |.++... |....+
T Consensus 2 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk-~~~~i~s~~i~eG--~g~~Gsi---r~~~~~~----------G~~~~~ 65 (155)
T 1icx_A 2 IFAFENEQSSTVAPAKLYKALTKDSDEIVPK-VIEPIQSVEIVEG--NGGPGTI---KKIIAIH----------DGHTSF 65 (155)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHH-HSTTEEEEEEEES--SSSTTCE---EEEEEES----------SSSEEE
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCcchhcch-hhhhccEEEEEec--CCCCCeE---EEEEEec----------CCccee
Confidence 4567889999999999999985466642111 3368899999886 3223443 3333321 344456
Q ss_pred EEEEEE-EeCCCCeEEEEEEeeccc--ceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEe
Q 029961 82 CVESTV-VDAQSKSMQLTTRNVSLK--KYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIK 138 (185)
Q Consensus 82 ~~E~s~-vD~~~r~m~~~s~Nls~~--~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~ 138 (185)
+.|+-. +|..+++++-.-.-=+.- ++=+..=+....|.+++ .|.++-.+.....
T Consensus 66 ~kErl~~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~---gs~v~w~~~y~~~ 122 (155)
T 1icx_A 66 VLHKLDAIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDG---GSIGKINVKFHTK 122 (155)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEETTSCTTEEEEEEEEEEEECGGG---CEEEEEEEEEEES
T ss_pred EEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEecCCC---CEEEEEEEEEEEC
Confidence 778877 999999876554322221 23344445556675542 3888877777754
No 4
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=81.91 E-value=14 Score=27.46 Aligned_cols=118 Identities=8% Similarity=0.072 Sum_probs=75.0
Q ss_pred ceEEEeeEEeeCChHHHHHHHhccCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCceEE
Q 029961 2 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDICH 81 (185)
Q Consensus 2 vk~~~~~~~y~~pwe~V~~A~w~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~~~ 81 (185)
|..++.+...+.|-+.|-.++-..++|-..+ ++++|.++++++- |...|.+ |.++... |....+
T Consensus 2 ~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk-~~~~i~s~~i~eG--~g~~Gsi---r~~~~~~----------G~~~~~ 65 (157)
T 1tw0_A 2 VFVFRDETSSSVAPAKLYKALTKDSDTIAQK-IDGPIQSIELVEG--NGGVGTI---KKITANE----------GDKTSF 65 (157)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHHTGGGGGGG-SCSSEEEEEEEES--SSSTTCE---EEEEEEE----------TTEEEE
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCcchhhhh-HHhhccEEEEEeC--CCCCCeE---EEEEeeC----------CCccce
Confidence 4567889999999999999985477653222 3478899999886 3223443 3333221 334456
Q ss_pred EEEEEE-EeCCCCeEEEEEEeeccc--ceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEe
Q 029961 82 CVESTV-VDAQSKSMQLTTRNVSLK--KYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIK 138 (185)
Q Consensus 82 ~~E~s~-vD~~~r~m~~~s~Nls~~--~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~ 138 (185)
+.|+-. +|..+++++-.-.-=+.- ++=+..=+....|.+++ .|.++-.+.....
T Consensus 66 ~kErl~~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~---gs~v~w~~~y~~~ 122 (157)
T 1tw0_A 66 VLQKVDAIDEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGG---GSISKVTLKFHTK 122 (157)
T ss_dssp EEEEEEEEETTTTEEEEEEEECTTSCTTEEEEEEEEEEEECSSS---SEEEEEEEEEEES
T ss_pred EEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEecCCC---CEEEEEEEEEEEC
Confidence 778887 999999876554332221 24344445566676542 3888877777754
No 5
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=76.58 E-value=21 Score=26.45 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=71.7
Q ss_pred ceEEEeeEEeeCChHHHHHHHhccCCC--CCCCCCCc-ceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCc
Q 029961 2 VKAYTQEHIYKHPWERVTSASWRKFAD--PENKRTLS-HILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQD 78 (185)
Q Consensus 2 vk~~~~~~~y~~pwe~V~~A~w~KYPn--p~~~~~~~-hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~ 78 (185)
|..++.+...+.|-+.|-.++-..++| |. ++| +|.++++++- |...|.+ |.++... |..
T Consensus 2 ~~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk---~~P~~i~s~~~~eG--dgg~Gsv---r~~~~~~----------G~~ 63 (159)
T 1e09_A 2 VFTYESEFTSEIPPPRLFKAFVLDADNLVPK---IAPQAIKHSEILEG--DGGPGTI---KKITFGE----------GSQ 63 (159)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHH---HCTTTEEEEEEEES--SSSTTCE---EEEEECC----------SSS
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCccccchh---hChhhccEEEEEeC--CCCCceE---EEEEecC----------CCC
Confidence 456788999999999999987546664 32 345 6789999886 3223443 4333322 223
Q ss_pred eEEEEEEEE-EeCCCCeEEEEEEeeccc--ceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEe
Q 029961 79 ICHCVESTV-VDAQSKSMQLTTRNVSLK--KYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIK 138 (185)
Q Consensus 79 ~~~~~E~s~-vD~~~r~m~~~s~Nls~~--~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~ 138 (185)
..++.|+-. +|..+++++-.-.-=++. .+-+..=+....|.++ +.|.++-.+.....
T Consensus 64 ~~~~kErl~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~---~gs~v~wt~~y~~~ 123 (159)
T 1e09_A 64 YGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPS---GGSIIKSTSHYHTK 123 (159)
T ss_dssp CEEEEEEEEEEETTTTEEEEEECCCTTTGGGEEEEEEEEEECCCTT---SSEEEEEEEEEEEC
T ss_pred ceEEEEEEEEEcCCCCEEEEEEEecccCcccceEEEEEEEEEecCC---CCEEEEEEEEEEEC
Confidence 356778887 999999877655322221 2223333344455433 24888877777754
No 6
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=76.21 E-value=22 Score=26.60 Aligned_cols=119 Identities=10% Similarity=0.061 Sum_probs=71.0
Q ss_pred CceEEEeeEEeeCChHHHHHHHhccCCCCCCCCCCc-ceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCce
Q 029961 1 MVKAYTQEHIYKHPWERVTSASWRKFADPENKRTLS-HILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDI 79 (185)
Q Consensus 1 Mvk~~~~~~~y~~pwe~V~~A~w~KYPnp~~~~~~~-hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~ 79 (185)
|+...+.+-..+.|-+.|-.+|-. .++-. |.++| .|.++++++-.-+ ..|. .|.++... |...
T Consensus 15 ~~~k~~~ev~i~apa~kvw~~~~~-d~~~l-pk~~P~~i~s~~~~eGd~g-g~Gs---ir~~~~~~----------gg~~ 78 (166)
T 2i9y_A 15 LVGKLETDVEIKASADKFHHMFAG-KPHHV-SKASPGNIQGCDLHEGDWG-TVGS---IVFWNYVH----------DGEA 78 (166)
T ss_dssp SEEEEEEEEEESSCHHHHHGGGSS-CSSCC-CCSCSSCCSSCCCCSCCSC-STTC---CCEEEEEE----------TTEE
T ss_pred CccEEEEEEEecCCHHHHHHHHhc-ccccc-cccccccceEEEEEcCCCC-CCCe---EEEEEEec----------CCCc
Confidence 456678889999999999998743 33433 22557 6778888875211 1233 23333221 3345
Q ss_pred EEEEEEEE-EeCCCCeEEEEEE--eecccceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEe
Q 029961 80 CHCVESTV-VDAQSKSMQLTTR--NVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIK 138 (185)
Q Consensus 80 ~~~~E~s~-vD~~~r~m~~~s~--Nls~~~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~ 138 (185)
.++.|+.. +|..++++.-.-. ++ ...+=+..=+....|.++. +.|.++-.+.+...
T Consensus 79 ~~~kErl~~iD~~~~~~~y~iieGd~-~~~~~~~~~ti~v~p~~~g--~gs~v~wt~~ye~~ 137 (166)
T 2i9y_A 79 KVAKERIEAVEPDKNLITFRVIEGDL-MKEYKSFLLTIQVTPKPGG--PGSIVHWHLEYEKI 137 (166)
T ss_dssp EEEEEEEEEEETTTTEEEEEECCTTG-GGTEEEEEEEEEEEEEEET--TEEEEEEEEEEEES
T ss_pred eEEEEEEEEEeccCcEEEEEEEeCCC-CCCeeEEEEEEEEEECCCC--CCcEEEEEEEEEEC
Confidence 67888888 9999998765442 33 2223334444555665443 24888777777643
No 7
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=55.96 E-value=70 Score=24.91 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=68.8
Q ss_pred CceEEEeeEEeeCChHHHHHHHhc-cCCC--CCCCCCCcce-eEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhC
Q 029961 1 MVKAYTQEHIYKHPWERVTSASWR-KFAD--PENKRTLSHI-LEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG 76 (185)
Q Consensus 1 Mvk~~~~~~~y~~pwe~V~~A~w~-KYPn--p~~~~~~~hV-~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g 76 (185)
|...++.+...+-|=+.|..+|-+ .+++ |. +.|++ .+++++ - |..-| |.|.++... |
T Consensus 27 ~~g~~~~eveI~apa~kvW~~~v~~df~~l~pk---~~P~~i~s~e~~-G--dGg~G---sIR~lt~~~----------G 87 (201)
T 2vq5_A 27 VTKVIHHELEVAASADDIWTVYSWPGLAKHLPD---LLPGAFEKLEII-G--DGGVG---TILDMTFVP----------G 87 (201)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHTCGGGGGGHHH---HSTTSCSEEEEE-S--SSSTT---CEEEEECCT----------T
T ss_pred cceEEEEEEEecCCHHHHHhhhhcCCcccchhh---hCcccceEEEEe-c--CCCCC---eEEEEEecC----------C
Confidence 345677788889999999999877 7876 43 35654 577876 3 21223 334443321 3
Q ss_pred CceEEEEEEEE-EeCCCCeEEEEEEeecc--cceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEe
Q 029961 77 QDICHCVESTV-VDAQSKSMQLTTRNVSL--KKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIK 138 (185)
Q Consensus 77 ~~~~~~~E~s~-vD~~~r~m~~~s~Nls~--~~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~ 138 (185)
....++.|+-. +|..+++++-.-.-=+. ..+-...=++...|.++ +.+.++-.+.+...
T Consensus 88 ~~~~~vkErle~iDde~~~~sYsiieGd~l~~~~~~y~~tikv~p~~d---ggs~vkWt~~ye~~ 149 (201)
T 2vq5_A 88 EFPHEYKEKFILVDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGK---DSCVIKSSTEYHVK 149 (201)
T ss_dssp CSSCEEEEEEEEEETTTTEEEEEEEEEGGGGTTEEEEEEEEEEEEEET---TEEEEEEEEEEEEC
T ss_pred CcccEEEEEEEEEchhhCEEEEEEEecCccccceeEEEEEEEEEECCC---CCeEEEEEEEEEEC
Confidence 33357778877 99999987655432221 12333333444455443 24777777776644
No 8
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=50.21 E-value=74 Score=23.44 Aligned_cols=138 Identities=9% Similarity=0.081 Sum_probs=72.5
Q ss_pred eEEEeeEEeeCChHHHHHHHh--ccCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCceE
Q 029961 3 KAYTQEHIYKHPWERVTSASW--RKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDIC 80 (185)
Q Consensus 3 k~~~~~~~y~~pwe~V~~A~w--~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~~ 80 (185)
+.|..+.++++|-+.+...++ ..||.= .+.+.+..+|++ + ++. .++......|. . + .+.-
T Consensus 27 ~~~k~~~~v~~s~~~v~~~l~D~~~~~~W-----~~~~~~~~vle~--~--~~~----~i~y~~~~~p~-p---~-~~RD 88 (189)
T 3qsz_A 27 REFRGEVRLKAAADDVVKVLRDANAFRQW-----MPDVAASELLKA--T--DTE----QYHYLDNSAPW-P---V-SNRD 88 (189)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGGGGGT-----STTEEEEEEEEE--C--SSE----EEEEEEECCSS-S---C-CCEE
T ss_pred EEEEEEEEEECCHHHHHHHHHhHHHhhhH-----HHhcCEEEEEee--c--CCc----eEEEEEeecCC-C---c-CCcc
Confidence 467788899999999998874 355543 368899999998 5 332 22233334552 1 2 2333
Q ss_pred EEEEEEEEeCCCCeEEEEEEeecc------cceEEEEE-EEEEeeCCCCCCCceEEEEEEEEEEecccchHHHHHHHHHH
Q 029961 81 HCVESTVVDAQSKSMQLTTRNVSL------KKYIEVEE-KIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVELR 153 (185)
Q Consensus 81 ~~~E~s~vD~~~r~m~~~s~Nls~------~~~~~v~E-~~~Y~~~penp~~~T~~~q~a~i~i~~~~~~~~~~~~iE~~ 153 (185)
|+.-.+..+..++.+.+.... .+ .+++.+.- .+.|.-.| ++ +.|.++-.+.++.+|.. ..++.+.+-+-
T Consensus 89 ~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~-~~t~vt~~~~~dp~G~i-P~~lvn~~~~~ 164 (189)
T 3qsz_A 89 GVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DA-DGVDVTYQMHASPGGSI-PSWLANQTVVE 164 (189)
T ss_dssp EEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CS-SSEEEEEEEEECSCSSS-CHHHHHHTTTH
T ss_pred eEEEEEEEECCCCeEEEEEEc-CCCccCCCCCeEEeeEeeEEEEEEE-CC-CeEEEEEEEEeCCCCCC-CHHHHHHHHHH
Confidence 444444444333455443332 33 33333322 24453333 33 35888887777754421 13444444333
Q ss_pred HHHHHHHHH
Q 029961 154 CAEKFMQNS 162 (185)
Q Consensus 154 ~~~rf~~na 162 (185)
.+-.|.++.
T Consensus 165 ~~~~~l~~L 173 (189)
T 3qsz_A 165 TPFGTLKAL 173 (189)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 9
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=48.84 E-value=82 Score=23.59 Aligned_cols=143 Identities=9% Similarity=-0.003 Sum_probs=75.1
Q ss_pred eEEEeeEEe-eCChHHHHHHHhc--cCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCce
Q 029961 3 KAYTQEHIY-KHPWERVTSASWR--KFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDI 79 (185)
Q Consensus 3 k~~~~~~~y-~~pwe~V~~A~w~--KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~ 79 (185)
..|..+.++ +.|-+.|...++. .+|. ..+++.+.++|+. +|. .++.....+|.- +-+.+.
T Consensus 52 ~~~k~~~~i~~~~~~~v~~~l~d~~~r~~-----Wd~~~~~~~vle~-----~~~----~i~~~~~~~p~p---~~~RD~ 114 (214)
T 1ln1_A 52 YEYKVFGVLEDCSPTLLADIYMDSDYRKQ-----WDQYVKELYEQEC-----NGE----TVVYWEVKYPFP---MSNRDY 114 (214)
T ss_dssp EEEEEEEEETTSCHHHHHHHHHCHHHHHH-----HCTTEEEEEEEEE-----TTE----EEEEEEECCCTT---SCCEEE
T ss_pred EEEEEEEEECCCCHHHHHHHHcCHHHHHH-----HHHHHhhEEEecc-----CCC----EEEEEEEEcCCC---CCCceE
Confidence 467778899 5999999988873 2232 2246778888865 342 234444445532 223355
Q ss_pred EEEEEEEEEeCCCCe-EEEEEEeecc------cceEEEE-EEEEEeeCCCCCCCceEEEEEEEEEEecccchHHHHHHHH
Q 029961 80 CHCVESTVVDAQSKS-MQLTTRNVSL------KKYIEVE-EKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVE 151 (185)
Q Consensus 80 ~~~~E~s~vD~~~r~-m~~~s~Nls~------~~~~~v~-E~~~Y~~~penp~~~T~~~q~a~i~i~~~~~~~~~~~~iE 151 (185)
++......+|...+. ..+-++.+++ .+++.+. -.+.|.-.|.++ +.|.++..+.++.+|... .++.+.+-
T Consensus 115 v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~-~~t~v~~~~~~Dp~G~iP-~~l~n~~~ 192 (214)
T 1ln1_A 115 VYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK-KGSKVFMYYFDNPGGQIP-SWLINWAA 192 (214)
T ss_dssp EEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS-SSEEEEEEEEECCSSCCC-HHHHHHHH
T ss_pred EEEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCC-CceEEEEEEEECCCCccc-HHHHHHHH
Confidence 554433344445443 3444555554 4445444 222233333444 359998888887654221 33444443
Q ss_pred HHHHHHHHHHHHH
Q 029961 152 LRCAEKFMQNSVK 164 (185)
Q Consensus 152 ~~~~~rf~~na~k 164 (185)
+-.+..|-++..|
T Consensus 193 ~~~~~~~l~~l~k 205 (214)
T 1ln1_A 193 KNGVPNFLKDMAR 205 (214)
T ss_dssp HTHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHH
Confidence 3333344443333
No 10
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=45.97 E-value=85 Score=22.94 Aligned_cols=111 Identities=16% Similarity=0.191 Sum_probs=68.1
Q ss_pred CceEEEeeEEeeCChHHHHHHHhccCCC--CCCCCCCcc-eeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhC-
Q 029961 1 MVKAYTQEHIYKHPWERVTSASWRKFAD--PENKRTLSH-ILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG- 76 (185)
Q Consensus 1 Mvk~~~~~~~y~~pwe~V~~A~w~KYPn--p~~~~~~~h-V~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g- 76 (185)
|...++.+...+-|=+.|-.+|-+.|.| |. +.|+ +.++++++-. ..-|. .|.++... |
T Consensus 1 M~~~~~~e~~i~a~a~kvw~~~v~d~~~l~pk---~~P~~i~s~~~~eGd--gg~Gs---vr~~~~~~----------g~ 62 (155)
T 2flh_A 1 MVKEFNTQTELSVRLEALWAVLSKDFITVVPK---VLPHIVKDVQLIEGD--GGVGT---ILIFNFLP----------EV 62 (155)
T ss_dssp CCEEEEEEEEESSCHHHHHHHHHTSCTTHHHH---HCTTTEEEEEEEECS--SSTTC---EEEEEECT----------TS
T ss_pred CCcEEEEEEEecCCHHHHHHHHhcccccccch---hccccceEEEEEcCC--CCCCe---EEEEEeeC----------CC
Confidence 5556788999999999999998888887 53 3554 4677887752 12243 34443322 3
Q ss_pred CceEEEEEEEE-EeCCCCeEEEEEE--ee---cccceEEEEEEEEEeeCCCCCCCceEEEEEEEEE
Q 029961 77 QDICHCVESTV-VDAQSKSMQLTTR--NV---SLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIR 136 (185)
Q Consensus 77 ~~~~~~~E~s~-vD~~~r~m~~~s~--Nl---s~~~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~ 136 (185)
.. .++.|+-. +|..++.++-.-. +. .+.++. =+....|.++ +.|.++-.+.+.
T Consensus 63 ~~-~~~kErl~~iD~~~~~~~y~iieg~~l~~~~~~~~---~~i~v~p~~~---ggs~v~wt~~y~ 121 (155)
T 2flh_A 63 SP-SYQREEITEFDESSHEIGLQVIEGGYLSQGLSYYK---TTFKLSEIEE---DKTLVNVKISYD 121 (155)
T ss_dssp SS-CEEEEEEEEEETTTTEEEEEEEEEGGGGTTCSEEE---EEEEEEEEET---TEEEEEEEEEEE
T ss_pred CC-cEEEEEEEEEeCCCCEEEEEEEeccccccCceEEE---EEEEEEECCC---CCEEEEEEEEEE
Confidence 23 57778877 9999998654432 22 233433 2333445433 347777666665
No 11
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=45.73 E-value=87 Score=23.00 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=72.0
Q ss_pred ceEEEeeEEeeCChHHHHHHHhccCCC--CCCCCCCc-ceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCc
Q 029961 2 VKAYTQEHIYKHPWERVTSASWRKFAD--PENKRTLS-HILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQD 78 (185)
Q Consensus 2 vk~~~~~~~y~~pwe~V~~A~w~KYPn--p~~~~~~~-hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~ 78 (185)
+-.++.+...+-|=+.|..+|++.|.| |. +.| +|.++++ +-. . .-|. .|.++... |.+
T Consensus 3 ~~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk---~~P~~v~s~e~-eGd-g-~~Gs---ir~~~~~~----------g~~ 63 (154)
T 2vjg_A 3 AQSHSLEITSSVSAEKIFSGIVLDVDTVIPK---AATGAYKSVEV-KGD-G-GAGT---VRIITLPE----------GSP 63 (154)
T ss_dssp CCEEEEEEEESSCHHHHHHHHTTTHHHHHHH---HSTTTCSEEEE-ESS-S-STTC---EEEEECCT----------TCS
T ss_pred ceEEEEEEEecCCHHHHHHhhhCCccccchh---hccCceeEEEE-eCC-C-CCce---EEEEEecC----------CCC
Confidence 346788999999999999999999866 33 345 4678887 642 1 1243 34444332 233
Q ss_pred eEEEEEEEE-EeCCCCeEEEEEEeeccc--ceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEec
Q 029961 79 ICHCVESTV-VDAQSKSMQLTTRNVSLK--KYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKP 139 (185)
Q Consensus 79 ~~~~~E~s~-vD~~~r~m~~~s~Nls~~--~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~~ 139 (185)
..++.|+-. +|..++.+.-.-.--+.- .+=+..=+....|.++ +.+.++-.+...-.+
T Consensus 64 ~~~~kErl~~iD~~~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~---ggs~v~wt~~y~~~~ 124 (154)
T 2vjg_A 64 ITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTAD---GGSITKTTAIFHTKG 124 (154)
T ss_dssp CCEEEEEEEEEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTT---SCEEEEEEEEEEEST
T ss_pred ceEEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEECCC---CcEEEEEEEEEEECC
Confidence 457788866 999888765443322221 1333334555667654 248888888877543
No 12
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=40.69 E-value=91 Score=21.78 Aligned_cols=144 Identities=14% Similarity=0.101 Sum_probs=77.8
Q ss_pred ceEEEeeEEeeCChHHHHHHHhccCCCCCCCCCCcceeEeeeeEeEEeCCCC-eEEEEEEEeeccCChhHHHHhhCCceE
Q 029961 2 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSG-KLYTTRALTVHAPGPWFVRKIIGQDIC 80 (185)
Q Consensus 2 vk~~~~~~~y~~pwe~V~~A~w~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g-~L~t~Rli~~~~~~P~w~~kl~g~~~~ 80 (185)
|..++.+...++|-++|-... .-+.+= +.++|++.++.++++.=+ +| .-..-++.. .+.|....
T Consensus 1 M~~~~~s~~i~ap~~~v~~~v-~D~~~~--p~~~p~~~~~~v~~~~~~--~g~~~~~~~~~~----------~~~~~~~~ 65 (148)
T 1t17_A 1 MHRHVVTKVLPYTPDQLFELV-GDVDAY--PKFVPWITGMRTWNGRVD--GAVSTVDAEAQV----------GFSFLREK 65 (148)
T ss_dssp CCEEEEEEEESSCTHHHHHHH-TTTTCC--SSCCSSCCCCCEEEEEEE--TTEEEEEEEEEC----------STTSSCCE
T ss_pred CCEEEEEEEecCCHHHHHHHH-HHHhhH--HhhCCCcCeeEEEEecCC--CCCceEEEEEEE----------EecceeEE
Confidence 456788889999999887654 444331 114678889999987533 32 322222211 11244555
Q ss_pred EEEEEEEEeCCCCeEEEEEEeecccceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEecccchHHHHHHHHHHHHHHHHH
Q 029961 81 HCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVELRCAEKFMQ 160 (185)
Q Consensus 81 ~~~E~s~vD~~~r~m~~~s~Nls~~~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~~~~~~~~~~~~iE~~~~~rf~~ 160 (185)
|..+.. .||.++.+......=.|.. ..=.-++.|.++ + |.++-+..++.. +++ +...+..-|.+
T Consensus 66 ~~~~v~-~~~~~~~i~~~~~~G~f~~---~~g~w~f~~~~~---g-t~v~~~~~~~~~--~~l------~~~l~~~~~~~ 129 (148)
T 1t17_A 66 FATRVR-RDKDARSIDVSLLYGPFKR---LNNGWRFMPEGD---A-TRVEFVIEFAFK--SAL------LDAMLAANVDR 129 (148)
T ss_dssp EEEEEE-EETTTCEEEEEESSTTSSC---EEEEEEEEEETT---E-EEEEEEEEECCS--CHH------HHHHHHHHHHH
T ss_pred EEEEEE-EcCCCcEEEEEECCCChhc---cEEEEEEEECCC---C-eEEEEEEEEEEC--cHH------HHHHHHHHHHH
Confidence 665555 5887767776654422322 233556677544 4 877766666643 222 11122233445
Q ss_pred HHHHHHHHHHHHHHHH
Q 029961 161 NSVKGREVMERICKYL 176 (185)
Q Consensus 161 na~kgr~~~e~vl~~l 176 (185)
.+.+-.++++.-++++
T Consensus 130 ~~~~~~~~f~~r~~~~ 145 (148)
T 1t17_A 130 AAGKLIACFEARAQQL 145 (148)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555544443
No 13
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=36.56 E-value=77 Score=24.97 Aligned_cols=84 Identities=19% Similarity=0.207 Sum_probs=49.6
Q ss_pred eEEeeCChHHHHHHHhccCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCceEEEEEE-E
Q 029961 8 EHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDICHCVES-T 86 (185)
Q Consensus 8 ~~~y~~pwe~V~~A~w~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~~~~~E~-s 86 (185)
....+.|-+.|...+ +.|-++.. +.|.|.++.+++-. +|..=+.|.++....+| ..++.|+ -
T Consensus 55 ~~~I~ApadkVW~lv-~dF~~l~~--w~p~V~s~e~~eGd----~g~vGsVR~lt~~~G~p----------~~~vkErL~ 117 (211)
T 3k3k_A 55 AQRIHAPPELVWSIV-RRFDKPQT--YKHFIKSCSVEQNF----EMRVGCTRDVIVISGLP----------ANTSTERLD 117 (211)
T ss_dssp EEEESSCHHHHHHHH-TCTTCGGG--TCSSEEEEECCTTC----CCCTTCEEEEEESSSSS----------CEEEEEEEE
T ss_pred EEEEcCCHHHHHHHH-hCcCChhH--cCccceEEEEecCC----CCCCCcEEEEEecCCCc----------cceEEEEEE
Confidence 457899999999974 88887632 45677777665421 11222345554443333 2456666 4
Q ss_pred EEeCCCCeEEEE--EEeecccceE
Q 029961 87 VVDAQSKSMQLT--TRNVSLKKYI 108 (185)
Q Consensus 87 ~vD~~~r~m~~~--s~Nls~~~~~ 108 (185)
.+|..++.+.-. --++-+.+|.
T Consensus 118 ~lDd~~~~~sYsIieg~lpv~~Y~ 141 (211)
T 3k3k_A 118 ILDDERRVTGFSIIGGEHRLTNYK 141 (211)
T ss_dssp EEETTTTEEEEEEEEETTGGGTCE
T ss_pred EEeccCCEEEEEEeecCcceeEEE
Confidence 588888875433 3445566654
No 14
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=34.12 E-value=1.4e+02 Score=21.95 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=71.6
Q ss_pred ceEEEeeEEeeCChHHHHHHHhccCCC--CCCCCCCc-ceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCc
Q 029961 2 VKAYTQEHIYKHPWERVTSASWRKFAD--PENKRTLS-HILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQD 78 (185)
Q Consensus 2 vk~~~~~~~y~~pwe~V~~A~w~KYPn--p~~~~~~~-hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~ 78 (185)
|..|+.+...+-|=+.|..++-+.|.+ |. +.| +|.++++++-. -.-|. .|.++... |.+
T Consensus 2 ~~~~~~ei~i~a~a~kvw~~~~~d~~~l~pk---~~P~~i~s~e~~eGd--gg~Gs---ir~~~~~~----------g~~ 63 (159)
T 4a8u_A 2 VFNYETEATSVIPAARLFKAFILDGDNLFPK---VAPQAISSVENIEGN--GGPGT---IKKISFPE----------GFP 63 (159)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTTTHHHHHHH---HCTTTCCEEEEEECS--SSTTC---EEEEECCT----------TSS
T ss_pred cEEEEEEEEecCCHHHHHHHHhcCccccchh---hCchhccEEEEEcCC--CCCce---EEEEEEec----------CCC
Confidence 456888999999999999998677765 32 344 46788888752 11243 34444433 223
Q ss_pred eEEEEEEEE-EeCCCCeEEEEEEeeccc--ceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEec
Q 029961 79 ICHCVESTV-VDAQSKSMQLTTRNVSLK--KYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKP 139 (185)
Q Consensus 79 ~~~~~E~s~-vD~~~r~m~~~s~Nls~~--~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~~ 139 (185)
..++.|+-. +|..++++.-.-.--+.. .+-+..=+....|.++ +.+.++-.+...-.+
T Consensus 64 ~~~~kErl~~iD~~~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~---ggs~v~wt~~y~~~~ 124 (159)
T 4a8u_A 64 FKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPN---GGSILKINNKYHTKG 124 (159)
T ss_dssp CSEEEEEEEEEETTTTEEEEEEEEETTCBTTEEEEEEEEEEEECTT---SCEEEEEEEEEEESS
T ss_pred ccEEEEEEEEEccccCEEEEEEeeCCCCccceEEEEEEEEEEECCC---CceEEEEEEEEEECC
Confidence 346777765 999999876543322221 1333333455566554 348888888877543
No 15
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=30.73 E-value=1e+02 Score=23.14 Aligned_cols=44 Identities=11% Similarity=0.093 Sum_probs=31.7
Q ss_pred CCceEEEEEEEEEeCCCCeEEEEEEeecccceEEEEEEEEEeeCCCCCCCceEEEEEE
Q 029961 76 GQDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQET 133 (185)
Q Consensus 76 g~~~~~~~E~s~vD~~~r~m~~~s~Nls~~~~~~v~E~~~Y~~~penp~~~T~~~q~a 133 (185)
|.+.|-+++++ |. .-+|.+.|... .+.|+|++.|. .+..|.+.+
T Consensus 42 ~i~~c~Vlse~--~~------~~~R~l~fg~~-~i~e~vtl~~~-----~~v~f~~~~ 85 (157)
T 2ffs_A 42 GLERFEILVDD--GD------RLHRRLYLPGL-VVEDEVVLKAP-----DSAHYSIKP 85 (157)
T ss_dssp TCCEEEEEEEC--SS------EEEEEEEETTE-EEEEEEEEETT-----TEEEEEECC
T ss_pred ccCeEEEEecC--CC------eEEEEEEECCC-ccceEEEEcCC-----cEEEEEccc
Confidence 55778888886 21 45588888888 88899998873 356666655
No 16
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=28.25 E-value=1.9e+02 Score=21.80 Aligned_cols=120 Identities=16% Similarity=0.145 Sum_probs=67.0
Q ss_pred eEEEeeEEeeCChHHHHHHHhc---cCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhh-CCc
Q 029961 3 KAYTQEHIYKHPWERVTSASWR---KFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKII-GQD 78 (185)
Q Consensus 3 k~~~~~~~y~~pwe~V~~A~w~---KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~-g~~ 78 (185)
+.|..+.+++.|=+.|...++. ..|. .-+++...++|++ +|..+.+.|. . ....|.| ++ +.+
T Consensus 55 ~~~k~~~~v~~~~~~v~~~l~~d~~~r~~-----Wd~~~~~~~vle~-~~~~t~I~y~---~--~~~~~~~---~v~~RD 120 (221)
T 3p0l_A 55 KVFRLEVVVDQPMERLYEELVERMEAMGE-----WNPNVKEIKVLQK-IGKDTFITHE---L--AAEAAGN---LVGPRD 120 (221)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTGGGTTT-----SCTTCSEEEEEEE-CSSSEEEEEE---E--ECC---C---CSCCEE
T ss_pred eEEEEEEEEcCCHHHHHHHHHhccchhhh-----cCcchheEEEEEe-cCCCeEEEEE---e--eccccCC---ccCCce
Confidence 5677788889999999999872 2332 2357889999997 5532222221 1 1222222 23 335
Q ss_pred eEEEEEEEEEeCCCCeEEEEEEeeccc------ceEEEEEE---EEEeeCCCCCCCceEEEEEEEEEEecc
Q 029961 79 ICHCVESTVVDAQSKSMQLTTRNVSLK------KYIEVEEK---IRYEPHPDNPTGWTVCRQETSIRIKPL 140 (185)
Q Consensus 79 ~~~~~E~s~vD~~~r~m~~~s~Nls~~------~~~~v~E~---~~Y~~~penp~~~T~~~q~a~i~i~~~ 140 (185)
.+++.-... + .+...+.++.+.+. +++.++-. ...+|.+++|+ .|.++.-..++.+|.
T Consensus 121 fv~~r~~~~-~--~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~-~t~vt~~~~~Dp~G~ 187 (221)
T 3p0l_A 121 FVSVRCAKR-R--GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPS-KTKLTWLLSIDLKGW 187 (221)
T ss_dssp EEEEEEEEE-C--SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEE-EEEEEEEECEECCSS
T ss_pred EEEEEEEEE-c--CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCC-cEEEEEEEEecCCCC
Confidence 555433322 2 34455544445543 45555433 24567776663 688888777776653
No 17
>2job_A Antilipopolysaccharide factor; ALF, lipid A binding protein, endotoxin, lipid binding protein; NMR {Penaeus monodon}
Probab=23.89 E-value=81 Score=22.18 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=20.3
Q ss_pred CCCCceEEEEEEEEEEecccchHHHHHHHHHHHHHHHH
Q 029961 122 NPTGWTVCRQETSIRIKPLSALASMAEKVELRCAEKFM 159 (185)
Q Consensus 122 np~~~T~~~q~a~i~i~~~~~~~~~~~~iE~~~~~rf~ 159 (185)
.| +||.++-++.-++. .+.+.+.+++|..+-|.
T Consensus 55 CP-gWT~i~Ges~TrSr----sgvv~~a~rDFV~KA~~ 87 (102)
T 2job_A 55 CP-GWTAIRGEASTRSQ----SGVAGKTAKDFVRKAFQ 87 (102)
T ss_dssp CB-TTBSCEEEEEESCH----HHHHHHHHHHHHHHHHH
T ss_pred cC-Cccceecccccccc----cchhhhHHHHHHHHHHH
Confidence 56 69998888877633 22355666665544443
No 18
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=22.25 E-value=2.4e+02 Score=20.86 Aligned_cols=115 Identities=12% Similarity=0.048 Sum_probs=68.7
Q ss_pred eEEEeeEEeeCChHHHHHHHhccCCC--CCCCCCCc-ceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCce
Q 029961 3 KAYTQEHIYKHPWERVTSASWRKFAD--PENKRTLS-HILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDI 79 (185)
Q Consensus 3 k~~~~~~~y~~pwe~V~~A~w~KYPn--p~~~~~~~-hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~ 79 (185)
..++.+...+-|=+.|..+|-+.|.+ |. +.| +|.++++++-. . .-|. .|.++... |...
T Consensus 10 ~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk---~~P~~v~s~e~~eGd-g-~~Gs---ir~~~~~~----------g~~~ 71 (165)
T 3ie5_A 10 YTIVKEEESPIAPHRLFKALVLERHQVLVK---AQPHVFKSGEIIEGD-G-GVGT---VTKITFVD----------GHPL 71 (165)
T ss_dssp EEEEEEEEESSCHHHHHHHHTTTHHHHHHH---HCTTTEEEEEEEESS-S-STTC---EEEEEECT----------TSSC
T ss_pred EEEEEEEEecCCHHHHHHHhcCCccccchh---hCCcccceEEEecCC-C-CCCe---EEEEEecC----------CCCC
Confidence 45777889999999999998777755 32 345 47888887752 1 2343 34444432 2334
Q ss_pred EEEEEEEE-EeCCCCeEEEEEEeecc--cceEEEEEEEEEeeCCCCCCCceEEEEEEEEEEec
Q 029961 80 CHCVESTV-VDAQSKSMQLTTRNVSL--KKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKP 139 (185)
Q Consensus 80 ~~~~E~s~-vD~~~r~m~~~s~Nls~--~~~~~v~E~~~Y~~~penp~~~T~~~q~a~i~i~~ 139 (185)
.++.|+-. +|..+++++-.-.-=+. ..+-...=++...+ .+ +.+.++-.+.....+
T Consensus 72 ~~~kErl~~iD~~~~~~~Y~iieG~~l~~~~~~y~~~i~v~~--~~--ggs~vkwt~~y~~~~ 130 (165)
T 3ie5_A 72 TYMLHKFDEIDAANFYCKYTLFEGDVLRDNIEKVVYEVKLEA--VG--GGSKGKITVTYHPKP 130 (165)
T ss_dssp CEEEEEEEEEEGGGTEEEEEEEEEGGGTTTEEEEEEEEEEEE--ET--TEEEEEEEEEEEECT
T ss_pred ceEEEEEEEEchhcCEEEEEEecCCCCccceEEEEEEEEEEe--CC--CceEEEEEEEEEECC
Confidence 57788866 99999987655432221 11222222233332 22 358888888777544
No 19
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=22.21 E-value=65 Score=22.51 Aligned_cols=24 Identities=17% Similarity=0.440 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 029961 144 ASMAEKVELRCAEKFMQNSVKGREV 168 (185)
Q Consensus 144 ~~~~~~iE~~~~~rf~~na~kgr~~ 168 (185)
..+...+|= +++|.++|+.+||.+
T Consensus 7 ~~l~~sv~i-f~NRmksn~~RGrsi 30 (98)
T 3f1i_H 7 KALQNAVTT-FVNRMKSNHMRGRSI 30 (98)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHTCCG
T ss_pred HHHHHHHHH-HHHHHHHHHhCCCCC
Confidence 346777766 489999999999873
No 20
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=21.21 E-value=2e+02 Score=21.54 Aligned_cols=56 Identities=11% Similarity=0.087 Sum_probs=39.2
Q ss_pred HHHHHHHhccCCCCCCCCCCcceeEeeeeEeEEeCCCCeEEEEEEEeeccCChhHHHHhhCCceEEEEEEEEEeCCCC
Q 029961 16 ERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDICHCVESTVVDAQSK 93 (185)
Q Consensus 16 e~V~~A~w~KYPnp~~~~~~~hV~s~Dvl~r~vd~~~g~L~t~Rli~~~~~~P~w~~kl~g~~~~~~~E~s~vD~~~r 93 (185)
+++..|.-+|.=+|.. +.|++-+++|+++. ++ ..+|-+...+ .-+.|..+.+|..+
T Consensus 23 ~QlW~GL~~kar~p~~--Fvp~i~~c~Vlse~----~~--~~~R~l~fg~--------------~~i~e~vtl~~~~~ 78 (157)
T 2ffs_A 23 LQLWEGLVCRAREPQY--FVVGLERFEILVDD----GD--RLHRRLYLPG--------------LVVEDEVVLKAPDS 78 (157)
T ss_dssp HHHHHHHHHHHHCGGG--TCTTCCEEEEEEEC----SS--EEEEEEEETT--------------EEEEEEEEEETTTE
T ss_pred HHHHHHHHHHhcChhh--cccccCeEEEEecC----CC--eEEEEEEECC--------------CccceEEEEcCCcE
Confidence 5788888888877765 67899999999985 23 3335444333 14558888888776
No 21
>1g0y_I Antagonist peptide AF10847; immunoglobulin, immune system; 3.00A {Homo sapiens} SCOP: k.19.1.1
Probab=20.20 E-value=57 Score=16.80 Aligned_cols=19 Identities=26% Similarity=0.658 Sum_probs=16.0
Q ss_pred eCChHHHHHHHhccCCCCC
Q 029961 12 KHPWERVTSASWRKFADPE 30 (185)
Q Consensus 12 ~~pwe~V~~A~w~KYPnp~ 30 (185)
+|.||.--.-||+-|.-|.
T Consensus 3 pftweesnayywqpyalpl 21 (26)
T 1g0y_I 3 PFTWEESNAYYWQPYALPL 21 (26)
T ss_dssp CCCHHHHHHHEECTTCCCC
T ss_pred ccceecccceeeccccccc
Confidence 5789999999999887664
Done!