Query 029962
Match_columns 184
No_of_seqs 143 out of 1320
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 09:54:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.1E-50 3.7E-55 317.5 16.3 149 1-151 1-153 (169)
2 4gpr_A Ubiquitin-conjugating e 100.0 3E-48 1E-52 298.6 18.6 144 4-149 5-151 (151)
3 2aak_A UBC1, ubiquitin conjuga 100.0 3.1E-48 1.1E-52 298.7 18.3 147 1-149 1-151 (152)
4 2c2v_B Ubiquitin-conjugating e 100.0 1.3E-48 4.3E-53 301.6 15.5 148 1-150 2-153 (154)
5 2bep_A Ubiquitin-conjugating e 100.0 4.6E-48 1.6E-52 299.8 17.8 148 1-149 5-159 (159)
6 3k9o_A Ubiquitin-conjugating e 100.0 9.3E-48 3.2E-52 308.4 18.1 150 1-151 2-158 (201)
7 1zdn_A Ubiquitin-conjugating e 100.0 5.8E-48 2E-52 299.0 16.3 142 4-147 14-158 (158)
8 2r0j_A Ubiquitin carrier prote 100.0 1.1E-47 3.9E-52 294.7 16.3 144 4-149 2-148 (149)
9 1z2u_A Ubiquitin-conjugating e 100.0 2.4E-47 8.1E-52 293.2 17.9 143 4-148 5-150 (150)
10 1jat_A Ubiquitin-conjugating e 100.0 6.8E-48 2.3E-52 297.7 14.8 148 2-151 4-154 (155)
11 2ayv_A Ubiquitin-conjugating e 100.0 3.5E-47 1.2E-51 296.9 18.6 142 4-147 22-166 (166)
12 1fxt_A Ubiquitin-conjugating e 100.0 7.4E-48 2.5E-52 295.7 14.5 144 4-148 2-149 (149)
13 2ucz_A UBC7, ubiquitin conjuga 100.0 2E-47 6.7E-52 297.9 17.1 146 1-148 1-164 (165)
14 2onu_A Ubiquitin-conjugating e 100.0 2E-48 6.9E-53 299.9 10.4 148 3-150 2-149 (152)
15 2e2c_A Ubiquitin conjugating e 100.0 3.5E-47 1.2E-51 294.0 17.2 143 4-149 10-155 (156)
16 2gjd_A Ubiquitin-conjugating e 100.0 4E-47 1.4E-51 294.0 17.5 146 1-148 1-157 (157)
17 2c4o_A Ubiquitin-conjugating e 100.0 5.6E-47 1.9E-51 295.4 18.2 143 4-148 20-165 (165)
18 2pwq_A Ubiquitin conjugating e 100.0 2.6E-47 9E-52 308.5 16.9 149 4-153 24-175 (216)
19 1yh2_A HSPC150 protein similar 100.0 8.3E-47 2.8E-51 295.5 18.7 146 4-151 5-157 (169)
20 3h8k_A Ubiquitin-conjugating e 100.0 1.5E-46 5.1E-51 292.6 18.5 143 4-148 4-163 (164)
21 3rcz_B SUMO-conjugating enzyme 100.0 1.3E-46 4.5E-51 292.8 17.7 143 4-148 11-163 (163)
22 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.1E-46 3.8E-51 300.2 17.5 144 4-148 33-192 (193)
23 3bzh_A Ubiquitin-conjugating e 100.0 9.1E-47 3.1E-51 301.0 16.9 143 4-148 49-194 (194)
24 2grr_A Ubiquitin-conjugating e 100.0 1.6E-46 5.6E-51 291.7 16.9 147 1-149 4-161 (161)
25 3e46_A Ubiquitin-conjugating e 100.0 2.2E-46 7.5E-51 309.3 18.0 150 1-151 54-210 (253)
26 1i7k_A Ubiquitin-conjugating e 100.0 1.9E-46 6.4E-51 295.8 15.8 148 1-151 27-178 (179)
27 2z5d_A Ubiquitin-conjugating e 100.0 3.2E-47 1.1E-51 300.1 11.3 150 1-151 20-172 (179)
28 1tte_A Ubiquitin-conjugating e 100.0 1.9E-46 6.6E-51 303.3 13.4 150 2-152 1-154 (215)
29 1wzv_A Ubiquitin-conjugating e 100.0 6.4E-46 2.2E-50 286.6 15.7 144 4-150 5-153 (155)
30 1yrv_A Ubiquitin-conjugating l 100.0 1E-45 3.5E-50 289.3 14.5 143 1-145 20-168 (169)
31 3fn1_B NEDD8-conjugating enzym 100.0 4E-45 1.4E-49 285.3 16.8 142 4-148 15-167 (167)
32 3rz3_A Ubiquitin-conjugating e 100.0 4.6E-45 1.6E-49 288.9 16.3 146 1-148 3-173 (183)
33 2y9m_A Ubiquitin-conjugating e 100.0 6.8E-45 2.3E-49 285.4 16.6 147 1-148 3-168 (172)
34 1y8x_A Ubiquitin-conjugating e 100.0 1.1E-44 3.9E-49 281.1 16.7 142 1-145 4-147 (160)
35 1yf9_A Ubiquitin carrier prote 100.0 4E-45 1.4E-49 286.4 13.9 146 4-150 13-158 (171)
36 2nvu_C NEDD8-conjugating enzym 100.0 8.6E-44 3E-48 280.9 16.2 139 4-145 27-167 (180)
37 1c4z_D UBCH7, ubiquitin conjug 100.0 1.2E-44 4.2E-49 279.2 10.7 144 4-150 3-151 (154)
38 2awf_A Ubiquitin-conjugating e 100.0 4E-44 1.4E-48 281.0 13.6 137 4-142 18-172 (172)
39 3o2u_A NEDD8-conjugating enzym 100.0 4.6E-43 1.6E-47 278.9 15.1 142 2-146 28-177 (190)
40 4ddg_A Ubiquitin-conjugating e 100.0 6.1E-43 2.1E-47 305.7 17.1 146 3-150 3-151 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 7.7E-43 2.6E-47 272.5 12.8 140 1-141 5-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 2.5E-39 8.5E-44 274.5 14.1 151 4-156 77-251 (323)
43 2fo3_A Ubiquitin-conjugating e 100.0 4.2E-39 1.4E-43 240.4 12.2 115 1-117 4-122 (125)
44 2h2y_A Ubiquitin-conjugating e 100.0 5.3E-38 1.8E-42 237.6 14.0 114 1-116 18-135 (136)
45 2q0v_A Ubiquitin-conjugating e 100.0 8.8E-39 3E-43 247.0 9.3 125 4-131 22-156 (156)
46 1jat_B Ubiquitin-conjugating e 100.0 2.4E-39 8.4E-44 245.4 6.0 126 1-128 2-138 (138)
47 2a4d_A Ubiquitin-conjugating e 100.0 9.3E-38 3.2E-42 242.0 11.6 121 4-125 26-156 (160)
48 2a7l_A Hypothetical ubiquitin- 100.0 2.7E-37 9.3E-42 233.7 10.8 110 1-112 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 3.4E-37 1.2E-41 241.1 8.6 121 4-125 36-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.1E-34 3.8E-39 230.0 14.7 141 4-148 15-171 (187)
51 1zuo_A Hypothetical protein LO 100.0 1.6E-36 5.3E-41 240.5 1.9 137 1-147 24-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.6E-26 5.5E-31 177.9 1.3 97 5-105 34-145 (172)
53 3r3q_A Suppressor protein STP2 99.7 3.5E-18 1.2E-22 132.1 8.3 110 6-118 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 7.6E-18 2.6E-22 127.1 -0.5 86 5-97 36-132 (168)
55 3obq_A Tumor susceptibility ge 99.4 4.8E-13 1.6E-17 101.6 6.7 78 27-112 51-137 (146)
56 2ebm_A RWD domain-containing p 96.6 0.0069 2.4E-07 43.8 7.0 68 1-70 8-78 (128)
57 2yz0_A Serine/threonine-protei 95.0 0.092 3.1E-06 38.2 7.5 41 29-70 45-85 (138)
58 2day_A Ring finger protein 25; 94.2 0.31 1E-05 34.8 8.5 65 6-70 11-82 (128)
59 2ebk_A RWD domain-containing p 94.0 0.21 7.2E-06 35.8 7.3 64 5-69 9-78 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 93.0 0.39 1.3E-05 34.6 7.4 66 3-69 10-85 (137)
61 3zqs_A E3 ubiquitin-protein li 91.4 1.6 5.4E-05 33.8 9.3 77 7-105 5-81 (186)
62 2daw_A RWD domain containing p 88.1 0.67 2.3E-05 34.4 4.8 23 48-70 76-98 (154)
63 2dax_A Protein C21ORF6; RWD do 86.2 0.58 2E-05 34.6 3.4 24 47-70 73-96 (152)
64 2cwb_A Chimera of immunoglobul 78.5 0.46 1.6E-05 33.6 0.2 43 111-153 18-60 (108)
65 3rls_A YAF9, protein AF-9 homo 30.2 1.2E+02 0.0039 23.0 5.8 45 27-73 30-74 (175)
66 3qrl_A Transcription initiatio 25.7 1.5E+02 0.0051 21.5 5.5 43 29-73 32-77 (140)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-50 Score=317.53 Aligned_cols=149 Identities=29% Similarity=0.625 Sum_probs=142.6
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
|++ |.+||++|++++ ++.|+.+.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 887 899999999987 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 77 VDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
|+. +|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+...
T Consensus 81 I~~-~G~ICl~iL~~~WsP~~~i~~vL~s-i~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~~ 153 (169)
T 1ayz_A 81 VYA-NGEICLDILQNRWTPTYDVASILTS-IQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDM 153 (169)
T ss_dssp BCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCC-CCeEeehhhccCCCCcCcHHHHHHH-HHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCCc
Confidence 995 9999999999999999999999998 999999999999999999999999999999999999999998643
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=3e-48 Score=298.56 Aligned_cols=144 Identities=32% Similarity=0.738 Sum_probs=140.0
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
|.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+ .
T Consensus 5 a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~ 83 (151)
T 4gpr_A 5 AMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNIN-K 83 (151)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceEC-C
Confidence 789999999887 778999999999999999999999999999999999999999999999999999999999999 4
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKP 149 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~ 149 (184)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLS-ISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHH-HHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999999974
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.1e-48 Score=298.71 Aligned_cols=147 Identities=29% Similarity=0.663 Sum_probs=141.7
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
|++ +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 887 899999999887 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCC
Q 029962 77 VDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKP 149 (184)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~ 149 (184)
|+. +|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+.
T Consensus 81 v~~-~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 81 IYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp BCT-TSBBCCGGGTTSCCTTCCHHHHHHH-HHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCC-CCEEechhhcCCCCCCCcHHHHHHH-HHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 995 9999999999999999999999998 9999999999999999999999999999999999999999974
No 4
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-48 Score=301.58 Aligned_cols=148 Identities=31% Similarity=0.604 Sum_probs=139.8
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
||. +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 555 789999999887 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCC
Q 029962 77 VDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPE 150 (184)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~ 150 (184)
|+ .+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+..
T Consensus 82 v~-~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~~ 153 (154)
T 2c2v_B 82 VD-KLGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNN 153 (154)
T ss_dssp BC-TTCBBCCHHHHTSCCTTCCHHHHHHH-HHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred Cc-cCCeEEchhccCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCC
Confidence 99 58999999999999999999999998 99999999999999999999999999999999999999999853
No 5
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.6e-48 Score=299.82 Aligned_cols=148 Identities=26% Similarity=0.661 Sum_probs=141.6
Q ss_pred CCC-hHHHHHHHHHhc------CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccc
Q 029962 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIY 73 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l------~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (184)
|++ +.+||++|+++| ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 776 899999999887 3679999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCC
Q 029962 74 HPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKP 149 (184)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~ 149 (184)
||||+..+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 99999558999999999999999999999998 9999999999999999999999999999999999999999974
No 6
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=9.3e-48 Score=308.40 Aligned_cols=150 Identities=25% Similarity=0.645 Sum_probs=142.1
Q ss_pred CCC-hHHHHHHHHHhc------CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccc
Q 029962 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIY 73 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l------~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (184)
||+ |.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 887 899999999987 2579999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 74 HPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
||||+..+|.||+++|.++|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++..
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 158 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 158 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHH-HHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99999559999999999999999999999998 999999999999999999999999999999999999999999753
No 7
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-48 Score=299.00 Aligned_cols=142 Identities=26% Similarity=0.542 Sum_probs=138.0
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 92 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGA- 92 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCC-
Confidence 679999999987 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYA 147 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a 147 (184)
+|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+||++||
T Consensus 93 ~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 93 NGEICVNVLKRDWTAELGIRHVLLT-IKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp TSBBCHHHHTTTCCTTCCHHHHHHH-HHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCEEehhhcCCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999998 99999999999999999999999999999999999999997
No 8
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.1e-47 Score=294.73 Aligned_cols=144 Identities=29% Similarity=0.659 Sum_probs=139.0
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 80 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK- 80 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC-
Confidence 358999999887 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKP 149 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~ 149 (184)
+|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++
T Consensus 81 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 81 LGRICLDILKDKWSPALQIRTVLLS-IQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp TCBBCCGGGTTTCCTTSCHHHHHHH-HHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEechhcCCCCCCCCcHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 8999999999999999999999998 9999999999999999999999999999999999999999985
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.4e-47 Score=293.18 Aligned_cols=143 Identities=36% Similarity=0.729 Sum_probs=138.8
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 83 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 83 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC-
Confidence 789999999887 7789999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHH-HHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998 999999999999999999999999999999999999999985
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=6.8e-48 Score=297.74 Aligned_cols=148 Identities=34% Similarity=0.682 Sum_probs=141.7
Q ss_pred CChHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 029962 2 SSPSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVD 78 (184)
Q Consensus 2 ssa~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 78 (184)
+.+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 34789999999887 778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 79 ELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
.+|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+.+.
T Consensus 84 -~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~~~ 154 (155)
T 1jat_A 84 -RLGRICLDVLKTNWSPALQIRTVLLS-IQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKKP 154 (155)
T ss_dssp -TTCCBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEECC
T ss_pred -CCCEEEchhhccCCCCCCCHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccCC
Confidence 69999999999999999999999998 999999999999999999999999999999999999999998653
No 11
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-47 Score=296.85 Aligned_cols=142 Identities=37% Similarity=0.755 Sum_probs=138.2
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+ .
T Consensus 22 ~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~-~ 100 (166)
T 2ayv_A 22 ALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNIN-S 100 (166)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCC-C
Confidence 789999999987 778999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYA 147 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a 147 (184)
+|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLS-ISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHH-HHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998 99999999999999999999999999999999999999997
No 12
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=7.4e-48 Score=295.72 Aligned_cols=144 Identities=30% Similarity=0.692 Sum_probs=138.5
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMIND-GMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~-n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
+.+||++|++++ +++|+++.+.++ |+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 469999999887 678999999887 9999999999999999999999999999999999999999999999999995
Q ss_pred CCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 80 LSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
.+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALIS-LQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHH-HHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 59999999999999999999999998 999999999999999999999999999999999999999985
No 13
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2e-47 Score=297.87 Aligned_cols=146 Identities=25% Similarity=0.472 Sum_probs=138.9
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEecc-CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHP 75 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~-~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 75 (184)
|++ |.+||++|+++| ++.|+++.+.+ +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 888 899999999887 77899999976 6999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeEEcccc-------------CCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 029962 76 NVDELSGSVCLDVI-------------NQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEF 142 (184)
Q Consensus 76 nV~~~~G~icl~~l-------------~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~ 142 (184)
||+. +|.||+++| .+.|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|
T Consensus 81 Nv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~ 158 (165)
T 2ucz_A 81 NIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLS-VMSMLSEPNIESGANIDACILWRDNRPEFERQVKLS 158 (165)
T ss_dssp TBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHH-HHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9995 899999999 6899999999999998 999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 029962 143 CEKYAK 148 (184)
Q Consensus 143 ~~k~a~ 148 (184)
+++++.
T Consensus 159 ~~~~~~ 164 (165)
T 2ucz_A 159 ILKSLG 164 (165)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 999975
No 14
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2e-48 Score=299.89 Aligned_cols=148 Identities=58% Similarity=1.120 Sum_probs=141.1
Q ss_pred ChHHHHHHHHHhcCCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCCCC
Q 029962 3 SPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSG 82 (184)
Q Consensus 3 sa~~Rl~kEl~~l~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G 82 (184)
+|.+||++|++++...|++|.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+..+|
T Consensus 2 sa~~Rl~kEl~~l~~~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G 81 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMAGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASG 81 (152)
T ss_dssp -CCCHHHHTHHHHHHHTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTC
T ss_pred hHHHHHHHHHHhcCcCCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCC
Confidence 57899999999997779999999999999999999999999999999999999999999999999999999999995589
Q ss_pred eEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCC
Q 029962 83 SVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPE 150 (184)
Q Consensus 83 ~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~ 150 (184)
.||+++|.+.|+|+++|.+||.++|++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++.
T Consensus 82 ~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~ 149 (152)
T 2onu_A 82 SVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKD 149 (152)
T ss_dssp BBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGG
T ss_pred eEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999988679999999999999999999999999999999999999999864
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-47 Score=294.05 Aligned_cols=143 Identities=31% Similarity=0.602 Sum_probs=138.2
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 88 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ- 88 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc-
Confidence 789999999987 6889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKP 149 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~ 149 (184)
+|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++| +|+++|.++||+|+++|+..
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~s-i~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLS-LQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CceEECccccccCCCCCcHHHHHHH-HHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999998 9999999999999999999999 89999999999999999864
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4e-47 Score=294.02 Aligned_cols=146 Identities=31% Similarity=0.569 Sum_probs=137.9
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEecc-----CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-----DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNK 71 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~-----~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (184)
||+ +.+||++|++++ ++.|+++.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 887 899999999887 77899999875 389999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCeEEccccCC--ccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 72 IYHPNVDELSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 72 i~HPnV~~~~G~icl~~l~~--~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
+|||||+ .+|.||+++|.. +|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 81 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLG-VQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999 599999999987 79999999999998 999999999999999999999999999999999999999985
No 17
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=5.6e-47 Score=295.44 Aligned_cols=143 Identities=36% Similarity=0.725 Sum_probs=138.8
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+.
T Consensus 20 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~- 98 (165)
T 2c4o_A 20 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 98 (165)
T ss_dssp HHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC-
Confidence 789999999987 6789999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~s-i~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHH-HHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998 999999999999999999999999999999999999999985
No 18
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.6e-47 Score=308.54 Aligned_cols=149 Identities=26% Similarity=0.596 Sum_probs=141.6
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ +++|+++.+.++|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+..
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 789999999887 67899999999999999999999999999999999999999999999999999999999999955
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCCCC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPEDIG 153 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~~~ 153 (184)
+|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+++...
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~s-I~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~~ 175 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLS-IQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKEE 175 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC---
T ss_pred CCEEEchhhcccCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCccc
Confidence 8999999999999999999999998 99999999999999999999999999999999999999999987654
No 19
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.3e-47 Score=295.49 Aligned_cols=146 Identities=29% Similarity=0.617 Sum_probs=140.6
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+ .
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~-~ 83 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNID-S 83 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCC-c
Confidence 789999999987 678999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCeEEccccC----CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 81 SGSVCLDVIN----QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 81 ~G~icl~~l~----~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
+|.||+++|. +.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+.+.
T Consensus 84 ~G~iCl~iL~~~~~~~W~p~~~i~~vL~s-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~~ 157 (169)
T 1yh2_A 84 AGRICLDVLKLPPKGAWRPSLNIATVLTS-IQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQ 157 (169)
T ss_dssp TCBBCCGGGSCTTTSCCCTTSCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCeEecccccCCcccCCCCCCcHHHHHHH-HHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccccc
Confidence 9999999998 899999999999998 999999999999999999999999999999999999999999755
No 20
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.5e-46 Score=292.57 Aligned_cols=143 Identities=22% Similarity=0.453 Sum_probs=137.6
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMIND-GMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~-n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
|.+||++|++++ ++.|+++.+.++ |+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~- 82 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY- 82 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC-
Confidence 899999999887 778999999876 999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEccccC-------------CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 029962 80 LSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKY 146 (184)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~ 146 (184)
.+|.||+++|. +.|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|++++
T Consensus 83 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~-i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 83 PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLS-VVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHH-HHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHH-HHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 59999999997 789999999999998 9999999999999999999999999999999999999998
Q ss_pred cC
Q 029962 147 AK 148 (184)
Q Consensus 147 a~ 148 (184)
+.
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 75
No 21
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-46 Score=292.78 Aligned_cols=143 Identities=25% Similarity=0.542 Sum_probs=137.5
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccC-----CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccc
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMIND-----GMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHP 75 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~-----n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 75 (184)
|.+||++|++++ ++.|+++.+.++ |+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 899999999887 788999999876 999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeEEccccCC--ccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 76 NVDELSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 76 nV~~~~G~icl~~l~~--~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
||+ .+|.||+++|.. +|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||.
T Consensus 91 nV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~-i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 91 NVY-PSGTVCLSILNEEEGWKPAITIKQILLG-IQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp TBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCC-CCCcEeccccCCCCCcCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999 599999999975 49999999999998 999999999999999999999999999999999999999984
No 22
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-46 Score=300.24 Aligned_cols=144 Identities=27% Similarity=0.637 Sum_probs=137.0
Q ss_pred hHHHHHHHHHhc---CC-------------CCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeee
Q 029962 4 PSKRREMDLMKL---MM-------------SDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIG 67 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~-------------~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~ 67 (184)
+.+||++|++++ ++ .|+.+.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+
T Consensus 33 a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 112 (193)
T 2f4z_A 33 EQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMK 112 (193)
T ss_dssp HHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEE
Confidence 679999999987 33 69999999999999999999999999999999999999999999999999
Q ss_pred EecccccccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 029962 68 FVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYA 147 (184)
Q Consensus 68 f~t~i~HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a 147 (184)
|.|+||||||+..+|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 113 F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 113 FVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLS-IQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 99999999999558999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred C
Q 029962 148 K 148 (184)
Q Consensus 148 ~ 148 (184)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 6
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=9.1e-47 Score=301.03 Aligned_cols=143 Identities=30% Similarity=0.624 Sum_probs=138.8
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|+++| ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+.
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~- 127 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS- 127 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC-
Confidence 689999999987 6789999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 81 ~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
+|.||+++|.+.|+|+++|.+||++ |+.||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLS-ICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCceechhhhccCCCcCcHHHHHHH-HHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999998 999999999999999999999999999999999999999985
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.6e-46 Score=291.70 Aligned_cols=147 Identities=26% Similarity=0.515 Sum_probs=139.0
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEecc-----CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-----DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNK 71 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~-----~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (184)
|++ +.+||++|++++ ++.|+.+.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 776 889999999887 67899998874 589999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCeEEccccCC--ccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCC
Q 029962 72 IYHPNVDELSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKP 149 (184)
Q Consensus 72 i~HPnV~~~~G~icl~~l~~--~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~ 149 (184)
+|||||+ .+|.||+++|.. +|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+.
T Consensus 84 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLG-IQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999 599999999986 89999999999998 9999999999999999999999999999999999999999963
No 25
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.2e-46 Score=309.33 Aligned_cols=150 Identities=25% Similarity=0.645 Sum_probs=143.2
Q ss_pred CCC-hHHHHHHHHHhc------CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccc
Q 029962 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIY 73 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l------~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (184)
|++ |.+||++||++| ++.|+++.+.++|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 666 899999999987 3579999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 74 HPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
||||+..+|.||+++|.++|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||++..
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~s-I~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~ 210 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 210 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHH-HHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99999558999999999999999999999998 999999999999999999999999999999999999999999754
No 26
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-46 Score=295.81 Aligned_cols=148 Identities=28% Similarity=0.552 Sum_probs=138.2
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
|++ +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++||||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 344 789999999987 7889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 77 VDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
|+. +|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+|+++| +|+++|.++||++++++++.+.
T Consensus 107 V~~-~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~~ 178 (179)
T 1i7k_A 107 VDT-QGNISLDILKEKWSALYDVRTILLS-IQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQE 178 (179)
T ss_dssp BCT-TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC---
T ss_pred ccc-CCeEEcccCcCcCCCCCCHHHHHHH-HHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcccC
Confidence 995 9999999999999999999999998 9999999999999999999999 9999999999999999998763
No 27
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-47 Score=300.05 Aligned_cols=150 Identities=58% Similarity=1.110 Sum_probs=140.0
Q ss_pred CCC---hHHHHHHHHHhcCCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccc
Q 029962 1 MSS---PSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNV 77 (184)
Q Consensus 1 Mss---a~~Rl~kEl~~l~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 77 (184)
|++ +.+||++|++++...|+++.+. +|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV 98 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIESKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNI 98 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHHSSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred CCCchHHHHHHHHHHHhcCcCCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcC
Confidence 554 6899999999997789999987 578999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCC
Q 029962 78 DELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPED 151 (184)
Q Consensus 78 ~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~ 151 (184)
+..+|.||+++|.+.|+|+++|.+||+++|++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+...
T Consensus 99 ~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~~~ 172 (179)
T 2z5d_A 99 DEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEA 172 (179)
T ss_dssp CTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSHHH
T ss_pred CCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccch
Confidence 95599999999999999999999999877999999999999999999999999999999999999999998643
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.9e-46 Score=303.28 Aligned_cols=150 Identities=30% Similarity=0.667 Sum_probs=141.5
Q ss_pred CChHHHHHHHHHhc---CCCCcEEEeccC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccc
Q 029962 2 SSPSKRREMDLMKL---MMSDYKVEMIND-GMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNV 77 (184)
Q Consensus 2 ssa~~Rl~kEl~~l---~~~~i~v~~~~~-n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 77 (184)
|++.+||++|++++ +++|+++.+.++ ++++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||
T Consensus 1 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp CTTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred ChHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 45789999999887 778999999876 46699999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCCC
Q 029962 78 DELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPEDI 152 (184)
Q Consensus 78 ~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~~ 152 (184)
+..+|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+.+..
T Consensus 81 ~~~~G~ICL~iL~~~WsP~~ti~~VL~s-I~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~~~ 154 (215)
T 1tte_A 81 SSVTGAICLDILRNAWSPVITLKSALIS-LQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETSN 154 (215)
T ss_dssp CSSSSCCCSSTTTCCSCTTCCHHHHHHH-HHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCCSC
T ss_pred cCCCCEEECccCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCCCc
Confidence 9559999999999999999999999998 9999999999999999999999999999999999999999997653
No 29
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=6.4e-46 Score=286.64 Aligned_cols=144 Identities=28% Similarity=0.551 Sum_probs=138.3
Q ss_pred hHHHHHHHHHhc---CCCCcEE-EeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 4 PSKRREMDLMKL---MMSDYKV-EMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v-~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
+.+||++|++++ ++.|+.+ .+.++|+++|+++|. |++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 83 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE 83 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCC
Confidence 689999999887 6789999 888899999999999 99999999999999999999999999999999999999995
Q ss_pred CCCeEEcccc-CCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCC
Q 029962 80 LSGSVCLDVI-NQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPE 150 (184)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~ 150 (184)
+|.||+++| .++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+++
T Consensus 84 -~G~iCl~iL~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 84 -NGQICLPIISSENWKPCTKTCQVLEA-LNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp -TCBCCCGGGCTTTCCTTCCHHHHHHH-HHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred -CCeEeecCCCccCCCCCCcHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999999 8999999999999998 99999999999999999999999999999999999999999864
No 30
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-45 Score=289.26 Aligned_cols=143 Identities=25% Similarity=0.524 Sum_probs=135.5
Q ss_pred CCC-hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
|++ |.+||++|+++| ++.|+.+.+.++|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|+|||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 777 889999999987 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccC--CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 029962 77 VDELSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEK 145 (184)
Q Consensus 77 V~~~~G~icl~~l~--~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k 145 (184)
|+..+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++ |+++++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~s-I~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLA-LQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHH-HHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 94369999999998 899999999999998 99999999999999999999999999999999 888764
No 31
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=4e-45 Score=285.31 Aligned_cols=142 Identities=31% Similarity=0.584 Sum_probs=134.8
Q ss_pred hHHHHHHHHHhc---CCCCcEEEec-cCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMI-NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~-~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
+.+||++|++++ ++.|+++.+. ++|++.|+++| ||++|||+||+|++.|.||++||++||+|+|.|++|||||+
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~- 92 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNIT- 92 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBC-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCC-
Confidence 789999999987 6789999865 57899999998 89999999999999999999999999999999999999999
Q ss_pred CCCeEEccccCC------ccccCcCchhhHHHHHHHhhcC-CCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcC
Q 029962 80 LSGSVCLDVINQ------TWSPMFDLVNVFEVFLPQLLLY-PNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAK 148 (184)
Q Consensus 80 ~~G~icl~~l~~------~W~p~~~l~~il~~~i~~ll~~-p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~ 148 (184)
.+|.||+++|.. +|+|+++|.+||++ |++||.+ |++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 93 ~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~-i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 93 ETGEICLSLLREHSIDGTGWAPTRTLKDVVWG-LNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHH-HHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEechhhccCCCCCCCCCCcCcHHHHHHH-HHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 599999999975 79999999999998 9999999 69999999999999999999999999999999985
No 32
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.6e-45 Score=288.91 Aligned_cols=146 Identities=26% Similarity=0.564 Sum_probs=136.2
Q ss_pred CCC--hHHHHHHHHHhc---CCCCcEEE-eccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccc
Q 029962 1 MSS--PSKRREMDLMKL---MMSDYKVE-MINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYH 74 (184)
Q Consensus 1 Mss--a~~Rl~kEl~~l---~~~~i~v~-~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 74 (184)
|++ |.+||++|++++ ++.|+++. +.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 555 899999999887 77899999 667899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCeEEccccC-------------CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHh------CHHHH
Q 029962 75 PNVDELSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMR------DRTAY 135 (184)
Q Consensus 75 PnV~~~~G~icl~~l~-------------~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~------n~~~f 135 (184)
|||+. +|.||+++|. +.|+|+++|++||++ |++||.+|++++|+|.+|+.+|++ ++++|
T Consensus 83 PnV~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y 160 (183)
T 3rz3_A 83 PNIYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLS-VISLLNEPNTFSPANVDASVMYRKWKESKGKDREY 160 (183)
T ss_dssp TTBCT-TSBBCCTTC--------------CCCCTTCCHHHHHHH-HHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHH
T ss_pred CCCCC-CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHhcccccccHHHH
Confidence 99995 9999999996 889999999999998 999999999999999999999998 78999
Q ss_pred HHHHHHHHHHHcC
Q 029962 136 DQRVKEFCEKYAK 148 (184)
Q Consensus 136 ~~~~r~~~~k~a~ 148 (184)
.++||++++++..
T Consensus 161 ~~~v~~~v~~s~~ 173 (183)
T 3rz3_A 161 TDIIRKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999865
No 33
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=6.8e-45 Score=285.39 Aligned_cols=147 Identities=24% Similarity=0.493 Sum_probs=135.8
Q ss_pred CCC-hHHHHHHHHHhc-----C------CC---CcEEEe-ccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCC
Q 029962 1 MSS-PSKRREMDLMKL-----M------MS---DYKVEM-INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSP 64 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l-----~------~~---~i~v~~-~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP 64 (184)
|++ +.+||++|++++ + +. ++.+.+ .++|+++|+++|.||++|||+||+|+|+|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 777 899999999876 1 22 356777 7789999999999999999999999999999999999999
Q ss_pred eeeEec-ccccccccCCCCeEEccccC-CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHh-CHHHHHHHHHH
Q 029962 65 SIGFVN-KIYHPNVDELSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMR-DRTAYDQRVKE 141 (184)
Q Consensus 65 ~v~f~t-~i~HPnV~~~~G~icl~~l~-~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~-n~~~f~~~~r~ 141 (184)
+|+|.| +||||||+..+|.||+++|. +.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++ |+++|.++||+
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~s-i~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHA-VWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 999999 99999996469999999998 899999999999998 999999999999999999999999 99999999999
Q ss_pred HHHHHcC
Q 029962 142 FCEKYAK 148 (184)
Q Consensus 142 ~~~k~a~ 148 (184)
|+++++.
T Consensus 162 ~~~~~~~ 168 (172)
T 2y9m_A 162 FLAERER 168 (172)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999875
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-44 Score=281.10 Aligned_cols=142 Identities=28% Similarity=0.574 Sum_probs=135.1
Q ss_pred CCChHHHHHHHHHhc-CCCCcEEE-eccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccccc
Q 029962 1 MSSPSKRREMDLMKL-MMSDYKVE-MINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVD 78 (184)
Q Consensus 1 Mssa~~Rl~kEl~~l-~~~~i~v~-~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 78 (184)
|+.+.+||++|++++ +++|+++. +.++|+++|+++| ||++|||+||+|++.|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (160)
T 1y8x_A 4 ASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNID 82 (160)
T ss_dssp CCHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred ccHHHHHHHHHHHhcCCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCC
Confidence 455899999999998 66799998 7888999999998 99999999999999999999999999999999999999999
Q ss_pred CCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 029962 79 ELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEK 145 (184)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k 145 (184)
. +|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|++.
T Consensus 83 ~-~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 83 L-EGNVCLNILREDWKPVLTINSIIYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred C-CCeEEcccchhhccCCCCHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 5 8999999999999999999999998 999999999999999999999999999999999999874
No 35
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4e-45 Score=286.39 Aligned_cols=146 Identities=58% Similarity=1.039 Sum_probs=134.8
Q ss_pred hHHHHHHHHHhcCCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCCCCe
Q 029962 4 PSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGS 83 (184)
Q Consensus 4 a~~Rl~kEl~~l~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G~ 83 (184)
+.+||++|++++....+.| +.++|++.|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+..+|.
T Consensus 13 ~~~RL~~El~~l~~~~~~v-~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~ 91 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTRKV-YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGS 91 (171)
T ss_dssp CCHHHHHHHHHHHSSSSCE-EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred HHHHHHHHHHHHHhCCCCC-CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCe
Confidence 5799999999983333445 357899999999999999999999999999999999999999999999999999955999
Q ss_pred EEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCC
Q 029962 84 VCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPE 150 (184)
Q Consensus 84 icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~ 150 (184)
||+++|.+.|+|+++|.+||+++|+.||.+|++++|+|.+|+++|++|+++|.++||+|+++||+..
T Consensus 92 iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~~ 158 (171)
T 1yf9_A 92 VCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQ 158 (171)
T ss_dssp BCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCHH
T ss_pred EeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcChh
Confidence 9999999999999999999998348999999999999999999999999999999999999999854
No 36
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.6e-44 Score=280.90 Aligned_cols=139 Identities=27% Similarity=0.554 Sum_probs=133.7
Q ss_pred hHHHHHHHHHhc-CCCCcEEE-eccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCCC
Q 029962 4 PSKRREMDLMKL-MMSDYKVE-MINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELS 81 (184)
Q Consensus 4 a~~Rl~kEl~~l-~~~~i~v~-~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~ 81 (184)
+.+||++|++++ +++|+++. +.++|+++|+++| ||++|||+||+|++.|.||++||++||+|+|.|++|||||+. +
T Consensus 27 ~~~RL~kEl~~l~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~ 104 (180)
T 2nvu_C 27 AQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-E 104 (180)
T ss_dssp HHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-T
T ss_pred HHHHHHHHHHhcCCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC-C
Confidence 789999999998 66799998 7888999999998 999999999999999999999999999999999999999995 8
Q ss_pred CeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 029962 82 GSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEK 145 (184)
Q Consensus 82 G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k 145 (184)
|.||+++|.+.|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|++.
T Consensus 105 G~iCl~iL~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 105 GNVALNILREDWKPVLTINSIIYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CcEEcccccccCCCCCCHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999998 999999999999999999999999999999999999885
No 37
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.2e-44 Score=279.17 Aligned_cols=144 Identities=31% Similarity=0.626 Sum_probs=131.9
Q ss_pred hHHHHHHHHHhc---CCCCcEEEe-ccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEM-INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~-~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
|.+||++|++++ ++.|+.+.+ .++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 569999999988 567887554 6779999999998 99999999999999999999999999999999999999994
Q ss_pred CCCeEEccccC-CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCC
Q 029962 80 LSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPE 150 (184)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~ 150 (184)
+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+.+
T Consensus 82 -~G~iCl~iL~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 82 -KGQVCLPVISAENWKPATKTDQVIQS-LIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp -TCBBCCTTTSSSSCCTTCCHHHHHHH-HHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred -CCEEECCCCCCCCCCCCCcHHHHHHH-HHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 9999999996 899999999999998 99999999999999999999999999999999999999999865
No 38
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4e-44 Score=280.99 Aligned_cols=137 Identities=28% Similarity=0.622 Sum_probs=103.8
Q ss_pred hHHHHHHHHHhc---CCCCcEEEecc-CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMIN-DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~-~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
+.+||++|+++| ++.|+++.+.+ +|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 18 ~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~ 97 (172)
T 2awf_A 18 GSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK 97 (172)
T ss_dssp THHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC
Confidence 789999999887 78899999876 69999999999999999999999999999999999999999999999999995
Q ss_pred CCCeEEccccC-------------CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHH-HHHHHHHHH
Q 029962 80 LSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRT-AYDQRVKEF 142 (184)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~-~f~~~~r~~ 142 (184)
+|.||+++|. +.|+|+++|.+||++ |++||.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 98 -~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~s-I~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 98 -NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMIS-VISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp -TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHH-HHHHHSCC-----------------------------
T ss_pred -CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHH-HHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 8999999996 689999999999998 999999999999999999999999999 999999975
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4.6e-43 Score=278.91 Aligned_cols=142 Identities=30% Similarity=0.542 Sum_probs=134.5
Q ss_pred CChHHHHHHHHHhc-CCCCcEEE----eccCCcc---eEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccc
Q 029962 2 SSPSKRREMDLMKL-MMSDYKVE----MINDGMQ---EFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIY 73 (184)
Q Consensus 2 ssa~~Rl~kEl~~l-~~~~i~v~----~~~~n~~---~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (184)
+.|.+||++||+++ +++|+++. +.++|++ +|+++|. |++|||+||+|++.|.||++||++||+|+|.|++|
T Consensus 28 s~a~~RL~kEl~~l~~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 28 SAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp CHHHHHHHHHHHTCCCCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhccCCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 34899999999998 56799998 7888999 9999996 88899999999999999999999999999999999
Q ss_pred cccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 029962 74 HPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKY 146 (184)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~ 146 (184)
||||+. +|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|++.+
T Consensus 107 HPnV~~-~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 107 HPNIDL-KGNVCLNILREDWSPALDLQSIITG-LLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CTTBCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred cCCCCC-CCeEechhccCCCCCCCCHHHHHHH-HHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999994 9999999999999999999999998 9999999999999999999999999999999999999654
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=6.1e-43 Score=305.72 Aligned_cols=146 Identities=34% Similarity=0.676 Sum_probs=141.3
Q ss_pred ChHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccC
Q 029962 3 SPSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDE 79 (184)
Q Consensus 3 sa~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (184)
.|.+||++|++.+ +++|+++.|.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 3789999999887 7889999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCC
Q 029962 80 LSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPE 150 (184)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~ 150 (184)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+|+++||+..
T Consensus 83 -~G~iCl~il~~~W~p~~~i~~vL~~-i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 83 -NGSISLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp -TCBBCCGGGTTSCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCT
T ss_pred -CCeEeCcccccCCCccccHHHHHHH-HHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999998 99999999999999999999999999999999999999999875
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=7.7e-43 Score=272.46 Aligned_cols=140 Identities=25% Similarity=0.475 Sum_probs=131.5
Q ss_pred CCC-hHHHHHHHHHhc---C------------CCCcEEEeccCCcceEEEEEeCCCCCCCC--CCEEEEEEEcCCCCCCC
Q 029962 1 MSS-PSKRREMDLMKL---M------------MSDYKVEMINDGMQEFYVEFNGPKESSYQ--GGVWKIRVELPDAYPYK 62 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~------------~~~i~v~~~~~n~~~w~~~i~Gp~~tpYe--gg~f~~~i~fp~~YP~~ 62 (184)
||+ +.+||++|++++ + +.++.+.+.++|+++|+++|.||++|||+ ||+|++.|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 787 899999999877 4 56899999999999999999999999999 99999999999999999
Q ss_pred CCeeeEecccccccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcC--CCCCCCccHHHHHHHHhCHHHHHHHHH
Q 029962 63 SPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLY--PNPSDPLNGEAAALMMRDRTAYDQRVK 140 (184)
Q Consensus 63 pP~v~f~t~i~HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~--p~~~~p~n~~a~~~~~~n~~~f~~~~r 140 (184)
||+|+|.|++|||||+ .+|.||+++|.++|+|++++.++|+++|+.|+.. |++++|+|.+|+++|++|+++|.++||
T Consensus 85 pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp CCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred CCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999 5999999999999999999999877668888875 899999999999999999999999998
Q ss_pred H
Q 029962 141 E 141 (184)
Q Consensus 141 ~ 141 (184)
+
T Consensus 164 r 164 (167)
T 4ds2_A 164 R 164 (167)
T ss_dssp T
T ss_pred h
Confidence 3
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=274.52 Aligned_cols=151 Identities=22% Similarity=0.453 Sum_probs=136.6
Q ss_pred hHHHHHHHHHhc---CCC----CcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecc-----
Q 029962 4 PSKRREMDLMKL---MMS----DYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNK----- 71 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~----~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~----- 71 (184)
+.+||++|++.| ++. ++.+.+.++|++.|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 789999999887 444 45678889999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCeEEccccC-------CccccCc-CchhhHHHHHHHhhc--CCCCCCCccHHH--HHHHHhCHHHHHHHH
Q 029962 72 IYHPNVDELSGSVCLDVIN-------QTWSPMF-DLVNVFEVFLPQLLL--YPNPSDPLNGEA--AALMMRDRTAYDQRV 139 (184)
Q Consensus 72 i~HPnV~~~~G~icl~~l~-------~~W~p~~-~l~~il~~~i~~ll~--~p~~~~p~n~~a--~~~~~~n~~~f~~~~ 139 (184)
+|||||+ .+|.||+++|. +.|+|++ +|.+||++ |++||. +|++++|+|.+| +.+|.+|+.+|.++|
T Consensus 157 ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLls-IqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~v 234 (323)
T 3ceg_A 157 RFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVS-VQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNI 234 (323)
T ss_dssp CCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHH-HHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHH
T ss_pred cccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHH-HHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHH
Confidence 9999999 59999999997 6999999 89999998 999996 777899999987 678999999999999
Q ss_pred HHHHHHHcCCCCCCCCC
Q 029962 140 KEFCEKYAKPEDIGGAT 156 (184)
Q Consensus 140 r~~~~k~a~~~~~~~~~ 156 (184)
|+|+++||+.......+
T Consensus 235 r~~t~k~A~~~~l~~Pp 251 (323)
T 3ceg_A 235 RQATVKWAMLEQIRNPS 251 (323)
T ss_dssp HHHHHHHTTHHHHHSCC
T ss_pred HHHHHHHhhHHHHhCCC
Confidence 99999999865444433
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-39 Score=240.36 Aligned_cols=115 Identities=20% Similarity=0.466 Sum_probs=101.4
Q ss_pred CCChHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccc-cccc
Q 029962 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKI-YHPN 76 (184)
Q Consensus 1 Mssa~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPn 76 (184)
|++|.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++ ||||
T Consensus 4 m~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp -----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 778999999999987 678999999999999999999999999999999999999999999999999999996 9999
Q ss_pred ccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCCC
Q 029962 77 VDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117 (184)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~ 117 (184)
|+ .+|.||+++|.++|+|+++|.+||.+ |++||.+|+..
T Consensus 84 v~-~~G~iCl~iL~~~W~P~~~i~~vl~s-i~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VY-SNGDICLSLLGDDYNPSLSISGLVLS-IISMLSSAKEK 122 (125)
T ss_dssp BC-TTSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHC-----
T ss_pred CC-CCCEEEchhcCCCCCCCCcHHHHHHH-HHHHHhCcccc
Confidence 99 59999999999999999999999998 99999999864
No 44
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.3e-38 Score=237.59 Aligned_cols=114 Identities=21% Similarity=0.481 Sum_probs=107.8
Q ss_pred CCChHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccc-cccc
Q 029962 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKI-YHPN 76 (184)
Q Consensus 1 Mssa~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPn 76 (184)
|+++.+||++|++++ ++.|+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++ ||||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 456899999999887 678999999999999999999999999999999999999999999999999999996 9999
Q ss_pred ccCCCCeEEccccCCccccCcCchhhHHHHHHHhhcCCCC
Q 029962 77 VDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116 (184)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~ 116 (184)
|+. +|.||+++|.++|+|+++|.+||.+ |++||.+|+.
T Consensus 98 v~~-~G~ICl~iL~~~WsP~~ti~~vL~s-i~sll~~p~~ 135 (136)
T 2h2y_A 98 VYS-NGDICLSVLGDDYNPSLSISGLILS-IISMLSSAKE 135 (136)
T ss_dssp BCT-TCCBCCGGGTTTCCTTCCHHHHHHH-HHHHHSSSCC
T ss_pred CCC-CCEEECccccCCCCCCCcHHHHHHH-HHHHHhCcCc
Confidence 994 9999999999999999999999998 9999999874
No 45
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.8e-39 Score=246.98 Aligned_cols=125 Identities=17% Similarity=0.301 Sum_probs=113.9
Q ss_pred hHHHHHHHHHhc----CCCCcEEEecc-C--CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 4 PSKRREMDLMKL----MMSDYKVEMIN-D--GMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 4 a~~Rl~kEl~~l----~~~~i~v~~~~-~--n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
+.+||++|++++ ++.|+++.+.. + |++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 789999999987 46789998854 3 5999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeE---EccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 029962 77 VDELSGSV---CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRD 131 (184)
Q Consensus 77 V~~~~G~i---cl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n 131 (184)
|+. +|.| |+++|. +|+|+++|.+||++ |++||.+|++++|+|.+|+.+|++|
T Consensus 102 V~~-~G~icisCL~iL~-~WsP~~ti~~vL~s-I~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 102 VDN-CGRVIKNNLHILK-NWNRNYTIETILIS-LRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp BCT-TSBBCGGGSHHHH-TCCTTCCHHHHHHH-HHHHTTSTTTTTCCCCCTTCBC---
T ss_pred Ccc-CCeEehhhccccc-CCCCcCcHHHHHHH-HHHHHhCCCCCCcCChHHHHHhhhC
Confidence 995 8999 888887 59999999999998 9999999999999999999998765
No 46
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.4e-39 Score=245.43 Aligned_cols=126 Identities=18% Similarity=0.315 Sum_probs=113.1
Q ss_pred CCC--hHHHHHHHHHhc----CCCCcEEEecc-C--CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecc
Q 029962 1 MSS--PSKRREMDLMKL----MMSDYKVEMIN-D--GMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNK 71 (184)
Q Consensus 1 Mss--a~~Rl~kEl~~l----~~~~i~v~~~~-~--n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (184)
|++ +.+||++|++++ ++.|+++.+.. + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 776 779999999987 46799999853 3 59999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCeE--EccccCCccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHH
Q 029962 72 IYHPNVDELSGSV--CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALM 128 (184)
Q Consensus 72 i~HPnV~~~~G~i--cl~~l~~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~ 128 (184)
||||||+..+|.| |++++. +|+|+++|.+||.+ |++||.+|++++|+|.+|+.+|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~-i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLD-LRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHH-HHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHH-HHHHHcCCCCCCCCCcchhhcC
Confidence 9999999655999 899886 89999999999998 9999999999999999987654
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=9.3e-38 Score=242.03 Aligned_cols=121 Identities=20% Similarity=0.309 Sum_probs=111.0
Q ss_pred hHHHHHHHHHhc---CCCC-cEEEec-cCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 4 PSKRREMDLMKL---MMSD-YKVEMI-NDG--MQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~-i~v~~~-~~n--~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
+.+||++|++++ ++.| +++.+. ++| ++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 689999999987 4566 778873 454 899999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccC--CccccCcCchhhHHHHHHHhh-cCCCCCCCccHHHH
Q 029962 77 VDELSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLL-LYPNPSDPLNGEAA 125 (184)
Q Consensus 77 V~~~~G~icl~~l~--~~W~p~~~l~~il~~~i~~ll-~~p~~~~p~n~~a~ 125 (184)
|+..+|.||+++|. ++|+|+++|++||++ |++|| .+|++++|+|.+|+
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~s-I~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQE-LRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHH-HHHHHTSTTTTTCCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHH-HHHHHccCCCCCCCCChhhc
Confidence 98559999999998 899999999999998 99999 47999999999987
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-37 Score=233.66 Aligned_cols=110 Identities=24% Similarity=0.570 Sum_probs=103.0
Q ss_pred CCChHHHHHHHHHhc---CCCCcEEE--eccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccc--
Q 029962 1 MSSPSKRREMDLMKL---MMSDYKVE--MINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIY-- 73 (184)
Q Consensus 1 Mssa~~Rl~kEl~~l---~~~~i~v~--~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~-- 73 (184)
|+++.+||++|++++ +++|+++. +.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 777669999999887 67899865 78889999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeEEccccCCccccCcCchhhHHHHHHHhhc
Q 029962 74 HPNVDELSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLL 112 (184)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~l~~il~~~i~~ll~ 112 (184)
||||+. +|.||+++|.++|+|+++|++||.+ |++||.
T Consensus 100 HPNV~~-~G~ICL~iL~~~WsP~~ti~~vL~s-I~slL~ 136 (136)
T 2a7l_A 100 HPHVYS-NGHICLSILTEDWSPALSVQSVCLS-IISMLS 136 (136)
T ss_dssp BTTBCT-TCBBCCGGGTTTCCTTSCHHHHHHH-HHHHTC
T ss_pred CccCCC-CCeEEchhcCCCCCCCCcHHHHHHH-HHHHhC
Confidence 999994 9999999999999999999999998 998873
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=241.10 Aligned_cols=121 Identities=20% Similarity=0.319 Sum_probs=110.8
Q ss_pred hHHHHHHHHHhc---CCCC-cEEEe-ccCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEeccccccc
Q 029962 4 PSKRREMDLMKL---MMSD-YKVEM-INDG--MQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPN 76 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~-i~v~~-~~~n--~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (184)
+.+||++|++++ ++.| +++.+ .++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 789999999987 4566 67877 4454 999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccccC--CccccCcCchhhHHHHHHHhhc-CCCCCCCccHHHH
Q 029962 77 VDELSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLL-YPNPSDPLNGEAA 125 (184)
Q Consensus 77 V~~~~G~icl~~l~--~~W~p~~~l~~il~~~i~~ll~-~p~~~~p~n~~a~ 125 (184)
|+..+|.||+++|. +.|+|+++|.+||++ |++||. .|++++|+|.+|+
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~s-I~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQE-LRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHH-HHHHHHSTTTSSSCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHH-HHHHHccCCCCCCCCCcccc
Confidence 98559999999997 899999999999998 999996 5999999999886
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-34 Score=230.02 Aligned_cols=141 Identities=18% Similarity=0.409 Sum_probs=112.0
Q ss_pred hHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCC
Q 029962 4 PSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80 (184)
Q Consensus 4 a~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (184)
+.+||++|+++| +++|+.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ ||||+.
T Consensus 15 a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~- 91 (187)
T 2f4w_A 15 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC- 91 (187)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc-
Confidence 689999999887 67899999999999999999999999999999999999999999999999999998 999994
Q ss_pred CCeEEcccc---CCccccCcCchhhHHHHHHHhhcCCCCCCC---ccHHHHHHHHhCHHHHH-------HHHHHHHHHHc
Q 029962 81 SGSVCLDVI---NQTWSPMFDLVNVFEVFLPQLLLYPNPSDP---LNGEAAALMMRDRTAYD-------QRVKEFCEKYA 147 (184)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~l~~il~~~i~~ll~~p~~~~p---~n~~a~~~~~~n~~~f~-------~~~r~~~~k~a 147 (184)
+|.||+++| .+.|+|+++|.+||.+ |++||.+|+++.. .+.....+|..+...|+ +...++++++.
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~s-i~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~~~~f~~~fp~~~~~~~ 170 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTG-LLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIK 170 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHH-HHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHHHCHHHHHHHC
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHH-HHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhcCchHHHhhHHHHHHHH
Confidence 999999999 6899999999999998 9999999987643 23344445544444444 44445555555
Q ss_pred C
Q 029962 148 K 148 (184)
Q Consensus 148 ~ 148 (184)
.
T Consensus 171 ~ 171 (187)
T 2f4w_A 171 Q 171 (187)
T ss_dssp -
T ss_pred H
Confidence 4
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.6e-36 Score=240.48 Aligned_cols=137 Identities=18% Similarity=0.332 Sum_probs=120.7
Q ss_pred CCC-hHHHHHHHHHhc---C---CCCcEEEeccCCcceEEEEEeCC-CCCCCCC-----------CEEEEEEEcCCCCCC
Q 029962 1 MSS-PSKRREMDLMKL---M---MSDYKVEMINDGMQEFYVEFNGP-KESSYQG-----------GVWKIRVELPDAYPY 61 (184)
Q Consensus 1 Mss-a~~Rl~kEl~~l---~---~~~i~v~~~~~n~~~w~~~i~Gp-~~tpYeg-----------g~f~~~i~fp~~YP~ 61 (184)
|++ |.+||++||+++ + +.++++.+.++|+++|+++|.|| ++|||+| |+|++.|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 455 789999999987 3 47899999999999999999998 9999998 899999999999999
Q ss_pred CCCeeeEecccccc-cccCCCCeEEccccC-CccccCcCchhhHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHH
Q 029962 62 KSPSIGFVNKIYHP-NVDELSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYDQRV 139 (184)
Q Consensus 62 ~pP~v~f~t~i~HP-nV~~~~G~icl~~l~-~~W~p~~~l~~il~~~i~~ll~~p~~~~p~n~~a~~~~~~n~~~f~~~~ 139 (184)
+||+|+|.|++||| ||+ .+|.||+++|. ++|+|+++|.+||++ |++||.+|+.. ..|..++.+|.+++
T Consensus 104 ~PP~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL~s-I~slL~~p~a~--------~~~~~~~~~Y~~~~ 173 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVIMQ-INATLVKGKAR--------VQFGANKNQYNLAR 173 (186)
T ss_dssp SCCEEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHHHH-HHHHHHHTTCE--------ECTTCCTTCCCHHH
T ss_pred CCCeEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHHHH-HHHHHcCCChh--------HhhccCHHHHhHHH
Confidence 99999999999999 699 59999999997 799999999999998 99999988643 24455677888888
Q ss_pred HHHHHHHc
Q 029962 140 KEFCEKYA 147 (184)
Q Consensus 140 r~~~~k~a 147 (184)
++++.+.+
T Consensus 174 ~~~~~~~~ 181 (186)
T 1zuo_A 174 AQQSYNSI 181 (186)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.92 E-value=1.6e-26 Score=177.94 Aligned_cols=97 Identities=18% Similarity=0.332 Sum_probs=87.7
Q ss_pred HHHHHHHHHhcCCCCcEEEeccCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeeeEecc-cc
Q 029962 5 SKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGG----------VWKIRVELPDAYPYKSPSIGFVNK-IY 73 (184)
Q Consensus 5 ~~Rl~kEl~~l~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg----------~f~~~i~fp~~YP~~pP~v~f~t~-i~ 73 (184)
.+||++|+++|.. ++.+..+|++.|.+++.||.+|+|+|| .|.++|.||.+||++||+|+|.+. +|
T Consensus 34 ~~RL~eE~k~L~k---~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~ 110 (172)
T 2z6o_A 34 VQRLKEEYQSLIR---YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGK 110 (172)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHHH---HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCC
Confidence 8999999998744 466777899999999999999999999 999999999999999999999998 99
Q ss_pred cccccCCCCeEEcccc-CC---ccccCcCchhhHHH
Q 029962 74 HPNVDELSGSVCLDVI-NQ---TWSPMFDLVNVFEV 105 (184)
Q Consensus 74 HPnV~~~~G~icl~~l-~~---~W~p~~~l~~il~~ 105 (184)
||||+. +|+|||+++ +. .|+|.++|..+|..
T Consensus 111 hpnmY~-~G~ICLdIL~kp~Ws~~~P~~~IahiL~l 145 (172)
T 2z6o_A 111 TAKMYR-GGKICLTDHFKPLWARNVPKFGLAHLMAL 145 (172)
T ss_dssp CSSBCT-TSBBCCCTTHHHHHHHHTTSCCHHHHHHH
T ss_pred CCCCCC-CCcEechhhccccccccCCccCHHHHHhh
Confidence 999995 999999999 44 45599999999854
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.74 E-value=3.5e-18 Score=132.06 Aligned_cols=110 Identities=22% Similarity=0.393 Sum_probs=88.5
Q ss_pred HHHHHHHHhc--CCC----CcEEEeccCCcceEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCeeeEecc-----
Q 029962 6 KRREMDLMKL--MMS----DYKVEMINDGMQEFYVEFNGPKESSYQGGV---WKIRVELPDAYPYKSPSIGFVNK----- 71 (184)
Q Consensus 6 ~Rl~kEl~~l--~~~----~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~---f~~~i~fp~~YP~~pP~v~f~t~----- 71 (184)
+|..+|+..+ .-+ ...+...++....+.+.+.|.-.++|+|++ |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 5556666554 112 233445566777777788887779999999 88999999999999999988651
Q ss_pred -----cc-cccccCCCCeEEccccCCcccc-CcCchhhHHHHHHHhhcCCCCCC
Q 029962 72 -----IY-HPNVDELSGSVCLDVINQTWSP-MFDLVNVFEVFLPQLLLYPNPSD 118 (184)
Q Consensus 72 -----i~-HPnV~~~~G~icl~~l~~~W~p-~~~l~~il~~~i~~ll~~p~~~~ 118 (184)
|+ ||||+ .+|+||+++|. .|++ +.+|.++|.+ |+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD-~~G~I~lpyL~-~W~p~~s~L~~ll~~-l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYID-SNGWIALPILH-AWDPAAMNLIMVVQE-LMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBC-TTSBBCCGGGG-SCCGGGCCHHHHHHH-HHHTTSCCCCCC
T ss_pred ccccccCCCCCCC-CCCcEeCcccc-cCCCCcCcHHHHHHH-HHHHhcCCCCCC
Confidence 77 99999 59999999995 6988 6799999998 999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.65 E-value=7.6e-18 Score=127.14 Aligned_cols=86 Identities=16% Similarity=0.374 Sum_probs=72.7
Q ss_pred HHHHHHHHHhcCCCCcEEEeccCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeeeEecc-cc
Q 029962 5 SKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGG----------VWKIRVELPDAYPYKSPSIGFVNK-IY 73 (184)
Q Consensus 5 ~~Rl~kEl~~l~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg----------~f~~~i~fp~~YP~~pP~v~f~t~-i~ 73 (184)
.+||..|++.|.. +|+...++-..|...+.||.||+|.|+ .|.+++.||.+||.+||.|+|.+. .+
T Consensus 36 ~~RlkeEy~alI~---yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgk 112 (168)
T 3kpa_A 36 TARLKEEYASLIT---YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGK 112 (168)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHHH---HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCc
Confidence 4899999986621 244455567889999999999999999 999999999999999999999995 89
Q ss_pred cccccCCCCeEEccccCCccccCc
Q 029962 74 HPNVDELSGSVCLDVINQTWSPMF 97 (184)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~ 97 (184)
|||++ .+|+|||+++ |+|.+
T Consensus 113 t~kmY-r~GkICLdIh---wkPlW 132 (168)
T 3kpa_A 113 TVKMY-RGGKICMTTH---FFPLW 132 (168)
T ss_dssp CSSEE-TTTEECCCTT---HHHHH
T ss_pred Ccccc-CCCcEEeccc---cchhh
Confidence 99999 5999999987 55443
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.39 E-value=4.8e-13 Score=101.58 Aligned_cols=78 Identities=24% Similarity=0.477 Sum_probs=67.8
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCeeeEecc------cccccccCCCCeEEccccCCcccc-Cc
Q 029962 27 DGMQEFYVEFNGPKESSYQGGVWKI--RVELPDAYPYKSPSIGFVNK------IYHPNVDELSGSVCLDVINQTWSP-MF 97 (184)
Q Consensus 27 ~n~~~w~~~i~Gp~~tpYegg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnV~~~~G~icl~~l~~~W~p-~~ 97 (184)
.++..|.++|. .+|+|++|.+ .|.||.+||++||.| |.++ ..||||+ .+|+||+..|.+ |++ ..
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd-~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVD-ANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBC-TTCBBCCHHHHT-CCTTTC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCC-CCCCEecccccc-cCCCCC
Confidence 57899999996 6899999984 999999999999999 6655 4899999 599999999965 987 77
Q ss_pred CchhhHHHHHHHhhc
Q 029962 98 DLVNVFEVFLPQLLL 112 (184)
Q Consensus 98 ~l~~il~~~i~~ll~ 112 (184)
+|.+++.. |+.+|.
T Consensus 124 nL~~ll~~-l~~~F~ 137 (146)
T 3obq_A 124 DLLGLIQV-MIVVFG 137 (146)
T ss_dssp CHHHHHHH-HHHHHH
T ss_pred CHHHHHHH-HHHHHh
Confidence 99999987 888775
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.58 E-value=0.0069 Score=43.76 Aligned_cols=68 Identities=12% Similarity=0.256 Sum_probs=42.5
Q ss_pred CCChHHHHHHHHHhc---CCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEec
Q 029962 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVN 70 (184)
Q Consensus 1 Mssa~~Rl~kEl~~l---~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t 70 (184)
|+....+...|+..| -+..+.+ .......+.+.|..-.+..-+.-.+.+.|.||++||..||.|.+.+
T Consensus 8 m~~~~e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 8 MTDYGEEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 444556677787666 3333333 3333456666665222222234578999999999999999998754
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.02 E-value=0.092 Score=38.22 Aligned_cols=41 Identities=20% Similarity=0.378 Sum_probs=29.6
Q ss_pred cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEec
Q 029962 29 MQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVN 70 (184)
Q Consensus 29 ~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t 70 (184)
...+.+.|.+..+ .-..-.+.+.|.+|++||..||.|.+.+
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 4667777763222 1123478899999999999999998754
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.17 E-value=0.31 Score=34.82 Aligned_cols=65 Identities=18% Similarity=0.277 Sum_probs=38.8
Q ss_pred HHHHHHHHhc---CCCCcEEEecc--CCcceEEEEEeCCCCCCC--CCCEEEEEEEcCCCCCCCCCeeeEec
Q 029962 6 KRREMDLMKL---MMSDYKVEMIN--DGMQEFYVEFNGPKESSY--QGGVWKIRVELPDAYPYKSPSIGFVN 70 (184)
Q Consensus 6 ~Rl~kEl~~l---~~~~i~v~~~~--~n~~~w~~~i~Gp~~tpY--egg~f~~~i~fp~~YP~~pP~v~f~t 70 (184)
.++..|+..| -...+.+.-.. .....+.+.|..+.+..- ..-.+.+.|.+|++||..+|.|...+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 4566777655 34444433211 123455555642222111 12478899999999999999998765
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.00 E-value=0.21 Score=35.79 Aligned_cols=64 Identities=16% Similarity=0.155 Sum_probs=38.4
Q ss_pred HHHHHHHHHhc----CC-CCcEEE-eccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEe
Q 029962 5 SKRREMDLMKL----MM-SDYKVE-MINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFV 69 (184)
Q Consensus 5 ~~Rl~kEl~~l----~~-~~i~v~-~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~ 69 (184)
..+...|+..| .. ..+.+. -...+...+.+.|.. .+..=..-.+.+.|.+|++||..||.|...
T Consensus 9 ~e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 9 AEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CHHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 34556676655 21 134321 111234577777763 221111347899999999999999999765
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.03 E-value=0.39 Score=34.64 Aligned_cols=66 Identities=24% Similarity=0.290 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHhc---CCCCcEEEeccC-----CcceEEEEEeCCCC-C-CCCCCEEEEEEEcCCCCCCCCCeeeEe
Q 029962 3 SPSKRREMDLMKL---MMSDYKVEMIND-----GMQEFYVEFNGPKE-S-SYQGGVWKIRVELPDAYPYKSPSIGFV 69 (184)
Q Consensus 3 sa~~Rl~kEl~~l---~~~~i~v~~~~~-----n~~~w~~~i~Gp~~-t-pYegg~f~~~i~fp~~YP~~pP~v~f~ 69 (184)
....+...|+..| -...+.+.-... ....+.+.|. +.+ . .-..-.+.+.|.||++||..+|.|.+.
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 10 SYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred chHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 3455666677655 333333211111 1345666665 321 1 001247899999999999999999874
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=91.40 E-value=1.6 Score=33.82 Aligned_cols=77 Identities=16% Similarity=0.270 Sum_probs=53.9
Q ss_pred HHHHHHHhcCCCCcEEEeccCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccccccccCCCCeEEc
Q 029962 7 RREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86 (184)
Q Consensus 7 Rl~kEl~~l~~~~i~v~~~~~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G~icl 86 (184)
||.+|+..+.=.- +.-.+.++....+.+..- .|....++|.++.+||.+||.+...-|+ |.
T Consensus 5 ~li~Ei~~iGW~~--l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~---------- 65 (186)
T 3zqs_A 5 SLIEEIGTLGWDK--LVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--PF---------- 65 (186)
T ss_dssp SHHHHHHHHCGGG--EEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--CC----------
T ss_pred HHHHHHHHhCCce--eeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc----------
Confidence 5777777662211 222345788888888743 3789999999999999999987654332 11
Q ss_pred cccCCccccCcCchhhHHH
Q 029962 87 DVINQTWSPMFDLVNVFEV 105 (184)
Q Consensus 87 ~~l~~~W~p~~~l~~il~~ 105 (184)
.-.|++..+|..++.+
T Consensus 66 ---~~~w~~~ssL~~v~~q 81 (186)
T 3zqs_A 66 ---CASWTPQSSLISIYSQ 81 (186)
T ss_dssp ---CCCCCTTCCHHHHHHH
T ss_pred ---ccccCCCccHHHHHHH
Confidence 1259999899988876
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.10 E-value=0.67 Score=34.44 Aligned_cols=23 Identities=22% Similarity=0.405 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCeeeEec
Q 029962 48 VWKIRVELPDAYPYKSPSIGFVN 70 (184)
Q Consensus 48 ~f~~~i~fp~~YP~~pP~v~f~t 70 (184)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 89999999999999999998654
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=86.19 E-value=0.58 Score=34.57 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=20.9
Q ss_pred CEEEEEEEcCCCCCCCCCeeeEec
Q 029962 47 GVWKIRVELPDAYPYKSPSIGFVN 70 (184)
Q Consensus 47 g~f~~~i~fp~~YP~~pP~v~f~t 70 (184)
-.+.+.|.+|.+||..||.|....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 368899999999999999998664
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=78.51 E-value=0.46 Score=33.65 Aligned_cols=43 Identities=9% Similarity=0.008 Sum_probs=0.0
Q ss_pred hcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcCCCCCC
Q 029962 111 LLYPNPSDPLNGEAAALMMRDRTAYDQRVKEFCEKYAKPEDIG 153 (184)
Q Consensus 111 l~~p~~~~p~n~~a~~~~~~n~~~f~~~~r~~~~k~a~~~~~~ 153 (184)
|.-.....|.+..+|++|++|++.|...+|.|+.-||......
T Consensus 18 ~~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~~~~~~ 60 (108)
T 2cwb_A 18 LKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTV 60 (108)
T ss_dssp -------------------------------------------
T ss_pred ccCcccCCchhHHHHHHHHhchhccccccccccccCcCCCCCC
Confidence 3444567789999999999999999999999998777655444
No 65
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=30.18 E-value=1.2e+02 Score=23.01 Aligned_cols=45 Identities=18% Similarity=0.303 Sum_probs=33.1
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeeeEecccc
Q 029962 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIY 73 (184)
Q Consensus 27 ~n~~~w~~~i~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (184)
.....|.+.+.|+.+.-...-+=++.+.+.+.||. |...+..+-|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 35778999999987655555577899999999975 6666655433
No 66
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=25.66 E-value=1.5e+02 Score=21.55 Aligned_cols=43 Identities=9% Similarity=0.167 Sum_probs=32.2
Q ss_pred cceEE--EEEeCCCCCCCC-CCEEEEEEEcCCCCCCCCCeeeEecccc
Q 029962 29 MQEFY--VEFNGPKESSYQ-GGVWKIRVELPDAYPYKSPSIGFVNKIY 73 (184)
Q Consensus 29 ~~~w~--~~i~Gp~~tpYe-gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (184)
+..|. +.+.|+.+.... .-+=++...+.+.|+. |...+..+-|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCCc
Confidence 46898 889999887664 4566788888898874 7777766544
Done!