BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029964
(184 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255574159|ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
gi|223532621|gb|EEF34407.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
Length = 231
Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/173 (89%), Positives = 168/173 (97%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKN L+TG+IVGGWDKY+G
Sbjct: 59 AADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLISYNNKNMLETGLIVGGWDKYDG 118
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYG+PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTK+EAEQLVVKAVSLA+ARDG
Sbjct: 119 GKIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAMARDG 178
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD+LPLWHEELEPQNSLLD++N +SPEPMN+
Sbjct: 179 ASGGVVRTVIINSEGVTRNFYPGDSLPLWHEELEPQNSLLDILNASSPEPMNI 231
>gi|449442012|ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
gi|449499516|ref|XP_004160837.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
Length = 235
Score = 331 bits (849), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 154/173 (89%), Positives = 168/173 (97%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLL+Y+NKN LQTG+IVGGWDKY+G
Sbjct: 63 AADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYSNKNMLQTGLIVGGWDKYDG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IYG+PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE M++EEAEQLVVKAVSLAIARDG
Sbjct: 123 GRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEEMSREEAEQLVVKAVSLAIARDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTVTINSEGV+RKFYPGD LPLWHEELEP+NSLLD++N +SPEPMN+
Sbjct: 183 ASGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNI 235
>gi|15235889|ref|NP_194858.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|334187059|ref|NP_001190879.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|82581522|sp|Q8LD27.2|PSB6_ARATH RecName: Full=Proteasome subunit beta type-6; AltName: Full=20S
proteasome beta subunit A-1; AltName: Full=Proteasome
component D; AltName: Full=Proteasome subunit beta
type-1; Flags: Precursor
gi|2511594|emb|CAA74028.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421099|gb|AAC32065.1| 20S proteasome subunit PBA1 [Arabidopsis thaliana]
gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
gi|16323318|gb|AAL15414.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
gi|332660487|gb|AEE85887.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|332660489|gb|AEE85889.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
Length = 233
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/173 (86%), Positives = 162/173 (93%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDKYEG
Sbjct: 61 AADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWK+ MTKEEAEQLVVKAVSLAIARDG
Sbjct: 121 GKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD L LWHEELEPQNSLLD++N A PEPM M
Sbjct: 181 ASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 233
>gi|297802906|ref|XP_002869337.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
lyrata]
gi|297315173|gb|EFH45596.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
lyrata]
Length = 234
Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/174 (87%), Positives = 163/174 (93%), Gaps = 1/174 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK-NFLQTGMIVGGWDKYE 70
AADSQ VSDYVRYFLHQHTIQLGQPATVKV+ANL+R+L+YNNK N LQTG+IVGGWDKYE
Sbjct: 61 AADSQVVSDYVRYFLHQHTIQLGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYE 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GGKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWKE MTKEEAEQLVVKAVSLAIARD
Sbjct: 121 GGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKENMTKEEAEQLVVKAVSLAIARD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
GASGGVVRTV INSEGV+R FYPGD L LWHEELEPQNSLLD++N A PEPM M
Sbjct: 181 GASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 234
>gi|21592365|gb|AAM64316.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
Length = 223
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 149/173 (86%), Positives = 162/173 (93%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVR+FLHQHTIQ GQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDKYEG
Sbjct: 51 AADSQVVSDYVRHFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWK+ MTKEEAEQLVVKAVSLAIARDG
Sbjct: 111 GKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDG 170
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD L LWHEELEPQNSLLD++N A PEPM M
Sbjct: 171 ASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 223
>gi|388508100|gb|AFK42116.1| unknown [Lotus japonicus]
Length = 233
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/173 (87%), Positives = 164/173 (94%), Gaps = 2/173 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFL+TG+IVGGWDKYEG
Sbjct: 63 AADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+GVPLGGTI++QPFAIGGSGSSYLYGFFDQAWK+GMTK+EAE LV KAVSLAIARDG
Sbjct: 123 GQIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD LPLWHEELEPQNSLLD++ +PEPMN+
Sbjct: 183 ASGGVVRTVIINSEGVTRNFYPGDQLPLWHEELEPQNSLLDIL--GAPEPMNI 233
>gi|356507848|ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
Length = 233
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/173 (87%), Positives = 163/173 (94%), Gaps = 2/173 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFL+TG+IVGGWDKYEG
Sbjct: 63 AADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IYGVPLGGTI++QPFAIGGSGSSYLYGFFDQAWKEGMTK+EAE LV KAVSLAIARDG
Sbjct: 123 GQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD LPLWHEE+EP NSLLD++ +PEPM+M
Sbjct: 183 ASGGVVRTVIINSEGVTRNFYPGDQLPLWHEEMEPHNSLLDIL--GAPEPMSM 233
>gi|79325892|ref|NP_001031759.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|332660488|gb|AEE85888.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
Length = 234
Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 150/174 (86%), Positives = 162/174 (93%), Gaps = 1/174 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK-NFLQTGMIVGGWDKYE 70
AADSQ VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNK N LQTG+IVGGWDKYE
Sbjct: 61 AADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYE 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GGKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWK+ MTKEEAEQLVVKAVSLAIARD
Sbjct: 121 GGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
GASGGVVRTV INSEGV+R FYPGD L LWHEELEPQNSLLD++N A PEPM M
Sbjct: 181 GASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 234
>gi|351721274|ref|NP_001236436.1| uncharacterized protein LOC100305513 [Glycine max]
gi|255625747|gb|ACU13218.1| unknown [Glycine max]
Length = 233
Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/173 (86%), Positives = 161/173 (93%), Gaps = 2/173 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLL+YNNKNFLQTG+IVGGWDKYEG
Sbjct: 63 AADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNFLQTGLIVGGWDKYEG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IYGVPLGGT ++QPFAIGGSGSSYLYGFFDQAWKEGMTK+EAE LV KAVSLAIARDG
Sbjct: 123 GQIYGVPLGGTTVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD LPLWHEE+E NSLLD++ V PEPM+M
Sbjct: 183 ASGGVVRTVIINSEGVTRNFYPGDQLPLWHEEMEAHNSLLDILGV--PEPMSM 233
>gi|224118628|ref|XP_002331409.1| predicted protein [Populus trichocarpa]
gi|118484942|gb|ABK94336.1| unknown [Populus trichocarpa]
gi|222873623|gb|EEF10754.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 314 bits (805), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 165/171 (96%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR+LSYNNKNFLQTGMIVGGWDKYEG
Sbjct: 65 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRMLSYNNKNFLQTGMIVGGWDKYEG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYGVPLGGT++E PF IGGSGSSYLYGFFDQAWK+GMT+EEAEQLVVKAVSLAIARDG
Sbjct: 125 GKIYGVPLGGTLLELPFTIGGSGSSYLYGFFDQAWKDGMTQEEAEQLVVKAVSLAIARDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTINSEGVSRK+YP D LP WHEELEPQNSLLD+++ +SPEPM
Sbjct: 185 ASGGVVRTVTINSEGVSRKYYPEDKLPRWHEELEPQNSLLDILSSSSPEPM 235
>gi|296051291|gb|ADG86642.1| 20S proteasome subunit PBA1 [Populus tomentosa]
Length = 237
Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 165/171 (96%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK+EG
Sbjct: 65 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKHEG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYGVPLGGT++E PF IGGSGSSYLYGFFDQAWK+GMT+EEAEQLVVKAVSLAIARDG
Sbjct: 125 GKIYGVPLGGTLLELPFTIGGSGSSYLYGFFDQAWKDGMTQEEAEQLVVKAVSLAIARDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTINSEGVSRK+YP D LP WHEELEPQNSLLD+++ +SPEPM
Sbjct: 185 ASGGVVRTVTINSEGVSRKYYPEDKLPRWHEELEPQNSLLDILSSSSPEPM 235
>gi|225429850|ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
Length = 231
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/173 (87%), Positives = 166/173 (95%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKN L+TG+IVGGWDKYEG
Sbjct: 59 AADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEG 118
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIY +PLGGTIIEQPFAIGGSGS+YLYGFFDQAWKEGMTK+EAEQLVVKAVSLAIARDG
Sbjct: 119 GKIYAIPLGGTIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDG 178
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGV+RTV INSEGV+R FYPGD+LPLWHEEL PQNSLL++++ +SPEPMN+
Sbjct: 179 ASGGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMNV 231
>gi|296081796|emb|CBI20801.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/173 (87%), Positives = 166/173 (95%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKN L+TG+IVGGWDKYEG
Sbjct: 51 AADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIY +PLGGTIIEQPFAIGGSGS+YLYGFFDQAWKEGMTK+EAEQLVVKAVSLAIARDG
Sbjct: 111 GKIYAIPLGGTIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDG 170
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGV+RTV INSEGV+R FYPGD+LPLWHEEL PQNSLL++++ +SPEPMN+
Sbjct: 171 ASGGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMNV 223
>gi|225445670|ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
gi|297736018|emb|CBI24056.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 311 bits (798), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 166/171 (97%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ +SDYVRY+LHQHTIQLGQPATVKVAANLVRL+SYNNKN LQTG+IVGGWDK+EG
Sbjct: 60 AADSQILSDYVRYYLHQHTIQLGQPATVKVAANLVRLISYNNKNMLQTGLIVGGWDKHEG 119
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYGVPLGGTI+EQPFAIGGSGSSYLYGFFDQ WKEGMTK+EAE+LVVKAVSLAIARDG
Sbjct: 120 GKIYGVPLGGTILEQPFAIGGSGSSYLYGFFDQEWKEGMTKDEAEKLVVKAVSLAIARDG 179
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTINSEGV++ FYPGDTLPLWHEELEPQNSLLD+++ +SPEPM
Sbjct: 180 ASGGVVRTVTINSEGVTKNFYPGDTLPLWHEELEPQNSLLDILSSSSPEPM 230
>gi|357466571|ref|XP_003603570.1| Proteasome subunit beta type [Medicago truncatula]
gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
gi|355492618|gb|AES73821.1| Proteasome subunit beta type [Medicago truncatula]
gi|388518779|gb|AFK47451.1| unknown [Medicago truncatula]
Length = 232
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/173 (84%), Positives = 161/173 (93%), Gaps = 2/173 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLL+YNNKN LQTG+IVGGWDKYEG
Sbjct: 62 AADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNNLQTGLIVGGWDKYEG 121
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IYGVPLGGTI++QPFAIGGSGSSYLYGFFDQAWK+GMTK+EAE LV KAVSLAIARDG
Sbjct: 122 GQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDG 181
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 184
ASGGVVRTV INSEGV+R FYPGD LP+WH+ELE NSLLD++ +PEPMN+
Sbjct: 182 ASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHNSLLDIL--GAPEPMNI 232
>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 164/171 (95%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSY+NKN LQTGMI+GGWDKYEG
Sbjct: 65 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYSNKNMLQTGMIIGGWDKYEG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYGVPLGGT++E PF IGGSGS+YLYGFFDQAWKEGMT+EEAEQLVVKAVSLAIARDG
Sbjct: 125 GKIYGVPLGGTLLELPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTINSEGV+RK+YP D LP WHEELEPQNSLLD+++ +SPEPM
Sbjct: 185 ASGGVVRTVTINSEGVTRKYYPEDKLPRWHEELEPQNSLLDILSSSSPEPM 235
>gi|3024440|sp|P93395.1|PSB6_TOBAC RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Proteasome delta chain; AltName: Full=Tobacco
cryptogein-induced protein 7; Short=tcI 7; Flags:
Precursor
gi|1743356|emb|CAA70699.1| proteasome delta subunit [Nicotiana tabacum]
Length = 234
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/171 (84%), Positives = 158/171 (92%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANL RLLSYNNK+ LQTGMI+GGWDKYEG
Sbjct: 62 AADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEG 121
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYG+P GGT++EQPFAIGGSGSSYLYGFFDQAWKEGMT+EEAE+LVV AVSLAIARDG
Sbjct: 122 GKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDG 181
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN +G +RKFY GD+L LWHEELEP NSLLD++ +SP PM
Sbjct: 182 ASGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDVVFASSPVPM 232
>gi|115466298|ref|NP_001056748.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|55296478|dbj|BAD68674.1| putative beta 1 subunit of 20S proteasome [Oryza sativa Japonica
Group]
gi|113594788|dbj|BAF18662.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|125553981|gb|EAY99586.1| hypothetical protein OsI_21564 [Oryza sativa Indica Group]
gi|125595991|gb|EAZ35771.1| hypothetical protein OsJ_20062 [Oryza sativa Japonica Group]
gi|215679027|dbj|BAG96457.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/171 (79%), Positives = 155/171 (90%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +S+YVRYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 74 AADTQVISEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI+ QPFAIGGSGSSYLYG D WKEGM++EEAE+ VVK VSLAIARDG
Sbjct: 134 GQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDG 193
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GVSRKF+PGD LPLWHEE+EPQNSLLD++ +P+PM
Sbjct: 194 ASGGVVRTVTINADGVSRKFHPGDKLPLWHEEMEPQNSLLDILAAGNPDPM 244
>gi|115448935|ref|NP_001048247.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|8671502|dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|46805414|dbj|BAD16916.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113537778|dbj|BAF10161.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|125541285|gb|EAY87680.1| hypothetical protein OsI_09094 [Oryza sativa Indica Group]
gi|125583826|gb|EAZ24757.1| hypothetical protein OsJ_08530 [Oryza sativa Japonica Group]
gi|215737147|dbj|BAG96076.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737608|dbj|BAG96738.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765462|dbj|BAG87159.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 137/171 (80%), Positives = 154/171 (90%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 74 AADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI+ QPFAIGGSGSSYLYG D WKEGM++EEAE+ VVK VSLAIARDG
Sbjct: 134 GQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDG 193
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GVSRKF+PGD L LWHEELEPQNSLLD++ +P+PM
Sbjct: 194 ASGGVVRTVTINADGVSRKFHPGDKLQLWHEELEPQNSLLDILAAGNPDPM 244
>gi|194705072|gb|ACF86620.1| unknown [Zea mays]
gi|413953291|gb|AFW85940.1| hypothetical protein ZEAMMB73_018202 [Zea mays]
Length = 216
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 137/182 (75%), Positives = 157/182 (86%)
Query: 1 MNIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG 60
M C L QAAD+Q +SDY+RYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ G
Sbjct: 33 MQNSCYFNLSQAADTQVISDYIRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAG 92
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
MIVGGWDKYEGG+I+ VPLGGTI++QPFAIGGSGSSYLY D WKEGM++EEAE+ VV
Sbjct: 93 MIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVV 152
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPE 180
K VSLA+ARDGASGGVVRTVTIN++GV R FYPGD LPLWH+ELEPQNSLLD++ +P+
Sbjct: 153 KVVSLAMARDGASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPQNSLLDILAAGNPD 212
Query: 181 PM 182
PM
Sbjct: 213 PM 214
>gi|357110830|ref|XP_003557219.1| PREDICTED: proteasome subunit beta type-6-like [Brachypodium
distachyon]
Length = 242
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 137/172 (79%), Positives = 153/172 (88%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQ GQPATVKVA+NLVRLL+Y NK+ LQ GMIVGGWDKYEG
Sbjct: 70 AADTQVISDYVRYFLHQHTIQSGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEG 129
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPFAIGGSGSSYLYG D WKEGMT+EEAE+ VVK VSLAIARDG
Sbjct: 130 GQIYSVPLGGTILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDG 189
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMN 183
ASGGVVRTVTIN+EGV R F+PGD LPLWHEELEPQNSLLD++ +P+PM+
Sbjct: 190 ASGGVVRTVTINAEGVKRSFHPGDKLPLWHEELEPQNSLLDILAAGNPDPMD 241
>gi|119638448|gb|ABL85039.1| proteasome [Brachypodium sylvaticum]
Length = 242
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 153/172 (88%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQ GQPATVKVA+NLVRLL+Y NK+ LQ GMIVGGWDKYEG
Sbjct: 70 AADTQVISDYVRYFLHQHTIQSGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEG 129
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPFAIGGSGSSYLYG D WKEGMT+EEAE+ VVK VSLAIARDG
Sbjct: 130 GQIYSVPLGGTILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDG 189
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMN 183
ASGGVVRTVTIN+EGV R F+PGD LPLWHEE+EPQNSLLD++ +P+PM+
Sbjct: 190 ASGGVVRTVTINAEGVKRSFHPGDKLPLWHEEMEPQNSLLDILAAGNPDPMD 241
>gi|194701304|gb|ACF84736.1| unknown [Zea mays]
gi|194701404|gb|ACF84786.1| unknown [Zea mays]
gi|413942810|gb|AFW75459.1| proteasome subunit beta type [Zea mays]
Length = 244
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 134/171 (78%), Positives = 153/171 (89%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 72 AADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI++QPFAIGGSGSSYLY D WKEGM++EEAE+ VVK VSLA+ARDG
Sbjct: 132 GQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GV R FYPGD LPLWH+ELEPQNSLLD++ +P+PM
Sbjct: 192 ASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPQNSLLDILAAGNPDPM 242
>gi|195629028|gb|ACG36246.1| proteasome subunit beta type 6 precursor [Zea mays]
gi|413953290|gb|AFW85939.1| proteasome subunit beta type [Zea mays]
Length = 243
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 133/171 (77%), Positives = 153/171 (89%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDY+RYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 71 AADTQVISDYIRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 130
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI++QPFAIGGSGSSYLY D WKEGM++EEAE+ VVK VSLA+ARDG
Sbjct: 131 GQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDG 190
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GV R FYPGD LPLWH+ELEPQNSLLD++ +P+PM
Sbjct: 191 ASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPQNSLLDILAAGNPDPM 241
>gi|66271073|gb|AAY43813.1| beta1 proteasome-7D [Aegilops tauschii]
gi|66271075|gb|AAY43814.1| beta1 proteasome-7D [Aegilops tauschii]
Length = 246
Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/171 (79%), Positives = 150/171 (87%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVA+NLVRLL+Y NK+ LQ GMIVGGWDKYEG
Sbjct: 74 AADTQVISDYVRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEG 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPFAIGGSGSSYLYG D WKEGMT+EEAE+ VVK VSLAIARDG
Sbjct: 134 GQIYSVPLGGTILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDG 193
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN EGV R F+PGD LPLWHEE+EPQNSLLD++ S + M
Sbjct: 194 ASGGVVRTVTINEEGVKRSFHPGDKLPLWHEEMEPQNSLLDILAAGSSDAM 244
>gi|226507970|ref|NP_001140374.1| uncharacterized protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 133/171 (77%), Positives = 153/171 (89%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDY+RYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 223 AADTQVISDYIRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 282
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI++QPFAIGGSGSSYLY D WKEGM++EEAE+ VVK VSLA+ARDG
Sbjct: 283 GQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDG 342
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GV R FYPGD LPLWH+ELEPQNSLLD++ +P+PM
Sbjct: 343 ASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPQNSLLDILAAGNPDPM 393
>gi|326519234|dbj|BAJ96616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 294 bits (753), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 136/171 (79%), Positives = 150/171 (87%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVA+NLVRLL+Y NK+ LQ GMIVGGWDKYEG
Sbjct: 74 AADTQIISDYVRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEG 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPFAIGGSGSSYLYG D WKEGMT+EEAE+ VVK VSLAIARDG
Sbjct: 134 GQIYSVPLGGTILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDG 193
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN EGV R F+PGD LPLWHEE+EPQNSLLD++ S + M
Sbjct: 194 ASGGVVRTVTINEEGVKRSFHPGDKLPLWHEEMEPQNSLLDILAAGSSDAM 244
>gi|242079721|ref|XP_002444629.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
gi|241940979|gb|EES14124.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
Length = 245
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/171 (77%), Positives = 152/171 (88%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 73 AADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 132
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI++QPFAIGGSGSSYLY D WKEGM++EEAE+ VVK VSLA+ARDG
Sbjct: 133 GQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDG 192
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GV R FYPGD LPLWH+ELEP +SLLD++ +P+PM
Sbjct: 193 ASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPHHSLLDILAAGNPDPM 243
>gi|326495934|dbj|BAJ90589.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/171 (78%), Positives = 150/171 (87%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVA+NLVRLL+Y NK+ LQ GMIVGGWDKYEG
Sbjct: 72 AADTQIISDYVRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPFAIGGSGSSYLYG D WKEGMT+EEAE+ VVK VSLAIARDG
Sbjct: 132 GQIYSVPLGGTILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN EGV R F+PGD LPLWHEE++PQNSLLD++ S + M
Sbjct: 192 ASGGVVRTVTINEEGVKRSFHPGDILPLWHEEMKPQNSLLDILAAGSSDAM 242
>gi|66271071|gb|AAY43812.1| beta1 proteasome-1D [Aegilops tauschii]
Length = 244
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/171 (78%), Positives = 149/171 (87%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVA+NLVRLL+Y NK+ LQ GMIVGGWDKYEG
Sbjct: 72 AADTQVISDYVRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPFAIGGSGSSYLYG D WKEGMT+EEAE+ VVK VSLAIARDG
Sbjct: 132 GQIYSVPLGGTILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN GV R F+PGD LPLWHEE+EPQNSLLD++ S + M
Sbjct: 192 ASGGVVRTVTINEAGVKRSFHPGDKLPLWHEEMEPQNSLLDILAAGSSDAM 242
>gi|242094606|ref|XP_002437793.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
gi|241916016|gb|EER89160.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
Length = 245
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 132/171 (77%), Positives = 152/171 (88%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVAANL+RLL+Y NKN LQ GMIVGGWDKYEG
Sbjct: 73 AADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEG 132
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+I+ VPLGGTI++QPFAIGGSGSSYLY D WKEGM++EEAE+ VVK VSLA+ARDG
Sbjct: 133 GQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDG 192
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
ASGGVVRTVTIN++GV R FYPGD LPLWH+ELEP +SLLD++ +P+PM
Sbjct: 193 ASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPHHSLLDILAAGNPDPM 243
>gi|116779982|gb|ABK21503.1| unknown [Picea sitchensis]
Length = 233
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/173 (80%), Positives = 154/173 (89%), Gaps = 1/173 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AADSQ VSDYVRYFLHQH IQLGQPATVKV ANL+RLLSYNNKN L+TG+IVGGWDKYE
Sbjct: 61 SAADSQVVSDYVRYFLHQHIIQLGQPATVKVTANLIRLLSYNNKNTLETGLIVGGWDKYE 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG IYGVPLGGT+++ PFAIGGSGSSYLYGF DQAWKEGM+K+EAE LVVK+VSLAIARD
Sbjct: 121 GGSIYGVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKEGMSKDEAEALVVKSVSLAIARD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMN 183
GASGGVVRTV INSEGV+R FYPGD LPLWHEEL +NSLL+ + + EPM+
Sbjct: 181 GASGGVVRTVVINSEGVTRNFYPGDKLPLWHEELPLRNSLLEEAS-SEAEPMH 232
>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
Length = 233
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/173 (79%), Positives = 152/173 (87%), Gaps = 1/173 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AADSQ VSDYVRYFLHQH IQLGQPATVKV ANL+RLLSYNNKN L+TG+IVGGWDKYE
Sbjct: 61 SAADSQVVSDYVRYFLHQHIIQLGQPATVKVTANLIRLLSYNNKNTLETGLIVGGWDKYE 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG IY VPLGGT+++ PFAIGGSGSSYLYGF DQAWK+GM+KEEAE LVVK VSLAIARD
Sbjct: 121 GGSIYSVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKDGMSKEEAEALVVKCVSLAIARD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMN 183
GASGGVVRTV INSEGV+R FYPGD LPLWHEEL +NSLL+ + + EPM+
Sbjct: 181 GASGGVVRTVVINSEGVTRNFYPGDKLPLWHEELPLRNSLLEEAS-SEAEPMH 232
>gi|257222616|gb|ACV52586.1| proteasome subunit beta type-6 precursor [Nicotiana benthamiana]
Length = 175
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/146 (91%), Positives = 141/146 (96%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK LQTGMI+GGWDKYEG
Sbjct: 30 AADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKAMLQTGMIIGGWDKYEG 89
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYGVPLGGT++EQPFAIGGSGSSYLYGFFDQAW+EGMT+EEAE+LVV AVSLAIARDG
Sbjct: 90 GKIYGVPLGGTLLEQPFAIGGSGSSYLYGFFDQAWREGMTQEEAEKLVVTAVSLAIARDG 149
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGGVVRTVTIN +GV+RKFYPGDTL
Sbjct: 150 ASGGVVRTVTINKDGVTRKFYPGDTL 175
>gi|41352683|gb|AAS01048.1| putative proteasome 20S beta1 subunit, partial [Brassica napus]
Length = 175
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/146 (89%), Positives = 140/146 (95%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDKYEG
Sbjct: 30 AADSQVVSDYVRYFLHQHTIQLGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEG 89
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWKE MTKEEAEQLVVKAVSLAIARDG
Sbjct: 90 GKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKENMTKEEAEQLVVKAVSLAIARDG 149
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGGVVRTV INSEGV+R FYPGD L
Sbjct: 150 ASGGVVRTVIINSEGVTRNFYPGDKL 175
>gi|41352685|gb|AAS01049.1| putative proteasome 20S beta1.1 subunit [Brassica napus]
Length = 172
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 138/143 (96%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDKYEG
Sbjct: 30 AADSQVVSDYVRYFLHQHTIQLGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEG 89
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWKE MTKEEAEQLVVKAVSLAIARDG
Sbjct: 90 GRIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKENMTKEEAEQLVVKAVSLAIARDG 149
Query: 132 ASGGVVRTVTINSEGVSRKFYPG 154
ASGGVVRTV INSEGV+R FYPG
Sbjct: 150 ASGGVVRTVIINSEGVTRNFYPG 172
>gi|118482133|gb|ABK92997.1| unknown [Populus trichocarpa]
Length = 227
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/132 (91%), Positives = 129/132 (97%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSY+NKN LQTGMI+GGWDKYEG
Sbjct: 65 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYSNKNMLQTGMIIGGWDKYEG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
GKIYGVPLGGT++E PF IGGSGS+YLYGFFDQAWKEGMT+EEAEQLVVKAVSLAIARDG
Sbjct: 125 GKIYGVPLGGTLLELPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARDG 184
Query: 132 ASGGVVRTVTIN 143
ASGGVVRTVT++
Sbjct: 185 ASGGVVRTVTVS 196
>gi|346465029|gb|AEO32359.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/138 (87%), Positives = 130/138 (94%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQL QPATVKVAANL+RLLSY NKN LQTG+IVGGWDKYEG
Sbjct: 62 AADSQVVSDYVRYFLHQHTIQLEQPATVKVAANLIRLLSYQNKNMLQTGLIVGGWDKYEG 121
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY VPLGGTI+ QPF IGGSGSSYLYGFFDQAWKEGM+K+EAE+LVVKAVSLAIARDG
Sbjct: 122 GQIYSVPLGGTILRQPFTIGGSGSSYLYGFFDQAWKEGMSKDEAEKLVVKAVSLAIARDG 181
Query: 132 ASGGVVRTVTINSEGVSR 149
ASGGVVRTV INS+GV+R
Sbjct: 182 ASGGVVRTVIINSDGVTR 199
>gi|167999091|ref|XP_001752251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696646|gb|EDQ82984.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 135/157 (85%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AADSQ VSDYVRYFL+QHTI LG+ ATVK A+ LV+ LSY NK+FL+TG+IV GWDKYE
Sbjct: 61 SAADSQVVSDYVRYFLNQHTILLGRLATVKTASTLVKELSYQNKSFLETGLIVAGWDKYE 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG +YG+PLGGT++ PFA GGSGSSYLYGF DQAWK MT+EEAE LVVK++SLAIARD
Sbjct: 121 GGSVYGIPLGGTLLRLPFATGGSGSSYLYGFLDQAWKSNMTQEEAEALVVKSISLAIARD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQ 167
GASGGVVRTVTIN EGV RKFY GD LPL+HEE+ P+
Sbjct: 181 GASGGVVRTVTINEEGVQRKFYAGDKLPLFHEEIAPR 217
>gi|302774543|ref|XP_002970688.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
gi|300161399|gb|EFJ28014.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
Length = 239
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 131/154 (85%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRY LHQHTI LG+ ATVK AA LVR ++Y+NK+FL+ GMIVGGWDK+E
Sbjct: 65 SAADTQVISDYVRYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEAGMIVGGWDKHE 124
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G I+GVP+GGT++ PF IGGSGS+Y++GF DQAW+ GM+K+EA+ LVVKAVSLA+ARD
Sbjct: 125 KGSIFGVPIGGTLLRVPFTIGGSGSTYIFGFLDQAWRPGMSKQEAQDLVVKAVSLAMARD 184
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
G SGGVVRTVTI+SEGV+R ++ D LP WHE++
Sbjct: 185 GGSGGVVRTVTISSEGVTRDYFSHDRLPKWHEDI 218
>gi|302771876|ref|XP_002969356.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
gi|300162832|gb|EFJ29444.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
Length = 239
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 130/154 (84%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRY LHQHTI LG+ ATVK AA LVR ++Y+NK+FL+ GMIVGGWDK+E
Sbjct: 65 SAADTQVISDYVRYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEAGMIVGGWDKHE 124
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G I+GVP+GGT++ PF IGGSGS+Y++GF DQAW+ GM+K+EA+ LVVKAVSLA+ARD
Sbjct: 125 KGSIFGVPIGGTLLRVPFTIGGSGSTYIFGFLDQAWRPGMSKQEAQDLVVKAVSLAMARD 184
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
G SGGVVRTVTI+S GV+R ++ D LP WHE++
Sbjct: 185 GGSGGVVRTVTISSAGVTRDYFSHDRLPKWHEDI 218
>gi|413942807|gb|AFW75456.1| hypothetical protein ZEAMMB73_794961 [Zea mays]
Length = 137
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 115/135 (85%)
Query: 48 LLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWK 107
+ N +N LQ GMIVGGWDKYEGG+I+ VPLGGTI++QPFAIGGSGSSYLY D WK
Sbjct: 1 MFGINIQNMLQAGMIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWK 60
Query: 108 EGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQ 167
EGM++EEAE+ VVK VSLA+ARDGASGGVVRTVTIN++GV R FYPGD LPLWH+ELEPQ
Sbjct: 61 EGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPQ 120
Query: 168 NSLLDMMNVASPEPM 182
NSLLD++ +P+PM
Sbjct: 121 NSLLDILAAGNPDPM 135
>gi|194466260|gb|ACF74359.1| threonine endopeptidase [Arachis hypogaea]
Length = 161
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 100/103 (97%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFL+TG+IVGGWDKYEG
Sbjct: 59 AADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEG 118
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 114
G+IYGVPLGGTI++QPFAIGGSGSSYLYGFFDQAWK MTK+E
Sbjct: 119 GQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKGRMTKDE 161
>gi|440802447|gb|ELR23376.1| beta1 proteasome1D, putative [Acanthamoeba castellanii str. Neff]
Length = 217
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++DYV++FL+QH+++LG+ V AANL + L Y NKNF+ +I
Sbjct: 58 IYCCRS-GSAADTQAIADYVKWFLNQHSVELGEEPEVGTAANLFKQLCYANKNFIMAAII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
VGG+DK+ GG +Y +PLGG++I++P+AIGGSGSSY+YG+ D +K GMTK+EA V A
Sbjct: 117 VGGYDKHNGGSVYSIPLGGSLIKEPWAIGGSGSSYIYGYCDANYKPGMTKDEALAFVQNA 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SLA++RDG+SGGV+RTVTI ++GV RK PG+ LP ++E+
Sbjct: 177 LSLAMSRDGSSGGVIRTVTITADGVERKMLPGNKLPQFYED 217
>gi|298708558|emb|CBJ30643.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 218
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 113/148 (76%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++DYVRYFL H+++LG+ VK AA + R L YNNK+ L GMI+ GWD +G
Sbjct: 69 AADTQAITDYVRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDG 128
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G +Y +PLGGT+++Q FAIGGSGS+Y+YG D A+KE MTKEEA+Q V KA+S A+ARDG
Sbjct: 129 GTVYEIPLGGTMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDG 188
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPL 159
+SGGV+R V I+ GVS ++ PGD LP
Sbjct: 189 SSGGVIRMVVIDKTGVSCEYIPGDQLPF 216
>gi|384247128|gb|EIE20616.1| proteasome-domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 236
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 113/158 (71%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +S YV+Y+LHQH ++L VK AA L L Y+NK LQ G+IV G+D EG
Sbjct: 71 AADTQAISSYVQYYLHQHQMELNDEILVKTAATLATKLVYSNKEMLQAGLIVAGYDSREG 130
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGGT+++ PF+IGGSGS+Y+YGF D+ W+ GM++E+ + VVKAV LA+ARDG
Sbjct: 131 GQVYALPLGGTLVKVPFSIGGSGSAYIYGFCDKNWRPGMSEEDCQAFVVKAVGLALARDG 190
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNS 169
+SGG +RTV I +GV R F P + +P + L Q S
Sbjct: 191 SSGGCIRTVVITKDGVRRSFLPNNKIPPAYGNLSFQGS 228
>gi|281201254|gb|EFA75466.1| hypothetical protein PPL_10970 [Polysphondylium pallidum PN500]
Length = 848
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 111/154 (72%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRY+L H +LG VK AA+L +LL YNNKN L G+IV GWDK+ G
Sbjct: 63 AADTQAISDYVRYYLEMHNSELGDDPDVKTAASLFQLLCYNNKNNLLAGIIVAGWDKHNG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G +Y + LGG++++QPFAIGGSGS+Y+YG+ D +K MTK+E + V +++LA+ RDG
Sbjct: 123 GSVYNISLGGSMVQQPFAIGGSGSTYIYGYCDSKFKPDMTKDECVEFVKNSLALAMFRDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+SGGV+R I+S GV R+ P + LP + EE E
Sbjct: 183 SSGGVIRLCVIDSNGVERRMIPANELPRFWEERE 216
>gi|307109183|gb|EFN57421.1| hypothetical protein CHLNCDRAFT_56068 [Chlorella variabilis]
Length = 217
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQT-----GMIVGG 65
AAD+Q +S YV++FL QH ++LG VK AA L + ++Y NKN LQ G+IV G
Sbjct: 50 SAADTQNLSRYVQWFLEQHGMELGDDPEVKTAAKLAQTMAYQNKNLLQASGGLAGLIVAG 109
Query: 66 WDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 125
WDK+ GG ++ +PLGGT+++ PF+IGGSGS+Y+ G D+ W+ M++EE + VVKAVS
Sbjct: 110 WDKHHGGSVFAIPLGGTLVKVPFSIGGSGSAYINGLCDRLWRPNMSEEECKAFVVKAVSH 169
Query: 126 AIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
A+ARDG+SGG +RTV I+ +G+ R F PGD +P+ EL P
Sbjct: 170 AMARDGSSGGCIRTVVISKDGIKRSFIPGDEVPVAAGELPP 210
>gi|348684993|gb|EGZ24808.1| hypothetical protein PHYSODRAFT_350003 [Phytophthora sojae]
Length = 637
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 108/148 (72%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRY+L H+++LG+ V AANL R L Y+NK+ L G+IV GWD +G
Sbjct: 488 AADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKG 547
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ +P+GG ++EQ FAIGGSGS+Y+YG D ++ MTKEE +Q V KA++ A+ARDG
Sbjct: 548 GQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPDMTKEECQQFVKKALAHAMARDG 607
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPL 159
+SGGV+RTVTI V R F GD LP
Sbjct: 608 SSGGVIRTVTITENEVVRDFTCGDDLPF 635
>gi|66827667|ref|XP_647188.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
gi|74897489|sp|Q55GJ6.1|PSB6_DICDI RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Differentiation-associated proteasome subunit 1;
Short=DAPS-1; Flags: Precursor
gi|60475212|gb|EAL73147.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
Length = 214
Score = 175 bits (443), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 110/152 (72%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRY+L HT +L VK AA+L +LL Y+NKN L G+IV GWDK++
Sbjct: 62 SAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQ 121
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG +Y + LGG++++QPFAIGGSGS+Y+YG+ D +K MTK+E + V +++LA+ RD
Sbjct: 122 GGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRD 181
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+R I+ GV RK PG+ LP + E
Sbjct: 182 GSSGGVIRLCIIDKNGVERKMIPGNNLPRFWE 213
>gi|328869271|gb|EGG17649.1| proteasome subunit beta type 6 [Dictyostelium fasciculatum]
Length = 214
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 108/151 (71%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRY+L HT +L VK AA+L +LL YNNKN L G+IV GWDK +G
Sbjct: 63 AADTQAISDYVRYYLEMHTQELDDQPVVKTAASLFQLLCYNNKNNLMAGIIVAGWDKDKG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G +Y + LGG++I+QPFA+ GSGS+YLYG D +K GMTKEE + V A++LA+ RDG
Sbjct: 123 GSVYNISLGGSMIKQPFAMSGSGSTYLYGHCDAQFKPGMTKEECVKFVQNALALAMFRDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
+SGGV+R I+ E V R+ PG+ LP + E
Sbjct: 183 SSGGVIRLCIIDKENVERRTIPGNQLPRFWE 213
>gi|325181392|emb|CCA15808.1| proteasome subunit beta type6 putative [Albugo laibachii Nc14]
Length = 216
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 108/149 (72%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRYFL H++ +G+ V AANL R L YNNK+ L G+IV GWD
Sbjct: 66 SAADTQALSDYVRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVH 125
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +P+GG +++Q FAIGGSGS+Y+YG D A++ MT+EE + V K ++ A+ARD
Sbjct: 126 GGQVYSIPIGGAMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARD 185
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G+SGGV+RTVTI + V+R+F G+ LP
Sbjct: 186 GSSGGVIRTVTITKDSVTREFTSGEQLPF 214
>gi|301118843|ref|XP_002907149.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
gi|262105661|gb|EEY63713.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
Length = 673
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 109/148 (73%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRY+L H+++LG+ V AANL R L Y+NK+ L G+IV GWD +G
Sbjct: 524 AADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKG 583
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ +P+GG ++EQ FAIGGSGS+Y+YG D ++ MTKEE ++ V KA++ A+ARDG
Sbjct: 584 GQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDG 643
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPL 159
+SGGV+RTVTI V R+F G+ LP
Sbjct: 644 SSGGVIRTVTITENEVVREFTSGEDLPF 671
>gi|301104168|ref|XP_002901169.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
gi|262101103|gb|EEY59155.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
Length = 218
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 109/149 (73%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRY+L H+++LG+ V AANL R L Y+NK+ L G+IV GWD +
Sbjct: 68 SAADTQALSDYVRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVK 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+++ +P+GG ++EQ FAIGGSGS+Y+YG D ++ MTKEE ++ V KA++ A+ARD
Sbjct: 128 GGQVFSIPIGGAMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARD 187
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G+SGGV+RTVTI V R+F G+ LP
Sbjct: 188 GSSGGVIRTVTITENEVVREFTSGEDLPF 216
>gi|32400975|gb|AAP80693.1| proteasome subunit [Griffithsia japonica]
Length = 220
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDY RY+L H I+LG+ V+ A L L Y+NK L +IVGG+D +G
Sbjct: 69 AADTQIISDYCRYYLSMHHIELGEDPRVETTARLFNQLCYHNKEMLMASIIVGGYDARKG 128
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ +PLGG +I+QPF IGGSGSSY+YG+ D +KEGM+K+E + V A+SLA+ARDG
Sbjct: 129 GQVFSIPLGGALIKQPFTIGGSGSSYIYGYCDANFKEGMSKDECIEFVKNALSLAMARDG 188
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP-LW 160
+SGGV+R V I+ +G SR+F GD LP W
Sbjct: 189 SSGGVIRLVVIDKDGASRQFIHGDKLPQFW 218
>gi|330800977|ref|XP_003288508.1| proteasome subunit beta type 6 [Dictyostelium purpureum]
gi|325081468|gb|EGC34983.1| proteasome subunit beta type 6 [Dictyostelium purpureum]
Length = 207
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 108/152 (71%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRY+L HT +L VK AA+L +LL Y+NKN L G+IV GWDK++
Sbjct: 55 SAADTQAISDYVRYYLEMHTSELCDDPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQ 114
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG +Y + LGG++++QPFAIGGSGS+Y+YG+ D +K GMTKEE + V +++LA+ RD
Sbjct: 115 GGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPGMTKEECVEFVKNSLALAMFRD 174
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+R I+ G R+ P LP + E
Sbjct: 175 GSSGGVIRLCIIDKNGPERRMIPATELPRFWE 206
>gi|384249780|gb|EIE23261.1| proteasome subunit [Coccomyxa subellipsoidea C-169]
Length = 227
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 116/159 (72%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++DYVR++ H+++LG+ +K A LV ++Y+NKN L MIVGGWD
Sbjct: 61 SAADTQAIADYVRHYTAMHSMELGRDPKIKSVAKLVAQINYSNKNLLMGAMIVGGWDPEG 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+I+GVP+ GT+++Q + GSGS+Y++G+ D A+++GM++EEAE+LV A++LA++RD
Sbjct: 121 GGQIFGVPISGTLVQQDWTTDGSGSTYIWGYLDSAYRDGMSREEAEELVKTALALAMSRD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNS 169
G+SGG+ R +TI G R+ GD +PL+ +E+EP +
Sbjct: 181 GSSGGLARLITITKAGAERRMIKGDEIPLFWDEIEPMGT 219
>gi|397641738|gb|EJK74825.1| hypothetical protein THAOC_03479 [Thalassiosira oceanica]
Length = 235
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++DYVR++L Q ++ G+P VKVAA+L+R L Y NK+ L G+
Sbjct: 74 HIWCCRS-GSAADTQALTDYVRHYLAQLAVETGRPPEVKVAAHLMRRLCYENKDNLMAGV 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWD GG ++ +PLGG++I PFAIGGSGS+++YG D +KE M++E+A LV K
Sbjct: 133 IVGGWDPVNGGSVFNIPLGGSMIPMPFAIGGSGSTFIYGLVDSEFKENMSEEDALALVKK 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
AVS A+ARDG+SGG+VRTV +G +R + G+ LP
Sbjct: 193 AVSHAMARDGSSGGIVRTVVATEDGNTRDYISGNRLP 229
>gi|379994355|gb|AFD22804.1| proteasome subunit beta type 6, partial [Collodictyon triciliatum]
Length = 182
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 105/150 (70%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++DYVR+++ H+++LG+ VKVAANL R+++Y+NKN L G+IV G+D
Sbjct: 33 SAADTQVLTDYVRHYIKLHSLELGEEPEVKVAANLFRMMAYHNKNHLMAGLIVAGYDARH 92
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + LGG + EQP A GGSGS+Y++GF D ++ T+EE E+ V A+SLAI RD
Sbjct: 93 GPSVYNISLGGAVCEQPLAAGGSGSTYIFGFLDSNYRPDFTREECEKFVATAISLAIHRD 152
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
G+SGGV R +T+N +G +R G+ L W
Sbjct: 153 GSSGGVCRLLTVNKDGATRTLIKGNELARW 182
>gi|405951012|gb|EKC18961.1| Proteasome subunit beta type-6 [Crassostrea gigas]
Length = 218
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V Y L+ + +G+ VKVAAN+ R L YNN++ L G+I
Sbjct: 58 IYCCRS-GSAADTQAVADIVSYHLNFQKMDMGEEPKVKVAANIFRELCYNNRDNLSAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
VGGWDK EGG++Y +PLGG + PF GGSGS+Y+YG+ D +K GMTKEE + V
Sbjct: 117 VGGWDKTEGGQVYAIPLGGMLTRMPFTTGGSGSTYIYGYVDANFKTGMTKEECLKFVANG 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
V LAI+RDG+SGGVVR IN +GV R G+ +P ++E+
Sbjct: 177 VGLAISRDGSSGGVVRLAAINKDGVERFVLTGNQVPTFYED 217
>gi|219115083|ref|XP_002178337.1| proteasome beta subunit [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410072|gb|EEC50002.1| proteasome beta subunit [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 109/149 (73%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++DYV+++L Q T++ G+P VK AA+L++ L Y NK+ L G+IV GWD +
Sbjct: 72 SAADTQALTDYVKFYLQQLTVETGRPPRVKTAAHLMQRLCYENKDNLMAGVIVAGWDPVD 131
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG +Y +PLGGT ++ PFA+ GSGS+Y+YG D + + ++ ++A LV KA+S A+ARD
Sbjct: 132 GGSVYSIPLGGTCLKVPFALSGSGSTYIYGLVDSEYNDSLSLQDARTLVKKAISHAMARD 191
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G+SGG++RTV + SEG +R + PG+ LP
Sbjct: 192 GSSGGIIRTVAVTSEGNNRDYTPGNQLPF 220
>gi|167521337|ref|XP_001745007.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776621|gb|EDQ90240.1| predicted protein [Monosiga brevicollis MX1]
Length = 216
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++D VRY+L H++++ + V AA++ R YNN+ L G+
Sbjct: 56 NIYCCRS-GSAADTQAIADIVRYYLDLHSMEMDEDPEVHTAASVFRTFCYNNRESLMAGI 114
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I GWDK +GG++Y +PLGG ++ QPF+IGGSGS++LYG D ++KE MTK+E + V
Sbjct: 115 ICAGWDKKKGGQVYSIPLGGLLVRQPFSIGGSGSTFLYGHCDASYKENMTKDECLKFVRT 174
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
A++LA++RDG+SGGV+RT I GV R+ G+ LP ++E
Sbjct: 175 ALALAMSRDGSSGGVIRTAVITEAGVEREVVLGNELPTFYE 215
>gi|82621739|gb|ABB86551.1| proteosome PSMB6/9 protein [Branchiostoma lanceolatum]
Length = 235
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y H+I++G+P V+ AANL + L Y ++ L G+
Sbjct: 75 RIFCCRS-GSAADTQAIADIVSYHTSFHSIEIGEPPLVRTAANLFKDLCYRHREDLTAGI 133
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWDK +GG++Y VPLGG ++ QP AIGGSGS+Y+YG+ D +KEGMTKEE Q
Sbjct: 134 IVGGWDKRKGGQVYSVPLGGMLVRQPVAIGGSGSTYVYGYVDSHFKEGMTKEECFQFCAN 193
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA+ RDG+SGGV+R I +G+ RK GD +P + E
Sbjct: 194 TLALAMFRDGSSGGVIRLAAITEDGIERKVITGDDIPKFWE 234
>gi|260793274|ref|XP_002591637.1| hypothetical protein BRAFLDRAFT_114609 [Branchiostoma floridae]
gi|229276846|gb|EEN47648.1| hypothetical protein BRAFLDRAFT_114609 [Branchiostoma floridae]
Length = 232
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 105/152 (69%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y H+I++G+P V+ AANL + L Y ++ L G+IV GWDK +
Sbjct: 80 SAADTQAIADIVSYHTSFHSIEVGEPPLVRTAANLFKDLCYRHREDLTAGIIVAGWDKRK 139
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y VPLGG ++ QP AIGGSGS+Y+YG+ D +KEGMTKEE Q ++LA+ RD
Sbjct: 140 GGQVYSVPLGGMLVRQPVAIGGSGSTYVYGYVDSHFKEGMTKEECFQFCANTLALAMFRD 199
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+R IN +G+ RK GD +P + E
Sbjct: 200 GSSGGVIRLAAINEDGIERKVITGDDIPKFWE 231
>gi|224000415|ref|XP_002289880.1| 20S proteasome subunit beta type 6 precursor [Thalassiosira
pseudonana CCMP1335]
gi|220975088|gb|EED93417.1| 20S proteasome subunit beta type 6 precursor [Thalassiosira
pseudonana CCMP1335]
Length = 207
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++DYVR++L Q ++ G+ VKVAA+L+R L Y NK+ L G+
Sbjct: 46 HIWCCRS-GSAADTQALTDYVRHYLAQLAVETGRVPEVKVAAHLMRRLCYENKDNLMAGV 104
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWD GG +Y +PLGG I PFAIGGSGS+++YG D +KE M+KEEA L K
Sbjct: 105 IVGGWDPVSGGSVYNIPLGGACIPMPFAIGGSGSTFIYGLVDSEYKEAMSKEEALLLCKK 164
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
AVS A+ARDG+SGG++RTV EG +R G+ LP
Sbjct: 165 AVSHAMARDGSSGGIIRTVVATEEGNARDHVLGNNLP 201
>gi|388851885|emb|CCF54479.1| probable PRE3-20S proteasome subunit (beta1) [Ustilago hordei]
Length = 222
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y+L + ++ G P KVAANL + + Y NK+ L G+I
Sbjct: 61 IYCCRS-GSAADTQAIADIVTYYLDMYAVESGAPPQTKVAANLFQEIVYQNKDRLSAGII 119
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK +GG+++ VPLGG + EQP+AIGGSGS+Y+YG+ D WK G KE+ + V A
Sbjct: 120 VAGWDKKDGGRVFNVPLGGGVFEQPWAIGGSGSTYIYGYCDATWKAGWGKEKTIEFVKNA 179
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
++LA+ RDG+SGG +R V I +GV R F PGD LP
Sbjct: 180 LALAMRRDGSSGGTIRLVDITEDGVERHFVPGDQLP 215
>gi|291000907|ref|XP_002683020.1| 20S proteasome [Naegleria gruberi]
gi|284096649|gb|EFC50276.1| 20S proteasome [Naegleria gruberi]
Length = 251
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 109/150 (72%), Gaps = 3/150 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SDYVRYFL H++++G V+ AANL + YN K+ L G+I GWD+ G
Sbjct: 97 AADTQQISDYVRYFLQIHSVEVGTLPLVETAANLFKDFCYNYKDNLLAGIICAGWDEKNG 156
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G ++ +PLGG++I++PF+IGGSGS+Y+YG+ D +K+GMTKEE +Q V A+SLA+ARDG
Sbjct: 157 GSVWTIPLGGSLIKEPFSIGGSGSTYIYGYCDANFKKGMTKEECKQFVRNALSLAMARDG 216
Query: 132 ASGGVVRTVTINSEGVSRKFY---PGDTLP 158
+SGGVVR I +GV R+ + G TLP
Sbjct: 217 SSGGVVRLAVITKDGVEREVHHEGQGGTLP 246
>gi|3116216|dbj|BAA25923.1| proteasome subunit [Dictyostelium discoideum]
Length = 213
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SDYVRY+L HT +L VK AA L +LL Y+NKN L G+IV GWDK++
Sbjct: 62 SAADTQAISDYVRYYLEMHTSELCDEPDVKTAACLFQLLCYSNKNNLMAGIIVAGWDKHQ 121
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + LGG++++QPFAIGGSGS+Y+YG+ D +K MTK+ + V +++LA+ RD
Sbjct: 122 G-SVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDRCIEFVQNSLALAMFRD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+R I+ GV RK PG+ LP + E
Sbjct: 181 GSSGGVIRLCIIDKNGVERKMIPGNNLPRFWE 212
>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
Length = 212
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 110/154 (71%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++ YV++F+ QH + G+ VK AANLV++++YNNK+ LQ G+IV G+DK+
Sbjct: 50 SAADTQAIAGYVQHFIAQHQAEEGEHINVKTAANLVKMMAYNNKDNLQAGLIVAGYDKHG 109
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+++ + LGGTI E FA+ GSGS+Y+ GF D+ W+EGM+++EA V KA+ A+ D
Sbjct: 110 GGQVFSISLGGTITETSFAMSGSGSTYINGFVDKYWREGMSEQEAMDFVTKALRYAMTWD 169
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
+SGG +RTVTI + GV R F PG +P + EL
Sbjct: 170 ASSGGCMRTVTITASGVKRTFIPGSDIPPTYGEL 203
>gi|326435830|gb|EGD81400.1| proteasome subunit beta type-6 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 108/152 (71%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D VRY+L H++++ + V VAA++ R YNN++ L G+I G+D+++
Sbjct: 68 SAADTQAIADIVRYYLELHSVEIDEEPRVGVAASIFREFCYNNRDQLTAGIICAGFDEHK 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG ++ QPFAIGGSGS++LYG D +KEGM K+E V A++LA++RD
Sbjct: 128 GGQVYSIPLGGLVVRQPFAIGGSGSTFLYGHCDSTFKEGMAKDECLTFVRNALALAMSRD 187
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+RT I +GV R GD LP +++
Sbjct: 188 GSSGGVIRTAVITKDGVERDVVLGDALPTFYQ 219
>gi|390338377|ref|XP_003724763.1| PREDICTED: proteasome subunit beta type-6-like [Strongylocentrotus
purpuratus]
Length = 233
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 104/152 (68%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L H+I +P V AANL R Y+ ++ L G+IVGGWDK +
Sbjct: 81 SAADTQAIADIVSYLLEFHSINQNEPPLVHTAANLFRNRCYDYRDSLLAGIIVGGWDKEK 140
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y VPLGG + QP AIGGSGS+Y+YG+ D +KEGM+K+E Q V AVSLA+ RD
Sbjct: 141 GGQVYSVPLGGMFVRQPCAIGGSGSTYIYGYVDAHYKEGMSKDECLQFVSNAVSLAMFRD 200
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGG+VR I +GV RK G+ LP ++E
Sbjct: 201 GSSGGIVRLAVITEDGVERKTILGNELPRFYE 232
>gi|452819220|gb|EME26285.1| 20S proteasome subunit beta 1 [Galdieria sulphuraria]
Length = 227
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 107/152 (70%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++DYVRY+L H + L VK AA++ R L Y+NK+ L G+I GWD G
Sbjct: 76 AADTQAIADYVRYYLSIHQLDLDDLPCVKTAASICRELCYSNKDRLLAGIICAGWDPLYG 135
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGGT+I QP++IGGSGS+Y+YGF D +++GM++E+ KAV+LA+ARDG
Sbjct: 136 GQVYTIPLGGTMIRQPYSIGGSGSTYIYGFCDAHFQKGMSREQCIDFTKKAVALAMARDG 195
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+R V I +GV R+ G+ LP+ E
Sbjct: 196 SSGGVIRLVVIEKQGVWREMIAGNQLPVISAE 227
>gi|443897309|dbj|GAC74650.1| permease of the drug/metabolite transporter [Pseudozyma antarctica
T-34]
Length = 222
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y+L + +Q G P KVAANL + + Y NK+ L G+I
Sbjct: 61 IYCCRS-GSAADTQAIADIVTYYLDMYAVQSGNPVETKVAANLFQEIVYGNKDRLSAGII 119
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK GG ++ +PLGG + +QP+AIGGSGS+Y+YG+ D WK G KE+ + V A
Sbjct: 120 VAGWDKQNGGSVFNIPLGGGVFQQPWAIGGSGSTYIYGYCDATWKAGWGKEKTLEFVKNA 179
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
++LA+ RDG+SGG +R V I+ +GV R F PGD LP
Sbjct: 180 LALAMRRDGSSGGTIRLVDISEDGVERHFVPGDQLP 215
>gi|156387836|ref|XP_001634408.1| predicted protein [Nematostella vectensis]
gi|156221491|gb|EDO42345.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 104/152 (68%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L+ H+I++ +P VK AANL R + Y ++ L G+I GWDK
Sbjct: 45 SAADTQAIADIVKYHLNFHSIEMEEPVLVKTAANLFREMCYGYRDQLSAGIICAGWDKLN 104
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG I QPF IGGSGS+Y+YG D +K GM+KEE V AV+LA++RD
Sbjct: 105 GGQVYSIPLGGMCIRQPFTIGGSGSTYIYGHCDATYKSGMSKEECFNFVKTAVALAMSRD 164
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGG++R I+ GV R+ G+ LP ++E
Sbjct: 165 GSSGGIIRMAGIDETGVERRVILGNELPTFYE 196
>gi|320164621|gb|EFW41520.1| proteasome subunit beta type-6 [Capsaspora owczarzaki ATCC 30864]
Length = 223
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++DYV+Y+L H+I+LG+ +V AA++ + L Y N+ L G+
Sbjct: 63 RIYCCRS-GSAADTQAIADYVKYYLDLHSIELGERPSVHSAASVFQQLCYGNRENLMAGI 121
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG++Y +PLGG + QPF+IGGSGS+Y++G D +K GMT+ E E V
Sbjct: 122 IVAGWDRKLGGQVYTIPLGGMCLRQPFSIGGSGSTYIFGHVDATFKLGMTQAECEDFVKG 181
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
A++LA+ARDG+SGGVVR TI GV RK + GD +P + E
Sbjct: 182 ALALAMARDGSSGGVVRIATITESGVERKTFVGDQIPKFWE 222
>gi|346472801|gb|AEO36245.1| hypothetical protein [Amblyomma maculatum]
Length = 242
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R A+D+Q ++D V Y + + + +G+PA V+ AAN+ R L YN+++ L G+
Sbjct: 82 RIYCCRS-GSASDTQAIADIVTYHVGLYEMVMGEPAKVETAANIFRELCYNHRDQLVAGI 140
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I GWD++ GG++Y VPLGG ++ QP A+GGSGS+YLYG+ D +K GMTKEE V K
Sbjct: 141 ICAGWDRHNGGQVYMVPLGGMLMRQPVAMGGSGSTYLYGYVDANYKPGMTKEECLSFVTK 200
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
A+SLAI RDG+SGGV+R I +GV RK GD +P +++
Sbjct: 201 AISLAIVRDGSSGGVIRLGVITKDGVERKVLTGDEIPQFYQ 241
>gi|343427158|emb|CBQ70686.1| probable PRE3-20S proteasome subunit (beta1) [Sporisorium reilianum
SRZ2]
Length = 222
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 105/157 (66%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y+L ++++ P KVAA+L + + Y NK+ L G+
Sbjct: 60 RIYCCRS-GSAADTQAIADIVTYYLDMYSVESDSPPQTKVAASLFQEIVYQNKDRLSAGI 118
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +GG+++ VPLGG + EQP+AIGGSGS+Y+YG+ D WK G KE+ + V
Sbjct: 119 IVAGWDKKDGGRVFNVPLGGGVFEQPWAIGGSGSTYIYGYCDATWKAGWGKEQTLEFVKN 178
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A+SLA+ RDG+SGG +R V I GV R F PGD LP
Sbjct: 179 ALSLAMRRDGSSGGTIRLVDITEHGVQRHFVPGDQLP 215
>gi|71005512|ref|XP_757422.1| hypothetical protein UM01275.1 [Ustilago maydis 521]
gi|46096905|gb|EAK82138.1| hypothetical protein UM01275.1 [Ustilago maydis 521]
Length = 222
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y+L + ++ P KVAANL + + Y NK+ L G+I
Sbjct: 61 IYCCRS-GSAADTQAIADIVTYYLDMYAVESDSPPQTKVAANLFQEIVYQNKDRLSAGII 119
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK +GG+++ VPLGG + EQP+AIGGSGS+Y+YG+ D WK G K + + V A
Sbjct: 120 VAGWDKKDGGRVFNVPLGGGVFEQPWAIGGSGSTYIYGYCDATWKAGWGKHQTIEFVKNA 179
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
++LA+ RDG+SGG +R V I +GV R F PGD LP
Sbjct: 180 LALAMRRDGSSGGTIRLVDITEDGVERHFVPGDQLP 215
>gi|193716235|ref|XP_001951926.1| PREDICTED: proteasome subunit beta type-6-like [Acyrthosiphon
pisum]
Length = 243
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++D V Y++ +IQ+ +P V+ AAN+ + L Y N++ L G+
Sbjct: 65 NIYCCRS-GSAADTQAITDIVAYYMDLTSIQMDEPPLVRAAANVFKNLIYENRHQLTAGV 123
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD GG++Y + + GTI++Q +IGGSGSSYLYGF D +K+GMT++E E LV+
Sbjct: 124 IVAGWDSRFGGQVYSINVSGTIVQQNISIGGSGSSYLYGFMDSQYKDGMTQQECENLVLN 183
Query: 122 AVSLAIARDGASGGVVRTVTINSEG-VSRKFYPGDTLPLWHEEL 164
A+SLAI RDG+SGGVVR IN G + RK GD LP +++ +
Sbjct: 184 AISLAIKRDGSSGGVVRMGVINHTGQIQRKLTLGDQLPKFYDNI 227
>gi|239788939|dbj|BAH71121.1| ACYPI009408 [Acyrthosiphon pisum]
Length = 243
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++D V Y++ +IQ+ +P V+ AAN+ + L Y N++ L G+
Sbjct: 65 NIYCCRS-GSAADTQAITDIVAYYMDLTSIQMDEPPLVRAAANVFKNLIYENRHQLTAGV 123
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD GG++Y + + GTI++Q +IGGSGSSYLYGF D +K+GMT++E E LV+
Sbjct: 124 IVAGWDSRFGGQVYSINVSGTIVQQNISIGGSGSSYLYGFMDSQYKDGMTQQECENLVLN 183
Query: 122 AVSLAIARDGASGGVVRTVTINSEG-VSRKFYPGDTLPLWHEEL 164
A+SLAI RDG+SGGVVR IN G + RK GD LP +++ +
Sbjct: 184 AISLAIKRDGSSGGVVRMGVINHTGQIQRKLTLGDQLPKFYDNI 227
>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380244|sp|O43063.1|PSB1_SCHPO RecName: Full=Probable proteasome subunit beta type-1; Flags:
Precursor
gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe]
Length = 226
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+QTV+D ++Y+L + IQ G +V AA L + Y NKN L G+
Sbjct: 64 NIWCCRS-GSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGL 122
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV G+D+ GG +Y +PLGG++ +QP AIGGSGS+++YGF D ++E MT+EEA + +
Sbjct: 123 IVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKN 182
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AV+LA+ RDG+SGG +R V +N +G+ RKF+ DT
Sbjct: 183 AVALAMERDGSSGGTIRMVILNKDGMERKFFAIDT 217
>gi|302828808|ref|XP_002945971.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
gi|300268786|gb|EFJ52966.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
Length = 223
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 107/153 (69%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++ YV++F+ QH + G TVK AANLV++++YNNK+ +Q G+IV G+DKY G
Sbjct: 64 AADTQAIAGYVQHFIAQHQAEEGDHVTVKTAANLVKMMAYNNKDIMQAGLIVAGFDKYGG 123
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y + LGGTI PF++ GSGS+Y+ GF D+ W+E M++EEA V +A+ A+ D
Sbjct: 124 GQVYSISLGGTITATPFSMSGSGSTYINGFCDKYWRENMSEEEAMDFVTRALRYAMTWDA 183
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
+SGG +RTVTI + G R+F G + + EL
Sbjct: 184 SSGGCIRTVTITAAGTKRQFIQGSLIQPTYGEL 216
>gi|291237252|ref|XP_002738545.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
isoform 1 [Saccoglossus kowalevskii]
Length = 233
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 106/152 (69%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AA +Q V+D V Y L+ H+I++ +P VK AANL + + YN ++ L G+I GWD+ E
Sbjct: 81 SAAATQAVADIVSYHLNFHSIEMNEPPLVKTAANLFKEMCYNYRDELTAGIICAGWDERE 140
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG ++ QPF+IGGSGS+Y+YG+ D ++K+ MTKEE + +++LA+ RD
Sbjct: 141 GGQVYTIPLGGMLLRQPFSIGGSGSTYIYGYVDSSFKKDMTKEECLKFCAHSLALAMNRD 200
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGVVR I EGV R G+ LP ++E
Sbjct: 201 GSSGGVVRLAAITKEGVERHVILGNELPRFYE 232
>gi|2055301|dbj|BAA19761.1| proteasome subunit Y [Lethenteron camtschaticum]
Length = 231
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I++ + V AANL + Y + L G+
Sbjct: 71 RIFCCRS-GSAADTQAIADVVNYQLGFHSIEMEEMPLVHTAANLFKDYCYRYREELMAGI 129
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +GG++Y VPLGG ++ QPF++GGSGS+Y+YGF D +K GMTKEE + K
Sbjct: 130 IVAGWDKRKGGQVYTVPLGGMLVRQPFSVGGSGSTYIYGFVDSNYKTGMTKEECMEFTAK 189
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
A+SLA++RDG+SGGV+R I + GV R+ G +P ++EE
Sbjct: 190 ALSLAMSRDGSSGGVIRMAAITAGGVERRVLTGKDIPTFYEE 231
>gi|393245969|gb|EJD53478.1| 20S proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 241
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V Y+L Q G+P +V VAA L + Y NK+ L G+I
Sbjct: 53 IYCCRS-GSAADTQAVADIVHYYLQMFAQQAGEPPSVHVAATLFNKMCYENKDNLLAGII 111
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +P+GG + QP+AIGGSGS+Y+YG+ D +++ MT+EE Q V
Sbjct: 112 VAGWDKEVGASVYNIPVGGGLFRQPWAIGGSGSTYVYGYCDATYRDNMTQEETIQFVKNT 171
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
++LA++RDG+SGGV+R I EGV R F PGD LP + E E
Sbjct: 172 LALAMSRDGSSGGVIRMCVITEEGVERLFVPGDQLPRFWEGKE 214
>gi|221123833|ref|XP_002155191.1| PREDICTED: proteasome subunit beta type-6-like [Hydra
magnipapillata]
Length = 234
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++D VRY L H + G+ A VK AANL R + Y ++ G+
Sbjct: 74 NIFCCRS-GSAADTQAIADQVRYELDMHMAESGRQALVKTAANLFRNVCYERRDSASAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ EGG++Y VP+GG + QPF+IGGSGS+Y+YG D + +GM+K+E + V
Sbjct: 133 IVAGWDEREGGQVYSVPIGGMCLRQPFSIGGSGSTYIYGHCDSTFVKGMSKDECIKFVTN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP-LWH 161
AV+LAI RDG+SGG +R IN +GV RK G+ +P W
Sbjct: 193 AVALAIFRDGSSGGCIRLAIINKDGVERKVILGNEIPTFWQ 233
>gi|395533603|ref|XP_003768845.1| PREDICTED: proteasome subunit beta type-6 [Sarcophilus harrisii]
Length = 239
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 106/159 (66%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AANL + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLSFHSIELNEPPLVHTAANLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD YEGG++Y VP+GG ++ QPF+IGGSGSSY+YG+ D +++EGM +++ Q
Sbjct: 133 IVAGWDPYEGGQVYSVPMGGMMVRQPFSIGGSGSSYIYGYVDASYQEGMNEKQCLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I +GV R+ GD LP +
Sbjct: 193 ALALAMERDGSSGGVIRLAAITEKGVERQVLMGDQLPRF 231
>gi|77735687|ref|NP_001029541.1| proteasome subunit beta type-6 precursor [Bos taurus]
gi|108860907|sp|Q3MHN0.1|PSB6_BOVIN RecName: Full=Proteasome subunit beta type-6; Flags: Precursor
gi|75948245|gb|AAI05177.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Bos taurus]
gi|296476732|tpg|DAA18847.1| TPA: proteasome subunit beta type-6 precursor [Bos taurus]
Length = 239
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ QPFAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAEPGVERQVLLGDQIP 229
>gi|90077008|dbj|BAE88184.1| unnamed protein product [Macaca fascicularis]
Length = 202
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 37 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GGT++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 96 IIAGWDPQEGGQVYSVPMGGTMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I GV R+ GD +P +
Sbjct: 156 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIPKF 194
>gi|426237420|ref|XP_004012658.1| PREDICTED: proteasome subunit beta type-6 [Ovis aries]
Length = 239
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ QPFAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAEPGVERQVLLGDQIP 229
>gi|294893111|ref|XP_002774336.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239879674|gb|EER06152.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 290
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 104/149 (69%), Gaps = 2/149 (1%)
Query: 12 AADSQTVSDYVRYFLHQHT--IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q +S V+YFL+ H + L + VK AANL+RLL+YNNK +L G+IV GWD+
Sbjct: 142 AADTQFLSSKVKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQT 201
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
EG ++Y +PLGGTII+Q A GGSGS+Y+ G D ++ M++EEAE V KAV+ A+AR
Sbjct: 202 EGPQVYSIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMAR 261
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLP 158
DG+SGGV+R T+ + V+ K D +P
Sbjct: 262 DGSSGGVIRVTTVTEKDVAEKCLYADKIP 290
>gi|440897065|gb|ELR48837.1| Proteasome subunit beta type-6, partial [Bos grunniens mutus]
Length = 232
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 67 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 125
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ QPFAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 126 IIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 185
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 186 ALALAMERDGSSGGVIRLAAIAEPGVERQVLLGDQIP 222
>gi|225714818|gb|ACO13255.1| Proteasome subunit beta type-6 precursor [Esox lucius]
Length = 231
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V+ AANL + + Y + L G+
Sbjct: 71 HIFCCRP-GSAADTQAVADAVTYQLGFHSIELDEPPLVQTAANLFKQMCYRYREELMAGI 129
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +GG++Y VP+GG I+ QP ++GGSGSSY+YGF D +K GMTKEE +
Sbjct: 130 IVAGWDKRKGGQVYTVPMGGMIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQ 189
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV R I +GV R+ G+ LP
Sbjct: 190 ALTLAMERDGSSGGVARLAAITEDGVERRVVLGNQLP 226
>gi|321464090|gb|EFX75100.1| hypothetical protein DAPPUDRAFT_306867 [Daphnia pulex]
Length = 225
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 106/153 (69%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L H +QLG+ VK AA++ + L YN ++ L G+I GWD+
Sbjct: 73 SAADTQAIADIVNYHLEFHEVQLGEAPLVKTAASVFQELCYNYRDQLTAGIICAGWDRRH 132
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+++ +PLGG + Q FAIGGSGS+Y++GF D +K+GM K+E Q V+K ++LA++RD
Sbjct: 133 GGQVFNIPLGGMCVRQSFAIGGSGSTYVFGFVDSNFKKGMIKDECVQFVLKTLALAMSRD 192
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGVVR I +G+ R+ G+ LP ++E+
Sbjct: 193 GSSGGVVRLGIITEDGIERRTVLGNELPRFYED 225
>gi|432090757|gb|ELK24087.1| Proteasome subunit beta type-6 [Myotis davidii]
Length = 238
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 73 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 132 IVAGWDSQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R +I+ GV R+ GD +P
Sbjct: 192 ALALAMERDGSSGGVIRLASISESGVERQVLLGDQIP 228
>gi|126309277|ref|XP_001370876.1| PREDICTED: proteasome subunit beta type-6-like [Monodelphis
domestica]
Length = 246
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 106/165 (64%), Gaps = 1/165 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AANL + + Y + L G+
Sbjct: 81 RIFCCRS-GSAADTQAVADAVTYQLSFHSIELNEPPLVHTAANLFKEMCYRYREDLMAGI 139
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ QPF+IGGSGSSY+YG+ D +++EGM +++ Q
Sbjct: 140 IVAGWDPREGGQVYSVPMGGMMVRQPFSIGGSGSSYIYGYVDASYREGMNEKQCLQFTAN 199
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
A++LA+ RDG+SGGV+R I +GV R+ GD LP + P
Sbjct: 200 ALALAMDRDGSSGGVIRLAAITEKGVERQVLMGDQLPQFPSTTYP 244
>gi|307190437|gb|EFN74473.1| Proteasome subunit beta type-6 [Camponotus floridanus]
Length = 229
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L H ++LG P V+ AAN+ R + YN ++ L G++
Sbjct: 70 IYCCRS-GSAADTQAIADIVAYHLGLHQMELGTPPLVETAANVFREICYNYRDSLMAGIL 128
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK +GG++Y +P+GG + QP +IGGSGS+Y+YG+ D +K M K+E +LV
Sbjct: 129 VAGWDKQKGGQVYSIPIGGMCVRQPISIGGSGSTYVYGYVDAQYKSNMPKDECLKLVENT 188
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA+ARDG+SGGV+RT I +G+ RK G+ LP ++E
Sbjct: 189 LALAMARDGSSGGVIRTGVITEKGIERKVILGNELPRFYE 228
>gi|145356837|ref|XP_001422631.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582874|gb|ABP00948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 232
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 106/165 (64%), Gaps = 9/165 (5%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPAT---------VKVAANLVRLLSYNNKNFLQTGM 61
AAD+Q V+ YV +H + + A VK+ ANL + ++Y NK+ LQ GM
Sbjct: 60 SAADTQNVAAYVSRLAQEHAVSVSSAAAGADEVLTCDVKLVANLTKTIAYENKDRLQAGM 119
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD+ G ++YG+PLGG+++E PF +GGSGS+Y+YG+ D +KE M+KEEA+ V
Sbjct: 120 IIAGWDRKLGPQVYGIPLGGSMVEAPFTVGGSGSAYVYGWCDDTFKEDMSKEEAQAWVTN 179
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
A+SLAIARD +SGGV+R VTI+ +G RK L +EL P
Sbjct: 180 AISLAIARDASSGGVIRLVTIDGKGCERKMLQPIEHVLCDDELPP 224
>gi|294889671|ref|XP_002772914.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239877494|gb|EER04730.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHT--IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 68
AAD+Q +S V+YFL+ H + L + VK AANL+RLL+YNNK +L G+IV GWD+
Sbjct: 55 SAADTQFLSSKVKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQ 114
Query: 69 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
EG ++Y +PLGGTII+Q A GGSGS+Y+ G D ++ M++EEAE V KAV+ A+A
Sbjct: 115 TEGPQVYSIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMA 174
Query: 129 RDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
RDG+SGGV+R T+ + V+ K D +P
Sbjct: 175 RDGSSGGVIRVTTVTEKDVAEKCLYADKIP 204
>gi|332030043|gb|EGI69868.1| Proteasome subunit beta type-6 [Acromyrmex echinatior]
Length = 197
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L H ++LG P V+ AAN+ R + YN ++ L G++V GWDK +
Sbjct: 45 SAADTQAIADIVAYHLGLHQMELGTPPLVETAANVFREICYNYRDSLMAGILVAGWDKQK 104
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +P+GG + QP +IGGSGS+Y+YG+ D +K M+K+E LV ++LA+ARD
Sbjct: 105 GGQVYSIPIGGMCVRQPISIGGSGSTYVYGYVDAQYKSNMSKDECLGLVENTLALAMARD 164
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+RT I +G+ RK G+ LP ++E
Sbjct: 165 GSSGGVIRTGVITEKGIERKVILGNELPRFYE 196
>gi|209733028|gb|ACI67383.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L H+I+L +P V+ AANL + Y + L G+IV GWDK G
Sbjct: 81 AADTQAVADIVTYQLGFHSIELDEPPLVQTAANLFKQTCYRYREELMAGIIVAGWDKRRG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG I+ QP ++GGSGSSY+YGF D +K GMTKEE +A++LA+ RDG
Sbjct: 141 GQVYTVPMGGMIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERDG 200
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV R I EG+ R+ G+ LP
Sbjct: 201 SSGGVARLAAITEEGLERRVVLGNQLP 227
>gi|444722976|gb|ELW63648.1| Proteasome subunit beta type-6 [Tupaia chinensis]
Length = 239
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IVAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|410979655|ref|XP_003996197.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Felis catus]
Length = 239
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIEESGVERRVLLGDQIP 229
>gi|209732878|gb|ACI67308.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L H+I+L +P V+ AANL + Y + L G+IV GWDK G
Sbjct: 81 AADTQAVADIVTYQLGFHSIELDEPPLVQTAANLFKQTCYRYREELMAGIIVAGWDKRRG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG I+ QP ++GGSGSSY+YGF D +K GMTKEE +A++LA+ RDG
Sbjct: 141 GQVYTVPMGGMIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERDG 200
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV R I EG+ R+ G+ LP
Sbjct: 201 SSGGVARLAAITEEGLERRVVLGNQLP 227
>gi|409049925|gb|EKM59402.1| hypothetical protein PHACADRAFT_249865 [Phanerochaete carnosa
HHB-10118-sp]
Length = 236
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V Y L T Q G P +V VAAN+ + + Y NK+ L G+I
Sbjct: 57 IYCCRS-GSAADTQAVADAVHYNLQMITQQFGHPPSVSVAANVFQRICYENKDALSAGII 115
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK EG +Y +PLGG + QP+AIGGSGS+Y+YG+ D +++G +++ + V
Sbjct: 116 VAGWDKEEGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQDGWNRDQTVEFVKNT 175
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA++RDG+SGGV+R I EGV R F PG+ LP + E
Sbjct: 176 LALAMSRDGSSGGVIRMCVITREGVERVFIPGNELPRFWE 215
>gi|307106214|gb|EFN54460.1| hypothetical protein CHLNCDRAFT_31571 [Chlorella variabilis]
Length = 225
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+DYVRYF QH +QL + V+ A LVR ++Y K+ + MIV GWD+ EG
Sbjct: 66 AADTQAVADYVRYFTEQHEMQLQRTPGVRTVAQLVREMNYQYKHLVGA-MIVAGWDEDEG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG P+GGTI +P+ GSGS++++GF D +K+GM +++AE LV A++LA++RDG
Sbjct: 125 GQVYGCPIGGTISREPWTTDGSGSTFIWGFLDSEFKDGMGRQDAEDLVAMALALAMSRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
+SGGV+R VT++ EG +R+ + P++ +E+
Sbjct: 185 SSGGVIRLVTVSKEGATRRLITPEEHPVFWDEI 217
>gi|344259274|gb|AEN03334.1| proteasome subunit beta type 6 [Sus scrofa]
gi|344259276|gb|AEN03335.1| proteasome subunit beta type 6 [Sus scrofa]
Length = 239
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IVAGWDPQEGGQVYSVPMGGMMVRQAFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|346716138|ref|NP_001138398.2| proteasome subunit beta type-6 [Sus scrofa]
Length = 241
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 76 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 134
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 135 IVAGWDPQEGGQVYSVPMGGMMVRQAFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 194
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 195 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 231
>gi|296734|emb|CAA43963.1| macropain subunit delta [Homo sapiens]
Length = 180
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 99/147 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EG
Sbjct: 24 AADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEG 83
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q A++LA+ RDG
Sbjct: 84 GQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDG 143
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV+R I GV R+ GD +P
Sbjct: 144 SSGGVIRLAAIAESGVERQVLLGDQIP 170
>gi|73955410|ref|XP_849241.1| PREDICTED: proteasome subunit beta type-6 [Canis lupus familiaris]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|384489923|gb|EIE81145.1| proteasome subunit beta type-6 [Rhizopus delemar RA 99-880]
Length = 224
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 104/148 (70%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y+L +++ + +V+ A+ L + L Y NK+ L G+IV GWD+ +
Sbjct: 69 SAADTQAIADIVHYYLQMYSVNEDEAPSVRTASALFQELCYQNKDNLMAGIIVAGWDEKD 128
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y VPLGG++ + PFAIGGSGS+Y+YG+ D +K+ MT+EE E+ V +++LA++RD
Sbjct: 129 GPSVYNVPLGGSLHKAPFAIGGSGSTYIYGYCDAKYKDDMTREECEEFVKNSLALAMSRD 188
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
G+SGGV+R I +GV R F PG+ LP
Sbjct: 189 GSSGGVIRMAVITKDGVERLFVPGNQLP 216
>gi|332257645|ref|XP_003277915.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Nomascus
leucogenys]
gi|402898362|ref|XP_003912192.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Papio anubis]
gi|402898364|ref|XP_003912193.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Papio anubis]
gi|402898366|ref|XP_003912194.1| PREDICTED: proteasome subunit beta type-6 isoform 3 [Papio anubis]
gi|402898368|ref|XP_003912195.1| PREDICTED: proteasome subunit beta type-6 isoform 4 [Papio anubis]
gi|441662335|ref|XP_004091589.1| PREDICTED: proteasome subunit beta type-6 [Nomascus leucogenys]
gi|441662338|ref|XP_004091590.1| PREDICTED: proteasome subunit beta type-6 [Nomascus leucogenys]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|149724885|ref|XP_001504802.1| PREDICTED: proteasome subunit beta type-6-like [Equus caballus]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IVAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|302831986|ref|XP_002947558.1| hypothetical protein VOLCADRAFT_57026 [Volvox carteri f.
nagariensis]
gi|300267422|gb|EFJ51606.1| hypothetical protein VOLCADRAFT_57026 [Volvox carteri f.
nagariensis]
Length = 242
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 113/154 (73%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
A D+Q +SD VR++L+ + G+ +V++AANLVRL++YNNK+ L M+V GWDK+
Sbjct: 65 SAPDTQIISDNVRHYLNHMIAESGEEPSVEMAANLVRLINYNNKDHLVGAMLVVGWDKHG 124
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+++G P+GGT++++ +AI GSGS+Y++G+ D +KEGMT+EEAE V +A++LA+ RD
Sbjct: 125 GGQVFGAPIGGTLVKEKWAIDGSGSTYIWGYCDSEFKEGMTREEAENWVKEALALAMTRD 184
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
+SGG +R +T++ G + GD +P + +++
Sbjct: 185 ASSGGTIRIITLDGTGAHHTYVRGDQVPQFVDDM 218
>gi|380798123|gb|AFE70937.1| proteasome subunit beta type-6, partial [Macaca mulatta]
Length = 218
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 53 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 111
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 112 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 171
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 172 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 208
>gi|355753644|gb|EHH57609.1| hypothetical protein EGM_07288 [Macaca fascicularis]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|291405211|ref|XP_002718873.1| PREDICTED: proteasome beta 6 subunit [Oryctolagus cuniculus]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|358060701|dbj|GAA93640.1| hypothetical protein E5Q_00284 [Mixia osmundae IAM 14324]
Length = 233
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 2/177 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLG-QPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L HT+Q G QP +V AA L + L Y NK+ L G+
Sbjct: 58 IYCCRS-GSAADTQAVADIVHYHLQMHTMQHGNQPPSVHTAATLFQSLCYGNKDQLSAGI 116
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +G +Y +PLGG + + P+AIGGSGS+Y+YGF D ++ G +K++ V
Sbjct: 117 IVAGWDKIDGASVYNIPLGGGLFKAPWAIGGSGSTYIYGFCDSNYRPGWSKQQTVDFVRN 176
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVAS 178
A++LA++RDG+SGG +R I GV R F PG+ LPL+ L M +A+
Sbjct: 177 ALALAMSRDGSSGGTIRMAIIEESGVERLFVPGNELPLFGPALWANEQAGKSMEIAA 233
>gi|336373469|gb|EGO01807.1| hypothetical protein SERLA73DRAFT_48294 [Serpula lacrymans var.
lacrymans S7.3]
Length = 232
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 2/171 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V ++L Q++ Q G P V +AA + + L Y NK+ L G+IV GWDK G
Sbjct: 61 AADTQAVADIVHFYLQQYSQQSGTPPPVHIAAAVFQKLCYENKDALSAGIIVAGWDKDVG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG ++E V +SLA++RDG
Sbjct: 121 PSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWGRDETVNFVKNTLSLAMSRDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
+SGGV+R I EGV R F PGD LP + E E + V P PM
Sbjct: 181 SSGGVIRMCVITEEGVERLFVPGDQLPKFWEGREVLGAA--AKKVLEPVPM 229
>gi|296202288|ref|XP_002748328.1| PREDICTED: proteasome subunit beta type-6 [Callithrix jacchus]
gi|403279806|ref|XP_003931435.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|307611968|ref|NP_001182643.1| proteasome (prosome, macropain) subunit, beta type, 6 [Macaca
mulatta]
gi|355568119|gb|EHH24400.1| hypothetical protein EGK_08055 [Macaca mulatta]
Length = 239
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|21465649|pdb|1IRU|H Chain H, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465663|pdb|1IRU|V Chain V, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 205
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 40 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 98
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 99 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 158
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 159 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 195
>gi|297699722|ref|XP_002826924.1| PREDICTED: proteasome subunit beta type-6 [Pongo abelii]
Length = 239
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|336386293|gb|EGO27439.1| hypothetical protein SERLADRAFT_360169 [Serpula lacrymans var.
lacrymans S7.9]
Length = 239
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 2/171 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V ++L Q++ Q G P V +AA + + L Y NK+ L G+IV GWDK G
Sbjct: 68 AADTQAVADIVHFYLQQYSQQSGTPPPVHIAAAVFQKLCYENKDALSAGIIVAGWDKDVG 127
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG ++E V +SLA++RDG
Sbjct: 128 PSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWGRDETVNFVKNTLSLAMSRDG 187
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
+SGGV+R I EGV R F PGD LP + E E + V P PM
Sbjct: 188 SSGGVIRMCVITEEGVERLFVPGDQLPKFWEGREVLGAA--AKKVLEPVPM 236
>gi|149053200|gb|EDM05017.1| rCG33991, isoform CRA_b [Rattus norvegicus]
Length = 205
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 40 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 98
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 99 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 158
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 159 ALALAMERDGSSGGVIRLAAIQQSGVERQVLLGDQIP 195
>gi|114665820|ref|XP_511290.2| PREDICTED: proteasome subunit beta type-6 isoform 3 [Pan
troglodytes]
gi|332847027|ref|XP_003315370.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
gi|397477772|ref|XP_003810243.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Pan paniscus]
gi|397477774|ref|XP_003810244.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Pan paniscus]
gi|397477776|ref|XP_003810245.1| PREDICTED: proteasome subunit beta type-6 isoform 3 [Pan paniscus]
gi|410050910|ref|XP_003952994.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
Length = 239
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|431893962|gb|ELK03768.1| Proteasome subunit beta type-6 [Pteropus alecto]
Length = 239
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|148680629|gb|EDL12576.1| mCG21162, isoform CRA_a [Mus musculus]
Length = 205
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 40 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 98
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 99 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 158
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 159 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIP 195
>gi|426383645|ref|XP_004058389.1| PREDICTED: proteasome subunit beta type-6 isoform 1 [Gorilla
gorilla gorilla]
gi|426383647|ref|XP_004058390.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Gorilla
gorilla gorilla]
Length = 239
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|281352167|gb|EFB27751.1| hypothetical protein PANDA_013817 [Ailuropoda melanoleuca]
Length = 238
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|301778105|ref|XP_002924515.1| PREDICTED: proteasome subunit beta type-6-like [Ailuropoda
melanoleuca]
Length = 239
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|23110925|ref|NP_002789.1| proteasome subunit beta type-6 isoform 1 proprotein [Homo sapiens]
gi|20532407|sp|P28072.4|PSB6_HUMAN RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Macropain delta chain; AltName: Full=Multicatalytic
endopeptidase complex delta chain; AltName:
Full=Proteasome delta chain; AltName: Full=Proteasome
subunit Y; Flags: Precursor
gi|12654059|gb|AAH00835.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|32879961|gb|AAP88811.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|48146247|emb|CAG33346.1| PSMB6 [Homo sapiens]
gi|60654877|gb|AAX32003.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654879|gb|AAX32004.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654881|gb|AAX32005.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654883|gb|AAX32006.1| proteasome subunit beta type 6 [synthetic construct]
gi|119610813|gb|EAW90407.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|123980626|gb|ABM82142.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
gi|123995447|gb|ABM85325.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
gi|189053089|dbj|BAG34711.1| unnamed protein product [Homo sapiens]
gi|208967174|dbj|BAG73601.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
Length = 239
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|348538008|ref|XP_003456484.1| PREDICTED: proteasome subunit beta type-6-like [Oreochromis
niloticus]
Length = 233
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 105/157 (66%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q +++ V Y L H+I+L +P V+ AANL R Y + L G+
Sbjct: 73 KIYCCRS-GSAADTQAIAEIVAYQLGFHSIELDEPPLVETAANLFRASCYRYREELTAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWDK +GG++Y VP+GG ++ QP ++GGSGS+Y+YGF D +K GM KE+ +L
Sbjct: 132 LVAGWDKRKGGQVYSVPIGGMLVRQPVSVGGSGSTYIYGFMDANYKPGMNKEQCMELTAA 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A+SLA+ RDG+SGGVVR +I+ EGV R+ G+ LP
Sbjct: 192 ALSLAMERDGSSGGVVRLASISEEGVERRVILGNQLP 228
>gi|984938|gb|AAA75375.1| delta proteasome subunit [Mus musculus]
Length = 202
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 37 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 96 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I GV R+ GD +P +
Sbjct: 156 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIPKF 194
>gi|286248|dbj|BAA01586.1| proteasome subunit R-DELTA [Rattus sp.]
Length = 202
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 37 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 96 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 156 ALALAMERDGSSGGVIRLAAIQQSGVERQVLLGDQIP 192
>gi|238231384|ref|NP_032972.3| proteasome subunit beta type-6 precursor [Mus musculus]
gi|84028244|sp|Q60692.3|PSB6_MOUSE RecName: Full=Proteasome subunit beta type-6; AltName: Full=Low
molecular mass protein 19; AltName: Full=Macropain delta
chain; AltName: Full=Multicatalytic endopeptidase
complex delta chain; AltName: Full=Proteasome delta
chain; AltName: Full=Proteasome subunit Y; Flags:
Precursor
gi|26347247|dbj|BAC37272.1| unnamed protein product [Mus musculus]
gi|74189010|dbj|BAE39271.1| unnamed protein product [Mus musculus]
gi|74191020|dbj|BAE39351.1| unnamed protein product [Mus musculus]
gi|148680630|gb|EDL12577.1| mCG21162, isoform CRA_b [Mus musculus]
gi|745475|prf||2016287A housekeeping proteasome:SUBUNIT=2
Length = 238
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 73 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 132 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 192 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIP 228
>gi|2118156|pir||I49121 proteasome endopeptidase complex (EC 3.4.25.1) delta chain - mouse
gi|984940|gb|AAA75376.1| delta proteasome subunit [Mus musculus]
Length = 202
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 37 HIFCCRS-GSAADTQAVTDAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 96 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I GV R+ GD +P +
Sbjct: 156 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIPKF 194
>gi|378792316|pdb|3UNB|N Chain N, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792330|pdb|3UNB|BB Chain b, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792344|pdb|3UNB|PP Chain p, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792358|pdb|3UNB|4 Chain 4, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792372|pdb|3UNE|N Chain N, Mouse Constitutive 20s Proteasome
gi|378792386|pdb|3UNE|BB Chain b, Mouse Constitutive 20s Proteasome
gi|378792400|pdb|3UNE|PP Chain p, Mouse Constitutive 20s Proteasome
gi|378792414|pdb|3UNE|4 Chain 4, Mouse Constitutive 20s Proteasome
Length = 205
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 40 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 98
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 99 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 158
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 159 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIP 195
>gi|54019419|ref|NP_476440.2| proteasome subunit beta type-6 [Rattus norvegicus]
gi|84028245|sp|P28073.3|PSB6_RAT RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Macropain delta chain; AltName: Full=Multicatalytic
endopeptidase complex delta chain; AltName:
Full=Proteasome chain 5; AltName: Full=Proteasome delta
chain; AltName: Full=Proteasome subunit Y; Flags:
Precursor
gi|37231619|gb|AAH58451.1| Proteasome (prosome, macropain) subunit, beta type 6 [Rattus
norvegicus]
gi|149053199|gb|EDM05016.1| rCG33991, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 73 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 132 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 192 ALALAMERDGSSGGVIRLAAIQQSGVERQVLLGDQIP 228
>gi|293357141|ref|XP_002729074.1| PREDICTED: proteasome subunit beta type-6 [Rattus norvegicus]
gi|392338679|ref|XP_003753602.1| PREDICTED: proteasome subunit beta type-6 [Rattus norvegicus]
gi|47169486|tpe|CAE48380.1| TPA: proteasome subunit beta type 6-like [Rattus norvegicus]
gi|149048484|gb|EDM01025.1| rCG63409 [Rattus norvegicus]
Length = 238
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 73 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 132 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 192 ALALAMERDGSSGGVIRLAAIQQSGVERQVLLGDQIP 228
>gi|156554577|ref|XP_001601920.1| PREDICTED: proteasome subunit beta type-6-like [Nasonia
vitripennis]
Length = 231
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 107/160 (66%), Gaps = 1/160 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R +AD+Q +SD V Y L H ++LG V+ AAN+ R L YN ++ L G++
Sbjct: 72 IYCCRS-GSSADTQAISDIVNYHLGFHRMELGMEPRVETAANVFRELCYNYRDSLMAGIL 130
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWD +GG++Y VPLGG + QP +IGGSGSSY+YG+ D +K GMTK++ +LV
Sbjct: 131 VAGWDSVKGGQVYSVPLGGMCLRQPISIGGSGSSYVYGYVDANYKPGMTKDQTIELVTNT 190
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA++RDG+SGGV+R I +G+ RK G+ LP ++E
Sbjct: 191 LALAMSRDGSSGGVIRLGVITDKGIERKVILGNQLPKFYE 230
>gi|383850393|ref|XP_003700780.1| PREDICTED: proteasome subunit beta type-6-like isoform 1 [Megachile
rotundata]
Length = 232
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 105/152 (69%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +SD V Y L+ + +++G V+ AAN+ R L YN ++ L G++V GWD +
Sbjct: 80 SAADTQAISDIVAYDLNLYKMEVGMEPLVETAANVFRELCYNYRDSLMAGILVAGWDNRK 139
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + QP +IGGSGS+Y+YG+ D +K M++EE E+LV ++LA+ARD
Sbjct: 140 GGQVYSIPLGGMCVRQPISIGGSGSTYVYGYMDSQYKPNMSREECEKLVENTLALAMARD 199
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+R I +G+ RK G+ LP ++E
Sbjct: 200 GSSGGVIRMGVITEKGIERKVILGNNLPRFYE 231
>gi|348561057|ref|XP_003466329.1| PREDICTED: proteasome subunit beta type-6-like [Cavia porcellus]
Length = 239
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D +++GMTKEE Q
Sbjct: 133 IVAGWDPQEGGQVYSVPMGGMLVRQSFAIGGSGSSYIYGYVDATYRKGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
A++LA+ RDG+SGGV+R I GV R+ GD +P + P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIEEAGVERQVLLGDQIPKFTIATSP 237
>gi|308810972|ref|XP_003082794.1| putative beta 1 subunit of 20S proteasome (ISS) [Ostreococcus
tauri]
gi|116054672|emb|CAL56749.1| putative beta 1 subunit of 20S proteasome (ISS) [Ostreococcus
tauri]
Length = 265
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 108/162 (66%), Gaps = 9/162 (5%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL---------GQPATVKVAANLVRLLSYNNKNFLQTGMI 62
AAD+Q V+ YV +H + + G VK+ AN+ + ++Y NK+ LQ GMI
Sbjct: 98 AADTQNVAAYVSRLAQEHAVSVSSAGADADEGIKCDVKLVANITQKIAYQNKDRLQAGMI 157
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
+ G+D+ G ++YG+PLGG ++E PF +GGSGS+Y+YG+ D ++E M+KEEA+ V +A
Sbjct: 158 IAGYDRKLGPQVYGIPLGGAMMENPFTVGGSGSAYIYGWCDDTFRENMSKEEAQAWVKRA 217
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
+SLAIARD +SGGV+R VTI++ GVSR+ PL EEL
Sbjct: 218 ISLAIARDASSGGVIRLVTIDATGVSRQMIQPIEQPLCDEEL 259
>gi|209735834|gb|ACI68786.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V+ AANL + Y + L G+
Sbjct: 72 RIFCCRS-GSAADTQAVADIVTYQLGFHSIELDEPPLVQTAANLFKQTCYRYREELMAGI 130
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK GG+++ VP+GG I+ QP ++GGSGSSY+YGF D +K GMTKEE +
Sbjct: 131 IVAGWDKRRGGQVHTVPMGGMIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQ 190
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV R I EG+ R+ G+ LP
Sbjct: 191 ALALAMERDGSSGGVARLAAITEEGLERRVVLGNQLP 227
>gi|307206411|gb|EFN84449.1| Proteasome subunit beta type-6 [Harpegnathos saltator]
Length = 197
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 109/161 (67%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++D V Y L H ++LG V+ AAN+ R + YN ++ L G+
Sbjct: 37 HIYCCRS-GSAADTQAITDIVAYHLGLHQMELGAQPLVETAANVFREICYNYRDSLMAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWDK +GG++Y +P+GG + QP +IGGSGS+Y+YG+ D +K MTKEE+ +LV
Sbjct: 96 LVAGWDKQKGGQVYSIPIGGMCVRQPISIGGSGSTYVYGYVDAQYKSNMTKEESLKLVEN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA+ RDG+SGGV+RT I+ +G+ R G+ LP ++E
Sbjct: 156 TLALAMTRDGSSGGVIRTGVISEKGIERNVILGNELPRFYE 196
>gi|225708064|gb|ACO09878.1| Proteasome subunit beta type 6 precursor [Osmerus mordax]
Length = 231
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L H+I+L + V+ AANL + + Y + L G+IV GWDK G
Sbjct: 80 AADTQAVADAVTYQLGFHSIELDEAPLVQTAANLFKQMCYRYREELMAGIIVAGWDKRRG 139
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG ++ QP ++GGSGSSY+YGF D +K GMTKEE +A++LA+ RDG
Sbjct: 140 GQVYTVPMGGMLVRQPVSVGGSGSSYIYGFMDSNYKTGMTKEECLHFTTQALALAMERDG 199
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV R I EGV R+ G+ LP
Sbjct: 200 SSGGVARLAAITEEGVERRVVLGNQLP 226
>gi|417397665|gb|JAA45866.1| Putative proteasome beta 6 subunit [Desmodus rotundus]
Length = 239
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGM KEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMAKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R +I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLASIEESGVERQVLLGDQIP 229
>gi|344290109|ref|XP_003416781.1| PREDICTED: proteasome subunit beta type-6-like [Loxodonta africana]
Length = 211
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 46 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 104
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE
Sbjct: 105 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLHFTAN 164
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 165 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 201
>gi|340370033|ref|XP_003383551.1| PREDICTED: hypothetical protein LOC100632145 [Amphimedon
queenslandica]
Length = 1522
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V+Y L +I+L + VK AA+ R Y ++ G++ GWDK G
Sbjct: 77 AADTQAIADAVKYNLQLLSIELNEAPLVKTAAHFFRQYCYKYRDNCTAGILCAGWDKRSG 136
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG I QPFAIGGSGS+YLYG+ D +K GM KEE+ + V +V+LAI+RDG
Sbjct: 137 GQVYSIPLGGMCIRQPFAIGGSGSTYLYGYCDAHFKTGMNKEESIEFVKNSVALAISRDG 196
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGVVR I+ +GV R + G +P
Sbjct: 197 SSGGVVRIAVISEDGVERLLFTGKDIP 223
>gi|395836618|ref|XP_003791250.1| PREDICTED: proteasome subunit beta type-6 [Otolemur garnettii]
Length = 239
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 102/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE +
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLEFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|170091950|ref|XP_001877197.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164648690|gb|EDR12933.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 234
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y+L T G P +V AA L + L Y NK+ L G+
Sbjct: 52 RIYCCRS-GSAADTQAVADIVHYYLQMFTQTSGAPPSVHTAAALFQKLCYENKDALSAGI 110
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK G +Y +P+GG + QP+AIGGSGS+Y+YG+ D +KEG +EE + V
Sbjct: 111 IVAGWDKDAGPSVYNIPVGGGMFRQPWAIGGSGSTYVYGYCDATYKEGWGREETVEFVRN 170
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEP 181
++LA++RDG+SGGV+R I + V R F PGD LP + E E + ++V P P
Sbjct: 171 TLALAMSRDGSSGGVIRMCVITEDKVERLFVPGDQLPKFWEGREIVGGAVKKLDV-DPIP 229
Query: 182 M 182
M
Sbjct: 230 M 230
>gi|148228778|ref|NP_001081217.1| proteasome subunit Y [Xenopus laevis]
gi|76779604|gb|AAI06526.1| LOC397716 protein [Xenopus laevis]
Length = 233
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L P V AANL + + Y + L G+
Sbjct: 73 RIFCCRS-GSAADTQAIADAVTYQLGFHSIELDGPPLVHTAANLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +GG++Y VP+GG ++ Q F+IGGSGSSY+YGF D ++ GMTKEE +
Sbjct: 132 IVAGWDKRKGGQVYTVPMGGMLVHQQFSIGGSGSSYIYGFVDSTYRPGMTKEECLKFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I EGV R+ G+ LP +
Sbjct: 192 ALALAMERDGSSGGVIRLAAITEEGVERQVILGNQLPRF 230
>gi|2055299|dbj|BAA19760.1| proteasome subunit Y [Xenopus laevis]
Length = 230
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L P V AANL + + Y + L G+
Sbjct: 70 RIFCCRS-GSAADTQAIADAVTYQLGFHSIELDGPPLVHTAANLFKEMCYRYREDLMAGI 128
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +GG++Y VP+GG ++ Q F+IGGSGSSY+YGF D ++ GMTKEE +
Sbjct: 129 IVAGWDKRKGGQVYTVPMGGMLVHQQFSIGGSGSSYIYGFVDSTYRPGMTKEECLKFTAN 188
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I EGV R+ G+ LP +
Sbjct: 189 ALALAMERDGSSGGVIRLAAITEEGVERQVILGNQLPRF 227
>gi|340382010|ref|XP_003389514.1| PREDICTED: proteasome subunit beta type-6-like [Amphimedon
queenslandica]
Length = 229
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 102/154 (66%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +I+L + VK AA+ R Y ++ G++ GWDK
Sbjct: 76 SAADTQAIADAVKYNLQLLSIELNEAPLVKTAAHFFRQYCYKYRDNCTAGILCAGWDKRS 135
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG I QPFAIGGSGS+YLYG+ D +K GM KEE+ + V +V+LAI+RD
Sbjct: 136 GGQVYSIPLGGMCIRQPFAIGGSGSTYLYGYCDAHFKAGMNKEESIEFVKNSVALAISRD 195
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
G+SGGVVR I+ +GV R + G +P ++ ++
Sbjct: 196 GSSGGVVRIAVISEDGVERLLFTGKDIPQYNTDM 229
>gi|432867841|ref|XP_004071304.1| PREDICTED: proteasome subunit beta type-6-like [Oryzias latipes]
Length = 232
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q +++ V Y L H+I+L +P V+ AA+L R Y + L G+
Sbjct: 72 RIYCCRS-GSAADTQAIAEVVSYQLGFHSIELDEPPLVETAAHLFRASCYRYREELMAGI 130
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWD+ +GG++Y VP+GG ++ QP ++GGSGSSY+YGF D +K G++K++ L K
Sbjct: 131 LVAGWDRRKGGQVYCVPIGGMLVRQPVSVGGSGSSYIYGFMDSNYKPGLSKDQCLDLTTK 190
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGVVR TI+ +GV R+ GD LP
Sbjct: 191 ALTLAMERDGSSGGVVRLATISEDGVERRVILGDQLP 227
>gi|384501791|gb|EIE92282.1| proteasome subunit beta type-6 [Rhizopus delemar RA 99-880]
Length = 211
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 102/148 (68%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y+L +++ + TV+ A L + L Y NK+ L G+IV GWD+ +
Sbjct: 59 SAADTQAIADIVHYYLQMYSVNEDEVPTVRTAGALFQELCYQNKDHLMAGIIVAGWDEKD 118
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y VPLGG++ + PFAIGGSGS+Y+YG+ D +K+ M++EE + V +++LA++RD
Sbjct: 119 GPSVYNVPLGGSLHKAPFAIGGSGSTYIYGYCDAKYKDDMSREECIEFVKNSLALAMSRD 178
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
G+SGGV+R I EGV R F PG+ LP
Sbjct: 179 GSSGGVIRMAVITKEGVERLFVPGNELP 206
>gi|226468552|emb|CAX69953.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
japonicum]
gi|226484696|emb|CAX74257.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
japonicum]
Length = 218
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 100/150 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QTV+D VRY L H +++ + TV AA + YN ++ L G+IV GWD+ G
Sbjct: 67 AADTQTVADMVRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYRDDLVAGIIVAGWDEQSG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY +PLGG +I QP IGGSGS+Y YG+ D +++GMT+EE V+K V+LAI RDG
Sbjct: 127 GQIYSIPLGGMLIRQPIVIGGSGSTYTYGYVDHDFRKGMTREECINFVLKGVALAINRDG 186
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
+SGG +R I+ +GV R GD +P++
Sbjct: 187 SSGGCIRLAIISKDGVERILTKGDEVPVYR 216
>gi|443696644|gb|ELT97307.1| hypothetical protein CAPTEDRAFT_156053 [Capitella teleta]
Length = 231
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 100/147 (68%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SD V Y L H +L + V A++ + L YN ++ L G+I GWDK +G
Sbjct: 80 AADTQAISDIVSYHLSVHKAELNEEPLVHTGASIFQDLCYNYRDQLSAGIICAGWDKRKG 139
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG + PF+IGGSGS+YLYG+ D A+KE MTKEE ++ V+ AV+LAI RDG
Sbjct: 140 GQVYSIPLGGMCVRVPFSIGGSGSTYLYGWVDSAFKEKMTKEECQKFVLNAVTLAINRDG 199
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGG+ TI+ +GV R+ + D LP
Sbjct: 200 SSGGICNLATISVDGVERQKFLHDDLP 226
>gi|148227692|ref|NP_001079339.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Xenopus laevis]
gi|2055297|dbj|BAA19759.1| LMP2 [Xenopus laevis]
gi|213623168|gb|AAI69381.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Xenopus laevis]
gi|213624900|gb|AAI69377.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Xenopus laevis]
Length = 215
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y + H+I++ P V AANL++ +SY K + +IV GWD+
Sbjct: 64 SAADAQAVADMAHYHMEVHSIEMEAPPLVLAAANLIKGISYKYKEEIMAHLIVAGWDRKH 123
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG II QPF IGGSGS+Y+YGF D +K GM++EE E+ V+A+SLA+ RD
Sbjct: 124 GGQVYGT-LGGMIIRQPFTIGGSGSTYIYGFVDSKFKPGMSREECERFAVQALSLAMERD 182
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
G+SGGV+ VT+ EG GD++P ++
Sbjct: 183 GSSGGVIYLVTVTKEGTKDSIISGDSIPRFY 213
>gi|58262948|ref|XP_568884.1| hypothetical protein CNB03070 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108160|ref|XP_777278.1| hypothetical protein CNBB2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259965|gb|EAL22631.1| hypothetical protein CNBB2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223534|gb|AAW41577.1| hypothetical protein CNB03070 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 213
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 106/176 (60%), Gaps = 5/176 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V +T G P TV AA L L Y NK+ L G+I
Sbjct: 38 IYCCRS-GSAADTQAVADVVHQHAQVYTSVYGSPPTVATAAALFEKLCYENKDQLSAGII 96
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK GG +Y +PLGG + +QP+AIGGSGS+Y+YG+ D ++EG +KEE + V
Sbjct: 97 VAGWDKENGGSVYNIPLGGGMFQQPWAIGGSGSTYVYGYCDATYQEGWSKEETVKFVKNT 156
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVAS 178
+SLA+ARDG+SGG +R I + V R F PG+ LP + E E +L MN S
Sbjct: 157 LSLAMARDGSSGGCIRMCVITQDKVERHFIPGNELPRFWEGKE----VLGSMNAGS 208
>gi|387017884|gb|AFJ51060.1| Proteasome subunit Y [Crotalus adamanteus]
Length = 233
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L Q V AANL + + Y + L G+
Sbjct: 73 RIFCCRS-GSAADTQAIADAVAYQLGFHSIELDQQPLVHTAANLFKEMCYRYREDLTAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWD+ +GG++Y VP+GG ++ QPF+IGGSGSSY+YGF D ++K GM+KEE
Sbjct: 132 LVAGWDRRKGGQVYSVPMGGMMVRQPFSIGGSGSSYIYGFVDVSYKPGMSKEECLTFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I +GV RK G+ LP +
Sbjct: 192 ALALAMDRDGSSGGVIRLAAITKDGVERKVILGNELPRF 230
>gi|223647028|gb|ACN10272.1| Proteasome subunit beta type-6 precursor [Salmo salar]
gi|223672893|gb|ACN12628.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 202
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 52 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 111
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 112 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNV 171
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 172 SGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 202
>gi|558528|dbj|BAA06098.1| proteasome subunit Y [Homo sapiens]
Length = 239
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG+ Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQGYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 193 ALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
>gi|15530232|gb|AAH13897.1| Proteasome (prosome, macropain) subunit, beta type 6 [Mus musculus]
Length = 202
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 37 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGS SSY+YG+ D ++EGMTK+E Q
Sbjct: 96 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSRSSYIYGYVDATYREGMTKDECLQFTAN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I GV R+ GD +P +
Sbjct: 156 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIPKF 194
>gi|350425330|ref|XP_003494087.1| PREDICTED: proteasome subunit beta type-6-like [Bombus impatiens]
Length = 232
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q +SD V Y L H ++LG V+ AAN+ R L YN ++ L G+
Sbjct: 72 HIYCCRS-GSAADTQAISDIVAYHLSLHKMELGMEPLVETAANVFRELCYNYRDSLMAGI 130
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWD +GG++Y +PLGG + QP +IGGSGS+Y+YG+ D +K M+++E +LV
Sbjct: 131 LVAGWDSRKGGQVYSIPLGGMCVRQPISIGGSGSTYVYGYMDAQYKPNMSRDECVKLVEN 190
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA++RDG+SGGV+R I +G RK G+ LP ++E
Sbjct: 191 TLALAMSRDGSSGGVIRIGVITEKGAERKVILGNELPRFYE 231
>gi|380027365|ref|XP_003697397.1| PREDICTED: proteasome subunit beta type-6-like [Apis florea]
Length = 232
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 103/151 (68%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SD V Y L H ++LG V+ AAN+ R L YN ++ L G++V GWD +G
Sbjct: 81 AADTQAISDIVAYHLSLHKMELGIEPLVETAANVFRELCYNYRDSLMAGILVAGWDSRKG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG + QP +IGGSGS+Y+YG+ D +K M+K E +LV ++LA++RDG
Sbjct: 141 GQVYSVPIGGMCVRQPISIGGSGSTYVYGYMDSQYKPNMSKNECVKLVENTLALAMSRDG 200
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
+SGGV+R I ++G+ RK G+ LP ++E
Sbjct: 201 SSGGVIRIGVITNKGIERKVILGNELPRFYE 231
>gi|74204932|dbj|BAE20959.1| unnamed protein product [Mus musculus]
Length = 245
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 73 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 132 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY-----PGDTLPLWH 161
A++LA+ RDG+SGGV+R I GV R+ P LP H
Sbjct: 192 ALALAMERDGSSGGVIRLAAIQESGVERQVLLETKSPSSPLPRCH 236
>gi|29841433|gb|AAP06465.1| similar to XM_027825 proteasome (prosome, macropain) subunit, beta
type 6 in Homo sapiens [Schistosoma japonicum]
Length = 218
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 99/150 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QTV+D VRY L H +++ + TV AA + YN ++ L G+IV GWD+ G
Sbjct: 67 AADTQTVADMVRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYRDDLVAGIIVAGWDEQSG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY +PLGG +I QP IGGSGS+Y YG+ D ++GMT+EE V+K V+LAI RDG
Sbjct: 127 GQIYSIPLGGMLIRQPIVIGGSGSTYTYGYVDHDIRKGMTREECINFVLKGVALAINRDG 186
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
+SGG +R I+ +GV R GD +P++
Sbjct: 187 SSGGCIRLAIISKDGVERILTKGDEVPVYR 216
>gi|303283082|ref|XP_003060832.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457183|gb|EEH54482.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 239
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 99/145 (68%), Gaps = 4/145 (2%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQP----ATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD+Q V YV+ + QH ++ A VK+ ANL ++Y NK+ L GMI+GGW
Sbjct: 70 SAADTQNVCAYVKNLVDQHNMERSDADPGMADVKLVANLTMQIAYKNKDKLSAGMIIGGW 129
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
D G ++YG+PLGG+++ PF IGGSG +Y+YG+ D WKEGM++EEAE V +A+SLA
Sbjct: 130 DSKRGPQVYGIPLGGSLLPCPFTIGGSGGAYIYGWCDDTWKEGMSREEAEAWVTRAISLA 189
Query: 127 IARDGASGGVVRTVTINSEGVSRKF 151
I D +SGGV+R VTI+ +G +++
Sbjct: 190 ITMDSSSGGVIRLVTIDDKGCNKQM 214
>gi|209737734|gb|ACI69736.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 212
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 62 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 121
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 122 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNV 181
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 182 SGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 212
>gi|190359943|sp|A7KII6.1|PB6LB_SALSA RecName: Full=Proteasome subunit beta type-6-B like protein;
AltName: Full=Low molecular mass protein 2-delta-B;
Flags: Precursor
gi|148362125|gb|ABQ59652.1| PSMB9b-like protein [Salmo salar]
gi|262189356|gb|ACY30374.1| PSMB9b-like protein [Salmo salar]
Length = 217
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 127 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 187 SGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 217
>gi|59275961|dbj|BAD89548.1| proteasome subunit [Oncorhynchus mykiss]
gi|306494798|gb|ADM95870.1| PSMB9L [Oncorhynchus mykiss]
Length = 217
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 127 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 187 SGGVAHLVVITEEGVEHIVIPGDKLPKFHDE 217
>gi|185133585|ref|NP_001117731.1| low molecular mass protein 2 [Oncorhynchus mykiss]
gi|5823092|gb|AAD53037.1|AF115540_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 127 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 187 SGGVAHLVVITEEGVEHIVIPGDKLPKFHDE 217
>gi|190359942|sp|A7KE01.1|PB6LA_SALSA RecName: Full=Proteasome subunit beta type-6-A like protein;
AltName: Full=Low molecular mass protein 2-delta-A;
Flags: Precursor
gi|146147390|gb|ABQ01993.1| PSMB9a-like [Salmo salar]
gi|148362164|gb|ABQ59686.1| PSMB9a-like protein [Salmo salar]
gi|209737398|gb|ACI69568.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 127 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 187 SGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 217
>gi|51036691|ref|NP_001003660.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Xenopus (Silurana)
tropicalis]
gi|37781212|gb|AAP36732.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
Length = 215
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y + H++++ P V AANL++ +SY K + +IV GWD
Sbjct: 64 SAADAQAVADMAHYHMEVHSVEMEAPPLVLAAANLIKGISYKYKEEIVAHLIVAGWDSKN 123
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG I QPFAIGGSGS+Y+YGF D +K GM++EE E+ V+A+SLA RD
Sbjct: 124 GGQVYGT-LGGMITRQPFAIGGSGSTYIYGFVDSTFKPGMSREECEKFAVQALSLATERD 182
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
G+SGGV+ VT+ EG + + GD +P ++
Sbjct: 183 GSSGGVIYLVTVTKEGTTDRIISGDNIPRFY 213
>gi|159469772|ref|XP_001693037.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
gi|158277839|gb|EDP03606.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
Length = 241
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 110/147 (74%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
A D+Q +SD V+++L Q + + G+ +V++AANLV+L++YNNK+ L M++ GWD++
Sbjct: 65 SAPDTQVISDNVKHYLDQISAESGEEPSVEMAANLVKLINYNNKDHLVGAMLIAGWDRHG 124
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG P+GGT++++ +AI GSGS+Y++G+ D +++ MT+EEAE+ V +A++LA+ RD
Sbjct: 125 GGQVYGAPIGGTLVKEKWAIDGSGSTYIWGYCDNEYRDDMTREEAEKWVAEAIALAMTRD 184
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTL 157
+SGG +R +T++ G K+ GD +
Sbjct: 185 SSSGGSIRLITLDGTGAHHKYIRGDEV 211
>gi|353236563|emb|CCA68555.1| probable PRE3-20S proteasome subunit (beta1) [Piriformospora indica
DSM 11827]
Length = 223
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y+L T Q G+ TV AA + Y NK+ L G+I
Sbjct: 38 IYCCRS-GSAADTQAIADLVHYYLQVLTQQNGEVPTVHNAARIFEKFCYENKDALSAGII 96
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK EG +Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG +EE + V
Sbjct: 97 VAGWDKEEGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYREGWGREETIEFVKNT 156
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
++LA++RDG+SGGV+R I GV R F PGD LP + E E
Sbjct: 157 LALAMSRDGSSGGVIRMAVIQESGVERLFIPGDRLPRFWEGKE 199
>gi|294867461|ref|XP_002765110.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
gi|239865032|gb|EEQ97827.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 99/143 (69%), Gaps = 2/143 (1%)
Query: 18 VSDYVRYFLHQHT--IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIY 75
+S V+YFL+ H + L + VK AANL+RLL+YNNK +L G+IV GWD+ EG ++Y
Sbjct: 42 LSSKVKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQTEGPQVY 101
Query: 76 GVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGG 135
+PLGGTII+Q A GGSGS+Y+ G D ++ M++EEAE V KAV+ A+ARDG+SGG
Sbjct: 102 SIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGG 161
Query: 136 VVRTVTINSEGVSRKFYPGDTLP 158
V+R T+ + V+ K D +P
Sbjct: 162 VIRVTTVTEKDVAEKCLYADKIP 184
>gi|256077218|ref|XP_002574904.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
gi|353229033|emb|CCD75204.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
Length = 225
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 99/151 (65%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D VRY L H +++ + TV AA + YN ++ L G+IV GWD+
Sbjct: 73 SAADTQAVADMVRYQLDFHRLEMNREPTVLEAAVSCKHFCYNYRDDLVAGIIVAGWDEEL 132
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+IY +PLGG +I QP IGGSGS+Y YG+ D +++GMT+EE V+K V+LAI RD
Sbjct: 133 GGQIYSIPLGGMLIRQPIVIGGSGSTYTYGYVDHGFRKGMTREECVSFVLKGVALAINRD 192
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
G+SGG VR I+ +GV R GD +P++
Sbjct: 193 GSSGGCVRLAIISKDGVERILTKGDEVPVYR 223
>gi|224144619|ref|XP_002187722.1| PREDICTED: proteasome subunit beta type-6 [Taeniopygia guttata]
Length = 233
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+++L +P V+ AA L + Y + L G+
Sbjct: 70 RIFCCRS-GSAADTQAVADAVAYQLAFHSVELEEPPRVRTAARLFQQSCYRYREELSAGI 128
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD GG++Y VP+GG ++ QPFA+GGSGSSY+YGF D ++ GM++ + ++ V +
Sbjct: 129 IVAGWDPRRGGQVYVVPMGGLLLRQPFAVGGSGSSYIYGFLDATFQPGMSRSQCQEFVAR 188
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I EGV R G LP
Sbjct: 189 ALALAMVRDGSSGGVIRLAAITEEGVERTVLAGSDLP 225
>gi|45361029|ref|NP_989151.1| proteasome beta 6 subunit [Xenopus (Silurana) tropicalis]
gi|38494336|gb|AAH61603.1| proteasome (prosome, macropain) subunit, beta type, 6 [Xenopus
(Silurana) tropicalis]
gi|89266723|emb|CAJ83898.1| proteasome (prosome macropain) subunit beta type 6 [Xenopus
(Silurana) tropicalis]
Length = 233
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L V AANL + + Y + L G+
Sbjct: 73 RIFCCRS-GSAADTQAIADAVTYQLGFHSIELDGLPLVHTAANLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK +GG++Y VP+GG ++ QPF+IGGSGSSY+YGF D ++ GMTKEE +
Sbjct: 132 IVAGWDKRKGGQVYTVPMGGMMVHQPFSIGGSGSSYIYGFVDSTYRSGMTKEECLKFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A++LA+ RDG+SGGV+R I GV R+ G+ LP +
Sbjct: 192 ALALAMERDGSSGGVIRLAAITEGGVERQVILGNELPRF 230
>gi|357607058|gb|EHJ65339.1| hypothetical protein KGM_11399 [Danaus plexippus]
Length = 208
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++D V Y L+ H ++L +P V+ AA + R L YN ++ L G+
Sbjct: 48 HIYCCRS-GSAADTQAIADIVTYHLNFHKMELSEPPLVQTAAAIFRELCYNYRDSLVAGI 106
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWDK +GG+IY VP+GG + Q +IGGSGS+Y+YG+ D +K M+KEEA++ V
Sbjct: 107 LVAGWDKKKGGQIYSVPIGGMVQRQAVSIGGSGSTYVYGYVDANFKPNMSKEEAKKFVTN 166
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA+ RDG+SGGVVR I GV R GD LP ++E
Sbjct: 167 TLTLAMLRDGSSGGVVRLGVITEAGVERSVILGDELPKFYE 207
>gi|59275970|dbj|BAD89556.1| proteasome subunit [Oncorhynchus mykiss]
Length = 212
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 62 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 121
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M++EE Q A++LA+ RD
Sbjct: 122 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNV 181
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 182 SGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 212
>gi|389747353|gb|EIM88532.1| N-terminal nucleophile aminohydrolase [Stereum hirsutum FP-91666
SS1]
Length = 218
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++DYV YFL + Q G P +V AA + + + Y NK+ L G+
Sbjct: 37 RIYCCRS-GSAADTQAIADYVHYFLQMFSQQHGTP-SVHTAAAMFQKMCYENKDNLSAGI 94
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWD EG +Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG K+E + V
Sbjct: 95 IVGGWDPEEGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWGKDETIKWVKN 154
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
++LA++RDG+SGG +R I +GV R F PG+ LP + E E
Sbjct: 155 TLALAMSRDGSSGGCIRMAVITKDGVERLFVPGNELPTFWEGHE 198
>gi|297290556|ref|XP_001108087.2| PREDICTED: proteasome subunit beta type-9-like isoform 1 [Macaca
mulatta]
gi|146157613|gb|ABQ08185.1| proteasome subunit beta type 9-like protein [Macaca fascicularis]
gi|355561579|gb|EHH18211.1| Proteasome subunit beta type-9 [Macaca mulatta]
gi|355766755|gb|EHH62550.1| Proteasome subunit beta type-9 [Macaca fascicularis]
Length = 219
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR ++Y + L ++V GWD++E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQHE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGVV VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVVYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|18124169|gb|AAL59852.1|AF357920_1 proteasome beta-subunit [Ginglymostoma cirratum]
Length = 217
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L H+I+ G V+ AA++V+ +SY K L +IV GWD+ +
Sbjct: 67 AADAQAIADSVNYQLELHSIETGDAPLVQAAASVVKNISYKYKEELTAHLIVAGWDRKKK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y LGG II QPF++GGSGS Y+YG+ D +KE M+K+E V+ A++LAI RDG
Sbjct: 127 GQVYAT-LGGMIIRQPFSVGGSGSFYIYGYVDATYKEEMSKDECLTFVINAITLAIGRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
ASGGVV TI +G K PG+ LP +H+E
Sbjct: 186 ASGGVVYLTTITEKGTEHKIIPGNELPQFHDE 217
>gi|302564219|ref|NP_001181793.1| proteasome subunit beta type-9 [Macaca mulatta]
Length = 209
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR ++Y + L ++V GWD++E
Sbjct: 58 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQHE 117
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 118 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 176
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGVV VTI + GV + G+ LP +++E
Sbjct: 177 GSSGGVVYLVTITAAGVDHRVILGNELPKFYDE 209
>gi|392568054|gb|EIW61228.1| 20S proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 240
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 103/160 (64%), Gaps = 2/160 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y+L HT G P +V A+ + + L Y+NK+ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVHYYLQLHTQTSGAPPSVHTASTMFQKLCYDNKDGLSAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +PLGG + +QP+AIGGSGS+Y+YG+ D ++EG +++ + V
Sbjct: 117 VAGWDKETGPSVYNIPLGGGLFKQPWAIGGSGSTYVYGYCDATYQEGWDRDQTVEFVKNT 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP-LWH 161
++LA++RDG+SGGV+R I + V R F PGD LP W
Sbjct: 177 LALAMSRDGSSGGVIRMCVITEDKVERLFVPGDQLPKFWQ 216
>gi|321249176|ref|XP_003191365.1| 20S proteasome beta-type subunit; Pre3p [Cryptococcus gattii WM276]
gi|317457832|gb|ADV19578.1| 20S proteasome beta-type subunit, putative; Pre3p [Cryptococcus
gattii WM276]
Length = 213
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V +T G P +V AA L L Y NK+ L G+I
Sbjct: 38 IYCCRS-GSAADTQAIADIVHQHAQVYTSVYGSPPSVATAAALFEKLCYENKDQLSAGII 96
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK GG +Y +PLGG + +QP+AIGGSGS+Y+YG+ D ++EG ++EE + V
Sbjct: 97 VAGWDKENGGSVYNIPLGGGMFQQPWAIGGSGSTYVYGYCDATYQEGWSEEETVKFVKNT 156
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVAS 178
+SLA+ARDG+SGG +R I + V R F PG+ LP + E E ++ MN AS
Sbjct: 157 LSLAMARDGSSGGCIRMCVITQDKVERHFIPGNELPRFWEGKE----VVGSMNAAS 208
>gi|54696310|gb|AAV38527.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [synthetic construct]
gi|61367394|gb|AAX42991.1| proteasome subunit beta type 9 [synthetic construct]
Length = 220
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
G+SGGV+ VTI + GV + G+ LP +++EL
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDEL 220
>gi|18859269|ref|NP_571751.1| proteasome beta 11 subunit [Danio rerio]
gi|5833455|gb|AAD53516.1|AF155576_1 proteasome subunit beta 11 [Danio rerio]
gi|29561857|emb|CAD87790.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|49903219|gb|AAH76475.1| Psmb11 protein [Danio rerio]
gi|94732366|emb|CAK04957.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|182889396|gb|AAI65038.1| Psmb11 protein [Danio rerio]
Length = 217
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+ P VK AA+++R L Y+NK L+ G I GWD+ +G
Sbjct: 67 ADAQAVTKMAKFQLSFHSIQMESPPLVKAAASIMRELCYSNKEELRAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+IY V LGG ++ QPF IGGSGS+Y+YG+ D +K MT EEA Q A++LA+ RD
Sbjct: 127 QIYVVSLGGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGVV V I GV PGD LP +H+E
Sbjct: 187 SGGVVHLVVITEAGVKHIVVPGDELPKFHDE 217
>gi|444519087|gb|ELV12570.1| Proteasome subunit beta type-9 [Tupaia chinensis]
Length = 196
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D Y L H I+L +P V AA +VR ++Y + L ++V GWDK EG
Sbjct: 46 AADAQAVADMAAYQLELHGIELEEPPLVLAAATVVRNITYKYREDLSAHLMVAGWDKREG 105
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RDG
Sbjct: 106 GQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMNRDG 164
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+ VTI + GV + GD LP +++E
Sbjct: 165 SSGGVISLVTITAAGVDHRVISGDELPKFYDE 196
>gi|297661241|ref|XP_002809172.1| PREDICTED: proteasome subunit beta type-9 [Pongo abelii]
Length = 218
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 67 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 127 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 185
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP ++EE
Sbjct: 186 GSSGGVIYLVTITAAGVDHRVILGNELPKFYEE 218
>gi|209733156|gb|ACI67447.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 127 QVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+GGV V I EGV PGD LP +H+E
Sbjct: 187 TGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 217
>gi|402226527|gb|EJU06587.1| 20S proteasome subunit [Dacryopinax sp. DJM-731 SS1]
Length = 233
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 99/154 (64%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y+L + Q G V AA L + L Y NK+ L G+IV GWDK G
Sbjct: 61 AADTQAVADIVHYYLQMYMQQYGSAPPVHAAAELFQKLCYENKDNLSAGIIVAGWDKEVG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG +++ + V +SLA++RDG
Sbjct: 121 PSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWNRDQTVEFVRNTLSLAMSRDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+SGGV+R I EGV R F PG+ LP + E E
Sbjct: 181 SSGGVIRMCVITKEGVERLFVPGNELPRFWEGKE 214
>gi|395324152|gb|EJF56598.1| 20S proteasome subunit, partial [Dichomitus squalens LYAD-421 SS1]
Length = 222
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y+L +T G P V AA + + Y+NK+ L G+IV GWDK G
Sbjct: 66 AADTQAIADLVHYYLQLNTQMSGSPPPVHTAATIFQKFCYDNKDALSAGIIVAGWDKEVG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y +PLGG + +QP+AIGGSGS+Y+YG+ D +++GM ++E + V ++LA++RDG
Sbjct: 126 PSVYNIPLGGGLFKQPWAIGGSGSTYVYGYCDATYRDGMNRDETVEFVKNTLALAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP-LWH 161
+SGGV+R I + V R F PGD LP W
Sbjct: 186 SSGGVIRMCVITEDKVERLFVPGDQLPKFWQ 216
>gi|383412015|gb|AFH29221.1| proteasome subunit beta type-9 proprotein [Macaca mulatta]
Length = 219
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKSGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGVV VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVVYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|442755717|gb|JAA70018.1| Putative 20s proteasome regulatory subunit beta [Ixodes ricinus]
Length = 225
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLS-YNNKNFLQTG 60
I C R +AD+Q ++D V Y L + ++LG+PA V+ AA++ R YN ++ L G
Sbjct: 64 RIYCCRA-GSSADTQAITDIVAYHLGFYEMELGEPAQVETAASVFRXXXXYNYRDQLLAG 122
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I GWD+ +GG++Y +PLGG ++ QP A+GGSGS+Y++G+ D +K+GMTKEE + V
Sbjct: 123 IICAGWDRKKGGQVYVIPLGGMMLRQPVAMGGSGSTYVFGYVDAHFKKGMTKEECLEFVT 182
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+ LA+ RDG+SGGV+R I +GV RK GD +P +++E
Sbjct: 183 NTLGLAMYRDGSSGGVIRLAVITKDGVERKVLTGDEIPKFYQE 225
>gi|332246133|ref|XP_003272204.1| PREDICTED: proteasome subunit beta type-9 [Nomascus leucogenys]
Length = 219
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|332372981|gb|AEE61632.1| unknown [Dendroctonus ponderosae]
Length = 217
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++D V Y L H ++LG+ V+V AN+ + L YN ++ L G+
Sbjct: 57 HIYCCRS-GSAADTQAIADIVSYQLSFHGMELGEEPQVEVGANIFKELCYNYRDSLTAGI 115
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWDK +GG++Y +P+GG + Q +IGGSGSSY+YG+ D +K M++EE V+
Sbjct: 116 LVAGWDKQKGGQVYSIPIGGMCVRQAVSIGGSGSSYVYGYVDANYKLNMSQEECVNFVLN 175
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
++LAIARDG+SGGVVR I +GV R+ G+ LP +++E
Sbjct: 176 TLTLAIARDGSSGGVVRLGIITEKGVERRVQLGNELPKFYQE 217
>gi|147899680|ref|NP_001089683.1| uncharacterized protein LOC734745 [Xenopus laevis]
gi|76780130|gb|AAI06328.1| MGC130855 protein [Xenopus laevis]
Length = 247
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L P V AA+L + + Y + L G+
Sbjct: 73 RIFCCRS-GSAADTQAIADAVTYQLGFHSIELEGPPLVHTAASLFKEMCYRYREDLMAGI 131
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK GG++Y VP+GG ++ Q F+IGGSGSSY+YGF D ++ GM+KEE +
Sbjct: 132 IVAGWDKRRGGQVYTVPMGGMLVHQQFSIGGSGSSYIYGFVDSTYRPGMSKEECLKFTAN 191
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGG++R I EGV R+ G+ LP
Sbjct: 192 ALALAMERDGSSGGIIRLAAITEEGVERQVILGNHLP 228
>gi|213407092|ref|XP_002174317.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
gi|212002364|gb|EEB08024.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
Length = 229
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 103/157 (65%), Gaps = 6/157 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D ++Y+L Q+ +Q G TV+ AA+L + Y NK++L G+I+ G+D+ G
Sbjct: 73 AADTQAVADILKYYLSQYRMQYGVEPTVQTAASLASEMCYQNKDYLTAGLIIAGYDEETG 132
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ QP AIGGSGS+++YGF D +KE M KE A Q + AV LA+ RD
Sbjct: 133 GEVYSIPLGGSVHRQPLAIGGSGSAFIYGFCDANFKENMDKETAIQFLKNAVGLAMERDR 192
Query: 132 ASGGVVRTVTINSEGVSRKFY------PGDTLPLWHE 162
+SGG +R V + G+ RKF+ P T P+ +
Sbjct: 193 SSGGTIRMVILTKSGIERKFFALNTANPLPTFPIQQK 229
>gi|449016420|dbj|BAM79822.1| 20S core proteasome subunit beta 1 [Cyanidioschyzon merolae strain
10D]
Length = 280
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D VR ++ ++ +PATV+ AA L R L Y NK+ L G+I GWD G
Sbjct: 129 AADTQMLADTVRRYVTALALETQRPATVRTAAALFRELIYQNKSRLTAGVICAGWDPLNG 188
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y + LGGT++ QPF+IGGSGS+Y+YG+ D ++++GM +E +A SLA+ARDG
Sbjct: 189 GQVYSITLGGTLVRQPFSIGGSGSTYIYGYCDASYRKGMNREACIAFCQQAASLAMARDG 248
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV+R V I G R + D LP
Sbjct: 249 SSGGVLRMVCIEESGAQRLLFTEDQLP 275
>gi|328774191|gb|EGF84228.1| hypothetical protein BATDEDRAFT_15564 [Batrachochytrium
dendrobatidis JAM81]
Length = 214
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 99/151 (65%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L ++ G V+ AAN+ + + Y NK+ L G+IV GWD G
Sbjct: 63 AADTQAVADMVHYQLQVFSVTEGVLPKVETAANMFQRIVYENKDRLMAGIIVAGWDPVNG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y +PLGG++ ++PF IGGSGSSY+YG+ D +K+ MT+EEA Q AVSLA++RDG
Sbjct: 123 PSVYSIPLGGSLHKRPFTIGGSGSSYIYGYCDATFKDDMTREEAIQFTKNAVSLAMSRDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
+SGG +R I + V R F PG+ LP + E
Sbjct: 183 SSGGTIRLAIITKDNVERIFVPGNALPTFWE 213
>gi|403268777|ref|XP_003926443.1| PREDICTED: proteasome subunit beta type-9 [Saimiri boliviensis
boliviensis]
Length = 219
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLLVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D +K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDSVYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVISGNKLPKFYDE 219
>gi|409079833|gb|EKM80194.1| hypothetical protein AGABI1DRAFT_57725 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198405|gb|EKV48331.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 240
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V Y L +T G P V AA L + + Y NK+ L G+I
Sbjct: 58 IYCCRS-GSAADTQAVADAVHYQLQMYTQMSGGPPPVHTAAALFQRICYENKDGLSAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D +KEG ++E V
Sbjct: 117 VAGWDKEAGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYKEGWGRDETVDFVKNT 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
++LA++RDG+SGGV+R I EGV R F PG+ LP + E E
Sbjct: 177 LALAMSRDGSSGGVIRMCVITEEGVERLFVPGNELPKFWEGAE 219
>gi|390601185|gb|EIN10579.1| proteasome-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 240
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y+L +T +G P +V AA L + L Y NK+ L G+
Sbjct: 58 RIYCCRS-GSAADTQAVADIVHYYLQMYTQSMG-PPSVHTAAALFQRLCYENKDALSAGI 115
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ G +Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG K++ V
Sbjct: 116 IVAGWDEEVGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATFQEGWGKDQTVDFVKN 175
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+SLA+ARDG+SGGV+R I +G R F PGD LP + E E
Sbjct: 176 TLSLAMARDGSSGGVIRMCVITKDGAERLFVPGDQLPKFWEGRE 219
>gi|405118543|gb|AFR93317.1| proteasome subunit beta type 6 [Cryptococcus neoformans var. grubii
H99]
Length = 213
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 103/168 (61%), Gaps = 1/168 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V +T G P +V AA L L Y NK+ L G+I
Sbjct: 38 IYCCRS-GSAADTQAIADVVHQHAQVYTSVYGSPPSVATAAGLFEKLCYENKDQLSAGII 96
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK GG +Y +PLGG + +QP+AIGGSGS+Y+YG+ D ++EG ++EE + V
Sbjct: 97 VAGWDKENGGSVYNIPLGGGMFQQPWAIGGSGSTYVYGYCDATYQEGWSEEETVKFVKNT 156
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSL 170
+SLA+ARDG+SGG +R I + V R F PG+ LP + E E S+
Sbjct: 157 LSLAMARDGSSGGCIRMCVITQDKVERHFIPGNELPRFWEGKEVVGSM 204
>gi|402866604|ref|XP_003897469.1| PREDICTED: proteasome subunit beta type-9 [Papio anubis]
gi|380789111|gb|AFE66431.1| proteasome subunit beta type-9 proprotein [Macaca mulatta]
Length = 219
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGVV VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVVYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|328850577|gb|EGF99740.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 220
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD-KY 69
AAD+Q V+DYV + +T++ G +V L + + Y+NK+ L G+IV GWD +
Sbjct: 66 SAADTQAVADYVHLYCQMYTMEHGHAPSVHTVGTLFQQICYSNKDNLSAGIIVAGWDSQL 125
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+ G +Y +PLGG I +QP+AIGGSGS+Y+YG+ D ++EG +KEE + V A++LA++R
Sbjct: 126 KNGSVYNIPLGGGIFQQPWAIGGSGSTYIYGYCDSNYREGWSKEETVEFVRNALALAMSR 185
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
DG+SGG +R I + V R F PGD LP + E+
Sbjct: 186 DGSSGGTIRMAIITEDNVERMFVPGDKLPTFWEK 219
>gi|5823090|gb|AAD53036.1|AF115539_1 proteasome delta [Oncorhynchus mykiss]
Length = 223
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L + V+ AANL + Y + L G+
Sbjct: 63 RIFCCRS-GSAADTQAIADVVTYQLGFHSIELDEAPLVQTAANLFKASCYRYREELMAGI 121
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK GG++Y VP+GG ++ QP ++GGSGS+Y+YG+ D +K MTK++ +LV
Sbjct: 122 IVAGWDKRRGGQVYTVPVGGMLVRQPVSVGGSGSTYIYGYMDSNYKPNMTKDQCLRLVSG 181
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLW 160
A+SLA+ RDG+SGGVVR I+ GV R+ G+ LP W
Sbjct: 182 ALSLAMERDGSSGGVVRLAAISETGVDRQVILGNQLPKW 220
>gi|10803373|emb|CAC13120.1| low molecular mass polypeptide subunit PSMB9 [Takifugu rubripes]
Length = 216
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++G+ V+ AANLV+ +SY K L +IV GWDK +G
Sbjct: 66 AADAQTIAEIVNYQLDVHSVEIGEDPLVRSAANLVKNISYKYKEELMAHLIVAGWDKRKG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ L G + QPFA+GGSGSSY+YGF D +++GM+KEEA+Q VV +SLA+ RDG
Sbjct: 126 GQVFAT-LNGLLTRQPFAVGGSGSSYVYGFVDAEYRKGMSKEEAQQFVVNTLSLAMNRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 185 SSGGVAYIVTIDEHNAEEKVILGNDLPTFFDQ 216
>gi|410926025|ref|XP_003976479.1| PREDICTED: proteasome subunit beta type-9-like, partial [Takifugu
rubripes]
Length = 181
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++G+ V+ AANLV+ +SY K L +IV GWDK +G
Sbjct: 31 AADAQTIAEIVNYQLDVHSVEIGEDPLVRSAANLVKNISYKYKEELMAHLIVAGWDKRKG 90
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ L G + QPFA+GGSGSSY+YGF D +++GM+KEEA+Q VV +SLA+ RDG
Sbjct: 91 GQVFAT-LNGLLTRQPFAVGGSGSSYVYGFVDAEYRKGMSKEEAQQFVVNTLSLAMNRDG 149
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 150 SSGGVAYIVTIDEHNAEEKVILGNDLPTFFDQ 181
>gi|37781216|gb|AAP36733.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
gi|165970624|gb|AAI58548.1| Unknown (protein for MGC:186705) [Xenopus (Silurana) tropicalis]
Length = 215
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y + H+I++ V AANL++ +SY K + +IV GWD
Sbjct: 64 SAADAQAVADMAHYHMEVHSIEMEASPLVLAAANLIKGISYKYKEEIAAHLIVAGWDSKN 123
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG I QPFAIGGSGS+Y+YGF D +K GM++EE E V+A+SLA+ RD
Sbjct: 124 GGQVYGT-LGGMITRQPFAIGGSGSTYIYGFVDSTFKPGMSREECETFAVQALSLAMERD 182
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
G+SGGV+ VT+ EG + GD +P ++
Sbjct: 183 GSSGGVIYLVTVTKEGTKNRIISGDNIPRFY 213
>gi|403418153|emb|CCM04853.1| predicted protein [Fibroporia radiculosa]
Length = 240
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L + G+ +V AA++ L Y NK+ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVHYHLQSYRQTQGESPSVHAAASIFEKLCYENKDALSAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
VGGWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG ++E V
Sbjct: 117 VGGWDKETGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQEGWGRDETVNFVKNT 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
++LA++RDG+SGGV+R I +GV R F PG+ LP + E E + P PM
Sbjct: 177 LALAMSRDGSSGGVIRMCVITEDGVERLFVPGNELPKFWEGKELLGMPAKTKELTGPVPM 236
>gi|392593099|gb|EIW82425.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 237
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y+L +T Q V AA++ + + Y NK+ L G+
Sbjct: 52 RIYCCRS-GSAADTQAVADMVHYYLQLYTQQYNSLPPVHSAASVFQKICYENKDALSAGI 110
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D +K+G ++E + V
Sbjct: 111 IVAGWDKEAGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYKDGWGRDETVEFVKN 170
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+SLA++RDG+SGGV+R I +GV R F PGD LP + E E
Sbjct: 171 TLSLAMSRDGSSGGVIRMCVITEDGVERLFVPGDQLPKFWEGRE 214
>gi|426352667|ref|XP_004043831.1| PREDICTED: proteasome subunit beta type-9 [Gorilla gorilla gorilla]
Length = 218
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 67 SAADAQAVADMATYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 127 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 185
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 186 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 218
>gi|406605482|emb|CCH43126.1| putative proteasome subunit beta type-6 [Wickerhamomyces ciferrii]
Length = 236
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 107/150 (71%), Gaps = 2/150 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +T Q G+P + K+AA+L++ L+Y NK+ L G+IV G+D+
Sbjct: 85 AADTQAVADIVKYHLELYTAQHGKPPSAKIAASLLQELTYTNKDALTAGLIVAGYDERSN 144
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG+I +QPFAI GSGSSY+YG+ D+ +KE TKEEA V A++ AI DG
Sbjct: 145 GEVYSIPLGGSIHKQPFAIAGSGSSYIYGWTDENYKEDFTKEEAVDFVKTALTQAIQWDG 204
Query: 132 ASGGVVRTVTINSEGVSR-KFYPGD-TLPL 159
+SGGV+R V + +G+ R F+P + T P+
Sbjct: 205 SSGGVIRQVILTKDGIERLVFFPDEFTKPI 234
>gi|388580573|gb|EIM20887.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 245
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V Y L +Q G+ +V AA L L Y+NK+ L G+I
Sbjct: 64 IYCCRS-GSAADTQAVADVVTYHLSMFGVQQGERPSVHTAAALFNQLCYSNKDRLSAGII 122
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+DK GG +Y +PLGG + QP+AIGGSGS+Y+YG+ D +K+ MTK+E V
Sbjct: 123 VAGYDKENGGSVYNIPLGGGMFRQPWAIGGSGSTYVYGYCDATYKDNMTKDETVTFVKNT 182
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
++LA++RDG+SGG +R I + V R F PG+ LP + E E N
Sbjct: 183 LALAMSRDGSSGGTIRMCVITEDNVERLFVPGNELPRFWEGQEIIN 228
>gi|114606765|ref|XP_001167429.1| PREDICTED: proteasome subunit beta type-9 isoform 3 [Pan
troglodytes]
gi|397474371|ref|XP_003808655.1| PREDICTED: proteasome subunit beta type-9 [Pan paniscus]
gi|410328377|gb|JAA33135.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Pan troglodytes]
Length = 218
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 67 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 127 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 185
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 186 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 218
>gi|194223397|ref|XP_001493056.2| PREDICTED: proteasome subunit beta type-9-like [Equus caballus]
Length = 219
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K+GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKQGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|119624058|gb|EAX03653.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2), isoform CRA_a [Homo
sapiens]
Length = 196
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 45 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 104
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 105 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 163
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 164 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 196
>gi|392959|gb|AAC50154.1| LMP-2 [Homo sapiens]
gi|896224|gb|AAC60646.1| proteasome LMP2.s [Homo sapiens]
Length = 209
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 58 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 117
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 118 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 176
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 177 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 209
>gi|61367386|gb|AAX42990.1| proteasome subunit beta type 9 [synthetic construct]
Length = 220
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+ V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAHAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
G+SGGV+ VTI + GV + G+ LP +++EL
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDEL 220
>gi|185133551|ref|NP_001117730.1| proteasome subunit beta type-9 precursor [Oncorhynchus mykiss]
gi|4741816|gb|AAD28715.1|AF112117_1 low molecular mass polypeptide complex subunit 2 [Oncorhynchus
mykiss]
Length = 217
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADSQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|225716640|gb|ACO14166.1| Proteasome subunit beta type-6 precursor [Esox lucius]
Length = 262
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L H+I+L + V+ AANL + Y + L G+IV GWDK G
Sbjct: 80 AADTQAIADIVAYQLGFHSIELDEAPLVQAAANLFKASCYRYREELMAGIIVAGWDKRRG 139
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG ++ QP ++GGSGS+Y+YGF D +K MTKE+ LV A+SLA+ RDG
Sbjct: 140 GQVYTVPVGGMLVRQPVSVGGSGSTYIYGFMDSNYKPNMTKEQCLHLVSGALSLAMERDG 199
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV+R I+ GV R+ G+ LP
Sbjct: 200 SSGGVIRLAAISESGVERQVILGNQLP 226
>gi|4506205|ref|NP_002791.1| proteasome subunit beta type-9 proprotein [Homo sapiens]
gi|417529|sp|P28065.2|PSB9_HUMAN RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|34635|emb|CAA47024.1| LMP2 [Homo sapiens]
gi|34656|emb|CAA78700.1| MHC-encoded proteasome subunit gene [Homo sapiens]
gi|1054744|emb|CAA60784.1| LMP2 [Homo sapiens]
gi|41388830|gb|AAH65513.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|49456273|emb|CAG46457.1| PSMB9 [Homo sapiens]
gi|119624059|gb|EAX03654.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2), isoform CRA_b [Homo
sapiens]
gi|261860734|dbj|BAI46889.1| proteasome (prosome, macropain) subunit, beta type, 9 [synthetic
construct]
Length = 219
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|36059|emb|CAA44603.1| RING12 [Homo sapiens]
gi|228223|prf||1718344A RING12 gene
Length = 219
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H I+L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|432094630|gb|ELK26136.1| Proteasome subunit beta type-9 [Myotis davidii]
Length = 196
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D Y L H ++L +P V AAN+VR +SY + L ++V GWD+ EG
Sbjct: 46 AADAQAVADMAAYQLELHGMELEEPPLVLAAANVVRNISYKYREELSAHLMVAGWDQREG 105
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + +A++LA+ RDG
Sbjct: 106 GQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKSGMSPEECRRFTTEAITLAMNRDG 164
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 165 SSGGVIYLVTITAAGVDHRVILGNELPKFYDE 196
>gi|302696941|ref|XP_003038149.1| hypothetical protein SCHCODRAFT_49831 [Schizophyllum commune H4-8]
gi|300111846|gb|EFJ03247.1| hypothetical protein SCHCODRAFT_49831 [Schizophyllum commune H4-8]
Length = 222
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H Q G+ +V +AA++ + L Y NK+ L G+
Sbjct: 37 RIYCCRS-GSAADTQAVADIVHYQLQMHAQQAGERPSVHIAASIFQKLCYENKDALSAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG ++E V
Sbjct: 96 IVAGWDKEIGPSVYNIPLGGGMFRQPWAIGGSGSTYVYGYCDATYQEGWGRDETVNFVKN 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE------PQNSLL 171
++LA++RDG+SGGV+R I GV R F PG+ LP + E E P N ++
Sbjct: 156 TLALAMSRDGSSGGVIRMCVITEGGVERLFVPGNELPRFWEGKEVLGADAPSNKVI 211
>gi|83816981|ref|NP_001033050.1| proteasome subunit beta type-9 [Sus scrofa]
gi|311260176|ref|XP_003128374.1| PREDICTED: proteasome subunit beta type-9-like [Sus scrofa]
gi|83320492|gb|ABC02872.1| proteasome beta 9 subunit [Sus scrofa]
gi|84514209|gb|ABC59113.1| proteasome beta 9 subunit [Sus scrofa]
gi|110276961|gb|ABG57117.1| proteasome beta 9 subunit [Sus scrofa]
gi|147225182|emb|CAN13314.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Sus scrofa]
Length = 219
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|389609335|dbj|BAM18279.1| proteasome beta1 subunit [Papilio xuthus]
Length = 220
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++D V Y L+ H ++LG+P V+ AA + R L YN ++ L G+
Sbjct: 65 HIYCCRS-GSAADTQAIADIVTYHLNFHKMELGEPPLVQTAAAIFRELCYNYRDSLVAGI 123
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWDK EGG+IY VP+GG + Q +IGGSGSSY+YG+ D +K M+K+EA + V
Sbjct: 124 LVAGWDKKEGGQIYCVPIGGMVQRQAVSIGGSGSSYVYGYVDANFKPKMSKDEAVKFVTN 183
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTL 157
++LA+ RDG+SGGVVR I GV R GDT+
Sbjct: 184 TLTLAMLRDGSSGGVVRLGVITEAGVERSVILGDTV 219
>gi|196007810|ref|XP_002113771.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190584175|gb|EDV24245.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 229
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 104/152 (68%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H ++L + V+ A+++ R + Y ++ + G+I GWD ++
Sbjct: 77 SAADTQAIADIVAYSLNFHKMELDEEPLVETASSIFRDMCYRYRDSMVAGIICAGWDCFK 136
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + +PF IGGSGS+Y+YG+ D +K M+K E V +AV+LA++RD
Sbjct: 137 GGQVYVIPLGGMCVRRPFTIGGSGSTYIYGYCDAHYKPNMSKNECLDFVKQAVALAMSRD 196
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+R +I+ +G++R GD LP +++
Sbjct: 197 GSSGGVIRLASIDKDGINRTIISGDKLPTFYD 228
>gi|225716290|gb|ACO13991.1| Proteasome subunit beta type-9 precursor [Esox lucius]
Length = 216
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWD+ G
Sbjct: 66 AADAQTIAEMVNYQLDVHSIEIGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRGG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ V L G + QPFA+GGSGSSY+YGF D +++GM+KE+ +Q VV +SLA++RDG
Sbjct: 126 GQVF-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYQKGMSKEDCQQFVVNTISLAMSRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 185 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 216
>gi|91087659|ref|XP_973571.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
gi|270009417|gb|EFA05865.1| hypothetical protein TcasGA2_TC008665 [Tribolium castaneum]
Length = 224
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++D V Y L H ++LG+ V+ A + R L YN ++ L G+
Sbjct: 64 HIYCCRS-GSAADTQAIADIVAYHLSFHGMELGEEPLVETGAAVFRELCYNYRDSLMAGI 122
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWDK +GG++Y +P+GG + Q +IGGSGSSY+YG+ D +K M+KEE + +
Sbjct: 123 LVAGWDKRKGGQVYSIPIGGMCVRQQVSIGGSGSSYVYGYVDANYKPNMSKEECVKFITN 182
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA++RDG+SGGVVR I EG+ R+ GD LP + E
Sbjct: 183 TLALAMSRDGSSGGVVRLGIITEEGIERRVVLGDQLPKFFE 223
>gi|449549681|gb|EMD40646.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 241
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L +T G+ +V AAN+ + L Y+NK+ L G+I
Sbjct: 60 IYCCRS-GSAADTQAIADAVHYHLQMYTQMHGEAPSVHAAANVFQTLCYSNKDRLSAGII 118
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D +++G ++E V
Sbjct: 119 VAGWDKEVGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQDGWGRDETINFVKNT 178
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA++RDG+SGGV+R I +GV R F PG+ LP + E
Sbjct: 179 LALAMSRDGSSGGVIRMCVITEDGVERLFVPGNELPKFWE 218
>gi|225705198|gb|ACO08445.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|59275971|dbj|BAD89557.1| proteasome subunit [Oncorhynchus mykiss]
Length = 217
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|59275960|dbj|BAD89547.1| proteasome subunit [Oncorhynchus mykiss]
gi|225704848|gb|ACO08270.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|306494799|gb|ADM95871.1| PSMB9 [Oncorhynchus mykiss]
Length = 217
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|21263928|sp|Q9PT26.1|PSB9_ONCMY RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|5823094|gb|AAD53038.1|AF115541_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|431916888|gb|ELK16648.1| Proteasome subunit beta type-9 [Pteropus alecto]
Length = 249
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H ++L +P V AAN+VR +SY + L ++V GWD+ E
Sbjct: 98 SAADAQAVADMAAYQLELHGMELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 157
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RD
Sbjct: 158 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMNRD 216
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 217 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 249
>gi|263173494|gb|ACY69954.1| proteasome subunit beta type-6 [Cimex lectularius]
Length = 229
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L + + G+ V AA L R L YN +N L G+IV GWD+ +G
Sbjct: 76 AADTQAVADIVSYHLAFYKSETGEEPLVSTAAALFRELCYNYRNKLTAGIIVAGWDRVKG 135
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VPLGG +EQ +A+GGSGS+Y+YGF D ++EGM +E + + +A++LAI RDG
Sbjct: 136 GQVYMVPLGGMCVEQKYAMGGSGSTYIYGFTDANYREGMNSKECKAFIKQAIALAIRRDG 195
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGV+R I +G+ R+ G +P
Sbjct: 196 SSGGVIRMGVITKDGIQREVVAGKDIP 222
>gi|430814368|emb|CCJ28367.1| unnamed protein product [Pneumocystis jirovecii]
Length = 212
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 104/150 (69%), Gaps = 5/150 (3%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 73
++Q ++D +RY+L +TIQ Q +V++AANL + Y NKNFL G+I+ G+D+ +GG+
Sbjct: 61 NTQAIADVLRYYLSLYTIQNNQVPSVQIAANLASEICYQNKNFLSAGLIIAGYDQKKGGE 120
Query: 74 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV---VKAVSLAIARD 130
+Y +PLGG+I +Q AIGGSGSSY+YGF D+ + M+KEE + + + VSLAI RD
Sbjct: 121 VYSIPLGGSIHQQNIAIGGSGSSYIYGFCDKNFTPNMSKEEGIKFLKEGIHTVSLAIKRD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYP--GDTLP 158
G+SGGV+R V I + + R F+ +T+P
Sbjct: 181 GSSGGVIRMVVITKDNIERLFFSQEDNTIP 210
>gi|308321308|gb|ADO27806.1| proteasome subunit beta type-9-a like protein [Ictalurus furcatus]
Length = 214
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 96/151 (63%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+G P VK AA +++ L Y+N+ LQ G I GWDK +G
Sbjct: 64 ADAQHVTRVAKFQLSFHSIQMGSPPLVKAAATVLKELCYSNREDLQAGFITAGWDKKKGP 123
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V +GG +I QPF IGGSGS+Y+YG+ D +K M++EE Q V A++LAI RD
Sbjct: 124 QMYTVSMGGMLISQPFTIGGSGSTYIYGYMDAKYKPDMSREECIQFVKNALALAIGRDNV 183
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGG+ V I GV PGD LP + +E
Sbjct: 184 SGGIAHLVVITEGGVEHVVVPGDKLPKFSDE 214
>gi|318037293|ref|NP_001187911.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
gi|308324307|gb|ADO29288.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
Length = 214
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 96/151 (63%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+G P VK AA +++ L Y+N+ L+ G I GWDK +G
Sbjct: 64 ADAQHVTRVAKFQLSFHSIQMGSPPLVKAAATVLKELCYSNREDLEAGFITAGWDKKKGP 123
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V +GG +I QPF IGGSGS+Y+YG+ D +K M++EE Q V A++LAI RD
Sbjct: 124 QVYTVSMGGMLISQPFTIGGSGSTYMYGYMDAKYKPDMSREECVQFVKNALALAIGRDNV 183
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGG+ V I GV PGD LP + +E
Sbjct: 184 SGGIAHLVVITEGGVEHVVVPGDKLPKFSDE 214
>gi|185133857|ref|NP_001117174.1| proteasome subunit beta type-9 precursor [Salmo salar]
gi|185136351|ref|NP_001117186.1| proteasome subunit beta type-9 precursor [Salmo salar]
gi|21263915|sp|Q9DD33.1|PSB9_SALSA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|12003001|gb|AAG43434.1|AF184932_1 low molecular mass protein 2 [Salmo salar]
gi|12003003|gb|AAG43435.1|AF184933_1 low molecular mass protein 2 [Salmo salar]
gi|12003005|gb|AAG43436.1|AF184934_1 low molecular mass protein 2 [Salmo salar]
gi|12003007|gb|AAG43437.1|AF184935_1 low molecular mass protein 2 [Salmo salar]
gi|12003009|gb|AAG43438.1|AF184936_1 low molecular mass protein 2 [Salmo salar]
gi|146147388|gb|ABQ01991.1| proteosome subunit beta type 9 [Salmo salar]
gi|148362122|gb|ABQ59649.1| PSMB9 [Salmo salar]
gi|148362160|gb|ABQ59682.1| PSMB9 [Salmo salar]
gi|209733640|gb|ACI67689.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|209734580|gb|ACI68159.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|262189357|gb|ACY30375.1| PSMB9 [Salmo salar]
Length = 217
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGS+Y+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|348541139|ref|XP_003458044.1| PREDICTED: proteasome subunit beta type-9-like [Oreochromis
niloticus]
Length = 216
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LVR +SY K L +IV GWD+ +G
Sbjct: 66 AADAQTIAEIVNYQLDVHSIEIGEDPQVRSAATLVRNISYKYKEELSAHLIVAGWDRRDG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ + G + QPFA+GGSGSSY+YGF D ++ GM KEE +Q VV +SLA+ RDG
Sbjct: 126 GQVFAT-MKGLLTRQPFAVGGSGSSYVYGFVDAEYRRGMRKEECQQFVVNTLSLAMNRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ G K G+ LP + ++
Sbjct: 185 SSGGVAYIVTIDEHGTEEKVVLGNQLPTFFDQ 216
>gi|367032140|ref|XP_003665353.1| hypothetical protein MYCTH_2308969 [Myceliophthora thermophila ATCC
42464]
gi|347012624|gb|AEO60108.1| hypothetical protein MYCTH_2308969 [Myceliophthora thermophila ATCC
42464]
Length = 229
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 98/145 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T + AA + + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVKYQLELFAMTSGKPPTTQTAAAIFQEICYANKDRLTAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +QP+AIGGSGS+Y+YGF D W+EGM + EA V +A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQPYAIGGSGSTYIYGFCDANWREGMEEAEAVSFVKEALKEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + ++G R Y DT
Sbjct: 198 SSGGVIRMVVLTAKGADRHLYLPDT 222
>gi|255078980|ref|XP_002503070.1| predicted protein [Micromonas sp. RCC299]
gi|226518336|gb|ACO64328.1| predicted protein [Micromonas sp. RCC299]
Length = 237
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 107/158 (67%), Gaps = 4/158 (2%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLG--QP--ATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD+Q V +V+ + +H I G +P A VK+ AN+ ++Y NK+ L GMI+ GW
Sbjct: 70 SAADTQNVCAFVKNAVEEHGIMSGSDEPGMADVKLVANVTMQIAYRNKDRLSAGMIIAGW 129
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
D+ G +++G+PLGG++ + F +GGSGS+Y+ GF D WK GM++EEAE + +A+S+A
Sbjct: 130 DRRAGPQVFGIPLGGSLEKCDFTLGGSGSAYITGFCDDTWKPGMSREEAEAWIRRAISIA 189
Query: 127 IARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEEL 164
I+RD +SGGV+R VTI+ +G ++ + PL ++EL
Sbjct: 190 ISRDASSGGVIRLVTIHEKGAEKQMFEPAQHPLAYDEL 227
>gi|334323597|ref|XP_001377269.2| PREDICTED: proteasome subunit beta type-9-like [Monodelphis
domestica]
Length = 224
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D Y L H ++L +P V AAN+VR +SY + L ++V GWD+Y G
Sbjct: 74 AADAQAIADMATYQLELHGMELEEPPLVLSAANVVRNISYKYREELSAHLMVAGWDRYLG 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG L G + QPFAIGGSGS+Y+YG+ D A+K GM+ EE Q + A++LA+ RDG
Sbjct: 134 GQVYGT-LEGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRQFTIDAITLAMGRDG 192
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+ VTI + G ++ G LP +++E
Sbjct: 193 SSGGVIYLVTITAAGTKQEVITGKELPQFYDE 224
>gi|440909600|gb|ELR59489.1| Proteasome subunit beta type-9 [Bos grunniens mutus]
Length = 219
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG + G +I QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGVV TI GV + GD LP +++E
Sbjct: 187 GSSGGVVYLATITGAGVDHRVILGDELPRFYDE 219
>gi|62204261|gb|AAH92699.1| Psmb6 protein [Danio rerio]
Length = 232
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 99/147 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L H+I+L + V+ AA+L R + Y + L G+IV GWD+ G
Sbjct: 81 AADTQAIADAVTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVAGWDRRRG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG + QP ++GGSGSSY+YG+ D ++ GM+KEE + A++LA+ RDG
Sbjct: 141 GQVYTVPVGGMLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDG 200
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGVVR I+ +GV R+ G+ LP
Sbjct: 201 SSGGVVRLAVISEQGVERQAILGNQLP 227
>gi|225709296|gb|ACO10494.1| Proteasome subunit beta type-9 precursor [Caligus rogercresseyi]
Length = 217
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGS+Y+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSAYVYGFVDVEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|225704686|gb|ACO08189.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++R+G
Sbjct: 127 GQVY-VTLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRNG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|198417706|ref|XP_002126641.1| PREDICTED: similar to proteasome subunit Y [Ciona intestinalis]
Length = 217
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 98/152 (64%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V + I +G +VK AA + R Y+ ++ L G+IV GWD +
Sbjct: 65 SAADTQAIADAVAANVELDGIVMGGLPSVKKAAEIFRQYCYDYRDNLTAGIIVAGWDPKQ 124
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG +I Q F+IGGSGS+Y+YG D +KE MTK+E Q A+SLAI RD
Sbjct: 125 GGQVYTIPLGGMLIRQQFSIGGSGSTYIYGHVDATFKENMTKDECIQFCTNALSLAINRD 184
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGVVR I EGV RK G+ LP ++E
Sbjct: 185 GSSGGVVRLAVITKEGVERKVILGNDLPRFYE 216
>gi|341057648|gb|EGS24079.1| hypothetical protein CTHT_0000100 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 229
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L ++ G+P T + AA + + + Y NK+ L G+I+ GWD G
Sbjct: 78 AADTQAVADVVKYQLELFSMMNGRPPTTQTAAAIFQEICYANKDMLSAGLIIAGWDPRHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ Q +AIGGSGS+Y+YG+ D W+EGM++EEA Q V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHRQAYAIGGSGSTYIYGYCDAHWREGMSEEEAVQFVKGALREAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y DT
Sbjct: 198 SSGGVIRMVVLTEKGAERHLYLPDT 222
>gi|224473831|gb|ACN49170.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 216
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++G+ V+ AA LV+ +SY K L +IV GWD+ +G
Sbjct: 66 AADAQTIAEMVNYQLDVHSLEIGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ LGG + QPFAIGGSGSSY+YGF D ++ GMTKEE ++ VV ++LA+ RDG
Sbjct: 126 GQVFAT-LGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 185 SSGGVAYIVTIDEHSTDEKVILGNDLPTFFDQ 216
>gi|182891064|gb|AAI65062.1| Psmb6 protein [Danio rerio]
Length = 223
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 99/147 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L H+I+L + V+ AA+L R + Y + L G+IV GWD+ G
Sbjct: 72 AADTQAIADAVTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVAGWDRRRG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG + QP ++GGSGSSY+YG+ D ++ GM+KEE + A++LA+ RDG
Sbjct: 132 GQVYTVPVGGMLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGVVR I+ +GV R+ G+ LP
Sbjct: 192 SSGGVVRLAVISEQGVERQAILGNQLP 218
>gi|77735723|ref|NP_001029560.1| proteasome subunit beta type-9 precursor [Bos taurus]
gi|108860909|sp|Q3SZC2.1|PSB9_BOVIN RecName: Full=Proteasome subunit beta type-9; AltName:
Full=Proteasome subunit beta-1i; Flags: Precursor
gi|63169163|gb|AAY34699.1| proteosome subunit beta type 9 [Bos taurus]
gi|74267808|gb|AAI02964.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Bos taurus]
gi|296474568|tpg|DAA16683.1| TPA: proteasome subunit beta type-9 precursor [Bos taurus]
Length = 219
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG + G +I QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ TI GV + GD LP +++E
Sbjct: 187 GSSGGVIYLATITGAGVDHRVILGDELPRFYDE 219
>gi|295901495|dbj|BAJ07259.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|295901526|dbj|BAJ07280.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 94/151 (62%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+ P V AA++++ L YNNK LQ G I GWDK +G
Sbjct: 67 ADAQAVTKTAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDKKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I QP IGGSGS+Y+YG+ D +K MT+EE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP + +E
Sbjct: 187 SGGVANLVVITEEGVEHIVIPGDKLPRFSDE 217
>gi|319996713|ref|NP_001188447.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|18157531|dbj|BAB83846.1| PSMB9-like [Oryzias latipes]
gi|295901528|dbj|BAJ07281.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 94/151 (62%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+ P V AA++++ L YNNK LQ G I GWDK +G
Sbjct: 67 ADAQAVTKTAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDKKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I QP IGGSGS+Y+YG+ D +K MT+EE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP + +E
Sbjct: 187 SGGVANLVVITKEGVEHIVIPGDKLPRFSDE 217
>gi|18859277|ref|NP_571753.1| proteasome beta 9b subunit [Danio rerio]
gi|5833463|gb|AAD53520.1|AF155580_1 proteasome subunit beta 9B [Danio rerio]
Length = 227
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++ + V AA LV+ +SY K L +IV GWD+ EG
Sbjct: 66 AADAQTIAEIVNYQLDVHSIEVDEDPLVCSAATLVKNISYKYKEELSAHLIVAGWDRREG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y L G + QPFA+GGSGS Y+YGF D ++ GMTK+E ++ V+ ++SLA+ RDG
Sbjct: 126 GQVYAT-LSGLLTRQPFAVGGSGSFYIYGFVDAEYRAGMTKKECQEFVINSLSLAMGRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWH--EELEPQNSL 170
+SGGV VTI+SE V K G+ LP ++ + +EP ++
Sbjct: 185 SSGGVAYLVTIDSESVEEKCILGNQLPTFYDPDTVEPSKAV 225
>gi|242002132|ref|XP_002435709.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215499045|gb|EEC08539.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 226
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 4/154 (2%)
Query: 14 DSQTVSDYVRYFL----HQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
D+ + D + YF H ++LG+P V+ AA++ R L YN ++ L G+I GWD+
Sbjct: 73 DNALLFDILNYFAECNRHLSRMELGEPPQVETAASVFRELCYNYRDQLLAGIICAGWDRK 132
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+GG++Y +PLGG ++ QP A+GGSGS+Y+YG+ D +K+GMTKEE + V + LA+ R
Sbjct: 133 KGGQVYVIPLGGMMLRQPVAMGGSGSTYVYGYVDAHFKKGMTKEECLEFVTNTLGLAMYR 192
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
DG+SGGV+R I +GV RK GD +P ++++
Sbjct: 193 DGSSGGVIRLAVITKDGVERKVLTGDEIPKFYQD 226
>gi|323455949|gb|EGB11816.1| hypothetical protein AURANDRAFT_52186 [Aureococcus anophagefferens]
Length = 236
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 24/166 (14%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q VSDYVR++L H I++G+P VK AANL + + Y NK L G+IV G D +
Sbjct: 69 SAADTQAVSDYVRHYLGSHAIEVGKPPLVKTAANLAKRICYTNKEQLLAGVIVAGHDDAD 128
Query: 71 GGKIYGVPLG------------------------GTIIEQPFAIGGSGSSYLYGFFDQAW 106
GG +Y +PLG GT ++ PFAIGGSGS+Y+YG D +
Sbjct: 129 GGSVYVIPLGGARPRPPFAFSARARRRRRRRAAAGTCLKVPFAIGGSGSTYIYGHVDHTY 188
Query: 107 KEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
K M+ E + V +AV+ A+ RDG+SGG++R V IN++GV R+++
Sbjct: 189 KPNMSLAECKVFVKEAVTRAMCRDGSSGGIIRLVCINADGVEREYH 234
>gi|412991418|emb|CCO16263.1| predicted protein [Bathycoccus prasinos]
Length = 241
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 103/164 (62%), Gaps = 17/164 (10%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL-------------GQPATVKVAANLVRLLSYNNKNFLQ 58
AAD+Q V+ YV+ + +H ++ V+V A L + ++Y NK LQ
Sbjct: 65 AADTQNVAAYVKRMVEEHAMERNGTGFRENESNDRAMMVDVRVVAKLTQKIAYENKEKLQ 124
Query: 59 TGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQL 118
GMI+ GWD+ G ++YG+PLGG+++E PF++ GSGS+Y+YG+ D +KE M +EE E+
Sbjct: 125 AGMIIAGWDRVRGPQVYGIPLGGSMLEAPFSVSGSGSAYIYGYLDNTYKENMEREECEKW 184
Query: 119 VVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
+ +A+SLAIARD +SGGV+R VTI+ G ++ LP H+
Sbjct: 185 MTEAISLAIARDASSGGVIRLVTIHENGCEKQC----VLPKDHK 224
>gi|224473815|gb|ACN49156.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 94/151 (62%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H++Q+ P V AA++++ L YNNK+ LQ G I GWDK +G
Sbjct: 67 ADAQAVTKTAKFQLSFHSVQMENPPLVIAAASILKELCYNNKDELQAGFITAGWDKKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I QP IGGSGS+Y+YG+ D +K MT+EE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGVV V I G PGD LP + +E
Sbjct: 187 SGGVVNLVVITEAGAEHIVIPGDKLPTFSDE 217
>gi|224473798|gb|ACN49142.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 94/151 (62%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H++Q+ P V AA++++ L YNNK+ LQ G I GWDK +G
Sbjct: 67 ADAQAVTKTAKFQLSFHSVQMENPPLVIAAASILKELCYNNKDELQAGFITAGWDKKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I QP IGGSGS+Y+YG+ D +K MT+EE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGVV V I G PGD LP + +E
Sbjct: 187 SGGVVNLVVITEAGAEHIVIPGDKLPTFSDE 217
>gi|116200766|ref|XP_001226195.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175642|gb|EAQ83110.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 212
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T + AA + + L Y NK+ L G+I+ GWD+ G
Sbjct: 61 AADTQAVADIVKYQLELFAMTNGKPPTTQTAAAIFQELCYANKDRLSAGLIIAGWDERHG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +QP++IGGSGS+Y+YGF D W+EGM + +A V A+ AI DG
Sbjct: 121 GQVYSIPLGGSLHKQPYSIGGSGSTYIYGFCDANWREGMEEADAVSFVKDALKEAIKWDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + ++G R Y DT
Sbjct: 181 SSGGVIRMVVLTAKGADRHLYLPDT 205
>gi|70987129|ref|XP_749045.1| proteasome component Pre3 [Aspergillus fumigatus Af293]
gi|66846675|gb|EAL87007.1| proteasome component Pre3, putative [Aspergillus fumigatus Af293]
gi|159123184|gb|EDP48304.1| proteasome component Pre3, putative [Aspergillus fumigatus A1163]
Length = 221
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I +P + +VAA L + L Y NK+ L G+I+
Sbjct: 60 CCRS-GSAADTQAVADIVSYHLNMYGIVNNEPPSTQVAAALFQELCYENKDMLSAGIIIA 118
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +QP+AIGGSGS+Y+YG+ D WKE MT+EE + V A+
Sbjct: 119 GYDPRHGGQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDAHWKENMTEEEGIKFVRDALQ 178
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + S G R Y DT
Sbjct: 179 EAIKWDGSSGGVIRLVVLTSRGSERHLYLPDT 210
>gi|349803681|gb|AEQ17313.1| putative proteasome ( macropain) beta 9 [Pipa carvalhoi]
Length = 159
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 101/152 (66%), Gaps = 2/152 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y + H+I++ V AANLV+ +SY K + +IV GWD+
Sbjct: 9 SAADAQAVADMAHY-MEVHSIEMEDAPLVLAAANLVKGISYKYKEEIVAHLIVAGWDRKN 67
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG I QPFAIGGSGS+Y+YG+ D +K GM+KEE E+ V+A+SLA+ RD
Sbjct: 68 GGQVYGT-LGGMITRQPFAIGGSGSTYIYGYVDSVFKPGMSKEECERFAVQALSLAMHRD 126
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGGV+ VT+ +G GD++P +++
Sbjct: 127 GSSGGVIYLVTVTKDGTKDTIISGDSIPRFYD 158
>gi|62122594|dbj|BAD93262.1| PSMB9-like [Oryzias latipes]
Length = 217
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 94/151 (62%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+ P V AA++++ L YNNK LQ G I GWDK +G
Sbjct: 67 ADAQAVTKTAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDKKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I QP IGGSGS+Y+YG+ D +K MT+EE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I GV PGD LP +++E
Sbjct: 187 SGGVANLVVITEAGVEHIVIPGDKLPRFNDE 217
>gi|209737824|gb|ACI69781.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|209738640|gb|ACI70189.1| Proteasome subunit beta type-9 precursor [Salmo salar]
Length = 217
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V L G + Q FA+GGSGS+Y+YGF D +++ M+KE+ +Q VV +SLA++RDG
Sbjct: 127 GQVY-VTLNGLLSRQSFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ +G K G+ LP ++++
Sbjct: 186 SSGGVAYLVTIDEKGAEEKCILGNELPTFYDQ 217
>gi|224473797|gb|ACN49141.1| proteasome beta 9 subunit [Oryzias dancena]
gi|224473814|gb|ACN49155.1| proteasome beta 9 subunit [Oryzias dancena]
Length = 216
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++ + V+ AA LV+ +SY K L +IV GWD+ EG
Sbjct: 66 AADAQTIAEMVNYQLDVHSIEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRREG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ L G + QPFAIGGSGSSY+YGF D ++ GMTKEE ++ VV ++LA+ RDG
Sbjct: 126 GQVFAT-LSGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 185 SSGGVAYMVTIDEHSTEEKVVLGNDLPTFFDQ 216
>gi|21263862|sp|Q8UW64.1|PSB9_ORYLA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|18478982|dbj|BAB84548.1| PSMB9 [Oryzias latipes]
gi|62122593|dbj|BAD93261.1| PSMB9 [Oryzias latipes]
gi|295901494|dbj|BAJ07258.1| proteasome subunit, beta type 9 [Oryzias latipes]
gi|295901520|dbj|BAJ07277.1| proteasome subunit, beta type 9 [Oryzias latipes]
gi|295901524|dbj|BAJ07279.1| proteasome subunit, beta type 9 [Oryzias latipes]
Length = 217
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++ + V+ AA LV+ +SY K L +IV GWD+ +G
Sbjct: 67 AADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ LGG + QPFAIGGSGSSY+YGF D ++ GMTKEE ++ VV ++LA+ RDG
Sbjct: 127 GQVFAT-LGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 186 SSGGVAYIVTIDEHSTDEKVILGNDLPTFFDQ 217
>gi|432882597|ref|XP_004074109.1| PREDICTED: LMP2 [Oryzias latipes]
gi|58220850|dbj|BAB83845.1| PSMB9 [Oryzias latipes]
gi|295901522|dbj|BAJ07278.1| proteasome subunit, beta type 9 [Oryzias latipes]
Length = 216
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++ + V+ AA LV+ +SY K L +IV GWD+ +G
Sbjct: 66 AADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ LGG + QPFAIGGSGSSY+YGF D ++ GMTKEE ++ VV ++LA+ RDG
Sbjct: 126 GQVFAT-LGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 185 SSGGVAYIVTIDEHSTDEKVILGNDLPTFFDQ 216
>gi|2055311|dbj|BAA19766.1| LMP2 [Oryzias latipes]
Length = 213
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++ + V+ AA LV+ +SY K L +IV GWD+ +G
Sbjct: 63 AADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ LGG + QPFAIGGSGSSY+YGF D ++ GMTKEE ++ VV ++LA+ RDG
Sbjct: 123 GQVFAT-LGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDG 181
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ K G+ LP + ++
Sbjct: 182 SSGGVAYIVTIDEHSTDEKVILGNDLPTFFDQ 213
>gi|18859271|ref|NP_571227.1| proteasome subunit beta type-6 [Danio rerio]
gi|2654062|gb|AAB87681.1| proteasome subunit Y [Danio rerio]
Length = 223
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 98/147 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L H+I+L + V+ AA+L R + Y + L G+IV GWD+ G
Sbjct: 72 AADTQAIADAVTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVAGWDRRRG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG + QP ++GGSGSSY+YG+ D ++ GM+KEE + A++L + RDG
Sbjct: 132 GQVYTVPVGGMLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLPMERDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGGVVR I+ +GV R+ G+ LP
Sbjct: 192 SSGGVVRLAVISEQGVERQAILGNQLP 218
>gi|344298834|ref|XP_003421096.1| PREDICTED: proteasome subunit beta type-9-like [Loxodonta africana]
Length = 219
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMATYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG L G + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LEGMLNRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAITLAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGG++ VTI + GV + GD LP +++E
Sbjct: 187 SSSGGIIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|422296113|gb|EKU23412.1| 20S proteasome subunit beta 1, partial [Nannochloropsis gaditana
CCMP526]
Length = 190
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++DYVRYFL H I LG+ V AA L+ L Y NK+ L G+
Sbjct: 62 HIYCCRS-GSAADTQALADYVRYFLASHAIDLGRTPAVYTAAKLMSTLIYRNKDNLLAGV 120
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+GGWD +GG++Y V LGGT+ Q F+IGGSGS+Y+YG D+A+KE MT+EE + V K
Sbjct: 121 IIGGWDPKDGGQVYTVTLGGTLQRQKFSIGGSGSTYIYGHVDEAFKENMTREECQNFVKK 180
Query: 122 AVSLAIARDG 131
A+S A+ARDG
Sbjct: 181 AISHAMARDG 190
>gi|119177181|ref|XP_001240403.1| proteasome component precursor [Coccidioides immitis RS]
gi|303316125|ref|XP_003068067.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107743|gb|EER25922.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032435|gb|EFW14388.1| proteasome component [Coccidioides posadasii str. Silveira]
gi|392867634|gb|EAS29116.2| proteasome component PRE3 [Coccidioides immitis RS]
Length = 231
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 96/141 (68%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D VRY L + + QP T + AA L + L Y+NK+ L G+I+ G+D G
Sbjct: 79 AADTQAVADIVRYHLGMYGVVYDQPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDHRHG 138
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V A+ AI DG
Sbjct: 139 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDAHWREGMTEEEGIEFVKGALHEAIKWDG 198
Query: 132 ASGGVVRTVTINSEGVSRKFY 152
+SGGV+R V + ++G R Y
Sbjct: 199 SSGGVIRLVVLTAKGAVRHLY 219
>gi|291237254|ref|XP_002738546.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
isoform 2 [Saccoglossus kowalevskii]
Length = 185
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 93/132 (70%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
I++ +P VK AANL + + YN ++ L G+I GWD+ EGG++Y +PLGG ++ QPF+I
Sbjct: 53 IEMNEPPLVKTAANLFKEMCYNYRDELTAGIICAGWDEREGGQVYTIPLGGMLLRQPFSI 112
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
GGSGS+Y+YG+ D ++K+ MTKEE + +++LA+ RDG+SGGVVR I EGV R
Sbjct: 113 GGSGSTYIYGYVDSSFKKDMTKEECLKFCAHSLALAMNRDGSSGGVVRLAAITKEGVERH 172
Query: 151 FYPGDTLPLWHE 162
G+ LP ++E
Sbjct: 173 VILGNELPRFYE 184
>gi|225704850|gb|ACO08271.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
Length = 212
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 91/141 (64%)
Query: 23 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 82
++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V LGG
Sbjct: 72 KFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGM 131
Query: 83 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
++ QPF IGGSGS+Y+YG+ D +K M++EE Q A++LA+ RD SGGV V I
Sbjct: 132 LLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGGVAHLVVI 191
Query: 143 NSEGVSRKFYPGDTLPLWHEE 163
EGV PGD LP +H+E
Sbjct: 192 TEEGVEHVVIPGDKLPKFHDE 212
>gi|426250991|ref|XP_004019215.1| PREDICTED: proteasome subunit beta type-9, partial [Ovis aries]
Length = 205
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ EG
Sbjct: 55 AADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREG 114
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG + G +I QPFAIGGSGS+Y+YG+ D A+K GM+ EE A++LA+ RDG
Sbjct: 115 GQVYGT-MSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRCFTTNAIALAMKRDG 173
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+ VTI GV + G+ LP +++E
Sbjct: 174 SSGGVIYLVTITGAGVDHQVILGNELPKFYDE 205
>gi|322694306|gb|EFY86139.1| proteasome component PRE3 precursor [Metarhizium acridum CQMa 102]
Length = 224
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 73 AADTQAVADIVQYQLGLFAMHSGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFG 132
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM KEEA V A+ AI DG
Sbjct: 133 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEKEEAVNFVKGALREAIKWDG 192
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + EG R Y DT
Sbjct: 193 SSGGVIRMVVLTKEGADRHLYLPDT 217
>gi|351703553|gb|EHB06472.1| Proteasome subunit beta type-9 [Heterocephalus glaber]
Length = 196
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V D Y L H ++L P V AANLV+ ++Y + L +I+ GWD+ E
Sbjct: 45 SAADAQAVVDMAAYQLELHGLELEAPPLVLAAANLVKNITYKYREELLAHLIIAGWDQRE 104
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QP I GSGS+Y+YG+ D A+K GM+ EE + A++LAI+RD
Sbjct: 105 GGQVYGT-LGGMLTRQPLIISGSGSTYIYGYVDAAYKAGMSPEECRRFTTDAIALAISRD 163
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
GASGGVV VTI + GV + G+ LP +++E
Sbjct: 164 GASGGVVYLVTITAAGVDHRIVLGNELPKFYDE 196
>gi|322709180|gb|EFZ00756.1| proteasome component PRE3 precursor [Metarhizium anisopliae ARSEF
23]
Length = 197
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 46 AADTQAVADIVQYQLGLFAMHSGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFG 105
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM KEEA V A+ AI DG
Sbjct: 106 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEKEEAVNFVKGALREAIKWDG 165
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + EG R Y DT
Sbjct: 166 SSGGVIRMVVLTKEGADRHLYLPDT 190
>gi|440634035|gb|ELR03954.1| 20S proteasome subunit beta 1 [Geomyces destructans 20631-21]
Length = 229
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + IQ G P T +VAA + + L YNNK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVHYQLGMYGIQNGAPPTTQVAAAMFQELCYNNKDRLSAGLIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EG + EA V A++
Sbjct: 131 GWDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWQEGFEEAEAVDFVKGALT 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + +G R Y D
Sbjct: 191 EAIKWDGSSGGVIRMVVLTKKGAVRHLYLPD 221
>gi|317034265|ref|XP_001396260.2| proteasome component PRE3 [Aspergillus niger CBS 513.88]
Length = 232
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ ++I + + +VAA+L + L Y NK+ L G+I+
Sbjct: 73 CCRS-GSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIA 131
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +QPF+IGGSGS+Y+YG+ D W+E MT+EE V A+
Sbjct: 132 GYDPKHGGQVYSIPLGGSLHKQPFSIGGSGSTYIYGYCDAHWRENMTEEEGINFVRGALQ 191
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + S G R Y DT
Sbjct: 192 EAIKWDGSSGGVIRLVVLTSRGAQRHLYLPDT 223
>gi|350638962|gb|EHA27317.1| hypothetical protein ASPNIDRAFT_44752 [Aspergillus niger ATCC 1015]
Length = 227
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ ++I + + +VAA+L + L Y NK+ L G+I+
Sbjct: 68 CCRS-GSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIA 126
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +QPF+IGGSGS+Y+YG+ D W+E MT+EE V A+
Sbjct: 127 GYDPKHGGQVYSIPLGGSLHKQPFSIGGSGSTYIYGYCDAHWRENMTEEEGINFVRGALQ 186
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + S G R Y DT
Sbjct: 187 EAIKWDGSSGGVIRLVVLTSRGAQRHLYLPDT 218
>gi|229367654|gb|ACQ58807.1| Proteasome subunit beta type-9 precursor [Anoplopoma fimbria]
Length = 216
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H++++ + V+ AA+LVR +SY K L +IV GWD+ +G
Sbjct: 66 AADAQTIAEIVNYQLDVHSVEIDEDPQVRSAASLVRNISYKYKEELSAHLIVAGWDRRDG 125
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+++ L G + QPFA+GGSGSSY+YGF D ++ M+KEE +Q VV +SLA+ RDG
Sbjct: 126 GQVFAT-LSGLLTRQPFAVGGSGSSYVYGFVDAEYRRDMSKEECQQFVVNTLSLAMNRDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV V+I+ G K G+ LP + ++
Sbjct: 185 SSGGVAYIVSIDEHGTEEKVVLGNDLPTFFDQ 216
>gi|410925072|ref|XP_003976005.1| PREDICTED: proteasome subunit beta type-6-like [Takifugu rubripes]
Length = 232
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H+I+L +P V+ AANL + Y + L G+
Sbjct: 72 RIFCCRS-GSAADTQAIADVVTYQLGFHSIELDEPPLVETAANLFKASCYRYREELTAGI 130
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
+V GWD+ +GG++Y VP+GG ++ QP ++GGSGSSY+YGF D +K G++KE+ +L
Sbjct: 131 LVAGWDRRKGGQVYSVPIGGMLVRQPVSVGGSGSSYIYGFMDSNYKPGLSKEQCLELAAA 190
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A+SLA+ RDG+SGGV+R +I+ +GV R+ G+ LP
Sbjct: 191 ALSLAMERDGSSGGVIRLASISEDGVERRVILGNQLP 227
>gi|464445|sp|P28077.2|PSB9_RAT RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|286252|dbj|BAA01589.1| proteasome subunit R-RING12 [Rattus sp.]
Length = 219
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L ++V GWD++E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPFAIGGSGS+Y+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI ++GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITADGVDHRVILGDELPKFYDE 219
>gi|189193797|ref|XP_001933237.1| proteasome subunit beta type-9 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978801|gb|EDU45427.1| proteasome subunit beta type-9 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 224
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + +P T + AA + + L Y+NK+ L G+I+
Sbjct: 66 CCRS-GSAADTQAVADIVHYHLGMYGTTNDEPPTTQTAAAIFQELCYSNKDQLSAGLIIA 124
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGMT+EE + V A+S
Sbjct: 125 GWDHRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWKEGMTEEEGIKFVKGALS 184
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + +G R Y
Sbjct: 185 EAIKWDGSSGGVIRMVVLTGKGAQRHLY 212
>gi|367047641|ref|XP_003654200.1| hypothetical protein THITE_2117002 [Thielavia terrestris NRRL 8126]
gi|347001463|gb|AEO67864.1| hypothetical protein THITE_2117002 [Thielavia terrestris NRRL 8126]
Length = 229
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L ++ G+P T + AA + + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVKYQLELFSMMNGKPPTTQTAAAIFQEICYANKDRLTAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG++ +QP+AIGGSGS+Y+YGF D W+EGM + A V A+ AI DG
Sbjct: 138 GQVYSIPIGGSLHKQPYAIGGSGSTYIYGFCDAHWREGMDEAAAVDFVKAALQEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + ++G R Y DT
Sbjct: 198 SSGGVIRLVVLTAKGADRHLYLPDT 222
>gi|134081009|emb|CAK41521.1| unnamed protein product [Aspergillus niger]
Length = 199
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L+ ++I + + +VAA+L + L Y NK+ L G+I+ G+D G
Sbjct: 46 AADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIAGYDPKHG 105
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +QPF+IGGSGS+Y+YG+ D W+E MT+EE V A+ AI DG
Sbjct: 106 GQVYSIPLGGSLHKQPFSIGGSGSTYIYGYCDAHWRENMTEEEGINFVRGALQEAIKWDG 165
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + S G R Y DT
Sbjct: 166 SSGGVIRLVVLTSRGAQRHLYLPDT 190
>gi|242796933|ref|XP_002482907.1| proteasome component Pre3, putative [Talaromyces stipitatus ATCC
10500]
gi|218719495|gb|EED18915.1| proteasome component Pre3, putative [Talaromyces stipitatus ATCC
10500]
Length = 231
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I +P + + AA L + L Y+NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVSYHLNMYGIVNNEPPSTQTAAALFQELCYDNKDQLSAGIIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGMT+EE V A+S
Sbjct: 131 GYDRRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMTEEEGVNFVKSALS 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 191 EAIKWDGSSGGVIRLVVLTAKGAVRHLY 218
>gi|258564394|ref|XP_002582942.1| proteasome component PRE3 [Uncinocarpus reesii 1704]
gi|237908449|gb|EEP82850.1| proteasome component PRE3 [Uncinocarpus reesii 1704]
Length = 244
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D VRY L + + QP T + AA L + L Y+NK+ L G+I+
Sbjct: 86 CCRS-GSAADTQAVADIVRYHLGMYGVVYDQPPTTQTAAALFQELCYDNKDMLSAGIIIA 144
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM++ E + V A+
Sbjct: 145 GYDHRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDAHWREGMSEAEGVEFVKGALQ 204
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + ++G R Y DT
Sbjct: 205 EAIKWDGSSGGVIRLVVLTAKGAVRHLYLPDT 236
>gi|393215686|gb|EJD01177.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 237
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y+ + Q + V A L + + Y+NK L +I
Sbjct: 57 IYCCRS-GSAADTQAIADIVHYYSQMYNQQYSERPPVHSVATLFQRMCYSNKEQLSASII 115
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +PLGG I QP+AIGGSGS+Y+YG+ D ++EG ++E V
Sbjct: 116 VAGWDKEVGPSVYNIPLGGGIFRQPWAIGGSGSTYVYGYCDATYREGWGRDETVNFVKNT 175
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 182
++LA++RDG+SGGV+R I GV R F PG+ LP + E E D+ + PEPM
Sbjct: 176 LALAMSRDGSSGGVIRMCVITESGVERLFVPGNELPKFWEGKEVLGGAGDVEPI--PEPM 233
>gi|169601484|ref|XP_001794164.1| hypothetical protein SNOG_03608 [Phaeosphaeria nodorum SN15]
gi|160705938|gb|EAT88813.2| hypothetical protein SNOG_03608 [Phaeosphaeria nodorum SN15]
Length = 198
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + I +P T + AA + + L Y+NK+ L GMI+
Sbjct: 40 CCRS-GSAADTQAVADIVHYHLGMYGITNDEPPTTQTAAAIFQELCYSNKDQLSAGMIIA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM++E+ V A++
Sbjct: 99 GWDQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWKEGMSEEDGISFVKGALA 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 159 EAIKWDGSSGGVIRMVVLTAKGAQRHLY 186
>gi|119482712|ref|XP_001261384.1| proteasome component Pre3, putative [Neosartorya fischeri NRRL 181]
gi|119409539|gb|EAW19487.1| proteasome component Pre3, putative [Neosartorya fischeri NRRL 181]
Length = 229
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I +P + +VAA L + L Y NK+ L G+I+
Sbjct: 68 CCRS-GSAADTQAVADIVSYHLNMYGIVNNEPPSTQVAAALFQELCYENKDMLSAGIIIA 126
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKE MT+EE + V A+
Sbjct: 127 GYDPRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDAHWKENMTEEEGIKFVRDALQ 186
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + S G R Y DT
Sbjct: 187 EAIKWDGSSGGVIRLVVLTSRGAERHLYLPDT 218
>gi|10803372|emb|CAC13119.1| low molecular mass polypeptide subunit PSMB9-L [Takifugu rubripes]
Length = 217
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 92/151 (60%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H++Q+ P V AA++++ L Y NK LQ G I GWD +G
Sbjct: 67 ADAQAVTKAAKFHLSFHSVQMETPPLVISAASVLKELCYQNKEELQAGFITAGWDSRKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QP IGGSGSSY+YG+ D +K M++EE Q A++LA+ RD
Sbjct: 127 QVYVVALGGMLVRQPVTIGGSGSSYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I GV PGD LP +H+E
Sbjct: 187 SGGVANLVVITETGVEHLVVPGDKLPRFHDE 217
>gi|331231656|ref|XP_003328491.1| 20S proteasome subunit beta 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309307481|gb|EFP84072.1| 20S proteasome subunit beta 1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 219
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD-KYE 70
AAD+Q V+DYV + +T Q G +V + + Y+NK+ L G+IV GWD + +
Sbjct: 67 AADTQAVADYVHLYCQMYTAQHGHAPSVHTVGTIFEQICYSNKDNLSAGIIVAGWDAQTK 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y +PLGG + +QP+AIGGSGS+Y+YG+ D ++ G TKEE V A++LA++RD
Sbjct: 127 KGSVYNIPLGGGLFQQPWAIGGSGSTYIYGYCDSNYRAGWTKEETVGFVKNALALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
G+SGG +R I + V R F PG+ LP++ E
Sbjct: 187 GSSGGTIRMAIITEDKVERVFIPGNQLPVFWE 218
>gi|171680727|ref|XP_001905308.1| hypothetical protein [Podospora anserina S mat+]
gi|170939991|emb|CAP65217.1| unnamed protein product [Podospora anserina S mat+]
Length = 230
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 98/145 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T + AA + + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLFHMMNGKPPTTQTAAAIFQEMCYANKDRLSAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +QP+AIGGSGS+Y+YG+ D WKEGM + +A V +++ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDANWKEGMEEADAVNFVKESLKEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + ++G R Y DT
Sbjct: 198 SSGGVIRMVVLTAKGADRHLYLPDT 222
>gi|378725726|gb|EHY52185.1| proteasome component PRE3 [Exophiala dermatitidis NIH/UT8656]
Length = 233
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + I +P T + AA L + L Y+NK+ L G+I+
Sbjct: 73 CCRS-GSAADTQAVADIVQYHLGIYGIMNNEPPTTQTAAALFQELCYDNKDQLSAGIIIA 131
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+DK GG++Y +PLGG++ + P+AI GSGS+Y+YGF D WKEGMT+EE V A+
Sbjct: 132 GYDKRNGGQVYSIPLGGSLHKGPYAIAGSGSTYIYGFCDAHWKEGMTEEEGVDFVKNALR 191
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 192 EAIKWDGSSGGVIRMVVLTAKGAQRHLY 219
>gi|348541141|ref|XP_003458045.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Oreochromis niloticus]
Length = 217
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V ++ L H++Q+ P V AA++++ L Y NK+ LQ G + GWDK G
Sbjct: 67 ADAQAVIKAAKFHLSFHSVQMESPPQVIAAASVLKDLCYKNKDELQAGFLTAGWDKKNGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I Q IGGSGS+Y+YG+ D +K MTKEE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMLISQQVTIGGSGSTYIYGYVDAKYKPNMTKEECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I +GV PGD LP +H+E
Sbjct: 187 SGGVAHLVVITEKGVEHVVVPGDKLPKFHDE 217
>gi|83765122|dbj|BAE55265.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 227
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ ++I + + +VAA+L + L Y NK+ L G+I+
Sbjct: 68 CCRS-GSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIA 126
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +QP++IGGSGS+Y+YG+ D WKE MT+EE V A+
Sbjct: 127 GYDPRHGGQVYSIPLGGSLHKQPYSIGGSGSTYIYGYCDANWKENMTEEEGINFVRGALR 186
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + ++G R Y DT
Sbjct: 187 EAIKWDGSSGGVIRLVVLTAKGAQRHLYLPDT 218
>gi|400595613|gb|EJP63405.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +Q G+P + AA++ + L Y NK+ L G+I+ GWD+ G
Sbjct: 61 AADTQAVADIVQYQLGMFAMQSGKPPMTQTAASIFQELCYANKDRLSAGLIIAGWDERFG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + EA V A+ AI DG
Sbjct: 121 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEEAEAVSFVKGALREAIKWDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + ++G R Y DT
Sbjct: 181 SSGGVIRMVVLTAKGADRHLYLPDT 205
>gi|238482157|ref|XP_002372317.1| proteasome component Pre3, putative [Aspergillus flavus NRRL3357]
gi|317139101|ref|XP_001817267.2| proteasome component PRE3 [Aspergillus oryzae RIB40]
gi|220700367|gb|EED56705.1| proteasome component Pre3, putative [Aspergillus flavus NRRL3357]
gi|391864608|gb|EIT73903.1| 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3
[Aspergillus oryzae 3.042]
Length = 232
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 100/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ ++I + + +VAA+L + L Y NK+ L G+I+
Sbjct: 73 CCRS-GSAADTQAVADIVSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIA 131
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +QP++IGGSGS+Y+YG+ D WKE MT+EE V A+
Sbjct: 132 GYDPRHGGQVYSIPLGGSLHKQPYSIGGSGSTYIYGYCDANWKENMTEEEGINFVRGALR 191
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + ++G R Y DT
Sbjct: 192 EAIKWDGSSGGVIRLVVLTAKGAQRHLYLPDT 223
>gi|354487579|ref|XP_003505949.1| PREDICTED: proteasome subunit beta type-9-like [Cricetulus griseus]
gi|344253003|gb|EGW09107.1| Proteasome subunit beta type-9 [Cricetulus griseus]
Length = 219
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPFAIGGSGS+Y+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDSAYKAGMTPEECRRFTTNAIALAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITATGVDHRVILGDELPKFYDE 219
>gi|406864245|gb|EKD17291.1| proteasome A-type and B-type [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 229
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + IQ G+ T + AA + + L Y NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVHYQLGMYGIQNGREPTTQTAAAMFQELCYENKDRLSAGLIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + A + V A+
Sbjct: 131 GWDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWKEGMDEAAAVEFVKGALQ 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + ++G +R Y DT
Sbjct: 191 EAIKWDGSSGGVIRMVVLTAKGANRHLYLPDT 222
>gi|18124172|gb|AAL59853.1|AF357921_1 proteasome beta-subunit [Heterodontus francisci]
Length = 217
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L H+I++ V+ AA++V+ +SY K L +IV GWD+ +
Sbjct: 66 SAADAQAIADSVNYQLELHSIEVDDAPLVRAAASMVKNISYKYKEELSAHLIVAGWDRKK 125
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y LGG ++ QPFA+GGSGS Y+YG+ D A+K GM+K+E + V A++LAI RD
Sbjct: 126 RGQVYAT-LGGMLVRQPFAVGGSGSVYIYGYVDAAYKAGMSKDECLRFVTNAITLAIGRD 184
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ I + K G+ LP +H+E
Sbjct: 185 GSSGGVIYLTAIAEKATEHKVILGNELPQFHDE 217
>gi|224473832|gb|ACN49171.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 217
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 93/151 (61%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+ P V AA++++ L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKTAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG +I QP IGGSGS+Y+YG+ D +K MT+EE Q A++LA+ RD
Sbjct: 127 QVYVVSLGGMLIGQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I GV PGD LP + +E
Sbjct: 187 SGGVANLVVITEAGVEHIVIPGDKLPRFSDE 217
>gi|258614009|ref|NP_036840.2| proteasome subunit beta type-9 [Rattus norvegicus]
gi|46237560|emb|CAE83940.1| proteasome (prosome, macropain) subunit, beta type, 9 [Rattus
norvegicus]
gi|60688585|gb|AAH91161.1| Proteasome (prosome, macropain) subunit, beta type 9 (large
multifunctional peptidase 2) [Rattus norvegicus]
gi|149043360|gb|EDL96811.1| proteosome (prosome, macropain) subunit, beta type 9 [Rattus
norvegicus]
Length = 219
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L ++V GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPFAIGGSGS+Y+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI ++GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITADGVDHRVILGDELPKFYDE 219
>gi|410931044|ref|XP_003978906.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 1 [Takifugu rubripes]
Length = 217
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H++Q+ P V AA++++ L Y NK LQ G I GWD +G
Sbjct: 67 ADAQAVTKAAKFHLSFHSVQMETPPLVISAASVLKELCYQNKEELQAGFITAGWDSRKGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QP IGGSGS+Y+YG+ D +K M++EE Q A++LA+ RD
Sbjct: 127 QVYVVALGGMLVRQPVTIGGSGSTYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNV 186
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I GV PGD LP +H+E
Sbjct: 187 SGGVANLVVITETGVEHLVVPGDKLPRFHDE 217
>gi|295658156|ref|XP_002789640.1| proteasome component PRE3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283125|gb|EEH38691.1| proteasome component PRE3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 104/168 (61%), Gaps = 7/168 (4%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + I +P T + AA L + L Y+NK+ L G+I+
Sbjct: 40 CCRS-GSAADTQAVADIVHYHLGMYGIVNKEPPTTQTAAALFQELCYDNKDMLSAGIIIA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 99 GYDQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQ 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKF------YPGDTLPLWHEELEP 166
AI DG+SGGV+R V + ++G R Y G +P + + P
Sbjct: 159 EAIKWDGSSGGVIRMVVLTAKGAVRHLYLPDNGYTGPAIPNYSSNIHP 206
>gi|320587372|gb|EFW99852.1| proteasome component [Grosmannia clavigera kw1407]
Length = 229
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T + AA + + L Y+NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLFAMLNGKPPTTQTAAAIFQELCYSNKDQLSAGLIIAGWDERYG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM K+EA V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDSNWREGMEKDEAVDFVKGALKEAIRWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y DT
Sbjct: 198 SSGGVIRMVVLTRDGADRHLYLPDT 222
>gi|296413642|ref|XP_002836518.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630345|emb|CAZ80709.1| unnamed protein product [Tuber melanosporum]
Length = 229
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y+L + +Q +P T +VAA++ + L Y+NK+ LQ MI+ G+D
Sbjct: 78 AADTQAIADIVHYYLQLYNVQNHEPPTTQVAASIFQELCYSNKDQLQASMIIAGYDARHK 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKE MT+ E + V A++ A+ DG
Sbjct: 138 GEVYSIPLGGSLHKQRYAIGGSGSTYIYGYCDANWKENMTEGECVEFVKGALAEAVKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + GV RK F+P
Sbjct: 198 SSGGVIRMVVLTERGVERKIFFP 220
>gi|17380242|sp|O35524.1|PSB9_MUSSI RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467365|dbj|BAA22584.1| low molecular mass polypeptide complex subunit 2 [Mus spicilegus]
Length = 219
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPRFYDE 219
>gi|3811395|gb|AAC69911.1| LMP 2 [Mus musculus]
Length = 199
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 48 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQCE 107
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 108 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRD 166
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 167 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 199
>gi|358373086|dbj|GAA89686.1| proteasome component Pre3 [Aspergillus kawachii IFO 4308]
Length = 232
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I + + +VAA+L + L Y NK+ L G+I+
Sbjct: 73 CCRS-GSAADTQAVADIVSYHLNMYAITNNEAPSTQVAASLFQELCYENKDMLSAGIIIA 131
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +QP++IGGSGS+Y+YG+ D W+E MT+EE V A+
Sbjct: 132 GYDPKHGGQVYSIPLGGSLHKQPYSIGGSGSTYIYGYCDTHWRENMTEEEGINFVRGALQ 191
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + S G R Y DT
Sbjct: 192 EAIKWDGSSGGVIRLVVLTSRGAQRHLYLPDT 223
>gi|164429302|ref|XP_958142.2| proteasome component PRE3 precursor [Neurospora crassa OR74A]
gi|157073426|gb|EAA28906.2| proteasome component PRE3 precursor [Neurospora crassa OR74A]
gi|336466804|gb|EGO54968.1| proteasome component PRE3 precursor [Neurospora tetrasperma FGSC
2508]
gi|350288605|gb|EGZ69841.1| proteasome component PRE3 precursor [Neurospora tetrasperma FGSC
2509]
Length = 229
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 101/152 (66%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + + G+P T ++AA + + ++Y NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVQYQLGLYHMVNGRPPTTQIAAAVFQEIAYANKDRLTAGLIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +QP++IGGSGS+Y+YG+ D WKEGM + EA V +A+
Sbjct: 131 GWDARHGGQVYNIPLGGSLHKQPYSIGGSGSTYIYGYCDANWKEGMEEAEAVAFVKEALK 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + +G R Y D+
Sbjct: 191 EAIKWDGSSGGVIRMVVLTEKGADRHLYLPDS 222
>gi|8567394|ref|NP_038613.1| proteasome subunit beta type-9 [Mus musculus]
gi|984353|gb|AAA75306.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|2073368|dbj|BAA19855.1| low-molecular-weight polypeptide 2 [Mus musculus]
gi|2467361|dbj|BAA22582.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
molossinus]
gi|2555189|gb|AAB81528.1| 20S proteasome subunit lmp2 [Mus musculus]
gi|12842607|dbj|BAB25664.1| unnamed protein product [Mus musculus]
Length = 219
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQCE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|130856|sp|P28076.1|PSB9_MOUSE RecName: Full=Proteasome subunit beta type-9; AltName: Full=LMP-2d;
AltName: Full=Low molecular mass protein 2; AltName:
Full=Macropain chain 7; AltName: Full=Multicatalytic
endopeptidase complex chain 7; AltName: Full=Proteasome
chain 7; AltName: Full=Proteasome subunit beta-1i;
AltName: Full=Really interesting new gene 12 protein;
Flags: Precursor
gi|237568|gb|AAB20105.1| low molecular mass polypeptide complex subunit 2 [Mus sp.]
gi|984349|gb|AAA75304.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|984351|gb|AAA75305.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|1209537|gb|AAA98932.1| low molecular weight protein 2 Lmp2 [Mus musculus]
gi|2467355|dbj|BAA22579.1| low molecular mass polypeptide complex subunit 2 [Mus musculus]
gi|2467359|dbj|BAA22581.1| low molecular mass polypeptide complex subunit 2 [Mus spretus]
gi|2467363|dbj|BAA22583.1| low molecular mass polypeptide complex subunit 2 [Mus spretus]
gi|71059783|emb|CAJ18435.1| LMP-2 [Mus musculus]
gi|109732865|gb|AAI16365.1| Psmb9 protein [Mus musculus]
gi|228222|prf||1718343A LMP-2 gene
Length = 219
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|378792428|pdb|3UNF|N Chain N, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792442|pdb|3UNF|BB Chain b, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792456|pdb|3UNH|N Chain N, Mouse 20s Immunoproteasome
gi|378792470|pdb|3UNH|BB Chain b, Mouse 20s Immunoproteasome
Length = 199
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 48 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 107
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 108 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRD 166
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 167 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 199
>gi|148678311|gb|EDL10258.1| proteosome (prosome, macropain) subunit, beta type 9 (large
multifunctional peptidase 2), isoform CRA_b [Mus
musculus]
Length = 219
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|156848022|ref|XP_001646894.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
gi|156117575|gb|EDO19036.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 101/143 (70%), Gaps = 2/143 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +T Q G+P+T +VAA++ + L Y NK+ L G+IV G+D+
Sbjct: 68 AADTQAVADIVQYHLEMYTAQYGEPST-EVAASIFKTLCYENKDNLTAGIIVAGYDEANK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ QP+AI GSGS+++YG+ D+ +KE MTKEE + + ++S AI DG
Sbjct: 127 GQVYSIPLGGSVHRQPYAIAGSGSTFIYGYCDKNFKEDMTKEETIEFMKHSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + +G R FYP
Sbjct: 187 SSGGVIRMVVLTKDGAERLIFYP 209
>gi|156617988|gb|ABU87864.1| proteasome subunit beta type 9 protein [Clupea pallasii]
Length = 217
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+++LG+ + V+ AA LV+ +SY K L +IV GWD+ +
Sbjct: 67 AADAQTIAEIVNYQLDVHSVELGEDSLVRSAATLVKNISYKYKEELSAHLIVAGWDRKKK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y V + G + QPFA+GGSGSSY+YGF D +++ M++ E ++ VV A++LA+ RDG
Sbjct: 127 GQVY-VTMSGLLSRQPFAVGGSGSSYVYGFVDAEYRKDMSRRECQEFVVNALTLAMGRDG 185
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV VTI+ G K G+ LP + ++
Sbjct: 186 SSGGVAYLVTIDETGAEEKCILGNDLPKFFDQ 217
>gi|299747960|ref|XP_001837366.2| proteasome subunit beta type 6 [Coprinopsis cinerea okayama7#130]
gi|298407753|gb|EAU84282.2| proteasome subunit beta type 6 [Coprinopsis cinerea okayama7#130]
Length = 215
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V + L T G+ +V AA + + + Y+NK+ L G+I
Sbjct: 32 IYCCRS-GSAADTQAVADVVHHHLQLITQMNGEAPSVHTAAQVFQKICYDNKDALSAGII 90
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D ++EG ++E + V
Sbjct: 91 VAGWDKEVGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYREGWGRDETVEFVKNT 150
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
++LA++RDG+SGGV+R I V R F PG+ LP + E
Sbjct: 151 LALAMSRDGSSGGVIRMCVITENNVERLFIPGNELPRFWE 190
>gi|156844743|ref|XP_001645433.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
70294]
gi|156116095|gb|EDO17575.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 101/143 (70%), Gaps = 2/143 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +T Q G+P+T +VAA++ + L Y NK+ L G+IV G+D+
Sbjct: 68 AADTQAVADIVQYHLEMYTAQYGEPST-EVAASIFKTLCYENKDNLTAGIIVAGYDEANK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ QP+AI GSGS+++YG+ D+ +KE MTKEE + + ++S AI DG
Sbjct: 127 GQVYSIPLGGSVHRQPYAIAGSGSAFIYGYCDKNFKEDMTKEETIEFMKHSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + +G R FYP
Sbjct: 187 SSGGVIRMVVLTKDGAERLIFYP 209
>gi|509035|dbj|BAA40680.1| LMP-2 polypeptide [Mus musculus]
gi|984355|gb|AAA75307.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|2467347|dbj|BAA22575.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
castaneus]
gi|2467353|dbj|BAA22578.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
molossinus]
gi|30027662|gb|AAP13903.1| proteasome subunit [Mus sp.]
gi|74152640|dbj|BAE42601.1| unnamed protein product [Mus musculus]
Length = 219
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|50311275|ref|XP_455662.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644798|emb|CAG98370.1| KLLA0F12936p [Kluyveromyces lactis]
Length = 215
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 101/143 (70%), Gaps = 2/143 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +T Q G+P T KVAA++ + L Y NK+ L G+IV G+D+
Sbjct: 68 AADTQAVADIVQYHLELYTSQYGEP-TTKVAASIFKTLCYENKDHLTAGIIVAGYDEKNK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q ++I GSGS+++YG+ D+ +KE MTKEE + V ++S AI DG
Sbjct: 127 GEVYSIPLGGSVHKQSYSIAGSGSAFIYGYCDKNYKEDMTKEETIEFVKHSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRKF-YP 153
+SGGV+R V + +EGV R YP
Sbjct: 187 SSGGVIRMVVLTAEGVERLIVYP 209
>gi|145499554|ref|XP_001435762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402897|emb|CAK68365.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 102/158 (64%), Gaps = 1/158 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I CLR AAD+Q ++ +VRY++ H +LG+ V AANL R Y K+ + +
Sbjct: 57 RIFCLRSG-AAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMSASI 115
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD Y+G +I+ +PLGG++IEQ ++IGGSGS++++GF D +KE MT +EA V
Sbjct: 116 IVAGWDPYKGPQIFTLPLGGSVIEQKWSIGGSGSTFIWGFCDSNYKENMTHQEARAFVSH 175
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
AV+ A+ RDG+SGG++R + + + + R+F +P
Sbjct: 176 AVAHAMFRDGSSGGIIRLLNVTKDKIEREFIDYKDVPF 213
>gi|242208948|ref|XP_002470323.1| predicted protein [Postia placenta Mad-698-R]
gi|220730630|gb|EED84484.1| predicted protein [Postia placenta Mad-698-R]
Length = 220
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y ++ G+ V AN+ + L Y NK+ L G+I
Sbjct: 38 IYCCRS-GSAADTQAIADIVHYHFQVYSQTHGEAPPVHTVANVFQKLCYENKDALSAGII 96
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK G +Y +PLGG + QP+AIGGSGS+Y+YG+ D +++G +++ V
Sbjct: 97 VAGWDKEVGPSVYNIPLGGGLFRQPWAIGGSGSTYVYGYCDATYQDGWDRDQTINFVRNT 156
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
++LA++RDG+SGGV+R I +GV R F PG+ LP + E E
Sbjct: 157 LALAMSRDGSSGGVIRMCVITEDGVERLFVPGNELPKFWEGKE 199
>gi|406698063|gb|EKD01309.1| 20S proteasome beta-type subunit, Pre3p [Trichosporon asahii var.
asahii CBS 8904]
Length = 234
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V + +T G+ V A L L Y NK+ L G+I
Sbjct: 60 IYCCRS-GSAADTQAVADIVHHHAQLYTQIYGEAPPVATIAALFEKLCYENKDQLSAGII 118
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
VGGWDK GG +Y +PLGG +QP+AIGGSGS+Y+YG+ D ++EG +E+ + V
Sbjct: 119 VGGWDKENGGSVYNIPLGGGTFKQPWAIGGSGSTYVYGYCDATYREGWNEEQTIEFVKNT 178
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
++LA++RDG+SGG +R + + V R F PG+ LP + E E
Sbjct: 179 LALAMSRDGSSGGCIRMCVLTKDKVERIFIPGNELPRFWEGKE 221
>gi|330914049|ref|XP_003296474.1| hypothetical protein PTT_06586 [Pyrenophora teres f. teres 0-1]
gi|311331358|gb|EFQ95438.1| hypothetical protein PTT_06586 [Pyrenophora teres f. teres 0-1]
Length = 227
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + +P T + AA + + L Y+NK+ L G+I+
Sbjct: 69 CCRS-GSAADTQAVADIVHYHLGMYGTTNDEPPTTQTAAAIFQELCYSNKDQLSAGLIIA 127
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM++EE + V A+S
Sbjct: 128 GWDHRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMSEEEGIKFVKGALS 187
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + +G R Y
Sbjct: 188 EAIKWDGSSGGVIRMVVLTGKGAQRHLY 215
>gi|47216874|emb|CAG11681.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 92/151 (60%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H+IQ+ P V AA++++ L Y NK LQ G I GWD +G
Sbjct: 30 ADAQAVTKAAKFQLSFHSIQMETPPLVISAASVLKELCYQNKEELQAGFITAGWDSRDGP 89
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y V LGG ++ QP IGGSGS+++YG+ D +K M++EE Q A++LA+ RD
Sbjct: 90 QVYVVSLGGMLLRQPVTIGGSGSTFIYGYVDAKYKPNMSREECLQFATNALALAMGRDNV 149
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I GV PGD LP +H+E
Sbjct: 150 SGGVANLVVITEAGVEHVVVPGDKLPTFHDE 180
>gi|346319105|gb|EGX88707.1| proteasome component PRE3 precursor [Cordyceps militaris CM01]
Length = 236
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L +Q G+P + AA++ + L Y NK+ L G+I+
Sbjct: 57 CCRS-GSAADTQAVADIVQYQLGMFAMQSGKPPITQTAASIFQELCYANKDRLSAGLIIA 115
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + +A V A+
Sbjct: 116 GWDERFGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEEADAVSFVKGALR 175
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY-PGDTLPLWHEELEPQNSLLDMMNVASPE 180
AI DG+SGGV+R V + ++G R Y P + E + L D M V E
Sbjct: 176 EAIKWDGSSGGVIRMVVLTAKGADRHLYLPDSDYAVLAYGQEAYSMLSDAMGVEKGE 232
>gi|212536802|ref|XP_002148557.1| proteasome component Pre3, putative [Talaromyces marneffei ATCC
18224]
gi|210070956|gb|EEA25046.1| proteasome component Pre3, putative [Talaromyces marneffei ATCC
18224]
Length = 231
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I +P + + AA L + L Y+NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVSYHLNMYGIVNDEPPSTQTAAALFQELCYDNKDQLSAGIIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGMT+EE V A+
Sbjct: 131 GYDRRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMTEEEGVNFVKSALG 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 191 EAIKWDGSSGGVIRMVVLTAKGAIRHLY 218
>gi|336259304|ref|XP_003344454.1| hypothetical protein SMAC_08650 [Sordaria macrospora k-hell]
gi|380087549|emb|CCC05335.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 197
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + + +P T + AA + + ++Y+NK+ L G+I+
Sbjct: 40 CCRS-GSAADTQAVADIVQYQLGLYEMVNARPPTTQTAAAIFQEIAYSNKDRLTAGLIIA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YGF D WKEGM + EA V +A+
Sbjct: 99 GWDARHGGQVYNIPLGGSLHKQSYAIGGSGSTYIYGFCDANWKEGMEEAEAVAFVKEALK 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + +G R Y DT
Sbjct: 159 EAIKWDGSSGGVIRMVVLTEKGADRHLYLPDT 190
>gi|226287754|gb|EEH43267.1| proteasome component PRE3 [Paracoccidioides brasiliensis Pb18]
Length = 232
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 99/148 (66%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + I +P T + AA L + L Y+NK+ L+ G+I+
Sbjct: 74 CCRS-GSAADTQAVADIVHYHLGMYGIVNKEPPTTQTAAALFQELCYDNKDMLRAGIIIA 132
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 133 GYDQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQ 192
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 193 EAIKWDGSSGGVIRMVVLTAKGAVRHLY 220
>gi|17380241|sp|O35523.1|PSB9_MUSPL RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467357|dbj|BAA22580.1| low molecular mass polypeptide complex subunit 2 [Mus platythrix]
Length = 219
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITVAGVDHRVILGDELPKFYDE 219
>gi|225684870|gb|EEH23154.1| V Chain V [Paracoccidioides brasiliensis Pb03]
Length = 198
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + I +P T + AA L + L Y+NK+ L+ G+I+
Sbjct: 40 CCRS-GSAADTQAVADIVHYHLGMYGIVNKEPPTTQTAAALFQELCYDNKDMLRAGIIIA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 99 GYDQRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQ 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + ++G R Y D
Sbjct: 159 EAIKWDGSSGGVIRMVVLTAKGAVRHLYLPD 189
>gi|449295314|gb|EMC91336.1| hypothetical protein BAUCODRAFT_39505 [Baudoinia compniacensis UAMH
10762]
Length = 232
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + I +P T + AA L + L Y+NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVQYHLGMYGIVNDEPPTTQTAAALFQELCYDNKDQLSAGIIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+ E + V A+
Sbjct: 131 GWDHRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMTEAEGIKFVKGALQ 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 191 EAIKWDGSSGGVIRMVVLTAQGAIRHLY 218
>gi|383850395|ref|XP_003700781.1| PREDICTED: proteasome subunit beta type-6-like isoform 2 [Megachile
rotundata]
Length = 212
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 100/151 (66%), Gaps = 3/151 (1%)
Query: 13 ADSQT-VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AD T ++DY+ + + +G V+ AAN+ R L YN ++ L G++V GWD +G
Sbjct: 63 ADKLTKITDYI--YCCRSGSAVGMEPLVETAANVFRELCYNYRDSLMAGILVAGWDNRKG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG + QP +IGGSGS+Y+YG+ D +K M++EE E+LV ++LA+ARDG
Sbjct: 121 GQVYSIPLGGMCVRQPISIGGSGSTYVYGYMDSQYKPNMSREECEKLVENTLALAMARDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
+SGGV+R I +G+ RK G+ LP ++E
Sbjct: 181 SSGGVIRMGVITEKGIERKVILGNNLPRFYE 211
>gi|167379227|ref|XP_001735049.1| proteasome subunit beta type-6 precursor [Entamoeba dispar SAW760]
gi|165903089|gb|EDR28742.1| proteasome subunit beta type-6 precursor, putative [Entamoeba
dispar SAW760]
Length = 213
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 6/157 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
+A S+T++DYVR+ L +T Q + TV AA R + Y NK+FL + +I GG+D G
Sbjct: 63 SAHSETIADYVRHSLRMYTAQTREEPTVLAAATSTRNIIYGNKSFLSSSVICGGYDSVNG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G + + +GGSGS+Y++G+ D +K+ MT EEA+Q ++ AVSLAI RDG
Sbjct: 123 ATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKDMTFEEAKQFIITAVSLAIYRDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
+SGG++ TV I SEGV +F GD +P+ PQN
Sbjct: 183 SSGGIIHTVNITSEGVQSEFITGDKVPV------PQN 213
>gi|440299634|gb|ELP92186.1| proteasome subunit beta type-6 precursor, putative [Entamoeba
invadens IP1]
Length = 213
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 97/147 (65%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AA S+T+ DY R+ L +T Q G+ V+ AA + L Y+NK+FL I+GG+D +G
Sbjct: 63 AAHSETIVDYTRHSLRMYTSQTGEEPCVQAAATSYKNLVYSNKSFLSCSGIIGGYDDIKG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G IY V G I+ +GGSGS+Y+YGF D +++ MT ++A+Q V+ A+SLAIARDG
Sbjct: 123 GSIYRVLQSGAIVPGEMCLGGSGSTYIYGFCDANFRKNMTLQQAKQFVITAISLAIARDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGG + TV IN E V+ ++ GD +P
Sbjct: 183 SSGGNIHTVVINKESVTSEWITGDKVP 209
>gi|255954391|ref|XP_002567948.1| Pc21g09090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589659|emb|CAP95806.1| Pc21g09090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 199
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + + + T +VAA+L + L Y NK+ L G+I+
Sbjct: 40 CCRS-GSAADTQAVADIVSYHLNMYGVTNAEAPTTQVAASLFQELCYENKDALSAGIILA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG+++ +PLGG++ +QPFAIGGSGS+Y+YG+ D W+E MT+EE V A+
Sbjct: 99 GWDARHGGQVFSIPLGGSLHKQPFAIGGSGSTYIYGYTDAHWREQMTEEEGIDFVRSALQ 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + G R Y D
Sbjct: 159 EAIKWDGSSGGVIRLVVLTKAGAVRHLYLPD 189
>gi|296197836|ref|XP_002746462.1| PREDICTED: proteasome subunit beta type-9 isoform 1 [Callithrix
jacchus]
Length = 219
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
Query: 24 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTI 83
Y L H I+L +P V AAN+VR +SY + L ++V GWD+ EGG++YG LGG +
Sbjct: 81 YQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLLVAGWDQREGGQVYGT-LGGML 139
Query: 84 IEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 143
QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RDG+SGGV+ VTI
Sbjct: 140 TRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTIT 199
Query: 144 SEGVSRKFYPGDTLPLWHEE 163
+ GV + G+ LP +++E
Sbjct: 200 AAGVDHRVISGNKLPKFYDE 219
>gi|451848714|gb|EMD62019.1| hypothetical protein COCSADRAFT_95820 [Cochliobolus sativus ND90Pr]
Length = 229
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 98/151 (64%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + +P T++ AA L + L Y+NK+ L G+I+
Sbjct: 71 CCRS-GSAADTQAVADIVQYHLGMYGTTNDEPPTIQTAAALFQELCYSNKDQLSAGLIIA 129
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+E M++EE + V A++
Sbjct: 130 GWDHRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWRENMSEEEGIKFVKGALA 189
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + +G R Y D
Sbjct: 190 EAIKWDGSSGGVIRMVVLTGKGAQRHLYLPD 220
>gi|453081852|gb|EMF09900.1| proteasome component Pre3 [Mycosphaerella populorum SO2202]
Length = 231
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + IQ T + AA L + L Y NK+ L G+I+
Sbjct: 71 CCRS-GSAADTQAVADIVQYHLSTYGIQNDDAPTTQTAAALFQELCYENKDMLSAGIIIA 129
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q FAI GSGS+Y+YG+ D WKEGMT+EE V ++
Sbjct: 130 GWDPRHGGQVYQIPLGGSLHKQAFAIAGSGSTYIYGYTDANWKEGMTEEEGIAFVKGSLK 189
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + ++G R Y D
Sbjct: 190 EAIKWDGSSGGVIRMVVLTAKGAVRHLYLPD 220
>gi|358379512|gb|EHK17192.1| hypothetical protein TRIVIDRAFT_232075 [Trichoderma virens Gv29-8]
Length = 229
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLFAMTSGRPPMTQTAASIFQEICYANKDMLSAGLIIAGWDERFG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM ++EA V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEEDEAVNFVKGALREAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y DT
Sbjct: 198 SSGGVIRMVVLTKKGADRHLYLPDT 222
>gi|380491934|emb|CCF34978.1| proteasome component PRE3 [Colletotrichum higginsianum]
Length = 228
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 99/144 (68%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + ++ G+P + AA + + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLYAMRNGKPPMTQTAAAIFQEVCYANKDRLTAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D+ WKEGM ++EA + V ++ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDEHWKEGMEEKEAVEFVKGSLKEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGV+R V + ++G R Y D
Sbjct: 198 SSGGVIRMVVLTAKGAQRHLYLPD 221
>gi|67470012|ref|XP_650977.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467649|gb|EAL45591.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407039729|gb|EKE39789.1| proteasome subunit beta type 6 precursor, putative [Entamoeba
nuttalli P19]
gi|449704829|gb|EMD44998.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 213
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 6/157 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AA S+T+ DYV++ L +T Q G+ TV AA ++ + Y NK+FL + ++ GG+D G
Sbjct: 63 AAHSETIGDYVKHALRMYTAQTGEEPTVLAAATSIKNIIYGNKSFLSSSVVCGGYDPVNG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G + + +GGSGS+Y++G+ D +K+ MT EEA+Q +V AVSLAI RDG
Sbjct: 123 ATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKNMTFEEAKQFIVTAVSLAIYRDG 182
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
+SGG++ TV I +EGV +F GD +P+ PQN
Sbjct: 183 SSGGIIHTVNITAEGVQSEFITGDKVPV------PQN 213
>gi|67526597|ref|XP_661360.1| hypothetical protein AN3756.2 [Aspergillus nidulans FGSC A4]
gi|40740774|gb|EAA59964.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481696|tpe|CBF75458.1| TPA: putative proteasome core beta subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 233
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ ++I +P + +VAA L + L Y NK+ L G+I+
Sbjct: 74 CCRS-GSAADTQAVADIVSYHLNMYSIVNNEPPSTQVAAALFQELCYENKDMLSAGIIIA 132
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q ++IGGSGS+Y+YG+ D WKE MT+EE + V A+
Sbjct: 133 GYDPRHGGQVYSIPLGGSLHKQAYSIGGSGSTYIYGYCDANWKENMTEEEGVEFVRGALR 192
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + G R Y D
Sbjct: 193 EAIKWDGSSGGVIRMVVLTKNGAQRHLYLPD 223
>gi|389622405|ref|XP_003708856.1| proteasome component PRE3 [Magnaporthe oryzae 70-15]
gi|351648385|gb|EHA56244.1| proteasome component PRE3 [Magnaporthe oryzae 70-15]
Length = 228
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + G+P T + AA + + + Y+NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVQYQLGLFHMTNGKPPTTQTAAAIFQEICYSNKDRLSAGLIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM + +A Q V A++
Sbjct: 131 GWDERHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMEEADAVQFVKGALA 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + ++G R Y D
Sbjct: 191 EAIKWDGSSGGVIRMVVLTAKGADRHLYLPD 221
>gi|17380239|sp|O35521.1|PSB9_MUSDU RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467349|dbj|BAA22576.1| low molecular mass polypeptide complex subunit 2 [Mus terricolor]
Length = 219
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP ++ E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYGE 219
>gi|115395784|ref|XP_001213531.1| proteasome component PRE3 precursor [Aspergillus terreus NIH2624]
gi|114193100|gb|EAU34800.1| proteasome component PRE3 precursor [Aspergillus terreus NIH2624]
Length = 251
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I + + +VAA+L + L Y NK+ L G+I+
Sbjct: 92 CCRS-GSAADTQAVADIVSYHLNMYAIVNNEAPSTQVAASLFQELCYENKDMLSAGIIIA 150
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q ++IGGSGS+Y+YG+ D W+E MT+EE Q V A+
Sbjct: 151 GYDPRHGGQVYSIPLGGSLHKQAYSIGGSGSTYIYGYCDANWRENMTEEEGIQFVRSALQ 210
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + ++G R Y DT
Sbjct: 211 EAIKWDGSSGGVIRMVVLTAKGAVRHLYLPDT 242
>gi|392576348|gb|EIW69479.1| hypothetical protein TREMEDRAFT_30350 [Tremella mesenterica DSM
1558]
Length = 209
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 94/154 (61%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V ++ G P V ++ L Y NK+ L G+IV GWD G
Sbjct: 46 AADTQAVADIVHQHCQIYSSLYGTPPPVATVTSMFEKLCYTNKDQLSAGIIVAGWDAEAG 105
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G +Y +PLGG + +QP+AIGGSGS+Y+YG+ D +++G +EE Q V ++LA++RDG
Sbjct: 106 GSVYNIPLGGGMFQQPWAIGGSGSTYVYGYCDATYQDGWNEEETVQFVKNTLALAMSRDG 165
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+SGG +R I + V R F PG+ LP + E E
Sbjct: 166 SSGGCIRMCVITKDKVQRHFIPGNELPRFWEGKE 199
>gi|440473524|gb|ELQ42315.1| proteasome component PRE3 [Magnaporthe oryzae Y34]
gi|440489744|gb|ELQ69371.1| proteasome component PRE3 [Magnaporthe oryzae P131]
Length = 211
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 98/144 (68%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T + AA + + + Y+NK+ L G+I+ GWD+ G
Sbjct: 61 AADTQAVADIVQYQLGLFHMTNGKPPTTQTAAAIFQEICYSNKDRLSAGLIIAGWDERHG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM + +A Q V A++ AI DG
Sbjct: 121 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMEEADAVQFVKGALAEAIKWDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGV+R V + ++G R Y D
Sbjct: 181 SSGGVIRMVVLTAKGADRHLYLPD 204
>gi|46122507|ref|XP_385807.1| hypothetical protein FG05631.1 [Gibberella zeae PH-1]
Length = 212
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 61 AADTQAVADIVQYQLGLFAMTNGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM K++A V A+ AI DG
Sbjct: 121 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALREAIKWDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + EG R Y DT
Sbjct: 181 SSGGVIRMVVLTKEGADRHLYLPDT 205
>gi|346977948|gb|EGY21400.1| proteasome component PRE3 [Verticillium dahliae VdLs.17]
Length = 229
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 98/145 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + ++ G+P + AA++ + + Y+NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGMYAMRNGKPPMTQTAASIFQEICYSNKDRLSAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+E M ++EA V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWQESMEEQEAVAFVKGALREAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + + G R Y DT
Sbjct: 198 SSGGVIRMVVLTASGADRHLYLPDT 222
>gi|452980341|gb|EME80102.1| hypothetical protein MYCFIDRAFT_189770 [Pseudocercospora fijiensis
CIRAD86]
Length = 231
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + I + T + AA + + L Y NK+ L G+I+
Sbjct: 71 CCRS-GSAADTQAVADIVQYHLGMYGITNDEAPTTQTAAAIFQELCYENKDALSAGIIIA 129
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V A+
Sbjct: 130 GWDHRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDAHWREGMTEEEGIKFVKGALQ 189
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 190 EAIKWDGSSGGVIRMVVLTAKGAIRHLY 217
>gi|402076365|gb|EJT71788.1| proteasome component PRE3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 229
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 97/144 (67%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T + AA + + + Y+NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLFHMMNGKPPTTQTAAAIFQEMCYSNKDRLSAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM ++EA V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMEEKEAVAFVKGALGEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGV+R V + ++G R Y D
Sbjct: 198 SSGGVIRMVVLTAQGADRHLYLPD 221
>gi|302902756|ref|XP_003048711.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729645|gb|EEU42998.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 97/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y+NK+ L G+I+ GWD+ G
Sbjct: 61 AADTQAVADIVQYQLGLFAMMNGKPPMTQTAASIFQEICYSNKDRLSAGLIIAGWDERFG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM K++A V A+ AI DG
Sbjct: 121 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALREAIKWDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y DT
Sbjct: 181 SSGGVIRMVVLTKDGADRHLYLPDT 205
>gi|408394398|gb|EKJ73606.1| hypothetical protein FPSE_06224 [Fusarium pseudograminearum CS3096]
Length = 229
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLFAMTNGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM K++A V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALREAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + EG R Y DT
Sbjct: 198 SSGGVIRMVVLTKEGADRHLYLPDT 222
>gi|17380240|sp|O35522.1|PSB9_MUSMB RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467351|dbj|BAA22577.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
bactrianus]
Length = 219
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF I GSGSSY+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|254571735|ref|XP_002492977.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Komagataella pastoris
GS115]
gi|238032775|emb|CAY70798.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Komagataella pastoris
GS115]
gi|328353009|emb|CCA39407.1| 20S proteasome subunit beta 1 [Komagataella pastoris CBS 7435]
Length = 216
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D V+Y L + Q G P T K+AA+L + L YNNK+ L G+I G+D E
Sbjct: 67 SAADTQAVADIVKYHLELYEAQHGAPPTTKIAASLFQELCYNNKDALTAGIICAGYDDKE 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G IY +P+GG+I +Q +AI GSGS+++YG+ ++ +K MT++E + + ++S AI D
Sbjct: 127 KGAIYSIPIGGSIHKQEYAIAGSGSTFIYGYCNKNFKSNMTRDETVEFIKTSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSR-KFYPGD 155
G+SGGV+R V + + GV R FYP D
Sbjct: 187 GSSGGVIRMVVLTASGVERLVFYPED 212
>gi|398395561|ref|XP_003851239.1| proteasome core particle subunit beta 1 [Zymoseptoria tritici
IPO323]
gi|339471118|gb|EGP86215.1| hypothetical protein MYCGRDRAFT_73771 [Zymoseptoria tritici IPO323]
Length = 231
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + I +P T + AA + + L Y+NK+ L G+I+
Sbjct: 71 CCRS-GSAADTQAVADIVQYHLGMYGITNDEPPTTQTAAAIFQELCYDNKDSLSAGIIIA 129
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + E V A+
Sbjct: 130 GWDHRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWKEGMDEAEGISFVKGALQ 189
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 190 EAIKWDGSSGGVIRMVVLTAKGAVRHLY 217
>gi|340515889|gb|EGR46140.1| predicted protein [Trichoderma reesei QM6a]
Length = 212
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 61 AADTQAVADIVQYQLGLFAMHSGKPPMTQTAASIFQEICYANKDQLSAGLIIAGWDERFG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM ++EA V A+ AI DG
Sbjct: 121 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEEDEAVAFVKGALREAIKWDG 180
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y DT
Sbjct: 181 SSGGVIRMVVLTKKGADRHLYLPDT 205
>gi|451998532|gb|EMD90996.1| hypothetical protein COCHEDRAFT_1156343 [Cochliobolus
heterostrophus C5]
Length = 224
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + +P T + AA L + L Y+NK+ L G+I+
Sbjct: 66 CCRS-GSAADTQAVADIVQYHLGMYGTTNDEPPTTQTAAALFQELCYSNKDQLSAGLIIA 124
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+E M++EE + V A++
Sbjct: 125 GWDHRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWRENMSEEEGIKFVKGALA 184
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + +G R Y D
Sbjct: 185 EAIKWDGSSGGVIRMVVLTGKGAQRHLYLPD 215
>gi|425772582|gb|EKV10982.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
gi|425773391|gb|EKV11747.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
Length = 233
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + + + T +VAA+L + L Y NK+ L G+I+
Sbjct: 74 CCRS-GSAADTQAVADIVSYHLNMYGVTNAEAPTTQVAASLFQELCYENKDALSAGIILA 132
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q FAIGGSGS+Y+YG+ D W+E MT+EE V A+
Sbjct: 133 GWDARHGGQVYSIPLGGSLHKQSFAIGGSGSTYIYGYTDAHWREQMTEEEGIDFVRSALQ 192
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + G R Y D
Sbjct: 193 EAIKWDGSSGGVIRLVVLTKAGAVRHLYLPD 223
>gi|358398283|gb|EHK47641.1| hypothetical protein TRIATDRAFT_298679 [Trichoderma atroviride IMI
206040]
Length = 229
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +Q G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLFAMQSGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + EA V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMEEAEAVAFVKGALREAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y D+
Sbjct: 198 SSGGVIRMVVLTKKGADRHLYLPDS 222
>gi|327357407|gb|EGE86264.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 231
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + + +P T + AA L + L Y+NK+ L G+I+
Sbjct: 73 CCRS-GSAADTQAVADIVSYHLGMYGVVNQEPPTTQTAAALFQELCYDNKDMLSAGIIIA 131
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 132 GYDPRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDAKWREGMTEEEGIEFVKTSLQ 191
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 192 EAIKWDGSSGGVIRMVVLTAKGAVRHLY 219
>gi|342873605|gb|EGU75769.1| hypothetical protein FOXB_13788 [Fusarium oxysporum Fo5176]
Length = 234
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 96/145 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P + AA++ + + Y NK+ L G+I+ GWD+ G
Sbjct: 83 AADTQAVADIVQYQLGLFAMTNGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFG 142
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM K++A V A+ AI DG
Sbjct: 143 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALREAIKWDG 202
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
+SGGV+R V + +G R Y DT
Sbjct: 203 SSGGVIRMVVLTKDGADRHLYLPDT 227
>gi|444318555|ref|XP_004179935.1| hypothetical protein TBLA_0C06200 [Tetrapisispora blattae CBS 6284]
gi|387512976|emb|CCH60416.1| hypothetical protein TBLA_0C06200 [Tetrapisispora blattae CBS 6284]
Length = 216
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD-KYE 70
AAD+Q V+D V+Y L +T Q G P+T + AA++ + L Y NK+FL G+IV G+D K E
Sbjct: 68 AADTQAVADIVQYHLEVYTSQYGIPST-RTAASVFQSLCYENKDFLSAGIIVAGFDDKSE 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG+I +QP+AI GSGS+++YG+ D+ +K MTK+E + + ++S AI D
Sbjct: 127 KGEVYSIPLGGSIHKQPYAIAGSGSAFIYGYCDKNYKPDMTKDETVEFMKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSRK-FYPGD 155
G+SGGV+R V + GV R FYP D
Sbjct: 187 GSSGGVIRLVVLTKSGVERLIFYPED 212
>gi|18859275|ref|NP_571466.1| proteasome subunit beta type-9 [Danio rerio]
gi|5833461|gb|AAD53519.1|AF155579_1 proteasome subunit beta 9A [Danio rerio]
gi|29561856|emb|CAD87789.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
gi|50416819|gb|AAH78384.1| Proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
gi|94732367|emb|CAK04958.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
Length = 218
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+QT+++ V Y L H+I++ V AA LV+ +SY K L +IV GWDK
Sbjct: 67 SAADAQTIAEIVNYQLDVHSIEVEDDPLVCSAATLVKNISYKYKEELSAHLIVAGWDKKG 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y L G + +QPFAIGGSGS Y+ GF D +K+ MTK E ++ VV A++LA+ RD
Sbjct: 127 GGQVYAT-LSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLAMGRD 185
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV VTI+ +G K G+ LP + +E
Sbjct: 186 GSSGGVAYVVTIDKDGTEEKCVLGNELPKFFDE 218
>gi|428170137|gb|EKX39065.1| 20S proteasome subunit beta type 6 [Guillardia theta CCMP2712]
Length = 221
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 104/148 (70%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D +R +L H++++G+ V AAN++ + Y NKN+L GMI GWD+
Sbjct: 66 SAADTQAVADMMRMYLGMHSLEIGKDPEVPTAANILNQVCYENKNYLMAGMICAGWDERN 125
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG +Y +PLGG + + + IGGSGS Y+YG+ D +++GM+K EA++ V A+SLAI RD
Sbjct: 126 GGVVYSIPLGGGLFRESYTIGGSGSGYIYGYCDANFRKGMSKHEAQEFVKNAISLAIWRD 185
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
G+SGGV+RTVTI +GV R+ GD LP
Sbjct: 186 GSSGGVIRTVTITKDGVEREMVLGDKLP 213
>gi|407921468|gb|EKG14611.1| Peptidase T1A proteasome beta-subunit [Macrophomina phaseolina MS6]
Length = 227
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 93/141 (65%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L + IQ + T + AA L + L Y+NK+ L GMI+ G+D G
Sbjct: 75 AADTQAVADIVHYHLGMYGIQNNERPTTQTAAALFQELCYDNKDMLSAGMIIAGYDPRHG 134
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM+++E V A+ AI DG
Sbjct: 135 GQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWREGMSEQEGVDFVKGALREAIKWDG 194
Query: 132 ASGGVVRTVTINSEGVSRKFY 152
+SGGV+R V + + G R Y
Sbjct: 195 SSGGVIRMVVLTAAGAQRHLY 215
>gi|255725804|ref|XP_002547828.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
gi|240133752|gb|EER33307.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
Length = 212
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 100/143 (69%), Gaps = 3/143 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK- 68
AAD+Q ++D V+Y+L ++ QL G+ K+AAN+ + L YNNK+ L G+IV G+DK
Sbjct: 68 AADTQAIADIVKYYLQLYSSQLPNGEQPETKIAANVFQELCYNNKDNLTAGIIVAGYDKK 127
Query: 69 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
+ G ++ VP+GG+I E +AI GSGS+Y+YG D+ +K GM+KE+A + V++A++ A
Sbjct: 128 TDSGSVFSVPIGGSIHESEYAIVGSGSTYIYGLCDKNFKSGMSKEDAVEFVIQALTEAKK 187
Query: 129 RDGASGGVVRTVTINSEGVSRKF 151
DG+SGGV R + SEGV RKF
Sbjct: 188 FDGSSGGVTRMIIATSEGVERKF 210
>gi|239614938|gb|EEQ91925.1| proteasome component [Ajellomyces dermatitidis ER-3]
Length = 198
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + + +P T + AA L + L Y+NK+ L G+I+
Sbjct: 40 CCRS-GSAADTQAVADIVSYHLGMYGVVNQEPPTTQTAAALFQELCYDNKDMLSAGIIIA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 99 GYDPRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDAKWREGMTEEEGIEFVKTSLQ 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 159 EAIKWDGSSGGVIRMVVLTAKGAVRHLY 186
>gi|310800635|gb|EFQ35528.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 228
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 98/144 (68%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + ++ G+P + AA + + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGMYAMRNGKPPMTQTAAAIFQEVCYANKDRLTAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D+ W+EGM +++A V ++ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDEHWREGMEEQDAVDFVKGSLKEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGV+R V + ++G R Y D
Sbjct: 198 SSGGVIRMVVLTAKGAQRHLYLPD 221
>gi|74220487|dbj|BAE31463.1| unnamed protein product [Mus musculus]
Length = 219
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQCE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG +GG +I QPF IG SGSSY+YG+ D A+K GMT E+ + A++LA+ RD
Sbjct: 128 GGQVYGT-MGGMLIRQPFTIGDSGSSYIYGYVDAAYKPGMTPEDCRRFTTDAITLAMNRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + GD LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGDELPKFYDE 219
>gi|182892146|gb|AAI65916.1| Psmb9a protein [Danio rerio]
Length = 218
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
Query: 8 LLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
L AAD+QT+++ V Y L H+I++ V AA LV+ +SY K L +IV GWD
Sbjct: 64 LTGSAADAQTIAEIVNYQLDVHSIEVEDDPLVCSAATLVKNISYKYKEELSAHLIVAGWD 123
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K GG++Y L G + +QPFAIGGSGS Y+ GF D +K+ MTK E ++ +V A++LA+
Sbjct: 124 KKGGGQVYAT-LSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFIVNALTLAM 182
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
RDG+SGGV VTI+ +G K G+ LP + +E
Sbjct: 183 GRDGSSGGVAYVVTIDKDGTEEKCVLGNELPKFFDE 218
>gi|396458032|ref|XP_003833629.1| similar to proteasome subunit beta type-6 precursor [Leptosphaeria
maculans JN3]
gi|312210177|emb|CBX90264.1| similar to proteasome subunit beta type-6 precursor [Leptosphaeria
maculans JN3]
Length = 228
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + +P T + AA + + L Y+NK+ L G+I+
Sbjct: 70 CCRS-GSAADTQAVADIVQYHLGMYGATNDEPPTTQTAAAIFQELCYSNKDQLSAGLIIA 128
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+E M++EE + V A++
Sbjct: 129 GWDHRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWRENMSEEEGIKFVKGALA 188
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + +G R Y D
Sbjct: 189 EAIKWDGSSGGVIRMVVLTGQGAQRHLYLPD 219
>gi|261188327|ref|XP_002620579.1| proteasome component [Ajellomyces dermatitidis SLH14081]
gi|239593258|gb|EEQ75839.1| proteasome component [Ajellomyces dermatitidis SLH14081]
Length = 198
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q ++D V Y L + + +P T + AA L + L Y+NK+ L G+I+
Sbjct: 40 CCRS-GSAADTQAIADIVSYHLGMYGVVNQEPPTTQTAAALFQELCYDNKDMLSAGIIIA 98
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 99 GYDPRHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDAKWREGMTEEEGIEFVKTSLQ 158
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + ++G R Y
Sbjct: 159 EAIKWDGSSGGVIRMVVLTAKGAVRHLY 186
>gi|255711280|ref|XP_002551923.1| KLTH0B03102p [Lachancea thermotolerans]
gi|238933301|emb|CAR21485.1| KLTH0B03102p [Lachancea thermotolerans CBS 6340]
Length = 215
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 101/145 (69%), Gaps = 2/145 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+++L +T Q G+P+T K AA++ + L Y NK+ L G+IV G+D+
Sbjct: 68 AADTQAVADIVQHYLELYTAQFGEPST-KTAASIFKTLCYENKDNLTAGIIVAGYDEKNK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AI GSGS+++YG+ D+ +KE M+K+E + ++S AI DG
Sbjct: 127 GEVYSIPLGGSVHKQKYAIAGSGSTFIYGYCDKNYKENMSKDETVSFMKNSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRK-FYPGD 155
+SGGV+R V + +G R FYP D
Sbjct: 187 SSGGVIRMVVLTKDGAERLIFYPED 211
>gi|154308434|ref|XP_001553553.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347826568|emb|CCD42265.1| similar to proteasome subunit beta type-6 precursor [Botryotinia
fuckeliana]
Length = 229
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L + G+ T + AA + + L Y+NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVHYQLGMYGALNGKTPTTQTAAAMFQELCYDNKDQLSAGLIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + +A V A+
Sbjct: 131 GWDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWKEGMEEADAVDFVKGALQ 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
AI DG+SGGV+R V + ++G R Y DT
Sbjct: 191 EAIKWDGSSGGVIRMVVLTAKGADRHLYLPDT 222
>gi|209878736|ref|XP_002140809.1| proteasome subunit beta type 6 precursor [Cryptosporidium muris
RN66]
gi|209556415|gb|EEA06460.1| proteasome subunit beta type 6 precursor, putative [Cryptosporidium
muris RN66]
Length = 213
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 91/147 (61%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
A+D+QT+ YVR H ++LG+ A VK A+L R++ Y NK +L G+IV G D Y+G
Sbjct: 65 ASDTQTIVQYVRKLTADHELELGEEARVKSVASLARIICYQNKEYLTAGLIVAGVDPYDG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
KI+ + LGG++IE+ +A+ GSGS+Y+Y D + M +E + + VS AI RD
Sbjct: 125 FKIFQIALGGSMIEKSYALSGSGSAYIYSLLDATYHTNMDIDECKDFARRLVSHAIFRDS 184
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGG++R V I EG PG+ LP
Sbjct: 185 SSGGLIRMVIITKEGYQELVIPGEELP 211
>gi|367002177|ref|XP_003685823.1| hypothetical protein TPHA_0E02990 [Tetrapisispora phaffii CBS 4417]
gi|357524122|emb|CCE63389.1| hypothetical protein TPHA_0E02990 [Tetrapisispora phaffii CBS 4417]
Length = 216
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +T Q G+P+T KVAA++ + + Y+NK+ L G+IV G+D E
Sbjct: 68 AADTQAVADIVQYQLELYTAQFGEPST-KVAASIFKTMCYDNKDNLSAGIIVAGFDDKEN 126
Query: 72 -GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ +Q +AI GSGS+++YG+ D+ +KE MTK+E + ++S AI D
Sbjct: 127 KGEVYSIPLGGSLHKQKYAIAGSGSTFIYGYCDKNYKENMTKDETVDFMKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + +GV R FYP
Sbjct: 187 GSSGGVIRMVVVTKDGVERLIFYP 210
>gi|50286241|ref|XP_445549.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524854|emb|CAG58460.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q V+D V+Y+L + Q G+P T AAN+ + L Y NK+ L G+
Sbjct: 59 NIWCCRS-GSAADTQAVADIVQYYLDMYEGQFGEPDTY-TAANMFKTLCYQNKDALTAGI 116
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV G+D+ G++Y +PLGG+I +QP+AI GSGS+++YG+ D+ ++E M+K+E +
Sbjct: 117 IVAGYDEKNKGEVYSIPLGGSIHKQPYAIAGSGSTFIYGYCDKNFRENMSKDETIDFIKH 176
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRK-FYP 153
++S AI DG+SGGV+R V + +G R FYP
Sbjct: 177 SLSQAIKWDGSSGGVIRMVVLTKDGPERLIFYP 209
>gi|291395997|ref|XP_002714703.1| PREDICTED: proteasome beta 9 subunit [Oryctolagus cuniculus]
Length = 219
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG L G +I QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LEGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|452837291|gb|EME39233.1| hypothetical protein DOTSEDRAFT_75081 [Dothistroma septosporum
NZE10]
Length = 231
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + I + T + AA + + L Y+NK+ L G+I+
Sbjct: 71 CCRS-GSAADTQAVADIVQYHLGMYGITNDEHPTTQTAAAIFQELCYDNKDTLSAGIIIA 129
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM+++E V A+
Sbjct: 130 GWDQRHGGQVYSIPLGGSLHKQAYAIGGSGSTYIYGYCDANWKEGMSEQEGINFVKGALQ 189
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + G R Y
Sbjct: 190 EAIKWDGSSGGVIRMVVLTKAGAVRHLY 217
>gi|363756318|ref|XP_003648375.1| hypothetical protein Ecym_8276 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891575|gb|AET41558.1| Hypothetical protein Ecym_8276 [Eremothecium cymbalariae
DBVPG#7215]
Length = 215
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 99/146 (67%), Gaps = 2/146 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D V++ L + Q G+P +V AA+L + Y NK+FL G+IV G+D
Sbjct: 67 SAADTQAVADIVQHHLDLYAAQYGEP-SVNTAASLFSTICYENKDFLTAGIIVAGYDDKN 125
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ +KE M+KEE + + ++S AI D
Sbjct: 126 KGEVYTIPLGGSVHKAPYAIAGSGSTFIYGYCDKNFKENMSKEETIRFMKHSLSQAIKWD 185
Query: 131 GASGGVVRTVTINSEGVSRK-FYPGD 155
G+SGGV+R V + EGV R FYP D
Sbjct: 186 GSSGGVIRMVVLTKEGVERLIFYPED 211
>gi|195430422|ref|XP_002063254.1| GK21488 [Drosophila willistoni]
gi|194159339|gb|EDW74240.1| GK21488 [Drosophila willistoni]
Length = 225
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L+ H IQ + A V AA+ R YN ++ L G+IV GWD G
Sbjct: 63 AADTQAIADIVAYSLNYHEIQTNRDAEVWEAASEFRNFCYNYRDSLMAGIIVAGWDAQRG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG + + IGGSGSS++YGF + ++EGM KEE + V KAV AI DG
Sbjct: 123 GQVYSIPLGGMLTREACTIGGSGSSFIYGFVREHYREGMQKEECVEFVKKAVQHAIYHDG 182
Query: 132 ASGGVVRTVTINSEGVSRK-FYPGDT-LPLWHEELEP 166
+SGGVVR I +G+ R+ F+ +T LP E E
Sbjct: 183 SSGGVVRIGIITEDGIERRLFFNTETGLPEVSERSES 219
>gi|296805598|ref|XP_002843623.1| proteasome component PRE3 [Arthroderma otae CBS 113480]
gi|238844925|gb|EEQ34587.1| proteasome component PRE3 [Arthroderma otae CBS 113480]
Length = 237
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + + + T + AA L + L Y+NK+ L G+I+
Sbjct: 77 CCRS-GSAADTQAVADIVKYHLGMYGVVYDKQPTTQTAAALFQELCYDNKDALSAGIIIA 135
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +QP+AIGGSGS+Y+YG+ D W+EGM + E + V ++
Sbjct: 136 GYDERHGGQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDAHWREGMDEAEGVEFVKNSLR 195
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY--------PGDTLP 158
AI DG+SGGV+R V + +G R Y PG + P
Sbjct: 196 EAIKWDGSSGGVIRMVVLTKQGAVRHLYLPDNGYTGPGSSAP 237
>gi|225712736|gb|ACO12214.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|225712738|gb|ACO12215.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|290462661|gb|ADD24378.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
gi|290561791|gb|ADD38293.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
Length = 227
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++ VRY L + + +G+ A V+ A + + + Y ++ L G+
Sbjct: 69 NILCCRS-GSAADTQAIAKAVRYNLDMYNVMMGETAPVETVAYMFKSICYEYRDSLTAGI 127
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
++GGWDK +GG++Y +PLGG + QP+ GGSGS YL+ F +K+ M+KEE L+VK
Sbjct: 128 LIGGWDKIKGGQVYSIPLGGMCVRQPYTSGGSGSVYLHAFMSANYKKDMSKEECRDLLVK 187
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
++ A+ DG+SGG R +I +G+ R D LP
Sbjct: 188 GIASAVEFDGSSGGSCRWASITKDGIERDIVLYDELP 224
>gi|345568170|gb|EGX51071.1| hypothetical protein AOL_s00054g807 [Arthrobotrys oligospora ATCC
24927]
Length = 231
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 89/128 (69%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D VRY L+ + Q G P +VK AA++ + + Y NK+ L G+IV G D++
Sbjct: 76 SAADTQAVADIVRYHLNLYETQNGHPPSVKTAASIFQEICYTNKDALTAGIIVAGVDRHH 135
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG+++ +PLGG++ + + I GSGSSY+YGF D WK+GMTKEE V +A+ AI D
Sbjct: 136 GGQVWNIPLGGSLHKSKYTIAGSGSSYIYGFCDSYWKDGMTKEEGMHFVKEALREAIKWD 195
Query: 131 GASGGVVR 138
G+SGGV+R
Sbjct: 196 GSSGGVIR 203
>gi|241953471|ref|XP_002419457.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223642797|emb|CAX43051.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 214
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 101/150 (67%), Gaps = 3/150 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q V+D V+Y+L ++ QL G+ T +AAN+ + + YNNK+ L G
Sbjct: 60 IYCCRS-GSAADTQAVADMVKYYLQIYSSQLPPGETPTTNIAANVFQEICYNNKDNLTAG 118
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I G+DK GG +Y +P+GG+I +Q +AI GSGSSY+YG+ D+ +K M +EE + V
Sbjct: 119 IICAGYDKKNGGSVYSIPIGGSIHKQNYAIAGSGSSYIYGWCDENFKPSMEQEECVEFVK 178
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRK 150
A+S AI DG+SGG++R V + ++GV R+
Sbjct: 179 TALSQAIKWDGSSGGLIRMVILTNKGVERR 208
>gi|354469669|ref|XP_003497248.1| PREDICTED: proteasome subunit beta type-6-like [Cricetulus griseus]
Length = 234
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H A +L + + Y + L G+
Sbjct: 73 RIFCCRS-GSAADTQAVADAVTYQLGFHRPP----PIAPPAPSLFKEMCYRYREDLMAGI 127
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q
Sbjct: 128 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYQEGMTKDECLQFTAN 187
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 188 ALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIP 224
>gi|315046746|ref|XP_003172748.1| hypothetical protein MGYG_05335 [Arthroderma gypseum CBS 118893]
gi|311343134|gb|EFR02337.1| hypothetical protein MGYG_05335 [Arthroderma gypseum CBS 118893]
Length = 228
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + + G+ T + AA L + L Y+NK+ L G+I+
Sbjct: 67 CCRS-GSAADTQAVADIVKYHLGMYGVVYGRQPTTQTAAALFQELCYDNKDALSAGIIIA 125
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +QP+AIGGSGS+Y+YG+ D W+E M + E + V ++
Sbjct: 126 GYDERHGGQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDAHWRENMDEAEGVEFVKNSLR 185
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + + G R Y
Sbjct: 186 EAIKWDGSSGGVIRMVVLTNRGAIRHLY 213
>gi|148678310|gb|EDL10257.1| proteosome (prosome, macropain) subunit, beta type 9 (large
multifunctional peptidase 2), isoform CRA_a [Mus
musculus]
Length = 159
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
Query: 28 QHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQP 87
+ ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG +I QP
Sbjct: 25 RFRLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGMLIRQP 83
Query: 88 FAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
F IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI + GV
Sbjct: 84 FTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGV 143
Query: 148 SRKFYPGDTLPLWHEE 163
+ GD LP +++E
Sbjct: 144 DHRVILGDELPKFYDE 159
>gi|242014499|ref|XP_002427927.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
gi|212512411|gb|EEB15189.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
Length = 226
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y ++ I+LG + V AAN+ + + Y+ ++ L G+I
Sbjct: 67 IYCCRS-GSAADTQAIADIVEYHMNLQNIELGSESLVSTAANVFKEICYSYRDSLTAGII 125
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG++Y +P+GG + Q A GGSGS+Y+YG+ D +K M+KEE+ V
Sbjct: 126 VAGYDSLYGGQVYCIPIGGMLQRQNVATGGSGSTYVYGYVDSHYKPNMSKEESVNFVTNT 185
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
V+LA+ RD +SGGV+R I+ G+ R+ G+ +P ++E
Sbjct: 186 VALAMMRDSSSGGVIRLGIIDENGIERRLIKGEDIPKFYE 225
>gi|429861989|gb|ELA36651.1| proteasome component [Colletotrichum gloeosporioides Nara gc5]
Length = 228
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 96/144 (66%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + ++ G+P + A + + + Y NK+ L G+I+ GWD+ G
Sbjct: 78 AADTQAVADIVQYQLGLYAMRNGKPPMTQTAGAIFQEICYANKDRLTAGLIIAGWDERHG 137
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGM +++A V A+ AI DG
Sbjct: 138 GQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMEEKDAVDFVKGALQEAIKWDG 197
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGV+R V + ++G R Y D
Sbjct: 198 SSGGVIRMVVLTAKGAQRHLYLPD 221
>gi|145341544|ref|XP_001415866.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576089|gb|ABO94158.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 246
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 93/152 (61%), Gaps = 5/152 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-----LQTGMIVGGW 66
AAD++ ++ YVR + QH ++L + A VK A + + Y NK L IVGGW
Sbjct: 66 AADTEALAGYVRNIVSQHEMELDEIADVKTVATIANQIGYQNKGANRGRGLSAYTIVGGW 125
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK G ++Y GG +I++ + GSGS+Y++GF D W+EGMT+EE E V KA++LA
Sbjct: 126 DKRRGSQVYACTAGGNMIKERWTTDGSGSTYIWGFLDSGWREGMTREECEAFVAKAIALA 185
Query: 127 IARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
++ DG+SGG +R +++ G+ R F G +P
Sbjct: 186 MSVDGSSGGCIRLNAVDASGIHRTFIQGSDVP 217
>gi|327305623|ref|XP_003237503.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326460501|gb|EGD85954.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 233
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + + G+ T + AA L + L Y+NK+ L G+I+
Sbjct: 72 CCRS-GSAADTQAVADIVKYHLGMYGVVYGRQPTTQTAAALFQELCYDNKDALSAGIIIA 130
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +QP+AIGGSGS+Y+YG+ D W+E M + E + V ++
Sbjct: 131 GYDERHGGQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDANWRENMDEAEGVEFVKNSLR 190
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + G R Y
Sbjct: 191 EAIKWDGSSGGVIRMVVLTRRGAVRHLY 218
>gi|367014735|ref|XP_003681867.1| hypothetical protein TDEL_0E04130 [Torulaspora delbrueckii]
gi|359749528|emb|CCE92656.1| hypothetical protein TDEL_0E04130 [Torulaspora delbrueckii]
Length = 219
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 99/145 (68%), Gaps = 2/145 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V+Y L +T Q G+P+T K AA + + L Y NK+ L G+IV G+D+
Sbjct: 72 AADTQAIADIVQYHLDLYTAQYGEPST-KTAAAVFKELCYENKDNLTAGIIVAGYDEKNK 130
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AI GSGS+++YG+ D+ +K+ MTK+E + ++S AI DG
Sbjct: 131 GEVYSIPLGGSMHKQKYAIAGSGSTFIYGYCDKNFKDDMTKDETVNFMKNSLSQAIKWDG 190
Query: 132 ASGGVVRTVTINSEGVSRK-FYPGD 155
+SGGV+R V + EG R FYP D
Sbjct: 191 SSGGVIRMVVLTKEGAERLIFYPED 215
>gi|326476802|gb|EGE00812.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326484480|gb|EGE08490.1| proteasome component PRE3 [Trichophyton equinum CBS 127.97]
Length = 228
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V+Y L + + G+ T + AA L + L Y+NK+ L G+I+
Sbjct: 67 CCRS-GSAADTQAVADIVKYHLGMYGVVYGRQPTTQTAAALFQELCYDNKDALSAGIIIA 125
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D+ GG++Y +PLGG++ +QP+AIGGSGS+Y+YG+ D W+E M + E + V ++
Sbjct: 126 GYDERHGGQVYSIPLGGSLHKQPYAIGGSGSTYIYGYCDANWRENMDEAEGVEFVKNSLR 185
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFY 152
AI DG+SGGV+R V + G R Y
Sbjct: 186 EAIKWDGSSGGVIRMVVLTRRGAVRHLY 213
>gi|367007118|ref|XP_003688289.1| hypothetical protein TPHA_0N00740 [Tetrapisispora phaffii CBS 4417]
gi|357526597|emb|CCE65855.1| hypothetical protein TPHA_0N00740 [Tetrapisispora phaffii CBS 4417]
Length = 216
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L +T Q G+P+T KVAA++ + + Y+NK+ L G+IV G+D E
Sbjct: 68 AADTQAVADIVQYQLELYTAQFGEPST-KVAASIFKTMCYDNKDNLSAGIIVAGFDDKEN 126
Query: 72 -GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ +Q +AI GSGS+++YG+ D+ +K+ MTK+E + ++S AI D
Sbjct: 127 KGEVYSIPLGGSLHKQKYAIAGSGSAFIYGYCDKNFKDDMTKDETVNFMKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + +GV R FYP
Sbjct: 187 GSSGGVIRMVVLTKDGVERLIFYP 210
>gi|254578806|ref|XP_002495389.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
gi|238938279|emb|CAR26456.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
Length = 215
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 103/154 (66%), Gaps = 8/154 (5%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y+L +T Q G+P+T + AA + + L Y NK+ L G+IV G+D+
Sbjct: 68 AADTQAVADIVQYYLDLYTAQYGEPST-RTAAAIFQQLCYENKDALTAGIIVAGYDEKNQ 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG++ +Q +AI GSGS+++YG+ D+ +K+GMTK+E + ++S AI DG
Sbjct: 127 GEVYSIPIGGSLHKQKYAIAGSGSTFIYGYCDKNYKDGMTKDETVDFIKHSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+SGGV+R V + GV R L ++ EE E
Sbjct: 187 SSGGVIRMVVLTKNGVER-------LIVYPEEFE 213
>gi|365984625|ref|XP_003669145.1| hypothetical protein NDAI_0C02420 [Naumovozyma dairenensis CBS 421]
gi|343767913|emb|CCD23902.1| hypothetical protein NDAI_0C02420 [Naumovozyma dairenensis CBS 421]
Length = 216
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L ++ Q G P+T K AA++ + L Y NK+ L G+IV G+D
Sbjct: 68 AADTQAVADIVQYHLDIYSTQFGTPST-KTAASVFKTLCYENKDNLTAGIIVAGFDDATN 126
Query: 72 -GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y VPLGG+I +Q +AI GSGS+++YG+ D+ +K+ MTK+E + ++S AI D
Sbjct: 127 KGEVYSVPLGGSIHKQKYAIAGSGSTFIYGYCDKNFKDDMTKDETVHFIKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + SEGV R FYP
Sbjct: 187 GSSGGVIRMVVLTSEGVERLIFYP 210
>gi|344300935|gb|EGW31247.1| hypothetical protein SPAPADRAFT_61824 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q V+D V+Y+L + QL + T ++AAN+ + + YNNK+ L G+I G+DK
Sbjct: 68 AADTQAVADMVKYYLQIYAAQLPPNETPTTEIAANVFQEICYNNKDNLTAGIICAGYDKK 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
GG +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K+GM K+E + A+S AI
Sbjct: 128 NGGSVYSIPIGGSIHKQDYAIAGSGSTFIYGWCNENFKQGMQKDECVDFIKTALSEAIKW 187
Query: 130 DGASGGVVRTVTINSEGVSR-KFYP 153
DG+SGGV+R V + +GV R FYP
Sbjct: 188 DGSSGGVIRMVILTEKGVERLIFYP 212
>gi|170036732|ref|XP_001846216.1| proteasome subunit beta type 6 [Culex quinquefasciatus]
gi|167879613|gb|EDS42996.1| proteasome subunit beta type 6 [Culex quinquefasciatus]
Length = 227
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L+ H Q G+ V AA+ R YN ++ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVAYSLNYHENQTGEEPLVSDAAHEFRQYCYNYRDSLVAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK GG++Y VP+GG I Q IGGSGSSY+YGF + ++EGM K+E + V K+
Sbjct: 117 VAGWDKKNGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMAKDECMEFVKKS 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRK--FYPGD 155
+ A+ DG+SGGV R IN +GV R F P D
Sbjct: 177 IFHAMYHDGSSGGVCRIGIINKDGVERHVFFAPRD 211
>gi|158300062|ref|XP_320065.4| AGAP009271-PA [Anopheles gambiae str. PEST]
gi|157013820|gb|EAA14913.4| AGAP009271-PA [Anopheles gambiae str. PEST]
Length = 229
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L+ H Q G+P V+ AAN R YN ++ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVAYSLNYHENQTGEPPLVEDAANEFRQYCYNYRDTLVAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWD GG++Y VP+GG I Q IGGSGSSY+YGF + ++EGM ++E + V K+
Sbjct: 117 VAGWDAKHGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKENYREGMPRDECVEFVKKS 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRK--FYPGD 155
+ A+ DG+SGGV R I +GV R+ F P D
Sbjct: 177 IFHAMYHDGSSGGVCRIGVITKDGVEREVFFAPRD 211
>gi|364285141|gb|AEW48021.1| proteasome subunit beta type 6 [Culex pipiens pallens]
Length = 227
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L+ H Q G+ V AA+ R YN ++ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVAYSLNYHENQTGEEPLVSDAAHEFRQYCYNYRDSLVAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWDK GG++Y VP+GG I Q IGGSGSSY+YGF + ++EGM K+E + V K+
Sbjct: 117 VAGWDKKNGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMAKDECMEFVKKS 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRK--FYPGD 155
+ A+ DG+SGGV R IN +GV R F P D
Sbjct: 177 IFHAMYHDGSSGGVCRIGIINKDGVERHVFFAPRD 211
>gi|366986665|ref|XP_003673099.1| hypothetical protein NCAS_0A01480 [Naumovozyma castellii CBS 4309]
gi|342298962|emb|CCC66706.1| hypothetical protein NCAS_0A01480 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK-YE 70
AAD+Q V+D V+Y+L +T Q G P+T K AA++ + L Y NK+ L G+IV G+D +
Sbjct: 68 AADTQAVADIVQYYLDLYTTQYGTPST-KTAASVFKTLCYENKDNLTAGIIVAGFDDDTK 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y VPLGG+I +Q +AI GSGS+++YG+ D+ +KE MTK+E + ++S AI D
Sbjct: 127 KGEVYSVPLGGSIHKQKYAIAGSGSTFIYGYCDKNFKEDMTKDETIHFIKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + GV R FYP
Sbjct: 187 GSSGGVIRMVILTESGVERLIFYP 210
>gi|194769458|ref|XP_001966821.1| GF19078 [Drosophila ananassae]
gi|190618342|gb|EDV33866.1| GF19078 [Drosophila ananassae]
Length = 569
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V + L+ H Q G+P TV AA R L Y +N L G+IV G+D +G
Sbjct: 65 AADTQAVADLVSHSLNYHQYQFGRPPTVWEAACDFRHLCYTYRNNLLAGIIVAGYDDKKG 124
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG ++ +P IGGSGSSY++G+ ++ +KE+ + K + LAI DG
Sbjct: 125 GQVYSIPLGGMLVREPCTIGGSGSSYIFGYVHDQYRPDFSKEQCVAFIRKCIQLAIHHDG 184
Query: 132 ASGGVVRTVTINSEGVSRKFY 152
+SGGV+R I ++GV R+ Y
Sbjct: 185 SSGGVIRIAIITADGVERRVY 205
>gi|410078369|ref|XP_003956766.1| hypothetical protein KAFR_0C06350 [Kazachstania africana CBS 2517]
gi|372463350|emb|CCF57631.1| hypothetical protein KAFR_0C06350 [Kazachstania africana CBS 2517]
Length = 216
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD-KYE 70
AAD+Q V+D V+Y L + Q G P ++K AA++ + + Y NK+ L G+IV G+D K E
Sbjct: 68 AADTQAVADIVQYHLELYESQYGAP-SIKTAASVFKSICYENKDNLSAGIIVAGFDDKNE 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG+I +Q +AI GSGS+++YG+ D+ +KE MTK+E + ++S AI D
Sbjct: 127 KGEVYSIPLGGSIHKQKYAIAGSGSTFIYGYCDKKFKEDMTKDETVNFIKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSR-KFYP 153
G+SGGV+R V + EGV R FYP
Sbjct: 187 GSSGGVIRMVILTKEGVERLIFYP 210
>gi|68482775|ref|XP_714697.1| hypothetical protein CaO19.6991 [Candida albicans SC5314]
gi|46436285|gb|EAK95650.1| hypothetical protein CaO19.6991 [Candida albicans SC5314]
gi|238880954|gb|EEQ44592.1| proteasome component PRE3 precursor [Candida albicans WO-1]
Length = 214
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 99/150 (66%), Gaps = 3/150 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q V+D V+Y+L ++ QL G+ T +AAN+ + + YNNK+ L G
Sbjct: 60 IYCCRS-GSAADTQAVADMVKYYLQIYSSQLPPGETPTTNIAANVFQEICYNNKDNLTAG 118
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I G+D+ GG +Y +P+GG+I +Q +AI GSGSSY+YG+ D+ +K M +E+ + V
Sbjct: 119 IICAGYDRKNGGSVYSIPIGGSIHKQNYAIAGSGSSYIYGWCDENYKPSMEQEQCVEFVK 178
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRK 150
A+S AI DG+SGG++R V + GV R+
Sbjct: 179 TALSQAIKWDGSSGGLIRMVILTKNGVERR 208
>gi|320582637|gb|EFW96854.1| proteasome component Pre3, putative [Ogataea parapolymorpha DL-1]
Length = 216
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+Y L + G+P T K+AA+L + L Y NK L G+I G+D+ G
Sbjct: 68 AADTQAVADIVKYHLEMYKANNGRPPTTKIAASLFQELCYANKEMLTAGIICAGYDEKNG 127
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ + +AI GSGS+++YG+ + +K+ MTK+E V ++S AI DG
Sbjct: 128 GQVYSIPLGGSLHKHEYAIAGSGSAFIYGYCKKNFKQDMTKDETVSFVKTSLSQAIRWDG 187
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + +G+ R FYP
Sbjct: 188 SSGGVIRLVVLTKDGIERLIFYP 210
>gi|401410082|ref|XP_003884489.1| Proteasome subunit beta type-7, related [Neospora caninum
Liverpool]
gi|325118907|emb|CBZ54459.1| Proteasome subunit beta type-7, related [Neospora caninum
Liverpool]
Length = 242
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMI 62
C+ AAD+Q V+ V+ ++ Q+ +L G+ V+ AAN+ + L Y +K+ L G+I
Sbjct: 84 CVCRSGSAADTQAVTQIVKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLI 143
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+DK +GG+IY +PLGG ++ + GGSGS+++ F D +K+ MT++EA +LV K+
Sbjct: 144 VAGYDKVKGGQIYAIPLGGALMPMNYTAGGSGSAFISAFMDANFKDNMTQQEAVELVKKS 203
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
V+ AI+RDG+SGG++R V I + + + GD LP+
Sbjct: 204 VAYAISRDGSSGGMIRIVVITKDDMLEECVEGDKLPV 240
>gi|147225181|emb|CAN13313.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Sus scrofa]
Length = 175
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 92/133 (69%), Gaps = 1/133 (0%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
++L +P V AAN+VR +SY + L ++V GWD+ EGG++YG +GG +I QPFAI
Sbjct: 44 MELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-MGGMLIRQPFAI 102
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
GGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RDG+SGGV+ VTI + GV +
Sbjct: 103 GGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRDGSSGGVIYLVTITAAGVDHR 162
Query: 151 FYPGDTLPLWHEE 163
G+ LP +++E
Sbjct: 163 VILGNELPKFYDE 175
>gi|348576420|ref|XP_003473985.1| PREDICTED: proteasome subunit beta type-9-like [Cavia porcellus]
Length = 219
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q + D Y L H ++L + V AAN+V+ +SY + L +IV GWD+ G
Sbjct: 69 AADAQAMVDLAAYQLELHGMELEESPLVLAAANVVKNVSYKYREELSAHLIVAGWDQRAG 128
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG +GG + QPF IGGSGS+Y++G+ D A+K GM+ EE + A++LA+ RD
Sbjct: 129 GQVYGT-IGGMLTRQPFIIGGSGSTYIHGYVDAAYKPGMSPEECRRFTTDAIALAMNRDC 187
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 188 SSGGVIYLVTITAAGVDHRVILGNELPKFYDE 219
>gi|281338480|gb|EFB14064.1| hypothetical protein PANDA_002292 [Ailuropoda melanoleuca]
Length = 176
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q + D Y L H ++L +P V AAN+VR +SY + L ++V GWD+ G
Sbjct: 26 AADAQAMVDTATYQLELHGLELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRGG 85
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE A++LA+ RDG
Sbjct: 86 GQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAITLAMNRDG 144
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
+SGGV+ VTI + GV + G+ LP +++E
Sbjct: 145 SSGGVIYLVTITAAGVDHQVILGNELPKFYDE 176
>gi|225719600|gb|ACO15646.1| Proteasome subunit beta type-6 precursor [Caligus clemensi]
Length = 230
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 94/148 (63%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++ +RY L + + +G+ A V+ A+L + + Y ++ L G++VGGWDK
Sbjct: 80 SAADTQAIAKAIRYNLDMYNVMMGETAPVETVAHLFKSICYEYRDSLTAGILVGGWDKIR 139
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + Q +A GGSGS YL+ F +KEGM KE+ ++++++ ++ A+ D
Sbjct: 140 GGQVYSIPLGGMCVRQAYASGGSGSVYLHAFMSANYKEGMNKEDCKKMLIRGIASAVEFD 199
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
G+SGG R +I +G+ + D LP
Sbjct: 200 GSSGGSCRWASITKDGIEKGVVLYDELP 227
>gi|312377502|gb|EFR24316.1| hypothetical protein AND_11170 [Anopheles darlingi]
Length = 317
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L H Q G+ V+ AAN R Y ++ L G+
Sbjct: 37 KIYCCRS-GSAADTQAIADIVAYSLDYHENQTGEEPLVEDAANEFRKYCYEYRSSLVAGI 95
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG++Y +PLGG I Q IGGSGSSY+YGF + ++EGM ++E + V K
Sbjct: 96 IVAGWDRKHGGQVYSIPLGGMQIRQSVTIGGSGSSYIYGFVKENYREGMPRDECVEFVKK 155
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVA 177
AV A+ DG+SGGV R I +GV R+ + P +E + P + L ++V
Sbjct: 156 AVFHAMYHDGSSGGVCRIGIITKDGVERQVF---FAPRDYENVPPLPARLRRISVC 208
>gi|121711373|ref|XP_001273302.1| proteasome component Pre3, putative [Aspergillus clavatus NRRL 1]
gi|119401453|gb|EAW11876.1| proteasome component Pre3, putative [Aspergillus clavatus NRRL 1]
Length = 229
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R AAD+Q V+D V Y L+ + I + + +VAA L + L Y NK+ L G+I+
Sbjct: 68 CCRS-GSAADTQAVADIVSYHLNMYGIVNNEAPSTQVAAALFQELCYENKDMLSAGIIIA 126
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D GG++Y +PLGG++ +Q +AI GSGS+Y+YG+ D WKE MT+EE V A+
Sbjct: 127 GYDPRHGGQVYSIPLGGSLHKQSYAIAGSGSTYIYGYCDANWKENMTEEEGIDFVRGALQ 186
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + G R Y D
Sbjct: 187 EAIKWDGSSGGVIRLVVLTRRGAERHLYLPD 217
>gi|45184652|ref|NP_982370.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|44979998|gb|AAS50194.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|374105568|gb|AEY94479.1| FAAL172Cp [Ashbya gossypii FDAG1]
Length = 215
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V+++L +T+Q G+P + AA+L + Y NK+ L G+IV G+D
Sbjct: 68 AADTQAVADMVQHYLELYTMQYGEP-SASTAASLFSTICYENKDHLTAGIIVAGYDDKNK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI DG
Sbjct: 127 GEVYSIPLGGSVHKAPYAIAGSGSTFIYGYCDKHFREDMSKEETIDFMKHSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRK-FYPGD 155
+SGGV+R V + G R FYP D
Sbjct: 187 SSGGVIRMVVLTEAGAERLIFYPED 211
>gi|294655964|ref|XP_458199.2| DEHA2C12034p [Debaryomyces hansenii CBS767]
gi|199430751|emb|CAG86275.2| DEHA2C12034p [Debaryomyces hansenii CBS767]
Length = 217
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 98/147 (66%), Gaps = 3/147 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q V+D V+Y L ++ QL + T KVAAN+ + L YNNK+ L G+I G+DK
Sbjct: 68 AADTQAVADIVKYHLQVYSSQLPNNEKPTTKVAANVFQELCYNNKDGLTAGIICAGYDKQ 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K M K++ Q + A+S AI
Sbjct: 128 NKGSVYSIPIGGSIHQQDYAIAGSGSTFIYGWCNENYKPEMEKDDCVQFIKTALSEAIKW 187
Query: 130 DGASGGVVRTVTINSEGVSR-KFYPGD 155
DG+SGGV+R V + +GV R FYP D
Sbjct: 188 DGSSGGVIRMVILTEKGVERLIFYPED 214
>gi|395832106|ref|XP_003789117.1| PREDICTED: proteasome subunit beta type-9 [Otolemur garnettii]
Length = 219
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H ++L + V AA +VR ++Y + L ++V GWD+ E
Sbjct: 68 SAADAQAVADMAAYQLELHGLELEEAPLVLAAATVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA++RD
Sbjct: 128 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRD 186
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV+ VTI + GV + G+ LP ++++
Sbjct: 187 GSSGGVIYLVTITAAGVDHRVILGNELPKFYDD 219
>gi|198460983|ref|XP_001361869.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
gi|198137197|gb|EAL26448.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L+ H Q + A V AA+ R YN ++ L G+
Sbjct: 55 KIYCCRS-GSAADTQAIADIVAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGI 113
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG+++ +PLGG + +P IGGSGSS++YG+ + + EGM+KEE + V
Sbjct: 114 IVAGWDEQRGGQVFSIPLGGMLTREPCTIGGSGSSFIYGYVREHFHEGMSKEECVKFVKT 173
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
AV AI DG+SGGVVR I EGV R+ +
Sbjct: 174 AVQHAIYHDGSSGGVVRVGIITKEGVERRLF 204
>gi|476044|emb|CAA55591.1| proteasomal subunit Pre3 [Saccharomyces cerevisiae]
gi|854572|emb|CAA60921.1| proteasome component pre3 [Saccharomyces cerevisiae]
gi|207343916|gb|EDZ71228.1| YJL001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323304338|gb|EGA58111.1| Pre3p [Saccharomyces cerevisiae FostersB]
gi|323354485|gb|EGA86324.1| Pre3p [Saccharomyces cerevisiae VL3]
gi|365764803|gb|EHN06323.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|741845|prf||2008180A peptidyl-Glu protease
Length = 193
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 46 AADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKNK 104
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI DG
Sbjct: 105 GEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDG 164
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + + GV R FYP
Sbjct: 165 SSGGVIRMVVLTAAGVERLIFYP 187
>gi|256270206|gb|EEU05428.1| Pre3p [Saccharomyces cerevisiae JAY291]
Length = 216
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 69 AADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKNK 127
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI DG
Sbjct: 128 GEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDG 187
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + + GV R FYP
Sbjct: 188 SSGGVIRMVVLTAAGVERLIFYP 210
>gi|11513426|pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513440|pdb|1G65|2 Chain 2, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11514005|pdb|1G0U|N Chain N, A Gated Channel Into The Proteasome Core Particle
gi|11514019|pdb|1G0U|2 Chain 2, A Gated Channel Into The Proteasome Core Particle
gi|14488812|pdb|1FNT|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488826|pdb|1FNT|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150390|pdb|1JD2|N Chain N, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150397|pdb|1JD2|U Chain U, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765706|pdb|1Z7Q|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765720|pdb|1Z7Q|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279381|pdb|2F16|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279395|pdb|2F16|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032215|pdb|2FAK|N Chain N, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032229|pdb|2FAK|2 Chain 2, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490856|pdb|2GPL|N Chain N, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490870|pdb|2GPL|2 Chain 2, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847473|pdb|2ZCY|N Chain N, Yeast 20s Proteasome:syringolin A-Complex
gi|178847487|pdb|2ZCY|1 Chain 1, Yeast 20s Proteasome:syringolin A-Complex
gi|178847515|pdb|3BDM|N Chain N, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847529|pdb|3BDM|1 Chain 1, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016380|pdb|3D29|N Chain N, Proteasome Inhibition By Fellutamide B
gi|190016394|pdb|3D29|2 Chain 2, Proteasome Inhibition By Fellutamide B
gi|197725334|pdb|3E47|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725348|pdb|3E47|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939225|pdb|3DY3|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939239|pdb|3DY3|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939253|pdb|3DY4|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939267|pdb|3DY4|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828250|pdb|3GPJ|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828264|pdb|3GPJ|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588334|pdb|3GPT|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588348|pdb|3GPT|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588362|pdb|3GPW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588376|pdb|3GPW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588556|pdb|3HYE|N Chain N, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588570|pdb|3HYE|2 Chain 2, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689394|pdb|3MG4|N Chain N, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689408|pdb|3MG4|2 Chain 2, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361157|pdb|3MG0|N Chain N, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361171|pdb|3MG0|2 Chain 2, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361185|pdb|3MG6|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361199|pdb|3MG6|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361213|pdb|3MG7|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361227|pdb|3MG7|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361241|pdb|3MG8|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361255|pdb|3MG8|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892354|pdb|3OKJ|N Chain N, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892368|pdb|3OKJ|2 Chain 2, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780432|pdb|3OEU|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780446|pdb|3OEU|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780460|pdb|3OEV|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780474|pdb|3OEV|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610685|pdb|3TDD|N Chain N, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610699|pdb|3TDD|2 Chain 2, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545859|pdb|3SHJ|N Chain N, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545873|pdb|3SHJ|2 Chain 2, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792254|pdb|3UN4|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792268|pdb|3UN4|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792288|pdb|3UN8|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792302|pdb|3UN8|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980829|pdb|3SDI|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980843|pdb|3SDI|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980857|pdb|3SDK|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980871|pdb|3SDK|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550745|pdb|4GK7|N Chain N, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550759|pdb|4GK7|BB Chain b, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072198|pdb|4G4S|H Chain H, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973873|pdb|4FZC|N Chain N, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973887|pdb|4FZC|BB Chain b, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973901|pdb|4FZG|N Chain N, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973915|pdb|4FZG|BB Chain b, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302352|pdb|4INR|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302366|pdb|4INR|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302380|pdb|4INT|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302394|pdb|4INT|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302408|pdb|4INU|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302422|pdb|4INU|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 196
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 98/144 (68%), Gaps = 2/144 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 48 SAADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKN 106
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI D
Sbjct: 107 KGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWD 166
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + + GV R FYP
Sbjct: 167 GSSGGVIRMVVLTAAGVERLIFYP 190
>gi|195170326|ref|XP_002025964.1| GL10209 [Drosophila persimilis]
gi|194110828|gb|EDW32871.1| GL10209 [Drosophila persimilis]
Length = 225
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L+ H Q + A V AA+ R YN ++ L G+
Sbjct: 55 KIYCCRS-GSAADTQAIADIVAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGI 113
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG+++ +PLGG + +P IGGSGSS++YG+ + + EGM+KEE + V
Sbjct: 114 IVAGWDEQRGGQVFSIPLGGMLTREPCTIGGSGSSFIYGYVREHFHEGMSKEECVKFVKT 173
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
AV AI DG+SGGVVR I EGV R+ +
Sbjct: 174 AVQHAIYHDGSSGGVVRVGIITKEGVERRLF 204
>gi|298508229|pdb|1VSY|H Chain H, Proteasome Activator Complex
gi|298508243|pdb|1VSY|V Chain V, Proteasome Activator Complex
gi|298508445|pdb|3L5Q|B Chain B, Proteasome Activator Complex
gi|298508459|pdb|3L5Q|D Chain D, Proteasome Activator Complex
Length = 196
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 98/144 (68%), Gaps = 2/144 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 48 SAADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKN 106
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI D
Sbjct: 107 KGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWD 166
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + + GV R FYP
Sbjct: 167 GSSGGVIRMVVLTAAGVERLIFYP 190
>gi|391339580|ref|XP_003744126.1| PREDICTED: proteasome subunit beta type-6-like [Metaseiulus
occidentalis]
Length = 212
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L + +Q G+PATV+ AAN+ R + Y ++ + G+I G+D
Sbjct: 60 SAADTQCIADAVAYHLAFYEMQTGKPATVEAAANVFRNICYKYRDDMVAGIICAGYDDER 119
Query: 71 GGKIYGVPLGGTIIEQPFAI-GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
GG IY +P GG ++E+ I GSGS ++ GF D +K M+KEE L +KAVSLAI +
Sbjct: 120 GGGIYSIPPGGCLVEEKRVISAGSGSVFISGFLDALFKNNMSKEECVDLCLKAVSLAIHK 179
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
D +SGGV R I +GV RK + + L +
Sbjct: 180 DTSSGGVCRMAVITKDGVERKLFLNNELVQYE 211
>gi|3114276|pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114290|pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
Length = 205
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 98/144 (68%), Gaps = 2/144 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 57 SAADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKN 115
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI D
Sbjct: 116 KGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWD 175
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + + GV R FYP
Sbjct: 176 GSSGGVIRMVVLTAAGVERLIFYP 199
>gi|328787541|ref|XP_393321.4| PREDICTED: proteasome subunit beta type-6-like [Apis mellifera]
Length = 210
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
Query: 13 ADSQT-VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AD T ++DY+ I+ V+ AAN+ R L YN ++ L G++V GWD +G
Sbjct: 63 ADKLTKITDYIYCCRSGSAIE----PLVETAANVFRELCYNYRDSLMAGILVAGWDSRKG 118
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG + QP +IGGSGS+Y+YG+ D +K M+K E +LV ++LA++RDG
Sbjct: 119 GQVYSVPIGGMCVRQPISIGGSGSTYVYGYMDSQYKPNMSKNECVKLVENTLALAMSRDG 178
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
+SGGV+R I ++G+ RK G+ LP ++E
Sbjct: 179 SSGGVIRIGVITNKGIERKVILGNELPRFYE 209
>gi|6322459|ref|NP_012533.1| Pre3p [Saccharomyces cerevisiae S288c]
gi|1172606|sp|P38624.2|PSB1_YEAST RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit PRE3; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE3;
AltName: Full=Proteasome component PRE3; AltName:
Full=Proteinase YSCE subunit PRE3; Flags: Precursor
gi|323462949|pdb|3NZJ|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462963|pdb|3NZJ|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462977|pdb|3NZW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462991|pdb|3NZW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463005|pdb|3NZX|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463019|pdb|3NZX|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|403071954|pdb|4B4T|1 Chain 1, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|2131077|emb|CAA89290.1| PRE3 [Saccharomyces cerevisiae]
gi|151945075|gb|EDN63326.1| 20S proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190409486|gb|EDV12751.1| 20S proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|285812892|tpg|DAA08790.1| TPA: Pre3p [Saccharomyces cerevisiae S288c]
gi|290771204|emb|CBK33732.1| Pre3p [Saccharomyces cerevisiae EC1118]
gi|349579189|dbj|GAA24352.1| K7_Pre3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298426|gb|EIW09523.1| Pre3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 68 AADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKNK 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI DG
Sbjct: 127 GEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDG 186
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R V + + GV R FYP
Sbjct: 187 SSGGVIRMVVLTAAGVERLIFYP 209
>gi|156036260|ref|XP_001586241.1| hypothetical protein SS1G_12818 [Sclerotinia sclerotiorum 1980]
gi|154698224|gb|EDN97962.1| hypothetical protein SS1G_12818 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 153
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%)
Query: 17 TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYG 76
+V+D V Y L + + G+ T + AA + + L Y+NK+ L G+I+ GWD+ GG++Y
Sbjct: 7 SVADIVHYQLGMYGVLNGKTPTTQTAAAMFQELCYDNKDQLSAGLIIAGWDERHGGQVYS 66
Query: 77 VPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGV 136
+PLGG++ +Q +AIGGSGS+Y+YG+ D WKEGM + +A V A+ AI DG+SGGV
Sbjct: 67 IPLGGSLHKQSYAIGGSGSTYIYGYCDANWKEGMEEADAVDFVKGALQEAIKWDGSSGGV 126
Query: 137 VRTVTINSEGVSRKFYPGDT 156
+R V + ++G +R Y DT
Sbjct: 127 IRMVVLTAKGANRHLYLPDT 146
>gi|342320859|gb|EGU12797.1| Proteasome subunit beta type [Rhodotorula glutinis ATCC 204091]
Length = 203
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 92/144 (63%)
Query: 15 SQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKI 74
++ V+D V L Q+ + G+ TV +AA ++ + Y NK+ L G+IV GWD+ GG +
Sbjct: 53 NRAVADVVTAQLSQYEMTHGEKPTVHIAATMLEGIIYQNKDRLSAGIIVAGWDRIAGGTV 112
Query: 75 YGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG 134
Y +PLGG + P+ I GSGS++++G+ D+ ++ G K++ + V +SLA++RDG+SG
Sbjct: 113 YNIPLGGGLFSAPWCIAGSGSTFVWGYCDKTFEPGWNKDQTLEFVRDTLSLAMSRDGSSG 172
Query: 135 GVVRTVTINSEGVSRKFYPGDTLP 158
G +R I EGV R F PGD LP
Sbjct: 173 GTIRMAIITEEGVERVFVPGDKLP 196
>gi|365759936|gb|EHN01692.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840755|gb|EJT43449.1| PRE3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 193
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 99/144 (68%), Gaps = 2/144 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 45 SAADTQAIADIVQYHLELYTSQYGPPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKN 103
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +P+GG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI D
Sbjct: 104 KGEVYTIPIGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWD 163
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + ++GV R FYP
Sbjct: 164 GSSGGVIRMVVLTADGVERLIFYP 187
>gi|190347256|gb|EDK39498.2| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
6260]
Length = 217
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q ++D V+Y++ +T QL + T ++AAN+ + L Y NK+ L G+I G+D+
Sbjct: 68 AADTQAIADIVKYYMQIYTSQLPHDEKPTTQIAANIFQELCYKNKDNLTAGIICAGYDEK 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K+ M K+E + A+S AI
Sbjct: 128 NKGTVYSIPIGGSIHQQEYAIAGSGSTFIYGWCNENYKKDMEKDECVSFIKTALSEAIKW 187
Query: 130 DGASGGVVRTVTINSEGVSRK-FYP 153
DG+SGGV+R V + ++GV RK FYP
Sbjct: 188 DGSSGGVIRMVVLTADGVERKIFYP 212
>gi|260940863|ref|XP_002615271.1| hypothetical protein CLUG_04153 [Clavispora lusitaniae ATCC 42720]
gi|238850561|gb|EEQ40025.1| hypothetical protein CLUG_04153 [Clavispora lusitaniae ATCC 42720]
Length = 218
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 100/157 (63%), Gaps = 4/157 (2%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQT 59
I C R AAD+Q V+D V+Y+L + QL G+ T +VAAN + L Y+NK+ L
Sbjct: 59 TIYCCRS-GSAADTQAVADIVKYYLQMYAAQLPAGEKPTTEVAANTFQELCYSNKDNLSA 117
Query: 60 GMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
G+I G+D GG +Y +P+GG+I +Q +AI GSGS+++YG+ D+ ++ M K+E +
Sbjct: 118 GIICAGYDAKSGGAVYSIPIGGSIHKQEYAIAGSGSTFIYGWCDKNFRPQMEKDECVSFI 177
Query: 120 VKAVSLAIARDGASGGVVRTVTINSEGVSRK-FYPGD 155
A++ AI DG+SGGVVR V + +GV R+ YP D
Sbjct: 178 RSALAEAIKWDGSSGGVVRMVILTKDGVERRILYPED 214
>gi|225717640|gb|ACO14666.1| Proteasome subunit beta type-6 precursor [Caligus clemensi]
Length = 230
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 93/148 (62%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++ +RY L + + +G+ A V+ A+L + + Y ++ L G++VGGWDK
Sbjct: 80 SAADTQAIAKAIRYNLDMYNVMMGETAPVETVAHLFKSICYEYRDSLTAGILVGGWDKIR 139
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + Q + GGSGS YL+ F +KEGM KE+ ++++++ ++ A+ D
Sbjct: 140 GGQVYSIPLGGMCVRQAYTSGGSGSVYLHAFMSANYKEGMNKEDCKKMLIRGIASAVEFD 199
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
G+SGG R +I +G+ + D LP
Sbjct: 200 GSSGGSCRWASITKDGIEKGVVLYDELP 227
>gi|403217165|emb|CCK71660.1| hypothetical protein KNAG_0H02450 [Kazachstania naganishii CBS
8797]
Length = 216
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD-KYE 70
AAD+Q V+D V+Y L +T Q G P +++ AA + + L+Y NK+ L G+IV G+D K +
Sbjct: 68 AADTQAVADIVQYHLELYTSQYGTP-SIETAAAVFKTLTYENKDALSAGIIVAGYDDKKK 126
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ +Q +AI GSGS+++YG+ D+ ++E M KEE + V ++S AI D
Sbjct: 127 KGEVYSIPLGGSVHKQKYAIAGSGSAFIYGYCDKNYRENMNKEETVEFVKHSLSQAIKWD 186
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
G+SGGV+R V + GV R FYP
Sbjct: 187 GSSGGVIRLVILTESGVERLIFYP 210
>gi|52547778|gb|AAU81924.1| low molecular mass protein 2, partial [Marmota monax]
Length = 192
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q V+D Y L H ++L +P V AAN++R ++Y + L ++V GWD+ E
Sbjct: 48 SAADAQAVADMAAYQLELHGLELEEPPLVLAAANVIRNITYKYREDLSAHLMVAGWDQRE 107
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GMT EE + A++LA+ RD
Sbjct: 108 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRD 166
Query: 131 GASGGVVRTVTINSEGVSRKFYPGD 155
G+SGGV+ VT+ + GV + G+
Sbjct: 167 GSSGGVIYLVTVTAAGVDHRVILGN 191
>gi|448528122|ref|XP_003869666.1| Pre3 beta-1 proteasome subunit [Candida orthopsilosis Co 90-125]
gi|380354019|emb|CCG23533.1| Pre3 beta-1 proteasome subunit [Candida orthopsilosis]
Length = 223
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q V+D V+Y+L ++ QL GQ T +AAN+ + + YNNK+ L G
Sbjct: 60 IYCCRS-GSAADTQAVADMVKYYLQIYSSQLPNGQKPTTNIAANVFQEICYNNKDNLTAG 118
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I G+D GG +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K M K+E + +
Sbjct: 119 IICAGYDDKYGGSVYSIPIGGSIHKQNYAIAGSGSTFIYGWCNENYKPDMDKDETVEFIK 178
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRK-FYP 153
A++ AI DG+SGGV+R V + +GV R FYP
Sbjct: 179 TALAEAIKWDGSSGGVIRMVILTKKGVERLIFYP 212
>gi|351710642|gb|EHB13561.1| Proteasome subunit beta type-6 [Heterocephalus glaber]
Length = 211
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 82/120 (68%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
I+L +P V AA+L + + Y + L G+IV GWD EGG++Y VP+GG ++ Q FAI
Sbjct: 58 IELNEPPLVHTAASLFKEMCYRYREDLMAGIIVAGWDPQEGGQVYSVPMGGMMVRQSFAI 117
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
GGSGSSY+YG+ D +++GMTK+E Q A++LA+ RDG+SGGV+R I GV R+
Sbjct: 118 GGSGSSYIYGYVDATYRKGMTKDECLQFTANALALAMERDGSSGGVIRLAAIEESGVERQ 177
>gi|354547392|emb|CCE44127.1| hypothetical protein CPAR2_503510 [Candida parapsilosis]
Length = 223
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q V+D V+Y+L ++ QL GQ T +AAN+ + + YNNK+ L G
Sbjct: 60 IYCCRS-GSAADTQAVADMVKYYLQIYSSQLPVGQKPTTNIAANVFQEICYNNKDNLTAG 118
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I G+D GG +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K M K+E +
Sbjct: 119 IICAGYDDKYGGSVYSIPIGGSIHKQDYAIAGSGSTFIYGWCNENYKPSMEKDETVDFIK 178
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRK-FYP 153
A++ AI DG+SGGV+R V + +GV R FYP
Sbjct: 179 TALAEAIKWDGSSGGVIRMVILTKKGVERLIFYP 212
>gi|388521783|gb|AFK48953.1| unknown [Lotus japonicus]
Length = 160
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/63 (93%), Positives = 62/63 (98%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AADSQ VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFL+TG+IVGGWDKYEG
Sbjct: 63 AADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEG 122
Query: 72 GKI 74
G+I
Sbjct: 123 GQI 125
>gi|390468792|ref|XP_003734000.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-6-like
[Callithrix jacchus]
Length = 246
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 92/147 (62%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L H+ +L +P V +AA+L + + Y + L G+I G D EG
Sbjct: 90 AADTQAVADAVTYQLGFHSTELNEPPLVHIAASLFKEMCYQYREDLMAGIITTGXDPQEG 149
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+GG ++ Q FAIGG SSY+YG+ D + +GMTKEE Q A++LA+ +DG
Sbjct: 150 GQVYSVPMGGMMVRQSFAIGGFRSSYIYGYVDATYWKGMTKEECLQFTANALALAMEQDG 209
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SG V+ I GV ++ GD +P
Sbjct: 210 SSGEVICLAAIAESGVEQQVLXGDXIP 236
>gi|146416491|ref|XP_001484215.1| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
6260]
Length = 217
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q ++D V+Y++ +T QL + T ++AAN+ + L Y NK+ L G+I G+D+
Sbjct: 68 AADTQAIADIVKYYMQIYTSQLPHDEKPTTQIAANIFQELCYKNKDNLTAGIICAGYDEK 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K+ M K+E + A+S AI
Sbjct: 128 NKGTVYLIPIGGSIHQQEYAIAGSGSTFIYGWCNENYKKDMEKDECVSFIKTALSEAIKW 187
Query: 130 DGASGGVVRTVTINSEGVSRK-FYP 153
DG+SGGV+R V + ++GV RK FYP
Sbjct: 188 DGSSGGVIRMVVLTADGVERKIFYP 212
>gi|55162807|emb|CAH63455.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Canis lupus familiaris]
Length = 165
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 90/133 (67%), Gaps = 1/133 (0%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
++L +P V AAN+VR +SY + L +++ GWD+ +GG++YG +GG + QPFAI
Sbjct: 34 LELEEPPLVLAAANVVRNISYKYREDLSAHLMIAGWDRRDGGQVYGT-MGGMLTRQPFAI 92
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
GGSGS+Y+YG+ D A+K GM+ EE A++LA+ RDG+SGGV+ VTI + GV +
Sbjct: 93 GGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAIALAMNRDGSSGGVIHLVTITAAGVDYQ 152
Query: 151 FYPGDTLPLWHEE 163
G+ LP +++E
Sbjct: 153 VILGNELPKFYDE 165
>gi|50556048|ref|XP_505432.1| YALI0F14861p [Yarrowia lipolytica]
gi|49651302|emb|CAG78241.1| YALI0F14861p [Yarrowia lipolytica CLIB122]
Length = 217
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L + Q + + KVAA++ + L YNNK+ L G+IV G+D G
Sbjct: 68 AADTQAVADIVTYHLQSYAAQNDKDPSTKVAASMFQELCYNNKDNLTAGIIVAGYDDKNG 127
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG++ +Q +AI GSGS+Y+YG + +K+ MTK+E + +++ AI DG
Sbjct: 128 GEVYSIPLGGSLHKQDYAIAGSGSTYIYGLCQKNFKQDMTKDECVLFIKNSLAQAIKWDG 187
Query: 132 ASGGVVRTVTINSEGVSRK-FYP 153
+SGGV+R + +G R+ F+P
Sbjct: 188 SSGGVIRICILTKDGAERQIFFP 210
>gi|149245900|ref|XP_001527420.1| proteasome component PRE3 precursor [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449814|gb|EDK44070.1| proteasome component PRE3 precursor [Lodderomyces elongisporus NRRL
YB-4239]
Length = 223
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q V+D V+Y+L ++ QL G+ T +AAN+ + + YNNK+ L G
Sbjct: 60 IYCCRS-GSAADTQAVADMVKYYLQIYSAQLPYGKKPTTNIAANVFQEICYNNKDNLTAG 118
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I G+D GG +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K M K+E + +
Sbjct: 119 IICAGYDDKYGGSVYSIPIGGSIHKQEYAIAGSGSTFIYGWCNENYKPNMEKQETVEFIQ 178
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRK-FYP 153
A++ AI DG+SGGV+R V + GV R FYP
Sbjct: 179 TALAEAIKWDGSSGGVIRMVILTKAGVERLIFYP 212
>gi|237833495|ref|XP_002366045.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|211963709|gb|EEA98904.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|221486248|gb|EEE24509.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii GT1]
Length = 245
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMI 62
C+ AAD+Q V+ V+ ++ Q+ +L G+ V+ AAN+ + L Y +K+ L G+I
Sbjct: 87 CVCRSGSAADTQAVTQIVKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLI 146
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+DK +GG+IY +PLGG ++ + GGSGS+++ + D +K+ MT+EEA LV +
Sbjct: 147 VAGFDKVKGGQIYALPLGGALVPMQYTAGGSGSAFISAYMDANFKQNMTQEEAVNLVKNS 206
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
V+ AI+RDG+SGG+VR V I + + + G+ LP+
Sbjct: 207 VAYAISRDGSSGGMVRVVVITEDAMLEECVEGNKLPV 243
>gi|150864238|ref|XP_001382979.2| hypothetical protein PICST_41720 [Scheffersomyces stipitis CBS
6054]
gi|149385494|gb|ABN64950.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 97/145 (66%), Gaps = 3/145 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q V+D V+Y+L + QL + T +VAAN+ + L YNNK+ L G+I G+DK
Sbjct: 68 AADTQAVADIVKYYLQIYASQLPNDEKPTTQVAANVFQELCYNNKDNLTAGIICAGYDKK 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y +P+GG+I +Q +AI GSGS+++YG+ ++ +K M ++E + + A+S AI
Sbjct: 128 NKGSVYSIPIGGSIHKQDYAIAGSGSTFIYGWCNEHFKHDMEQDETVEFIKTALSEAIKW 187
Query: 130 DGASGGVVRTVTINSEGVSR-KFYP 153
DG+SGGV+R V + +GV R FYP
Sbjct: 188 DGSSGGVIRMVVLTEKGVERLIFYP 212
>gi|356537782|ref|XP_003537404.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
Length = 124
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 63/63 (100%)
Query: 54 KNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKE 113
+NFL+TG+IVGGWDKYEGG+IYGVPLGGTI++QPFAIGGSGSSYLYGFFDQAWKEGMTK+
Sbjct: 60 ENFLETGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKD 119
Query: 114 EAE 116
EAE
Sbjct: 120 EAE 122
>gi|195029659|ref|XP_001987689.1| GH19825 [Drosophila grimshawi]
gi|193903689|gb|EDW02556.1| GH19825 [Drosophila grimshawi]
Length = 222
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L+ H Q + V AA+ R YN ++ L G+
Sbjct: 55 KIYCCRSG-SAADTQAIADIVAYSLNYHRNQTSKEPLVWEAASEFRNFCYNYRDSLLAGI 113
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG++Y VPLGG + + IGGSGSS++YGF + ++ GM KEE + V K
Sbjct: 114 IVAGWDEERGGQVYSVPLGGMLTRESCTIGGSGSSFIYGFVREHYRPGMPKEECIEFVKK 173
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
AV AI DG+SGGVVR I+ +G+ R+ +
Sbjct: 174 AVQHAIFHDGSSGGVVRIGIIDKDGIERRLF 204
>gi|344232173|gb|EGV64052.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
Length = 217
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 99/155 (63%), Gaps = 4/155 (2%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQT 59
I C R AAD+Q V+D V+Y+L + QL G+ T +V A++ + + YNNK+ L
Sbjct: 59 TIYCCRS-GSAADTQAVADMVKYYLQMYASQLPAGEKPTTEVVASVFQEVCYNNKDSLTA 117
Query: 60 GMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
G+I G+D+ GG +Y +PLGG++ +Q +AI GSGS ++YG+ ++ +K MTK+E +
Sbjct: 118 GIICAGYDEEVGGSVYSIPLGGSVHKQEYAIAGSGSGFVYGWCNENFKSDMTKDETVAFI 177
Query: 120 VKAVSLAIARDGASGGVVRTVTINSEGVSRK-FYP 153
A+S A+ DG+SGGVVR V + GV R FYP
Sbjct: 178 KTALSEAMKWDGSSGGVVRMVVLTKAGVERMIFYP 212
>gi|313230140|emb|CBY07844.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQP-ATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q ++ V+ L H I + + +V+ AA L + Y ++ G
Sbjct: 79 RIYCCRS-GSAADTQFIATAVKTRLEGHAIMIDEENPSVETAATLFKEYCYEYRDQFSAG 137
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
++V GWD EGG+++ +PLGG I Q AIGGSGS+++YG D +KEGM+KEE + V
Sbjct: 138 ILVAGWDPVEGGQVFSIPLGGMKIRQKVAIGGSGSTWIYGLVDNQFKEGMSKEETKAFVK 197
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
V+ A+ RD +SGGV+R TI +GV R G+ LP ++
Sbjct: 198 MCVAHAMDRDASSGGVIRLATITKDGVERDVVLGNELPKFY 238
>gi|157113425|ref|XP_001657823.1| proteasome subunit beta type 6,9 [Aedes aegypti]
gi|108877753|gb|EAT41978.1| AAEL006441-PA [Aedes aegypti]
Length = 228
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L+ H Q G+ V AA R YN ++ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVAYSLNYHENQTGEEPLVADAACEFRQYCYNYRDSLMAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG++Y VP+GG I Q IGGSGSSY+YGF + ++EGM K+E + V KA
Sbjct: 117 VAGFDNKNGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMPKDECVEFVKKA 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRK--FYPGD 155
V A+ DG+SGGV R I +GV R+ F P D
Sbjct: 177 VFHAMYHDGSSGGVCRIGIITKDGVERQVHFAPRD 211
>gi|221508035|gb|EEE33622.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii VEG]
Length = 245
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMI 62
C+ AAD+Q V+ V+ ++ Q+ +L G+ V+ AAN+ + L Y +K+ L G+I
Sbjct: 87 CVCRSGSAADTQAVTQIVKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLI 146
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+DK +GG+IY +PLGG ++ + GGSGS+++ + D +K+ MT++EA LV +
Sbjct: 147 VAGFDKVKGGQIYALPLGGALVPMQYTAGGSGSAFISAYMDANFKQNMTQQEAVNLVKNS 206
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
V+ AI+RDG+SGG+VR V I + + + G+ LP+
Sbjct: 207 VAYAISRDGSSGGMVRVVVITEDAMLEECVEGNKLPV 243
>gi|114326381|ref|NP_001041551.1| proteasome subunit beta type-9 [Canis lupus familiaris]
gi|55162808|emb|CAH63456.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Canis lupus familiaris]
Length = 209
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 86/128 (67%), Gaps = 1/128 (0%)
Query: 36 PATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGS 95
P V AAN+VR +SY + L +++ GWD+ +GG++YG +GG + QPFAIGGSGS
Sbjct: 83 PPLVLAAANVVRNISYKYREDLSAHLMIAGWDRRDGGQVYGT-MGGMLTRQPFAIGGSGS 141
Query: 96 SYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
+Y+YG+ D A+K GM+ EE A++LA+ RDG+SGGV+ VTI + GV + G+
Sbjct: 142 TYIYGYVDAAYKPGMSPEECRSFTTNAIALAMNRDGSSGGVIHLVTITAAGVDYQVILGN 201
Query: 156 TLPLWHEE 163
LP +++E
Sbjct: 202 ELPKFYDE 209
>gi|118346415|ref|XP_976941.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288453|gb|EAR86441.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 227
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 98/159 (61%), Gaps = 2/159 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I CLR AAD+QT+ YVRY+L H+++L + TVK AA L L Y ++ L +I
Sbjct: 66 IYCLRS-GSAADTQTLCSYVRYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQDNLSAAVI 124
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G D EG IY G+ I+Q AIGGSGS +++ + D ++ M E A++LV A
Sbjct: 125 VAGIDDNEGPSIYACQPSGSCIKQQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTA 184
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
++ A++RDG+SGG++R V I + V+R+F+ LP +H
Sbjct: 185 LAHAMSRDGSSGGIIRLVNITKDNVTREFFDHKDLP-YH 222
>gi|195121614|ref|XP_002005315.1| GI20414 [Drosophila mojavensis]
gi|193910383|gb|EDW09250.1| GI20414 [Drosophila mojavensis]
Length = 222
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q ++D V Y L+ H Q + V AA+ R YN ++ L G+
Sbjct: 55 KIYCCRSG-SAADTQAIADIVAYSLNYHRNQTNKEPLVWEAASEFRNFCYNYRDSLMAGI 113
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG++Y VPLGG + + IGGSGSSY+YGF + ++ GM EE V K
Sbjct: 114 IVAGWDEERGGQVYSVPLGGMLTHESCTIGGSGSSYIYGFVKEHYRLGMQMEECVDFVKK 173
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
AV AI DG+SGGVVR I +G+ R+ +
Sbjct: 174 AVQHAIYHDGSSGGVVRIGIITKDGIERRLF 204
>gi|66358282|ref|XP_626319.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46228005|gb|EAK88925.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 248
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 85/147 (57%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +S YVR + H ++ G+ VK A++ RL+SY NK L MI+ G D
Sbjct: 100 AADTQIISRYVRRIVQDHELETGEDTKVKSVASVARLISYQNKEHLLADMIIAGMDPNGE 159
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ +PLGGT+IE +AI GSGS Y+Y D + M +E + VS A+ RD
Sbjct: 160 FKVFRIPLGGTLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDS 219
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGG++R + IN GV PG+ +P
Sbjct: 220 SSGGIIRIIVINKSGVEEFVVPGEDVP 246
>gi|8117714|gb|AAF72737.1|AF097521_1 proteasome B type subunit [Cryptosporidium parvum]
Length = 210
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +S YVR + H ++ G+ VK A++ RL+SY NK L MI+ G D
Sbjct: 61 SAADTQIISRYVRRIVQDHELETGEDTKVKSVASVARLISYQNKEHLLADMIIAGMDPNG 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
K++ +PLGGT+IE +AI GSGS Y+Y D + M +E + VS A+ RD
Sbjct: 121 EFKVFRIPLGGTLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGG++R + IN GV PG+ +P
Sbjct: 181 SSSGGIIRIIVINKSGVEEFVVPGEDVP 208
>gi|327292072|ref|XP_003230744.1| PREDICTED: proteasome subunit beta type-9-like, partial [Anolis
carolinensis]
Length = 154
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Query: 30 TIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ + +P V AA LV+ +SY K L ++V GWD GG++YG LGG + QPFA
Sbjct: 22 SLNMDEPPLVLAAATLVKNISYKYKEELSAHLMVAGWDPRRGGQVYGT-LGGMLTRQPFA 80
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
IGGSGS+Y+YG+ D A+K GM + E Q A++LA+ RDG+SGGV+ VTI +G
Sbjct: 81 IGGSGSTYIYGYVDSAYKPGMDQVECRQFTKNAIALAMVRDGSSGGVIYLVTITKDGAKE 140
Query: 150 KFYPGDTLPLWHEE 163
+ GD +P +++E
Sbjct: 141 EVVVGDKIPQFYDE 154
>gi|312070446|ref|XP_003138150.1| proteasome A-type and B-type family protein [Loa loa]
Length = 223
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 88/138 (63%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SD V+Y++ +++ + TV +A + R Y ++ L ++V G+D EG
Sbjct: 44 AADTQAISDIVKYYIEVYSMMEEEDVTVGRSAQIFRNFLYKYRDSLSASVLVAGYDDVEG 103
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG + Q A GSGS+++ GF D WK GMT E+ +++V+ AV+LA RDG
Sbjct: 104 GQLYAIPLGGYVTRQRCAASGSGSTFVQGFLDSQWKSGMTAEKCKEIVLNAVALATIRDG 163
Query: 132 ASGGVVRTVTINSEGVSR 149
+SGGV+R I+ G R
Sbjct: 164 SSGGVIRLAVIDKTGTQR 181
>gi|301766946|ref|XP_002918903.1| PREDICTED: proteasome subunit beta type-6-like [Ailuropoda
melanoleuca]
Length = 120
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 75/110 (68%)
Query: 49 LSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
+ Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++E
Sbjct: 1 MCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYRE 60
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
GMTKEE Q A++LA+ RDG+SGGV+R I GV R+ GD +P
Sbjct: 61 GMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 110
>gi|94469190|gb|ABF18444.1| proteasome subunit beta type 6 precursor-like protein [Aedes
aegypti]
Length = 228
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L+ H Q G+ V AA R YN ++ L G+I
Sbjct: 58 IYCCRS-GSAADTQAIADIVAYSLNYHENQTGEEPLVADAACEFRQYCYNYRDSLMAGII 116
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG++Y VP+GG I Q IGGSGSSY+YGF + ++EGM ++E + V KA
Sbjct: 117 VAGFDNKNGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMPQDECVEFVKKA 176
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRK--FYPGD 155
V A+ DG+SGGV R I +GV R+ F P D
Sbjct: 177 VFHAMYHDGSSGGVCRIGIITKDGVERQVHFAPRD 211
>gi|393909340|gb|EFO25921.2| proteasome A-type and B-type family protein [Loa loa]
Length = 232
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 88/138 (63%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SD V+Y++ +++ + TV +A + R Y ++ L ++V G+D EG
Sbjct: 67 AADTQAISDIVKYYIEVYSMMEEEDVTVGRSAQIFRNFLYKYRDSLSASVLVAGYDDVEG 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG + Q A GSGS+++ GF D WK GMT E+ +++V+ AV+LA RDG
Sbjct: 127 GQLYAIPLGGYVTRQRCAASGSGSTFVQGFLDSQWKSGMTAEKCKEIVLNAVALATIRDG 186
Query: 132 ASGGVVRTVTINSEGVSR 149
+SGGV+R I+ G R
Sbjct: 187 SSGGVIRLAVIDKTGTQR 204
>gi|323336919|gb|EGA78176.1| Pre3p [Saccharomyces cerevisiae Vin13]
Length = 187
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 45 SAADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKN 103
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI D
Sbjct: 104 KGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWD 163
Query: 131 GASGGVVRTVTINS 144
G+SGGV+R V ++S
Sbjct: 164 GSSGGVIRMVVLDS 177
>gi|72389907|ref|XP_845248.1| proteasome beta-1 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|4218582|emb|CAA10283.1| proteasome beta-1 subunit [Trypanosoma brucei rhodesiense]
gi|62359956|gb|AAX80381.1| proteasome beta-1 subunit, putative [Trypanosoma brucei]
gi|70801783|gb|AAZ11689.1| proteasome beta-1 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328641|emb|CBH11619.1| proteasome beta-1 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 282
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ +L + + QP V AAN+ + L Y NK + G+I
Sbjct: 95 IYCCRS-GSAADTQALAEQTANYLESYETDISQPVNVATAANIFKKLCYMNKWNITAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG ++ +A+GGSGS +LY FFD +K GMTKEE + +A
Sbjct: 154 VAGYDPLNGGSVYSIPTGGACVKLDYALGGSGSVFLYSFFDANYKPGMTKEECIRFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTIN 143
V+ A +RDG+SGG++RT+ ++
Sbjct: 214 VAHAYSRDGSSGGLIRTIALH 234
>gi|195383886|ref|XP_002050656.1| GJ20086 [Drosophila virilis]
gi|194145453|gb|EDW61849.1| GJ20086 [Drosophila virilis]
Length = 222
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++D V Y L+ H Q + V AA+ R YN ++ L G+
Sbjct: 55 NIYCCRS-GSAADTQAIADIVAYSLNYHRNQTNKEPLVCEAASEFRNYCYNYRDSLLAGI 113
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD+ GG++Y VPLGG + + IGGSGSSY+YGF + ++ GM +E V K
Sbjct: 114 IVAGWDEERGGQVYSVPLGGMLTREGCTIGGSGSSYIYGFVKEHYRPGMPMDECIDFVKK 173
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
AV AI DG+SGGVVR I G+ R+ +
Sbjct: 174 AVQHAIYHDGSSGGVVRIGIITKNGMERRLF 204
>gi|194756194|ref|XP_001960364.1| GF13326 [Drosophila ananassae]
gi|190621662|gb|EDV37186.1| GF13326 [Drosophila ananassae]
Length = 229
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 89/141 (63%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L+ + Q + A V AA+ R YN ++ L G+IV G+D+ G
Sbjct: 64 AADTQAIADIVAYSLNYYENQTNKDALVHEAASEFRNFCYNYRDSLLAGIIVAGYDEERG 123
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +PLGG + + IGGSGSS++YGF + +++ M+KEE V KAV AI DG
Sbjct: 124 GQVYSIPLGGMLTREACTIGGSGSSFIYGFVREHYRQNMSKEECVDFVKKAVQHAIYHDG 183
Query: 132 ASGGVVRTVTINSEGVSRKFY 152
+SGGVVR I +G+ R+ +
Sbjct: 184 SSGGVVRIGIITKDGIERRLF 204
>gi|339238211|ref|XP_003380660.1| proteasome subunit beta type-6 [Trichinella spiralis]
gi|316976433|gb|EFV59730.1| proteasome subunit beta type-6 [Trichinella spiralis]
Length = 558
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C+R +AD+Q V+D +Y + + ++ V +AA + R + Y +N + G+I
Sbjct: 398 ICCMRS-GSSADTQAVADIAKYQISVYEMEHKCSIPVSIAAEIFRSICYRYRNDITAGII 456
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V GWD GG+IY +P+ G I++Q + GGSGS Y G+ D +K MT+EEA + KA
Sbjct: 457 VCGWDSVNGGQIYSIPISGMIMKQCWTAGGSGSVYAIGYLDTNFKPNMTEEEANNFIRKA 516
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
+++AI+RDG+SGG +R +I +G+ P D
Sbjct: 517 LAIAISRDGSSGGCIRLCSITEKGMEHSLIPAD 549
>gi|225709682|gb|ACO10687.1| Proteasome subunit beta type-6 precursor [Caligus rogercresseyi]
Length = 228
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 92/148 (62%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AA +Q ++ +RY L + + +G+ A V+ A+L + + Y ++ L G++VGGWDK +
Sbjct: 78 SAAVTQAIAKAIRYNLDMYNVMMGESAPVETVAHLFKSICYEYRDSLTAGILVGGWDKVK 137
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +P+GG + Q +A GGSGS YL+ F + + M KEE ++++++ ++ A+ D
Sbjct: 138 GGQVYSIPMGGMCVRQGYASGGSGSVYLHAFMSANYSKDMNKEECKKMLIRGIASAVEFD 197
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
G+SGG R +I +G+ R D LP
Sbjct: 198 GSSGGSCRWASITKDGIERGISLYDELP 225
>gi|67621564|ref|XP_667771.1| proteasome B type subunit [Cryptosporidium hominis TU502]
gi|54658945|gb|EAL37551.1| proteasome B type subunit [Cryptosporidium hominis]
Length = 210
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q +S YVR + H ++ G+ VK A++ RL+SY NK L MI+ G D
Sbjct: 61 SAADTQIISRYVRRIVQDHELETGEDTKVKSVASVARLISYQNKEHLLADMIIAGMDPNG 120
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
K++ +PLGGT+IE +AI GSGS Y+Y D + M +E + VS A+ RD
Sbjct: 121 EFKVFRIPLGGTLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRD 180
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLP 158
+SGG++R + I+ GV PG+ +P
Sbjct: 181 SSSGGIIRIIVIDKSGVEEFVVPGEDVP 208
>gi|402898370|ref|XP_003912196.1| PREDICTED: proteasome subunit beta type-6 isoform 5 [Papio anubis]
Length = 213
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSL 125
A S
Sbjct: 193 AFSF 196
>gi|323347907|gb|EGA82167.1| Pre3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 187
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D
Sbjct: 45 SAADTQAIADIVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKN 103
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G++Y +PLGG++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI D
Sbjct: 104 KGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWD 163
Query: 131 GASGGVVRTVTINS 144
G+SGGV+R V + S
Sbjct: 164 GSSGGVIRMVVLXS 177
>gi|448106870|ref|XP_004200850.1| Piso0_003460 [Millerozyma farinosa CBS 7064]
gi|448109904|ref|XP_004201481.1| Piso0_003460 [Millerozyma farinosa CBS 7064]
gi|359382272|emb|CCE81109.1| Piso0_003460 [Millerozyma farinosa CBS 7064]
gi|359383037|emb|CCE80344.1| Piso0_003460 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q V+D V+Y L + Q+ G+ T K+AA++ + + YNNK+ L G+I G+DK+
Sbjct: 68 AADTQAVADIVKYHLQMYASQMPDGEKPTTKIAASVFQEICYNNKDQLTAGIICAGYDKH 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y +P+GG++ + +AI GSGS+++YG+ ++ +K M K E + + A+S AI
Sbjct: 128 NKGTVYQIPIGGSVHQSDYAIAGSGSTFIYGWCNENYKPNMEKNECIEFIKTALSEAIKW 187
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGD 155
DG+SGGV+R V + +GV R + D
Sbjct: 188 DGSSGGVIRMVVLTEKGVERLLFLPD 213
>gi|403279808|ref|XP_003931436.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 213
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSL 125
A S
Sbjct: 193 AYSF 196
>gi|441662341|ref|XP_004091591.1| PREDICTED: proteasome subunit beta type-6 [Nomascus leucogenys]
Length = 213
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 HIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSL 125
A S
Sbjct: 193 AFSF 196
>gi|47184838|emb|CAF87014.1| unnamed protein product [Tetraodon nigroviridis]
Length = 131
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
I+L +P V+ AANL + Y + L G++V GWD+ GG++Y VP+GG + QP A+
Sbjct: 1 IELDEPPLVETAANLFKDSCYRYREELTAGILVAGWDRRRGGQVYSVPIGGMMARQPVAV 60
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
GGSGSSY+YGF D +K G++KE+ +L A+SLA+ RDG+SGGV+R +I+ EGV R+
Sbjct: 61 GGSGSSYIYGFVDSNYKPGLSKEQCLELAAAALSLAMERDGSSGGVIRLASISEEGVERR 120
Query: 151 FYPGDTLP 158
G+ LP
Sbjct: 121 VILGNQLP 128
>gi|397477778|ref|XP_003810246.1| PREDICTED: proteasome subunit beta type-6 isoform 4 [Pan paniscus]
gi|410050913|ref|XP_003952995.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
gi|426383649|ref|XP_004058391.1| PREDICTED: proteasome subunit beta type-6 isoform 3 [Gorilla
gorilla gorilla]
Length = 213
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 AVSL 125
A S
Sbjct: 193 AFSF 196
>gi|170594089|ref|XP_001901796.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158590740|gb|EDP29355.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 209
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 88/144 (61%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SD V+Y++ +++ + TV +A + R Y ++ L ++V G+D EG
Sbjct: 44 AADTQAISDIVKYYIEVYSMMEEEEVTVGRSAQIFRNFLYKYRDSLSASVLVAGYDDIEG 103
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG + Q A G GS+++ GF D WK GMT E+ ++LV+ AV+LA RDG
Sbjct: 104 GQLYAIPMGGYVTRQRCAASGRGSTFVQGFLDSQWKPGMTAEKCKELVLNAVALATIRDG 163
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGV+R I+ G R D
Sbjct: 164 SSGGVIRLAVIDKTGTKRTLIRPD 187
>gi|308799175|ref|XP_003074368.1| proteasome subunit Y (ISS) [Ostreococcus tauri]
gi|116000539|emb|CAL50219.1| proteasome subunit Y (ISS) [Ostreococcus tauri]
Length = 240
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-----LQTGMIVGGW 66
AAD++ + +VR + + ++ G+PA VK A + ++Y NK L IVGGW
Sbjct: 60 AADTEALGGFVRRVVEEREVEHGEPADVKTVATIATKIAYQNKGMNQGRGLSAYTIVGGW 119
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK G ++Y GG ++++ + GSGS+Y++GF D W+EGMT+EE E V +A++LA
Sbjct: 120 DKRNGPQVYASTAGGNMVKERWTTDGSGSTYIWGFLDDGWREGMTREECEAFVARAIALA 179
Query: 127 IARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQ 167
++ DG+SGG +R T++ G++R F G+ +P EL PQ
Sbjct: 180 MSVDGSSGGCIRLNTVDKSGITRTFIQGNDIPPVLGEL-PQ 219
>gi|299470598|emb|CBN80220.1| proteasome subunit beta type 6 [Ectocarpus siliculosus]
Length = 241
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
+AD+Q V+ + L + + G+ TV+ AA R L Y NK+ L G+I GWD E
Sbjct: 70 SSADTQFVAGVIEAKLEAYRTEFGRYPTVRAAATATRNLCYANKDQLSAGIICAGWDSRE 129
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG ++ VP GG+++EQPFA+ GSG+ Y G+ D + G+ ++E V A+ +A+ RD
Sbjct: 130 GGSVFSVPQGGSLLEQPFAVSGSGAVYALGYCDDNLRPGLGRDECVSHVRTALEMAVRRD 189
Query: 131 GASGGVVRTVTINSEGVSR-KFYPGDT 156
GASGGV+R ++++GV R PG T
Sbjct: 190 GASGGVIRLCVVSADGVERWTVVPGMT 216
>gi|47216873|emb|CAG11680.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H + + V AA+LV+ +SY K L +IV GWD+ +G
Sbjct: 65 AADAQTIAEIVNYQLDVH--RSARTPKVGSAASLVKNISYKYKEELSAHLIVAGWDRRKG 122
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQL-VVKAVSLAIARD 130
G+++ L G + QPFA+GGSGSSY+YGF D ++ GM+K+EA+Q A++LA+ RD
Sbjct: 123 GQVFAT-LNGLLARQPFAVGGSGSSYVYGFVDAEFRRGMSKQEAQQAGSSTALALAMNRD 181
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G+SGGV VTI+ K G+ LP + ++
Sbjct: 182 GSSGGVAYVVTIDENRTEEKVVLGNELPTFFDQ 214
>gi|410979657|ref|XP_003996198.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Felis catus]
Length = 213
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 A 122
A
Sbjct: 193 A 193
>gi|71666388|ref|XP_820153.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
gi|70885487|gb|EAN98302.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ +L + I +P V AAN+ + L Y NK + G+I
Sbjct: 95 IYCCRS-GSAADTQALAEQTANYLESYEIDTSKPVNVTTAANIFKKLCYMNKWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+KEE +A
Sbjct: 154 VAGYDPLNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTIN 143
V+ A +RDG+SGG++RT+ ++
Sbjct: 214 VAHAYSRDGSSGGLIRTIALH 234
>gi|407844517|gb|EKG01987.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ +L + I +P V AAN+ + L Y NK + G+I
Sbjct: 95 IYCCRS-GSAADTQALAEQTANYLESYEIDTSKPVNVTTAANIFKKLCYMNKWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+KEE +A
Sbjct: 154 VAGYDPLNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTIN 143
V+ A +RDG+SGG++RT+ ++
Sbjct: 214 VAHAYSRDGSSGGLIRTIALH 234
>gi|407405474|gb|EKF30441.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 284
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 85/132 (64%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +++ +L + +PA V AAN+ + L Y NK + G+IV G+D G
Sbjct: 103 AADTQALAEQTANYLESYETDTSKPANVTTAANIFKKLCYMNKWNISAGIIVAGYDPLNG 162
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+KEE +AV+ A +RDG
Sbjct: 163 GSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRAVAHAYSRDG 222
Query: 132 ASGGVVRTVTIN 143
+SGG++RT+ ++
Sbjct: 223 SSGGLIRTIALH 234
>gi|342181371|emb|CCC90850.1| putative proteasome beta-1 subunit [Trypanosoma congolense IL3000]
Length = 282
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 12/178 (6%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ +L + +P V AAN+ + L Y N+ + G+I
Sbjct: 95 IYCCRS-GSAADTQALAELTANYLEGYEADTSRPVNVASAANIFKKLCYMNRWAISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GMTK+E +L +A
Sbjct: 154 VAGYDSVNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMTKDECIRLCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE-----ELEPQNSLLDMMN 175
V+ A +RDG+SGG++RT+ ++ EG P DT W E +P+ + L + N
Sbjct: 214 VAHAYSRDGSSGGLIRTIVLH-EGE-----PEDTTVPWTRAPYCMERDPKYAELCVQN 265
>gi|145521580|ref|XP_001446645.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414123|emb|CAK79248.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I CLR AAD+Q ++ +VRY++ H +LG+ V AANL R Y K+ + +
Sbjct: 57 RIFCLRS-GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMSASI 115
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IV GWD Y+G +I+ +PLGG++IEQ ++IGGSGS++++GF D ++ + + + V+
Sbjct: 116 IVAGWDPYKGPQIFTLPLGGSVIEQKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLH 175
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
AV+ A+ RDG+SGG++R N + Y
Sbjct: 176 AVAHAMFRDGSSGGIIRLPQCNQRQNRTRIY 206
>gi|394953893|ref|NP_001257410.1| proteasome subunit beta type-6 isoform 2 proprotein [Homo sapiens]
Length = 213
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
I C R AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+
Sbjct: 74 RIFCCRS-GSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGI 132
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ GWD EGG++Y VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q
Sbjct: 133 IIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTAN 192
Query: 122 A 122
A
Sbjct: 193 A 193
>gi|358336412|dbj|GAA54927.1| 20S proteasome subunit beta 1 [Clonorchis sinensis]
Length = 145
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 88/143 (61%), Gaps = 12/143 (8%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK------------IYGVP 78
+Q+ + TV AA R L Y+ ++ L G+ V GWD+ GG+ IY +P
Sbjct: 1 MQMNKDPTVLEAAVTCRSLCYSYRDDLSAGLFVAGWDESGGGQVVLCYSFILYFQIYSIP 60
Query: 79 LGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVR 138
LGG +++QP IGGSGS+Y+YG+FD+ +++ MTKEE V V+LAI RDG+SGG +R
Sbjct: 61 LGGMLLKQPAVIGGSGSTYIYGYFDREFRKDMTKEECVNFVSTGVALAINRDGSSGGCIR 120
Query: 139 TVTINSEGVSRKFYPGDTLPLWH 161
I+ +GV R+ G+ +P++
Sbjct: 121 LAIISKDGVERRLIKGNDVPMFK 143
>gi|401827855|ref|XP_003888220.1| proteasome beta type-6 subunit [Encephalitozoon hellem ATCC 50504]
gi|392999420|gb|AFM99239.1| proteasome beta type-6 subunit [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+QT+S+Y++ +L ++ V AA L + Y N + L G+IV G+D E
Sbjct: 57 SAADTQTISEYLKMYLKMYSQLENAAPLVHRAATLASKIIYENPSLL-AGLIVAGYD--E 113
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
+I+ + LGGT++E + IGGSGS+++Y + D W+ GM+ EE + + AV+ AI+RD
Sbjct: 114 KPRIFNISLGGTLMECDWTIGGSGSAFIYSYCDMNWRSGMSLEEGIRFIKDAVTCAISRD 173
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGG +R I +GV R FYPGD +
Sbjct: 174 NASGGCIRMSAITRDGVQRYFYPGDKV 200
>gi|300708256|ref|XP_002996311.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
gi|239605602|gb|EEQ82640.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
Length = 230
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C R AAD+Q ++ YV+ + + + + +VK AA + + + Y N + L G+
Sbjct: 77 NIYCCRS-GSAADTQAIAQYVKEVVQRSSFIDKEIPSVKKAAMIAKEIIYKNPSLL-AGL 134
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I+ G+D KIY + LGGTI E + IGGSGS+Y+YG D +K+ MT EEA + V +
Sbjct: 135 IIAGYDT--SPKIYNISLGGTITEADWQIGGSGSAYIYGLCDTLYKDNMTLEEAIEFVKQ 192
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTL 157
A++ AI RD ASGG +R +I+ EGV R FY G+ +
Sbjct: 193 AITCAIRRDNASGGSIRMASISREGVKRYFYSGEKI 228
>gi|412988611|emb|CCO17947.1| predicted protein [Bathycoccus prasinos]
Length = 245
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 12 AADSQTVSDYVRYFLHQHTIQL--GQPATVKVAANLVRLLSYNNKNFLQ-TGM----IVG 64
AAD++ V+ +VR+ Q I+L G+ VK A ++ ++Y NKN TG+ I
Sbjct: 63 AADTEAVAGFVRHHCAQREIELAHGETMEVKQVARILTKINYENKNANNGTGLGCYAIAA 122
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
GWD+ G ++Y GG +I+ + GSGS+Y++GF D +KE MT+EE E+ V+KA++
Sbjct: 123 GWDEKFGAQVYSCTAGGNMIKTSWTTDGSGSTYIWGFLDSEFKERMTREECEKYVLKALT 182
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
LA+A D +SGG R T+N +G R+F GD L
Sbjct: 183 LAMAVDSSSGGCARLCTVNKDGCFRRFIKGDELE 216
>gi|340053992|emb|CCC48286.1| putative proteasome beta-1 subunit [Trypanosoma vivax Y486]
Length = 282
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ +L H + + V AAN+ + L Y NK + G+I
Sbjct: 95 IYCCRS-GSAADTQALAERTANYLESHGTDIAREINVATAANIFKKLCYMNKWNITAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GMTKEE + A
Sbjct: 154 VAGYDSLNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMTKEECIRFCQTA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNV 176
V+ A +RDG+SGG++RT+ ++ P P E+ +P+ L + N+
Sbjct: 214 VAHAYSRDGSSGGLIRTIALHQGEPEDLTVPWTATPYCMEK-DPKYRTLAVQNL 266
>gi|194882671|ref|XP_001975434.1| GG22308 [Drosophila erecta]
gi|190658621|gb|EDV55834.1| GG22308 [Drosophila erecta]
Length = 224
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD+
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKEALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M EE V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTRESCTIGGSGSSFIYGFVREHYRPNMQLEECVSFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|71663121|ref|XP_818557.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
gi|70883816|gb|EAN96706.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 87/141 (61%), Gaps = 1/141 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ +L + +P V AAN+ + L Y NK + G+I
Sbjct: 95 IYCCRS-GSAADTQALAEQTANYLESYETDTSKPVNVTTAANIFKKLCYMNKWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+KEE +A
Sbjct: 154 VAGYDPLNGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTIN 143
V+ A +RDG+SGG++RT+ ++
Sbjct: 214 VAHAYSRDGSSGGLIRTIALH 234
>gi|398011837|ref|XP_003859113.1| unnamed protein product [Leishmania donovani]
gi|322497326|emb|CBZ32401.1| unnamed protein product [Leishmania donovani]
Length = 283
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ V +L + +G V AANL + Y N+ + G+I
Sbjct: 95 IYCCRS-GSAADTQALAERVSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+K E +A
Sbjct: 154 VAGYDPINGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMSKSECVAFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
V+ A +RDG+SGG++RT+T+++E P P E+
Sbjct: 214 VAHAYSRDGSSGGLIRTITLDAEEAEDLTVPWKRSPYCMEK 254
>gi|154333595|ref|XP_001563054.1| putative proteasome beta-1 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060064|emb|CAM37377.1| putative proteasome beta-1 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 283
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ V +L + +G V AANL + Y N+ + G+I
Sbjct: 95 IYCCRS-GSAADTQALAERVSNYLGSYQTDVGTEVNVATAANLFHKMCYMNRWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K M+K E +A
Sbjct: 154 VAGYDPINGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPDMSKSECVAFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
V+ A +RDG+SGG++RT+T+++ + P +T P E+
Sbjct: 214 VAHAFSRDGSSGGLIRTITLDAGEPEHQTIPWNTAPYCMEK 254
>gi|195488383|ref|XP_002092291.1| GE14105 [Drosophila yakuba]
gi|194178392|gb|EDW92003.1| GE14105 [Drosophila yakuba]
Length = 224
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 84/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKEALVFEAASEFRNYCYSYRESLLAGIIVAGWDAQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M EE V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTRESCTIGGSGSSFIYGFVREHYRPNMQLEECVSFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|339897076|ref|XP_001463938.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
gi|321399047|emb|CAM66312.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
Length = 283
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ V +L + +G V AANL + Y N+ + G+I
Sbjct: 95 IYCCRS-GSAADTQALAERVSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+K E +A
Sbjct: 154 VAGYDPINGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMSKGECVAFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
V+ A +RDG+SGG++RT+T+++E P P E+
Sbjct: 214 VAHAYSRDGSSGGLIRTITLDAEEAEDLTVPWKRSPYCMEK 254
>gi|24653999|ref|NP_652031.2| proteasome beta1 subunit [Drosophila melanogaster]
gi|7303007|gb|AAF58077.1| proteasome beta1 subunit [Drosophila melanogaster]
gi|116806936|emb|CAL26894.1| CG8392 [Drosophila melanogaster]
gi|116806938|emb|CAL26895.1| CG8392 [Drosophila melanogaster]
gi|116806940|emb|CAL26896.1| CG8392 [Drosophila melanogaster]
gi|116806942|emb|CAL26897.1| CG8392 [Drosophila melanogaster]
gi|116806944|emb|CAL26898.1| CG8392 [Drosophila melanogaster]
gi|116806946|emb|CAL26899.1| CG8392 [Drosophila melanogaster]
gi|116806948|emb|CAL26900.1| CG8392 [Drosophila melanogaster]
gi|116806950|emb|CAL26901.1| CG8392 [Drosophila melanogaster]
gi|116806952|emb|CAL26902.1| CG8392 [Drosophila melanogaster]
gi|116806954|emb|CAL26903.1| CG8392 [Drosophila melanogaster]
gi|116806956|emb|CAL26904.1| CG8392 [Drosophila melanogaster]
gi|201065949|gb|ACH92384.1| FI07228p [Drosophila melanogaster]
gi|223967797|emb|CAR93629.1| CG8392-PA [Drosophila melanogaster]
gi|223967799|emb|CAR93630.1| CG8392-PA [Drosophila melanogaster]
gi|223967801|emb|CAR93631.1| CG8392-PA [Drosophila melanogaster]
gi|223967803|emb|CAR93632.1| CG8392-PA [Drosophila melanogaster]
gi|223967805|emb|CAR93633.1| CG8392-PA [Drosophila melanogaster]
gi|223967807|emb|CAR93634.1| CG8392-PA [Drosophila melanogaster]
gi|223967809|emb|CAR93635.1| CG8392-PA [Drosophila melanogaster]
gi|223967811|emb|CAR93636.1| CG8392-PA [Drosophila melanogaster]
gi|223967813|emb|CAR93637.1| CG8392-PA [Drosophila melanogaster]
gi|223967815|emb|CAR93638.1| CG8392-PA [Drosophila melanogaster]
gi|223967817|emb|CAR93639.1| CG8392-PA [Drosophila melanogaster]
gi|223967819|emb|CAR93640.1| CG8392-PA [Drosophila melanogaster]
Length = 224
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD+
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M E+ V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|195564145|ref|XP_002077569.1| GD16019 [Drosophila simulans]
gi|194202687|gb|EDX16263.1| GD16019 [Drosophila simulans]
Length = 206
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD+
Sbjct: 45 SAADTQAIADIVAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQR 104
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M E+ V KAV AI D
Sbjct: 105 GGQVYSIPLGGMLTREACTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHD 164
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 165 GSSGGVVRVGIITKDGIERRIF 186
>gi|195334769|ref|XP_002034049.1| GM20098 [Drosophila sechellia]
gi|194126019|gb|EDW48062.1| GM20098 [Drosophila sechellia]
Length = 224
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD+
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M E+ V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTREACTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|396082339|gb|AFN83949.1| proteasome subunit beta type-6 [Encephalitozoon romaleae SJ-2008]
Length = 202
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
+AD+Q +S+Y++ +L+ ++ +V AA L + Y N L G+IV G+D +
Sbjct: 57 SSADTQMISEYLKMYLNMYSRLESSVPSVHRAATLASKIIYENPTLL-AGLIVAGYD--D 113
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
+++ + LGG+++E +AIGGSGS+++YG+ D W+ GM+ EE + + AVS AI RD
Sbjct: 114 KPRVFNISLGGSLMECDWAIGGSGSAFIYGYCDMNWRSGMSLEEGIKFIKDAVSSAIRRD 173
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGG +R I+ +GV R FYPGD +
Sbjct: 174 NASGGCIRMSAISRDGVQRYFYPGDKV 200
>gi|16768432|gb|AAL28435.1| GM04535p [Drosophila melanogaster]
Length = 224
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD+
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M E+ V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|17945936|gb|AAL49013.1| RE44901p [Drosophila melanogaster]
Length = 224
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 85/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y+ + L G+IV GWD+
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M E+ V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|157865801|ref|XP_001681607.1| putative proteasome beta-1 subunit [Leishmania major strain
Friedlin]
gi|68124905|emb|CAJ02350.1| putative proteasome beta-1 subunit [Leishmania major strain
Friedlin]
Length = 283
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ V +L + +G V AANL + Y N+ + G+I
Sbjct: 95 IYCCRS-GSAADTQALAERVSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K GM+K E +A
Sbjct: 154 VAGYDPINGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPGMSKSECVAFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
V+ A +RDG+SGG++RT+T++++ P P E+
Sbjct: 214 VAHAYSRDGSSGGLIRTITLDADEAEDLTVPWKRSPYCMEK 254
>gi|303391190|ref|XP_003073825.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
gi|303302973|gb|ADM12465.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
Length = 202
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 3/147 (2%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
+AD+Q +S+Y++ +L ++ V+ AA L + Y N + L G+IV G+D +
Sbjct: 57 SSADTQMISEYLKMYLTLYSHLESSIPLVQRAATLASKIIYENPSLL-AGLIVAGYD--D 113
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
+I+ + LGGT++E +AIGGSGS+++YG+ D WK GM+ EE + AVS AI RD
Sbjct: 114 KPRIFNISLGGTLVECDWAIGGSGSAFIYGYCDVNWKNGMSLEEGIGFIKNAVSCAINRD 173
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGG +R I+ GV R FYPGD +
Sbjct: 174 NASGGCIRMSAISRNGVQRYFYPGDKV 200
>gi|116806958|emb|CAL26905.1| CG8392 [Drosophila simulans]
Length = 224
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 84/142 (59%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++D V Y L+ H Q + A V AA+ R Y + L G+IV GWD+
Sbjct: 63 SAADTQAIADIVAYSLNYHENQTNKDALVFEAASEFRNYCYGYRESLLAGIIVAGWDEQR 122
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y +PLGG + + IGGSGSS++YGF + ++ M E+ V KAV AI D
Sbjct: 123 GGQVYSIPLGGMLTREACTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHD 182
Query: 131 GASGGVVRTVTINSEGVSRKFY 152
G+SGGVVR I +G+ R+ +
Sbjct: 183 GSSGGVVRIGIITKDGIERRIF 204
>gi|449329908|gb|AGE96176.1| proteasome b-type subunit delta chain [Encephalitozoon cuniculi]
Length = 203
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 3/146 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
+AD+Q +S Y+R +L ++ V+ AA L + Y N + L G+IV G+D +
Sbjct: 59 SADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD--DK 115
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + LGG++ E+ +AIGGSGS+++YG+ D W+ GM+ EE + V AVS AI RD
Sbjct: 116 PRVFNISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIKFVRNAVSCAINRDN 175
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGG +R I+ GV R FYPGD +
Sbjct: 176 ASGGCIRMSAISRTGVQRYFYPGDKV 201
>gi|19074754|ref|NP_586260.1| PROTEASOME B-TYPE SUBUNIT DELTA CHAIN [Encephalitozoon cuniculi
GB-M1]
gi|74664171|sp|Q8SR11.1|PSB1_ENCCU RecName: Full=Probable proteasome subunit beta type-1; AltName:
Full=26S proteasome beta-type subunit PRE3; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE3;
Flags: Precursor
gi|19069396|emb|CAD25864.1| PROTEASOME B-TYPE SUBUNIT DELTA CHAIN [Encephalitozoon cuniculi
GB-M1]
Length = 203
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 3/146 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
+AD+Q +S Y+R +L ++ V+ AA L + Y N + L G+IV G+D +
Sbjct: 59 SADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD--DK 115
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + LGG++ E+ +AIGGSGS+++YG+ D W+ GM+ EE + V AVS AI RD
Sbjct: 116 PRVFNISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDN 175
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTL 157
ASGG +R I+ GV R FYPGD +
Sbjct: 176 ASGGCIRMSAISRTGVQRYFYPGDKV 201
>gi|401417224|ref|XP_003873105.1| putative proteasome beta-1 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489333|emb|CBZ24592.1| putative proteasome beta-1 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 283
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q +++ V +L + +G V AANL + Y N+ + G+I
Sbjct: 95 IYCCRS-GSAADTQALAERVSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGII 153
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
V G+D GG +Y +P GG+ ++ +A+GGSGS +LY FFD +K M+K E +A
Sbjct: 154 VAGYDLINGGSVYSIPSGGSCVKLDYALGGSGSIFLYSFFDANYKPDMSKSECVAFCQRA 213
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMN 175
V+ A +RDG+SGG++RT+T++++ + P + P E+ +P+ + ++N
Sbjct: 214 VAHAYSRDGSSGGLIRTITLDADEPEDQTVPWNRSPYCMEK-DPKYQVQAVLN 265
>gi|164660592|ref|XP_001731419.1| hypothetical protein MGL_1602 [Malassezia globosa CBS 7966]
gi|159105319|gb|EDP44205.1| hypothetical protein MGL_1602 [Malassezia globosa CBS 7966]
Length = 159
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q ++D V Y L +++ Q VAANL + L Y NK+ L G+I
Sbjct: 38 IYCCRS-GSAADTQALADVVTYHLQLYSVMQEQQPPTAVAANLFQELIYQNKDRLTAGII 96
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
V GWDK+ GG+++ VPLGG + EQP+AIGGSGS+Y+YG+ D W+EG +E+ + V
Sbjct: 97 VAGWDKFHGGRVFNVPLGGGVFEQPWAIGGSGSAYIYGYCDSTWREGWNQEQTLEFV 153
>gi|349805113|gb|AEQ18029.1| putative proteasome beta 6 subunit [Hymenochirus curtipes]
Length = 111
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 70/98 (71%)
Query: 36 PATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGS 95
P V AANL + + Y + L G+IV GWDK +GG++Y VP+GG ++ QPF+IGGSGS
Sbjct: 14 PPLVHTAANLFKEMCYRYREDLMAGIIVAGWDKRKGGQVYSVPMGGMMVHQPFSIGGSGS 73
Query: 96 SYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 133
SY+YGF D +++GMTK+E + A++LA+ RDG+S
Sbjct: 74 SYIYGFVDSTYRQGMTKDECMKFAANALALAMERDGSS 111
>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
Length = 239
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D +Y + +T+ +P T+ ++ + R YN + L ++V GWD+ G
Sbjct: 72 AADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDEELG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG + Q GSGS+++ GF D W+ +T EE + +V +AV LA RDG
Sbjct: 132 GQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGVVR IN G + + D
Sbjct: 192 SSGGVVRLAVINKAGSQFELFRPD 215
>gi|225556132|gb|EEH04422.1| proteasome component [Ajellomyces capsulatus G186AR]
Length = 216
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 95/162 (58%), Gaps = 18/162 (11%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM---------- 61
AAD+Q V+D V Y L + + + T + AA L + L Y+NK+ L+ G+
Sbjct: 46 AADTQAVADIVSYHLGMYGVVNQERPTTQTAAALFQELCYDNKDILRQGIPSRPRLLHQL 105
Query: 62 --------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKE 113
I+ G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+E
Sbjct: 106 LSYIIAGIIIAGYDARHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEE 165
Query: 114 EAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
E + V ++ AI DG+SGGV+R V + +G R Y D
Sbjct: 166 EGIEFVKNSLQEAIKWDGSSGGVIRMVVLTEKGAVRHLYLPD 207
>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
Length = 242
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D +Y + +T+ +P T+ ++ + R YN + L ++V GWD G
Sbjct: 75 AADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDSELG 134
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG + Q GSGS+++ GF D W+ +T EE + +V +AV LA RDG
Sbjct: 135 GQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLEECKAIVKQAVGLATFRDG 194
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGVVR I+ G + + D
Sbjct: 195 SSGGVVRLAVIDKTGSKFELFRPD 218
>gi|410958880|ref|XP_003986041.1| PREDICTED: proteasome subunit beta type-9 [Felis catus]
Length = 201
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 91/153 (59%), Gaps = 9/153 (5%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q + D Y L H ++L + V AAN+VR +SY + L +IV GWD+ +
Sbjct: 58 SAADAQAMVDMAAYQLELHGLELEECPLVLAAANVVRNISYKYREDLSAHLIVAGWDQRD 117
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++YG LGG + QPFAIGGSGS+Y+YG+ D A+K GM+ EE K D
Sbjct: 118 GGQVYGT-LGGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRCFTTK--------D 168
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
G SGGV+ TI + GV + G+ LP ++++
Sbjct: 169 GTSGGVIYLATITAAGVDHQVILGNELPKFYDK 201
>gi|401883351|gb|EJT47564.1| 20S proteasome beta-type subunit, Pre3p [Trichosporon asahii var.
asahii CBS 2479]
Length = 211
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 3 IDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMI 62
I C R AAD+Q V+D V + +T G+ V A L L Y NK+ L G+I
Sbjct: 49 IYCCRS-GSAADTQAVADIVHHHAQLYTQIYGEAPPVATIAALFEKLCYENKDQLSAGII 107
Query: 63 VGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKA 122
VGGWDK GG +Y +PLG +QP+AIGGSGS+Y+YG+ D ++EG +E+ + V
Sbjct: 108 VGGWDKENGGSVYNIPLGVGTFKQPWAIGGSGSTYVYGYCDATYREGWNEEQTIEFV--- 164
Query: 123 VSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
+ G +R + + V R F PG+ LP + E E
Sbjct: 165 ---------KNRGCIRMCVLTKDKVERIFIPGNELPRFWEGKE 198
>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
Length = 239
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D +Y + +T+ +P T+ ++ + R YN + L ++V GWD G
Sbjct: 72 AADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDSELG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG + Q GSGS+++ GF D W+ +T +E + +V +AV LA RDG
Sbjct: 132 GQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGVVR I+ G + + D
Sbjct: 192 SSGGVVRLAVIDKTGSKFELFRPD 215
>gi|209734998|gb|ACI68368.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 199
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%)
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
I GWD+ +G ++Y V LGG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q
Sbjct: 98 ITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATN 157
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
A++LA+ RD SGGV V I EGV PGD LP +H+E
Sbjct: 158 ALALAMGRDNVSGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 199
>gi|294877016|ref|XP_002767869.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
gi|239869810|gb|EER00587.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
Length = 212
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 12 AADSQTVSDYVRYFLHQHT--IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q +S V+YFL+ H + L + VK AANL+RLL+YNNK +L G+IV GWD+
Sbjct: 103 AADTQFLSSKVKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQT 162
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEE 114
EG ++Y +PLGGTII+Q A GGSGS+Y+ G D ++ M+ E
Sbjct: 163 EGPQVYSIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSTGE 207
>gi|402467038|gb|EJW02410.1| hypothetical protein EDEG_03164 [Edhazardia aedis USNM 41457]
Length = 204
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+ +++ + +L + TVK+AA + L Y+ +FL GMIV G+D++
Sbjct: 59 SAADTMYIANLITMYLEKQEYLYNTKPTVKLAATYCQELIYSYPDFLA-GMIVAGFDEF- 116
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + LGGTI++ +AIGGSGS +LY FFD+ ++ T E+ V KAVS AI RD
Sbjct: 117 GPSVYTITLGGTIVKGDYAIGGSGSIHLYSFFDENFRNDFTDEQGLAFVKKAVSAAIKRD 176
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTL 157
SGG VR I + + R F PG+ L
Sbjct: 177 NFSGGCVRMARITNNNLERYFIPGNEL 203
>gi|341897914|gb|EGT53849.1| CBN-PBS-1 protein [Caenorhabditis brenneri]
Length = 239
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D +Y + +T+ +P T+ ++ + R YN + L ++V GWD G
Sbjct: 72 AADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDAELG 131
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y +P+GG + Q GSGS+++ GF D W+ +T +E + +V +AV LA RDG
Sbjct: 132 GQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDG 191
Query: 132 ASGGVVRTVTINSEGVSRKFYPGD 155
+SGGVVR I+ G + + D
Sbjct: 192 SSGGVVRLAVIDKTGSKFELFRPD 215
>gi|340504857|gb|EGR31264.1| proteasome subunit y, putative [Ichthyophthirius multifiliis]
Length = 226
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
CLR AAD+QT+ YVRY++ HT++ G+ VK AA L + + Y K+ L +IV
Sbjct: 70 CLRS-GSAADTQTLCTYVRYYIDVHTVESGRRPAVKTAAKLFQNMIYEYKDNLSAAVIVA 128
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G D G +IY V G+I +Q A GGSGS Y+YGF D +KE M+ +EA++ + +A+S
Sbjct: 129 GVDDLLGPQIYNVNPNGSIFKQQCATGGSGSGYIYGFVDSNFKENMSLDEAKKFIKQAIS 188
Query: 125 LAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
L+++RDG+SGG++R + I E V R+F LP
Sbjct: 189 LSMSRDGSSGGIMRLMNITKEKVEREFVDLKDLP 222
>gi|195028618|ref|XP_001987173.1| GH21772 [Drosophila grimshawi]
gi|193903173|gb|EDW02040.1| GH21772 [Drosophila grimshawi]
Length = 225
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AA +Q ++D V L+ + LG+PA V+ AA R Y + + GMIV GWD+ +G
Sbjct: 62 AAQTQELADNVASTLYSLELALGEPALVRDAAVQFRNRIYAARKTMLAGMIVAGWDQRQG 121
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++YGVP+ G ++ +P + GSGS+++ G+ ++ GM ++EA L AV +AI D
Sbjct: 122 GQVYGVPITGLLVREPCCVAGSGSTHVNGYLTAHYRPGMNQDEAVTLARNAVLMAIHHDC 181
Query: 132 ASGGVVRTVTINSEGV-SRKFYPGD 155
++GGV+R IN G+ SR Y D
Sbjct: 182 STGGVIRIGVINETGMHSRICYHDD 206
>gi|302420863|ref|XP_003008262.1| proteasome component PRE3 [Verticillium albo-atrum VaMs.102]
gi|261353913|gb|EEY16341.1| proteasome component PRE3 [Verticillium albo-atrum VaMs.102]
Length = 364
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
C R + +AD+Q V+D V+Y L + ++ +P + AA++ + + Y+NK+ L G+I+
Sbjct: 122 CCRSV-SSADTQAVADIVQYQLGMYPMRNRKPPMTQTAASIFQEICYSNKDRLSAGLIIA 180
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQL 118
GWD+ GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+E M ++EA ++
Sbjct: 181 GWDERHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWQESMEEKEAVKI 234
>gi|300121066|emb|CBK21448.2| unnamed protein product [Blastocystis hominis]
Length = 230
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 11 QAADSQTVSDYVR----------YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG 60
AAD+Q + + +R ++L G V+ AA L + Y K+ LQ G
Sbjct: 62 SAADTQKIGNIIRQNLDFFKYICFYLLIARTTYGMNPIVRNAATLGHKIIYKYKDQLQAG 121
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
+I+ G D +G IY + LGG+++ A+GGSGS+Y+YGF D + M+ EE + V
Sbjct: 122 IIIAGIDDVDGASIYEITLGGSMLRVNVALGGSGSTYIYGFVDSNYNPNMSVEEGVEFVR 181
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSR 149
+AV LAI+RDG SGGVVRTV I +G R
Sbjct: 182 RAVQLAISRDGHSGGVVRTVVIRRDGAER 210
>gi|195383604|ref|XP_002050516.1| GJ22197 [Drosophila virilis]
gi|194145313|gb|EDW61709.1| GJ22197 [Drosophila virilis]
Length = 221
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 85/136 (62%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
A+ +QT+++ V Y ++ + +G+PA V+ AA R Y+++ + +IV GWD+ G
Sbjct: 58 ASQTQTLANTVAYAMNYYECSMGEPALVRDAAVHFRNKIYDSRQTMMASIIVAGWDRRHG 117
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+ G ++ +P A+ GSG++Y+ GF ++ GM + + +LV AV LAI D
Sbjct: 118 GQVYSVPITGLMVHEPCAVAGSGAAYIQGFVTAHYRPGMQQADTVELVKNAVQLAIQHDC 177
Query: 132 ASGGVVRTVTINSEGV 147
+SGG+VR IN G+
Sbjct: 178 SSGGIVRLGVINEYGM 193
>gi|123480905|ref|XP_001323441.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121906306|gb|EAY11218.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 216
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTI--QLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q ++ V+ +L+ I + +T+ VA+N++R L + +L G+IVGGWD
Sbjct: 61 AADTQFLARAVKNYLNALNITRENTDDSTILVASNVIRSLIVRYRQYLSAGVIVGGWDS- 119
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G ++Y + + G I++ A GSGS+Y+ + DQ ++E MT EEA + + AV+ AI R
Sbjct: 120 AGPQVYSIEVSGMAIKKKIASNGSGSTYIQAYIDQNYREDMTMEEATKFAIAAVTGAIIR 179
Query: 130 DGASGGVVRTVTINSEGVSR 149
DG+SGGVV V IN++G R
Sbjct: 180 DGSSGGVVNIVQINADGAKR 199
>gi|2654064|gb|AAB87682.1| LMP2 [Danio rerio]
Length = 141
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++ V AA LV+ +SY K L +IV GWDK G
Sbjct: 26 AADAQTIAEIVNYQLDVHSIEVEDDPLVCSAATLVKNISYKYKEELSAHLIVAGWDKKGG 85
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
G++Y L G + +QPFAIGGSGS Y+ GF D +K+ MTK E ++ VV A++LA+
Sbjct: 86 GQVYAT-LSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLAM 140
>gi|291226741|ref|XP_002733349.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
[Saccoglossus kowalevskii]
Length = 230
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q ++D ++Y++ + + V V A + LSY ++ +Q G+IV GWD G
Sbjct: 80 ADTQALADIIKYYMDMYRYYIDTNPMVSVVAKQFQSLSYTWRDKIQAGLIVAGWDSVNCG 139
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y +P+GG + Q I GSGSSY+ G+ D + MTK E A+SLAIARDG
Sbjct: 140 QVYSIPMGGACVRQHVTISGSGSSYISGYIDAYYHNQMTKNECMNFTTNAISLAIARDGG 199
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHE 162
SGGV+R I +GV RK G+ LP +++
Sbjct: 200 SGGVIRLAVITKDGVERKVILGNHLPCFYD 229
>gi|429965350|gb|ELA47347.1| hypothetical protein VCUG_01116 [Vavraia culicis 'floridensis']
Length = 201
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
+++ +Q +++Y + + V+ AANLVR L Y N L +IV G+D+ E
Sbjct: 56 RSSHTQIIAEYTSSKTNLFAYSNEREPLVRDAANLVRALVYYNP-MLTASIIVAGYDEEE 114
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G IY V LGGT++++ +A+GGSGS ++YG+ D ++ M+ +E +L K V LAI RD
Sbjct: 115 KGSIYSVNLGGTLLKREWAMGGSGSIFIYGYCDSMYRSDMSFDEKFELTKKLVQLAINRD 174
Query: 131 GASGGVVRTVTINSEGVSRKFYPGD 155
+SGG +R I EGV F PG+
Sbjct: 175 NSSGGCIRMAVIRKEGVENIFIPGN 199
>gi|440494438|gb|ELQ76818.1| 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3
[Trachipleistophora hominis]
Length = 201
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 5/147 (3%)
Query: 11 QAADSQTVSDYV--RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 68
+++ +Q V++YV R L +T + + V+ AANL+R + Y N L +IV G+D+
Sbjct: 56 RSSHTQAVAEYVASRTNLIAYTNE--REPLVRDAANLIRAVVYYNP-MLTASIIVAGYDE 112
Query: 69 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
+ G +Y + LGG+++++ +A+GGSGS++LYG+ D ++ M+ EE +L K V LAI
Sbjct: 113 EDKGSVYSINLGGSLLKREWAMGGSGSAFLYGYCDSMYRSDMSFEEKFELTKKLVQLAIK 172
Query: 129 RDGASGGVVRTVTINSEGVSRKFYPGD 155
RD SGG +R I EGV F PG+
Sbjct: 173 RDNMSGGCIRMTVIRREGVENIFIPGN 199
>gi|403345630|gb|EJY72191.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 222
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
++ + ++ YVRY++ +LG V+ AA ++R + Y+NKN L MI GWD Y+G
Sbjct: 74 SSHTSAIARYVRYYMEIQANELGNLPPVESAAQVMREIIYSNKNSLSASMICSGWDPYKG 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+IY V G + +A+ GSG ++++G+ D ++E M++ E ++ + ++LA RD
Sbjct: 134 YQIYQVNSSGYFEQGNWALSGSGGTFIWGYIDANYRENMSRAECKEFIKSCIALACFRDT 193
Query: 132 ASGGVVRTVTINSEGVSRKF--YP 153
+SGG +R + I + V R + YP
Sbjct: 194 SSGGCIRILDITQDRVERDYISYP 217
>gi|378756878|gb|EHY66902.1| proteasome subunit beta type-6 [Nematocida sp. 1 ERTm2]
Length = 217
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q +S+Y + ++ Q VK VA ++ +++ + G IV G D+
Sbjct: 69 SAADTQAISEYAKKIMNMGVFCHSQRPLVKDVAVSMKKIVWDATDQGVMAGFIVAGVDE- 127
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
GG I+ +PLGG +IEQ +++ GSGSSY+ G D A+KEGMTKEEA + V K VS AI R
Sbjct: 128 TGGHIFSIPLGGALIEQNWSVAGSGSSYITGLGDSAFKEGMTKEEAVEFVRKMVSHAIYR 187
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
D +SGG VR + I G G+ + +
Sbjct: 188 DNSSGGCVRMMIITEGGTEEITVLGNEVAV 217
>gi|198472075|ref|XP_002133330.1| GA28089 [Drosophila pseudoobscura pseudoobscura]
gi|198139592|gb|EDY70732.1| GA28089 [Drosophila pseudoobscura pseudoobscura]
Length = 238
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
N+ C R AAD+Q +S+ V + + G+ V+ A R YN + +L G+
Sbjct: 61 NVYCCRS-GSAADTQELSEVVSNLMWHREMHTGEKTLVRDVAAEFRDKCYNGRKYLYAGI 119
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWD G ++Y + LGG ++ + + GGSGS Y+ G ++ M KEE L
Sbjct: 120 IVGGWDDLHGAQVYNISLGGMMMREQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRS 179
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
A+ AI D SGGV R I EG+ R+ Y
Sbjct: 180 ALKQAIHHDSFSGGVSRIAIITKEGIERRVY 210
>gi|195156629|ref|XP_002019199.1| GL26231 [Drosophila persimilis]
gi|194115352|gb|EDW37395.1| GL26231 [Drosophila persimilis]
Length = 238
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
N+ C R AAD+Q +S+ V + + G+ V+ A R YN + +L G+
Sbjct: 61 NVYCCRS-GSAADTQELSEVVSNLMWHREMHTGEKTLVRDVAAEFRDKCYNGRKYLYAGI 119
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWD G ++Y + LGG ++ + + GGSGS Y+ G ++ M KEE L
Sbjct: 120 IVGGWDDLHGAQVYNIALGGMMMREQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRS 179
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
A+ AI D SGGV R I EG+ R+ Y
Sbjct: 180 ALKQAIHHDSFSGGVSRIAIITKEGIERRVY 210
>gi|198472043|ref|XP_002133324.1| GA28033 [Drosophila pseudoobscura pseudoobscura]
gi|198139580|gb|EDY70726.1| GA28033 [Drosophila pseudoobscura pseudoobscura]
Length = 238
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
N+ C R AAD+Q +S+ V + + G+ V+ A R YN + +L G+
Sbjct: 61 NVYCCRS-GSAADTQELSEVVSNLMWHREMHTGEKTLVRDVAAEFRDKCYNGRKYLYAGI 119
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
IVGGWD G ++Y + LGG ++ + + GGSGS Y+ G ++ M KEE L
Sbjct: 120 IVGGWDDLHGAQVYNISLGGMMMREQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRS 179
Query: 122 AVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
A+ AI D SGGV R I EG+ R+ Y
Sbjct: 180 ALKQAIHHDSFSGGVSRIAIITKEGIERRVY 210
>gi|240278372|gb|EER41878.1| proteasome component PRE3 [Ajellomyces capsulatus H143]
Length = 233
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 66/93 (70%)
Query: 60 GMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
G+I+ G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V
Sbjct: 129 GIIIAGYDARHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFV 188
Query: 120 VKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
++ AI DG+SGGV+R V + +G R Y
Sbjct: 189 KNSLQEAIKWDGSSGGVIRMVVLTEKGAVRHLY 221
>gi|154275784|ref|XP_001538737.1| proteasome component PRE3 precursor [Ajellomyces capsulatus NAm1]
gi|150413810|gb|EDN09175.1| proteasome component PRE3 precursor [Ajellomyces capsulatus NAm1]
Length = 174
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 66/93 (70%)
Query: 60 GMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
G+I+ G+D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V
Sbjct: 70 GIIIAGYDARHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFV 129
Query: 120 VKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
++ AI DG+SGGV+R V + +G R Y
Sbjct: 130 KNSLQEAIKWDGSSGGVIRMVVLTEKGAVRHLY 162
>gi|195120908|ref|XP_002004963.1| GI19318 [Drosophila mojavensis]
gi|193910031|gb|EDW08898.1| GI19318 [Drosophila mojavensis]
Length = 224
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AA +QT+++ V L V+ AA R Y+ + L +IV GWD+ G
Sbjct: 58 AAQTQTLAESVGSSLCGFQNVSNASCLVRDAAVQFRNKIYSTRKLLLASIIVAGWDRALG 117
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G++Y VP+ G ++ + +A+ GSGSSY+ GF +K G+ +E+A +V +A+ LAI +D
Sbjct: 118 GQVYTVPISGLLVPERYAMAGSGSSYIQGFMAAHFKPGLNQEDAVDVVKRAIRLAIRQDC 177
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
+SGGV+R I ++G+S YP + P H++ +
Sbjct: 178 SSGGVIRIGIITADGMSTSIYPKED-PDMHDKCTDSD 213
>gi|325090712|gb|EGC44022.1| proteasome component [Ajellomyces capsulatus H88]
Length = 217
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 84/152 (55%), Gaps = 17/152 (11%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQH-TIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIV 63
C R AAD+Q V+D V Y L + + +P T AA + + Y
Sbjct: 73 CCRS-GSAADTQAVADIVSYHLGMYGVVNQERPTTQTAAAAGIIIAGY------------ 119
Query: 64 GGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAV 123
D GG++Y +PLGG++ +Q +AIGGSGS+Y+YG+ D W+EGMT+EE + V ++
Sbjct: 120 ---DARHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSL 176
Query: 124 SLAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
AI DG+SGGV+R V + +G R Y D
Sbjct: 177 QEAIKWDGSSGGVIRMVVLTEKGAVRHLYLPD 208
>gi|387594237|gb|EIJ89261.1| hypothetical protein NEQG_00031 [Nematocida parisii ERTm3]
gi|387594984|gb|EIJ92611.1| hypothetical protein NEPG_02499 [Nematocida parisii ERTm1]
Length = 230
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q ++DY + ++ GQ VK VA + +++ + G IV G D+
Sbjct: 82 SAADTQAIADYAKRIMNTGIYCHGQKPLVKDVAVAIKKIVWDATDQGVTAGFIVAGVDE- 140
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
GG ++ +PLGG +IEQ ++I GSGS+Y+ G D +KE MTKEEA + V K VS A+ R
Sbjct: 141 TGGHVFTIPLGGALIEQNWSIAGSGSAYISGLGDSTFKEEMTKEEAVEFVKKMVSHAMYR 200
Query: 130 DGASGGVVRTVTINSEG 146
D +SGG VR + + G
Sbjct: 201 DNSSGGCVRMMIVTEAG 217
>gi|284814254|gb|ADB97491.1| proteasome subunit beta type 6 precursor-like protein [Aedes
albopictus]
Length = 134
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 65/104 (62%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q ++D V Y L+ H Q G+ V AA R YN ++ L G+IV G+D G
Sbjct: 30 AADTQAIADIVAYSLNYHENQTGEEPLVADAACEFRQYCYNYRDSLMAGIIVAGFDNKNG 89
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 115
G+++ VP+GG I Q IGGSGSSY+YGF + ++EGM K+E
Sbjct: 90 GQVFSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMPKDEC 133
>gi|324509220|gb|ADY43881.1| Proteasome subunit beta type-6 [Ascaris suum]
Length = 146
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYL 98
V A+ + R Y ++ L ++V G+D EGG++Y +PLGG + Q GSGS+++
Sbjct: 8 VSRASQIFRNFLYRYRDDLSASVLVAGYDDDEGGQLYAIPLGGYVTRQRCTASGSGSTFV 67
Query: 99 YGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
GF D WK G+ ++ +++V AV LA RDG+SGGV+R ++ G +R DT
Sbjct: 68 QGFLDNHWKPGLNADQCKEIVKTAVGLATYRDGSSGGVIRLAVVDKNGTTRTLIRPDT 125
>gi|322794592|gb|EFZ17601.1| hypothetical protein SINV_07917 [Solenopsis invicta]
Length = 98
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 63/89 (70%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
++LG V+ AAN+ R + YN ++ L G++V GWDK +GG++Y +P+GG + QP +I
Sbjct: 1 MELGTQPLVETAANVFREICYNYRDSLMAGILVAGWDKQKGGQVYSIPIGGMCVRQPISI 60
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
GGSGS+Y+YG+ D +K M+K+E +LV
Sbjct: 61 GGSGSTYVYGYVDAQFKSNMSKDECLKLV 89
>gi|348541143|ref|XP_003458046.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 2 [Oreochromis niloticus]
Length = 188
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 29/151 (19%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V ++ L H++Q+ P V AA++++ L Y NK+ LQ G +
Sbjct: 67 ADAQAVIKAAKFHLSFHSVQMESPPQVIAAASVLKDLCYKNKDELQAGFLT--------- 117
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+GS+Y+YG+ D +K MTKEE Q A++LA+ RD
Sbjct: 118 --------------------AGSTYIYGYVDAKYKPNMTKEECLQFATNALALAMGRDNV 157
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I +GV PGD LP +H+E
Sbjct: 158 SGGVAHLVVITEKGVEHVVVPGDKLPKFHDE 188
>gi|225705938|gb|ACO08815.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
Length = 184
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 73/151 (48%), Gaps = 33/151 (21%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFI---------- 116
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+Y+YG+ D +K M+KEE Q A++LA+ RD
Sbjct: 117 -----------------------TYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNV 153
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I EGV PGD LP +H+E
Sbjct: 154 SGGVAHLVVITEEGVEHIVIPGDKLPKFHDE 184
>gi|269860537|ref|XP_002649989.1| 20S proteasome core particle subunit beta 1 [Enterocytozoon
bieneusi H348]
gi|220066608|gb|EED44084.1| 20S proteasome core particle subunit beta 1 [Enterocytozoon
bieneusi H348]
Length = 206
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Query: 38 TVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSY 97
++K AAN++ + Y NK++L+ +I+GG D +G +IY + + GT+I A+ GSGS++
Sbjct: 85 SIKKAANILGNIIYENKDYLRASLILGGQD--DGFEIYKIAIDGTVIPSDCAVAGSGSAF 142
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG-VSRKFYPGDT 156
+YG+ D WK M ++A V+ V LAI RD ASGGVVR T+ S V+R G+
Sbjct: 143 VYGYVDTYWKPNMELKDALDFAVQVVRLAINRDVASGGVVRVATLESNNKVTRYLLDGNK 202
Query: 157 LPL 159
+ L
Sbjct: 203 VFL 205
>gi|162606488|ref|XP_001713274.1| 26S proteasome, beta-1 SU [Guillardia theta]
gi|12580740|emb|CAC27058.1| 26S proteasome, beta-1 SU [Guillardia theta]
Length = 198
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
++AD+Q + D ++ ++ + G+ V+ ++ L YN L+ MI GWD
Sbjct: 56 KSADNQNLCDKLKNYVIEKEFIYGRHVLVREVVQFIKTLMYNCN--LECTMICAGWDCTN 113
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G + Y + GG +I++ + G GS+Y+ G D + E M+ EE E+L+ K++S+AI +D
Sbjct: 114 GFQNYLITNGGGLIQKSIIVNGGGSNYISGLIDNNFNETMSLEECEKLITKSLSIAINKD 173
Query: 131 GASGGVVRTVTINSEGVSRK-FYP 153
SGG++R I+S G+ +K F P
Sbjct: 174 TRSGGIIRLTYISSAGMIKKCFLP 197
>gi|160331440|ref|XP_001712427.1| prsB1 [Hemiselmis andersenii]
gi|159765875|gb|ABW98102.1| prsB1 [Hemiselmis andersenii]
Length = 217
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AA +Q + +R + + + P V+ A + R Y +N + G I GWD + G
Sbjct: 58 AAQTQNTIENLRSLVLNNLFESKFPPKVQNLAQIFREYCYK-ENTVNAGFICAGWDCFRG 116
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
G+IY + GG + Q + GSGS ++ GF D +K M + +++ ++KA+SLAI RDG
Sbjct: 117 GQIYSITQGGYVFNQSIILMGSGSIFIQGFCDANFKLKMNETQSKNFLIKALSLAILRDG 176
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
SG +R I +G+ R F+ P + E++
Sbjct: 177 NSGSFIRLAKITKKGIERLFF-NPIKPFYKIEVQ 209
>gi|86769244|gb|ABD15170.1| large multifunctional protease 2 [Sus scrofa]
Length = 90
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
++L +P V AAN+VR +SY + L ++V GWD+ EGG++YG +GG +I QPFAI
Sbjct: 1 MELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-MGGMLIRQPFAI 59
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
GGSGS+Y+YG+ D A+K GM+ EE +
Sbjct: 60 GGSGSTYIYGYVDAAYKPGMSPEECRRFTT 89
>gi|73696578|gb|AAZ81009.1| proteasome subunit, beta type 6 [Macaca mulatta]
Length = 76
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 77 VPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGV 136
VP+GG ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV
Sbjct: 2 VPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGV 61
Query: 137 VRTVTINSEGVSRK 150
+R I GV R+
Sbjct: 62 IRLAAIAESGVERQ 75
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q ++D++ ++ TI QP TV+ AA+L+ LL Y K F +I+GG+D
Sbjct: 69 ADAQVLADWLNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQLILGGYDT--A 126
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + L G+++E+ + GSGS G + ++E M+ EEA +L VKAV +A+ RD
Sbjct: 127 PRLFSLDLYGSLVEEKYTSTGSGSPIAIGVLEDGYRENMSPEEARKLAVKAVQMALKRDS 186
Query: 132 ASGGVVRTVTINSEGV 147
A+G V +V I SEG+
Sbjct: 187 ATGDGVDSVIITSEGI 202
>gi|194381710|dbj|BAG64224.1| unnamed protein product [Homo sapiens]
Length = 154
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
I+L +P V AAN+VR +SY + L ++V GWD+ EGG++YG LGG + QPFAI
Sbjct: 44 IELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-LGGMLTRQPFAI 102
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
GGSGS+++YG+ D A+K GM+ EE +
Sbjct: 103 GGSGSTFIYGYVDAAYKPGMSPEECRRFTT 132
>gi|294878925|ref|XP_002768515.1| proteasome subunit beta type 6,9, putative [Perkinsus marinus ATCC
50983]
gi|239871073|gb|EER01233.1| proteasome subunit beta type 6,9, putative [Perkinsus marinus ATCC
50983]
Length = 104
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++Y +PLGGTII+Q A GGSGS+Y+ G D ++ M++ EAE V KAV+ A+ARDG+
Sbjct: 19 QVYSIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSRGEAEDFVAKAVAHAMARDGS 78
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLP 158
SGGV+R T+ + V+ K D +P
Sbjct: 79 SGGVIRVTTVTEKDVAEKCLYADKIP 104
>gi|357466451|ref|XP_003603510.1| Proteasome subunit beta type [Medicago truncatula]
gi|355492558|gb|AES73761.1| Proteasome subunit beta type [Medicago truncatula]
Length = 115
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 73/126 (57%), Gaps = 37/126 (29%)
Query: 66 WDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 125
WDKY+GG IYGVPLGGTI++QPFAIG E LV KAV L
Sbjct: 20 WDKYKGGHIYGVPLGGTIVQQPFAIG----------------------VREDLVKKAVLL 57
Query: 126 AIARDGASGGVVRTVTI------NSEGVS-RKFYPGDTLPLWHEELEPQNSLLDMMNVAS 178
AIARDG SGG VR + + N+ G S ++F P H+ELE +NSLL+++ +
Sbjct: 58 AIARDGDSGGGVRAIIVSHVQFLNTRGGSDQEFLP------RHDELEARNSLLNIL--GA 109
Query: 179 PEPMNM 184
PEPMN+
Sbjct: 110 PEPMNI 115
>gi|392343147|ref|XP_003754810.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-6-like
[Rattus norvegicus]
gi|392355617|ref|XP_003752090.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-6-like
[Rattus norvegicus]
Length = 247
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 84/158 (53%), Gaps = 17/158 (10%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q V+ Y L H I+L +P V S + L TG+
Sbjct: 96 HIFCCRS-GPAADTQAVT----YQLAFHRIELKEPPLVDT--------SLSXGEDLMTGI 142
Query: 62 IVGGWDKYEGGKIYGVPL-GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVV 120
++ G D EGG++Y P GG ++ Q FAI SS++YG+ D +E TK+E Q
Sbjct: 143 VIAGRDPQEGGQVYSSPWWGGVMVRQSFAIR---SSFIYGYVDATHQESTTKDECLQSTA 199
Query: 121 KAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 158
A++LA+ RDG+SGGV+R I GV + GD +P
Sbjct: 200 NALALALERDGSSGGVIRLAAIQQSGVEWQVLLGDQIP 237
>gi|402579914|gb|EJW73865.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 161
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 68/113 (60%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q +SD V+Y++ +++ + TV +A + R Y ++ L ++V G+D EG
Sbjct: 44 AADTQAISDIVKYYIEVYSMMEEEEVTVGRSAQIFRNFLYKYRDSLSASVLVAGYDDIEG 103
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G++Y +P+GG + Q A G GS+++ GF D WK GMT E+ +++ + S
Sbjct: 104 GQLYAIPMGGYVTRQRCAASGRGSTFVQGFLDSQWKPGMTAEKMQRISTQCSS 156
>gi|221054918|ref|XP_002258598.1| proteasome [Plasmodium knowlesi strain H]
gi|193808667|emb|CAQ39370.1| proteasome, putative [Plasmodium knowlesi strain H]
Length = 282
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 9 LFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 68
L Q D V+ + +YF + P V+ A++ + L Y N NFL G+I+GG+DK
Sbjct: 132 LAQNGDPNYVTKH-KYFYEDKFMDFNPP--VENVAHMTKKLLYANNNFLSCGLILGGYDK 188
Query: 69 YEGGKIYGVPLGGTIIEQ-PFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
+ ++Y + L G+I+++ +A+ GSGS Y+ + +K+ M+K+E +L++ V A+
Sbjct: 189 DKKQQLYSINLNGSIVQRFDYAVSGSGSVYIQSYLQDKYKKNMSKKECFELILGCVKYAM 248
Query: 128 ARDGASGGVVRTVTI 142
D +SGG+VR V I
Sbjct: 249 YNDNSSGGIVRIVNI 263
>gi|83317531|ref|XP_731201.1| proteasome subunit beta [Plasmodium yoelii yoelii 17XNL]
gi|23491164|gb|EAA22766.1| proteasome beta-subunit, putative [Plasmodium yoelii yoelii]
Length = 275
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQ-PFAIGGSGSSY 97
V+ A + + L Y N NFL G+I GG+DK + ++Y V L G+II++ +A+ GSGS Y
Sbjct: 152 VENVAYITKKLVYANNNFLSCGLIFGGYDKIKKQQLYSVNLNGSIIQKYDYAVSGSGSIY 211
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
+ + +K+ MTK+E L++ V AI D +SGG+VR + I
Sbjct: 212 IQSYLQDKYKKNMTKKECFDLILNCVKYAIYNDNSSGGIVRILNI 256
>gi|68072469|ref|XP_678148.1| proteasome precursor [Plasmodium berghei strain ANKA]
gi|56498519|emb|CAH93985.1| proteasome precursor, putative [Plasmodium berghei]
Length = 270
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQ-PFAIGGSGSSY 97
V+ A + + L Y N NFL G+I GG+DK + ++Y V L G+II++ +A+ GSGS Y
Sbjct: 147 VENVAYITKKLIYANNNFLSCGLIFGGYDKIKKQQLYSVNLNGSIIQKYDYAVSGSGSIY 206
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
+ + +K+ MTK+E L++ V AI D +SGG+VR + I
Sbjct: 207 IQSYLQDKYKKNMTKKECFDLILNCVKYAIYNDNSSGGIVRILNI 251
>gi|70941290|ref|XP_740951.1| proteasome precursor [Plasmodium chabaudi chabaudi]
gi|56519018|emb|CAH76013.1| proteasome precursor, putative [Plasmodium chabaudi chabaudi]
Length = 268
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQ-PFAIGGSGSSY 97
V+ A + + L Y N NFL G+I GG+DK + ++Y V L G+II++ +A+ GSGS Y
Sbjct: 145 VENVAYITKKLIYANNNFLSCGLIFGGYDKVKKQQLYSVNLNGSIIQKHDYAVSGSGSIY 204
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
+ + +K+ MTK+E L++ V AI D +SGG++R + I
Sbjct: 205 IQSYLQDKYKQNMTKKECFDLILNCVKYAIYNDNSSGGIIRILNI 249
>gi|124507175|ref|XP_001352184.1| proteasome precursor, putative [Plasmodium falciparum 3D7]
gi|23505215|emb|CAD51995.1| proteasome precursor, putative [Plasmodium falciparum 3D7]
Length = 282
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQ-PFAIGGSGSSY 97
V+ A++ + + Y N NFL +I GG+DK + ++Y V L G+IIE+ FA+ GSGS Y
Sbjct: 159 VENVAHITKKIIYTNNNFLSCALIFGGYDKIKKQQLYAVNLNGSIIEKHDFAVSGSGSIY 218
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
+ + +K+ MTK+E L++ V A+ D +SGG++R V I
Sbjct: 219 IQSYLQDKYKKFMTKKECFNLILNCVKYAMHNDNSSGGLIRIVNI 263
>gi|385302017|gb|EIF46168.1| proteasome component pre3 [Dekkera bruxellensis AWRI1499]
Length = 105
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 57 LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAE 116
L G+I+ G+D+ +GG+++ VPLGG++ + +AI GSGS+++YG+ + +K MTKE+
Sbjct: 2 LTAGIIIAGYDQKKGGQVFVVPLGGSLHQDEYAISGSGSAFIYGYCKKNFKPBMTKEQTI 61
Query: 117 QLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK-FYP 153
+ ++S AI DG+SGGV+R V + + G+ R FYP
Sbjct: 62 NFMKSSLSQAIRWDGSSGGVIRMVVLTAXGIERLIFYP 99
>gi|410931046|ref|XP_003978907.1| PREDICTED: proteasome subunit beta type-6-B like protein-like
isoform 2 [Takifugu rubripes]
Length = 184
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 33/151 (21%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ L H++Q+ P V AA++++ L Y NK LQ G I
Sbjct: 67 ADAQAVTKAAKFHLSFHSVQMETPPLVISAASVLKELCYQNKEELQAGFI---------- 116
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+Y+YG+ D +K M++EE Q A++LA+ RD
Sbjct: 117 -----------------------TYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNV 153
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
SGGV V I GV PGD LP +H+E
Sbjct: 154 SGGVANLVVITETGVEHLVVPGDKLPRFHDE 184
>gi|429327750|gb|AFZ79510.1| proteasome subunit y, putative [Babesia equi]
Length = 277
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 27 HQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIE- 85
H +T Q +K A + R L + +N L G+I+GG+D +G IY V LGGT+I
Sbjct: 149 HSYTYQTPDYPILKSLATVTRNLVHEYRNHLHCGIILGGFDS-DGPGIYNVTLGGTLIPI 207
Query: 86 QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSE 145
+ F GSGS Y+ F +KEGM K E +L+ K++ AI D ASGG++R + + +
Sbjct: 208 KDFVASGSGSGYITAFLQDNYKEGMEKNECLELLRKSIHYAIHNDNASGGIMRAIDVQAN 267
Query: 146 GVSRKFY 152
V +FY
Sbjct: 268 KVD-EFY 273
>gi|313215198|emb|CBY42868.1| unnamed protein product [Oikopleura dioica]
Length = 188
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQP-ATVKVAANLVRLLSYNNKNFLQTG 60
I C R AAD+Q ++ V+ L H I + + +V+ AA L + Y ++ G
Sbjct: 79 RIYCCRS-GSAADTQFIATAVKTRLEGHAIMIDEENPSVETAATLFKEYCYEYRDQFSAG 137
Query: 61 MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMT 111
++V GWD EGG+++ +PLGG I Q AIGGSGS+++YG D +KEGM+
Sbjct: 138 ILVAGWDPVEGGQVFSIPLGGMKIRQKVAIGGSGSTWIYGLVDNQFKEGMS 188
>gi|215259875|gb|ACJ64429.1| proteasome subunit beta type 6 [Culex tarsalis]
Length = 107
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
GG++Y VP+GG I Q IGGSGSSY+YGF + ++EGM K+E + V K++ A+ D
Sbjct: 3 GGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMAKDECMEFVKKSIFHAMYHD 62
Query: 131 GASGGVVRTVTINSEGVSRK--FYPGD 155
G+SGGV R IN +GV R F P D
Sbjct: 63 GSSGGVCRIGIINKDGVERHVFFAPRD 89
>gi|389583155|dbj|GAB65891.1| proteasome precursor [Plasmodium cynomolgi strain B]
Length = 269
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQ-PFAIGGSGSSY 97
V+ A++ + L Y N NFL G+I+GG+DK + ++Y V L G+I+++ +A+ GSGS Y
Sbjct: 146 VENVAHMTKKLLYANNNFLSCGLILGGYDKEKKQQLYSVNLNGSIVQRFDYAVSGSGSVY 205
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
+ + +K+ M+K+E +L++ V A+ D +SGG+VR V +
Sbjct: 206 IQSYLQDKYKKNMSKKECFELILGCVKYAMYNDNSSGGIVRIVNM 250
>gi|212276161|ref|NP_001130703.1| uncharacterized protein LOC100191806 [Zea mays]
gi|194689886|gb|ACF79027.1| unknown [Zea mays]
gi|413942809|gb|AFW75458.1| hypothetical protein ZEAMMB73_794961 [Zea mays]
Length = 155
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 41/43 (95%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK 54
AAD+Q +SDYVRYFLHQHTIQLGQPATVKVAANL+RLL+Y NK
Sbjct: 72 AADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNK 114
>gi|156081746|ref|XP_001608366.1| proteasome precursor [Plasmodium vivax Sal-1]
gi|148800937|gb|EDL42342.1| proteasome precursor, putative [Plasmodium vivax]
Length = 282
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQ-PFAIGGSGSSY 97
V+ A++ + L Y N +FL G+I+GG+DK + ++Y V L G+I+++ +A+ GSGS Y
Sbjct: 159 VENVAHMTKKLLYANNHFLSCGLILGGYDKEKKQQLYSVNLNGSIVQRFDYAVSGSGSVY 218
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
+ + +K+ M+K+E +L++ V A+ D +SGG+VR V +
Sbjct: 219 IQSYLQDKYKKNMSKKECFELILGCVKYAMYNDNSSGGIVRIVNM 263
>gi|443916811|gb|ELU37759.1| 20S proteasome subunit [Rhizoctonia solani AG-1 IA]
Length = 216
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y+L + Q + TV AA L + L Y NK+ L G+IV GWDK G
Sbjct: 129 AADTQAVADIVHYYLQMYEQQYNERPTVHAAATLFQKLCYENKDNLSAGIIVAGWDKDVG 188
Query: 72 GKIYGVPLGGTIIEQPFAIGG 92
+Y +PLGG + QP+AIGG
Sbjct: 189 PSVYNIPLGGGLFRQPWAIGG 209
>gi|355714035|gb|AES04869.1| proteasome subunit, beta type, 9 [Mustela putorius furo]
Length = 72
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++YG LGG + QPF IGGSGS+Y+YG+ D A+K GM+ EE A++LA+ RDG+
Sbjct: 1 QVYGT-LGGMLTRQPFTIGGSGSTYIYGYVDAAYKPGMSAEECRSFTTNAIALAMNRDGS 59
Query: 133 SGGVVRTVTINS 144
SGGV+ VTI +
Sbjct: 60 SGGVIYLVTITA 71
>gi|403222161|dbj|BAM40293.1| proteasome subunit y [Theileria orientalis strain Shintoku]
Length = 267
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 35/176 (19%)
Query: 12 AADSQTVSDYVRYF---LHQ----------------------------HTIQLG---QPA 37
AADSQT+S +RY L Q HT +L Q
Sbjct: 90 AADSQTLSTILRYHAQSLRQQLRRGGRGHAGSNLSMDVDTNDSLDNVTHTYKLDDTVQGP 149
Query: 38 TVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIE-QPFAIGGSGSS 96
+K A + L + +N L G+I+GG+D G +IY + LGGT++E + F GSGS
Sbjct: 150 PIKALATVTHNLVHQYRNALYCGVILGGYDFVNGPEIYNITLGGTLVEIEDFLATGSGSG 209
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
++ + +K+ M ++E L+ KA+ A+ D +SGG++R V+++ V+ ++
Sbjct: 210 FIVAYLQSNYKKNMNRDECLSLLKKAIEYAVLNDNSSGGIMRAVSVSRTAVNEYYF 265
>gi|84994864|ref|XP_952154.1| proteasome subunit y [Theileria annulata strain Ankara]
gi|65302315|emb|CAI74422.1| proteasome subunit y, putative [Theileria annulata]
Length = 294
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 73
D ++++ Y ++++I+L VK A L + +N L G+I+ G D+ G +
Sbjct: 153 DIDEMNEFDEYKTNEYSIELMNGPLVKSLAKATHNLVHEYRNMLYCGVILAGVDEL-GSQ 211
Query: 74 IYGVPLGGTIIE-QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
IY + LGGT+IE F GSGSS++ F +K+ T+E+ +L+ K++ AI D +
Sbjct: 212 IYNITLGGTLIEIDDFLATGSGSSFITAFLQDNYKKNSTQEDCLKLLKKSIEYAILNDNS 271
Query: 133 SGGVVRTVTINSEGVSRKFY 152
SGG++R + I V ++
Sbjct: 272 SGGIMRAIIITKYKVKEYYF 291
>gi|28273089|dbj|BAC56920.1| proteosome A [Theileria orientalis]
Length = 267
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 35/176 (19%)
Query: 12 AADSQTVSDYVRYF---LHQ----------------------------HTIQLG---QPA 37
AADSQT+S +RY L Q HT +L Q
Sbjct: 90 AADSQTLSTILRYHAQSLRQQLRRGGRGHAGSNLSMDVDTNDSLDNVTHTYKLDDTVQGP 149
Query: 38 TVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIE-QPFAIGGSGSS 96
+K A + L + +N L G+I+GG+D G +IY + LGGT++E + F GSGS
Sbjct: 150 PIKALATVTHNLVHQYRNALYCGVILGGYDFVNGPEIYNITLGGTLVEIEDFLATGSGSG 209
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
++ + +K+ M ++E L+ KA+ A+ D +SGG++R V+++ V+ ++
Sbjct: 210 FIVAYLQSNYKKNMNRDECLSLLKKAIEYAVLNDNSSGGIMRAVSVSRTAVNEYYF 265
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 219
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEG 71
AD Q V D + Q+ + G+P +++ AN L+ ++++ F+ MI+GGWD EG
Sbjct: 69 ADLQKVLDSLTATAIQYKVDTGKPISIRALANYASLVVFSSRPFVYLVHMILGGWDPDEG 128
Query: 72 GKIYGVPLGGTII-EQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
IY + GT+ E F GSGS +G + +K M+ EEA +L V+AV AI D
Sbjct: 129 PVIYMLDFFGTLTKETEFMATGSGSPTAFGVLEDGYKRDMSIEEAVRLAVRAVRSAIYHD 188
Query: 131 GASGGVVRTVTINSEG 146
SG + VTI EG
Sbjct: 189 PGSGEGIDVVTITKEG 204
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEG 71
AD Q V D + Q+ I+ G+P +++ AN L+ ++++ F+ MI GGWD EG
Sbjct: 66 ADLQKVLDALTATAIQYKIETGKPISIRALANYASLIVFSSRPFIYLVHMIFGGWDPDEG 125
Query: 72 GKIYGVPLGGTII-EQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
IY + GT+ E F GSGS +G + ++ M+ E+A +L V+AV AI D
Sbjct: 126 PVIYMLDFFGTLTRETEFMATGSGSPTAFGVLEDGYRRDMSIEDAIRLAVRAVRSAIYHD 185
Query: 131 GASGGVVRTVTINSEG 146
SG + VTI EG
Sbjct: 186 PGSGEGIDVVTITKEG 201
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 6 LRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVG 64
L L AD+Q + D +RY + H ++ P ++ A L L+ + N+ + ++VG
Sbjct: 55 LTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVG 114
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D EG ++ + + G++ ++ + GSGS YG ++ +KE +T EEA+++ ++AV
Sbjct: 115 GYDT-EGPALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYKEDLTVEEAKKIALRAVK 173
Query: 125 LAIARDGASGGVVRTVTINSEG 146
AI R+ +G + ++ +G
Sbjct: 174 AAIVRNIGTGDGINIAVMDKDG 195
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLL--SYNNKNFLQTGMIVGGWDKYE 70
AD+Q + + +Y + +++G+ ++ A+ + L+ +Y + +++GG D +E
Sbjct: 57 ADAQFLVENAKYIAKDYELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVD-HE 115
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G K+Y + L G++ + F GSGS +G +Q ++EG+T EEA++L KAVS AI RD
Sbjct: 116 GPKLYYMDLYGSVSRERFMSTGSGSPVAFGVLEQGYREGLTLEEAKELAFKAVSSAIMRD 175
Query: 131 GASGGVVRTVTINSEGVSRK 150
+G V V I EG+S +
Sbjct: 176 SFTGEGVDIVVIGPEGISEE 195
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + H ++ P ++ A L L+ + N+ + ++VGG+D EG
Sbjct: 62 ADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-EG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + + G++ ++ + GSGS YG ++ ++E +T EEA+++ ++AV AI R+
Sbjct: 121 PALFNIDMFGSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNI 180
Query: 132 ASGGVVRTVTINSEG 146
+G + ++ +G
Sbjct: 181 GTGDGINIAIMDKDG 195
>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
Length = 237
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 46 VRLLSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
++ LS NFL++G I+GG D EG IY + G+++E+ + GSGS + Y
Sbjct: 119 MQALSTLTSNFLRSGAFFIVHPILGGVDD-EGSHIYSIDPSGSVMEEDYNATGSGSPFAY 177
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
G +Q ++EG++ +EAE + AV A+ RD ASG + TI EGV+ + Y
Sbjct: 178 GVLEQQYEEGLSNDEAETVAAHAVKSAVERDTASGNGIIVSTITDEGVTTEEY 230
>gi|156085266|ref|XP_001610115.1| proteosome A [Babesia bovis T2Bo]
gi|154797367|gb|EDO06547.1| proteosome A, putative [Babesia bovis]
Length = 266
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 39 VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQP-FAIGGSGSSY 97
+K A + + + L G+I+GG+D G +IY V LGGT+++ P F GSGS Y
Sbjct: 150 LKALATATHKIVHEYREQLYCGIILGGYDMQHGPEIYNVTLGGTLLKVPHFVASGSGSGY 209
Query: 98 LYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVS 148
+ F ++ M++++ L+ +A+ AI D +SGG++R V+++ GVS
Sbjct: 210 ITAFLHDNYEPDMSRDQCLSLLKRAIKYAIDIDNSSGGLMRAVSVSRTGVS 260
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK--NFLQTGMIVGGWDKYE 70
AD QT++ +R + I++ +P +V+ AA L+ ++ + NK ++ M VGG D+ E
Sbjct: 59 ADIQTITKVIRANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETM-VGGIDE-E 116
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G K++ + G++IE FA G+G+ G + + +T +EA++L +KA+ AIARD
Sbjct: 117 GPKLFILDSWGSLIEDDFAALGNGARTAIGLIETGYSSSITVKEAKELAIKAIKEAIARD 176
Query: 131 GASGGVVRTVTINSEG 146
SG + T+ I G
Sbjct: 177 PTSGDGIDTLVITGNG 192
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + H ++ ++ A L L+ + N+ + +++GG+D G
Sbjct: 62 ADAQNIVDILRYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYDA-NG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V + G++ E+ + GSGS YG ++ +KE +T EEA+Q+ ++AV AI R+
Sbjct: 121 PSLFNVDMFGSVEEKSYVTTGSGSPVAYGLLEEEYKEDLTIEEAKQVALRAVKAAIVRNI 180
Query: 132 ASGGVVRTVTINSEG 146
+G + ++ +G
Sbjct: 181 GTGDGINIAIMDKDG 195
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + H ++ P ++ A L L+ + N+ + ++VGG+D G
Sbjct: 62 ADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFDA-NG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + + G++ E+ + GSGS YG ++ +K+ +T EEA+++ ++AV AI R+
Sbjct: 121 PALFNIDMFGSVEEKSYVTTGSGSPVAYGLLEEEYKKDLTVEEAKKIALRAVKAAIVRNI 180
Query: 132 ASGGVVRTVTINSEG 146
+G + ++ +G
Sbjct: 181 GTGDGINIAVMDKDG 195
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+QT++DY+R + + +P +++ A+L+ L+ K F +I+GG+D YEG
Sbjct: 81 ADAQTLADYIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + G + E+ + GSGS G + ++ M+ ++A LVVKAV+ A RD
Sbjct: 141 AKLFSIDYFGDVTEERYTATGSGSPIAIGVIESGYRPEMSIDDAVSLVVKAVATASMRDV 200
Query: 132 ASGGV 136
SGG+
Sbjct: 201 FSGGI 205
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 73
D+Q + D +R + G VK A L L+ + + L M++GG D +G
Sbjct: 63 DAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLILFQYRPILSVQMLIGGVDS-DGPS 121
Query: 74 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 133
++ V GT+ + + GSGS Y + ++E ++ EEA L VKAV++A+ARD S
Sbjct: 122 LFSVDWLGTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGS 181
Query: 134 GGVVRTVTINSEGVSRK 150
G V TI EG+ K
Sbjct: 182 GEGVDIATITKEGIRMK 198
>gi|448733676|ref|ZP_21715918.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
gi|445802196|gb|EMA52503.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
Length = 237
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 46 VRLLSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
++ LS NFL++G ++GG D EG IY + +GG+++E+ +A+ GSGS +
Sbjct: 119 MQALSTLTGNFLRSGAFFIVQPVLGGVDD-EGSHIYRIDIGGSVMEEDYAVSGSGSPFAL 177
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
G +Q + +G++ +EAE + +AV A+ RD ASG + + EGV+ + Y
Sbjct: 178 GVLEQEYDDGLSMDEAETVAARAVKSAVERDTASGNGITLSEVTEEGVTIENY 230
>gi|219127992|ref|XP_002184208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404439|gb|EEC44386.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 187
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 11 QAADSQTVSDYVRY-FLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKY 69
AAD+Q +++ R FLH+ + G TV A+ +R Y ++V G+D
Sbjct: 50 SAADTQQIAESARMTFLHRR-YRCGIVPTVSQVAHWIRSTVYEESTEGVVSLLVAGFDPE 108
Query: 70 E-GGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
+I+ V P G I E+ FA+ GSGS+Y+ G+ D +++ EA +L KA+ LAI
Sbjct: 109 SLKSRIFSVSPSGALIEEKTFAVSGSGSTYVLGYLDHHVSGDLSENEAIELCQKAIELAI 168
Query: 128 ARDGASGGVVRTVTINSEG 146
RDG+SGG + IN G
Sbjct: 169 DRDGSSGGRFNIIVINGLG 187
>gi|42600875|gb|AAS21214.1| proteasome subunit beta type 6 [Sus scrofa]
Length = 89
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+IV GWD EG
Sbjct: 16 AADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIVAGWDPQEG 75
Query: 72 GKIYGVPLGGTIIE 85
G++Y VP+GG ++
Sbjct: 76 GQVYSVPMGGMMVR 89
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q ++D +RY + H +Q + +K A L L+ + N+ + +++GG+D+ +G
Sbjct: 60 ADAQNLTDILRYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIADILLGGYDR-DG 118
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + + G++ ++ + GSGS YG + +++ +T E+A+ + ++AV AI R+
Sbjct: 119 PALFNIDMFGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKLIALRAVKAAIVRNI 178
Query: 132 ASGGVVRTVTINSEG 146
+G + IN G
Sbjct: 179 GTGDGINIAAINKNG 193
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLL--SYNNKNFLQTGMIVGGWDKYE 70
AD+Q + +Y R+ + + G+P +V A+ + L+ Y +++GG D +
Sbjct: 57 ADAQYIVEYARFLARDYEAETGKPISVGALASRISLVLSVYLRYVPFIVQLLLGGRD-HT 115
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + L G++ + + GSGS +G +Q ++ ++ EEA+ L KAVS AI RD
Sbjct: 116 GASLYYMDLYGSVTREKYMATGSGSPVAFGVLEQGYRSDLSLEEAKALAFKAVSSAIMRD 175
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH--EELEP 166
G +G V V I +G Y +T+PL EE +P
Sbjct: 176 GFTGEGVDVVVIGPQG-----YMEETIPLKRIVEEAKP 208
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q +SD +R + + + +V+ A+L+ + +++K F +IVGG+D
Sbjct: 75 ADAQILSDVLREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQP- 133
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + L G+I E + GSGS YG ++ ++E ++ EEA ++ A+ A+ RD
Sbjct: 134 -RLYTLDLFGSITEDKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDA 192
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTL 157
ASG V I +G KF P ++L
Sbjct: 193 ASGDGADVVVIGPQGYEEKFIPYNSL 218
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + H ++ P ++ A L L+ + N+ + ++VGG+D G
Sbjct: 62 ADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-NG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + + G++ ++ + GSGS YG ++ ++ +T EEA+++ ++AV AI R+
Sbjct: 121 PALFNIDMFGSVEQKSYVTTGSGSPVAYGLLEEEYRSDLTVEEAKKIALRAVKAAIVRNI 180
Query: 132 ASGGVVRTVTINSEG 146
+G + ++ +G
Sbjct: 181 GTGDGINIAVMDKDG 195
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 6 LRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVG 64
L L AD+Q + D +RY H I+ P +K A L L+ + N+ + +++G
Sbjct: 55 LTLAGGVADAQNIVDVLRYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMG 114
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D G +Y + + G++ E+ + GSGS YG ++ ++ +T +EA+ + ++AV
Sbjct: 115 GFDAV-GPALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVK 173
Query: 125 LAIARDGASGGVVRTVTINSEG 146
AI R+ +G + IN G
Sbjct: 174 AAITRNIGTGDGINVAVINGNG 195
>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 195
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 6 LRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVG 64
L L AD+Q + D +RY H I+ P +K A L L+ + N+ + +++G
Sbjct: 40 LTLAGGVADAQNIVDVLRYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMG 99
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G+D G +Y + + G++ E+ + GSGS YG ++ ++ +T +EA+ + ++AV
Sbjct: 100 GFDAV-GPALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVK 158
Query: 125 LAIARDGASGGVVRTVTINSEG 146
AI R+ +G + IN G
Sbjct: 159 AAITRNIGTGDGINVAVINGNG 180
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEG 71
AD Q+V ++ H++ I+ +P + N + L+ + ++ ++ I+GG D+ EG
Sbjct: 51 ADLQSVLSFLTLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V GT+ ++ + GSGS Y G + ++E MT E+A L +KAV AI D
Sbjct: 111 AVLYMVDWLGTVTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVDLAIKAVKAAIRNDP 170
Query: 132 ASG-GVVRTVTINSEGVSRKF 151
SG G+ V EG R F
Sbjct: 171 GSGEGIDVVVITRKEGFKRVF 191
>gi|340057211|emb|CCC51553.1| putative proteasome beta 5 subunit, fragment [Trypanosoma vivax
Y486]
Length = 292
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y+ +N+ L G +V GWD + G +Y V GT ++ GSGS
Sbjct: 166 SVAAASRILANITYSYRNYGLSMGTMVAGWDHF-GPSLYYVDDKGTRVKHELFSVGSGSI 224
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA L +++ A RDGASGG+V ++ +G
Sbjct: 225 YAYGVLDQGYRKDLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHEKG 274
>gi|71030968|ref|XP_765126.1| proteasome precursor [Theileria parva strain Muguga]
gi|68352082|gb|EAN32843.1| proteasome precursor, putative [Theileria parva]
Length = 279
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 37/177 (20%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQ-----PAT---------------------------- 38
AADSQT+S +RY QL P+T
Sbjct: 100 AADSQTLSTIIRYHAQSLKQQLKPAGRFPPSTRDEMDIDELSEFSGFKTNEYKLSSLENT 159
Query: 39 --VKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIE-QPFAIGGSGS 95
V+ A L + +N L G+I+ G D G +I+ V +GGT+IE + F GSGS
Sbjct: 160 PLVRSLARATHNLVHEYRNMLYCGVILAGVDSL-GAQIFNVTVGGTLIEIEDFLATGSGS 218
Query: 96 SYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
S++ F +K+ ++++E +L+ +++ AI D +SGG++R V + V+ ++
Sbjct: 219 SFITAFLQSNYKKNLSQDECLKLLKRSIEYAILNDNSSGGIMRAVVVTKHKVTEYYF 275
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + H ++ P ++ A L L+ + N+ + ++VGG+D G
Sbjct: 62 ADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-NG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + + G++ ++ + GSGS YG ++ ++ +T EEA+++ ++AV AI R+
Sbjct: 121 PALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEEAKKIALRAVKAAIVRNI 180
Query: 132 ASGGVVRTVTINSEG 146
+G + ++ +G
Sbjct: 181 GTGDGINIAVMDKDG 195
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEG 71
AD Q+V ++ ++ ++ +P ++ N V LL + ++ ++ IVGG D EG
Sbjct: 51 ADLQSVLSFLSLRAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V GT+ ++ + GSGS Y G + A++E +T +EA +L ++AV AI D
Sbjct: 111 PVLYMVDWLGTVTKEKYIATGSGSPYAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDP 170
Query: 132 ASGGVVRTVTIN-SEGVSRKF 151
SG + VTI S+G R F
Sbjct: 171 GSGEGIDVVTITKSDGFRRVF 191
>gi|329766105|ref|ZP_08257664.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137376|gb|EGG41653.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 167
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + H ++ P ++ A L L+ + N+ + ++VGG+D G
Sbjct: 19 ADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-NG 77
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + + G++ ++ + GSGS YG ++ ++ +T EEA+++ ++AV AI R+
Sbjct: 78 PALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEEAKKVALRAVKAAIVRNI 137
Query: 132 ASGGVVRTVTINSEG 146
+G + ++ +G
Sbjct: 138 GTGDGINIAVMDKDG 152
>gi|407849166|gb|EKG04000.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y+ +N+ L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 185 SVAAASKILANITYSYRNYGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHELFSVGSGSI 243
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA +L +++ A RDGASGG+V ++ G
Sbjct: 244 YAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGG 293
>gi|409723248|ref|ZP_11270548.1| proteasome beta subunit [Halococcus hamelinensis 100A6]
Length = 237
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 46 VRLLSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
++ L+ NFL++G I+GG D +G IY + GG+++E+P+ GSGS + Y
Sbjct: 119 IKALATLTSNFLRSGAFYIVQPILGGVDD-DGHHIYSIGPGGSVMEEPYNATGSGSPFAY 177
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
G +Q ++EG++ EEA+ + AV A+ RD ASG + I GV + +
Sbjct: 178 GVLEQQFEEGLSNEEAKTVATDAVKSAVERDTASGNGIIISEITDAGVDIEVH 230
>gi|71416085|ref|XP_810086.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70874567|gb|EAN88235.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y+ +N+ L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 185 SVAAASKILANITYSYRNYGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHELFSVGSGSI 243
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA +L +++ A RDGASGG+V ++ G
Sbjct: 244 YAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGG 293
>gi|71418280|ref|XP_810804.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
gi|70875393|gb|EAN88953.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
Length = 311
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y+ +N+ L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 185 SVAAASKILANITYSYRNYGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHELFSVGSGSI 243
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA +L +++ A RDGASGG+V ++ G
Sbjct: 244 YAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGG 293
>gi|51340809|gb|AAC97957.2| proteasome beta 5 subunit [Trypanosoma cruzi]
Length = 261
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y+ +N+ L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 135 SVAAASKILANITYSYRNYGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHELFSVGSGSI 193
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA +L +++ A RDGASGG+V ++ G
Sbjct: 194 YAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGG 243
>gi|448729602|ref|ZP_21711917.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
gi|445794904|gb|EMA45442.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
Length = 232
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
VR + + + A + ANL+R + NF ++GG D +G +Y + GG
Sbjct: 101 VRLYETRRDTGMSLEALANLTANLLR-----SGNFHIVQPVLGGVDD-DGSHVYSIGPGG 154
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+++ + +A+ GSGS + G +Q + EGM+ ++AE + +AV A RD ASG + T
Sbjct: 155 SVMAEDYAVSGSGSPFALGVLEQEYDEGMSVDDAETIAARAVQSATERDTASGNGLTLAT 214
Query: 142 INSEGVSRKFY 152
I ++GV+ Y
Sbjct: 215 ITADGVTIDTY 225
>gi|91095213|ref|XP_968869.1| PREDICTED: similar to proteasome subunit beta type 6 [Tribolium
castaneum]
Length = 181
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
+I C R AAD+Q ++D V Y L H ++LG+ V+ A + R L YN ++ L G+
Sbjct: 64 HIYCCRS-GSAADTQAIADIVAYHLSFHGMELGEEPLVETGAAVFRELCYNYRDSLMAGI 122
Query: 62 IVGGWDKYEGGKIYGVPLGG 81
+V GWDK +GG++Y +P+GG
Sbjct: 123 LVAGWDKRKGGQVYSIPIGG 142
>gi|401412600|ref|XP_003885747.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
gi|325120167|emb|CBZ55721.1| Family T1, proteasome beta subunit, threonine peptidase, related
[Neospora caninum Liverpool]
Length = 310
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGW-DKY 69
AAD ++ ++ G+P V A+N++ + ++ + + L G ++ GW +K
Sbjct: 146 AADCSYWERHMWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKE 205
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
E ++Y V T ++ GSGS+Y YG D +K MT EEA +L +A+ A R
Sbjct: 206 EKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHR 265
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSL 170
DG SGGVVR I+ G + K PG + H E + +
Sbjct: 266 DGGSGGVVRVFHIHRGGWT-KVIPGMDVSELHYEYAAKKGM 305
>gi|237842737|ref|XP_002370666.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|211968330|gb|EEB03526.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
gi|221485637|gb|EEE23918.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221502989|gb|EEE28699.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 309
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGW-DKY 69
AAD ++ ++ G+P V A+N++ + ++ + + L G ++ GW +K
Sbjct: 145 AADCSYWERHMWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKD 204
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
E ++Y V T ++ GSGS+Y YG D +K MT EEA +L +A+ A R
Sbjct: 205 EKPELYFVDDKATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHR 264
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSL 170
DG SGGVVR I+ G +K PG + H E + +
Sbjct: 265 DGGSGGVVRVFHIHRGGW-KKVIPGMDVSELHYEYAAKKGM 304
>gi|407409749|gb|EKF32460.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 311
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y+ +N+ L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 185 SVAAASKILANITYSYRNYGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHELFSVGSGSI 243
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA +L +++ A RDGASGG+V ++ G
Sbjct: 244 YAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTVYHVHQGG 293
>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 206
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLL--SYNNKNFLQTGMIVGGWDKYE 70
AD+Q + D RY + + G+ T++ +N + L+ +Y +++GG D+ E
Sbjct: 56 ADAQVLVDEARYIARLYELDYGRRITLRSLSNYMSLILSAYLRYVPFIVQLLLGGVDE-E 114
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + L G+I ++ +A GSGS YG ++ +++ M+ EEA+ L KAV A++RD
Sbjct: 115 GPSLYYLDLYGSISKEKYASTGSGSPVAYGVLEKEYRKDMSLEEAKHLAFKAVEAALSRD 174
Query: 131 GASGGVVRTVTI 142
G SG V V I
Sbjct: 175 GFSGEGVDVVVI 186
>gi|225705212|gb|ACO08452.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 156
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+QT+++ V Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK G
Sbjct: 67 AADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGG 126
Query: 72 GKIYGVPLGGTIIEQPFA 89
G++Y V L G + QPF
Sbjct: 127 GQVY-VTLNGLLSRQPFC 143
>gi|4704625|gb|AAD28184.1|AF110028_1 proteasome subunit LMP2 [Bos taurus]
Length = 63
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 42 AANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGF 101
AAN+VR ++Y + L ++V GWD+ EGG++YG + G + QPFAIGGSGS+Y+YG+
Sbjct: 1 AANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGT-MSGMLTRQPFAIGGSGSTYIYGY 59
Query: 102 FDQA 105
D A
Sbjct: 60 VDAA 63
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q ++D +RY + H +Q + ++ A L L+ + N+ + +++GG+D+ +G
Sbjct: 62 ADAQNLTDILRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIADILLGGYDQ-DG 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + + G++ ++ + GSGS YG + +++ +T E+A+ + ++AV AI R+
Sbjct: 121 PQLFNIDMFGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKGIALRAVKAAIVRNI 180
Query: 132 ASGGVVRTVTINSEG 146
+G + I+ G
Sbjct: 181 GTGDGINIAAIDKNG 195
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + +Y++ + + ++ G+PATV+ AA++ + + ++ F M++GG D+ G
Sbjct: 60 DAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDE-TGP 118
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
KIY V G IE + GSGS YG + +K+ M+ E+A + ++A+ + RD
Sbjct: 119 KIYSVDPAGGKIEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIKSSTKRDTF 178
Query: 133 SG-GVVRTVTINSEGVSR 149
SG G+ V EG R
Sbjct: 179 SGDGISLAVVTEKEGFKR 196
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEG 71
AD Q++ ++ ++ I+ +P ++ N V L+ + ++ ++ I+GG D+ EG
Sbjct: 51 ADLQSLLSFLTLRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V GT+ + + GSGS Y G + ++E M+ E+A L +++V AI D
Sbjct: 111 AVLYMVDWLGTVTRERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIRSVKAAIRNDP 170
Query: 132 ASGGVVRTVTINSEGVSRKF 151
SG + V I EG R F
Sbjct: 171 GSGEGIDVVVITKEGFRRVF 190
>gi|342184267|emb|CCC93748.1| proteasome beta 5 subunit [Trypanosoma congolense IL3000]
Length = 307
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y +N+ L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 181 SVAAASKILANITYQYRNYGLSMGTMVAGWDQF-GPSLYYVDGEGTRVKHEIFSVGSGSI 239
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG D +++ +T EEA L +++ A RDGASGG+V ++S G
Sbjct: 240 YAYGVLDHGYRKDLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHSNG 289
>gi|223972919|gb|ACN30647.1| unknown [Zea mays]
Length = 102
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINS 144
D WKEGM++EEAE+ VVK VSLA+ARDGASGGVVRTVT++S
Sbjct: 45 ALLDHEWKEGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTVSS 89
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + +R + +QLG+ V+ A ++ L+ Y+ K L T ++VGG+D+ +G
Sbjct: 68 DAQFIIRALRMEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDE-KGP 126
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+IY + G++IE + GSG G ++ ++E + +EAE+L V A+ AI RD
Sbjct: 127 QIYVLDPVGSLIEDKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAV 186
Query: 133 SGGVVRTVTINSEGVSRKFY 152
SG V + I EG S + Y
Sbjct: 187 SGDGVDVLRITEEGYSLREY 206
>gi|408405837|ref|YP_006863820.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408366433|gb|AFU60163.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 192
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNFLQ---TGMIVGGWDKYEGGKIYGVPLGGTIIEQP 87
++ G P TVK +A L+ L+Y+ Q ++V G D+ EGG IY + G I +
Sbjct: 69 LRRGFPLTVKESARLISNLAYSGMKNYQPYFVELLVAGVDQ-EGGHIYAADMSGAITSED 127
Query: 88 FAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 142
FA GSGS YG + + + +T EEA+Q+ KAVS A+ RD SG + + I
Sbjct: 128 FASSGSGSPIAYGVLESMYHKEITNEEAKQVATKAVSAAMERDPGSGNGIDVLVI 182
>gi|71747590|ref|XP_822850.1| proteasome subunit beta 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|10185394|emb|CAC08538.1| proteasome PRCE (beta-5) subunit precursor [Trypanosoma brucei]
gi|70832518|gb|EAN78022.1| proteasome beta 5 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332661|emb|CBH15656.1| proteasome beta 5 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 310
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y +N L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 181 SVAAASKILANITYQYRNHGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHEIFSVGSGSI 239
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA L +++ A RDGASGG+V ++ +G
Sbjct: 240 YAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKG 289
>gi|27151809|gb|AAM76148.2|AF483068_1 proteosome subunit Y [Boltenia villosa]
Length = 67
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
Y+YG D +KE MTKEE Q A++LA+ RDG+SGGVVR I+ +GV R+ G+
Sbjct: 1 YIYGHVDSTFKENMTKEECLQFTGNALALAMNRDGSSGGVVRLAAISKDGVERRVILGNE 60
Query: 157 LPLWHE 162
LP ++E
Sbjct: 61 LPRFYE 66
>gi|7141312|gb|AAF37285.1|AF226674_1 20S proteasome beta 5 subunit [Trypanosoma brucei]
Length = 250
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ ++ ++Y +N L G +V GWD++ G +Y V GT ++ GSGS
Sbjct: 121 SVAAASKILANITYQYRNHGLSMGTMVAGWDQF-GPSLYYVDDKGTRVKHEIFSVGSGSI 179
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG DQ +++ +T EEA L +++ A RDGASGG+V ++ +G
Sbjct: 180 YAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKG 229
>gi|218884599|ref|YP_002428981.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|302595713|sp|B8D683.1|PSB2_DESK1 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|218766215|gb|ACL11614.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
Length = 206
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLL--SYNNKNFLQTGMIVGGWDKYE 70
AD+Q + + RY ++ I++G P +K A+ + L+ Y + +++GG D
Sbjct: 57 ADAQYIVENARYIAREYEIEMGGPIPIKALASRISLILSVYLRYSPFIVQLLLGGRDS-T 115
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + L G++ + + GSGS +G ++ ++ ++ EEA++L AVS AI RD
Sbjct: 116 GASLYYMDLYGSVTREKYMATGSGSPVAFGILEKNYRSDLSLEEAKKLAFNAVSSAIMRD 175
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G SG V V I Y +T+PL
Sbjct: 176 GFSGEGVDIVVIGP-----GIYSEETIPL 199
>gi|390939089|ref|YP_006402827.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
16532]
gi|390192196|gb|AFL67252.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
16532]
Length = 207
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLL--SYNNKNFLQTGMIVGGWDKYE 70
AD+Q + + RY ++ I++G P +K A+ + L+ Y + +++GG D
Sbjct: 58 ADAQYIVENARYIAREYEIEIGGPIPIKALASRISLILSVYLRYSPFIVQLLLGGRDS-T 116
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + L G++ + + GSGS +G ++ ++ ++ EEA++L AVS AI RD
Sbjct: 117 GASLYYMDLYGSVTREKYMATGSGSPVAFGILEKNYRSDLSLEEAKKLAFNAVSSAIMRD 176
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G SG V V I Y +T+PL
Sbjct: 177 GFSGEGVDIVVIGP-----GIYSEETIPL 200
>gi|290992091|ref|XP_002678668.1| predicted protein [Naegleria gruberi]
gi|284092281|gb|EFC45924.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ + ++ + +V A+ L+ + Y K+ L G ++ GWD +
Sbjct: 133 AADCQFWERYLGMQCRLYELRNKRRISVAAASKLLSNIVYQYKDHGLSMGTMIAGWD-HT 191
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS Y YG DQ ++ +T+EEA +L +A+ A RD
Sbjct: 192 GPNLFMVDNDGTRLKGTRFSVGSGSLYAYGVLDQGYRADLTEEEACELGRRAIYHATHRD 251
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLD 172
SGG++ I S+G + K D L + + P+ +LD
Sbjct: 252 AYSGGIINVYLIRSDGWT-KISSTDMNELHYGKYAPEKGILD 292
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ G IY + G+I+E+ + + GSGS Y G +Q +K+
Sbjct: 134 NFLRSGGFYVVQPILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFKD 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
G++ EEA+Q+ KA+ A+ RD ASG + + +GV
Sbjct: 193 GLSIEEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|253746973|gb|EET01937.1| Proteasome subunit beta type 9 precursor [Giardia intestinalis ATCC
50581]
Length = 221
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 34 GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGS 93
G V AAN++ + + + FL I+GG D G +GG+++E+ +AI GS
Sbjct: 101 GMDPMVATAANILSIYLHKYREFLHAAFILGGVDN-TGFHCINAMIGGSVLEEDYAISGS 159
Query: 94 GSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
G ++ G + +K +T+ EA L K + AI+ D SGG +R V I G++ +
Sbjct: 160 GGVFIKGLMKELYKPELTRAEAIDLACKLLRTAISLDTKSGGFMRFVAIEQGGLAEE 216
>gi|154419010|ref|XP_001582522.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121916758|gb|EAY21536.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 256
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + + H + QP TV A+ ++ Y K + L G ++ G+D
Sbjct: 102 AADCQYWLRNLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICGYDNTG 161
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
Y G I + F++G SGS++ YG D ++E MTKEEA +L +A+ A RD
Sbjct: 162 PHIFYIDNHGSRIAGKRFSVG-SGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRD 220
Query: 131 GASGGVVRTVTINSEGV 147
SGG V V I GV
Sbjct: 221 SGSGGRVSVVHITQNGV 237
>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
Length = 290
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD + + ++ G+ +V A+ ++ + ++ + + L G+++ G+DK +
Sbjct: 128 AADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDK-D 186
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V G+ ++ GSGS Y YG D ++ +T EEA L +A+ +A RD
Sbjct: 187 GPHLYYVDNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRD 246
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
G SGG+VR IN GV K PG+ + H
Sbjct: 247 GGSGGLVRVYQINKSGVI-KHVPGEDVSELH 276
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD + + ++ G+ +V A+ ++ + ++ + + L G+++ G+DK +
Sbjct: 128 AADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDK-D 186
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V G+ ++ GSGS Y YG D ++ +T EEA L +A+ +A RD
Sbjct: 187 GPHLYYVDNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRD 246
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH 161
G SGG+VR IN GV K PG+ + H
Sbjct: 247 GGSGGLVRVYQINKNGVI-KHVPGEDVSELH 276
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ +GG IY + G+I+E+ + + GSGS Y G ++ + +
Sbjct: 134 NFLRSGAFFVVQPILGGVDE-DGGHIYSIDPAGSILEEEYTVTGSGSQYALGVLEREYSD 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
+T +EA+Q+ A+ A+ RD ASG + + EGV
Sbjct: 193 DLTVDEAKQVATNAIRAAVERDLASGNGINIAVVTDEGV 231
>gi|448733559|ref|ZP_21715802.1| proteasome subunit beta [Halococcus salifodinae DSM 8989]
gi|445802448|gb|EMA52753.1| proteasome subunit beta [Halococcus salifodinae DSM 8989]
Length = 231
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
VR + + + A + ANL+R + NF ++GG D +G +YG+ GG
Sbjct: 100 VRLYETRRDTGMSLEALANLTANLLR-----SGNFQIVQPVLGGVDD-DGSHVYGIGPGG 153
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+++ + +A+ GSGS + G +Q + G + E+A+ + +AV A RD ASG + T
Sbjct: 154 SVMAEDYAVSGSGSPFALGVLEQEYDVGTSVEDAKTIAARAVQSATERDTASGNGLTLAT 213
Query: 142 INSEGVSRKFY 152
I ++GV+ Y
Sbjct: 214 ITADGVTIDTY 224
>gi|159113877|ref|XP_001707164.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
50803]
gi|157435267|gb|EDO79490.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
50803]
Length = 221
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 34 GQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGS 93
G V AAN++ + + + FL I+GG D G +GG+++E+ +AI GS
Sbjct: 101 GMDPMVATAANIISIYLHKYREFLHAAFILGGVDN-TGFHCINSMIGGSVLEEDYAISGS 159
Query: 94 GSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRK 150
G ++ G + ++ +T+ EA L K + AI+ D SGG +R V + +G++ +
Sbjct: 160 GGVFIKGLMKELYRPELTRTEAINLAHKLLKTAISLDTKSGGFMRFVAVEQDGLAEE 216
>gi|3914430|sp|O24361.1|PSB5_SPIOL RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S
proteasome subunit E; AltName: Full=Proteasome epsilon
chain; Flags: Precursor
gi|2285800|dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea]
Length = 272
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + YN + L G ++ GWD+
Sbjct: 104 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETG 163
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K MT EEA +L +A+ A RD
Sbjct: 164 PGLYYVDSEGGRLKGMRFSVG-SGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRD 222
Query: 131 GASGGVVRTVTINSEG 146
GASGGVV + +G
Sbjct: 223 GASGGVVSVYHVGPDG 238
>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 228
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 46 VRLLSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
++ LS NFL++G I+GG D EG IY + G+++E+ + GSGS + Y
Sbjct: 110 MQALSTLTSNFLRSGAFYIVQPILGGVDD-EGAHIYSIDPAGSVMEEEYDATGSGSPFAY 168
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
G +Q +++G++ +EA + +AV A+ RD ASG + I +GV
Sbjct: 169 GVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNGIIISEITEDGV 216
>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
Length = 228
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 46 VRLLSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
++ LS NFL++G I+GG D EG IY + G+++E+ + GSGS + Y
Sbjct: 110 MQALSTLTSNFLRSGAFYIVQPILGGVDD-EGAHIYSIDPAGSVMEEEYDATGSGSPFAY 168
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
G +Q +++G++ +EA + +AV A+ RD ASG + I +GV
Sbjct: 169 GVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNGIILSEITEDGV 216
>gi|357134356|ref|XP_003568783.1| PREDICTED: proteasome subunit beta type-7-B-like [Brachypodium
distachyon]
Length = 272
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V LH H + + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLHLHRYATSRESRVVTALTLLKTHLFNYQGHVSAALVLGGVD-VTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ +KEG+T+EE QLV +A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVAEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|195018492|ref|XP_001984791.1| GH16666 [Drosophila grimshawi]
gi|193898273|gb|EDV97139.1| GH16666 [Drosophila grimshawi]
Length = 272
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H + + V A N+++ + + + + +++GG DKY G
Sbjct: 88 AADTEMTTDLISSQLELHRLSTERQVPVVCANNILKQMLFRYQGHISAALVLGGVDKY-G 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK +T+EEA+ LV A++ I D
Sbjct: 147 PHIYCIHPHGSADKLPYATMGSGSLAAMAVFESRWKPDLTEEEAKLLVRDAIASGIFNDL 206
Query: 132 ASGGVVRTVTINSE 145
SG V I +
Sbjct: 207 GSGSNVDLCVIRKD 220
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL+TG I+GG D +G IY + G+I+E+ + + GSGS Y G +Q + +
Sbjct: 134 NFLRTGGFYIVQPILGGVDD-DGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSD 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ +EA+Q+ KA+ A+ RD ASG + + EGV
Sbjct: 193 DLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTDEGV 231
>gi|154345734|ref|XP_001568804.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066146|emb|CAM43936.1| putative proteasome beta 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ G +V A+ ++ ++Y +N L G +V GWD++ G +Y V G+ ++Q
Sbjct: 167 LRNGSRISVAAASKILANITYAYRNHGLSMGTMVAGWDQF-GPSLYYVDDKGSRVKQDLF 225
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
GSGS Y YG D +++ ++ E+A L +++ A RDGASGG+V I++ G ++
Sbjct: 226 SVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYHIHANGWTK 285
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLL-SYNNKNFLQTGMIVGGWDKYE 70
AD++ +++ R+ ++ ++LG+P V +A+NL +L +Y + +++GG+D
Sbjct: 61 ADAEIIAEQARFIARKYKLELGRPIKVSGLASNLSIILNTYLRASPYIVQLLLGGYDN-N 119
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + L G++ E+ + GSGS +G ++ ++ ++ EEA++L KAVS A RD
Sbjct: 120 GPHLFYMDLYGSLSEEKYMATGSGSPTAFGVLEEGYRSDLSLEEAKELAFKAVSAATRRD 179
Query: 131 GASGGVVRTVTI 142
G SG V V I
Sbjct: 180 GFSGEGVDIVVI 191
>gi|401420044|ref|XP_003874511.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490747|emb|CBZ26011.1| putative proteasome beta 5 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 302
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ G TV A+ ++ ++Y +N L G ++ GWD++ G +Y V G+ ++Q
Sbjct: 167 LRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDRF-GPSLYYVDDKGSRVKQDLF 225
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
GSGS Y YG D +++ ++ E+A L +++ A RDGASGG+V ++ +G ++
Sbjct: 226 SVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYHVHEKGWTK 285
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 32 QLGQPATVKVAANLVRLLSYNNKNFLQTG-MIVGGWDKYEGGKIYGVPLGGTIIEQPFAI 90
Q G+ +VK A L+ + K F +VGG+D E K+Y V + G I E +A
Sbjct: 79 QSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYD--EKPKLYSVDMVGGITEDKYAT 136
Query: 91 GGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
GSG + Y D +K+ +T EE +L VKA++ AI RD SG + VTI EG
Sbjct: 137 AGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEG 192
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK--NFLQTGMIVGGWDKYEG 71
D Q + D ++Y + + ++ + AT A L+ +L Y + ++VGG D G
Sbjct: 54 DFQELVDVLKYNITMYELENEKAATPTNVAKLLSILLYQGRFSGIYYAELVVGGIDN-SG 112
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
KI+ + G ++E+ F+ GSG+ G ++ +KEGM+++EA +L +A+ AI+RD
Sbjct: 113 PKIFVLDPAGGLMEENFSAVGSGAQIATGILERFFKEGMSEKEAVELAERAMREAISRDA 172
Query: 132 ASGGVVRTVTINSEGVSRKFYP 153
SG + + I S+G +F P
Sbjct: 173 LSGDGIDLLIITSKGSRMEFIP 194
>gi|339777225|gb|AEK05509.1| 20S proteasome beta subunit [Dimocarpus longan]
Length = 268
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ ++ + ++Q +++GG D G
Sbjct: 83 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFSYQGYVQAALVLGGVD-VTG 141
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LVV+A+ I D
Sbjct: 142 PHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTRDEGIKLVVEAICSGIFNDL 201
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 202 GSGSNVDVCVIT 213
>gi|340502310|gb|EGR29012.1| proteasome subunit beta type, putative [Ichthyophthirius
multifiliis]
Length = 286
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ ++ +Q G+ +V A+ ++ + Y KN L G ++ GWD +
Sbjct: 117 AADCQFWEQYLAIQCRKYQLQHGERVSVAAASRILINILYGYKNQGLSVGCMLAGWDN-Q 175
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++Y + G+ I+ GSGS+Y YG D +K ++ +EA +L +A+ A RD
Sbjct: 176 GPQLYYLDNDGSRIKGDLFSVGSGSTYAYGVLDSHYKWDLSLKEAVELGKRAIYHATFRD 235
Query: 131 GASGGVVRTVTINSEG 146
SGGVVR ++ G
Sbjct: 236 AGSGGVVRVYHVHQGG 251
>gi|307192825|gb|EFN75885.1| Proteasome subunit beta type-7 [Harpegnathos saltator]
Length = 277
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ ++ + L H + +G+ V A +++ + + + + +++GG+D +G
Sbjct: 88 AADTEMTTEMIASQLELHRLNIGRIVPVCTANTMIKQMLFRYQGHIGAALVLGGYD-LDG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + G+ +Q + GSGS F+ WK +++EEA+QLV A+ + D
Sbjct: 147 PQLYCIFPHGSTEKQKYTTMGSGSLAAMAVFESRWKPDLSEEEAKQLVADAIRAGVFNDL 206
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
ASG V I GV P DT
Sbjct: 207 ASGSNVDLCIIRKSGVEY-LRPYDT 230
>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
Length = 276
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q ++ + ++ Q T A+ ++ + Y+ K + L G ++ G+D
Sbjct: 111 AADCQFWERHLGKLCKLYELRNNQRITTAAASKMLANIMYSYKGYGLSCGTMIAGYDAVT 170
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V GT ++ GSGS+Y YG D +K +T +EA L +A+ A +D
Sbjct: 171 GPALYMVDDQGTRLKNNMFSVGSGSTYAYGIVDAGYKHDLTLDEAVALGKRAIYHATNKD 230
Query: 131 GASGGVVRTVTINSEG 146
GASGG VR ++ +G
Sbjct: 231 GASGGYVRVYHVHKDG 246
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ +GG IY + G+I+E+ + + GSGS Y G ++ + +
Sbjct: 134 NFLRSGAFFVVQPILGGVDE-DGGHIYSIDPAGSILEEEYTVTGSGSQYALGVLEREYSD 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ +EA+Q+ A+ A+ RD ASG + + EGV
Sbjct: 193 DLSVDEAKQVATNAIRAAVERDLASGNGINIAVVTDEGV 231
>gi|452821836|gb|EME28862.1| 20S proteasome subunit beta 2 [Galdieria sulphuraria]
Length = 275
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + V L H + G+ + V A L++ + + + ++ +++GG D Y G
Sbjct: 85 AADTENTTALVSSQLELHRLNSGRESRVTTALTLLKRMLFRYQGYVSAALVLGGVDFY-G 143
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V G+ PF GSGS F+ + + M++EEAE+LV +A+S I D
Sbjct: 144 PHLYTVYPHGSTDRLPFVTMGSGSLAAMSVFESKYMDDMSREEAEKLVYEAISAGIYNDL 203
Query: 132 ASGGVVRTVTIN 143
SGG V I
Sbjct: 204 GSGGNVDLCVIT 215
>gi|146104190|ref|XP_001469755.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|398024254|ref|XP_003865288.1| proteasome beta 5 subunit, putative [Leishmania donovani]
gi|134074125|emb|CAM72867.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
gi|322503525|emb|CBZ38611.1| proteasome beta 5 subunit, putative [Leishmania donovani]
Length = 302
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ G TV A+ ++ ++Y +N L G ++ GWD++ G +Y V G+ ++Q
Sbjct: 167 LRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDQF-GPSLYYVDDKGSRVKQDLF 225
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
GSGS Y YG D +++ ++ E+A L +++ A RDGASGG+V ++ +G ++
Sbjct: 226 SVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYHVHEKGWTK 285
>gi|157876794|ref|XP_001686739.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
gi|68129814|emb|CAJ09120.1| putative proteasome beta 5 subunit [Leishmania major strain
Friedlin]
Length = 302
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ G TV A+ ++ ++Y +N L G ++ GWD++ G +Y V G+ ++Q
Sbjct: 167 LRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDEF-GPSLYYVDDKGSRVKQDLF 225
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
GSGS Y YG D +++ ++ E+A L +++ A RDGASGG+V ++ +G ++
Sbjct: 226 SVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTVYHVHEKGWTK 285
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + + + ++ G+ + A L+ + ++N+ F T +I+GG+D EG
Sbjct: 57 DAQAIVRLLTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGA 116
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + PLGG E+ F GSGS YG + + M EE +L +KA+ A+ RD
Sbjct: 117 KLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDT 176
Query: 132 ASGGVVRTVTINSEGV 147
SG + I EGV
Sbjct: 177 YSGNGISLAVITKEGV 192
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q ++ ++ I+ G+P V AA L+ + N+ F ++VGG D+Y G
Sbjct: 62 DAQQLARLMQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYVQLLVGGIDRY-GP 120
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY V LGG E GSGS + YG + ++EGM+++E L ++A+ A+ RD
Sbjct: 121 SIYSVDALGGASPEDRIVATGSGSPFAYGVLEDRFEEGMSEKECLDLAIRALRSAMKRDS 180
Query: 132 ASGGVVRTVTINSE 145
ASG + V I +
Sbjct: 181 ASGEDISIVVITKD 194
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLL-SYNNKNFLQTGMIVGGWDKYE 70
AD++ +++ R+ ++ ++LG+P V +A+NL +L +Y + +++GG+D
Sbjct: 59 ADAEIIAEQARFIARKYKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGYDD-N 117
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + L G++ E+ + GSGS +G ++ ++ ++ +EA++L KAVS A RD
Sbjct: 118 GPHLFYIDLFGSLSEEKYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRD 177
Query: 131 GASGGVVRTVTI 142
G SG V V I
Sbjct: 178 GFSGEGVDIVVI 189
>gi|321469684|gb|EFX80663.1| hypothetical protein DAPPUDRAFT_303852 [Daphnia pulex]
Length = 276
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIE-QPFAIGGSGS 95
+V A+ L+ + YN K L G+++ GWDK +G +Y V GT Q F++G SGS
Sbjct: 144 SVAAASKLLVNMVYNYKGMGLSMGVMIAGWDK-KGPGLYYVDNDGTRTPGQVFSVG-SGS 201
Query: 96 SYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG D +K +T EEA +L +A+ A RD +SGG++R I S G
Sbjct: 202 LYAYGVLDSGYKPDLTDEEAYELGRRAIYHATYRDASSGGIIRVYHIKSTG 252
>gi|357604314|gb|EHJ64129.1| proteasome subunit beta 7 [Danaus plexippus]
Length = 274
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + V L + G+ V+ AA L++ + + + + +++GG D+ G
Sbjct: 88 AADTEMTTQTVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G++ + P+A GSGS F+ WK M++EE ++LV A++ I D
Sbjct: 147 PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFESRWKPNMSEEEGKKLVRDAIAAGIFNDL 206
Query: 132 ASGGVVRTVTINSEG 146
SG V I S G
Sbjct: 207 GSGSNVDLCVIRSSG 221
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 3/142 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q ++D +R + + TVK A L+ + ++ K + +IVGG+D
Sbjct: 65 ADAQMLADAIREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYDTEP- 123
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + G+I E+ GSGS G ++ ++ ++ EEA L KA+ +AI RD
Sbjct: 124 -RLYNLDYFGSITEEKMTSTGSGSPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDS 182
Query: 132 ASGGVVRTVTINSEGVSRKFYP 153
A+G V + I+S G+ F P
Sbjct: 183 ATGDGVDVIAISSGGIRESFIP 204
>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
gi|302595865|sp|B5IEE5.1|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
Length = 210
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D Q + Y+R ++ + I+ V AA L+ + K F G++VGG+D +G
Sbjct: 58 DLQVLVRYMRAEINLYRIRRKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDS-KGY 116
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
++ + G IE +A GSGS ++YG + WK+ ++ +E LV++ ++ A+ RD A
Sbjct: 117 HVFAIDAAGGAIEDKYASVGSGSLFVYGVLEDRWKDDLSLDEGINLVIRGINAAMRRDAA 176
Query: 133 SGGVVRTVTINSE 145
SG + TI +
Sbjct: 177 SGDGISVATITKD 189
>gi|432328820|ref|YP_007246964.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
gi|432135529|gb|AGB04798.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
Length = 225
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D Q + Y+R ++ + I+ V AA L+ + K F G++VGG+D G
Sbjct: 73 DLQVLVRYMRAEINLYRIRRKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDD-RGY 131
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+Y + G IE +A GSGS ++YG + W + + +E +LV++ ++ A+ RD A
Sbjct: 132 HVYAIDAAGGAIEDKYASVGSGSLFVYGVLEDRWHDDIGLDEGIELVIRGINAAMRRDAA 191
Query: 133 SGGVVRTVTINSE 145
SG + TI E
Sbjct: 192 SGDGISVATITKE 204
>gi|146165617|ref|XP_001015486.2| proteasome, putative [Tetrahymena thermophila]
gi|146145426|gb|EAR95241.2| proteasome, putative [Tetrahymena thermophila SB210]
Length = 297
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ ++ +Q + +V A+ ++ + Y+ +N L G ++ GWD +E
Sbjct: 123 AADCQFWEQYLAIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWD-HE 181
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++Y + G I+ GSGS+Y YG D + ++ +EA +L KA+ A RD
Sbjct: 182 GAQLYYLDNDGQRIKGNIFSCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRD 241
Query: 131 GASGGVVRTVTINS 144
SGGVVR +++
Sbjct: 242 AGSGGVVRIYHVHA 255
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D EG IY + G+I+E+ + + GSGS Y G +Q + E
Sbjct: 134 NFLRSGGFYIVQPILGGVDD-EGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSE 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ +EA ++ KA+ A+ RD ASG + + +GV
Sbjct: 193 DLSIDEAREVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|209875265|ref|XP_002139075.1| proteasome subunit beta type 5 precursor [Cryptosporidium muris
RN66]
gi|209554681|gb|EEA04726.1| proteasome subunit beta type 5 precursor, putative [Cryptosporidium
muris RN66]
Length = 279
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD + H ++ Q +V A+NL+ + ++ +N+ L G+++ G+DK
Sbjct: 117 AADCSYWERVLAKLCRLHELRNKQRISVAGASNLIANIFFHYRNYGLSAGIMISGYDK-N 175
Query: 71 GGKIYGVPLGGTIIE-QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G ++Y V G ++ F+IG SGS Y G D +T E+A +L +A++ A R
Sbjct: 176 GPQLYYVDNSGARVKGNRFSIG-SGSVYAIGVLDSVHHFDLTDEDAIELGRRAITHATYR 234
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
DG SGG+VR I S+G D L ++ E N
Sbjct: 235 DGGSGGLVRVYQITSQGYKVHISGQDASELHYKYAEESN 273
>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595829|sp|B1L6S7.1|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 206
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AD Q + + VR +++ +P +V+ +A L LL FL +IVGG D+ EG
Sbjct: 55 ADGQYLVNNVRTIADLYSLDTERPLSVRGIARILAFLLRRYRPYFLLAQLIVGGVDR-EG 113
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V GT+ E+ + GSGS + + M +E A +LV+ +++ A++RD
Sbjct: 114 AHLFNVDPFGTLTEEDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDA 173
Query: 132 ASGGVVRTVTINSEGVS 148
A+G + V I+ GV+
Sbjct: 174 ATGDGIDVVVIDDRGVN 190
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG+D EG IY + G+I+E+ + + GSGS Y G +Q +
Sbjct: 134 NFLRSGAFYIVQPILGGFDD-EGAHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYSN 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ EEA+ +A+ A+ RD ASG + + +GV
Sbjct: 193 DLSIEEAKTTAARAIKSAVERDLASGNGINVCVVTEDGV 231
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ G IY + G+I+E+ + + GSGS Y G +Q +++
Sbjct: 134 NFLRSGGFYVVQPILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFED 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
G++ +EA+Q+ KA+ A+ RD ASG + + +GV
Sbjct: 193 GLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|258574735|ref|XP_002541549.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
gi|237901815|gb|EEP76216.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
Length = 283
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ L+ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T+EEA L +++ A+ RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALSLGRRSILAAMHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
SGG V + EG + + W E+LE
Sbjct: 237 AYSGGSVNLYHVKEEGWVKHGFSDMNPIFWKEKLE 271
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 55 NFLQTG------MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ G IY + G+I+E+ + + GSGS Y G +Q +++
Sbjct: 134 NFLRSGGFYVVQPILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFED 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
G++ +EA+Q+ KA+ A+ RD ASG + + +GV
Sbjct: 193 GLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|427787733|gb|JAA59318.1| Putative 20s proteasome regulatory subunit beta type [Rhipicephalus
pulchellus]
Length = 278
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 16 QTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKI 74
+ +++ R + ++ ++ A K+ AN++ YN K L G+++ GWDK G +
Sbjct: 130 RVLAERCRIYELRNRERISVAAASKLLANIL----YNYKGMGLSLGVMICGWDK-RGPGL 184
Query: 75 YGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG 134
Y V G + GSGS+Y YG D + M+ E+A +L KA+ A RD ASG
Sbjct: 185 YYVDNEGNRLSGSLYSCGSGSTYAYGILDNGYSYDMSDEDAFELARKAIFHATFRDSASG 244
Query: 135 GVVRTVTINSEGVSR 149
G+VR + G R
Sbjct: 245 GIVRVYRVKETGWER 259
>gi|219567032|dbj|BAH05034.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|224473817|gb|ACN49158.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 273
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG +Y V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGVYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
T + GSG+SY YG D +KE MT EEA +L + ++ A RD SGGVV
Sbjct: 188 TRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEEAYELGRRGIAHATHRDSYSGGVVNLYH 247
Query: 142 INSEG 146
I +G
Sbjct: 248 IKEDG 252
>gi|326428157|gb|EGD73727.1| proteasome subunit beta type-7 [Salpingoeca sp. ATCC 50818]
Length = 272
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V++ V L H ++ G+ + V A L++ Y + + +++GG D G
Sbjct: 80 AADTEMVTNLVSSQLELHRLETGRQSRVITALRLLKQRLYRYQGHISAALVLGGVD-VSG 138
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G+ + PF GSGS G F+ +K+ M +EA+QLV A++ I D
Sbjct: 139 PVLYSIYPHGSTDKLPFVTMGSGSLAAMGVFEARYKKDMELDEAKQLVRDAIAAGIFNDL 198
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
SG V I +GV P D E LE
Sbjct: 199 GSGSNVDLCVITKDGVDY-IRPHDEANKKGERLE 231
>gi|195129621|ref|XP_002009254.1| GI11352 [Drosophila mojavensis]
gi|193920863|gb|EDW19730.1| GI11352 [Drosophila mojavensis]
Length = 270
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H + + V A N+++ + + + + +++GG DKY G
Sbjct: 88 AADTEMTTDLISSQLELHRLNTERQVPVVCANNILKQMLFRYQGHISAALVLGGVDKY-G 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK +++EE ++LV A++ I D
Sbjct: 147 PHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGIFNDL 206
Query: 132 ASGGVVRTVTINSE 145
SG V I +
Sbjct: 207 GSGSNVDLCVIRKD 220
>gi|302788093|ref|XP_002975816.1| hypothetical protein SELMODRAFT_150796 [Selaginella moellendorffii]
gi|300156817|gb|EFJ23445.1| hypothetical protein SELMODRAFT_150796 [Selaginella moellendorffii]
Length = 270
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D VR L H G+ + V A +++ +N + + +++GG+D G
Sbjct: 87 AADTEAVTDMVRTQLELHRYATGRGSRVITALTMLKSHLFNYQGHVSAALVLGGFD-VSG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ ++E MTKEE LV A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFEAGFREKMTKEEGMSLVSDAICAGIFNDL 205
Query: 132 ASGGVVRTVTINSEG 146
SG V I G
Sbjct: 206 GSGSNVDLCVITKAG 220
>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 201
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEG 71
AD Q+V ++ ++ ++ +P ++ N V L+ + ++ ++ I+GG D EG
Sbjct: 51 ADLQSVLSFLTLRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y GT+ ++ + GSGS Y G + ++E M+ E+A L +KAV AI D
Sbjct: 111 AVLYMADWLGTVTKERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIKAVKAAIRNDP 170
Query: 132 ASG-GVVRTVTINSEGVSRKF 151
SG G+ V EG R F
Sbjct: 171 GSGEGIDVVVITKREGFRRVF 191
>gi|315518887|dbj|BAJ51776.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG +Y V G
Sbjct: 97 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGVYYVDDNG 152
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
T + GSG+SY YG D +KE MT EEA +L + ++ A RD SGGVV
Sbjct: 153 TRLSGRMFSTGSGNSYAYGVLDSGYKEDMTVEEAYELGRRGIAHATHRDSYSGGVVNLYH 212
Query: 142 INSEG 146
I +G
Sbjct: 213 IKEDG 217
>gi|67484636|ref|XP_657538.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56474796|gb|EAL52153.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407035899|gb|EKE37917.1| proteasome subunit beta type 7-B precursor, putative [Entamoeba
nuttalli P19]
gi|449709791|gb|EMD48990.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 262
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD ++++ L H +GQ V A +++ + + ++VGG+D Y G
Sbjct: 76 AADLTHATNFIATKLGVHRFTIGQMPRVDTAVTMLKRHLFPYGGHIGAYLVVGGYD-YTG 134
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++GV G+ + + GSGS D W E +T+EE +L +A+ I D
Sbjct: 135 AHLWGVYADGSTSQHNYYSLGSGSIAATTMLDDQWNENLTREEGVKLATQAILAGIFNDM 194
Query: 132 ASGGVVRTVTINSEGVSRKF---YPGD 155
SGG V I+ GV K +P D
Sbjct: 195 GSGGRVNVCVIDKNGVEEKLNIEHPND 221
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q ++ ++ + +TI+ + TVK A LV L + + F +++GG DK G
Sbjct: 60 DAQFLARLIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDK-TGA 118
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
KIY + P+GG I E GSGS YG + +++ + +EA +L ++A+ A+ RD
Sbjct: 119 KIYSIDPIGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDS 178
Query: 132 ASGGVVRTVTINSE 145
ASG + V I +
Sbjct: 179 ASGDGIDVVKITEK 192
>gi|302783991|ref|XP_002973768.1| hypothetical protein SELMODRAFT_149251 [Selaginella moellendorffii]
gi|300158806|gb|EFJ25428.1| hypothetical protein SELMODRAFT_149251 [Selaginella moellendorffii]
Length = 269
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D VR L H G+ + V A +++ +N + + +++GG+D G
Sbjct: 86 AADTEAVTDMVRTQLELHRYATGRGSRVITALTMLKSHLFNYQGHVSAALVLGGFD-VSG 144
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ ++E MTKEE LV A+ I D
Sbjct: 145 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFEAGFREKMTKEEGMSLVSDAICAGIFNDL 204
Query: 132 ASGGVVRTVTINSEG 146
SG V I G
Sbjct: 205 GSGSNVDLCVITKAG 219
>gi|448738995|ref|ZP_21721015.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
gi|445800809|gb|EMA51157.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
Length = 232
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
VR + + + A + ANL+R + NF ++GG D EG IY + GG
Sbjct: 101 VRLYETRRDTAMSLNALANLTANLLR-----SGNFQIVQPVLGGVDD-EGAHIYSIGPGG 154
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+++E+ +A GSGS + G + + E + ++AE +AV A RD ASG + T
Sbjct: 155 SVMEETYAASGSGSPFALGVLEGEYDEEASVDDAETTAARAVQSATERDTASGNGLSLAT 214
Query: 142 INSEGVSRKFY 152
I EGV Y
Sbjct: 215 ITDEGVDIDSY 225
>gi|146216735|gb|ABQ10568.1| proteasome beta 9 subunit [Ailuropoda melanoleuca]
Length = 49
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 86 QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG 134
QPFAIGGSGS+Y+YG+ D A+K GM+ EE A++LA+ RDG+SG
Sbjct: 1 QPFAIGGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAITLAMNRDGSSG 49
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 49 LSYNNKNFLQTG------MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFF 102
LS N L++G ++GG D EG IY + G E+ +A+ GSGS + G
Sbjct: 126 LSTLTSNLLRSGGFFIVVPVLGGVDD-EGPHIYSMDALGGTTEETYAVSGSGSQFALGVL 184
Query: 103 DQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
+Q ++EG++ EEA + +++V A+ RD ASG + T+ EGV
Sbjct: 185 EQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGINIATVTEEGV 229
>gi|384250069|gb|EIE23549.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 269
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+ + L H G+ + V A +++ + + + +++GG D + G
Sbjct: 80 AADTENVTGMISSSLELHRYATGRGSRVITALTMLKTHLFKYQGHVSAALVLGGVD-FNG 138
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ P+ GSGS F+ +KE +TKEE +LV +A+ I D
Sbjct: 139 PHLFTVYPHGSTDSLPYCTMGSGSLNAMAVFEDGYKEDLTKEEGMELVARAIRSGIFNDL 198
Query: 132 ASGGVVRTVTINSEGV--------------SRKF---YPGDTLPLWHEEL 164
SG V I +GV RKF YP T P+ E+L
Sbjct: 199 GSGSNVDLCIITKDGVEYLRNYQRLQDKTYERKFPVKYPAGTAPVVKEKL 248
>gi|440299623|gb|ELP92175.1| proteasome subunit beta type-7-A precursor, putative [Entamoeba
invadens IP1]
Length = 262
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD V++++ L H + G VK A + + + L +++GG+D G
Sbjct: 76 AADLTHVTNFIATKLGVHGLTTGTFPRVKTAVTMFKRHLFQYGGHLGVYLVLGGYD-CTG 134
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+YG+ G EQ + GSGS D W EG+T EE L A+ I D
Sbjct: 135 AHLYGLMANGYTSEQHYYSLGSGSVAATTILDDGWNEGLTIEEGAALAQHAIEAGILNDM 194
Query: 132 ASGGVVRTVTINSEGVSRKFY 152
SG VR I +GV + +
Sbjct: 195 GSGSRVRVCIITKDGVDERLH 215
>gi|297801524|ref|XP_002868646.1| hypothetical protein ARALYDRAFT_493925 [Arabidopsis lyrata subsp.
lyrata]
gi|297314482|gb|EFH44905.1| hypothetical protein ARALYDRAFT_493925 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ +N + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFNYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|116791005|gb|ABK25819.1| unknown [Picea sitchensis]
Length = 273
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ Y+ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLELHRYATGRESRVVTALTLLKSHLYSYQGHVSAALVLGGVD-CTG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ ++EGMT+EE +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESRYREGMTREEGIKLVCQAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDVCVIT 218
>gi|211939903|gb|ACJ13432.1| proteasome subunit beta 7 [Helicoverpa armigera]
Length = 281
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + V L + G+ V+ AA L++ + + + ++ +++GG D+ G
Sbjct: 88 AADTEMTTQTVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGYIGAALVLGGVDR-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G++ + P+A GSGS F+ WK M +EE ++LV A++ I D
Sbjct: 147 PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKPNMNEEEGKKLVRDAIAAGIFNDL 206
Query: 132 ASGGVVRTVTINSEG 146
SG V I G
Sbjct: 207 GSGSNVDLCVICGTG 221
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 26 LHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTII 84
+ +++ G+PATV+ A + L Y+ K F IVGG D K+Y + G+II
Sbjct: 68 MRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLGSII 127
Query: 85 EQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG 134
E+ + G+G++ +G + +K GM+ EEA++ V+A+ ++ARD +G
Sbjct: 128 EEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTG 177
>gi|124487727|gb|ABN11951.1| putative proteasome 2 subunit [Maconellicoccus hirsutus]
Length = 236
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+ V+ + L H + G+ V VA +++ + + + + +I+GG DK G
Sbjct: 87 AADTVQVTSMISSNLELHRLNSGRTVPVVVACTMLKQMLFRYQGHIGAALIIGGVDK-TG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G+ + P+ GSGS F+ WK +T+EEA++LV + ++ I D
Sbjct: 146 SHLYSIHPHGSSDKLPYTTMGSGSLAAMAVFESKWKPDLTEEEAKELVKEGIAAGIFNDL 205
Query: 132 ASGGVVRTVTINSEGV 147
SG V I + V
Sbjct: 206 GSGSNVDLCVIRKDTV 221
>gi|308162461|gb|EFO64857.1| Proteasome subunit beta type 9 precursor [Giardia lamblia P15]
Length = 221
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQL-----GQPATVKVAANLVRLLSYNNKNFLQTGMIVGG 65
+ +Q + + VR L + L G V AAN++ + + + FL I+GG
Sbjct: 73 SVSHAQFLVNEVRAHLMTQQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILGG 132
Query: 66 WDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 125
D G +GG+++E+ ++I GSG ++ G + + +T+ EA L K +
Sbjct: 133 VDN-TGFHCINSMIGGSVLEEDYSISGSGGVFIKGLMKELYNPELTRAEAINLAHKLLKT 191
Query: 126 AIARDGASGGVVRTVTINSEGVSRK 150
AI+ D SGG +R V I G++ +
Sbjct: 192 AISLDTKSGGFMRFVAIEQGGLAEE 216
>gi|255570177|ref|XP_002526049.1| proteasome subunit beta type 7,10, putative [Ricinus communis]
gi|223534630|gb|EEF36326.1| proteasome subunit beta type 7,10, putative [Ricinus communis]
Length = 278
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + ++Q +++GG D G
Sbjct: 89 AADTEAVTDMVSSQLQLHRYHTGRESRVITALTLLKKHLFNYQGYVQAALVLGGVD-CTG 147
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ ++EG+ ++E +LV +A+ + D
Sbjct: 148 PHLHTIYPHGSTDTLPFATMGSGSLAAMAIFESKYREGLNRDEGIKLVTEAICSGVFNDL 207
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 208 GSGSNVDVCVIT 219
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 29 HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQP 87
+ +G+P +VK A L+ + K F +VGG+D E +++ V + G + E
Sbjct: 42 YKANVGKPMSVKALATLLANILNGTKYFPYFVWFLVGGYD--EEPRMFSVDMAGGVTEDK 99
Query: 88 FAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
+ GSG + Y D +KE ++ +E +L VKA+++AI RD SG + VTI EG
Sbjct: 100 YVAAGSGMEFAYSVLDSEYKEDLSVKEGIKLAVKAINVAIKRDVFSGDGILVVTITREG 158
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 14 DSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKY 69
D+Q + VR + + + ++ G+ + + A L+ + ++++ F T +I+GG+D
Sbjct: 57 DAQAI---VRALIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLT 113
Query: 70 EGGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
+G K++ + PLGG E+ F GSGS YG + + M+ EE +L +KA+ A+
Sbjct: 114 DGPKLFSLDPLGGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAME 173
Query: 129 RDGASGGVVRTVTINSEGV 147
RD SG V I EGV
Sbjct: 174 RDTYSGNGVSVAVITKEGV 192
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQT-GMIVGGWDKYEG 71
AD Q + ++ ++ Q +P ++ N + L+ + ++ ++ I+GG D+ EG
Sbjct: 51 ADLQNILSFLTVRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V GT+ ++ + GSGS Y G + ++ +T EEA L + A+ AI D
Sbjct: 111 AVMYMVDWLGTVTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDP 170
Query: 132 ASGGVVRTVTINS-EGVSRKF 151
SG + VTI EG R F
Sbjct: 171 GSGEGIDVVTITKREGFKRIF 191
>gi|389608763|dbj|BAM17993.1| proteasome beta2 subunit [Papilio xuthus]
Length = 281
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + V L + G+ V+ A+ L++ + + + ++ +++GG D+ G
Sbjct: 88 AADTEMTTQTVASQLELQRLHTGRTVPVETASTLLKRMLFRYQGYIGAALVLGGVDR-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G++ + P+A GSGS F+ WK +++EE ++LV A++ I D
Sbjct: 147 PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFESGWKPNLSEEEGKKLVRDAIAAGIFNDL 206
Query: 132 ASGGVVRTVTINSEG 146
SG V I + G
Sbjct: 207 GSGSNVDLCVIRNSG 221
>gi|223997434|ref|XP_002288390.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975498|gb|EED93826.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 70
AAD+Q ++ +R L + TV AA+L R L N N L +I G+D
Sbjct: 62 SAADTQHLASVIRTELVARQLLYRIRGTVSHAASLSRNLLVNEPN-LSASLICAGYDHVL 120
Query: 71 G-GKIYGVPLGGTIIEQ-PFAIGGSGSSYLYGFFDQ---AWKEGMTKEEAE------QLV 119
G G IY + GGT+ E+ +A GGSGSSY+ G D ++ G + E V
Sbjct: 121 GRGVIYTISPGGTVFEERAWAAGGSGSSYILGHLDSFNPRYERGGSNLLLESEEEALDFV 180
Query: 120 VKAVSLAIARDGASGGVVRTVTINSEG 146
A+ LA+ RDG+SGG R I+ G
Sbjct: 181 CNAIGLAMDRDGSSGGFARMYVIDRCG 207
>gi|302825012|ref|XP_002994143.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
gi|300138019|gb|EFJ04804.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
Length = 275
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ Y+ + L G ++ GWD+
Sbjct: 104 AADCQFWQRNLGTRCRLHELANKRRISVAGASKLLANTLYSYRGMGLSMGTMIAGWDETG 163
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
Y GG F++G SGS+Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 164 PALFYVDSEGGRTKGTLFSVG-SGSTYAYGILDSGYKYEMSVEEAVELGRRAIYHATFRD 222
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMN 183
GASGGV I +G K GD + H + P S +V +PM
Sbjct: 223 GASGGVASVYHIGPQGW--KKISGDDVSELHYQYYPPESQASAPDVVEEQPMQ 273
>gi|315518857|dbj|BAJ51757.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 273
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSG+SY YG D +KE MT EEA +L + ++ A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEEAYELGRRGIAHATHRDSYSGGVVNLYH 247
Query: 142 INSEG 146
I +G
Sbjct: 248 IQEDG 252
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q++ ++ + +Q G+P TV+ +L+ + + + F +++GG DK +G
Sbjct: 30 DAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSNVLASRRYFPFMVQLLLGGVDK-KGP 88
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + LGG+I EQ GSGS YG + + MT EE +L V+A+ A+ RD
Sbjct: 89 QLFSLDALGGSIQEQKVVATGSGSPTAYGVLEALYDPEMTVEEGMKLGVRAIHNAMKRDS 148
Query: 132 ASGGVVRTVTINSEG 146
ASG V++ V I + G
Sbjct: 149 ASGDVIQAVKITAGG 163
>gi|189310927|gb|ACD87645.1| 20S proteasome B2 subunit [Anastrepha suspensa]
Length = 280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H + G+ V A L++ + + + +++GG DK G
Sbjct: 88 AADTEMTTDLIASQLEMHRLNTGRQVPVVAANTLLKQFLFRYQGHISAALVLGGVDK-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ P+A GSGS F+ W MT+EE + LV A++ + D
Sbjct: 147 SYIYCIHPHGSTDRLPYATMGSGSLAAMSVFESRWTPDMTEEEGKLLVRDAIAAGVFNDL 206
Query: 132 ASGGVVRTVTINSEGV-----------------SRKFYPGDTLPLWHEELEP 166
SG + I + V + F PG T + EE+ P
Sbjct: 207 GSGSNIDLCVIRKDSVDYLRNYELANLKGTRHGNYSFMPGTTELIGKEEVFP 258
>gi|321470713|gb|EFX81688.1| hypothetical protein DAPPUDRAFT_303318 [Daphnia pulex]
Length = 277
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIE-QPFAIGGSGS 95
+V A+ L+ + YN K L G+++ GWDK +G +Y V GT Q F++G SGS
Sbjct: 145 SVAAASKLLVNMVYNYKGMGLSMGVMIAGWDK-KGPGLYYVDNDGTRTPGQVFSVG-SGS 202
Query: 96 SYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG D ++ ++ EEA +L +A+ A RD +SGG++R I S G
Sbjct: 203 LYAYGVLDSGYRNDLSDEEAYELGRRAIYHATYRDASSGGIIRVYHIKSTG 253
>gi|145353826|ref|XP_001421201.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581438|gb|ABO99494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV--RLLSYNNKNFLQTGMIVGGWDKY 69
AAD Q + H ++ G+ TV+ A+ L+ L SY K L G +V GWD
Sbjct: 113 AADCQFWQRNLGIQCRLHELENGKRITVRAASKLLANTLYSYKGKG-LSMGTMVAGWD-L 170
Query: 70 EGGKIYGVPLGGTIIE-QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
G +Y V GT ++ Q F++G SGS + YG DQ +K +T EEA +L +A+ A
Sbjct: 171 NGPGLYYVDSEGTRLKGQRFSVG-SGSLFAYGVLDQGYKWDLTVEEACELGRRAIYHATF 229
Query: 129 RDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDM 173
RD SGG V + + G ++ GD + H P + D+
Sbjct: 230 RDAFSGGTVSVYHVGANGWTK--VTGDDVGELHFSYYPATPVDDV 272
>gi|119193488|ref|XP_001247350.1| proteasome component [Coccidioides immitis RS]
gi|303312031|ref|XP_003066027.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105689|gb|EER23882.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320040001|gb|EFW21935.1| proteasome component [Coccidioides posadasii str. Silveira]
gi|392863404|gb|EAS35847.2| proteasome component [Coccidioides immitis RS]
Length = 283
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ L+ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T+EEA L +++ A+ RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALNLGRRSILAAMHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
SGG V + +G + + W E+LE
Sbjct: 237 AYSGGFVNLYHVKEDGWVKHGFNDMNPIFWKEKLE 271
>gi|315518855|dbj|BAJ51756.1| proteasome subunit, beta type 8 [Oryzias celebensis]
gi|315518866|dbj|BAJ51763.1| proteasome subunit, beta type 8 [Oryzias matanensis]
gi|315518875|dbj|BAJ51769.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 273
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + +++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNSHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSG +Y YG D +KE MT EEA +L +A+ A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEEAYELGRRAIVHATHRDSYSGGVVNMYH 247
Query: 142 INSEG 146
I +G
Sbjct: 248 IQEDG 252
>gi|114053073|ref|NP_001040536.1| proteasome subunit beta 7 [Bombyx mori]
gi|95102982|gb|ABF51432.1| proteasome subunit beta 7 [Bombyx mori]
Length = 283
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + V L + G+ V+ AA L++ + + + + +++GG D+ G
Sbjct: 88 AADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G++ + P+A GSGS F+ WK M +EE ++LV A++ I D
Sbjct: 147 PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDAIAAGIFNDL 206
Query: 132 ASGGVVRTVTINSEG 146
SG V I + G
Sbjct: 207 GSGSNVDLCVIRNTG 221
>gi|219567042|dbj|BAH05039.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 238
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + +++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 97 CRLYRLRNSHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 152
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSG +Y YG D +KE MT EEA +L +A+ A RD SGGVV
Sbjct: 153 NRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEEAYELGRRAIVHATHRDSYSGGVVNMYH 212
Query: 142 INSEG 146
I +G
Sbjct: 213 IQEDG 217
>gi|302781737|ref|XP_002972642.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
gi|300159243|gb|EFJ25863.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
Length = 277
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ Y+ + L G ++ GWD+
Sbjct: 106 AADCQFWQRNLGTRCRLHELANKRRISVAGASKLLANTLYSYRGMGLSMGTMIAGWDETG 165
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
Y GG F++G SGS+Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 166 PALFYVDSEGGRTKGTLFSVG-SGSTYAYGILDSGYKFEMSVEEAVELGRRAIYHATFRD 224
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMN 183
GASGGV I +G K GD + H + P S +V +PM
Sbjct: 225 GASGGVASVYHIGPQGW--KKISGDDVSELHYQYYPPESQASAPDVVEEQPMQ 275
>gi|217073968|gb|ACJ85344.1| unknown [Medicago truncatula]
Length = 262
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQT-GMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + + G ++ GWD+
Sbjct: 103 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGWDETG 162
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 163 PGLYYVDSEGGRLKGNRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + G RK GD + H P
Sbjct: 222 GASGGVASVYYVGPTG--RKKLSGDDVGELHYHYNP 255
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 55 NFLQTG------MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D +G IY + G+IIE+ + + GSGS Y G +Q + E
Sbjct: 134 NFLRSGGFFIVQPILGGVDD-DGPHIYSIDPAGSIIEEEYTVTGSGSQYALGVLEQQYNE 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ EEA+ + +++ A+ RD ASG + + +GV
Sbjct: 193 DLSIEEAKTVAARSIESAVERDLASGNGINVCVVTEDGV 231
>gi|195378434|ref|XP_002047989.1| GJ11606 [Drosophila virilis]
gi|194155147|gb|EDW70331.1| GJ11606 [Drosophila virilis]
Length = 270
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H + + V A N+++ + + + + +++GG DKY G
Sbjct: 86 AADTEMTTDLISSQLELHRLNTERQVPVVCANNILKQMLFRYQGHISAALVLGGVDKY-G 144
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ W+ +T+EE + LV A++ + D
Sbjct: 145 PHIYSIHPHGSADKLPYATMGSGSLAAMAVFESRWRPDLTEEEGKLLVRDAIASGVFNDL 204
Query: 132 ASGGVVRTVTINSE 145
SG + I +
Sbjct: 205 GSGSNIDLCVIRKD 218
>gi|20260224|gb|AAM13010.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|21387013|gb|AAM47910.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length = 274
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS + F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAVMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|334182541|ref|NP_001184978.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
gi|332190845|gb|AEE28966.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 298
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 130 AADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETG 189
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +++ A RD
Sbjct: 190 PGLYYVDNEGGRLKGDRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRD 248
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + EG ++ GD + H P
Sbjct: 249 GASGGVASVYHVGPEGWTK--LSGDDVGELHYHYYP 282
>gi|403221265|dbj|BAM39398.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 286
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 35 QPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSG 94
QP + LV L + + + Q +I+GG D Y G ++ V G+ PF GSG
Sbjct: 128 QPRVQMCLSMLVHEL-FKYQGYKQCALIIGGVD-YTGPHLFSVSPHGSSDSLPFCTMGSG 185
Query: 95 SSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG-------- 146
S ++ + +GM+ EEA LVVKA+S I D SGG V V ++ EG
Sbjct: 186 SLNAMSVLEEGYFDGMSVEEATNLVVKAISAGITNDLGSGGNVDVVVLDKEGSNHFRTYK 245
Query: 147 --VSRKFYPG-DTLPL 159
R + P D LPL
Sbjct: 246 RVCQRTYAPTEDKLPL 261
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM--- 61
L + + +Q++ +R + + + G+ +++ + LV NFL++G
Sbjct: 91 ALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLV-------GNFLRSGGFYV 143
Query: 62 ---IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQL 118
I+GG D+ G IY + G+I+E+ + + GSGS Y G +Q +++G++ EEA+ +
Sbjct: 144 VQPILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGV 202
Query: 119 VVKAVSLAIARDGASGGVVRTVTINSEGV 147
KA+ A+ RD ASG + + +GV
Sbjct: 203 ATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|297844202|ref|XP_002889982.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
gi|297335824|gb|EFH66241.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 106 AADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +++ A RD
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRD 224
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + EG ++ GD + H P
Sbjct: 225 GASGGVASVYHVGPEGWTK--LSGDDVGELHYHYYP 258
>gi|15222152|ref|NP_172765.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
gi|3914425|sp|O23717.1|PSB5A_ARATH RecName: Full=Proteasome subunit beta type-5-A; AltName: Full=20S
proteasome beta subunit E-1; AltName: Full=Proteasome
component E; AltName: Full=Proteasome epsilon-1 chain;
Flags: Precursor
gi|4850389|gb|AAD31059.1|AC007357_8 Identical to gb|Y13695 multicatalytic endopeptidase complex,
proteasome precursor, beta subunit (prce) from
Arabidopsis thaliana. ESTs gb|Y09360, gb|F13852,
gb|T20555, gb|T44620, gb|AI099779 and gb|AA586183 come
from this gene [Arabidopsis thaliana]
gi|13194776|gb|AAK15550.1|AF348579_1 putative proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|2511596|emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421117|gb|AAC32072.1| 20S proteasome beta subunit PBE1 [Arabidopsis thaliana]
gi|23297641|gb|AAN12998.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|332190844|gb|AEE28965.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 274
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 106 AADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +++ A RD
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRD 224
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + EG ++ GD + H P
Sbjct: 225 GASGGVASVYHVGPEGWTK--LSGDDVGELHYHYYP 258
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM--- 61
L + + +Q++ +R + + + G+ +++ + LV NFL++G
Sbjct: 91 ALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLV-------GNFLRSGGFYV 143
Query: 62 ---IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQL 118
I+GG D+ G IY + G+I+E+ + + GSGS Y G +Q +++G++ EEA+ +
Sbjct: 144 VQPILGGVDET-GPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGV 202
Query: 119 VVKAVSLAIARDGASGGVVRTVTINSEGV 147
KA+ A+ RD ASG + + +GV
Sbjct: 203 ATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|388500262|gb|AFK38197.1| unknown [Medicago truncatula]
Length = 271
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQT-GMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + + G ++ GWD+
Sbjct: 103 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGWDETG 162
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 163 PGLYYVDSEGGRLKGNRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWH---EELEPQNSLLDMMNVASP 179
GASGGV + G RK GD + H + P +M+ A P
Sbjct: 222 GASGGVASVYYVGPTG--RKKLSGDDVGELHYHYNPVTPSTVEQEMVEAAGP 271
>gi|15292875|gb|AAK92808.1| putative proteasome epsilon chain precursor [Arabidopsis thaliana]
Length = 274
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 106 AADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +++ A RD
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRD 224
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + EG ++ GD + H P
Sbjct: 225 GASGGVASVYHVGPEGWTK--LSGDDVGELHYHYYP 258
>gi|359473123|ref|XP_002285417.2| PREDICTED: proteasome subunit beta type-7-B isoform 2 [Vitis
vinifera]
Length = 267
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ ++ + ++Q +++GG D G
Sbjct: 82 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKSHLFSYQGYVQAALVLGGVD-CTG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ + EG+T+EE LV +A+ I D
Sbjct: 141 PHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESKYHEGLTREEGINLVSEAICSGIFNDL 200
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 201 GSGSNVDVCVIT 212
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKY 69
+ AD+QT+ D ++ ++ + I GQ ++ A L L ++++ F +I+ G D
Sbjct: 64 RVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDN- 122
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
EG +Y + G++ E+ GSGS YG + ++E M A +L +AVS AI R
Sbjct: 123 EGPHLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRR 182
Query: 130 DGASGGVV 137
D SG V
Sbjct: 183 DAGSGDSV 190
>gi|449492703|ref|XP_004159076.1| PREDICTED: proteasome subunit beta type-7-A-like [Cucumis sativus]
Length = 273
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ ++ + ++ +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFSYQGYVSAALVLGGVD-VTG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTRDEGIRLVTEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDVCVIT 218
>gi|225424598|ref|XP_002285415.1| PREDICTED: proteasome subunit beta type-7-B isoform 1 [Vitis
vinifera]
gi|296081387|emb|CBI16820.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ ++ + ++Q +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKSHLFSYQGYVQAALVLGGVD-CTG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ + EG+T+EE LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESKYHEGLTREEGINLVSEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDVCVIT 218
>gi|328768690|gb|EGF78736.1| hypothetical protein BATDEDRAFT_17403 [Batrachochytrium
dendrobatidis JAM81]
Length = 248
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + L H++Q G+ V A +++ + + + + +++GG+D G
Sbjct: 65 AADTEFTTALISSKLELHSLQTGREPRVVTAMTMLKQMLFKYQGHIGAALVLGGYD-VNG 123
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + G+ + PF GSGS F+ W+ M +EEA Q+V A+ I D
Sbjct: 124 PQLYTIAPHGSTDKLPFVTMGSGSLAAMAVFEAGWRANMNREEAVQIVCDAIEAGIFNDL 183
Query: 132 ASGGVVRTVTI--------------NSEGVSRKFY---PGDTLPL 159
SG V I N GV + Y PG T L
Sbjct: 184 GSGSNVDVTVITKGSVDYMRNYRRPNDRGVKEQSYKVRPGTTATL 228
>gi|121699289|ref|XP_001267971.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
gi|119396113|gb|EAW06545.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
Length = 296
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y+ K L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYSYKGMGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA QL +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALQLGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 285
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKY 69
+ AD+QT+ D ++ ++ + I GQ ++ A L L ++++ F +I+ G D
Sbjct: 61 RVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDN- 119
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
EG +Y + G++ E+ GSGS YG + ++E M A +L +AVS AI R
Sbjct: 120 EGPHLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRR 179
Query: 130 DGASGGVV 137
D SG V
Sbjct: 180 DAGSGDSV 187
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 11 QAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKY 69
+ AD+QT+ D ++ ++ + I GQ ++ A L L ++++ F +I+ G D
Sbjct: 61 RVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDN- 119
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
EG +Y + G++ E+ GSGS YG + ++E M A +L +AVS AI R
Sbjct: 120 EGPHLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRR 179
Query: 130 DGASGGVV 137
D SG V
Sbjct: 180 DAGSGDSV 187
>gi|2055313|dbj|BAA19767.1| LMP7 [Oryzias latipes]
Length = 225
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 84 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 139
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 140 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYH 199
Query: 142 INSEG 146
I +G
Sbjct: 200 IQEDG 204
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
D+Q + + + ++ + T+K + L LLS L ++VGG+DK+ G
Sbjct: 60 DAQQIVRIISVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQLLVGGYDKH-GP 118
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + LGG I E+ GSGS YG + +KE MT +E +L V+A+ A+ RD
Sbjct: 119 ELYSIDALGGNIDEKRVVATGSGSPIAYGVLEDRYKENMTTQEGVELAVRALHNAMKRDS 178
Query: 132 ASGGVVRTVTINSEGVSR 149
ASG + V I + +R
Sbjct: 179 ASGDGIDVVIITKDQFTR 196
>gi|62122596|dbj|BAD93264.1| PSMB8-A [Oryzias latipes]
Length = 273
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYH 247
Query: 142 INSEG 146
I +G
Sbjct: 248 IQEDG 252
>gi|219362877|ref|NP_001136700.1| uncharacterized protein LOC100216834 [Zea mays]
gi|194696688|gb|ACF82428.1| unknown [Zea mays]
gi|414884114|tpg|DAA60128.1| TPA: proteasome subunit beta type isoform 1 [Zea mays]
gi|414884115|tpg|DAA60129.1| TPA: proteasome subunit beta type isoform 2 [Zea mays]
gi|414884116|tpg|DAA60130.1| TPA: proteasome subunit beta type isoform 3 [Zea mays]
Length = 273
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ + + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGGVD-CTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ +KEG+T+EE QLV +A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|21593337|gb|AAM65286.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length = 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKXLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|218197607|gb|EEC80034.1| hypothetical protein OsI_21721 [Oryza sativa Indica Group]
Length = 277
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + ++ A+ L+ + Y+ + L G ++ GWD+
Sbjct: 109 AADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKG 168
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y G ++ F++G SGS Y YG D+ ++ M EEA +L +A+ A RD
Sbjct: 169 PGLYYVDSEGARLMGSRFSVG-SGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRD 227
Query: 131 GASGGVVRTVTINSEGVSR-----------KFYPGDTLPLWHE 162
GASGG V + G ++ K+YP + +P+ E
Sbjct: 228 GASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEAIPVEQE 270
>gi|66810508|ref|XP_638961.1| proteasome subunit beta type 7 [Dictyostelium discoideum AX4]
gi|74897083|sp|Q54QR2.1|PSB7_DICDI RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
gi|60467585|gb|EAL65606.1| proteasome subunit beta type 7 [Dictyostelium discoideum AX4]
Length = 266
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD+++ + + L H + G+ V A +++ + + + + +I+GG D G
Sbjct: 83 AADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISAALILGGID-ING 141
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ + P+ GSGS F+ +K MTKEEA LV +A+S I D
Sbjct: 142 PSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDL 201
Query: 132 ASGGVVRTVTINSEGVS----------RKF------YPGDTLPLWHEELEP 166
SG V I GV+ RKF + T P+ +++ P
Sbjct: 202 GSGSNVDVTVIEPSGVTVLRNYQTPNERKFRNNPYIFKQGTTPVLKQDIAP 252
>gi|443900017|dbj|GAC77344.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Pseudozyma antarctica T-34]
Length = 745
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y K L G ++ GWDK
Sbjct: 447 AADCQYWETYLGIQCRLHELRNKERISVAAASKYLSNLVYGYKGMGLSMGTMICGWDK-T 505
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS++ YG DQ +K +T +EA++L +++ A RD
Sbjct: 506 GPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLDQGYKWDLTDDEAQELGRRSIYAAAHRD 565
Query: 131 GASGGVVRTVTINSEG--------VSRKFY--PGDTLP 158
SG V + +G VS+ Y PGD +P
Sbjct: 566 AYSGNTVNLYHVREDGWEFIDNYDVSKLHYDGPGDHVP 603
>gi|426199921|gb|EKV49845.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 311
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y+ K L G ++ GWDK
Sbjct: 132 AADCQFWETYLGMHCRLHELRNRERISVSAASKYLSNLVYSYKGMGLSMGTMICGWDK-T 190
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS++ YG DQ ++ +T EEA++L +++ A RD
Sbjct: 191 GPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQELGRRSIFAAGHRD 250
Query: 131 GASGGVVRTVTINSEG--------VSRKFY--PGD 155
SG + EG +S+ +Y PGD
Sbjct: 251 AMSGNTCNLYHVKEEGWDFIGNYDISKMYYEGPGD 285
>gi|226503297|ref|NP_001149857.1| LOC100283485 [Zea mays]
gi|194702548|gb|ACF85358.1| unknown [Zea mays]
gi|195612088|gb|ACG27874.1| proteasome subunit beta type 7-A precursor [Zea mays]
gi|195635121|gb|ACG37029.1| proteasome subunit beta type 7-A precursor [Zea mays]
gi|413942586|gb|AFW75235.1| proteasome subunit beta type isoform 1 [Zea mays]
gi|413942587|gb|AFW75236.1| proteasome subunit beta type isoform 2 [Zea mays]
gi|413942588|gb|AFW75237.1| proteasome subunit beta type isoform 3 [Zea mays]
Length = 273
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ + + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFKYQGHVSAALVLGGVD-CTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ +KEG+T+EE Q+V +A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQIVCEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|409082095|gb|EKM82453.1| hypothetical protein AGABI1DRAFT_111072 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 311
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y+ K L G ++ GWDK
Sbjct: 132 AADCQFWETYLGMHCRLHELRNRERISVSAASKYLSNLVYSYKGMGLSMGTMICGWDK-T 190
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS++ YG DQ ++ +T EEA++L +++ A RD
Sbjct: 191 GPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQELGRRSIFAAGHRD 250
Query: 131 GASGGVVRTVTINSEG--------VSRKFY--PGD 155
SG + EG +S+ +Y PGD
Sbjct: 251 AMSGNTCNLYHVKEEGWDFIGNYDISKMYYEGPGD 285
>gi|219567040|dbj|BAH05038.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 97 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 152
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 153 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYH 212
Query: 142 INSEG 146
I +G
Sbjct: 213 IQEDG 217
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ +G IY + G+I+E+ + + GSGS Y G +Q + +
Sbjct: 134 NFLRSGAFYVVQPILGGVDE-DGPHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYND 192
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ +EA+ + +AV A+ RD ASG + + +GV
Sbjct: 193 ALSIDEAKTVAARAVKSAVERDLASGNGINICVVTEDGV 231
>gi|302672727|ref|XP_003026051.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
gi|300099731|gb|EFI91148.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
Length = 274
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C AAD++ ++ + + H + G+ V A +++ + + + + +
Sbjct: 78 NIRCCGA-GTAADTEFTTNLIASNVEMHALTTGRTPRVVTAMTMLKQMLFRYQGHVGAAL 136
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
++GG D G ++ V G+ + P+ GSGS F+ WK+ MT+EEA LV
Sbjct: 137 VLGGVDP-TGAHLFTVAPHGSTDKLPYVTMGSGSLAAMAVFETGWKKDMTREEALALVTA 195
Query: 122 AVSLAIARDGASGGVVRTVTINSEGV 147
A+S I D SG V I +G
Sbjct: 196 AISAGIFNDLGSGSNVDACVITKDGT 221
>gi|448391971|ref|ZP_21567066.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
gi|445665383|gb|ELZ18061.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
Length = 267
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
L L+ +Q+ +R ++ + + G+P ++ A L + F I+G
Sbjct: 115 ALTLVGSVGGAQSFIRTLRSEVNLYESRRGEPMPIEALATLAGNFARGGP-FRAINPILG 173
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G D EG +Y + G ++E + + GSG YG +Q ++EG++ EEA+ + +A+
Sbjct: 174 GVDA-EGNHVYSIDPAGGVMEDDYTVTGSGMQLAYGLLEQEYEEGLSLEEAQSVAARAIE 232
Query: 125 LAIARDGASGGVVRTVTINSEGV 147
A+ RD SG V + EGV
Sbjct: 233 SAVERDTGSGNGVFLAAVTDEGV 255
>gi|195642050|gb|ACG40493.1| proteasome subunit beta type 7-A precursor [Zea mays]
Length = 273
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ + + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFKYQGHVSAALVLGGVD-CTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ +KEG+T+EE Q+V +A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQIVCEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q++ + H ++ G T L+ + + N+++ L T +I+GG+D G
Sbjct: 65 DAQSLIRIISAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGA 124
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + P+GG E F GSGS YG + ++ +T ++ + VKA+S A+ RD
Sbjct: 125 KLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDA 184
Query: 132 ASGGVVRTVTINSEGVSRKFYP 153
SG + IN +GV K Y
Sbjct: 185 YSGNGISLAHINKDGV--KLYS 204
>gi|219567062|dbj|BAH05049.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGITHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQT-GMIVGGWDKYEG 71
AD Q + ++ ++ Q +P ++ N + L+ + ++ ++ I+GG D+ EG
Sbjct: 51 ADLQNILSFLTVRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEG 110
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V GT+ ++ + GSGS Y G + ++ +T EEA L + A+ AI D
Sbjct: 111 AVMYMVDWLGTVTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDP 170
Query: 132 ASGGVVRTVTINS-EGVSRKF 151
SG + VTI +G R F
Sbjct: 171 GSGEGIDVVTITKRDGFKRIF 191
>gi|224140867|ref|XP_002323800.1| predicted protein [Populus trichocarpa]
gi|118484467|gb|ABK94109.1| unknown [Populus trichocarpa]
gi|222866802|gb|EEF03933.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVD-CTG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG++++E +LV +AV I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESKYKEGLSRDEGIKLVSEAVCSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDVCVIT 218
>gi|348539958|ref|XP_003457456.1| PREDICTED: proteasome subunit beta type-5-like [Oreochromis
niloticus]
Length = 271
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + Y K L G +V GWDK G Y G + FA+G SGS
Sbjct: 143 SVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVG-SGSM 201
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
Y YG D + +T EEA +L +A+ A RD SGG V ++SEG +R D
Sbjct: 202 YAYGVMDSGVRHDLTVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTR-ISQDDV 260
Query: 157 LPLWHE 162
L L H+
Sbjct: 261 LVLHHQ 266
>gi|356501624|ref|XP_003519624.1| PREDICTED: proteasome subunit beta type-7-B-like [Glycine max]
gi|356552635|ref|XP_003544669.1| PREDICTED: proteasome subunit beta type-7-B-like isoform 1 [Glycine
max]
gi|356552637|ref|XP_003544670.1| PREDICTED: proteasome subunit beta type-7-B-like isoform 2 [Glycine
max]
Length = 271
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE ++++E +LVV+A+ I D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGIKLVVEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|255948078|ref|XP_002564806.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591823|emb|CAP98078.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 296
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K + L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D +K +T+EEA L +A+ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYKYELTEEEALNLGRRAILAAM 247
Query: 128 ARDGASGGVVRTVTINSEG 146
RD SGG + + EG
Sbjct: 248 HRDAYSGGFINLYHVKEEG 266
>gi|219567016|dbj|BAH05026.1| proteasome subunit, beta type 8 [Oryzias luzonensis]
gi|224473834|gb|ACN49173.1| proteasome associated anitgen processing [Oryzias luzonensis]
Length = 275
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 235 THRDAYSGGSVNMYHMREDG 254
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + + ++ +P T+K L+ L + F L +IVGG DK G
Sbjct: 61 DAQQIVRIISVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDKT-GP 119
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + PLGG I E GSGS YG + + + MT +E +L ++A+ A+ RD
Sbjct: 120 NMYSLDPLGGRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGAELAIRALHNAMKRDS 179
Query: 132 ASGGVVRTVTINSEG 146
ASG + V I +G
Sbjct: 180 ASGDGIDVVVITKDG 194
>gi|15237451|ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|30693626|ref|NP_851108.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|82581524|sp|Q7DLS1.2|PSB7B_ARATH RecName: Full=Proteasome subunit beta type-7-B; AltName: Full=20S
proteasome beta subunit B-2; AltName: Full=Proteasome
component FC; AltName: Full=Proteasome subunit beta
type-2; Flags: Precursor
gi|3421104|gb|AAC32067.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|332007184|gb|AED94567.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|332007185|gb|AED94568.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
Length = 274
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|315518891|dbj|BAJ51778.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 238
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|242047976|ref|XP_002461734.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
gi|241925111|gb|EER98255.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
Length = 273
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ + + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGGVD-CTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ +KEG+T+EE QLV A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSDAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|340383914|ref|XP_003390461.1| PREDICTED: proteasome subunit beta type-5-like [Amphimedon
queenslandica]
Length = 197
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ AN+V SY L G ++ GWDK +G IY V G
Sbjct: 39 CRIYELRNKERISVAAASKLLANMV---SYYKGYGLSMGTMICGWDK-KGPGIYYVDTDG 94
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
GSGS+Y YG D +K M+ EEA +L +A+ A RD SGGVV
Sbjct: 95 NRFTNNIFSVGSGSTYAYGVIDSTYKWSMSIEEARELGKRAIYHATYRDSYSGGVVNLYH 154
Query: 142 INSEGVSRKFYPGDTLPLWHEELEPQN 168
+ +G + K D L ++ E +N
Sbjct: 155 VQEDGWT-KVSQTDVKTLHYQYEEEKN 180
>gi|334188098|ref|NP_001190443.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|332007186|gb|AED94569.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
Length = 268
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 82 AADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 141 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 200
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 201 GSGSNVDICVIT 212
>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
Length = 271
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 109 AADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 167
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V G +E GSGS+Y Y D A+ + ++A +L A+ A RD
Sbjct: 168 GFNMFYVDDSGKKVEGNLFSCGSGSTYAYSILDSAYDYNLNLDQAVELARNAIYHATFRD 227
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQ 167
G SGG VR I+ G + D L + P+
Sbjct: 228 GGSGGKVRVFHIHKNGYDKIIEGEDVFDLHYHYTNPE 264
>gi|70991743|ref|XP_750720.1| proteasome component Pre2 [Aspergillus fumigatus Af293]
gi|66848353|gb|EAL88682.1| proteasome component Pre2, putative [Aspergillus fumigatus Af293]
Length = 296
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGCRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 285
>gi|219567056|dbj|BAH05046.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
gi|219567060|dbj|BAH05048.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 235 THRDAYSGGSVNMYHMREDG 254
>gi|70923607|ref|XP_734786.1| 20S proteasome beta subunit [Plasmodium chabaudi chabaudi]
gi|56507845|emb|CAH78065.1| 20S proteasome beta subunit, putative [Plasmodium chabaudi
chabaudi]
Length = 205
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 43 AADCFYWEKYLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 101
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + G +E GSGS+Y Y D A+ ++ EEA +L A+ A RD
Sbjct: 102 GFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDTAYDYNLSVEEAVELGRNAIYHATFRD 161
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
G SGG VR I+ +G S+ D L + P
Sbjct: 162 GGSGGKVRVFYIHKDGYSKIIEGEDVYDLHYHYTNP 197
>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
gi|62900679|sp|Q5W416.1|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 276
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + + ++ G+ +V A+ L+ + Y + L G ++ GWDK +
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDK-K 179
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V GT + GSGS+Y YG D ++ ++ EEA +L +A++ A RD
Sbjct: 180 GPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRD 239
Query: 131 GASGGVVRTVTINSEG 146
SGG++ + +G
Sbjct: 240 SYSGGIINMYHMKEDG 255
>gi|348541149|ref|XP_003458049.1| PREDICTED: proteasome subunit beta type-8-like [Oreochromis
niloticus]
Length = 275
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GWD
Sbjct: 120 AADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGWD 176
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K EG +Y V GT + G G+SY YG D ++E MT EEA +L + ++ A
Sbjct: 177 K-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHAT 235
Query: 128 ARDGASGGVVRTVTINSEG 146
RD SGGVV + +G
Sbjct: 236 HRDAYSGGVVNMYHMQEDG 254
>gi|296785033|ref|NP_001171881.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|18157533|dbj|BAB83848.1| PSMB8-A [Oryzias latipes]
gi|295901497|dbj|BAJ07261.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901536|dbj|BAJ07285.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|295901538|dbj|BAJ07286.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 275
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 235 THRDAYSGGSVNMYHMREDG 254
>gi|428169158|gb|EKX38095.1| 20S proteasome subunit beta type 5 [Guillardia theta CCMP2712]
Length = 290
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD ++ + ++ + T A+ L+ + Y+ K + L G ++ GWDK
Sbjct: 125 AADCMFWERHLGRLCRLYELRNKERITTAAASKLLHNIMYSYKGYGLSMGTMIAGWDKDI 184
Query: 71 GGKIYGVPLGGTIIE-QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y GT ++ Q F++G SGS Y YG D+ +K M+ ++A +L +A+ A R
Sbjct: 185 GPNLYYCDSEGTRVKGQKFSVG-SGSPYAYGVLDEGYKFDMSIDDACELGRRAIYHATFR 243
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 163
D SGG V ++ G ++ D + L HE+
Sbjct: 244 DAMSGGRVSVYHVHENGWTK--ISMDDVQLLHEK 275
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQ--TGMIVGGWDKY 69
AD+Q + D +R + ++ + + + AN++ +L + K F +IVGG++
Sbjct: 60 ADAQKIVDLMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFND- 118
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+ +Y + G+IIE+ + GSGS YG + ++EGM+ ++A ++ V+AV A+ R
Sbjct: 119 DDPALYNLDPSGSIIEEDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALER 178
Query: 130 DGASGGVVRTVTINSE 145
D +G V VTI E
Sbjct: 179 DTGTGEGVTVVTITRE 194
>gi|225192999|dbj|BAH29629.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193011|dbj|BAH29637.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R F ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 118 SAADCQYWERLLAKECRLFRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 174
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 175 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 233
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 234 THRDAYSGGSV 244
>gi|219567058|dbj|BAH05047.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 235 THRDAYSGGSVNMYHMREDG 254
>gi|449443766|ref|XP_004139648.1| PREDICTED: proteasome subunit beta type-7-B-like [Cucumis sativus]
gi|449475427|ref|XP_004154453.1| PREDICTED: proteasome subunit beta type-7-B-like [Cucumis sativus]
Length = 273
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ + + ++ +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFGYQGYVSAALVLGGVD-VTG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESKYKEGLTRDEGIRLVTEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDVCVIT 218
>gi|290992073|ref|XP_002678659.1| predicted protein [Naegleria gruberi]
gi|284092272|gb|EFC45915.1| predicted protein [Naegleria gruberi]
Length = 271
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + L H G+ + V + + + + + + + +++GG D G
Sbjct: 83 AADTENSTALISSKLQLHRYATGKQSRVDTSMTMFKRMLWKYQGHVSAALVLGGVD-VNG 141
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G+ + PF GSGS F+ +K+ M++EEA+ +V KA+S I D
Sbjct: 142 PSLYTIYPHGSTDKLPFVTMGSGSLAAMSVFEAEYKDDMSEEEAKAIVHKAISAGIYNDL 201
Query: 132 ASGGVVRTVTINSEGVS 148
SG V IN EGV+
Sbjct: 202 GSGSNVDLCVINKEGVA 218
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD Q ++ + + + I + V+ AA L+ L+ Y+NK F L T + GG+D +
Sbjct: 55 ADMQAIARALENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYD--DE 112
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+I+ + G++IE+ ++ G+G+ D+ ++E M+ EEA+ L +++V +A RD
Sbjct: 113 PRIFVLDPVGSVIEEKYSAVGTGAPLAMALLDKEYREDMSLEEAQNLAIESVKVASGRDS 172
Query: 132 ASGGVVRTVTI 142
SG + + I
Sbjct: 173 LSGDGIDVLVI 183
>gi|297815008|ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
lyrata]
gi|297321225|gb|EFH51646.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|2511576|emb|CAA73620.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 218
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 32 AADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITG 90
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 91 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 150
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 151 GSGSNVDICVIT 162
>gi|225193059|dbj|BAH29669.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R F ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 118 SAADCQYWERLLAKECRLFRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 174
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 175 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 233
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 234 THRDAYSGGSV 244
>gi|219567064|dbj|BAH05050.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 232 THRDAYSGGSVNMYHMREDG 251
>gi|340380909|ref|XP_003388964.1| PREDICTED: proteasome subunit beta type-5-like [Amphimedon
queenslandica]
Length = 280
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 32 QLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIG 91
++ A K+ AN+V SY L G ++ GWDK +G IY V G
Sbjct: 140 RISVAAASKLLANMV---SYYKGYGLSMGTMICGWDK-KGPGIYYVDTDGNRFTNNIFSV 195
Query: 92 GSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKF 151
GSGS+Y YG D +K M+ EEA +L +A+ A RD SGGVV + +G + K
Sbjct: 196 GSGSTYAYGVIDSTYKWSMSIEEARELGKRAIYHATYRDSYSGGVVNLYHVQEDGWT-KV 254
Query: 152 YPGDTLPLWHEELEPQN 168
D L ++ E +N
Sbjct: 255 SQTDVKSLHYQYEEEKN 271
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + YV + ++ G+ A L+ + + N+ F T +I+GG+D G
Sbjct: 61 DAQALVRYVSAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYGP 120
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + P+GG E F GSGS YG + + + MT ++ L +KA+ A+ RD
Sbjct: 121 RLFSLDPIGGLNEESSFTATGSGSPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDA 180
Query: 132 ASGGVVRTVTINSEGVS 148
SG + +N EGV+
Sbjct: 181 FSGNGISLAYVNKEGVT 197
>gi|217074222|gb|ACJ85471.1| unknown [Medicago truncatula]
Length = 271
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE ++++E +LVV+++ I D
Sbjct: 146 PHLHAIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|357463621|ref|XP_003602092.1| Proteasome subunit beta type [Medicago truncatula]
gi|355491140|gb|AES72343.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 103 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 162
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 163 PGLYYVDSEGGRLKGNRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + G K GD + H P
Sbjct: 222 GASGGVASVYYVGPTG--WKKLSGDDVGELHYHYNP 255
>gi|410928728|ref|XP_003977752.1| PREDICTED: proteasome subunit beta type-5-like [Takifugu rubripes]
Length = 271
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + Y K L G +V GWDK G Y G + FA+G SGS
Sbjct: 143 SVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVG-SGSM 201
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
Y YG D + +T EEA +L +A+ A RD SGG V ++SEG +R D
Sbjct: 202 YAYGVMDSGLRHDLTVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTR--VSQDD 259
Query: 157 LPLWHEELEPQ 167
+ + H+ + Q
Sbjct: 260 VLMLHQRYKEQ 270
>gi|315518863|dbj|BAJ51761.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 272
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 232 THRDAYSGGSVNMYHMREDG 251
>gi|219567014|dbj|BAH05025.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 272
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 232 THRDAYSGGSVNMYHMREDG 251
>gi|71021599|ref|XP_761030.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
gi|46100884|gb|EAK86117.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
Length = 451
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y+ K L G ++ GWDK
Sbjct: 76 AADCQYWETYLGIQCRLHELRNKERISVAAASKYLSNLVYSYKGMGLSMGTMICGWDKTG 135
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
Y G + F++G SGS++ YG DQ +K ++ EEA++L +++ A RD
Sbjct: 136 PALFYVDSDGNRLKGDVFSVG-SGSTFAYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRD 194
Query: 131 GASGGVVRTVTINSEG--------VSRKFY--PGDTLP 158
SG V + G VS+ Y PGD +P
Sbjct: 195 AYSGNTVNLYHVRENGWEFIANYDVSKLHYEGPGDNVP 232
>gi|327289964|ref|XP_003229694.1| PREDICTED: proteasome subunit beta type-8-like [Anolis
carolinensis]
Length = 230
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q ++ R + ++ ++ A K+ AN+ L Y L G +V GWD
Sbjct: 75 AADCQYWERLLAKQCRLYYLRNKERISVSAASKLLANM--LCEYRGMG-LSVGSMVCGWD 131
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K +G +Y + G + P GSG++Y YG D + +T EEA L KA+S A
Sbjct: 132 K-KGPGLYYIDDNGVRLSGPLFSTGSGNTYAYGVLDSGHRPDLTVEEAYDLGRKAISYAT 190
Query: 128 ARDGASGGVVRTVTINSEGVSR 149
RD SGGVV + +G R
Sbjct: 191 HRDAYSGGVVNMYHMKEDGWIR 212
>gi|388510952|gb|AFK43542.1| unknown [Lotus japonicus]
Length = 272
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE +T++E ++VV+A+ + D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|169769717|ref|XP_001819328.1| proteasome component PRE2 [Aspergillus oryzae RIB40]
gi|238487964|ref|XP_002375220.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
gi|83767187|dbj|BAE57326.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700099|gb|EED56438.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
Length = 296
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K + L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 285
>gi|315518881|dbj|BAJ51773.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
Length = 272
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 232 THRDAYSGGSVNMYHMREDG 251
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q + D +RY + + Q + VK AA L + +N + F +I+ G+ K EG
Sbjct: 69 ADAQNLVDTMRYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEG 128
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+I+ + L G++ + F GSGS YG+ + +++GM+ +A ++ ++A++ AI R+
Sbjct: 129 SQIHNIDLFGSMTTEKFISTGSGSPVAYGYLESEYRDGMSVNDAYKVAMQAIAAAIRRNA 188
Query: 132 ASGGVVRTVTINSEG 146
+G + V I+ G
Sbjct: 189 GTGDSINVVIIDKNG 203
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 49 LSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFF 102
LS N L+TG I+GG D +G IY + G E+ + + GSGS Y G
Sbjct: 128 LSTLTGNLLRTGAFFIVQPILGGVDD-DGAHIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 103 DQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
+Q + + +T EEAE + KA+ A+ RD ASG + + +GV Y
Sbjct: 187 EQEYHDDVTIEEAETIAAKAIQSAVERDLASGNGINVAVVTDDGVDITRY 236
>gi|388492526|gb|AFK34329.1| unknown [Medicago truncatula]
Length = 271
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 103 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 162
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 163 PGLYYVDSEGGRLKGNRFSVG-SGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + G K GD + H P
Sbjct: 222 GASGGVASVYYVGPTG--WKKLSGDDVGELHYHYNP 255
>gi|392588491|gb|EIW77823.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 281
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + + H + G+PA V A +++ + + + +++GG D G
Sbjct: 84 AADTEFTTASISSNMELHGLSTGRPARVVTAMTMLKQYLFRYQGQVGAALVLGGID-VTG 142
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + G+ + P+ GSGS F+ WK MT+EEA LV A+S I D
Sbjct: 143 PQLFTIHPHGSTDKLPYVTMGSGSLAAMAVFESGWKNDMTREEALSLVTAAISAGIFNDL 202
Query: 132 ASGGVVRTVTINSEGV 147
SG V I +G
Sbjct: 203 GSGSNVDACVITPQGT 218
>gi|315518872|dbj|BAJ51767.1| proteasome subunit, beta type 8 [Oryzias matanensis]
Length = 272
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 232 THRDAYSGGSVNMYHMREDG 251
>gi|115398830|ref|XP_001215004.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
gi|114191887|gb|EAU33587.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
Length = 296
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K + L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEG-VSRKFYPGDTLPL-WHEELE 165
RD SGG + + EG V F D P+ W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGF--NDMNPIFWKTKLE 285
>gi|336369943|gb|EGN98284.1| hypothetical protein SERLA73DRAFT_183200 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382704|gb|EGO23854.1| hypothetical protein SERLADRAFT_470232 [Serpula lacrymans var.
lacrymans S7.9]
Length = 319
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y+ K L G ++ GWDK
Sbjct: 131 AADCQYWEMYLGMHCRLHELRNRERISVAAASKYLSNLVYSYKGTGLSMGTMICGWDK-T 189
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V GT ++ GSGS++ YG DQ +K G+T EEA++L +++ A RD
Sbjct: 190 GPALYYVDADGTRLKGDLFSVGSGSTFAYGVLDQGYKWGLTDEEAQELGRRSIYAAGHRD 249
Query: 131 GASGGVVRTVTINSEG 146
+G + EG
Sbjct: 250 AFTGNSCNLYHVKEEG 265
>gi|8671510|dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 277
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + ++ A+ L+ + Y+ + L G ++ GWD+
Sbjct: 109 AADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKG 168
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y G ++ F++G SGS Y YG D+ ++ M EEA +L +A+ A RD
Sbjct: 169 PGLYYVDSEGARLMGSRFSVG-SGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRD 227
Query: 131 GASGGVVRTVTINSEGVSR-----------KFYPGDTLPLWHE 162
GASGG V + G ++ K+YP + P+ E
Sbjct: 228 GASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQE 270
>gi|225719232|gb|ACO15462.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
gi|225719406|gb|ACO15549.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
Length = 270
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D +D Y L H +V A+ L+ +Y K L G ++ G+DK G
Sbjct: 117 DRVLATDCRLYELRNHC-----RISVAAASKLLANNAYRYKGMGLSMGAMIAGYDKRGPG 171
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
Y G F++G SGS Y YG D ++ +T EEA +L +A++ A RD A
Sbjct: 172 LYYVDSEGSRTPGNLFSVG-SGSVYAYGVLDADYRYDLTDEEAYELGRRAIAHATYRDAA 230
Query: 133 SGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQ 167
SGG+VR + + EG +K + H + PQ
Sbjct: 231 SGGIVRVMHVTKEG--KKMISEEDCKELHYKYLPQ 263
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 61 MIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLV 119
+++GG DK G KIY + PLGG I E+ F GSGS YG + +K GM+ EE +L
Sbjct: 108 VLIGGLDK-AGPKIYSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELA 166
Query: 120 VKAVSLAIARDGASGGVVRTVTINSE 145
+A+ A+ RD ASG ++ I +E
Sbjct: 167 ARALESAMKRDSASGNGMQFCVITAE 192
>gi|388857139|emb|CCF49354.1| probable PRE2-20S core proteasome subunit (beta5) [Ustilago hordei]
Length = 325
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y+ K L G ++ GWDK
Sbjct: 119 AADCQYWETYLGIQCRLHELRNKERISVAAASKYLSNLVYSYKGMGLSMGTMICGWDK-T 177
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS++ YG DQ +K ++ EEA++L +++ A RD
Sbjct: 178 GPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRD 237
Query: 131 GASGGVVRTVTINSEG--------VSRKFY--PGDTLP 158
SG V + G VS+ Y PGD +P
Sbjct: 238 AYSGNTVNLYHVRENGWEFIANYDVSKLHYDGPGDNVP 275
>gi|308470996|ref|XP_003097730.1| CRE-PBS-5 protein [Caenorhabditis remanei]
gi|308239848|gb|EFO83800.1| CRE-PBS-5 protein [Caenorhabditis remanei]
Length = 284
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q TV+ Y + + + A K AN+ L Y + L G +V G+D
Sbjct: 120 AADCQFWTRTVAKYCTLYELREKTSITVSAASKYFANV--LYGYRGQG-LSVGSMVAGYD 176
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K +G +I+ V G + GSGS YG D +K MT EEA L ++A+ A
Sbjct: 177 K-KGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDEEARNLGLRAIMHAT 235
Query: 128 ARDGASGGVVRTVTIN-SEGVSRKFYPGDTLPLWHE 162
RD SGGV I +E + + P D LW+E
Sbjct: 236 YRDSGSGGVCNLCHITPTEKI--RLPPMDVSKLWYE 269
>gi|219567028|dbj|BAH05032.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQT----VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 82 SAADCQHWERLLAKECRLYKLRNNQRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|115466486|ref|NP_001056842.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|55297435|dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594882|dbj|BAF18756.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|215737492|dbj|BAG96622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737619|dbj|BAG96749.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + ++ A+ L+ + Y+ + L G ++ GWD+
Sbjct: 109 AADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKG 168
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y G ++ F++G SGS Y YG D+ ++ M EEA +L +A+ A RD
Sbjct: 169 PGLYYVDSEGARLMGSRFSVG-SGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRD 227
Query: 131 GASGGVVRTVTINSEGVSR-----------KFYPGDTLPLWHE 162
GASGG V + G ++ K+YP + P+ E
Sbjct: 228 GASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQE 270
>gi|3980264|emb|CAA09603.1| 20S proteasome beta subunit [Cicer arietinum]
Length = 238
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 70 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 129
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +A+ A RD
Sbjct: 130 PGLYYVDSEGGRLKGTRFSVG-SGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRD 188
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + G + GD + H P
Sbjct: 189 GASGGVASVYYVGPTGWKK--LSGDDVGELHYHYNP 222
>gi|222634976|gb|EEE65108.1| hypothetical protein OsJ_20167 [Oryza sativa Japonica Group]
Length = 277
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + ++ A+ L+ + Y+ + L G ++ GWD+
Sbjct: 109 AADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKG 168
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y G ++ F++G SGS Y YG D+ ++ M EEA +L +A+ A RD
Sbjct: 169 PGLYYVDSEGARLMGSRFSVG-SGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRD 227
Query: 131 GASGGVVRTVTINSEGVSR-----------KFYPGDTLPLWHE 162
GASGG V + G ++ K+YP + P+ E
Sbjct: 228 GASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQE 270
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 55 NFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKE 108
NFL++G I+GG D+ EG +Y + G + E+ + + GSGS Y G +Q ++E
Sbjct: 132 NFLRSGAFFVVQPILGGVDE-EGPHVYSMDALGGMSEENYTVTGSGSQYALGVLEQHYEE 190
Query: 109 GMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
++ EEA+ + KA+ A+ RD ASG + + EGV
Sbjct: 191 DLSIEEAKTVAAKAIQSAVERDLASGNGINVAVVTDEGV 229
>gi|328872141|gb|EGG20508.1| proteasome subunit beta type 5 [Dictyostelium fasciculatum]
Length = 300
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 37 ATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIE-QPFAIGGSG 94
A K+ AN+V Y+ K + L G ++ GWDK G +Y V GT ++ Q F++G SG
Sbjct: 166 AASKILANIV----YSYKGYGLSMGTMITGWDK-TGPCLYYVDNDGTRLKGQRFSVG-SG 219
Query: 95 SSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
S+Y YG D +K +T +EA++L +AV A RD SGG + + G
Sbjct: 220 STYAYGVLDSGYKPDLTDQEAQELGRRAVYHATHRDAMSGGFINVYHVKETG 271
>gi|307178286|gb|EFN67058.1| Proteasome subunit beta type-7 [Camponotus floridanus]
Length = 277
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ ++ + L H + G+ V A L++ + + + + +I+GG+D +G
Sbjct: 88 AADTEMTTEMIASQLELHRLNTGRIVPVCTANTLIKQMLFRYQGHIGAALILGGFD-LDG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + G+ + + GSGS F+ W+ + +EEA+QLV A+ + D
Sbjct: 147 PQLYCIYPHGSTEKLKYTTMGSGSLAAMAVFESRWRPDLPEEEAKQLVADAIRAGVFNDL 206
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDT 156
ASG V I GV P DT
Sbjct: 207 ASGSNVDLCVIRKTGVDY-LRPYDT 230
>gi|449017225|dbj|BAM80627.1| 20S core proteasome subunit beta 2 [Cyanidioschyzon merolae strain
10D]
Length = 279
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSY--NNKNFLQTGMIVGGWDKY 69
AAD++ + + + H Q V VAA + RL Y + ++ +++GG D+
Sbjct: 94 AADTEATTQLIASQMELHR-QAVDRDLVPVAAAMTRLKHYLFRYQGYISAALVLGGVDEL 152
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y V G++ + P+ GSGS F+ W E +T+EEA+ LV +A+S I
Sbjct: 153 NGPSLYTVYPHGSVDQLPYVSMGSGSLAAMAVFEARWHEALTEEEAKCLVYEAISAGIEN 212
Query: 130 DGASGGVVRTVTINSEGVSRKFYPG 154
D SG V + + G + + G
Sbjct: 213 DLGSGSNVDLCVVKNGGRAVDYLRG 237
>gi|167521858|ref|XP_001745267.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776225|gb|EDQ89845.1| predicted protein [Monosiga brevicollis MX1]
Length = 247
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + ++ G+ +V A+ ++ + +N +N L G +V GWDK
Sbjct: 88 AADCSYWERYLAMQCRLYELRNGERISVAAASKVLANIVWNYRNMGLSMGTMVCGWDKKG 147
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y G + F++G SGS+Y YG D +K ++ EEA+ L +A+ A RD
Sbjct: 148 PGLFYVDSDGTRLTNNMFSVG-SGSTYAYGVLDAGYKWDLSDEEAQDLGRRAIYHATFRD 206
Query: 131 GASGGVVRTVTINSEG 146
SGG V + G
Sbjct: 207 AYSGGTVNLYHMRQTG 222
>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDANG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYH 247
Query: 142 I 142
I
Sbjct: 248 I 248
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ---TGMIVGGWDKYE 70
D+Q + + + + I+ GQ +V AA + L +Y N+N ++VGG D
Sbjct: 62 DAQQLVRIINVECNLYEIRRGQKISVGAAATI--LSNYLNQNRFSPYYVQLLVGGVDT-S 118
Query: 71 GGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y V GG +E+ F GSGS YG + +K MT+EEA +L V+A+ A+ R
Sbjct: 119 GPSVYSVDAAGGATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRAAMLR 178
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTL 157
D ASG V I E ++ P D +
Sbjct: 179 DSASGEGYNVVIITQEKF--EYLPEDKI 204
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 29 HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQP 87
+ ++ G+ + A L+ ++ Y+ K F + T +VGG+D E ++ + G+++E+
Sbjct: 75 YELEHGREIKTRSLAKLLSIILYSYKLFPMLTEAVVGGFD--EAPSLFVLDAVGSLLEER 132
Query: 88 FAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
+ GSGS +Q+++E M EEA+ L VKAV AI RD SG V + I EG+
Sbjct: 133 YTALGSGSQLALSIIEQSYREDMPLEEAKNLAVKAVLAAIERDVLSGDGVDVLVITREGI 192
>gi|195151901|ref|XP_002016877.1| GL22004 [Drosophila persimilis]
gi|194111934|gb|EDW33977.1| GL22004 [Drosophila persimilis]
Length = 298
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 73
D V+ R + H +Q+ V A V+ L Y+ + ++ +I+GG D EG
Sbjct: 94 DLHHVARLTRAQMDLHRLQMSCKVPVVCANQFVKHLLYDYQGNIRINLIIGGVDN-EGPS 152
Query: 74 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 133
+Y GT + PFA GSG ++ W+E + ++ AE L + AV I D S
Sbjct: 153 LYSTHFDGTTEKVPFASNGSGDFAAMTVLEKRWRESLDEKGAESLAIDAVRSGIKNDLYS 212
Query: 134 GGVVRTVTINSE---GVSRKFYPGDTL---PLWHEELEPQNSLLDMMNVASP 179
+ I ++ + K + G + P+W + +P L + P
Sbjct: 213 CSPIHICVIRTDYSVSLYDKIFAGSPVPRSPVWRVKPQPPKVLFAADHALEP 264
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGG 72
D+Q + ++ + +Q G+P T+K +L+ +LS ++VGG DK G
Sbjct: 58 DAQALVRMIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKM-GP 116
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
KI+ + LGG I E GSGS YG + +K G++ ++ L V+AV A+ RD
Sbjct: 117 KIFSLDALGGQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDS 176
Query: 132 ASGGVVRTVTINSE 145
ASG + V I +
Sbjct: 177 ASGNGIALVRITKD 190
>gi|392595619|gb|EIW84942.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 314
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y K L G ++ GWDK
Sbjct: 131 AADCQYWETYLGMHCRLHELRNRERISVSAASKYLSNLVYGYKGMGLSMGTMICGWDK-T 189
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS++ YG DQ ++ M+ EEA++L +++ A RD
Sbjct: 190 GPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDMSDEEAQELGRRSIYAAGHRD 249
Query: 131 GASGGVVRTVTINSEG 146
SG V + EG
Sbjct: 250 AFSGNTVNLYHVKEEG 265
>gi|357504315|ref|XP_003622446.1| Proteasome subunit beta type [Medicago truncatula]
gi|124359794|gb|ABN06120.1| Peptidase T1A, proteasome beta-subunit [Medicago truncatula]
gi|355497461|gb|AES78664.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE ++++E +LVV+++ I D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|391863500|gb|EIT72808.1| 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
[Aspergillus oryzae 3.042]
Length = 245
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K + L G ++ G
Sbjct: 80 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGMT 136
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 137 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAM 196
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 197 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 234
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD Q ++ + + + + G+PA V AA L+ + Y +K T ++VGG D+ G
Sbjct: 59 ADMQALARILSAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGVDE-TG 117
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G++IE +A GSG++ G + +++ M+ +EA++L KAV +AI RD
Sbjct: 118 SHLYVMDPVGSVIEDDYAALGSGAAIAIGILEANYRKDMSIDEAKELAEKAVRIAIERDA 177
Query: 132 ASG 134
SG
Sbjct: 178 ISG 180
>gi|15231544|ref|NP_189265.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
gi|75273433|sp|Q9LIP2.1|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S
proteasome beta subunit E-2; AltName: Full=Proteasome
epsilon-2 chain; Flags: Precursor
gi|16612308|gb|AAL27514.1|AF439846_1 AT3g26340/F20C19_6 [Arabidopsis thaliana]
gi|9294292|dbj|BAB02194.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|21553804|gb|AAM62897.1| 26S proteasome beta subunit, putative [Arabidopsis thaliana]
gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6 [Arabidopsis thaliana]
gi|332643626|gb|AEE77147.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
Length = 273
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 106 AADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +++ A RD
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVG-SGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRD 224
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + +G ++ GD + H P
Sbjct: 225 GASGGVASVYHVGPQGWTK--LSGDDVGELHYHYYP 258
>gi|215701183|dbj|BAG92607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + ++ A+ L+ + Y+ + L G ++ GWD+
Sbjct: 56 AADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKG 115
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y G ++ F++G SGS Y YG D+ ++ M EEA +L +A+ A RD
Sbjct: 116 PGLYYVDSEGARLMGSRFSVG-SGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRD 174
Query: 131 GASGGVVRTVTINSEGVSR-----------KFYPGDTLPLWHE 162
GASGG V + G ++ K+YP + P+ E
Sbjct: 175 GASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQE 217
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q++ + + ++ G T L+ + + N+++ L T +I+GG+D G
Sbjct: 65 DAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGA 124
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + P+GG E F GSGS YG + +K + E+ + VKA+S A+ RD
Sbjct: 125 KLFSLDPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALSSAMQRDA 184
Query: 132 ASGGVVRTVTINSEGVSRKFYP 153
SG + IN +GV K Y
Sbjct: 185 YSGNGISLAHINKDGV--KLYS 204
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + Y+R + + +Q ++ AA L+ + +K + ++VGG+DK
Sbjct: 58 DAQVLVRYMRAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFDKKP-- 115
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
I+ + G +E +A GSGS ++YG + ++ M ++A L +KA+S+A RD A
Sbjct: 116 HIFSIDAAGGSVEDEYASTGSGSPFVYGVLEAEYQPNMKLDDAINLAIKAISVAKQRDSA 175
Query: 133 SGGVVRTVTINSE 145
SG +++ I+ E
Sbjct: 176 SGNMLQIGVIDPE 188
>gi|346471555|gb|AEO35622.1| hypothetical protein [Amblyomma maculatum]
Length = 278
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + YN K L G+++ GWDK G +Y V G + GSGS+
Sbjct: 148 SVAAASKLLANILYNYKGMGLSLGVMICGWDK-RGPGLYYVDNEGNRLSGNLYSCGSGST 206
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y YG D + ++ EEA +L KA+ A RD ASGG+VR + G
Sbjct: 207 YAYGVLDNGYSYDLSDEEAFELGRKAIFHATFRDSASGGIVRVYRVKETG 256
>gi|198453342|ref|XP_002137652.1| GA27343 [Drosophila pseudoobscura pseudoobscura]
gi|198132319|gb|EDY68210.1| GA27343 [Drosophila pseudoobscura pseudoobscura]
Length = 251
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
+D V+ R + H +Q+ V A V+ L Y+ + ++ +I+GG D EG
Sbjct: 99 SDLHQVARLTRAQMDLHRLQMRCKVPVVCANQFVKHLLYDYQGNIRINLIIGGVDN-EGP 157
Query: 73 KIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGA 132
+Y GT + PFA GSG ++ W+E + ++ AE L + AV I D
Sbjct: 158 SLYSTRFDGTTEKVPFASNGSGDFAAMTVLEKLWRESLDEKGAESLAIDAVRSGIKNDLY 217
Query: 133 SGGVVRTVTINSE---GVSRKFYPGDTLPLWHEE 163
SG + I ++ + K + G +P E
Sbjct: 218 SGSPIHICVIRTDYSVSLYDKIFAGSPVPRPTRE 251
>gi|357504055|ref|XP_003622316.1| Proteasome subunit beta type [Medicago truncatula]
gi|355497331|gb|AES78534.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE ++++E +LVV+++ I D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|308321636|gb|ADO27969.1| proteasome subunit beta type-5 [Ictalurus furcatus]
Length = 266
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + Y K L G +V GWDK G Y G + FA+G SGS
Sbjct: 137 SVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDMFAVG-SGSM 195
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
Y YG D + +T EEA L +A+ A RD SGG V ++SEG R D
Sbjct: 196 YAYGVLDSGHRTDLTIEEACDLGRRAIYQATFRDAYSGGQVNLYRVHSEGWER-VSQDDV 254
Query: 157 LPLWHE 162
L L H+
Sbjct: 255 LALHHQ 260
>gi|388583698|gb|EIM23999.1| proteasome subunit beta type-7 [Wallemia sebi CBS 633.66]
Length = 272
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+ + L H++ + V A +++ + + + + +++GG D G
Sbjct: 80 AADTEAVTALISSNLELHSLSTNRKPRVVTAMTMLKQMLFQYQGHIGAALVLGGIDST-G 138
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ + P+ GSGS F+ WK MT+ EA+ LV+KA+S I D
Sbjct: 139 PNLFTVAPHGSTDKLPYVTMGSGSLAAMAVFEAEWKPQMTESEAKDLVIKAISAGIFNDL 198
Query: 132 ASGGVVRTVTINSE 145
SG I+ +
Sbjct: 199 GSGSNCDVCVIDQD 212
>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax Sal-1]
gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 273
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 111 AADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 169
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + G +E GSGS+Y Y D A+ ++ E+A +L A+ A RD
Sbjct: 170 GFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRD 229
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
G SGG VR I+ G + D L + P
Sbjct: 230 GGSGGKVRVFYIHKNGYDKIIEGQDVYELHYHYTNP 265
>gi|67526949|ref|XP_661536.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|40740051|gb|EAA59241.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|259481493|tpe|CBF75064.1| TPA: proteasome component Pre2, putative (AFU_orthologue;
AFUA_6G08310) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K + L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYGLSMGTMLAGVT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 285
>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
H]
Length = 270
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 108 AADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 166
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + G +E GSGS+Y Y D A+ ++ E+A +L A+ A RD
Sbjct: 167 GFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRD 226
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
G SGG VR I+ G + D L + P
Sbjct: 227 GGSGGKVRVFYIHKNGYDKIIEGEDVYDLHYHYTNP 262
>gi|432883660|ref|XP_004074316.1| PREDICTED: proteasome subunit beta type-8-like [Oryzias latipes]
Length = 195
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 46 SAADCQYWERLLAKEYRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 102
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 103 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRDIAHA 161
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 162 THRDAYSGGSVNMYHMREDG 181
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q + + + ++ G+ A L+ + ++++ F T +I+GG+D EG
Sbjct: 57 DAQAIVRLLTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGA 116
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + PLGG E+ F GSGS YG + + M+ EE +L + A+ A+ RD
Sbjct: 117 KLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDT 176
Query: 132 ASGGVVRTVTINSEGV 147
SG + I EGV
Sbjct: 177 FSGNGISLAVITKEGV 192
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK---NFLQTGMIVGGWDKY 69
AD Q ++ + ++ +++ +++ AA L+ + ++N+ F++ ++VGG D
Sbjct: 59 ADMQVLTKIAKAYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVE--VLVGGIDD- 115
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
EG ++ + G++IE +A G+G+ + +K GM+ +EA L +KA++ +I+R
Sbjct: 116 EGPHLFIMDALGSLIEDDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAIKAINQSISR 175
Query: 130 DGASGGVVRTVTINSEGVSRKFYP 153
D SG + +TI G + + P
Sbjct: 176 DPVSGDGIDILTITGNGSTEETIP 199
>gi|224110734|ref|XP_002315619.1| predicted protein [Populus trichocarpa]
gi|222864659|gb|EEF01790.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 40 KVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
K+ AN+ L SY L G ++ GWD+ G Y GG + F++G SGS Y Y
Sbjct: 139 KLLANI--LFSYRGMG-LSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVG-SGSPYAY 194
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G D ++ M+ EEA +L +A+ A RDGASGGV + + G ++ GD +
Sbjct: 195 GILDSGYRFDMSIEEAAELGRRAIYHATFRDGASGGVASVYYVGANGWTK--LSGDDVSE 252
Query: 160 WHEELEPQNSLLDMMNVASPEPMNM 184
H + P +++ + EP M
Sbjct: 253 LHYKYYP------VVSAETSEPDQM 271
>gi|225192958|dbj|BAH29695.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNVYH 247
Query: 142 I 142
I
Sbjct: 248 I 248
>gi|55162805|emb|CAH63453.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 252
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ G+ +V A+ L+ + Y + L G ++ GWDK +G +Y V GT +
Sbjct: 116 LRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDK-KGPGLYYVDQNGTRLSGNMF 174
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
GSGS+Y YG D ++ ++ EEA +L +A++ A RD SGG++ + +G
Sbjct: 175 STGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDG 231
>gi|195162811|ref|XP_002022247.1| GL24711 [Drosophila persimilis]
gi|194104208|gb|EDW26251.1| GL24711 [Drosophila persimilis]
Length = 272
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H + + V A +++ + + + + +++GG DK G
Sbjct: 88 AADTERTTDIISSQLELHRLSTERDVRVVAANTMLKQMLFRYQGHISAALVLGGVDK-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK M+++EA+ LV A++ I D
Sbjct: 147 PHIYCIHPHGSSDKLPYATMGSGSLAAMSVFESRWKPDMSEKEAKLLVRDAIAAGIFNDL 206
Query: 132 ASGGVVRTVTINSEGV 147
SG V I + V
Sbjct: 207 GSGSNVDLCVIRKDSV 222
>gi|195626826|gb|ACG35243.1| proteasome subunit beta type 7-A precursor [Zea mays]
Length = 273
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ + + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGGVD-CTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ G+ PFA GSGS F+ +KEG+T+EE QLV +A+ I D
Sbjct: 146 PHLHTAYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|256085670|ref|XP_002579037.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
gi|360043676|emb|CCD81222.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
Length = 518
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGW 66
AAD Q ++ + R F ++ ++ A K+ AN+V YN K L G + GW
Sbjct: 111 AADCQFWERVLAKHCRLFELRNKERISVAAASKLLANIV----YNYKGMGLSIGTTIVGW 166
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK G IY V G GSGS Y YG D +K M+ E+A +L +++ A
Sbjct: 167 DK-NGSGIYYVDTDGNRTPGNLFSVGSGSPYAYGVLDTGYKYEMSDEDAYELARRSIFHA 225
Query: 127 IARDGASGGVV 137
RD ASGG V
Sbjct: 226 THRDAASGGFV 236
>gi|159124282|gb|EDP49400.1| proteasome component Pre2, putative [Aspergillus fumigatus A1163]
Length = 296
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 285
>gi|82752963|ref|XP_727486.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii 17XNL]
gi|23483352|gb|EAA19051.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii]
Length = 287
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 108 AADCFYWEKYLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 166
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + G +E GSGS+Y Y D A+ ++ E+A +L A+ A RD
Sbjct: 167 GFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRD 226
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
G SGG VR I+ G S+ D L + P
Sbjct: 227 GGSGGKVRVFYIHKNGYSKIIEGEDVYDLHYHYTNP 262
>gi|91983309|gb|ABE68720.1| 20S proteasome beta subunit [Arachis hypogaea]
Length = 223
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 55 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 114
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D ++ ++ +EA +L +A+ A RD
Sbjct: 115 PGLYYVDSEGGRLKGTRFSVG-SGSPYAYGILDSGYRYDLSVDEAVELGRRAIYHATFRD 173
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGVV + EG K + GD + H + P
Sbjct: 174 GASGGVVSVYHVGPEGW--KKWTGDDVGDLHYQYYP 207
>gi|354610751|ref|ZP_09028707.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353195571|gb|EHB61073.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 239
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ + +L A +A N++R LQ ++GG D+ +GG ++ + GG
Sbjct: 109 ARLYENRRSEELTMTALSTLAGNVLR------SAPLQVTPLLGGVDE-DGGHVFSLDGGG 161
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
++ +A GGSG YG +Q + + ++ +E + +A+ A RD ASG + T
Sbjct: 162 GVLSDTYAAGGSGMQIAYGVLEQQYDDALSAKEGRAVAAQAIDSASERDTASGNGLTVAT 221
Query: 142 INSEGVSRKFYPG 154
I SEGV+ + G
Sbjct: 222 ITSEGVAFDEFDG 234
>gi|145520279|ref|XP_001445995.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413472|emb|CAK78598.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q Y+ + ++ G +V A+ ++ L+ Y N L G ++ G D
Sbjct: 67 AADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYRNSG-LSMGCMIAGTDT- 124
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y + G ++ GSGS+Y YG D ++ ++ EA +L V+A+ A R
Sbjct: 125 TGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHR 184
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLL 171
D ASGGVVR I+ +G + K + G + H + Q L+
Sbjct: 185 DTASGGVVRVYHIHKDGWT-KVHDGIDVVDLHYKFAQQKGLV 225
>gi|297818166|ref|XP_002876966.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
lyrata]
gi|297322804|gb|EFH53225.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 107 AADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETG 166
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D +K M+ EEA +L +++ A RD
Sbjct: 167 PGLYYVDNEGGRLKGDRFSVG-SGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRD 225
Query: 131 GASGGVVRTVTINSEG 146
GASGGV + +G
Sbjct: 226 GASGGVASVYHVGPQG 241
>gi|225193065|dbj|BAH29673.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 232 THRDAYSGGSV 242
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
D+Q++ V+ + +Q G+ TVK V L +LS +I+GG D+Y G
Sbjct: 58 DAQSLVRMVQVEARLYKMQRGEGLTVKAVTTMLANILSSRRYYPFMVQLIMGGVDRY-GP 116
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+IY + LGG I E+ GSGS YG + +K G++ E+ L +A+ A+ RD
Sbjct: 117 RIYSLDALGGQIEERRIVATGSGSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDS 176
Query: 132 ASGGVVRTVTINSE 145
ASG + V I +
Sbjct: 177 ASGDKIELVRITDK 190
>gi|225193002|dbj|BAH29631.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193017|dbj|BAH29641.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D ++KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSSYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 232 THRDAYSGGSV 242
>gi|219567024|dbj|BAH05030.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 275
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q ++ R + +++ ++ A K+ N+ +L Y L G ++ GWD
Sbjct: 120 AADCQYWERLLAKECRLYRLRNSQRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWD 176
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 177 K-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHAT 235
Query: 128 ARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 236 HRDAYSGGSVNMYHMREDG 254
>gi|2511578|emb|CAA73621.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 273
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +++ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|388515987|gb|AFK46055.1| unknown [Lotus japonicus]
Length = 270
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 40 KVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLY 99
K+ AN+ L SY L G ++ GWD+ G Y GG + F++G SGS Y Y
Sbjct: 136 KMLANI--LYSYRGMG-LSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVG-SGSPYAY 191
Query: 100 GFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPL 159
G D +K M+ EEA +L +A+ A RDGASGGV + G K GD +
Sbjct: 192 GVLDSGYKYDMSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNG--WKKLSGDDVGE 249
Query: 160 WHEELEP 166
H P
Sbjct: 250 LHYHYNP 256
>gi|334185660|ref|NP_001189989.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
gi|332643799|gb|AEE77320.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
Length = 267
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 82 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 140
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +++ I D
Sbjct: 141 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDL 200
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 201 GSGSNVDICVIT 212
>gi|219567066|dbj|BAH05051.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + +++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNSQRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|224078968|ref|XP_002305699.1| predicted protein [Populus trichocarpa]
gi|118486666|gb|ABK95170.1| unknown [Populus trichocarpa]
gi|222848663|gb|EEE86210.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 89 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVD-CTG 147
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG++++E ++V +A+ I D
Sbjct: 148 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLSRDEGIKIVSEAICSGIFNDL 207
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 208 GSGSNVDVCVIT 219
>gi|18405364|ref|NP_566818.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
gi|82581523|sp|O23710.2|PSB7A_ARATH RecName: Full=Proteasome subunit beta type-7-A; AltName: Full=20S
proteasome beta subunit B-1; AltName: Full=Proteasome
component FA; AltName: Full=Proteasome component FB;
AltName: Full=Proteasome subunit beta type-2; Flags:
Precursor
gi|3421102|gb|AAC32066.1| 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
gi|7939516|dbj|BAA95719.1| 20S proteasome beta subunit; multicatalytic endopeptidase
[Arabidopsis thaliana]
gi|21554360|gb|AAM63467.1| 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
gi|28058828|gb|AAO29958.1| 20S proteasome beta subunit (PBB1) [Arabidopsis thaliana]
gi|30023762|gb|AAP13414.1| At3g27430 [Arabidopsis thaliana]
gi|332643798|gb|AEE77319.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
Length = 273
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +++ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|84998292|ref|XP_953867.1| proteasome subunit beta 7 [Theileria annulata]
gi|65304864|emb|CAI73189.1| proteasome subunit beta 7, putative [Theileria annulata]
Length = 271
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD + + ++ + H + + V++ +++ + + + Q +I+GG+D Y G
Sbjct: 89 AADLEHTTLWLANNIELHRLNTKKAPRVQMCISMLVHELFKYQGYKQCALILGGFD-YTG 147
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PF GSGS +Q + +GM+ EEA +L VKA+S I D
Sbjct: 148 PHLFSVSPHGSSDSLPFCTMGSGSLNAMTVLEQNYFDGMSVEEATELAVKAISAGITNDL 207
Query: 132 ASGGVVRTVTINSEGV--SRKF 151
SGG V V ++ G SR F
Sbjct: 208 GSGGNVDVVVMDKNGSKHSRTF 229
>gi|284165546|ref|YP_003403825.1| proteasome endopeptidase complex subunit beta [Haloterrigena
turkmenica DSM 5511]
gi|302595714|sp|D2RUI0.1|PSB2_HALTV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|284015201|gb|ADB61152.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
turkmenica DSM 5511]
Length = 237
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 5 CLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVG 64
L L+ +Q+ +R ++ + + G+P ++ A L + F I+G
Sbjct: 85 ALTLVGSVGGAQSFIRTLRAEVNLYESRRGEPMPIEALATLAGNFARGGP-FRAINPILG 143
Query: 65 GWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVS 124
G D+ EG +Y + G ++ + + GSG YG +Q ++EG++ EEA+ + +A+
Sbjct: 144 GVDE-EGSHVYSIDPAGGVMADDYTVTGSGMQLAYGLLEQEYEEGLSLEEAQSVAARAIE 202
Query: 125 LAIARDGASGGVVRTVTINSEGV 147
A+ RD SG V + EGV
Sbjct: 203 SAVERDTGSGNGVFLAAVTGEGV 225
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 49 LSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFF 102
LS N L++G I+GG D EG IY + G E+ + + GSGS Y G
Sbjct: 128 LSTLTGNLLRSGAFYIVQPILGGVDD-EGAHIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 103 DQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
+Q + +G+T +EA+ + KA+ A+ RD ASG + + +GV Y
Sbjct: 187 EQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGINVAVVTDDGVDITRY 236
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 49 LSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFF 102
LS N L++G I+GG D EG IY + G E+ + + GSGS Y G
Sbjct: 128 LSTLTGNLLRSGAFYIVQPILGGVDD-EGAHIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 103 DQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
+Q + +G+T +EA+ + KA+ A+ RD ASG + + +GV Y
Sbjct: 187 EQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGINVAVVTDDGVDITRY 236
>gi|255637923|gb|ACU19278.1| unknown [Glycine max]
Length = 271
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE + ++E +LVV+A+ I D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLGRDEGIKLVVEAICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|219567038|dbj|BAH05037.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 232
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 76 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNM--MLGYKGMG-LSMGSMICGW 132
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG ++ V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 133 DK-EGPGLFYVDSNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 191
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 192 THRDAYSGGSVNMYHMREDG 211
>gi|240278169|gb|EER41676.1| proteasome component PRE2 [Ajellomyces capsulatus H143]
gi|325096234|gb|EGC49544.1| proteasome component [Ajellomyces capsulatus H88]
Length = 283
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T EEA +L +++ A RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + + EG + + DT P+ W +LE
Sbjct: 237 AYSGGYINLYHVKEEGWKKHGF-SDTNPIFWKTKLE 271
>gi|225192978|dbj|BAH29683.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193050|dbj|BAH29663.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDHNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 232 THRDAYSGGSV 242
>gi|156086830|ref|XP_001610822.1| proteasome epsilon subunit [Babesia bovis T2Bo]
gi|154798075|gb|EDO07254.1| proteasome epsilon subunit , putative [Babesia bovis]
Length = 268
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD +V H ++ + TV A+ ++ + + + + L G ++ GWDK +
Sbjct: 105 AADCTYWERHVAKLCRLHELRNQERITVAHASQILANIFFYFRGYGLSAGTMIAGWDKNK 164
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +++ V G + GSGS + YG DQ ++ MT +EA +L +A+ A RD
Sbjct: 165 GPELFYVSDKGERVSGKLFSVGSGSLFAYGVIDQHYRSDMTLDEAVELGKRAIYQAAHRD 224
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMM 174
SGG V ++ G ++ D L + E +N D M
Sbjct: 225 AYSGGYVNLYHVHENGWTKIVDYQDINELHYSYCEQKNIPGDSM 268
>gi|66800081|ref|XP_628966.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
gi|74896741|sp|Q54BC8.1|PSB5_DICDI RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|60462347|gb|EAL60569.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
Length = 272
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 37 ATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGS 95
A K+ AN+V Y+ K + L G ++ GWDK G ++Y V GT + GSGS
Sbjct: 140 AASKILANIV----YSYKGYGLSMGTMITGWDK-TGPQLYYVDNDGTRLHGQRFSCGSGS 194
Query: 96 SYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGD 155
+Y YG D +K M EEA +L +AV A RD SGG + + +G +K D
Sbjct: 195 TYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINVYHVQKDGW-KKISSDD 253
Query: 156 TLPLWHE 162
L+ +
Sbjct: 254 CFKLYQK 260
>gi|154274908|ref|XP_001538305.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
gi|150414745|gb|EDN10107.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
Length = 283
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T EEA +L +++ A RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + + EG + + DT P+ W +LE
Sbjct: 237 AYSGGYINLYHVKEEGWKKHGF-SDTNPIFWKTKLE 271
>gi|341876502|gb|EGT32437.1| CBN-PBS-5 protein [Caenorhabditis brenneri]
Length = 284
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q V+ Y + + + A K AN+ L Y + L G +V G+D
Sbjct: 120 AADCQFWTRIVAKYCTLYELREKTSITVSAASKYFANV--LYGYRGQG-LSVGSMVAGYD 176
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K +G +I+ V G + GSGS YG D +K MT EEA QL ++A+ A
Sbjct: 177 K-KGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDEEARQLGLRAIMHAT 235
Query: 128 ARDGASGGVVRTVTIN-SEGVSRKFYPGDTLPLWHEELE 165
RD SGGV I +E + + P D LW E E
Sbjct: 236 YRDSGSGGVCNLCHITPTEKI--RLPPMDVSKLWFEFAE 272
>gi|225557527|gb|EEH05813.1| proteasome component PRE2 [Ajellomyces capsulatus G186AR]
Length = 283
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T EEA +L +++ A RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + + EG + + DT P+ W +LE
Sbjct: 237 AYSGGYINLYHVKEEGWKKHGF-SDTNPIFWKTKLE 271
>gi|297838367|ref|XP_002887065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332906|gb|EFH63324.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H + G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYETGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIDPNGLTETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|115462469|ref|NP_001054834.1| Os05g0187000 [Oryza sativa Japonica Group]
gi|8671504|dbj|BAA96835.1| beta 2 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|46275847|gb|AAS86397.1| 20S proteasome beta subunit [Oryza sativa Japonica Group]
gi|113578385|dbj|BAF16748.1| Os05g0187000 [Oryza sativa Japonica Group]
gi|125551108|gb|EAY96817.1| hypothetical protein OsI_18743 [Oryza sativa Indica Group]
gi|215736977|dbj|BAG95906.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630450|gb|EEE62582.1| hypothetical protein OsJ_17385 [Oryza sativa Japonica Group]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V + L++ ++ + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATGRESRVVTSLTLLKSHLFSYQGHVSAALVLGGVD-VTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G+ PFA GSGS F+ +KEG+T+EE QLV +A+ I D
Sbjct: 146 PHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVAEAIRGGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
Length = 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ Y+ + L G ++ GWD+
Sbjct: 109 AADCQFWQRNLGTRCRLHELGNKRRISVTGASKLLANTLYSYRGMGLSMGTMIAGWDETG 168
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + + F++G SGS+Y YG D ++ MT EEA +L +++ A RD
Sbjct: 169 PGLYYVDSEGGRVKGRRFSVG-SGSTYAYGVLDTGFRWDMTVEEAVELARRSIYHATFRD 227
Query: 131 GASGGVVRTVTINSEGVSR-----------KFYPGDTLPLWHEELEPQNS 169
GASGGV + +G + K+YP P E + + S
Sbjct: 228 GASGGVASVYYVGPDGWKKMSGDDVGELHYKYYPVSDAPAEQEVVMKEAS 277
>gi|225193041|dbj|BAH29657.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD Q ++ ++ + +++ + TVK A L+ ++ ++ + ++VGG D+
Sbjct: 58 ADMQALAKILKLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEEGP 117
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
I PLG ++IE +A G+G+ D +++ MT EEA++L V+AV AI RD
Sbjct: 118 HLIVMDPLG-SLIEDNYAALGTGAKLAVSLLDASYRPDMTVEEAKKLAVQAVKAAIERDP 176
Query: 132 ASGGVVRTVTINSEG 146
SGG + V ++ G
Sbjct: 177 VSGGGIDLVVVDGGG 191
>gi|297788966|ref|XP_002862504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308064|gb|EFH38762.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H + G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYETGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G PFA GSGS F+ +KEG+T++E +LV +A+ I D
Sbjct: 147 PHLHTIDPNGLTETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|225192946|dbj|BAH29701.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 232 THRDAYSGGSV 242
>gi|227204261|dbj|BAH56982.1| AT3G27430 [Arabidopsis thaliana]
Length = 254
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +++ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGSNVDICVIT 218
>gi|225193068|dbj|BAH29675.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|225193023|dbj|BAH29645.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193032|dbj|BAH29651.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193074|dbj|BAH29679.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|225193038|dbj|BAH29655.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|225193014|dbj|BAH29639.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|225192993|dbj|BAH29625.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|225192955|dbj|BAH29697.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|119469453|ref|XP_001257946.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
gi|119406098|gb|EAW16049.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
Length = 296
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
RD SGG + + EG + W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGFDDMNPIFWKTKLE 285
>gi|225710552|gb|ACO11122.1| Proteasome subunit beta type-5 precursor [Caligus rogercresseyi]
Length = 278
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ +Y K L G ++ G+DK G ++Y V G+ GSGS
Sbjct: 145 SVAAASKLLANNAYRYKGMGLSMGAMIAGYDK-RGPELYYVDSEGSRTPGNLFSVGSGSV 203
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
Y YG D ++ +T EEA +L +A++ A RD ASGG++R + + EG +K +
Sbjct: 204 YAYGVLDADYRYDLTDEEAYELGRRAIAHATYRDAASGGIIRVMHVTKEG--KKMISEED 261
Query: 157 LPLWHEELEPQ 167
H + PQ
Sbjct: 262 CKELHYKYLPQ 272
>gi|168046797|ref|XP_001775859.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672866|gb|EDQ59398.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A +++ + + + +++GG D G
Sbjct: 89 AADTENVTDMVSSQLALHRYATGRDSRVVTALTMIKTHLFRYQGHVSAALVLGGVD-VTG 147
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE +T+EE ++V A+ I D
Sbjct: 148 PHLHAIYPHGSTDTLPFATMGSGSLAAMSVFESRYKENLTREEGMEIVSAAICAGIFNDL 207
Query: 132 ASGGVVRTVTINSEG 146
SG V I EG
Sbjct: 208 GSGSNVDLCIITKEG 222
>gi|225703218|gb|ACO07455.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 162
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
AD+Q V+ ++ + H+IQ+ P VK A+++R L YNNK LQ G I GWD+ +G
Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKATASVLRELCYNNKEELQAGFITAGWDRKKGP 126
Query: 73 KIYGV 77
++Y V
Sbjct: 127 QVYTV 131
>gi|317032170|ref|XP_001394180.2| proteasome component PRE2 [Aspergillus niger CBS 513.88]
gi|350631028|gb|EHA19399.1| hypothetical protein ASPNIDRAFT_52883 [Aspergillus niger ATCC 1015]
Length = 296
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 12 AADSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWD 67
AAD Q ++RY Q H I+ + TV A+ ++ L+Y K L G ++ G
Sbjct: 131 AADCQY---WLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMGLSMGTMLAGMT 187
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A+
Sbjct: 188 PQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEALELGRRSILAAM 247
Query: 128 ARDGASGGVVRTVTINSEG-VSRKFYPGDTLPL-WHEELE 165
RD SGG + + EG V F D P+ W +LE
Sbjct: 248 HRDAYSGGFINLYHVKEEGWVHHGF--NDMNPIFWKTKLE 285
>gi|225192969|dbj|BAH29689.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192972|dbj|BAH29687.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192975|dbj|BAH29685.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192996|dbj|BAH29627.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193026|dbj|BAH29647.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193035|dbj|BAH29653.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193044|dbj|BAH29659.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193047|dbj|BAH29661.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193062|dbj|BAH29671.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|125978307|ref|XP_001353186.1| GA17382 [Drosophila pseudoobscura pseudoobscura]
gi|54641939|gb|EAL30688.1| GA17382 [Drosophila pseudoobscura pseudoobscura]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H + + V A +++ + + + + +++GG DK G
Sbjct: 88 AADTERTTDIISSQLELHRLSTERDVRVVAANTMLKQMLFRYQGHISAALVLGGVDK-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK M++ EA+ LV A++ I D
Sbjct: 147 PHIYCIHPHGSSDKLPYATMGSGSLAAMSVFESRWKPDMSENEAKLLVRDAIAAGIFNDL 206
Query: 132 ASGGVVRTVTINSEGV 147
SG V I + V
Sbjct: 207 GSGSNVDLCVIRKDSV 222
>gi|225192949|dbj|BAH29699.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|389583316|dbj|GAB66051.1| 20S proteasome beta subunit, partial [Plasmodium cynomolgi strain
B]
Length = 268
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 108 AADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 166
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + G +E GSGS+Y Y D A+ + E+A +L A+ A RD
Sbjct: 167 GFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLNLEQAVELARNAIYHATFRD 226
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
G SGG VR I+ G + D L + P
Sbjct: 227 GGSGGKVRVFYIHKNGYDKIIEGQDVYELHYHYTNP 262
>gi|145484105|ref|XP_001428075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395158|emb|CAK60677.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q Y+ + ++ G +V A+ ++ L+ Y N L G ++ G D
Sbjct: 106 AADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYRNSG-LSMGCMIAGTDT- 163
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y + G ++ GSGS+Y YG D ++ ++ EA +L ++A+ A R
Sbjct: 164 TGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGIRAIYHATHR 223
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLL 171
D ASGGVVR I+ +G + K + G + H + Q L+
Sbjct: 224 DTASGGVVRVYHIHKDGWT-KVHDGIDVVDLHYQFAQQKGLV 264
>gi|225192987|dbj|BAH29621.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193008|dbj|BAH29635.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 251
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GWD
Sbjct: 119 AADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWD 175
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 K-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHAT 234
Query: 128 ARDGASGGVV 137
RD SGG V
Sbjct: 235 HRDAYSGGSV 244
>gi|225192961|dbj|BAH29693.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192990|dbj|BAH29623.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193005|dbj|BAH29633.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193020|dbj|BAH29643.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193071|dbj|BAH29677.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYH 247
Query: 142 I 142
I
Sbjct: 248 I 248
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 49 LSYNNKNFLQTGM------IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFF 102
LS N L++G I+GG D EG IY + G E+ + + GSGS Y G
Sbjct: 128 LSTLTGNLLRSGAFYIVQPILGGVDD-EGAHIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 103 DQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFY 152
+Q + + +T +EA ++ KA+ A+ RD ASG + + EGV Y
Sbjct: 187 EQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGINVAVVTDEGVDITRY 236
>gi|315518885|dbj|BAJ51775.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|315518889|dbj|BAJ51777.1| proteasome subunit, beta type 8 [Oryzias dancena]
Length = 238
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG ++ V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLFYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 5/146 (3%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q++ Y+ + ++ G+ + L+ + ++++ F MIVGG+D+ +G
Sbjct: 56 DAQSLVRYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDE-KGF 114
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K+Y + PLGG E+ F GSGS YG + +K+ M ++ LV+KA+ A+ RD
Sbjct: 115 KLYSLDPLGGVNEEKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAMERDT 174
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTL 157
SG V I +GV K Y D +
Sbjct: 175 FSGNGVSLALITKDGV--KIYEDDEI 198
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AD Q + +Y++ H + I +P TVK +A L +LS N +++GG+D
Sbjct: 71 ADLQFIYNYMKNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQILMGGYDTQP- 129
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+++ + G + E+ + GSGS G + + +T ++A L +AV AI RD
Sbjct: 130 -RLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYSPDLTGDQAMDLAARAVMSAIKRDS 188
Query: 132 ASGGVVRTVTINSEG-VSRKFYP 153
+G V I EG V R+ YP
Sbjct: 189 FTGTGVIVTKITKEGHVEREIYP 211
>gi|449300001|gb|EMC96014.1| hypothetical protein BAUCODRAFT_70978 [Baudoinia compniacensis UAMH
10762]
Length = 285
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L Y+ K L G + G E
Sbjct: 119 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTPME 178
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V GT + GSG ++ YG D +K M ++EA +L +++ A RD
Sbjct: 179 GPALYYVDNDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDMEEDEALELGRRSILAATHRD 238
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG V I EG R + DT PL W +LE
Sbjct: 239 AYSGGFVNLYHIKEEGWVRHGF-NDTNPLFWKYKLE 273
>gi|225192934|dbj|BAH29709.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192940|dbj|BAH29705.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 22 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 81
R + ++ ++ A K+ N+ +L Y L G ++ GWDK EG IY V G
Sbjct: 132 CRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGWDK-EGPGIYYVDDNG 187
Query: 82 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 141
+ GSGS+Y YG D +KE MT EEA +L + + A RD SGGVV
Sbjct: 188 NRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMYH 247
Query: 142 I 142
I
Sbjct: 248 I 248
>gi|407408250|gb|EKF31765.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 255
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V++ V L H + G+ + V A +++ Y + ++ +++GG D EG
Sbjct: 78 AADTEAVTNMVSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGYVSAALVLGGVD-VEG 136
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+ V G+ PF GSGS + +KE MT EEA++LV A+ I D
Sbjct: 137 PFLATVAPHGSTDRLPFVSMGSGSIAAMSALETGYKENMTLEEAKELVASAIRKGIFNDP 196
Query: 132 ASGGVVRTVTINSEGVS----------RKF------YPGDTLPLWHEELEPQNSLLDM 173
SG V I RK+ +P T P+ EE+ ++ D+
Sbjct: 197 YSGTQVDLCVITRTKTDLLIGYDKPNERKYPKQEIRFPPGTTPVLREEIRQLVTITDV 254
>gi|219567012|dbj|BAH05024.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 275
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V G + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGNRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 234
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 235 THRDAYSGGSVNMYHMREDG 254
>gi|225192943|dbj|BAH29703.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDNNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 232 THRDAYSGGSV 242
>gi|225192964|dbj|BAH29691.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 249
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 116 SAADCQYWERLLAKECRLYKLRNNHRISVAAASKLLCNM--MLGYRGMG-LSMGSMICGW 172
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 173 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 231
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 232 THRDAYSGGSV 242
>gi|170043975|ref|XP_001849640.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
gi|167867238|gb|EDS30621.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
Length = 282
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ ++ + L H + G+ V VA +++ + + + +++GG D G
Sbjct: 90 AADTEMTTNMIASNLELHRLNTGRTVPVVVANTMLKQFLFRYQGHISAALVLGGVDN-TG 148
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK M +EE ++LV A++ + D
Sbjct: 149 SYIYCIYPHGSTDKLPYATMGSGSLAAMSVFESRWKPDMDEEEGKKLVRDAIAAGVFNDL 208
Query: 132 ASGGVVRTVTINSEG 146
SG + I +G
Sbjct: 209 GSGSNIDLCVIRKDG 223
>gi|30688785|ref|NP_850641.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
gi|332643797|gb|AEE77318.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
Length = 267
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D G
Sbjct: 88 AADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD-ITG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KEG+T++E +LV +++ I D
Sbjct: 147 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDL 206
Query: 132 ASGGVVRTVTI 142
SG V I
Sbjct: 207 GSGSNVDICVI 217
>gi|219567052|dbj|BAH05044.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|91085931|ref|XP_970194.1| PREDICTED: similar to proteasome subunit beta type 5,8 [Tribolium
castaneum]
Length = 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + YN K L GM++ GWDK G ++Y V GT GSGS
Sbjct: 144 SVAAASKLMANMVYNYKGMGLSMGMMLAGWDK-RGPQLYYVDSEGTRTPGKVFSVGSGSI 202
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y +G D +K +T EEA L +++ A RD SGG+VR + G
Sbjct: 203 YAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRVYHMKPTG 252
>gi|16588840|gb|AAL26914.1|AF323592_1 putative 20S proteasome beta subunit 5, partial [Prunus persica]
Length = 201
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+
Sbjct: 33 AADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETG 92
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G Y GG + F++G SGS Y YG D ++ M+ EEA +L +A+ A RD
Sbjct: 93 PGLYYVDSEGGRLKGMRFSVG-SGSPYAYGVLDDGYRYDMSVEEAAELARRAIYHATFRD 151
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
GASGGV + G K GD + H P
Sbjct: 152 GASGGVASVYHVGPNGW--KKLSGDDVGELHYHYYP 185
>gi|219567044|dbj|BAH05040.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYKGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD+Q ++D +R + + + + +VK AA + + ++ + + ++VGG+D
Sbjct: 63 ADAQVLADVLRMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGFDT--A 120
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + GT+ E+ F + GSGS G + + M EE L V+AV A RD
Sbjct: 121 PRLYSLDWFGTVAEEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRDT 180
Query: 132 ASGGVVRTVTINSEGVSRKFYP-GDTLPL 159
ASG + I+ G++ + Y GD + L
Sbjct: 181 ASGEGIDVAVIDRNGITMRHYRLGDVIRL 209
>gi|409045696|gb|EKM55176.1| hypothetical protein PHACADRAFT_255622 [Phanerochaete carnosa
HHB-10118-sp]
Length = 300
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y+ K L G ++ GWDK
Sbjct: 126 AADCQYWETYLGIQCRLHELRNRERISVAAASKYLSNLVYSYKGMGLSMGTMICGWDK-T 184
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V GT ++ GSGS++ YG DQ ++ +T EEA++L +++ A RD
Sbjct: 185 GPAVYYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDEEAQELGRRSIYAAGHRD 244
Query: 131 GASGGVVRTVTINSEG 146
SG + + +G
Sbjct: 245 AFSGNTINLYHVQEDG 260
>gi|357620434|gb|EHJ72628.1| proteasome subunit beta 5 [Danaus plexippus]
Length = 281
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 16 QTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKI 74
+ ++ R + ++ ++ A K+ AN+V YN K L GM++ G DK G ++
Sbjct: 130 RVLAKQCRLYELRNRERISVAAASKLMANMV----YNYKGMGLSMGMMLAGIDK-RGAQL 184
Query: 75 YGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG 134
Y V GT GSGS Y +G D ++ + EEA++L +A+ A RD SG
Sbjct: 185 YYVDSEGTRTPGKVFSVGSGSVYAFGVLDSGYRWDLEDEEAQELGRRAIYHATHRDAYSG 244
Query: 135 GVVRTVTINSEG 146
G++R IN +G
Sbjct: 245 GIIRVYHINDKG 256
>gi|219567050|dbj|BAH05043.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|219567048|dbj|BAH05042.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|219567046|dbj|BAH05041.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|219567026|dbj|BAH05031.1| proteasome subunit, beta type 8 [Oryzias minutillus]
Length = 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNQRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 198 THRDAYSGGSVNMYHMREDG 217
>gi|156363343|ref|XP_001626004.1| predicted protein [Nematostella vectensis]
gi|156212864|gb|EDO33904.1| predicted protein [Nematostella vectensis]
Length = 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 32 QLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIG 91
++ A K+ AN+V Y L G ++ GWDK +G +Y V GT +
Sbjct: 147 RISVAAASKILANMVY---YYKGMGLSMGTMICGWDK-KGPGLYYVDSDGTRLSNQMFSV 202
Query: 92 GSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
GSGS+Y YG D +K M+ EEA L V+++ A RD SGGVV + G
Sbjct: 203 GSGSTYAYGVMDSGYKYDMSPEEAYDLGVRSIYHATHRDAYSGGVVNLYHMKETG 257
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q++ + + ++ G A L+ + + N++F T +I+GG+D G
Sbjct: 64 DAQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGP 123
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + P+GG E F GSGS G + +K+ MT + ++L VKA+ A+ RD
Sbjct: 124 KLFSLDPVGGLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGKELAVKALISAMERDA 183
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELE 165
SG + I+ GV K Y + + E++
Sbjct: 184 YSGNGISLAVIDENGV--KIYSDEEIEKMVEKIR 215
>gi|432888938|ref|XP_004075097.1| PREDICTED: proteasome subunit beta type-7-like isoform 2 [Oryzias
latipes]
Length = 286
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + L H + G+ V A +++ + + + ++ +++GG D G
Sbjct: 92 AADTEMTTQIISSNLELHALSTGRQPRVATANRMLKQMLFRYQGYIGAALVLGGVD-CNG 150
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G+ + P+ GSGS F+ +K GM +EEA+QLV A++ I D
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKTGMEEEEAKQLVRDAIAAGIFNDL 210
Query: 132 ASGGVVRTVTINSEGVS--RKFYPGDTLPLWHEELE 165
SG + I V R + + H ELE
Sbjct: 211 GSGSNIDLCVITKGNVDYIRPHDEANKKGVRHGELE 246
>gi|156543654|ref|XP_001607442.1| PREDICTED: proteasome subunit beta type-7 [Nasonia vitripennis]
Length = 277
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ ++ + L H + G+ V A+ L++ L + ++ + +IVGG D G
Sbjct: 88 AADTEMTTEMISSQLELHRLNTGRIVPVVTASKLLKQLLFRHQGHIGAALIVGGVDN-SG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G+ + GSGS F+ WK GM++EE ++LV A+ + D
Sbjct: 147 PHLYCIYPHGSCDTLQYTTMGSGSLAAMSVFESRWKPGMSEEEGKELVADAIRAGVFNDL 206
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 207 GSGNSVDVCVIR 218
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKN-----FLQTGMIVGGWDK 68
D+Q + ++ + ++ G+ +V A+ L L +Y N+N ++Q +++GG+D
Sbjct: 62 DAQQLVRILQVECNLFEMRRGKTMSVGAASTL--LSNYLNQNRYYPYYVQ--LLMGGFDD 117
Query: 69 YEGGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
EG +Y V +GG E+ GSGS + YG + ++ GM +++A+ L V+AV A+
Sbjct: 118 -EGPSVYSVDAMGGATKEEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSAM 176
Query: 128 ARDGASGGVVRTVTINSE 145
RD ASG + V I +
Sbjct: 177 RRDSASGEDIMVVVITKD 194
>gi|296803825|ref|XP_002842765.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
gi|238846115|gb|EEQ35777.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
Length = 283
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 116 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPEE 175
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T+EEA L +++ A RD
Sbjct: 176 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALALGSRSILAATHRD 235
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + + EG + + DT P+ W+ +LE
Sbjct: 236 AYSGGFINLYHVKEEGWVKHGF-SDTNPIFWNTKLE 270
>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 29 HTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQP 87
+ ++ G+ TV A+ L+ ++S L G ++ GWD+ G ++Y V GT ++
Sbjct: 140 YELRNGRRITVAAASKLLANVMSAYRGYGLSMGTMITGWDE-TGPQLYYVDNDGTRLKGK 198
Query: 88 FAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
+ GSGS Y YG D W+E ++ EEA L +A+ A RD ASGG+ + ++G
Sbjct: 199 YFSVGSGSMYAYGVLDNHWREDLSVEEAIDLGKRAIYHATHRDAASGGINNLYHVTADGW 258
Query: 148 SRKFYPGDTLPLWHEEL--EPQNSL 170
K+ G + H E E +N++
Sbjct: 259 --KYIHGIDVNDMHYEFAEEKKNAM 281
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 13 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEG 71
AD QT++ V + + + V A L+ + Y + F ++VGG D+ EG
Sbjct: 55 ADMQTLARIVEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDE-EG 113
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y + G IIE + GSG+ + +K+ M+ +EA L +K+V A+ RD
Sbjct: 114 SHLYSLDPIGAIIEDDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDA 173
Query: 132 ASGGVVRTVTINSEGVSRKFYP 153
ASG V + I G K YP
Sbjct: 174 ASGDGVDVLVIGKSGTLEKTYP 195
>gi|158518464|ref|NP_001103512.1| proteasome beta 8 subunit [Xenopus (Silurana) tropicalis]
gi|157423123|gb|AAI53714.1| psmb8 protein [Xenopus (Silurana) tropicalis]
Length = 271
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GWD
Sbjct: 115 AADCQYWERVLAKECRLYQLRNNSRISVSAASKLMCNM--MLQYRGTG-LSVGSMICGWD 171
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K +G +Y V GT + GSG+SY YG D ++ +T EEA L +A+S A
Sbjct: 172 K-KGPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRYDLTPEEAYDLGRRAISYAT 230
Query: 128 ARDGASGGVVRTVTINSEGVSR--KFYPGDTLPLWHEE 163
RD SGG V + +G + +F D L + EE
Sbjct: 231 HRDAYSGGFVNLYHMKEDGWVKIGQFDVNDLLHKYTEE 268
>gi|24664391|ref|NP_524076.2| proteasome beta2 subunit [Drosophila melanogaster]
gi|7294336|gb|AAF49685.1| proteasome beta2 subunit [Drosophila melanogaster]
gi|15292263|gb|AAK93400.1| LD44234p [Drosophila melanogaster]
gi|220947342|gb|ACL86214.1| Prosbeta2-PA [synthetic construct]
gi|220956886|gb|ACL90986.1| Prosbeta2-PA [synthetic construct]
Length = 272
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H +Q + V A +++ + + + + +++GG DK G
Sbjct: 88 AADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDK-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK +++EE ++LV A++ + D
Sbjct: 147 PHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDL 206
Query: 132 ASGGVVRTVTINSEGV 147
SG + I V
Sbjct: 207 GSGSNIDLCVIRKGSV 222
>gi|219567054|dbj|BAH05045.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 243
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 87 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 143
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 144 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 202
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG V + +G
Sbjct: 203 THRDAYSGGSVNMYHMREDG 222
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGG 72
D+Q++ + + ++ G T L+ + + N+++ L T +I+GG+D G
Sbjct: 65 DAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGYDLINGA 124
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
K++ + P+GG E F GSGS YG + ++ +T ++ + VKA+S A+ RD
Sbjct: 125 KLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDA 184
Query: 132 ASGGVVRTVTINSEGVS 148
SG + IN +GV+
Sbjct: 185 YSGNGISLAHINKDGVN 201
>gi|345322152|ref|XP_001505328.2| PREDICTED: proteasome subunit beta type-10-like [Ornithorhynchus
anatinus]
Length = 232
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + + H++ G+ + ++R + + + + T +IVGG D G
Sbjct: 47 AADAEMTTQMLSSNIELHSLSTGRKPRLATVTRMLRQMLFRYQGHIGTSLIVGGVD-ITG 105
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y V G+ + F GSG + +K MT EEA+QLV +AV+ I D
Sbjct: 106 PHLYSVSPYGSSQQLFFTAMGSGQDAAIAILEDRFKPNMTLEEAQQLVAEAVTAGIMNDL 165
Query: 132 ASGGVVRTVTINSEGVSRKFYP 153
SG V I EG+ R P
Sbjct: 166 GSGSNVDLCVITQEGI-RSHRP 186
>gi|195590348|ref|XP_002084908.1| GD14518 [Drosophila simulans]
gi|194196917|gb|EDX10493.1| GD14518 [Drosophila simulans]
Length = 272
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ +D + L H +Q + V A +++ + + + + +++GG DK G
Sbjct: 88 AADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDK-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK +++EE ++LV A++ + D
Sbjct: 147 PHIYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDL 206
Query: 132 ASGGVVRTVTINSEGV 147
SG + I V
Sbjct: 207 GSGSNIDLCVIRKGSV 222
>gi|295673490|ref|XP_002797291.1| proteasome component PRE2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282663|gb|EEH38229.1| proteasome component PRE2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 283
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + I G + + DT P+ W +LE
Sbjct: 237 AYSGGFINLYHIKEAGWEKHGF-SDTNPIFWKTKLE 271
>gi|225681120|gb|EEH19404.1| proteasome subunit beta type-5 [Paracoccidioides brasiliensis Pb03]
Length = 283
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + I G + + DT P+ W +LE
Sbjct: 237 AYSGGFINLYHIKEAGWEKHGF-SDTNPIFWKTKLE 271
>gi|343426308|emb|CBQ69839.1| probable PRE2-20S core proteasome subunit (beta5) [Sporisorium
reilianum SRZ2]
Length = 319
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ + L Y K L G ++ GWDK
Sbjct: 113 AADCQYWETYLGIQCRLHELRNKERISVAAASKYLSNLVYGYKGMGLSMGTMICGWDK-T 171
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS++ YG DQ +K ++ +EA++L +++ A RD
Sbjct: 172 GPALFYVDSDGTRLKGDVFSVGSGSTFAYGVLDQGYKWDLSDQEAQELGRRSIYAAAHRD 231
Query: 131 GASGGVVRTVTINSEG--------VSRKFY--PGDTLP 158
SG V + G VS+ Y PGD +P
Sbjct: 232 AYSGNTVNLYHVRENGWEFIANYDVSKLHYDGPGDDVP 269
>gi|47271420|ref|NP_571467.2| proteasome subunit beta type-8 [Danio rerio]
gi|42490966|gb|AAH66288.1| Proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
Length = 271
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q + + ++ Q +V A+ L+ +L Y L G ++ GWDK
Sbjct: 116 AADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMG-LSMGSMICGWDK- 173
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+G +Y V GT + G G+SY YG D ++E MT EEA +L + ++ A R
Sbjct: 174 QGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHR 233
Query: 130 DGASGGVVRTVTINSEG 146
D SGGVV + +G
Sbjct: 234 DAYSGGVVNLYHMQEDG 250
>gi|341875287|gb|EGT31222.1| hypothetical protein CAEBREN_17132 [Caenorhabditis brenneri]
gi|341892625|gb|EGT48560.1| hypothetical protein CAEBREN_10825 [Caenorhabditis brenneri]
Length = 277
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD V+ + L + G+ A V A + +N + ++ +++GG D G
Sbjct: 95 AADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDP-TG 153
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+Y GT + PF GSGS ++ +K MTKEEAEQLV +A+ + D
Sbjct: 154 PHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKTDMTKEEAEQLVQRALEAGMHGDN 213
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
ASG + V I + + G +P + + EP +
Sbjct: 214 ASGNSLNLVVIEP---NETVFKGPIVPSFCKRPEPND 247
>gi|226292176|gb|EEH47596.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb18]
Length = 283
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q Y+ H ++ + +V A+ ++ L YN K L G + G E
Sbjct: 117 AADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQE 176
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y + GT + GSG ++ YG D ++ +T+EEA +L +++ A RD
Sbjct: 177 GPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHRD 236
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPL-WHEELE 165
SGG + I G + + DT P+ W +LE
Sbjct: 237 AYSGGFINLYHIKEAGWEKHGF-SDTNPIFWKTKLE 271
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 14 DSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKY 69
D+Q + VR + + + ++ G+ A L+ + ++++ F T +I+GG+D
Sbjct: 52 DAQAI---VRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLL 108
Query: 70 EGGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
EG K++ + PLGG E+ F GSGS YG + + M+ EE +L + A+ A+
Sbjct: 109 EGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAME 168
Query: 129 RDGASGGVVRTVTINSEGV 147
RD SG + I +GV
Sbjct: 169 RDTFSGNGISLAVITKDGV 187
>gi|225706814|gb|ACO09253.1| Proteasome subunit beta type 5 precursor [Osmerus mordax]
Length = 221
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + Y K L G +V GWDK G Y G + FA+G SGS
Sbjct: 93 SVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVG-SGSM 151
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 156
Y YG D ++ +T E+A +L +A+ A RD SGG V ++S+G R D
Sbjct: 152 YAYGVVDSGLRQDLTVEQACELGRRAIYQATYRDAYSGGQVNLYHVHSKGWDR-VSQEDV 210
Query: 157 LPLWHEELEP 166
L L H+ P
Sbjct: 211 LMLHHQYKAP 220
>gi|149245104|ref|XP_001527086.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449480|gb|EDK43736.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
Length = 282
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q ++ H ++ + +V A+ ++ L Y+ K L G ++ G K E
Sbjct: 119 AADCQYWETWLGTQCRLHELREKERISVAAASKILSNLVYSYKGMGLSMGTMICGHTKKE 178
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G IY V GT ++ GSG ++ YG D +K +T EEA L +++ A RD
Sbjct: 179 GPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDSQYKWDLTVEEALYLGKRSILAATHRD 238
Query: 131 GASGGVVRTVTINSEG 146
SGG + +N EG
Sbjct: 239 AYSGGSINLYHVNEEG 254
>gi|2851557|sp|P34065.2|PSB5_CHICK RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain chain 1; AltName: Full=Multicatalytic
endopeptidase complex chain 1; AltName: Full=Proteasome
chain 1; AltName: Full=Proteasome subunit C1; Flags:
Precursor
gi|1906303|dbj|BAA19471.1| proteasome C1 subunit [Gallus gallus]
Length = 256
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 35 QPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGS 93
+P +V A+ L+ + Y K L G ++ GWDK G Y G I + FA+G S
Sbjct: 127 EPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGTRIPGEAFAVG-S 185
Query: 94 GSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
GSSY YG D + M +EA +L +A+ A RD SGG V + G R
Sbjct: 186 GSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHVGPRGWRR 241
>gi|219567036|dbj|BAH05036.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ +N+ +L Y L G ++ GW
Sbjct: 82 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLSNM--MLGYRGMG-LSMGSMICGW 138
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+ Y YG D +KE MT EEA +L + ++ A
Sbjct: 139 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHA 197
Query: 127 IARDGASGGVVRTVTINSEG 146
RD SGG + + +G
Sbjct: 198 THRDAYSGGSINMYHMREDG 217
>gi|2654058|gb|AAB87679.1| LMP7 [Danio rerio]
gi|29561859|emb|CAD87792.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Danio rerio]
gi|94732364|emb|CAK04955.1| proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
gi|190338169|gb|AAI62902.1| Psmb8 protein [Danio rerio]
gi|190339582|gb|AAI62883.1| Psmb8 protein [Danio rerio]
Length = 271
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q + + ++ Q +V A+ L+ +L Y L G ++ GWDK
Sbjct: 116 AADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMG-LSMGSMICGWDK- 173
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+G +Y V GT + G G+SY YG D ++E MT EEA +L + ++ A R
Sbjct: 174 QGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHR 233
Query: 130 DGASGGVVRTVTINSEG 146
D SGGVV + +G
Sbjct: 234 DAYSGGVVNLYHMQEDG 250
>gi|154345087|ref|XP_001568485.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065822|emb|CAM43599.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 254
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
+AD++ V++ V L H ++ G+ + V A L++ Y + + +++GG D EG
Sbjct: 78 SADTEAVTNMVSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGHVSAALVLGGVD-VEG 136
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+ + G+ PF GSGS + A+K+ MT EEA++LV A+ I D
Sbjct: 137 PFLATIAPHGSTDRLPFVTMGSGSIAAMAQMETAYKDNMTCEEAKELVASAIRKGIFNDP 196
Query: 132 ASGGVVRTVTINSEGV---------SRKFYPGD-------TLPLWHEELEPQNSLLDMMN 175
SG V I + + + YP T P+ EE+ L+D++
Sbjct: 197 YSGTQVDVCVITKDKTEVMIGYDKPNERMYPRQEIVLRPGTTPVLKEEI---RQLVDIVE 253
Query: 176 V 176
V
Sbjct: 254 V 254
>gi|444728808|gb|ELW69250.1| Proteasome subunit beta type-11 [Tupaia chinensis]
Length = 295
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
+AD T ++ L ++ GQ +V AA L+ + + L + GWD+
Sbjct: 94 SADCATWYRVLQRELRLRALREGQLPSVASAAKLLSAMMSRYRGLDLCVATALCGWDR-S 152
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ V GT ++ GSGS Y YG D+ ++ MT +EA L +AV+ A RD
Sbjct: 153 GPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMTTQEAYALARRAVAHATHRD 212
Query: 131 GASGGVVRTVTINSEG---VSRKFYPGDTLPLWHEELE-PQNSLLDMMNVASPEP 181
SGG V + G VSR GD L+ E + P+ + + A PEP
Sbjct: 213 AYSGGSVDLFHVRESGWEYVSR----GDACVLYAELRKLPEPEQQEEASQARPEP 263
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 14 DSQTVSDYVRYFLHQ---HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKY 69
D+Q + VR + + + ++ G+ A L+ + ++++ F T +I+GG+D
Sbjct: 57 DAQAI---VRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLL 113
Query: 70 EGGKIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 128
EG K++ + PLGG E+ F GSGS YG + + M+ EE +L + A+ A+
Sbjct: 114 EGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAME 173
Query: 129 RDGASGGVVRTVTINSEGV 147
RD SG + I +GV
Sbjct: 174 RDTFSGNGISLAVITKDGV 192
>gi|384483124|gb|EIE75304.1| proteasome subunit beta type-7 [Rhizopus delemar RA 99-880]
Length = 269
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ ++ + + H++ G+ V A L++ + Y + + +++GG+D G
Sbjct: 86 AADTEFTTNLISSQIELHSLATGRKPRVATAMTLLKQMLYKYQGHIGAALVLGGFD-VTG 144
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y V G+ P+ GSGS F+ WK M +EEA LV +A+ I D
Sbjct: 145 PQLYTVYPHGSTDNLPYVTMGSGSLAAMSVFESKWKPNMNREEAIDLVREAIEAGIFNDL 204
Query: 132 ASGGVVRTVTINSE 145
SG V I +
Sbjct: 205 GSGSNVDVCVITKD 218
>gi|448722684|ref|ZP_21705216.1| proteasome endopeptidase complex subunit beta, partial [Halococcus
hamelinensis 100A6]
gi|445788932|gb|EMA39630.1| proteasome endopeptidase complex subunit beta, partial [Halococcus
hamelinensis 100A6]
Length = 86
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 74 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 133
IY + GG+++E+P+ GSGS + YG +Q ++EG++ EEA+ + AV A+ RD AS
Sbjct: 1 IYSIGPGGSVMEEPYNATGSGSPFAYGVLEQQFEEGLSNEEAKTVATDAVKSAVERDTAS 60
Query: 134 GGVVRTVTINSEGVSRKFY 152
G + I GV + +
Sbjct: 61 GNGIIISEITDAGVDIEVH 79
>gi|194885021|ref|XP_001976373.1| GG20051 [Drosophila erecta]
gi|190659560|gb|EDV56773.1| GG20051 [Drosophila erecta]
Length = 390
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 29 HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGK-IYGVPLGGTIIEQ 86
H ++ + TV AA ++ +S K L GM++ G+D EG K IY G Q
Sbjct: 137 HQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDD-EGPKLIYVDSEGMRSHGQ 195
Query: 87 PFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
F++G SGS Y G D ++ ++ +EA L +A+ A ++D SGG+VR INSEG
Sbjct: 196 VFSVG-SGSPYALGVLDTGYRHDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHINSEG 254
>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
gi|84028246|sp|P28064.3|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i; Flags: Precursor
gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
norvegicus]
gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
[Rattus norvegicus]
Length = 276
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK- 178
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+G +Y V GT + GSG++Y YG D +++ ++ EEA L +A+ A R
Sbjct: 179 KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHR 238
Query: 130 DGASGGVVRTVTINSEG 146
D SGGVV + +G
Sbjct: 239 DSYSGGVVNMYHMKKDG 255
>gi|358253538|dbj|GAA53374.1| proteasome subunit beta type-5 [Clonorchis sinensis]
Length = 541
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 16 QTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIY 75
+ +S R F ++ ++ A K+ AN+ L Y L G + GWDK +G IY
Sbjct: 122 RVLSKQCRLFELRNKERMSVAAASKLLANM--LYEYKGAG-LSIGTTIVGWDK-KGAGIY 177
Query: 76 GVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGG 135
V G GSGS+Y YG D +K M EEA +L +A+ A RD ASGG
Sbjct: 178 YVDDDGQRFTGDLFSVGSGSTYAYGVLDTMYKYDMKNEEAYELARRAIYHATHRDAASGG 237
Query: 136 VVRTVTI 142
+ ++
Sbjct: 238 FINLASV 244
>gi|322370361|ref|ZP_08044920.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
gi|320550069|gb|EFW91724.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
Length = 240
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 32 QLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIG 91
Q+ A +A N++R F I+GG D+ EG IY + G ++ + +
Sbjct: 119 QMSMQALSTLAGNMLR-----GGPFFMVSPILGGIDE-EGSHIYSLDPAGGVMSDDYTVT 172
Query: 92 GSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
GSG YG +Q ++EG++ EEA+ + + + A+ RD SG V I EGV
Sbjct: 173 GSGMQLAYGVLEQDYEEGLSNEEAKMVAARGIKSAVERDTGSGNGVFLAEITEEGV 228
>gi|357125970|ref|XP_003564662.1| PREDICTED: proteasome subunit beta type-7-A-like [Brachypodium
distachyon]
Length = 272
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H + + V A L++ ++ + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYATSRESRVVTALTLLKTHLFSYQGHVSAALVLGGVD-CTG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ V G++ PFA GSGS F+ +KEG+T++E +LV A+ I D
Sbjct: 146 PHLHTVYPHGSVDTLPFATMGSGSLAAMSVFESKYKEGLTRDEGIELVCGAIRAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|225192981|dbj|BAH29681.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 252
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 11 QAADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGW 66
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GW
Sbjct: 119 SAADCQYWERLLAKECRLYRLRNNHRISVAAASKLLCNM--MLGYRGMG-LSVGSMICGW 175
Query: 67 DKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLA 126
DK EG +Y V GT + G G+SY YG D +KE MT EEA +L + ++ A
Sbjct: 176 DK-EGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGRRGIAHA 234
Query: 127 IARDGASGGVV 137
RD SGG V
Sbjct: 235 THRDAYSGGSV 245
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 26 LHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG-MIVGGWDKYEGGKIYGVPLGGTII 84
L++ T+ G+ +VK A L+ + +K F G +VGG+D E +++ V + G I
Sbjct: 72 LYKSTV--GKEMSVKALATLLANILNGSKYFPYLGWFLVGGYD--EKPRLFSVDMVGGIT 127
Query: 85 EQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINS 144
E +A GSG + Y D ++E M+ + +L VKA+++AI RD +G + VTI
Sbjct: 128 EDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITK 187
Query: 145 EG 146
+G
Sbjct: 188 DG 189
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 12 AADSQTVSDYVRYF-----LHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG-MIVGG 65
A D + + VR L++ T+ G+ +VK A L+ + +K F G +VGG
Sbjct: 56 AGDVGDILNLVRLLKAEANLYKSTV--GKEMSVKALATLLANILNGSKYFPYLGWFLVGG 113
Query: 66 WDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 125
+D E +++ V + G I E +A GSG + Y D ++E M+ + +L VKA+++
Sbjct: 114 YD--EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINV 171
Query: 126 AIARDGASGGVVRTVTINSEG 146
AI RD +G + VTI +G
Sbjct: 172 AIKRDVFTGDGLLVVTITKDG 192
>gi|145548529|ref|XP_001459945.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427772|emb|CAK92548.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q Y+ + ++ G +V A+ ++ L+ Y N L G ++ G D
Sbjct: 61 AADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYKNSG-LSMGCMIAGTD-L 118
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
G +Y + G ++ GSGS+Y YG D ++ ++ EA +L V+A+ A R
Sbjct: 119 SGQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHR 178
Query: 130 DGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLL 171
D ASGGVVR I+ G + K + G + H + Q L+
Sbjct: 179 DTASGGVVRVYHIHQNGWT-KVHDGIDVVDLHYKFAQQKGLV 219
>gi|118789882|ref|XP_317882.3| AGAP011423-PA [Anopheles gambiae str. PEST]
gi|116122785|gb|EAA13087.3| AGAP011423-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + L H + G+ V VA +++ + + ++ +++GG D G
Sbjct: 88 AADTEMTTQMIASNLELHRLNTGRTVPVVVANTMLKQFLFRYQGYVSAALVLGGVDT-TG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + G+ + P+A GSGS F+ WK M++EE ++LV A++ + D
Sbjct: 147 SYIYCIYPHGSTDKLPYATMGSGSLAAMSVFESRWKPDMSEEEGKKLVRDAIAAGVFNDL 206
Query: 132 ASGGVVRTVTINSEGV 147
SG + I +
Sbjct: 207 GSGSNIDLCVIRKDAT 222
>gi|47228090|emb|CAF97719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + Y K L G +V GWDK G Y G + FA+G SGS
Sbjct: 143 SVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDSEGNRVCGDLFAVG-SGSM 201
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
Y YG D + ++ EEA +L +A+ A RD SGG V ++SEG +R
Sbjct: 202 YAYGVMDSGLRHDLSVEEACELGRRAIYQATYRDAYSGGQVNLYHVHSEGWTR 254
>gi|217072416|gb|ACJ84568.1| unknown [Medicago truncatula]
Length = 271
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE ++++E +LV +++ I D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVAESICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|168019333|ref|XP_001762199.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686603|gb|EDQ72991.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 2 NIDCLRLLFQAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGM 61
NI C AAD++ V+D V L H G+ + V A +++ + + + +
Sbjct: 80 NISCCGA-GTAADTENVTDMVSSQLVLHRYATGRESRVVTALTMLKSHLFRYQGQVSAAL 138
Query: 62 IVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVK 121
++GG D G ++ V G+ PFA GSGS F+ +KE +TKEE ++V
Sbjct: 139 VLGGVD-VTGPHLHAVYPHGSTDTLPFATMGSGSLAAMSVFESRYKENLTKEEGMEIVSA 197
Query: 122 AVSLAIARDGASGGVVRTVTINSEG 146
A+ I D SG V I EG
Sbjct: 198 AICAGIFNDLGSGSNVDLCIITKEG 222
>gi|71033575|ref|XP_766429.1| proteasome subunit beta type 7 precursor [Theileria parva strain
Muguga]
gi|68353386|gb|EAN34146.1| proteasome subunit beta type 7 precursor, putative [Theileria
parva]
Length = 262
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 35 QPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSG 94
QP + LV L + + + Q +I+GG+D Y G ++ V G+ PF GSG
Sbjct: 104 QPRAQMCISMLVHEL-FKYQGYKQCALILGGFD-YTGPHLFSVSPHGSSDSLPFCTMGSG 161
Query: 95 SSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV--SRKF 151
S +Q + +GM+ EEA +L VKA+S I D SGG V V ++ G SR F
Sbjct: 162 SLNAMTVLEQNYFDGMSVEEAVELAVKAISAGITNDLGSGGNVDVVVLDKNGSKHSRTF 220
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGG 72
D+Q + V + ++ + T+K A L+ L+ N + +++GG DK G
Sbjct: 60 DAQQLVRLVSVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDK-NGP 118
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
IY + P+GG+I E + GSGS YG + ++E + +E L ++A+ A RD
Sbjct: 119 AIYSLDPMGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDS 178
Query: 132 ASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLD 172
ASG + V I E R L EE++ + +LL+
Sbjct: 179 ASGENIDVVVITKEAFKR---------LDPEEVKSRRALLN 210
>gi|123450195|ref|XP_001313725.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121895618|gb|EAY00796.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 275
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 19/183 (10%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV--RLLSYNNKNFLQTGMIVGGWDKY 69
AAD+ ++ + L + G V N++ RL Y ++Q +IVGG D +
Sbjct: 80 AADNDNINAVISAKLRLFQMNTGLQPRVDQCTNILASRLFQY--MGYIQAALIVGGID-F 136
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+G ++Y V G+ +QPF GSGS + W M + + ++V A+ I
Sbjct: 137 QGPQVYQVAPHGSFSKQPFIAQGSGSLAAISVLENRWHNKMNEHDCMEMVADAIYAGITN 196
Query: 130 DGASGGVVRTVTINSEGVSRK-------FYPGDTLPLWHE-----ELEPQNSLLDMMNVA 177
D SG V I E K FY +P HE LEPQ + +D+ +
Sbjct: 197 DLGSGSHVNLCVIKRENPEDKQSKVIYTFYKDYRVP--HENDRNFRLEPQINNIDVEVIK 254
Query: 178 SPE 180
+ E
Sbjct: 255 TTE 257
>gi|68069847|ref|XP_676835.1| 20S proteasome beta subunit [Plasmodium berghei strain ANKA]
gi|56496705|emb|CAH96419.1| 20S proteasome beta subunit, putative [Plasmodium berghei]
Length = 269
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Y+ + + ++ + +V+ A+ ++ + Y K + L G+I+ G+D +
Sbjct: 107 AADCFYWEKYLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYD-HT 165
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G ++ + G +E GSGS+Y Y D A+ ++ ++A +L A+ A RD
Sbjct: 166 GFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVDQAVELGRNAIYHATFRD 225
Query: 131 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEP 166
G SGG VR I+ G S+ D L + P
Sbjct: 226 GGSGGKVRVFYIHKNGYSKIIEGEDVYDLHYHYTNP 261
>gi|326427299|gb|EGD72869.1| LMP X protein [Salpingoeca sp. ATCC 50818]
Length = 292
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 31 IQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFA 89
++ G+ +V A+ ++ + Y+ + L G ++ GWDK G Y G + F+
Sbjct: 147 LRNGERISVAAASKILANIVYHYRGMGLSMGTMICGWDKKGPGLFYVDSDGTRLTNNLFS 206
Query: 90 IGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSR 149
+G SGS+Y YG D ++ ++ EEA +L +A+ A RD SGG + + G R
Sbjct: 207 VG-SGSTYAYGVLDAGYRWDLSVEEAHELARRAIYHATFRDAYSGGHINLYHMKETGWER 265
Query: 150 KFYPGDTLPLWHE 162
D PL +E
Sbjct: 266 ILNMQDVGPLHYE 278
>gi|268570046|ref|XP_002640679.1| C. briggsae CBR-PBS-5 protein [Caenorhabditis briggsae]
Length = 284
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK-NFLQTGMIVGGWDKYE 70
AAD Q + V + + ++ TV A+ + Y + L G +V G+DK +
Sbjct: 120 AADCQFWTRIVAKYCTLYELREKNSITVSAASKYFANVLYGYRGQGLSVGSMVAGYDK-K 178
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +I+ V G + GSGS YG D +K MT EEA +L ++A+ A RD
Sbjct: 179 GPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDEEARKLGLRAIMHATYRD 238
Query: 131 GASGGVVRTVTIN-SEGVSRKFYPGDTLPLWHE 162
SGGV I +E + + P D LW+E
Sbjct: 239 SGSGGVCNLCHITPTEKI--RLPPMDVSKLWYE 269
>gi|388498812|gb|AFK37472.1| unknown [Medicago truncatula]
Length = 271
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+D V L H G+ + V A L++ +N + + +++GG D G
Sbjct: 87 AADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVD-ITG 145
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ PFA GSGS F+ +KE ++++E +LV +++ I D
Sbjct: 146 PHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVAESICAGIFNDL 205
Query: 132 ASGGVVRTVTIN 143
SG V I
Sbjct: 206 GSGSNVDVCVIT 217
>gi|301757125|ref|XP_002914391.1| PREDICTED: proteasome subunit beta type-8-like [Ailuropoda
melanoleuca]
gi|281338481|gb|EFB14065.1| hypothetical protein PANDA_002294 [Ailuropoda melanoleuca]
Length = 276
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYE 70
AAD Q + + ++ G+ +V A+ L+ + + + L G ++ GWDK +
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVFQYRGMDLSMGSMICGWDK-K 179
Query: 71 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 130
G +Y V GT + GSG++Y YG D ++ ++ EEA +L +A+ A RD
Sbjct: 180 GPGLYYVDADGTRLSGDMFSTGSGNTYAYGVMDSGYRPDLSPEEAYELGRRAIVYATHRD 239
Query: 131 GASGGVVRTVTINSEG 146
SGGVV + +G
Sbjct: 240 SYSGGVVNMYHVMEDG 255
>gi|401883133|gb|EJT47367.1| proteasome subunit, beta type, 7 [Trichosporon asahii var. asahii
CBS 2479]
gi|406702501|gb|EKD05517.1| proteasome subunit, beta type, 7 [Trichosporon asahii var. asahii
CBS 8904]
Length = 282
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 26 LHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIE 85
L H++ G+PA V A +++ Y + + ++VGG D G +++ V G+ +
Sbjct: 84 LELHSLSQGRPARVVTAMTMLKQYLYRYQGHIGAYLVVGGVDA-TGPQLFTVHAHGSTDK 142
Query: 86 QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSE 145
P+ GSGS F+ A+KE MT++EA LV +A+ + D SG V I
Sbjct: 143 LPYVTMGSGSLAAMAIFESAYKENMTRKEAIDLVARAIRSGVFNDLGSGSNVDVCVITKS 202
Query: 146 GV 147
G
Sbjct: 203 GT 204
>gi|972986|gb|AAA75035.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|972988|gb|AAA75036.1| 20S proteasome subunit Lmp7 [Mus musculus]
gi|15489383|gb|AAH13785.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
multifunctional peptidase 7) [Mus musculus]
Length = 276
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKY 69
AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK- 178
Query: 70 EGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIAR 129
+G +Y V GT + GSG++Y YG D +++ ++ EEA L +A++ A R
Sbjct: 179 KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHR 238
Query: 130 DGASGGVVRTVTINSEG 146
D SGGVV + +G
Sbjct: 239 DNYSGGVVNMYHMKEDG 255
>gi|330791343|ref|XP_003283753.1| proteasome subunit beta type 7 [Dictyostelium purpureum]
gi|325086376|gb|EGC39767.1| proteasome subunit beta type 7 [Dictyostelium purpureum]
Length = 274
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + L H + G+ V A +++ + + + + +I+GG D G
Sbjct: 83 AADTENATALISSKLKLHKLSTGRQTRVTTALTMLKQMLFKYQGHVSAALILGGID-ING 141
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++ + G+ + P+ GSGS F+ +K M K+EA LV +A+S I D
Sbjct: 142 PSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKSNMNKQEAIDLVAEAISSGIFNDL 201
Query: 132 ASGGVVRTVTINSEGVS----------RKF-------YPGDTLPL 159
SG I + GV+ RKF +P +T P+
Sbjct: 202 GSGSNCDVTVIENSGVTVLRNYQTPNERKFRNNLAYVFPANTTPV 246
>gi|147899854|ref|NP_001084323.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional peptidase 7) [Xenopus laevis]
gi|971307|dbj|BAA07945.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|38014491|gb|AAH60388.1| PSMB8 protein [Xenopus laevis]
Length = 271
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 12 AADSQ----TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 67
AAD Q ++ R + ++ ++ A K+ N+ +L Y L G ++ GWD
Sbjct: 115 AADCQYWERLLAKECRLYQLRNNSRISVSAASKLMCNM--MLQYRGTG-LSVGSMICGWD 171
Query: 68 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 127
K +G +Y V GT + GSG+SY YG D ++ +T EEA L +A+S A
Sbjct: 172 K-KGPGLYYVDDNGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYAT 230
Query: 128 ARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQN 168
RD SGG V + +G K D L H+ E +N
Sbjct: 231 HRDAYSGGCVNLYHMKEDGWV-KIGQFDVSDLLHKFTEEKN 270
>gi|242011050|ref|XP_002426270.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
gi|212510333|gb|EEB13532.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
Length = 271
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 38 TVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSS 96
+V A+ L+ + YN K L GM++ GWDK G +Y V GT GSGS
Sbjct: 138 SVAAASKLMTNMVYNYKGMGLSMGMMIAGWDK-RGASLYYVSDDGTRTSGNVFSVGSGSI 196
Query: 97 YLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEG 146
Y +G D +K + +EA L +++ A RD SGG++R I G
Sbjct: 197 YAFGVLDTGYKWDLEDKEAYDLAQRSIYHATYRDAYSGGIIRVYHIKETG 246
>gi|50540152|ref|NP_001002543.1| proteasome subunit beta type-10 [Danio rerio]
gi|49903016|gb|AAH76265.1| Zgc:92791 [Danio rerio]
Length = 276
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + + H++ G+P V + ++ + + + + + +IVGG D G
Sbjct: 91 AADAEVTTQMMSSSVELHSLSTGRPPLVAMVTRQLKQMLFRYQGHIGSSLIVGGVD-VNG 149
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y V G+ + PF GSG++ F+ +K M EEA+QLV A++ I D
Sbjct: 150 AQLYSVYPHGSYDKLPFLTMGSGAASAISVFEDRYKPNMELEEAKQLVRDAITAGIFCDL 209
Query: 132 ASGGVVRTVTINSEGV 147
SG V I + V
Sbjct: 210 GSGSNVDLCVITDKKV 225
>gi|440905426|gb|ELR55803.1| Proteasome subunit beta type-10 [Bos grunniens mutus]
Length = 273
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ + + H + G+ V ++R + + + ++ +IVGG D + G
Sbjct: 88 AADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQMLFRYQGYVGASLIVGGVD-FTG 146
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y V G+ PF GSG + ++ MT E A++L+V+A++ I D
Sbjct: 147 PQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDL 206
Query: 132 ASGGVVRTVTINSEG 146
SGG V I + G
Sbjct: 207 GSGGNVDACVITAAG 221
>gi|407847492|gb|EKG03188.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 292
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V++ V L H + G+ + V A +++ Y + + +++GG D EG
Sbjct: 115 AADTEAVTNMVSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGHVSAALVLGGVD-VEG 173
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+ V G+ PF GSGS + +KE MT EEA++LV A+ I D
Sbjct: 174 PFLATVAPHGSTDRLPFVSMGSGSIAAMSALETGYKENMTLEEAKELVASAIRKGIFNDP 233
Query: 132 ASGGVVRTVTINSEGV----------SRKF------YPGDTLPLWHEELEPQNSLLDM 173
SG V I RK+ +P T P+ EE+ ++ D+
Sbjct: 234 YSGTQVDLCVITKTKTELLIGYDKPNERKYPKQEIRFPPGTTPVLREEIRRLVTITDV 291
>gi|71659830|ref|XP_821635.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|70887019|gb|EAN99784.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 302
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V++ V L H + G+ + V A +++ Y + + +++GG D EG
Sbjct: 125 AADTEAVTNMVSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGHVSAALVLGGVD-VEG 183
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+ V G+ PF GSGS + +KE MT EEA++LV A+ I D
Sbjct: 184 PFLATVAPHGSTDRLPFVSMGSGSIAAMSALETGYKENMTLEEAKELVASAIRKGIFNDP 243
Query: 132 ASGGVVRTVTINSEGV----------SRKF------YPGDTLPLWHEELEPQNSLLDM 173
SG V I RK+ +P T P+ EE+ ++ D+
Sbjct: 244 YSGTQVDLCVITKTKTELLIGYDKPNERKYPKQEIRFPPGTTPVLREEIRQLVTITDV 301
>gi|284164848|ref|YP_003403127.1| proteasome endopeptidase complex subunit beta [Haloterrigena
turkmenica DSM 5511]
gi|302595690|sp|D2RQX3.1|PSB1_HALTV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|284014503|gb|ADB60454.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
turkmenica DSM 5511]
Length = 243
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 32 QLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIG 91
Q+ A +A N R F I+GG D+ EG +Y + G ++E + +
Sbjct: 122 QMSIDALATLAGNFAR-----GGPFFAIHPILGGVDE-EGSHVYSIDPAGGVMEDDYTVT 175
Query: 92 GSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
GSG YG +QA++E M+ EEA + + A+ RD SG V I EGV
Sbjct: 176 GSGMQLAYGHLEQAYEEDMSNEEAVSVAAHGIKSAVERDTGSGNGVFLCEITDEGV 231
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 14 DSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGG 72
D+Q + + H + ++ +P T+K + L +LS L ++VGG DK G
Sbjct: 60 DAQQIVRVMSVESHLYKMRRKEPMTIKGITTLLSNILSGQRYYPLMVQLLVGGVDK-NGP 118
Query: 73 KIYGV-PLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
I+ + LGGTI E GSGS YG + + +G++ EE +L ++A+ A+ RD
Sbjct: 119 AIFSLDALGGTIEETKAVATGSGSPMAYGVLEDRFVDGLSIEEGVELAIRALHNAMKRDS 178
Query: 132 ASGGVVRTVTINSEGVSR 149
ASG + V I ++ R
Sbjct: 179 ASGNGIDVVVITADKFDR 196
>gi|301624029|ref|XP_002941310.1| PREDICTED: proteasome subunit beta type-7-like [Xenopus (Silurana)
tropicalis]
Length = 279
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
AAD++ V+ + LH H + G+ V A +++ Y + + +IVGG D +G
Sbjct: 93 AADAENVTQLLSSNLHIHAMTTGRQPRVCTANRILKQFLYRYQGHIGASIIVGGVD-IKG 151
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
++Y + G+ PF GSGS+ + +K M EE ++LV +A++ I D
Sbjct: 152 PQLYSIYPHGSTDRVPFTALGSGSAAAIAVLEDRFKPNMELEEGKRLVTEAITAGIMCDL 211
Query: 132 ASGGVVRTVTINSE 145
SG V I E
Sbjct: 212 GSGSGVDLCIITKE 225
>gi|146101733|ref|XP_001469191.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|398023611|ref|XP_003864967.1| proteasome beta 2 subunit, putative [Leishmania donovani]
gi|134073560|emb|CAM72293.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|322503203|emb|CBZ38287.1| proteasome beta 2 subunit, putative [Leishmania donovani]
Length = 254
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 20/181 (11%)
Query: 12 AADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEG 71
+AD++ V++ V L H ++ G+ + V A L++ Y + + +++GG D EG
Sbjct: 78 SADTEAVTNMVSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGHVSAALVLGGVD-VEG 136
Query: 72 GKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDG 131
+ + G+ PF GSGS + A+K+ MT EEA++LV A+ I D
Sbjct: 137 PFLATIAPHGSTDRLPFVTMGSGSIAAMAQLEVAYKDNMTCEEAKELVTSAIHKGIFNDP 196
Query: 132 ASGGVVRTVTINSEGV---------SRKFYPGD-------TLPLWHEELEPQNSLLDMMN 175
SG V I + +++ +P T P+ EE+ L+D+++
Sbjct: 197 YSGTQVDVCVITKDKTELMIGYDTPNKRMHPRQEVMLPPGTTPVLKEEIR---HLVDIVD 253
Query: 176 V 176
V
Sbjct: 254 V 254
>gi|300122116|emb|CBK22690.2| unnamed protein product [Blastocystis hominis]
Length = 273
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 29 HTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIE-- 85
+ ++ G+ +V A+ ++ Y+ K++ L G ++ GWDK G +I+ V GT ++
Sbjct: 132 YELRNGERISVAAASKILSDFLYHYKDYGLSVGTMICGWDK-TGPQIFYVDNDGTRLKAD 190
Query: 86 --QPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 143
+ + GSGSSY Y DQ + MT +EA L +A+ A RD SGG+ I
Sbjct: 191 EKRSYFSVGSGSSYAYAVLDQLYHYDMTDDEAIDLGRRAIYHATHRDAMSGGINNVYLIK 250
Query: 144 SEG 146
EG
Sbjct: 251 PEG 253
>gi|448397943|ref|ZP_21569881.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
limicola JCM 13563]
gi|445672159|gb|ELZ24736.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
limicola JCM 13563]
Length = 243
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 56 FLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEA 115
F I+GG D EG +Y + G ++E + + GSG YG +QA+++ M+ EEA
Sbjct: 141 FFAIHPILGGVDD-EGSHVYSIDPAGGVMEDDYTVTGSGMQLAYGHLEQAYEDDMSNEEA 199
Query: 116 EQLVVKAVSLAIARDGASGGVVRTVTINSEGV 147
+ + + + A+ RD SG V I EGV
Sbjct: 200 KTVAARGIKSAVERDTGSGNGVFLCEITDEGV 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,060,340,476
Number of Sequences: 23463169
Number of extensions: 130093761
Number of successful extensions: 360522
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2327
Number of HSP's successfully gapped in prelim test: 805
Number of HSP's that attempted gapping in prelim test: 357304
Number of HSP's gapped (non-prelim): 3149
length of query: 184
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 51
effective length of database: 9,238,593,890
effective search space: 471168288390
effective search space used: 471168288390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)