Query 029968
Match_columns 184
No_of_seqs 111 out of 592
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 10:03:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e50_A Protein SET; histone ch 100.0 1.3E-53 4.5E-58 350.7 13.4 183 1-184 1-191 (225)
2 3fs3_A Nucleosome assembly pro 100.0 4.7E-48 1.6E-52 333.9 17.4 173 12-184 40-239 (359)
3 2ayu_A Nucleosome assembly pro 100.0 1.3E-47 4.5E-52 338.1 16.4 172 13-184 82-314 (417)
4 3kyp_A Pfnaps, nucleosome asse 100.0 3.7E-47 1.3E-51 306.0 10.5 156 27-184 2-159 (193)
5 2zd7_A VPS75, vacuolar protein 100.0 1.5E-41 5E-46 284.9 11.7 156 29-184 10-181 (264)
6 2jo8_A Serine/threonine-protei 95.6 0.036 1.2E-06 34.5 5.7 37 30-66 12-48 (51)
7 2p2u_A HOST-nuclease inhibitor 92.9 0.26 8.9E-06 38.0 6.6 58 19-76 14-71 (171)
8 2zd7_A VPS75, vacuolar protein 71.7 10 0.00035 30.9 6.7 43 21-63 9-51 (264)
9 3vem_A Helicase protein MOM1; 43.8 86 0.0029 22.4 6.9 43 38-83 60-105 (115)
10 2jee_A YIIU; FTSZ, septum, coi 42.5 54 0.0019 22.0 5.1 32 14-45 6-37 (81)
11 3vem_A Helicase protein MOM1; 40.7 76 0.0026 22.6 5.9 41 30-70 63-103 (115)
12 3bhp_A UPF0291 protein YNZC; N 39.8 39 0.0013 21.4 3.8 44 19-63 2-45 (60)
13 2fzt_A Hypothetical protein TM 39.5 28 0.00096 23.1 3.2 25 51-75 15-39 (79)
14 3jux_A Protein translocase sub 36.7 62 0.0021 30.7 6.2 45 28-72 621-665 (822)
15 4afl_A P29ING4, inhibitor of g 33.3 58 0.002 22.2 4.3 30 14-43 11-40 (104)
16 2jvd_A UPF0291 protein YNZC; s 32.7 47 0.0016 20.6 3.3 40 20-60 3-42 (54)
17 1nkt_A Preprotein translocase 31.9 84 0.0029 30.2 6.4 45 28-72 651-695 (922)
18 2fsf_A Preprotein translocase 31.6 82 0.0028 30.0 6.2 45 28-72 617-661 (853)
19 2ipc_A Preprotein translocase 30.3 93 0.0032 30.1 6.4 45 28-72 732-776 (997)
20 1tf5_A Preprotein translocase 28.7 1E+02 0.0035 29.3 6.4 43 29-71 580-622 (844)
21 3na7_A HP0958; flagellar bioge 27.8 2.1E+02 0.007 22.6 7.3 18 58-75 158-175 (256)
22 4h22_A Leucine-rich repeat fli 26.4 1.7E+02 0.0057 20.4 5.7 13 59-71 77-89 (103)
23 2hep_A UPF0291 protein YNZC; S 24.4 79 0.0027 21.4 3.5 41 20-61 3-43 (85)
24 2ke4_A CDC42-interacting prote 22.6 1.9E+02 0.0065 19.8 5.9 32 14-50 6-37 (98)
No 1
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=100.00 E-value=1.3e-53 Score=350.69 Aligned_cols=183 Identities=39% Similarity=0.751 Sum_probs=150.3
Q ss_pred CCCCccccchhccc-----cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhccCcc
Q 029968 1 MVADKGKKTKVEEE-----NAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPD 75 (184)
Q Consensus 1 ~~~~~~~~~~~~~e-----~~~~~~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~Ip~ 75 (184)
|++|.+|+.|+.++ +....+++++.++++|+.||.+++.+++++++|+++|+++|+++++|+|++|++||++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~~~Ply~kR~eII~~IP~ 80 (225)
T 2e50_A 1 MSAQAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPN 80 (225)
T ss_dssp CHHHHHHHHHHHTTC-----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred CCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcccc
Confidence 78899999999764 4457889999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhcCccccccCChhhHhhhcccceeEEEEecCCCcceEEEEEeCCCCcccCCeEEEEEEeeCCCCCceeeeeccc
Q 029968 76 FWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIK 155 (184)
Q Consensus 76 FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ve~~~~~~~~f~i~F~F~~N~yF~N~~L~K~~~~~~~~g~~~~~~t~I~ 155 (184)
||++||.||+.++++|++.|+++|+||+||+|+++.++..||+|+|+|.+||||+|++|+|+|++.. +|.+++++|+|+
T Consensus 81 FW~tal~n~~~l~~~i~e~De~iL~~L~dI~v~~~~d~~~gf~i~F~F~~N~yF~N~vLtK~y~~~~-~g~~~s~~t~I~ 159 (225)
T 2e50_A 81 FWVTTFVNHPQVSALLGEEDEEAMHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHMNE-SGDPSSKSTEIK 159 (225)
T ss_dssp HHHHHHHTSHHHHTTCCHHHHHHGGGEEEEEEEECCSSCCCEEEEEEECSCSSBSCSEEEEEEC--------CEEECCCC
T ss_pred HHHHHHhcChhhhhhccHhHHHHHHhcCeeEEEEccCCCCceEEEEEeCCCCCccCCEEEEEEEecC-CCCcccCCCcce
Confidence 9999999999999999999999999999999999988789999999999999999999999999988 888899999999
Q ss_pred ccCCCCCCCcceeccC--CCCccCC-CCCCCC
Q 029968 156 WKEGMGIPNGVNHEKK--GNKRPLA-EERLVF 184 (184)
Q Consensus 156 Wk~gk~~t~~~~~~k~--~~~~~~~-~~sfF~ 184 (184)
||+|+|+|+++..+++ |++|... ..|||+
T Consensus 160 Wk~gkd~t~~~~~kk~~~~~~r~~~~~~SFF~ 191 (225)
T 2e50_A 160 WKSGKDMTKRSSQTQNKASRKRQHEEPESFFT 191 (225)
T ss_dssp BCSSCCC----------------------CGG
T ss_pred ecCCCCccchhhhhcccccCcccCCCCCCcce
Confidence 9999999999877644 4455533 689995
No 2
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=100.00 E-value=4.7e-48 Score=333.92 Aligned_cols=173 Identities=25% Similarity=0.508 Sum_probs=140.9
Q ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhc----------cCcchHHHHH
Q 029968 12 EEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIK----------SIPDFWLTAF 81 (184)
Q Consensus 12 ~~e~~~~~~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~----------~Ip~FW~~vl 81 (184)
+.+++..+|+.|+++|.+|+.||.+++.+++++++++++|+++|+++++|+|++|++||+ +||+||++||
T Consensus 40 ~~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~qPLyeKR~eII~G~~e~e~~~kgIP~FWltvl 119 (359)
T 3fs3_A 40 YDDKMTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREALVGNGEAKIGTPNLPEFWLRAL 119 (359)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSSSTTSTTHHHHHH
T ss_pred hhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccccccccCCCCcHHHHHH
Confidence 458889999999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred hcCccccccCChhhHhhhcccceeEEEEec---CCCcceEEEEEeCCCCcccCCeEEEEEEeeCC--CCCc---eeeeec
Q 029968 82 ISHPALGELLSEEDQKIFRYLSSLEVEDFK---DVKSGYSITFNFSPNPYFEDNKLTKTFTFLDD--DGSM---KITATS 153 (184)
Q Consensus 82 ~n~~~l~~~i~~~D~~iL~~L~dI~ve~~~---~~~~~f~i~F~F~~N~yF~N~~L~K~~~~~~~--~g~~---~~~~t~ 153 (184)
.||+.++.+|++.|+++|+||+||+|+++. ++++||+|+|+|.+||||+|++|+|+|++... +|++ .+++|+
T Consensus 120 ~Nhp~ls~~I~e~De~iL~yL~DI~Ve~l~~~~~~~~gfkI~F~F~eNpYF~N~vLtKey~l~~~~~~~dp~~~~se~t~ 199 (359)
T 3fs3_A 120 RNNNTVSHVIEDHDEEILVYLNDIRCDYIKKNKEKKEGFILSFYFATNPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATV 199 (359)
T ss_dssp HTSHHHHTTCCHHHHHHHTTEEEEEEEECC-------CEEEEEEECSCSSBCCSEEEEEEEEC--------CEEEEEECC
T ss_pred HhchHHHHhccHhHHHHHhhcceeEEEEeccCCCCCCceEEEEEeCCCCcccCCEEEEEEEEeccCCCCCcccccceeee
Confidence 999999999999999999999999999863 56899999999999999999999999999852 2332 479999
Q ss_pred ccccCCCCCCCcceeccCCCCcc---------CCCCCCCC
Q 029968 154 IKWKEGMGIPNGVNHEKKGNKRP---------LAEERLVF 184 (184)
Q Consensus 154 I~Wk~gk~~t~~~~~~k~~~~~~---------~~~~sfF~ 184 (184)
|+||+|+|+|+++++||+++|++ ++.+|||+
T Consensus 200 I~WK~GKdlT~k~~~kKqr~K~t~~~R~v~k~~~~eSFFn 239 (359)
T 3fs3_A 200 IDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFH 239 (359)
T ss_dssp CCBCTTCCTTCC----------------------CCCGGG
T ss_pred eeEeCCCccchhhhhhhccccCCCCceeeeccCCCCCcee
Confidence 99999999999998887766542 35789995
No 3
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=100.00 E-value=1.3e-47 Score=338.09 Aligned_cols=172 Identities=26% Similarity=0.555 Sum_probs=156.5
Q ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhh----------------------
Q 029968 13 EENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII---------------------- 70 (184)
Q Consensus 13 ~e~~~~~~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI---------------------- 70 (184)
.+|+.++|+.|+++|.+|+.||.++..+++++++++++|+++|+++++|+|++|++||
T Consensus 82 ~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~ef~~ev~eLE~Ky~~~~~PLy~KR~eII~G~~ept~eE~~~~~~~~~~~~ 161 (417)
T 2ayu_A 82 SGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEIVESLN 161 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHTT
T ss_pred cchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCchhhhcccccccchhh
Confidence 4789999999999999999999999999999999999999999999999999999998
Q ss_pred ---------------------ccCcchHHHHHhcCccccccCChhhHhhhcccceeEEEEecCCCcceEEEEEe--CCCC
Q 029968 71 ---------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNF--SPNP 127 (184)
Q Consensus 71 ---------------------~~Ip~FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ve~~~~~~~~f~i~F~F--~~N~ 127 (184)
+|||+||++||.||+.++.+|+++|+++|+||+||+|+++.++..||+|+|+| .+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~kgIP~FWltalkN~~~lse~I~e~De~iLk~L~DI~Ve~~~d~~~gF~L~F~F~~~~Np 241 (417)
T 2ayu_A 162 ETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLEYLTDGRPGFKLLFRFDSSANP 241 (417)
T ss_dssp CGGGCCSSCC---------CCSSCTTHHHHHHHTSTTGGGTCCHHHHTGGGGEEEEECCBCCSSSCEEEEEEEECTTTCS
T ss_pred hhhhhhhhhhhcccccccccccCCccHHHHHHHcChHHHHhhhhhhHHHHhhccceEEEEccCCCcceEEEEEeCCCCCc
Confidence 58999999999999999999999999999999999999998778899999999 9999
Q ss_pred cccCCeEEEEEEeeCC---CCCc---eeeeecccccC-CCCCCCcceeccCCCCcc---------CCCCCCCC
Q 029968 128 YFEDNKLTKTFTFLDD---DGSM---KITATSIKWKE-GMGIPNGVNHEKKGNKRP---------LAEERLVF 184 (184)
Q Consensus 128 yF~N~~L~K~~~~~~~---~g~~---~~~~t~I~Wk~-gk~~t~~~~~~k~~~~~~---------~~~~sfF~ 184 (184)
||+|++|||+|++..+ +|+. .+++|+|+||+ |+|||+++++||+++|++ ++..|||+
T Consensus 242 YF~N~vLtKtY~~~~e~~~~g~~~~~~~egt~I~WK~~GknlT~k~~kkKqr~K~~~~~R~v~k~v~~~SFFn 314 (417)
T 2ayu_A 242 FFTNDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIESFFN 314 (417)
T ss_dssp SBCCSEEEEEEEEESSCCSSSSCEEEEEEECCCCBSCTTTCTTEEEEECCC---------CCEEEEECCCGGG
T ss_pred cccCCeEEEEEEEeccCCCCCCcccccccCcceeeecCCCCcchhhhhhcccccCCCcccccccCCCCCCcee
Confidence 9999999999999863 2554 47999999999 999999999988766532 45789996
No 4
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=100.00 E-value=3.7e-47 Score=305.97 Aligned_cols=156 Identities=29% Similarity=0.596 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhccCcchHHHHHhcCccccccCChhhHhhhcccceeE
Q 029968 27 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLE 106 (184)
Q Consensus 27 i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~Ip~FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ 106 (184)
+++|++||.+++.+++++++++++|+++|+++++|+|++|++||++||+||++||.||+.++.++ +.|+++|+||+||+
T Consensus 2 ~~~L~~iQ~e~~~l~~~~~~e~~~le~ky~~~~~p~y~kR~~iI~~IP~FW~t~l~n~~~ls~i~-~~De~~L~~L~di~ 80 (193)
T 3kyp_A 2 MQDFEDIQKDIEQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEIIQKIPGFWANTLRKHPALSDIV-PEDIDILNHLVKLD 80 (193)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTHHHHTTSSSSTTSS-CHHHHTTCCCCEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHhcCCccHHHHHHHcCchHHHHH-HhhHHHHcCcceEE
Confidence 47899999999999999999999999999999999999999999999999999999999999865 79999999999999
Q ss_pred EEEecCCCcceEEEEEeCC--CCcccCCeEEEEEEeeCCCCCceeeeecccccCCCCCCCcceeccCCCCccCCCCCCCC
Q 029968 107 VEDFKDVKSGYSITFNFSP--NPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEERLVF 184 (184)
Q Consensus 107 ve~~~~~~~~f~i~F~F~~--N~yF~N~~L~K~~~~~~~~g~~~~~~t~I~Wk~gk~~t~~~~~~k~~~~~~~~~~sfF~ 184 (184)
|++..+++.||+|+|+|++ ||||+|++|+|+|++.. +|+.++++|+|+||+|+|+|++..+++++.+++.+..|||+
T Consensus 81 v~~~~~~~~gf~i~F~F~~n~N~yF~N~vLtK~y~~~~-~g~~~~~~t~I~Wk~gk~~t~~~~~kr~~~~~~~~~~SFF~ 159 (193)
T 3kyp_A 81 LKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDN-NQEKVVECTRIKWKEGKNPIAAVTHNRSDLDNEIPKWSIFE 159 (193)
T ss_dssp CBCCSSSSCCCEEEEECSCCSSCSCSCEEEECCCCCC-----CCCCCCCCCCCSSCCCCC--------------CCCTTT
T ss_pred EEEccCCCCceEEEEEEcCCCCccccCceEEEEEEEcC-CCCeeeccceeeeecCCCcchhhhhccccccccCCcchHhh
Confidence 9988777899999999998 89999999999999988 78888899999999999999887766665666778899996
No 5
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=100.00 E-value=1.5e-41 Score=284.94 Aligned_cols=156 Identities=23% Similarity=0.359 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhccCcchHHHHHhcCccccccCChhhHhhhcccceeEEE
Q 029968 29 KLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVE 108 (184)
Q Consensus 29 ~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~Ip~FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ve 108 (184)
+|..++.+++.++.++.++..+++++|+++++|+|++|++||++||+||++||.||+.++.+|++.|+++|+||+||+|+
T Consensus 10 ~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII~~IP~FWltal~n~~~l~~~I~e~De~iL~~L~dI~v~ 89 (264)
T 2zd7_A 10 EHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVE 89 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSTTGGGGSCGGGHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcchhHHHHHHHcChHHHhhcCHhhHHHHHhcCceEEE
Confidence 45556666666666666777889999999999999999999999999999999999999999999999999999999999
Q ss_pred Ee-----cCCCcceEEEEEeCC-CCcccCCeEEEEEEeeCC-CC--C--ceeeeecccccCCCCC-CCcceeccCC---C
Q 029968 109 DF-----KDVKSGYSITFNFSP-NPYFEDNKLTKTFTFLDD-DG--S--MKITATSIKWKEGMGI-PNGVNHEKKG---N 173 (184)
Q Consensus 109 ~~-----~~~~~~f~i~F~F~~-N~yF~N~~L~K~~~~~~~-~g--~--~~~~~t~I~Wk~gk~~-t~~~~~~k~~---~ 173 (184)
++ .++++||+|+|+|.+ ||||+|++|+|+|++... +| + +++++|+|+||+|+++ |...+++|+. +
T Consensus 90 ~~~~~~~~~~~~gf~i~F~F~~~NpyF~N~vLtK~y~~~~~~dg~~~~~~~s~~t~I~WK~g~~~~~~~~~~kk~~~~~~ 169 (264)
T 2zd7_A 90 WLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGK 169 (264)
T ss_dssp EGGGTCTTSCTTCEEEEEEECCBTTTBCCEEEEEEEEEECCSSSCCCCEEEECCCCCCCCGGGGGGCTTTCSCSSSHHHH
T ss_pred EecccccCCCCCceEEEEEeCCCCCCccCCeEEEEEEecccCCCCCCCceeEeecccccCCCccccchhhhhhccccccc
Confidence 96 566899999999999 999999999999999873 23 3 7889999999997655 4444443321 1
Q ss_pred Ccc-CCCCCCCC
Q 029968 174 KRP-LAEERLVF 184 (184)
Q Consensus 174 ~~~-~~~~sfF~ 184 (184)
++. ....|||+
T Consensus 170 ~~~r~~~~SFF~ 181 (264)
T 2zd7_A 170 KKYRQGMKTIFG 181 (264)
T ss_dssp HHHHHHHTSHHH
T ss_pred cccCCCCCCcce
Confidence 111 22478884
No 6
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=95.60 E-value=0.036 Score=34.55 Aligned_cols=37 Identities=24% Similarity=0.510 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Q 029968 30 LQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKR 66 (184)
Q Consensus 30 L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R 66 (184)
+.+|+..+..++.++++|+-++...|..+++|+.+.-
T Consensus 12 ~eEL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldAi 48 (51)
T 2jo8_A 12 VEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAI 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHhHhhHHHHH
Confidence 4567888899999999999999999999999998754
No 7
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=92.92 E-value=0.26 Score=38.01 Aligned_cols=58 Identities=12% Similarity=0.262 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhccCcch
Q 029968 19 IDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDF 76 (184)
Q Consensus 19 ~~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~Ip~F 76 (184)
--+++-.++..+..++.++..++..+..++.+++..|.....|+-++...+-..|-.|
T Consensus 14 ~~~~~~~alr~ia~l~r~~~~i~~~~n~eI~~ik~~~~~~~~~l~~~i~~l~~~l~~y 71 (171)
T 2p2u_A 14 DIRQAEGALAEIATIDRKVGEIEAQMNEAIDAAKARASQKSAPLLARRKELEDGVATF 71 (171)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3366888999999999999999999999999999999999999998887776655554
No 8
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=71.71 E-value=10 Score=30.91 Aligned_cols=43 Identities=19% Similarity=0.168 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 029968 21 SELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVY 63 (184)
Q Consensus 21 ~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply 63 (184)
.+++.++.+|..||.++..++.++.++..++.+-+..+++.+.
T Consensus 9 ~~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII 51 (264)
T 2zd7_A 9 NEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYI 51 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 4688899999999999999999999999888776666555444
No 9
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=43.84 E-value=86 Score=22.38 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh---HHhhhhhhccCcchHHHHHhc
Q 029968 38 EKINEEASEKVLEVEQKYSEIRKPV---YDKRNDIIKSIPDFWLTAFIS 83 (184)
Q Consensus 38 ~~l~~e~~~e~~~le~k~~~~~~Pl---y~~R~~iI~~Ip~FW~~vl~n 83 (184)
..|..+|++|+.++.++|+.+++-+ |.++. +.+...-..|+.|
T Consensus 60 lqLkse~e~E~ae~k~KYD~~lqe~ese~~~kk---K~le~~~~kV~mN 105 (115)
T 3vem_A 60 SILKAELERKMAEVQAEFRRKFHEVEAEHNTRT---TKIEKDKNLVIMN 105 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 3455667888888888888776543 23322 2334445556654
No 10
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=42.46 E-value=54 Score=21.97 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=25.6
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 029968 14 ENAEQIDSELVLSIEKLQEIQDELEKINEEAS 45 (184)
Q Consensus 14 e~~~~~~~~~~~~i~~L~~lQ~e~~~l~~e~~ 45 (184)
|-...+...++++++.+.-+|.+++.|..+-.
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieELKekN~ 37 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEELKEKNN 37 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778899999999999999998877643
No 11
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=40.74 E-value=76 Score=22.64 Aligned_cols=41 Identities=20% Similarity=0.290 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhh
Q 029968 30 LQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII 70 (184)
Q Consensus 30 L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI 70 (184)
..+|.+|++++..+++..+.+++..|..+.+-+=..++.++
T Consensus 63 kse~e~E~ae~k~KYD~~lqe~ese~~~kkK~le~~~~kV~ 103 (115)
T 3vem_A 63 KAELERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKNLVI 103 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577778888888888888888888777666655555443
No 12
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=39.81 E-value=39 Score=21.37 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Q 029968 19 IDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVY 63 (184)
Q Consensus 19 ~~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply 63 (184)
++.+...+|..|+..++. ..|..+-..|..+|.++|...++.-+
T Consensus 2 m~~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~fR~~~ 45 (60)
T 3bhp_A 2 ISNAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGFRSSM 45 (60)
T ss_dssp CCHHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 346678899999998887 55555656677888888877665443
No 13
>2fzt_A Hypothetical protein TM0693; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.05A {Thermotoga maritima} SCOP: a.46.3.1 PDB: 2g42_A
Probab=39.47 E-value=28 Score=23.08 Aligned_cols=25 Identities=20% Similarity=0.494 Sum_probs=19.0
Q ss_pred HHHHHHHhhhhhHHhhhhhhccCcc
Q 029968 51 VEQKYSEIRKPVYDKRNDIIKSIPD 75 (184)
Q Consensus 51 le~k~~~~~~Ply~~R~~iI~~Ip~ 75 (184)
++..-.....-++++|..+++++|.
T Consensus 15 IE~edyE~L~~LL~kREkLlk~L~~ 39 (79)
T 2fzt_A 15 IEKEDYETLLSLLNKRKELMEGLPK 39 (79)
T ss_dssp HHHTCHHHHHHHHHHHHHHHTTSCH
T ss_pred HHHhhHHHHHHHHHHHHHHHhhCcH
Confidence 5555556677889999999998874
No 14
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=36.73 E-value=62 Score=30.67 Aligned_cols=45 Identities=24% Similarity=0.468 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhcc
Q 029968 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (184)
Q Consensus 28 ~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~ 72 (184)
.+++..|++.+..+-+..+.+++...--+.+++-+|.+|++++.+
T Consensus 621 ~~ie~AQkkvE~~nf~~Rk~ll~yDdv~n~QR~~iY~~R~~iL~~ 665 (822)
T 3jux_A 621 KLIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQILLE 665 (822)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356778999999998888989988888899999999999999975
No 15
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=33.30 E-value=58 Score=22.19 Aligned_cols=30 Identities=17% Similarity=0.377 Sum_probs=24.1
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 029968 14 ENAEQIDSELVLSIEKLQEIQDELEKINEE 43 (184)
Q Consensus 14 e~~~~~~~~~~~~i~~L~~lQ~e~~~l~~e 43 (184)
+++..+|.+++..+..+.++..+...+..+
T Consensus 11 d~ie~LP~El~r~~~~irelD~~~~~~~~~ 40 (104)
T 4afl_A 11 DSIENLPFELQRNFQLMRDLDQRTEDLKAE 40 (104)
T ss_dssp HSGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999999998887777766544
No 16
>2jvd_A UPF0291 protein YNZC; solution structure, construct optimization, cytoplasm, structural genomics, unknown function, PSI-2; NMR {Bacillus subtilis}
Probab=32.66 E-value=47 Score=20.57 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 029968 20 DSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRK 60 (184)
Q Consensus 20 ~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~ 60 (184)
+.+...+|..|...++. ..|..+-..|..+|.+.|...++
T Consensus 3 ~~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~fR 42 (54)
T 2jvd_A 3 SNAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGFR 42 (54)
T ss_dssp CHHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 45667889999988886 55555556677778888876554
No 17
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=31.93 E-value=84 Score=30.20 Aligned_cols=45 Identities=24% Similarity=0.447 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhcc
Q 029968 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (184)
Q Consensus 28 ~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~ 72 (184)
.+++..|+..+..+-+..+.+++...--+.+++-+|++|++++.+
T Consensus 651 ~~ie~aQkkvE~~nf~iRk~ll~yDdv~n~QR~~iY~~R~~iL~~ 695 (922)
T 1nkt_A 651 RAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 695 (922)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 456678999999998888888888888889999999999999964
No 18
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=31.60 E-value=82 Score=29.98 Aligned_cols=45 Identities=20% Similarity=0.454 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhcc
Q 029968 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (184)
Q Consensus 28 ~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~ 72 (184)
.+++..|...+..+-+..+.+++...--+.+++-+|++|++++.+
T Consensus 617 ~~i~~aq~~ve~~~~~~Rk~ll~yddv~n~QR~~iy~~R~~~l~~ 661 (853)
T 2fsf_A 617 KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDV 661 (853)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 456667888888888888888888888888999999999999964
No 19
>2ipc_A Preprotein translocase SECA subunit; nucleotide binding fold, ATPase, parallel dimer; 2.80A {Thermus thermophilus}
Probab=30.26 E-value=93 Score=30.14 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhcc
Q 029968 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (184)
Q Consensus 28 ~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~~ 72 (184)
.+++..|++.+..+-+..+.+++...--+.+++-+|++|+.++.+
T Consensus 732 ~~ie~AQkkvE~~nf~iRK~ll~yDdV~n~QR~~IY~~R~~iL~~ 776 (997)
T 2ipc_A 732 RSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLG 776 (997)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456678999999998888888888888889999999999999976
No 20
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=28.69 E-value=1e+02 Score=29.25 Aligned_cols=43 Identities=19% Similarity=0.386 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhc
Q 029968 29 KLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIK 71 (184)
Q Consensus 29 ~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~Ply~~R~~iI~ 71 (184)
++...|..++..+-+..+.+++...--+.+++-+|.+|+.++.
T Consensus 580 ~i~~aq~~ve~~~~~~rk~ll~yddv~~~QR~~iy~~R~~~l~ 622 (844)
T 1tf5_A 580 AVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVID 622 (844)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5667788888888888888888888888899999999999884
No 21
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=27.79 E-value=2.1e+02 Score=22.55 Aligned_cols=18 Identities=11% Similarity=0.471 Sum_probs=14.0
Q ss_pred hhhhhHHhhhhhhccCcc
Q 029968 58 IRKPVYDKRNDIIKSIPD 75 (184)
Q Consensus 58 ~~~Ply~~R~~iI~~Ip~ 75 (184)
...-+..+|.++..+||.
T Consensus 158 e~~~l~~~r~~l~~~i~~ 175 (256)
T 3na7_A 158 TQQIIFKKKEDLVEKTEP 175 (256)
T ss_dssp HHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHHhcCCH
Confidence 345678899999999884
No 22
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=26.37 E-value=1.7e+02 Score=20.44 Aligned_cols=13 Identities=15% Similarity=0.452 Sum_probs=8.2
Q ss_pred hhhhHHhhhhhhc
Q 029968 59 RKPVYDKRNDIIK 71 (184)
Q Consensus 59 ~~Ply~~R~~iI~ 71 (184)
.+.-..+|+++|.
T Consensus 77 lk~~L~qRD~LI~ 89 (103)
T 4h22_A 77 VKEALKQREEMLE 89 (103)
T ss_dssp HHHHHHTTTSCC-
T ss_pred HHHHHHHHHHHHH
Confidence 4556677777775
No 23
>2hep_A UPF0291 protein YNZC; SR384, structure, autostructure, northeast structural genomics consortium, PSI-1, protein structure initiative, NESG; NMR {Bacillus subtilis} SCOP: a.2.21.1
Probab=24.36 E-value=79 Score=21.36 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 029968 20 DSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKP 61 (184)
Q Consensus 20 ~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~le~k~~~~~~P 61 (184)
+.+...+|..|+..++. ..|..+-..|..+|+++|...++-
T Consensus 3 ~~~~i~RINeLakK~K~-~GLT~eEk~EQ~~LR~eYl~~fR~ 43 (85)
T 2hep_A 3 SNAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGFRS 43 (85)
T ss_dssp CSHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCC-
T ss_pred cHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999998887 555555566677777777665543
No 24
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=22.57 E-value=1.9e+02 Score=19.75 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=22.1
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 029968 14 ENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLE 50 (184)
Q Consensus 14 e~~~~~~~~~~~~i~~L~~lQ~e~~~l~~e~~~e~~~ 50 (184)
+...++|++.+. +.||.+++.++.+.+++..+
T Consensus 6 ~d~s~LPpeqRk-----kkL~~Ki~el~~ei~ke~~~ 37 (98)
T 2ke4_A 6 EDFSHLPPEQQR-----KRLQQQLEERSRELQKEVDQ 37 (98)
T ss_dssp SCSSSSCHHHHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 345679998853 44678888888777666555
Done!