BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029969
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q60352|Y044_METJA Uncharacterized protein MJ0044 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0044 PE=1 SV=1
Length = 260
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 33/170 (19%)
Query: 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLT 72
G+ + D S + + +K VPV+HGD V+DD G I+SGD I+ +LA +K D +++ T
Sbjct: 120 GDKLIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYAT 179
Query: 73 DVLGVY--SHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVT 130
DV GV + P + + +I GS SI D TGGM
Sbjct: 180 DVDGVLIDNKPIKRIDKNNIYKILNYLSGSNSI-------------------DVTGGMKY 220
Query: 131 KISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGTVIHFS 179
KI MI K ++ ++++ KAL GE+ GT I FS
Sbjct: 221 KID---MIRKNKCRGFVFNGNKANNIYKALLGEVE--------GTEIDFS 259
>sp|A1KTV5|PROB_NEIMF Glutamate 5-kinase OS=Neisseria meningitidis serogroup C / serotype
2a (strain ATCC 700532 / FAM18) GN=proB PE=3 SV=1
Length = 369
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 30/145 (20%)
Query: 8 WSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDY 67
+ +GG L V ++ VP+++ + + V+ I D + +AA ++ D
Sbjct: 113 YQNAGGALSV--------LLQRRAVPIINENDTVS-VEELKIGDNDTLSAQVAAMIQADL 163
Query: 68 VVFLTDVLGVYS-HPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA----AH 122
+V LTD+ G+Y+ +P + P+AV L +I +H+N+++ I +A +
Sbjct: 164 LVLLTDIDGLYTGNPNSNPDAVRLDKI---------------EHINHEI-IEMAGGSGSA 207
Query: 123 DTTGGMVTKISEAAMIAKLGIDVYI 147
+ TGGM+TKI A + A+ G+ VYI
Sbjct: 208 NGTGGMLTKIKAATIAAESGVPVYI 232
>sp|Q9JZG2|PROB_NEIMB Glutamate 5-kinase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=proB PE=3 SV=1
Length = 369
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 30/145 (20%)
Query: 8 WSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDY 67
+ +GG L V ++ VP+++ + + V+ I D + +AA ++ D
Sbjct: 113 YQNAGGALSV--------LLQRRAVPIINENDTVS-VEELKIGDNDTLSAQVAAMIQADL 163
Query: 68 VVFLTDVLGVYS-HPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA----AH 122
+V LTD+ G+Y+ +P + P+AV L +I +H+N+++ I +A +
Sbjct: 164 LVLLTDIDGLYTGNPNSNPDAVRLDKI---------------EHINHEI-IEMAGGSGSA 207
Query: 123 DTTGGMVTKISEAAMIAKLGIDVYI 147
+ TGGM+TKI A + A+ G+ VYI
Sbjct: 208 NGTGGMLTKIKAATIAAESGVPVYI 232
>sp|Q97R95|PROB_STRPN Glutamate 5-kinase OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=proB PE=3 SV=1
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|C1CDS8|PROB_STRZJ Glutamate 5-kinase OS=Streptococcus pneumoniae (strain JJA) GN=proB
PE=3 SV=1
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|C1CRW2|PROB_STRZT Glutamate 5-kinase OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=proB PE=3 SV=1
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|C1CK17|PROB_STRZP Glutamate 5-kinase OS=Streptococcus pneumoniae (strain P1031)
GN=proB PE=3 SV=1
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|C1C6R3|PROB_STRP7 Glutamate 5-kinase OS=Streptococcus pneumoniae (strain 70585)
GN=proB PE=3 SV=1
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|Q8DQ61|PROB_STRR6 Glutamate 5-kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=proB PE=3 SV=2
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|Q04KZ3|PROB_STRP2 Glutamate 5-kinase OS=Streptococcus pneumoniae serotype 2 (strain
D39 / NCTC 7466) GN=proB PE=3 SV=1
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|B5YDE1|PROB_DICT6 Glutamate 5-kinase OS=Dictyoglomus thermophilum (strain ATCC 35947
/ DSM 3960 / H-6-12) GN=proB PE=3 SV=1
Length = 371
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 27 IKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPT-EP 85
I+ VP+++ + + V+ I D + +A + D +V L+DV G+YS P P
Sbjct: 125 IEEKVVPIVNENDTVA-VEEIKIGDNDTLSAKVACAINADLLVILSDVEGLYSEDPNLSP 183
Query: 86 NAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDV 145
NAVL+R+I ++ ++E TGGM TK+ A ++ + GI +
Sbjct: 184 NAVLIRDIY---------------EIDEKIEKIAGPGKGTGGMYTKVQAAKIVTEAGIPM 228
Query: 146 YIVKA 150
+ KA
Sbjct: 229 ILAKA 233
>sp|Q9JUK7|PROB_NEIMA Glutamate 5-kinase OS=Neisseria meningitidis serogroup A / serotype
4A (strain Z2491) GN=proB PE=3 SV=1
Length = 369
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 30/145 (20%)
Query: 8 WSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDY 67
+ +GG L V ++ VP+++ + + V+ I D + +AA ++ D
Sbjct: 113 YQNAGGALSV--------LLQRRAVPIINENDTVS-VEELKIGDNDTLSAQVAAMIQADL 163
Query: 68 VVFLTDVLGVYS-HPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA----AH 122
+V LTD+ G+Y+ +P + P+AV L +I +H+N+++ I +A +
Sbjct: 164 LVLLTDIDGLYTGNPNSNPDAVRLDKI---------------EHINHEI-IEMAGGSGSA 207
Query: 123 DTTGGMVTKISEAAMIAKLGIDVYI 147
+ TGGM+TKI A + + G+ VYI
Sbjct: 208 NGTGGMLTKIKAATIATESGVPVYI 232
>sp|B8ZP34|PROB_STRPJ Glutamate 5-kinase OS=Streptococcus pneumoniae (strain ATCC 700669
/ Spain 23F-1) GN=proB PE=3 SV=1
Length = 369
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 26/137 (18%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+++ + D + +AA ++ D +VFLTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDELK---VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA----AHDTTGGMVTKISEAAMIA 139
+P A L I + +N ++ I +A + + TGGM+TKI A +
Sbjct: 181 DPRAKRLERI---------------ETINCEI-IDMAGGAGSSNGTGGMLTKIKAATIAT 224
Query: 140 KLGIDVYIVKAASSHSV 156
+ G+ VYI + S S+
Sbjct: 225 ESGVPVYICSSLKSDSM 241
>sp|B1IB99|PROB_STRPI Glutamate 5-kinase OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=proB PE=3 SV=1
Length = 369
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 27 IKSGFVPVLHGD--AVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPT 83
+ G +P+++ + V+D+V+ + D + +AA ++ D +V LTDV G+Y+ +P +
Sbjct: 124 LNRGAIPIINENDSVVIDEVK---VGDNDTLSAQVAAMVQADLLVLLTDVDGLYTGNPNS 180
Query: 84 EPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
+P A L I +I + + + + TGGM+TKI A + + G+
Sbjct: 181 DPRAKRLERIE-------TINREIIDMAGG-----AGSSNGTGGMLTKIKAATIATESGV 228
Query: 144 DVYIVKAASSHSV 156
VYI + S S+
Sbjct: 229 PVYICSSLKSDSM 241
>sp|B4RLE8|PROB_NEIG2 Glutamate 5-kinase OS=Neisseria gonorrhoeae (strain NCCP11945)
GN=proB PE=3 SV=1
Length = 295
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 30/145 (20%)
Query: 8 WSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDY 67
+ +GG L V ++ +P+++ + + V+ I D + +AA ++ D
Sbjct: 113 YQNAGGALSV--------LLQRRAIPIINENDTVS-VEELKIGDNDTLSAQVAAMIQADL 163
Query: 68 VVFLTDVLGVYS-HPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA----AH 122
+V LTD+ +Y+ +P + P+AV L +I +H+N+++ I +A +
Sbjct: 164 LVLLTDIDDLYTGNPNSNPDAVRLDKI---------------EHINHEI-IKMAGGSGSA 207
Query: 123 DTTGGMVTKISEAAMIAKLGIDVYI 147
+ TGGM+TKI A + A+ G+ VYI
Sbjct: 208 NGTGGMLTKIKAATIAAESGVPVYI 232
>sp|Q2IMF3|PROB_ANADE Glutamate 5-kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
GN=proB PE=3 SV=1
Length = 379
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 25 KTIKSGFVPVLH-GDAV-LDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP 82
+ + +G VPV++ D V +D+++ + D + +A ++ D V LTDV G+Y P
Sbjct: 130 RLLDAGAVPVVNENDTVAVDELK---VGDNDTLAALVAGCVEADAVAMLTDVDGLYDRNP 186
Query: 83 TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLG 142
EP A LLR++ P + + + + GGM+TK+ A + G
Sbjct: 187 AEPGARLLRDV------------PRVTAEIERSAGGAGSERSVGGMITKVKAARRLGAQG 234
Query: 143 IDVYIVKAASSHSVKA-LSGE 162
+ ++ + ++ A L+GE
Sbjct: 235 VVTALLSGRRARALPALLAGE 255
>sp|B8DVU2|PROB_BIFA0 Glutamate 5-kinase OS=Bifidobacterium animalis subsp. lactis
(strain AD011) GN=proB PE=3 SV=1
Length = 377
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 23 VAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP 82
+AK ++ G VP+++ + L + D + +A ++ D ++ LTDV +Y+ PP
Sbjct: 133 MAKLLELGVVPIVNENDALASNE-IRFGDNDRLSALIANMVRADALILLTDVDALYTAPP 191
Query: 83 TEPNAVLLREIAVGEDGSWSIT-KPTLQHMNNQVEITVAAHDT-TGGMVTKISEAAMIAK 140
+EP GS I P + + +QV + + TGGMVTK+ A M A
Sbjct: 192 SEP-------------GSHRIGFVPNITELLDQVRVGGSESGVGTGGMVTKLEAARMAAV 238
Query: 141 LGIDVYIVKAASS 153
GI + A ++
Sbjct: 239 SGIPAVLTAARNA 251
>sp|A3CMT0|PROB_STRSV Glutamate 5-kinase OS=Streptococcus sanguinis (strain SK36) GN=proB
PE=3 SV=1
Length = 369
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 27 IKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPTEP 85
+ G +P+++ + + ++ + D + +AA ++ D +V LTDV G+Y+ +P T P
Sbjct: 124 LNRGAIPIINENDTVA-IEELKVGDNDTLSAQVAAMVQADLLVLLTDVDGLYTANPSTNP 182
Query: 86 NAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDV 145
+A L +I I+ + + TGGM+TKI A + G+ V
Sbjct: 183 DARRLEKIE-------KISSELIDMAGG-----AGTSNGTGGMLTKIKAATLATMSGVPV 230
Query: 146 YIVKAASSHSV 156
YI + S ++
Sbjct: 231 YICSSLKSDAL 241
>sp|A8AX76|PROB_STRGC Glutamate 5-kinase OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=proB PE=3 SV=1
Length = 369
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 24/127 (18%)
Query: 27 IKSGFVPVLH-GDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPTE 84
+ G +PV++ D+V ++ + D + +AA ++ D +V LTDV G+Y+ +P T
Sbjct: 124 LNRGAIPVINENDSVA--IEELKVGDNDTLSAQVAAMVQADLLVLLTDVDGLYTANPSTN 181
Query: 85 PNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAA----HDTTGGMVTKISEAAMIAK 140
P+A L +I + +++++ I +A + TGGM+TKI A +
Sbjct: 182 PDARRLEKI---------------EKISSEL-IDIAGGAGTSNGTGGMLTKIKAATLATM 225
Query: 141 LGIDVYI 147
G+ VYI
Sbjct: 226 SGVPVYI 232
>sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp.
japonica GN=P5CS PE=2 SV=2
Length = 716
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 26/122 (21%)
Query: 59 LAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEIT 118
LA +K D ++ L+DV G+YS PP+EP++ ++ T +Q EIT
Sbjct: 183 LALELKADLLILLSDVDGLYSGPPSEPSSKIIH---------------TYIKEKHQQEIT 227
Query: 119 VAAHDTT--GGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGTV 175
GGM K+ A + + G V I + S+ K L GE +GT+
Sbjct: 228 FGDKSRVGRGGMTAKVKAAVLASNSGTPVVITSGFENRSILKVLHGE--------KIGTL 279
Query: 176 IH 177
H
Sbjct: 280 FH 281
>sp|Q97E63|PROB_CLOAB Glutamate 5-kinase OS=Clostridium acetobutylicum (strain ATCC 824 /
DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=proB PE=3
SV=1
Length = 267
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 30 GFVPVLH-GDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVY-SHPPTEPNA 87
G +P+++ DA + V+ D + +A+ +K D ++ L+D+ G+Y S+P NA
Sbjct: 135 GIIPIVNENDATV--VEEIKFGDNDTLSARVASLIKADLLILLSDIDGLYDSNPAVNKNA 192
Query: 88 VLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT---TGGMVTKISEAAMIAKLGID 144
VL+ T+ +N +V+ + + TGGM TKI A + + GI
Sbjct: 193 VLI---------------DTVNEVNEEVKASAGGAGSKLGTGGMATKIRAAEIATENGIS 237
Query: 145 VYIVKAASSHSVKAL 159
+ I +++ +
Sbjct: 238 MVIANGEKQEAIRNI 252
>sp|Q8THJ9|ARGB_METAC Acetylglutamate kinase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=argB PE=3 SV=1
Length = 299
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 32/174 (18%)
Query: 6 CGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAI-LSGDVIIRHLAAYMK 64
GW G V + ++ ++ ++PV+ AV D +G A+ ++ D + +AA +K
Sbjct: 149 IGWV---GESEVINPEILHIMLEKSYIPVISPIAV--DAKGNALNINADTVAGDIAAALK 203
Query: 65 PDYVVFLTDVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT 124
++ +TDV G LLR I +D S I++ L +++ +E +
Sbjct: 204 AKKLILMTDVSG------------LLRNI---KDPSSRISRVNLDQIDSLIEEGI----I 244
Query: 125 TGGMVTKISEAAMIAKLGID-VYIVKAASSHSVKALSGELREKIPDDWLGTVIH 177
+GGM+ KI AA+ K G++ +++ + SHS+ L E D +GT+++
Sbjct: 245 SGGMIPKIKGAAVAVKSGVERAHVINGSVSHSM------LLELFTDGGVGTMLY 292
>sp|Q8A1E7|PROB_BACTN Glutamate 5-kinase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=proB
PE=3 SV=1
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 27 IKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPN 86
+++G +P+++ + + V D + +A+ M ++ L+++ G+Y+ P++P
Sbjct: 126 LENGVIPIVNENDTIS-VSELMFTDNDELSGLIASMMDAQALIILSNIDGIYNGSPSDPA 184
Query: 87 AVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVY 146
+ ++REI G+D ++N ++ T ++ GGM+TK + A +A GI V
Sbjct: 185 SAVIREIEHGKD------------LSNYIQATKSSF-GRGGMLTKTNIARKVADEGITVI 231
Query: 147 I 147
I
Sbjct: 232 I 232
>sp|Q46D93|ARGB_METBF Acetylglutamate kinase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=argB PE=3 SV=1
Length = 322
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 32/178 (17%)
Query: 2 SPFSCGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAI-LSGDVIIRHLA 60
+ GW G V + ++ +++G++PV+ AV D +G A+ ++ D++ +A
Sbjct: 168 TEVDIGWV---GECEVINPDILHIVLENGYIPVISPIAV--DAKGNALNINADIVAGDIA 222
Query: 61 AYMKPDYVVFLTDVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA 120
A + ++ +TDV G LLR++ D + I++ TL+ +++ +A
Sbjct: 223 AALHAKKLILMTDVSG------------LLRDM---NDPNSHISRVTLEDIDH----LIA 263
Query: 121 AHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSVKALSGELREKIPDDWLGTVIH 177
GGM+ K+ AA+ K G++ +I+ + SHS+ L E D +GT+++
Sbjct: 264 EGVIQGGMIPKLKGAAVAVKNGVEKAHIINGSVSHSM------LLELFTDRGIGTMVY 315
>sp|Q989S7|PROB2_RHILO Glutamate 5-kinase 2 OS=Rhizobium loti (strain MAFF303099) GN=proB2
PE=3 SV=1
Length = 284
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSH 80
S + + G VPV++ + + C + D + +A K D ++ L+DV G+++
Sbjct: 136 SAFQQLLNVGAVPVINENDATATPEVC-LGDNDRLAARVAQIAKADLLILLSDVDGLFTE 194
Query: 81 PPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA---AHDTTGGMVTKISEAAM 137
P D + P ++ + ++EI + A +GGMVTK+ A +
Sbjct: 195 DP--------------HDNPLARMIPEVRRITPEIEIMASLSPARHGSGGMVTKLMAARI 240
Query: 138 IAKLGIDVYIVKAASSHSVKAL 159
+ G +V I K + S+ + A+
Sbjct: 241 AMEAGCNVVIAKGSKSYPLAAI 262
>sp|Q4FP45|PROB_PELUB Glutamate 5-kinase OS=Pelagibacter ubique (strain HTCC1062) GN=proB
PE=3 SV=1
Length = 368
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 28 KSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVYSH-PPTE 84
K GFVP+++ + D + I GD + +A D ++ L+DV G+Y+H P
Sbjct: 128 KLGFVPIVNEN---DTIATSEIKYGDNDRLASRVAQISGADSLILLSDVDGLYTHNPKIY 184
Query: 85 PNAVLLREIA-VGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI 143
NA L++EI + +D TK +H TGGM TKI A + G
Sbjct: 185 KNAKLIKEIRNIDKDIEKIATKSISEH-------------GTGGMKTKIDAAKICQLSGC 231
Query: 144 DVYIVKAASSHSVKALSGE 162
+ I + +K ++ E
Sbjct: 232 QMVIANGLVNRPIKKITEE 250
>sp|C3M9Y0|PROB_RHISN Glutamate 5-kinase OS=Rhizobium sp. (strain NGR234) GN=proB PE=3
SV=1
Length = 393
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + +K G VP+++ + D V I GD + +A + D +V L+D+ G+Y
Sbjct: 126 ATINQLLKLGSVPIINEN---DTVATTEIRYGDNDRLAARVATMVGADLLVLLSDIDGLY 182
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM 137
+ PP +P A L IA IT P ++ M A+ + GGM TKI +
Sbjct: 183 TAPPHLDPQARFLETIA-------EIT-PEIEAMAG----GAASELSRGGMRTKIDAGKI 230
Query: 138 IAKLGIDVYIVKAASSHSVKALSGELR 164
G + I H +KA+ R
Sbjct: 231 ATTAGCAMIIASGKPEHPLKAIEAGAR 257
>sp|Q92LB3|PROB1_RHIME Glutamate 5-kinase 1 OS=Rhizobium meliloti (strain 1021) GN=proB1
PE=3 SV=1
Length = 393
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + +K G VP+++ + D V I GD + +A + D +V L+D+ G+Y
Sbjct: 126 ATIGQLLKLGSVPIINEN---DTVATTEIRYGDNDRLAARVATMVGADLLVLLSDIDGLY 182
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM 137
+ PP +PNA L +A IT P ++ M A+ + GGM TKI +
Sbjct: 183 TAPPHLDPNARFLETVA-------EIT-PEIEAMAGG----AASELSRGGMRTKIDAGKI 230
Query: 138 IAKLGIDVYIVKAASSHSVKALSGELR 164
G + I H + A+ R
Sbjct: 231 ATTAGCAMIIASGKPDHPLAAIEAGAR 257
>sp|Q9KCR4|PROB_BACHD Glutamate 5-kinase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=proB PE=3
SV=1
Length = 374
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILS---GDVIIRHLAAYMKPDYVVFLTDVLGV 77
S + + +K G +P+++ + D A L+ D++ ++ + + LTDV G+
Sbjct: 118 SALMELLKRGALPIINEN----DSTSIAELTFGDNDMLSALVSGLIHAHTLCILTDVNGL 173
Query: 78 Y-SHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAA 136
Y ++P T PNA + + PT+ Q+ ++ TGGM +K++ A
Sbjct: 174 YDANPKTHPNAKRYQYL------------PTIPDEMLQMGGEAGSNVGTGGMKSKVAAAQ 221
Query: 137 MIAKLGIDVYIVKAASSHSV 156
LG+DV+I KA+ H++
Sbjct: 222 TALSLGVDVFIGKASGEHAL 241
>sp|Q6NDE5|PROB_RHOPA Glutamate 5-kinase OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=proB PE=3 SV=1
Length = 376
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 24/146 (16%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S +AK ++ VPV++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 STIAKLLEWRAVPVINEN---DTVATTEIRYGDNDRLAARVATMASADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT---TGGMVTKISE 134
+ PP + P+A L+ P ++ + ++E A + GGM TKI
Sbjct: 182 TAPPGSNPDATLI---------------PVVEAITAEIEGMAGAAGSELSRGGMRTKIEA 226
Query: 135 AAMIAKLGIDVYIVKAASSHSVKALS 160
A + G + I H +KA++
Sbjct: 227 AKIATSAGTHMLIASGKIDHPLKAIA 252
>sp|Q2J3J7|PROB_RHOP2 Glutamate 5-kinase OS=Rhodopseudomonas palustris (strain HaA2)
GN=proB PE=3 SV=1
Length = 376
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S +AK ++ VPV++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 STIAKLLEWRAVPVINEN---DTVATNEIRYGDNDRLAARVATMASADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT---TGGMVTKISE 134
+ PP + P+A L+ P + + ++E A + GGM TKI
Sbjct: 182 TAPPGSNPDAKLI---------------PVVDSVTAEIEGMAGAAGSELSRGGMRTKIEA 226
Query: 135 AAMIAKLGIDVYIVKAASSHSVKALSG 161
A + G + I H +KA++G
Sbjct: 227 AKIATSAGTHMLIASGKIDHPLKAIAG 253
>sp|B8D1G8|ARGB_HALOH Acetylglutamate kinase OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=argB PE=3 SV=1
Length = 290
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 31/171 (18%)
Query: 13 GNLPVADLSVVAKTIKSGFVPVLH--GDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVF 70
G++ + +V IK G++PV+ G + D ++ D + LA +K + ++F
Sbjct: 148 GSVKKINPEIVLNLIKGGYIPVISPVGSSKEGDTYN---INADTVAGKLAVSLKAEKLIF 204
Query: 71 LTDVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVT 130
LTDV GV+S P E V + V E SW + GGMV
Sbjct: 205 LTDVDGVWSDPSNEKTRV--SSLTVNEVKSW-----------------IGEGKIKGGMVP 245
Query: 131 KISEAAMIAKLGID-VYIVKAASSHSVKALSGELREKIPDDWLGTVIHFSR 180
K+ G++ +I+ H++ L E D +GT+I R
Sbjct: 246 KVEACIEAVTCGVNRTHILNGLIPHAL------LLEIFTDRGIGTMILKER 290
>sp|A5E964|PROB_BRASB Glutamate 5-kinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=proB PE=3 SV=1
Length = 378
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 25/128 (19%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S +AK + VPV++ + D V I GD + +A D +V L+D+ G+Y
Sbjct: 125 STIAKLLDWRAVPVINEN---DTVATAEIRYGDNDRLAARVATMASADLLVLLSDIDGLY 181
Query: 79 SHPPTE-PNAVLLREIAVGEDGSWSITKPTLQHMNNQVEI---TVAAHDTTGGMVTKISE 134
+ PP + PNA L+ P ++ + +E + A+ + GGM TKI E
Sbjct: 182 TAPPAQDPNARLI---------------PVVESITADIEAMAGSAASEFSRGGMRTKI-E 225
Query: 135 AAMIAKLG 142
AA IA G
Sbjct: 226 AAKIATTG 233
>sp|A6UDV7|PROB_SINMW Glutamate 5-kinase OS=Sinorhizobium medicae (strain WSM419) GN=proB
PE=3 SV=1
Length = 393
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + ++ G VP+++ + D V I GD + +A + D +V L+D+ G+Y
Sbjct: 126 ATIGQLLRLGSVPIINEN---DTVATTEIRYGDNDRLAARVATMVGADLLVLLSDIDGLY 182
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM 137
+ PP +PNA LL +A IT P ++ M A+ + GGM TKI +
Sbjct: 183 TAPPHLDPNARLLETVA-------EIT-PDIEAMAG----GAASELSRGGMRTKIDAGKI 230
Query: 138 IAKLGIDVYIVKAASSHSVKAL 159
G + I H + A+
Sbjct: 231 ATTAGCAMIIASGKPEHPLAAV 252
>sp|B3Q732|PROB_RHOPT Glutamate 5-kinase OS=Rhodopseudomonas palustris (strain TIE-1)
GN=proB PE=3 SV=1
Length = 376
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 24/146 (16%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S +AK ++ VPV++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 STIAKLLEWRAVPVINEN---DTVATTEIRYGDNDRLAARVATMASADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHD---TTGGMVTKISE 134
+ PP +P+A L+ P ++ + ++E A + GGM TKI
Sbjct: 182 TAPPGNDPDATLI---------------PVVEAITAEIEGMAGAAGSELSRGGMRTKIEA 226
Query: 135 AAMIAKLGIDVYIVKAASSHSVKALS 160
A + G + I H ++A++
Sbjct: 227 AKIATSAGTHMLIASGKIDHPLRAIA 252
>sp|Q13DM7|PROB_RHOPS Glutamate 5-kinase OS=Rhodopseudomonas palustris (strain BisB5)
GN=proB PE=3 SV=1
Length = 376
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 24/146 (16%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S +AK ++ VPV++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 STIAKLLEWRAVPVINEN---DTVATNEIRYGDNDRLAARVATMASADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT---TGGMVTKISE 134
+ PP + P+A L+ P ++ + ++E A + GGM TKI
Sbjct: 182 TAPPGSNPDAKLI---------------PEVESVTAEIESMAGAAGSELSRGGMRTKIEA 226
Query: 135 AAMIAKLGIDVYIVKAASSHSVKALS 160
A + G + I H +KA++
Sbjct: 227 AKIATSAGTHMLIASGKIDHPLKAIA 252
>sp|Q8PXJ8|ARGB_METMA Acetylglutamate kinase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=argB
PE=3 SV=1
Length = 292
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 32/178 (17%)
Query: 2 SPFSCGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAI-LSGDVIIRHLA 60
+ GW G V + ++ ++ G++PV+ AV D +G A+ ++ D + +A
Sbjct: 145 TEVDIGWV---GESEVINPEILHIMLEKGYIPVISPIAV--DAKGNALNINADTVAGDIA 199
Query: 61 AYMKPDYVVFLTDVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVA 120
A + ++ +TDV G LLR I +D I++ L ++ +E V
Sbjct: 200 AALHAKKLILMTDVSG------------LLRNI---KDPGSRISRVKLDDIDLLIEEGV- 243
Query: 121 AHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSVKALSGELREKIPDDWLGTVIH 177
+GGM+ KI AA+ K G++ +I+ + SHS+ L E D +GT+I+
Sbjct: 244 ---ISGGMIPKIKGAAVAVKSGVERAHIINGSVSHSM------LLELFTDGGVGTMIY 292
>sp|Q07U76|PROB_RHOP5 Glutamate 5-kinase OS=Rhodopseudomonas palustris (strain BisA53)
GN=proB PE=3 SV=1
Length = 377
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 24/146 (16%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S +AK ++ VPV++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 STIAKLLEWRAVPVINEN---DTVATAEIRYGDNDRLAARVATMASADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHD---TTGGMVTKISE 134
+ PP P+A L+ P ++ ++ ++E + + GGM TKI
Sbjct: 182 TAPPVANPDAELI---------------PVVESVSAEIEAMAGGAESELSRGGMYTKIEA 226
Query: 135 AAMIAKLGIDVYIVKAASSHSVKALS 160
A + G + I H ++A++
Sbjct: 227 AKIATTAGTHMLIANGKIEHPLQAIA 252
>sp|Q1MA75|PROB_RHIL3 Glutamate 5-kinase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=proB PE=3 SV=2
Length = 389
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + +K G VP+++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 ATINQLLKIGAVPIINEN---DTVATSEIRYGDNDRLAARVATMTGADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM 137
+ PP +PNA L IA IT P ++ M A+ + GGM TKI +
Sbjct: 182 TAPPHLDPNATFLETIA-------EIT-PEIEAMAG----GAASELSRGGMRTKIDAGKI 229
Query: 138 IAKLGIDVYIVKAASSHSVKALSGELR 164
G + I + + + A+ R
Sbjct: 230 ATASGCAMIIASGKTENPLSAIENGAR 256
>sp|Q3AF41|PROB_CARHZ Glutamate 5-kinase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=proB PE=3 SV=1
Length = 372
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
Query: 27 IKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTE-P 85
+ G VPV++ + + V+ D + +A ++ D +V L+D+ G+Y+ P +
Sbjct: 130 LNYGVVPVVNENDTVA-VEEIRFGDNDTLSARVAVLVEADLLVLLSDIDGLYTADPRKNS 188
Query: 86 NAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT---TGGMVTKISEAAMIAKLG 142
NA L P + +N ++E T TGGM TKI A + G
Sbjct: 189 NARFL---------------PEVLEINEEIEQLAGGSGTAVGTGGMETKIEAAKIAVNAG 233
Query: 143 IDVYIVKAASSHSVKALSGE 162
I + I +A + + L GE
Sbjct: 234 IPMVIARADYGNLRRILRGE 253
>sp|Q188A2|ARGB_CLOD6 Acetylglutamate kinase OS=Clostridium difficile (strain 630)
GN=argB PE=3 SV=1
Length = 286
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLT 72
G + ++ ++ +KSG++ V+ V DD + I +GD +A + D ++ LT
Sbjct: 143 GEIKKVNVELIESCLKSGYISVIATIGVGDDGETYNI-NGDTAASAIAKELNADKLILLT 201
Query: 73 DVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKI 132
DV G+ P E + IT+ L+ ++ E + TGGM+ KI
Sbjct: 202 DVPGLLREPDEEKSL---------------ITEVILEDVDKLFEEGI----ITGGMIPKI 242
Query: 133 SEAAMIAKLGID-VYIVKAASSHSVKALSGELREKIPDDWLGTVIHFSRE 181
G++ V+I+ HS+ + E D +GT+I E
Sbjct: 243 EGCVDALNNGVNRVHILDGRVPHSI------ITELFTDSGIGTLIRKENE 286
>sp|Q8XHA6|PROB_CLOPE Glutamate 5-kinase OS=Clostridium perfringens (strain 13 / Type A)
GN=proB PE=3 SV=1
Length = 269
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 21/143 (14%)
Query: 27 IKSGFVPVLH-GDAV-LDDVQGCAILS---GDVIIRHLAAYMKPDYVVFLTDVLGVY-SH 80
++ G +P+++ DA+ +D++Q IL+ D + ++ + D ++ L+D+ G Y S
Sbjct: 129 LEKGIIPIVNENDAISIDEIQN--ILNFGDNDNLSAIVSTLVNADTLIILSDIDGFYDSD 186
Query: 81 PPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAK 140
P T ++ +L+E+ + IT P ++ + ++ TGGMVTK+S A +
Sbjct: 187 PRTNEDSKMLKEV-------YEIT-PEIE----ECAGGAGSNRGTGGMVTKLSAAKVATS 234
Query: 141 LGIDVYIVKAASSH-SVKALSGE 162
GID+ + + + L+GE
Sbjct: 235 NGIDMILANGENPEILIDILNGE 257
>sp|Q7NPI6|PROB_GLOVI Glutamate 5-kinase OS=Gloeobacter violaceus (strain PCC 7421)
GN=proB PE=3 SV=1
Length = 369
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 53 DVIIRHLAAYMKPDYVVFLTDVLGVYS-HPPTEPNAVLLREIAVGEDGSWSITKPTLQHM 111
D + +A ++ ++V LTDV G+YS +P +P A LL E+ I++ LQ
Sbjct: 148 DALSALVAGLVEAQWLVLLTDVAGLYSANPRLDPQARLLSEVT-------EISEELLQSA 200
Query: 112 NNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGE 162
+ + +GGM +K+ A + A G+ I + + ++ + L+GE
Sbjct: 201 RGR------SLWGSGGMASKLEAARIAASAGVATVITEGNTPQNIERILAGE 246
>sp|B3PRZ4|PROB_RHIE6 Glutamate 5-kinase OS=Rhizobium etli (strain CIAT 652) GN=proB PE=3
SV=1
Length = 389
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + +K G VP+++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 125 ATINQLLKIGAVPIINEN---DTVATSEIRYGDNDRLAARVATMTGADLLILLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKI 132
+ PP +PNA L IA IT P ++ M A+ + GGM TKI
Sbjct: 182 TAPPHLDPNATFLETIA-------EIT-PDIEAMAG----GAASELSRGGMRTKI 224
>sp|Q82C83|PROB_STRAW Glutamate 5-kinase OS=Streptomyces avermitilis (strain ATCC 31267 /
DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=proB PE=3 SV=1
Length = 375
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 28/145 (19%)
Query: 25 KTIKSGFVPVLHGDAVLDDVQGCAILSGD-----VIIRHLAAYMKPDYVVFLTDVLGVYS 79
K + G +PV++ + D V I GD ++ HL ++ D +V L+DV GVY
Sbjct: 131 KLLAMGALPVVNEN---DTVATDEIRFGDNDRLAALVAHL---VRADLLVLLSDVDGVYD 184
Query: 80 HPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDT--TGGMVTKISEAAM 137
P++P + ++ +D L H VEI A TGGMVTKI A +
Sbjct: 185 GDPSKPGTSRVAQVHGPQD---------LAH----VEIGSAGRAGVGTGGMVTKIEAARI 231
Query: 138 IAKLGIDVYIVKAASSHSVKALSGE 162
A GI V + A H+ AL+G
Sbjct: 232 AAAAGIPVVLTSAV--HAADALAGR 254
>sp|Q8UBS0|PROB_AGRT5 Glutamate 5-kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC
33970) GN=proB PE=3 SV=1
Length = 389
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + +K G +P+++ + D V I GD + +A D +V L+D+ G+Y
Sbjct: 126 ATINQLLKIGAIPIINEN---DTVATTEIRYGDNDRLAARVATMTGADLLVLLSDIDGLY 182
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM 137
+ PP +P+A L IA IT P ++ M A+ + GGM TKI +
Sbjct: 183 TAPPHLDPDAKFLETIA-------DIT-PEIEAMAG----GAASELSRGGMRTKIDAGKI 230
Query: 138 IAKLGIDVYIVKAASSHSVKALSGELR 164
G + I + + +KA+ R
Sbjct: 231 ATAAGCGMIIASGKTLNPLKAIENGAR 257
>sp|Q0AUM4|ARGB_SYNWW Acetylglutamate kinase OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=argB PE=3 SV=1
Length = 287
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLT 72
G + + ++ K I++G++PV+ + +D Q I + D++ +A MK D +V LT
Sbjct: 146 GEVQYVNPELIEKVIENGYIPVIAPIGIGEDQQSYNI-NADLVAAAIAVSMKADKLVLLT 204
Query: 73 DVLGVYSHPPTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKI 132
DV G+ +P D + I+ + + N V+ + A GGMV K+
Sbjct: 205 DVPGLMMNPA---------------DSNSLISVLKVSEVENYVQEGIIA----GGMVPKV 245
Query: 133 SEAAMIAKLGI-DVYIVKAASSHSVKALSGELREKIPDDWLGTVI 176
G+ +I+ HS+ L E D+ +GT++
Sbjct: 246 QCCVEAVTGGVGRTHIIDGRVPHSI------LLEIFTDEGIGTMV 284
>sp|Q3Z705|PROB_DEHE1 Glutamate 5-kinase OS=Dehalococcoides ethenogenes (strain 195)
GN=proB PE=3 SV=1
Length = 373
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 41 LDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPT-EPNAVLLREIAVGEDG 99
+D++Q D + +A ++ D ++ LT++ G+Y+ PT P+A L+ E+
Sbjct: 143 VDEIQQAKFGDNDNLSAMVANLIEADLLLILTNIRGLYTADPTLHPDARLITEV------ 196
Query: 100 SWSITKPTLQHMNNQVEITVAAHDT---TGGMVTKISEAAMIAKLGIDVYI 147
+ + ++E A TGGMVTK+ A + G++V I
Sbjct: 197 ---------KEITEELEKLAAGSSNKLGTGGMVTKLEAARLATSSGVNVII 238
>sp|B5ZUE4|PROB_RHILW Glutamate 5-kinase OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=proB PE=3 SV=1
Length = 389
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
+ + + +K G VP+++ + D V I GD + +A D +V L+D+ G+Y
Sbjct: 125 ATINQLLKIGAVPIINEN---DTVATSEIRYGDNDRLAARVATMTGADLLVLLSDIDGLY 181
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM 137
+ PP +PNA L I S P ++ M A+ + GGM TKI +
Sbjct: 182 TAPPHLDPNATFLETI--------SEITPEIEAMAG----GAASELSRGGMRTKIDAGKI 229
Query: 138 IAKLGIDVYIVKAASSHSVKALSGELR 164
G + I + + A+ R
Sbjct: 230 ATTSGCAMIIASGKTDSPLSAIENGAR 256
>sp|B6JD20|PROB_OLICO Glutamate 5-kinase OS=Oligotropha carboxidovorans (strain ATCC
49405 / DSM 1227 / OM5) GN=proB PE=3 SV=1
Length = 397
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 21 SVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGD--VIIRHLAAYMKPDYVVFLTDVLGVY 78
S ++K ++ VPV++ + D V I GD + +A D ++ L+D+ G+Y
Sbjct: 127 STISKLLEWRAVPVINEN---DTVATSEIRYGDNDRLAARVATMTSSDLLILLSDIDGLY 183
Query: 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHD---TTGGMVTKISE 134
+ PP PNA L+ P ++ + +E A + GGM TKI
Sbjct: 184 TAPPGINPNAKLI---------------PVVESVTADIEAMAGAAGSELSRGGMRTKIEA 228
Query: 135 AAMIAKLGIDVYIVKAASSHSVKAL 159
A + G + I H ++A+
Sbjct: 229 AKIATSAGTHMLIASGKIDHPLQAI 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,150,615
Number of Sequences: 539616
Number of extensions: 2843940
Number of successful extensions: 8181
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 380
Number of HSP's that attempted gapping in prelim test: 7976
Number of HSP's gapped (non-prelim): 444
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)