Query 029969
Match_columns 184
No_of_seqs 115 out of 1275
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 10:05:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ll9_A Isopentenyl phosphate k 100.0 2.7E-30 9.3E-35 215.8 13.8 155 1-177 108-266 (269)
2 3ll5_A Gamma-glutamyl kinase r 100.0 3.8E-28 1.3E-32 200.7 13.4 144 1-177 102-249 (249)
3 3d40_A FOMA protein; fosfomyci 100.0 8.6E-28 2.9E-32 202.2 14.9 155 3-179 122-283 (286)
4 2ap9_A NAG kinase, acetylgluta 99.9 7.2E-27 2.5E-31 197.4 15.3 138 13-180 152-292 (299)
5 2rd5_A Acetylglutamate kinase- 99.9 7.9E-27 2.7E-31 197.2 14.4 138 13-178 158-298 (298)
6 2egx_A Putative acetylglutamat 99.9 1.4E-26 4.8E-31 193.0 13.0 133 13-177 133-269 (269)
7 2v5h_A Acetylglutamate kinase; 99.9 1.8E-26 6.1E-31 197.1 13.9 141 13-181 170-313 (321)
8 2ako_A Glutamate 5-kinase; str 99.9 4E-27 1.4E-31 194.0 9.3 141 13-177 103-251 (251)
9 2j5v_A Glutamate 5-kinase; pro 99.9 7.1E-27 2.4E-31 202.9 9.9 147 13-183 110-262 (367)
10 3k4o_A Isopentenyl phosphate k 99.9 1.1E-25 3.8E-30 187.7 14.6 148 2-180 118-266 (266)
11 2buf_A Acetylglutamate kinase; 99.9 3.9E-25 1.3E-29 187.0 13.7 138 13-181 159-299 (300)
12 2bty_A Acetylglutamate kinase; 99.9 4.6E-25 1.6E-29 184.8 13.9 136 13-180 143-281 (282)
13 2j4j_A Uridylate kinase; trans 99.9 3E-25 1E-29 180.2 9.9 130 17-178 92-225 (226)
14 2e9y_A Carbamate kinase; trans 99.9 2E-24 6.9E-29 184.0 12.8 135 15-178 171-315 (316)
15 2we5_A Carbamate kinase 1; arg 99.9 1.5E-24 5.2E-29 184.2 11.8 135 15-177 167-309 (310)
16 1gs5_A Acetylglutamate kinase; 99.9 3.5E-24 1.2E-28 177.2 11.3 134 12-177 122-257 (258)
17 3l86_A Acetylglutamate kinase; 99.9 1.3E-23 4.3E-28 176.5 13.2 115 13-151 155-270 (279)
18 3zzh_A Acetylglutamate kinase; 99.9 7.9E-24 2.7E-28 179.8 11.7 137 12-180 162-303 (307)
19 1e19_A Carbamate kinase-like c 99.9 2.5E-23 8.6E-28 177.1 13.4 136 15-178 171-314 (314)
20 3d2m_A Putative acetylglutamat 99.9 2.5E-23 8.7E-28 184.2 13.3 135 13-180 168-305 (456)
21 2ogx_A Molybdenum storage prot 99.9 1E-23 3.6E-28 176.5 10.1 134 18-180 132-273 (276)
22 3kzf_A Carbamate kinase; argin 99.9 3E-23 1E-27 176.2 11.6 135 16-179 174-317 (317)
23 2ogx_B Molybdenum storage prot 99.9 3.1E-23 1E-27 173.0 9.7 138 14-179 125-270 (270)
24 3ek6_A Uridylate kinase; UMPK 99.9 8.4E-23 2.9E-27 168.2 11.7 124 17-178 116-241 (243)
25 1z9d_A Uridylate kinase, UK, U 99.9 1.1E-22 3.8E-27 167.8 12.2 123 18-179 116-241 (252)
26 3s6g_A N-acetylglutamate kinas 99.9 5.8E-23 2E-27 182.8 10.9 137 13-179 173-311 (460)
27 2brx_A Uridylate kinase; UMP k 99.9 1.5E-23 5.1E-28 172.5 6.6 130 17-178 112-244 (244)
28 2va1_A Uridylate kinase; UMPK, 99.9 1.1E-22 3.9E-27 168.3 11.5 121 18-177 132-255 (256)
29 4ab7_A Protein Arg5,6, mitocho 99.9 1.9E-22 6.3E-27 179.6 13.5 135 13-179 163-302 (464)
30 4a7w_A Uridylate kinase; trans 99.9 1.3E-22 4.4E-27 166.8 11.2 124 17-177 115-240 (240)
31 2ij9_A Uridylate kinase; struc 99.9 5.8E-23 2E-27 165.9 8.6 129 16-177 88-219 (219)
32 1ybd_A Uridylate kinase; alpha 99.9 1.9E-22 6.6E-27 164.6 11.4 121 19-178 117-239 (239)
33 2a1f_A Uridylate kinase; PYRH, 99.9 2.7E-22 9.4E-27 164.9 10.8 124 19-181 118-243 (247)
34 3nwy_A Uridylate kinase; allos 99.9 1.5E-22 5E-27 170.2 8.5 121 18-177 158-280 (281)
35 3s6k_A Acetylglutamate kinase; 99.9 1.3E-22 4.5E-27 180.8 6.0 138 12-179 175-314 (467)
36 2jjx_A Uridylate kinase, UMP k 99.9 2.2E-21 7.4E-26 160.4 11.9 124 18-179 121-247 (255)
37 4axs_A Carbamate kinase; oxido 99.8 7.6E-21 2.6E-25 162.9 13.2 135 15-177 188-331 (332)
38 3c1m_A Probable aspartokinase; 99.8 1.5E-19 5.2E-24 161.3 11.1 131 13-180 167-302 (473)
39 3ab4_A Aspartokinase; aspartat 99.8 2.5E-19 8.7E-24 157.7 9.8 120 12-153 110-235 (421)
40 3l76_A Aspartokinase; alloster 99.7 1.2E-17 4E-22 153.0 11.0 118 13-152 111-235 (600)
41 2cdq_A Aspartokinase; aspartat 99.7 3.7E-17 1.2E-21 147.2 12.7 122 21-179 197-324 (510)
42 3tvi_A Aspartokinase; structur 99.7 2.1E-17 7.1E-22 146.7 10.4 131 2-153 134-269 (446)
43 2j0w_A Lysine-sensitive aspart 99.7 9.6E-17 3.3E-21 142.5 10.7 118 22-180 169-293 (449)
44 3ewi_A N-acylneuraminate cytid 45.2 47 0.0016 24.4 5.8 13 69-81 11-23 (168)
45 1k1e_A Deoxy-D-mannose-octulos 24.4 1.2E+02 0.004 21.8 4.9 12 69-80 10-21 (180)
No 1
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.97 E-value=2.7e-30 Score=215.82 Aligned_cols=155 Identities=37% Similarity=0.563 Sum_probs=120.6
Q ss_pred CCCCcceeeccCCCcceechHHHHHHHHcCCeeEEcCceEeeCC--CceeeechhHHHHHHHHhcCCCEEEEeeccccee
Q 029969 1 MSPFSCGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDV--QGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVY 78 (184)
Q Consensus 1 ~~~~~~~~~~~~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~--~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy 78 (184)
|++.++++. +.|+++.+|.+.|+.+|++|+|||++|+...++. .+.+++++|++|+++|.+|+||+|+|+|||||||
T Consensus 108 l~g~~~~~~-~~g~v~~v~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~ 186 (269)
T 3ll9_A 108 MQPSAFIRA-HAGRISHADISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVY 186 (269)
T ss_dssp CCGGGTEEE-ETTEEEEECCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSSCB
T ss_pred EcchHcCeE-ecCeeeeecHHHHHHHHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCEEE
Confidence 455666444 3799999999999999999999999997776544 5678999999999999999999999999999999
Q ss_pred cCCC-cCCCceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-
Q 029969 79 SHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV- 156 (184)
Q Consensus 79 ~~dp-~~p~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l- 156 (184)
++|| .+|++++|+++++.|+ ...+.. +.+.+++|||.+|+++|..++++|++++|++++.++.+
T Consensus 187 ~~dp~~~~~a~~i~~i~~~e~------~~~l~~--------~~~~~~tgGM~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l~ 252 (269)
T 3ll9_A 187 TRNPKKHPDARLLDVIGSLDD------LESLDG--------TLNTDVTGGMVGKIRELLLLAEKGVESEIINAAVPGNIE 252 (269)
T ss_dssp SSCTTTCTTCCBCSBCCC---------------------------------SHHHHHHHHHHHTTCCEEEEESSSTTHHH
T ss_pred cCCCCcCCcceEccccCHHHH------HHHhcc--------cCCCcCcCCcHHHHHHHHHHHhCCCeEEEEeCCCchHHH
Confidence 9999 6899999999999874 112211 12468999999999999999999999999999999986
Q ss_pred hhhcCCcccCCCCCccccEEE
Q 029969 157 KALSGELREKIPDDWLGTVIH 177 (184)
Q Consensus 157 ~~l~Ge~~~~~~~~~~GT~i~ 177 (184)
++|+|+.. .||.|.
T Consensus 253 ~~~~g~~~-------~GT~i~ 266 (269)
T 3ll9_A 253 RALLGEEV-------RGTRIT 266 (269)
T ss_dssp HHHHTCCC-------SSEEC-
T ss_pred HHHCCCCC-------CcEEEE
Confidence 78999872 299987
No 2
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=99.95 E-value=3.8e-28 Score=200.67 Aligned_cols=144 Identities=34% Similarity=0.599 Sum_probs=113.1
Q ss_pred CCCCcceeeccCCCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecC
Q 029969 1 MSPFSCGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSH 80 (184)
Q Consensus 1 ~~~~~~~~~~~~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~ 80 (184)
|++.++++ .|++ +.+.|+.+|++|+|||++|+.+.++..+.+++++|++|+++|.+|+||+|+|+|||||||++
T Consensus 102 l~~~~~~~---~g~v---~~~~i~~ll~~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~ 175 (249)
T 3ll5_A 102 VPISALRY---DGRF---DYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSK 175 (249)
T ss_dssp CCGGGSCB---SSSB---CCHHHHHHHHTTCEEEEECEEEEEETTEEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSS
T ss_pred EcHHHccc---ccEE---cHHHHHHHHHCCCEEEECCCEEEcCCCceeeecHHHHHHHHHHhcCCCEEEEEeCCCccCCC
Confidence 34555544 3776 89999999999999999997776544457899999999999999999999999999999999
Q ss_pred CC-cCCCceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHH-HHCCCeEEEEcCCCcChh-h
Q 029969 81 PP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMI-AKLGIDVYIVKAASSHSV-K 157 (184)
Q Consensus 81 dp-~~p~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a-~~~gi~v~I~~g~~~~~l-~ 157 (184)
|| .+|+++++++++ ++ +.... .+.+++|||.+|+++|..+ +++|++++|++++.++.+ +
T Consensus 176 dp~~~~~a~~i~~i~-~~----------~~~~~-------~~~~~tGgM~~Kl~aA~~a~~~~Gv~v~I~~g~~~~~l~~ 237 (249)
T 3ll5_A 176 DPKRNPDAVLLRDID-TN----------ITFDR-------VQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERIGD 237 (249)
T ss_dssp CTTTCTTCCBCCEEC-CC----------C--------------------HHHHHHHHHHHTTCTTCEEEEETTSGGGGGG
T ss_pred CCCCCCCcEEHHHHH-HH----------Hhccc-------CCCeeECCHHHHHHHHHHHHHhcCCEEEEEeCCChhHHHH
Confidence 99 789999999993 22 21110 2468999999999999999 899999999999999986 8
Q ss_pred hhcCCcccCCCCCcc-ccEEE
Q 029969 158 ALSGELREKIPDDWL-GTVIH 177 (184)
Q Consensus 158 ~l~Ge~~~~~~~~~~-GT~i~ 177 (184)
|.|+. . ||.|+
T Consensus 238 -l~g~~--------~~GT~i~ 249 (249)
T 3ll5_A 238 -IGKES--------FIGTVIR 249 (249)
T ss_dssp -TTSTT--------CCSEEEC
T ss_pred -hCCCC--------CCCEEeC
Confidence 99876 4 99984
No 3
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.95 E-value=8.6e-28 Score=202.25 Aligned_cols=155 Identities=22% Similarity=0.233 Sum_probs=121.6
Q ss_pred CCcceeeccCCCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHh-cCCCEEEEeecccceecCC
Q 029969 3 PFSCGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAY-MKPDYVVFLTDVLGVYSHP 81 (184)
Q Consensus 3 ~~~~~~~~~~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~-l~Ad~li~ltdVdGVy~~d 81 (184)
+.+..| +.+| ++.++.+.|+.+|++|+|||++|+...++....+++++|++|+++|.. |+||+|+|+|||||||++|
T Consensus 122 ~~~~~~-t~dg-~~~~~~~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~d 199 (286)
T 3d40_A 122 LAAMCT-LRNG-IPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDG 199 (286)
T ss_dssp GGGTEE-EETT-EEEECCSHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC
T ss_pred eecCCc-ccCC-eEEehHHHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCC
Confidence 334444 4557 788999999999999999999997666544446899999999999999 9999999999999999998
Q ss_pred CcCCCceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhc
Q 029969 82 PTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALS 160 (184)
Q Consensus 82 p~~p~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~ 160 (184)
|+ ++++|++|+..|+ .++.++.. .+.+.+++|||.+|+++|..|+++|++++|+|++.|+.+ ++|+
T Consensus 200 P~--~a~~i~~is~~e~-------~~l~~~~~----~~~~~~~tggM~~Kl~Aa~~a~~~gv~v~I~~g~~p~~l~~l~t 266 (286)
T 3d40_A 200 AG--GDTILPEVDARSP-------EQAYAALW----GSSEWDATGAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTA 266 (286)
T ss_dssp -----CEECCEEETTSC-------HHHHHHHH----HSCC----CHHHHHHHHHHHHHHTTCEEEEEECCTTCCCGGGGS
T ss_pred CC--CCcCCcccCHHHH-------HHHHHhhc----cccCCcccCcHHHHHHHHHHHHHCCCcEEEEeCCCCCcHHHHhc
Confidence 88 7899999999885 23333211 112567999999999999999999999999999999986 7888
Q ss_pred C-----CcccCCCCCccccEEEcC
Q 029969 161 G-----ELREKIPDDWLGTVIHFS 179 (184)
Q Consensus 161 G-----e~~~~~~~~~~GT~i~~~ 179 (184)
+ +.+ .||.|..+
T Consensus 267 ~~~~~~~~~-------~~t~i~~~ 283 (286)
T 3d40_A 267 PFSSWPAHV-------RSTRITTT 283 (286)
T ss_dssp CGGGSCTTC-------CCEEEEC-
T ss_pred CcccCcccc-------cceeeeec
Confidence 7 553 59999864
No 4
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=99.95 E-value=7.2e-27 Score=197.42 Aligned_cols=138 Identities=21% Similarity=0.306 Sum_probs=119.3
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+|..++.+.|+.+|++|+|||++|.++ ++.+..+++++|++|+++|..|+||+|+|+|||||||++||+ ++++|++
T Consensus 152 g~v~~v~~~~i~~lL~~g~IpVv~~v~~-~~~G~~~~l~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~--~~~~i~~ 228 (299)
T 2ap9_A 152 GDVDQVNTAAMLDLVAAGRIPVVSTLAP-DADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPD--RDSLVSE 228 (299)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEEESEEE-CTTCCEEEECHHHHHHHHHHHTTCSEEEEEESSSSEETTTTC--TTCEESE
T ss_pred eeEEEecHHHHHHHHhCCCeEEECCeeE-CCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCC--CCcChhh
Confidence 7788899999999999999999998654 333346788999999999999999999999999999999887 3689999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCCCcChh--hhhcCCcccCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSV--KALSGELREKIPD 169 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l--~~l~Ge~~~~~~~ 169 (184)
|+++| +.++. .+++|||.+|+++|..++++|++ ++|+|++.|+++ ++|+|+..
T Consensus 229 is~~e----------~~~l~---------~~~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~----- 284 (299)
T 2ap9_A 229 IDTGT----------LAQLL---------PTLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGT----- 284 (299)
T ss_dssp EEHHH----------HHHHG---------GGSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCC-----
T ss_pred cCHHH----------HHHHH---------HhhcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCC-----
Confidence 99976 33331 26899999999999999999998 999999999973 68899874
Q ss_pred CccccEEEcCc
Q 029969 170 DWLGTVIHFSR 180 (184)
Q Consensus 170 ~~~GT~i~~~~ 180 (184)
||.|.++.
T Consensus 285 ---GT~i~~~~ 292 (299)
T 2ap9_A 285 ---GTKVVRGE 292 (299)
T ss_dssp ---SEEEECCC
T ss_pred ---cEEEecCC
Confidence 99998754
No 5
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=99.94 E-value=7.9e-27 Score=197.18 Aligned_cols=138 Identities=27% Similarity=0.431 Sum_probs=118.6
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+++.+|.+.|+.+|++|+|||+++.++ ++.+..+++++|++|+++|.+|+||+|+|+|||||||++||+ | +++|++
T Consensus 158 g~v~~v~~~~i~~lL~~g~IpVi~~v~~-~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~-~-a~~i~~ 234 (298)
T 2rd5_A 158 GEVARVDPSVLRPLVDYGYIPVIASVAA-DDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKED-P-SSLIKE 234 (298)
T ss_dssp EEEEEECGGGHHHHHHTTCEEEEESEEE-CTTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSEESSSSC-T-TSEECE
T ss_pred eEEEEECHHHHHHHHhCCCEEEEcCeeE-CCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCC-C-CCCccc
Confidence 6778899999999999999999998655 333346788999999999999999999999999999999887 4 899999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCCCcChh--hhhcCCcccCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSV--KALSGELREKIPD 169 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l--~~l~Ge~~~~~~~ 169 (184)
|+.+|+ .++. ...+++|||.+|+++|..++++|++ ++|+|++.++.+ ++|+|+.
T Consensus 235 is~~e~----------~~~~-------~~g~~~gGM~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~------ 291 (298)
T 2rd5_A 235 IDIKGV----------KKMI-------EDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEG------ 291 (298)
T ss_dssp EEHHHH----------HHHH-------HTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSC------
T ss_pred CCHHHH----------HHHH-------HCCCCCCchHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCC------
Confidence 999763 3321 1247899999999999999999998 999999999985 6889877
Q ss_pred CccccEEEc
Q 029969 170 DWLGTVIHF 178 (184)
Q Consensus 170 ~~~GT~i~~ 178 (184)
.||.|.+
T Consensus 292 --~GT~i~~ 298 (298)
T 2rd5_A 292 --AGTMITG 298 (298)
T ss_dssp --SEEEEEC
T ss_pred --CceEEeC
Confidence 3999975
No 6
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=99.94 E-value=1.4e-26 Score=193.02 Aligned_cols=133 Identities=26% Similarity=0.381 Sum_probs=111.4
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+++.+|.+.|+.+|++|+|||+++.++. +.+..+++++|++|+++|.+|+||+|+|+|||||||+ || .|++++|++
T Consensus 133 g~i~~v~~~~i~~ll~~g~ipVi~~v~~~-~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~-dp-~~~a~~i~~ 209 (269)
T 2egx_A 133 GTVEEVNKALLDLLLQAGYLPVLTPPALS-YENEAINTDGDQIAALLATLYGAEALVYLSNVPGLLA-RY-PDEASLVRE 209 (269)
T ss_dssp ECCCEECHHHHHHHHHTTCEEEEECCEEE-TTSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSCBC--------CBCCE
T ss_pred CCceEECHHHHHHHHHCCCEEEEcCcEEC-CCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCchhhhc-CC-CCCcccccc
Confidence 77888999999999999999999986654 3334679999999999999999999999999999999 78 578999999
Q ss_pred eeccCCCCcccchhHHH--hhccchhhhcccccccCchHHHHHHHHHHHHCCC-eEEEEcCCCcChh-hhhcCCcccCCC
Q 029969 93 IAVGEDGSWSITKPTLQ--HMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI-DVYIVKAASSHSV-KALSGELREKIP 168 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~--~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi-~v~I~~g~~~~~l-~~l~Ge~~~~~~ 168 (184)
++.+|+ . ++ +.+++|||.+|+++|..|+++|+ +++|+|++.++.+ ++|+| .
T Consensus 210 i~~~e~----------~~~~l---------~~~~~ggm~~Kl~aa~~a~~~gv~~v~I~~g~~~~~l~~~l~g--~---- 264 (269)
T 2egx_A 210 IPVERI----------EDPEY---------LALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRALSG--E---- 264 (269)
T ss_dssp ECHHHH----------HCHHH---------HTTSCHHHHHHHHHHHHHHHTTCSCEEEEESSSSSHHHHHHTT--C----
T ss_pred CCHHHh----------hHHHh---------cCCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCchHHHHHhCC--C----
Confidence 999763 2 22 24789999999999999999999 7999999999986 78887 2
Q ss_pred CCccccEEE
Q 029969 169 DDWLGTVIH 177 (184)
Q Consensus 169 ~~~~GT~i~ 177 (184)
||.|.
T Consensus 265 ----GT~i~ 269 (269)
T 2egx_A 265 ----GTVVR 269 (269)
T ss_dssp ----SEEEC
T ss_pred ----CeEEC
Confidence 99884
No 7
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=99.94 E-value=1.8e-26 Score=197.14 Aligned_cols=141 Identities=20% Similarity=0.363 Sum_probs=118.6
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+++.+|.+.|+.+|++|+|||+++.++ ++.+..+++++|++|+++|.+|+||+|+|+|||||||++||+ ++++|++
T Consensus 170 g~v~~v~~~~i~~lL~~g~IpVi~~v~~-~~~G~~~~i~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~--~a~~i~~ 246 (321)
T 2v5h_A 170 GEVNSVNSEVIEPLLERGYIPVISSVAA-DENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKR--PESLIPR 246 (321)
T ss_dssp EEEEEECGGGTHHHHHTTCEEEEESEEE-CTTSCEEECCHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTC--TTCBCCE
T ss_pred ceeEEecHHHHHHHHHCCCeEEEeCceE-CCCCCEEEeCHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCC--CCeeeeE
Confidence 6678899999999999999999997654 333345778999999999999999999999999999999887 4799999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCCCcChh--hhhcCCcccCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSV--KALSGELREKIPD 169 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l--~~l~Ge~~~~~~~ 169 (184)
|+..|+ .++. ...+++|||.+|+++|..|+++|++ ++|+|++.++.+ ++|+|+.
T Consensus 247 is~~e~----------~~l~-------~~g~~~gGM~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~------ 303 (321)
T 2v5h_A 247 LNIPQS----------RELI-------AQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAG------ 303 (321)
T ss_dssp EEHHHH----------HHHH-------HTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCC------
T ss_pred EcHHHH----------HHHH-------hCCCCcCcHHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCC------
Confidence 999763 3321 1246899999999999999999998 999999999974 6788876
Q ss_pred CccccEEEcCcc
Q 029969 170 DWLGTVIHFSRE 181 (184)
Q Consensus 170 ~~~GT~i~~~~~ 181 (184)
.||+|.++.-
T Consensus 304 --~GT~I~~~~~ 313 (321)
T 2v5h_A 304 --IGTMIVGSGY 313 (321)
T ss_dssp --SEEEEECC--
T ss_pred --CceEEECCcc
Confidence 3999987543
No 8
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=99.94 E-value=4e-27 Score=194.03 Aligned_cols=141 Identities=18% Similarity=0.294 Sum_probs=115.1
Q ss_pred CCcceech-HHHHHHHHcCCeeEEc-CceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCcee
Q 029969 13 GNLPVADL-SVVAKTIKSGFVPVLH-GDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVL 89 (184)
Q Consensus 13 g~v~~~~~-~~I~~lL~~G~IPIv~-gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~l 89 (184)
|+++.++. +.|+.+|++|+|||++ +|++.. .+.+++++|++|+++|..|+||+|+|+|||||||++|| ++|++++
T Consensus 103 ~~~~~~~~~~~i~~ll~~g~ipVi~~~d~v~~--~~~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~ 180 (251)
T 2ako_A 103 SRKATKHAKNAIDMMINLGILPIINENDATAI--EEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKR 180 (251)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEECTTTCC--HHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCB
T ss_pred CcceEehHHHHHHHHHHCCCEEEEeCCCceee--cceeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeE
Confidence 45556666 8999999999999999 555542 12368999999999999999999999999999999999 6799999
Q ss_pred eeeeecc--CCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-h--hhcCCcc
Q 029969 90 LREIAVG--EDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-K--ALSGELR 164 (184)
Q Consensus 90 i~~I~~~--e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~--~l~Ge~~ 164 (184)
|+++++. |+ .++.. .+.+.+++|||.+|+++|..|+++|++++|+|++.++.+ + +|+|+..
T Consensus 181 i~~i~~~~~e~----------~~~~~----~~~~~~~~ggm~~k~~aa~~a~~~gv~v~I~~g~~~~~l~~~~~~~g~~~ 246 (251)
T 2ako_A 181 LEKITHIKEEW----------LQATI----KTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGFDLSVAKTFLLEDKQIG 246 (251)
T ss_dssp CCEESCCCGGG----------C-------------CBSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHHHHHHSCCCCS
T ss_pred eeEeccchHHH----------HHHhc----ccCCCCccCchHHHHHHHHHHHHCCCeEEEEeCCChhhhhhhHHhcCCCC
Confidence 9999998 53 22211 012458999999999999999999999999999999986 7 8899773
Q ss_pred cCCCCCccccEEE
Q 029969 165 EKIPDDWLGTVIH 177 (184)
Q Consensus 165 ~~~~~~~~GT~i~ 177 (184)
||.|.
T Consensus 247 --------GT~i~ 251 (251)
T 2ako_A 247 --------GTLFE 251 (251)
T ss_dssp --------SEEEC
T ss_pred --------ceEeC
Confidence 99984
No 9
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=99.94 E-value=7.1e-27 Score=202.93 Aligned_cols=147 Identities=22% Similarity=0.349 Sum_probs=94.1
Q ss_pred CCcceech-HHHHHHHHcCCeeEEc-CceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCcee
Q 029969 13 GNLPVADL-SVVAKTIKSGFVPVLH-GDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVL 89 (184)
Q Consensus 13 g~v~~~~~-~~I~~lL~~G~IPIv~-gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~l 89 (184)
++.+.+|. +.|+.||+.|+|||++ +|.+..+ +..++++|++|+++|..++||+|+|||||||||++|| .+|++++
T Consensus 110 ~~~r~~n~~~~i~~LL~~g~IPIv~end~v~~~--el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~ 187 (367)
T 2j5v_A 110 DRERFLNARDTLRALLDNNVVPVINENDAVATA--EIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAEL 187 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEECTTSCCG--GGCCCSHHHHHHHHHHHHTCSEEEEEECC----------------
T ss_pred CceEEEhHHHHHHHHHHCCCEEEECCCCceecc--cccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeE
Confidence 44555666 8999999999999999 7777532 2358899999999999999999999999999999999 7899999
Q ss_pred eeeeec--cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccC
Q 029969 90 LREIAV--GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREK 166 (184)
Q Consensus 90 i~~I~~--~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~ 166 (184)
|++++. .|+ .++.. .+.+.+.+|||.+|+++|..|+++|++++|++++.++.+ ++|+|+..
T Consensus 188 I~~i~~~~~e~----------~~l~~----~~~s~~gtGgM~~Kl~Aa~~a~~~Gv~v~I~~g~~~~~L~~~l~g~~~-- 251 (367)
T 2j5v_A 188 IKDVYGIDDAL----------RAIAG----DSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISV-- 251 (367)
T ss_dssp ----------------------------------------CHHHHHHHHHHHHTTCEEEEEETTSTTHHHHHHHTCCC--
T ss_pred eeeeCCCHHHH----------HHHhh----ccCCCcCcCccHHHHHHHHHHHHcCCCEEEEcCCCchHHHHHhcCCCC--
Confidence 999998 553 33321 012467999999999999999999999999999999987 78999873
Q ss_pred CCCCccccEEEcCcccc
Q 029969 167 IPDDWLGTVIHFSREEV 183 (184)
Q Consensus 167 ~~~~~~GT~i~~~~~~~ 183 (184)
||+|.+..+++
T Consensus 252 ------GT~i~~~~~~~ 262 (367)
T 2j5v_A 252 ------GTLFHAQATPL 262 (367)
T ss_dssp ------SEEECCCSSCC
T ss_pred ------cEEEEcCcccc
Confidence 99999876653
No 10
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.93 E-value=1.1e-25 Score=187.71 Aligned_cols=148 Identities=32% Similarity=0.427 Sum_probs=120.0
Q ss_pred CCCcceeeccCCCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCC
Q 029969 2 SPFSCGWSTSGGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHP 81 (184)
Q Consensus 2 ~~~~~~~~~~~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~d 81 (184)
++.+++|.+ .| +.+|.+.|+.+|++|+|||++||...++..+.+++++|++|+++|.+|+||+|+|+||||||| .|
T Consensus 118 ~~~d~~~~~-~g--~~v~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~-~d 193 (266)
T 3k4o_A 118 QPSSFVVFG-DK--LIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVL-ID 193 (266)
T ss_dssp CGGGTCEES-SS--CBCCCHHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSB-SS
T ss_pred eHHHcCccc-Cc--eEecHHHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEE-eC
Confidence 455565554 34 678999999999999999999976665445678999999999999999999999999999999 53
Q ss_pred CcCCCceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhc
Q 029969 82 PTEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALS 160 (184)
Q Consensus 82 p~~p~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~ 160 (184)
.+++++++.+|+ +. +.+... ++.+.+++|||.+|+++|..+++ +++|++++.++.+ ++|+
T Consensus 194 -----~~~i~~~~~~e~------~~-l~~~~~----~~~~~~~tGGM~~Kv~aa~~a~~---~v~I~~g~~~~~l~~~l~ 254 (266)
T 3k4o_A 194 -----NKPIKRIDKNNI------YK-ILNYLS----GSNSIDVTGGMKYKIEMIRKNKC---RGFVFNGNKANNIYKALL 254 (266)
T ss_dssp -----SSBCSEECTTTH------HH-HHHHHH----STTCSCCSSHHHHHHHHHHHTTC---EEEEEETTSTTHHHHHHT
T ss_pred -----CeecCcCCHHHH------HH-HHHHhc----cccCCcccCCHHHHHHHHHHHhc---CEEEEeCCCccHHHHHhC
Confidence 468889988763 22 222211 12457899999999999999887 9999999999987 7899
Q ss_pred CCcccCCCCCccccEEEcCc
Q 029969 161 GELREKIPDDWLGTVIHFSR 180 (184)
Q Consensus 161 Ge~~~~~~~~~~GT~i~~~~ 180 (184)
|+.. ||+|.|.+
T Consensus 255 g~~~--------GT~i~~~~ 266 (266)
T 3k4o_A 255 GEVE--------GTEIDFSE 266 (266)
T ss_dssp TCCC--------SEEEECCC
T ss_pred CCCC--------ceEEEeCC
Confidence 9874 99999864
No 11
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.92 E-value=3.9e-25 Score=187.01 Aligned_cols=138 Identities=19% Similarity=0.337 Sum_probs=116.8
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+|+.+|.+.|+.+|++|+|||+++.++ ++.+..+++++|++|+++|.+|+||+|+|+|||||||++ ++++|++
T Consensus 159 g~v~~v~~~~i~~lL~~g~IpVi~~v~~-~~~G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~-----~a~~i~~ 232 (300)
T 2buf_A 159 GEVTGVNVGLLNMLVKGDFIPVIAPIGV-GSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDK-----QGQVLTG 232 (300)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEEEEEEE-CTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCT-----TSCBCCE
T ss_pred eeEEEECHHHHHHHHHCCCEEEEcCcee-CCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECC-----CCcChhh
Confidence 7788899999999999999999996544 333346788999999999999999999999999999986 4799999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCCCcChh--hhhcCCcccCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSV--KALSGELREKIPD 169 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l--~~l~Ge~~~~~~~ 169 (184)
++..|+ .++. ...+++|||.+|+++|..++++|++ ++|+|++.++.+ ++|+|+.
T Consensus 233 i~~~e~----------~~~~-------~~~~~~ggM~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~------ 289 (300)
T 2buf_A 233 LSTEQV----------NELI-------ADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSG------ 289 (300)
T ss_dssp ECHHHH----------HHHH-------HTTCSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTC------
T ss_pred CCHHHH----------HHHH-------HcCCCCCccHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCC------
Confidence 999763 3331 1246899999999999999999998 999999999974 6788876
Q ss_pred CccccEEEcCcc
Q 029969 170 DWLGTVIHFSRE 181 (184)
Q Consensus 170 ~~~GT~i~~~~~ 181 (184)
.||.|.++++
T Consensus 290 --~GT~i~~~~~ 299 (300)
T 2buf_A 290 --VGTLISNRKR 299 (300)
T ss_dssp --CSEEEECCCC
T ss_pred --CceEEEeCCC
Confidence 3999997653
No 12
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.92 E-value=4.6e-25 Score=184.75 Aligned_cols=136 Identities=21% Similarity=0.353 Sum_probs=115.7
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+++.+|.+.|+.+|++|+|||++|.++ ++.+..+++++|++|+++|..|+||+|+|+|||||||++ | ++|++
T Consensus 143 g~v~~~~~~~i~~ll~~g~IpVi~~v~~-~~~G~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~----~--~~i~~ 215 (282)
T 2bty_A 143 GKVKKVNPEILHALIENDYIPVIAPVGI-GEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKD----G--KLIST 215 (282)
T ss_dssp EEEEEECTHHHHHHHHTTCEEEEESEEE-CSSSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCEET----T--EECCE
T ss_pred eEEEEecHHHHHHHHHCCCEEEECCCcc-CCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeecC----c--hhhhh
Confidence 6778899999999999999999998755 333346788999999999999999999999999999986 3 89999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCCCcChh--hhhcCCcccCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSV--KALSGELREKIPD 169 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l--~~l~Ge~~~~~~~ 169 (184)
++++|+ .++. ...+++|||.+|+++|..|+++|++ ++|+|++.++.+ ++|+|+.
T Consensus 216 i~~~e~----------~~~~-------~~g~~~gGM~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~------ 272 (282)
T 2bty_A 216 LTPDEA----------EELI-------RDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKG------ 272 (282)
T ss_dssp ECHHHH----------HHHH-------TTTCSCTTHHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSC------
T ss_pred CCHHHH----------HHHH-------HcCCCCCcHHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCC------
Confidence 999763 3331 1356899999999999999999998 999999999974 5788876
Q ss_pred CccccEEEcCc
Q 029969 170 DWLGTVIHFSR 180 (184)
Q Consensus 170 ~~~GT~i~~~~ 180 (184)
.||.|.+++
T Consensus 273 --~GT~i~~~~ 281 (282)
T 2bty_A 273 --IGTMIKELE 281 (282)
T ss_dssp --SSEEECCCC
T ss_pred --CceEEEeCC
Confidence 399998764
No 13
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=99.92 E-value=3e-25 Score=180.21 Aligned_cols=130 Identities=17% Similarity=0.204 Sum_probs=107.0
Q ss_pred eechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeec
Q 029969 17 VADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 17 ~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~ 95 (184)
.++.+.|+.+|++|.|||++| + ..++++|++|+++|..|+||+|+|+|||||||++|| .+|++++|+++++
T Consensus 92 ~~~~~~i~~ll~~g~ipVi~g-g-------~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~ 163 (226)
T 2j4j_A 92 PQSLEEFIQDWSHGKVVVTGG-F-------QPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTT 163 (226)
T ss_dssp CSSHHHHHHHHTTSSBEEECC-C-------STTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEH
T ss_pred cCCHHHHHHHHHCCCEEEEcC-C-------CCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCH
Confidence 467889999999999999998 1 237999999999999999999999999999999999 7899999999999
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCch--HHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGM--VTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWL 172 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm--~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~ 172 (184)
.|+ .++.. .....+||| ..|++++..|.+.|++++|+|++.++.+ ++|+|+..
T Consensus 164 ~e~----------~~l~~------~~~~~~ggm~~~~k~~a~~~a~~~gi~v~I~~~~~~~~l~~~~~g~~~-------- 219 (226)
T 2j4j_A 164 QDL----------RKILE------GSQSVQAGTYELLDPLAIKIVERSKIRVIVMNYRKLNRIIDILKGEEV-------- 219 (226)
T ss_dssp HHH----------HHHHC----------------CCSCHHHHHHHHHTTCEEEEEEGGGGGGHHHHHTTCSS--------
T ss_pred HHH----------HHHhh------cCCCCcCCccccchHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCC--------
Confidence 763 22211 124678999 9999999999999999999999999987 68999773
Q ss_pred ccEEEc
Q 029969 173 GTVIHF 178 (184)
Q Consensus 173 GT~i~~ 178 (184)
||+|.+
T Consensus 220 GT~i~~ 225 (226)
T 2j4j_A 220 SSIIEP 225 (226)
T ss_dssp CEEEEC
T ss_pred ceEEee
Confidence 999986
No 14
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.91 E-value=2e-24 Score=183.98 Aligned_cols=135 Identities=24% Similarity=0.218 Sum_probs=109.9
Q ss_pred cceechHHHHHHHHcCCeeEEcC-c--eEe-eCCC----ceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCC
Q 029969 15 LPVADLSVVAKTIKSGFVPVLHG-D--AVL-DDVQ----GCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPN 86 (184)
Q Consensus 15 v~~~~~~~I~~lL~~G~IPIv~g-d--~~~-~e~~----~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~ 86 (184)
++.++.+.|+.||++|+|||++| + .+. ++.+ ..+|+++|++|+++|.+|+||+|+|+|||||||+ ||++|+
T Consensus 171 i~~v~~~~i~~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~~p~ 249 (316)
T 2e9y_A 171 VSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLVILTDVPGVAV-NYGREG 249 (316)
T ss_dssp EEETTHHHHHHHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEE-TTTSTT
T ss_pred ceeehHHHHHHHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCCCCC
Confidence 45579999999999999999993 4 333 3332 2367899999999999999999999999999999 688899
Q ss_pred ceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCC-eEEEEcCCCcChh-hhhcCCcc
Q 029969 87 AVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI-DVYIVKAASSHSV-KALSGELR 164 (184)
Q Consensus 87 ~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi-~v~I~~g~~~~~l-~~l~Ge~~ 164 (184)
+++|++|+.+|+ +++.. .+.+.+|||.+|+++|..++++|+ +++|++ ++.+ ++|+| .
T Consensus 250 a~~i~~i~~~e~----------~~~~~------~g~~~~GgM~~Kv~aa~~a~~~gv~~v~I~~---~~~l~~~l~g-~- 308 (316)
T 2e9y_A 250 ERWLRRAAASEL----------KKYLR------EGHFPPGSMGPKVEAAISFVERTGKPAVIGS---LEEARQVLSL-Q- 308 (316)
T ss_dssp CEECSEEEHHHH----------HHHHH------TTCSCTTTHHHHHHHHHHHHHHHCSCEEEEE---STTHHHHHTT-S-
T ss_pred CcCCcEEcHHHH----------HHHHh------cCCCCCCCHHHHHHHHHHHHHcCCCeEEECc---HHHHHHHHcC-C-
Confidence 999999999763 33311 235678999999999999999999 699987 3445 78887 4
Q ss_pred cCCCCCccccEEEc
Q 029969 165 EKIPDDWLGTVIHF 178 (184)
Q Consensus 165 ~~~~~~~~GT~i~~ 178 (184)
.||+|.+
T Consensus 309 -------~GT~i~~ 315 (316)
T 2e9y_A 309 -------AGTVVML 315 (316)
T ss_dssp -------SSEEEEC
T ss_pred -------CCeEEec
Confidence 3999986
No 15
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.91 E-value=1.5e-24 Score=184.16 Aligned_cols=135 Identities=22% Similarity=0.300 Sum_probs=108.8
Q ss_pred cceechHHHHHHHHcCCeeEEcCc---eEe--eCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCcee
Q 029969 15 LPVADLSVVAKTIKSGFVPVLHGD---AVL--DDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVL 89 (184)
Q Consensus 15 v~~~~~~~I~~lL~~G~IPIv~gd---~~~--~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~l 89 (184)
++.++.+.|+.||++|+|||++|+ ++. +..+..+|+++|++|+++|.+|+||+|+|+|||||||+ ||.+|++++
T Consensus 167 i~~v~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~~~~a~~ 245 (310)
T 2we5_A 167 IDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCI-NYGKPDEKQ 245 (310)
T ss_dssp EEETTHHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSCSSCEE-STTSTTCEE
T ss_pred ceeehHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCCCCCCeE
Confidence 445899999999999999999943 331 11122568999999999999999999999999999999 678899999
Q ss_pred eeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCC--eEEEEcCCCcChh-hhhcCCcccC
Q 029969 90 LREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGI--DVYIVKAASSHSV-KALSGELREK 166 (184)
Q Consensus 90 i~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi--~v~I~~g~~~~~l-~~l~Ge~~~~ 166 (184)
|++|+..|+ +++.. .....+|||.+|+++|..++++|+ +++|++ ++.+ ++|+|+.
T Consensus 246 i~~i~~~e~----------~~~~~------~g~~~~GgM~~Kv~aa~~a~~~gv~~~v~I~~---~~~l~~~l~g~~--- 303 (310)
T 2we5_A 246 LTNVTVAEL----------EEYKQ------AGHFAPGSMLPKIEAAIQFVESQPNKQAIITS---LENLGSMSGDEI--- 303 (310)
T ss_dssp CCEEEHHHH----------HHHHH------TTCSCTTTTHHHHHHHHHHHHHSTTCEEEEEC---SGGGGGCBTTBC---
T ss_pred CCEEcHHHH----------HHHhh------CCCCCCCChHHHHHHHHHHHHcCCCceEEECc---HHHHHHHHcCCC---
Confidence 999999763 33311 123456999999999999999999 799996 3345 7889876
Q ss_pred CCCCccccEEE
Q 029969 167 IPDDWLGTVIH 177 (184)
Q Consensus 167 ~~~~~~GT~i~ 177 (184)
.||.|.
T Consensus 304 -----~GT~i~ 309 (310)
T 2we5_A 304 -----VGTVVT 309 (310)
T ss_dssp -----CSEEEE
T ss_pred -----CCeEEe
Confidence 399986
No 16
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.91 E-value=3.5e-24 Score=177.19 Aligned_cols=134 Identities=22% Similarity=0.309 Sum_probs=113.6
Q ss_pred CCCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeee
Q 029969 12 GGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLR 91 (184)
Q Consensus 12 ~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~ 91 (184)
.|+++.++.+.|+.+|++|+|||++|.++. +.+..+++++|++|+++|..|+|| |+|+|||||||++ ++++|+
T Consensus 122 ~g~~~~~~~~~i~~ll~~g~ipVi~~~g~~-~~g~~~~~~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~-----d~~~i~ 194 (258)
T 1gs5_A 122 VGLAQPGSPKLINSLLENGYLPVVSSIGVT-DEGQLMNVNADQAATALAATLGAD-LILLSDVSGILDG-----KGQRIA 194 (258)
T ss_dssp BEEEEECCCHHHHHHHHTTCEEEECSEEEC-TTSCEEECCHHHHHHHHHHHHTCE-EEEEESSSSCBCT-----TSCBCC
T ss_pred cCceeEECHHHHHHHHHCCCEEEEeCCcCC-CCCcEEEecHHHHHHHHHHHhCCc-EEEEeCCCceECC-----CCCCCc
Confidence 377888999999999999999999987663 333467999999999999999999 9999999999987 478999
Q ss_pred eeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHH-CCCeEEEEcCCCcChh-hhhcCCcccCCCC
Q 029969 92 EIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAK-LGIDVYIVKAASSHSV-KALSGELREKIPD 169 (184)
Q Consensus 92 ~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~-~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~ 169 (184)
+++++|+ .++. ...+.+|||.+|+.+|..+++ .+++++|+|++.|+.+ ++|+|+..
T Consensus 195 ~i~~~e~----------~~l~-------~~~~~~gGm~~k~~~a~~~~~~~~~~v~I~~~~~~~~l~~~~~~~~~----- 252 (258)
T 1gs5_A 195 EMTAAKA----------EQLI-------EQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPM----- 252 (258)
T ss_dssp EECHHHH----------HHHH-------HTTCSCTHHHHHHHHHHHHHHHHTSCEEEEESSCGGGHHHHHTTCCS-----
T ss_pred ccCHHHH----------HHHH-------hcCCCCCcHHHHHHHHHHHHHhCCCEEEEecCCCchHHHHHhcCCCC-----
Confidence 9999763 2221 135789999999999999876 4789999999999987 78999773
Q ss_pred CccccEEE
Q 029969 170 DWLGTVIH 177 (184)
Q Consensus 170 ~~~GT~i~ 177 (184)
||.|.
T Consensus 253 ---GT~i~ 257 (258)
T 1gs5_A 253 ---GTRIL 257 (258)
T ss_dssp ---SEEEC
T ss_pred ---cEEEe
Confidence 99985
No 17
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.90 E-value=1.3e-23 Score=176.46 Aligned_cols=115 Identities=22% Similarity=0.311 Sum_probs=100.0
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+|+++|.+.|+.+|++|+|||++|.++. +.+..+++++|++|+++|.+|+||+|+|||||||||+ ++++|++
T Consensus 155 G~i~~v~~~~i~~lL~~g~IPVi~~v~~~-~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~------d~~~I~~ 227 (279)
T 3l86_A 155 GDVTHINKRVIEEFLENRQIPILASLGYS-KEGDMLNINADYLATAVAVALAADKLILMTNVKGVLE------NGAVLEK 227 (279)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEEESEEEC-TTSCEEECCHHHHHHHHHHHTTCSEEEEECSSSSCEE------TTEECCE
T ss_pred cccchhhHHHHHHHHhCCcEEEECCcEEC-CCCCEeecCHHHHHHHHHHHcCCCEEEEEeCCCcccc------CCEehhh
Confidence 88999999999999999999999996664 3334678899999999999999999999999999995 4799999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAA 151 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~ 151 (184)
++.+|+ +++. .+.+++|||.+|+++|..|++.|++ ++|+++.
T Consensus 228 i~~~e~----------~~l~-------~~~~~tGGM~~Kl~aa~~a~~~Gv~~v~I~~~~ 270 (279)
T 3l86_A 228 ITSHQV----------QEKI-------DTAVITAGMIPKIESAAKTVAAGVGQVLIGDNL 270 (279)
T ss_dssp EEGGGS----------HHHH-------HTTSSCTTHHHHHHHHHHHHHTTCSEEEEESSS
T ss_pred ccHHHH----------HHHH-------hCCCCcCcHHHHHHHHHHHHHcCCCEEEEeccC
Confidence 999874 2221 1246899999999999999999998 9999875
No 18
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.90 E-value=7.9e-24 Score=179.82 Aligned_cols=137 Identities=20% Similarity=0.228 Sum_probs=111.0
Q ss_pred CCCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeee
Q 029969 12 GGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLR 91 (184)
Q Consensus 12 ~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~ 91 (184)
.|+|+++|++.|+.+|++|+|||++|+++.. .+..+++++|++|+++|.+|+||+|+|+|||+|||++ |++++|+
T Consensus 162 ~G~i~~v~~~~i~~lL~~g~IpVi~~~g~~~-~G~~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~----~~~~~i~ 236 (307)
T 3zzh_A 162 VGNIKSVTKEPIEASIKAGALPILTSLAETA-SGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIING----STGEKIS 236 (307)
T ss_dssp BEEEEEECCHHHHHHHHHTCEEEECCCEECT-TCBEEBCCHHHHHHHHHHHHCCSEEEEECSSCSCEET----TTTEECC
T ss_pred cccccccCHHHHHHHHHCCCEEEEeCCeECC-CCcEEecCHHHHHHHHHHhCCCCEEEEEeCCcceecC----CCCcCCc
Confidence 4999999999999999999999999998753 2346899999999999999999999999999999985 4689999
Q ss_pred eeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHH---CCCeEEEEcCCCcCh-h-hhhcCCcccC
Q 029969 92 EIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAK---LGIDVYIVKAASSHS-V-KALSGELREK 166 (184)
Q Consensus 92 ~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~---~gi~v~I~~g~~~~~-l-~~l~Ge~~~~ 166 (184)
+++..|. ++.+. ...+++|||.+||+++..|.+ .|.+++|.+ ++. + ++++++.
T Consensus 237 ~i~~~e~---------~~~l~-------~~~~~tGGM~~Kl~aa~~a~~~v~~g~~v~I~~---~~~ll~elft~~g--- 294 (307)
T 3zzh_A 237 MINLDEE---------YDDLM-------KQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQKELFTDSG--- 294 (307)
T ss_dssp EEEHHHH---------HHHHH-------TSTTSCHHHHHHHHHHHHHHHHSCTTCCEEEEC---GGGHHHHHHSCCC---
T ss_pred ccCHHHH---------HHHHH-------hCCCCCCcHHHHHHHHHHHHHHhccCeEEEEeC---ccHHHHHHhcCCC---
Confidence 9998641 23321 135689999999997555544 487899998 565 3 4677776
Q ss_pred CCCCccccEEEcCc
Q 029969 167 IPDDWLGTVIHFSR 180 (184)
Q Consensus 167 ~~~~~~GT~i~~~~ 180 (184)
.||.|.+.+
T Consensus 295 -----~GT~I~~~~ 303 (307)
T 3zzh_A 295 -----AGTMIRRGY 303 (307)
T ss_dssp -----CSEEEECCC
T ss_pred -----CcEEEecCC
Confidence 499999864
No 19
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.90 E-value=2.5e-23 Score=177.12 Aligned_cols=136 Identities=24% Similarity=0.294 Sum_probs=107.5
Q ss_pred cceechHHHHHHHHcCCeeEEcCc---eEeeCCC---c-eeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCc
Q 029969 15 LPVADLSVVAKTIKSGFVPVLHGD---AVLDDVQ---G-CAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNA 87 (184)
Q Consensus 15 v~~~~~~~I~~lL~~G~IPIv~gd---~~~~e~~---~-~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~ 87 (184)
++.++.+.|+.||++|+|||++|. .+..+.+ + .+++++|++|+++|..|+||+|+|+|||||||++|| +|++
T Consensus 171 i~~v~~~~i~~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~~p-~~~a 249 (314)
T 1e19_A 171 KGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYG-TEKE 249 (314)
T ss_dssp EEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTT-STTC
T ss_pred ceeehHHHHHHHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEEECCCC-CCCC
Confidence 556899999999999999999842 3332222 2 358999999999999999999999999999999888 6889
Q ss_pred eeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHC-CCeEEEEcCCCcChhhhhcCCcccC
Q 029969 88 VLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKL-GIDVYIVKAASSHSVKALSGELREK 166 (184)
Q Consensus 88 ~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~-gi~v~I~~g~~~~~l~~l~Ge~~~~ 166 (184)
++|++++.+|+ +++.. ...+.+|||.+|+++|..+++. +++++|+++. +..++|+|+
T Consensus 250 ~~i~~i~~~e~----------~~~~~------~g~~~~GgM~~Kv~aa~~~~~~~~~~v~I~~~~--~l~~~~~g~---- 307 (314)
T 1e19_A 250 QWLREVKVEEL----------RKYYE------EGHFKAGSMGPKVLAAIRFIEWGGERAIIAHLE--KAVEALEGK---- 307 (314)
T ss_dssp EECCEEEHHHH----------HHHHH------TTCSCTTTHHHHHHHHHHHHHHTCSEEEEEEGG--GHHHHHTTS----
T ss_pred eECCEECHHHH----------HHHHh------CCCcCCCChHHHHHHHHHHHHhCCCeEEEecHH--HHHHHHcCC----
Confidence 99999999763 33311 2357889999999999986664 5689999852 334788874
Q ss_pred CCCCccccEEEc
Q 029969 167 IPDDWLGTVIHF 178 (184)
Q Consensus 167 ~~~~~~GT~i~~ 178 (184)
.||+|.+
T Consensus 308 -----~GT~i~~ 314 (314)
T 1e19_A 308 -----TGTQVLP 314 (314)
T ss_dssp -----SSEEEEC
T ss_pred -----CCeEEcC
Confidence 2999975
No 20
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.90 E-value=2.5e-23 Score=184.18 Aligned_cols=135 Identities=17% Similarity=0.154 Sum_probs=114.1
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+++.+|.+.|+.+|++|.|||+++.+.. ..+..+++++|++|+++|.+|+||+|+|+|||||||++ ++++|++
T Consensus 168 g~v~~v~~~~i~~lL~~g~ipIi~~~~~~-~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~-----~~~~i~~ 241 (456)
T 3d2m_A 168 GVIRKTDTAALRFQLDAGNIVWMPPLGHS-YGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRP-----DGTLAET 241 (456)
T ss_dssp EEEEEECHHHHHHHHHTTCEEEECSEEEC-TTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCT-----TSCBCSE
T ss_pred eeEEEECHHHHHHHHHCCCeEEECCcccC-CCCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCC-----CCCcccc
Confidence 67889999999999999999999986653 33346889999999999999999999999999999986 6899999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe-EEEEcCCCcChh-h-hhcCCcccCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID-VYIVKAASSHSV-K-ALSGELREKIPD 169 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~-v~I~~g~~~~~l-~-~l~Ge~~~~~~~ 169 (184)
|+..|+ .++.. +.+|||.+|+++|..|++.|++ ++|++++.++.+ . +++|+.
T Consensus 242 i~~~e~----------~~~~~---------~g~ggm~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~------ 296 (456)
T 3d2m_A 242 LSAQEA----------QSLAE---------HAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG------ 296 (456)
T ss_dssp EEHHHH----------HHHHT---------TCCHHHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCSSC------
T ss_pred CCHHHH----------HHHHh---------ccCCChHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHhhcC------
Confidence 999763 23211 1239999999999999999996 999999999985 4 568776
Q ss_pred CccccEEEcCc
Q 029969 170 DWLGTVIHFSR 180 (184)
Q Consensus 170 ~~~GT~i~~~~ 180 (184)
.||.|.++.
T Consensus 297 --~GT~i~~~~ 305 (456)
T 3d2m_A 297 --IGTSIAKEA 305 (456)
T ss_dssp --SSEEEECCC
T ss_pred --Cceeeeccc
Confidence 399998753
No 21
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.90 E-value=1e-23 Score=176.50 Aligned_cols=134 Identities=17% Similarity=0.131 Sum_probs=112.3
Q ss_pred echHHHHHHHHcCCeeEEcCc-eEe-eCC-Cc-eeeechhHHHHHHHHhcCCCEEEEeecccceecCCCc---CCCceee
Q 029969 18 ADLSVVAKTIKSGFVPVLHGD-AVL-DDV-QG-CAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPT---EPNAVLL 90 (184)
Q Consensus 18 ~~~~~I~~lL~~G~IPIv~gd-~~~-~e~-~~-~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~---~p~~~li 90 (184)
.+.+.|+.+|++|+|||++|+ ++. ++. ++ .+++++|++|+++|..|+||+|+|+|||||||++||+ +|++++|
T Consensus 132 ~~~~~i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i 211 (276)
T 2ogx_A 132 TVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFL 211 (276)
T ss_dssp HHHHHHHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEE
T ss_pred ChHHHHHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEc
Confidence 467889999999999999984 343 122 12 3789999999999999999999999999999999994 7899999
Q ss_pred eeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCC
Q 029969 91 REIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPD 169 (184)
Q Consensus 91 ~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~ 169 (184)
++|++.| +.++ ..+|||.+|+.++..+++.|++++|+|++.++.+ ++|+|+.
T Consensus 212 ~~i~~~e----------~~~~-----------~g~ggM~~K~~~~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~------ 264 (276)
T 2ogx_A 212 PETSATD----------LAKS-----------EGPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEH------ 264 (276)
T ss_dssp SEEEHHH----------HHTS-----------CSCCSSCHHHHHHHHTCSSCCEEEEEETTSTTHHHHHHTTCC------
T ss_pred ceeCHHH----------HHHH-----------hCcCChHHHHHHHHHHhcCCCeEEEEECCCccHHHHHHcCCC------
Confidence 9999965 3333 1588999999888877777889999999999986 7899877
Q ss_pred CccccEEEcCc
Q 029969 170 DWLGTVIHFSR 180 (184)
Q Consensus 170 ~~~GT~i~~~~ 180 (184)
.||.|.++.
T Consensus 265 --~GT~i~~~~ 273 (276)
T 2ogx_A 265 --VGTLIRTGV 273 (276)
T ss_dssp --CSEEEECSC
T ss_pred --CceEEccCC
Confidence 399998764
No 22
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.89 E-value=3e-23 Score=176.22 Aligned_cols=135 Identities=23% Similarity=0.333 Sum_probs=106.2
Q ss_pred ceechHHHHHHHHcCCeeEEc-CceE--eeCC---C-ceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCce
Q 029969 16 PVADLSVVAKTIKSGFVPVLH-GDAV--LDDV---Q-GCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAV 88 (184)
Q Consensus 16 ~~~~~~~I~~lL~~G~IPIv~-gd~~--~~e~---~-~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~ 88 (184)
+.+|.+.|+.||++|+|||++ |.++ ..+. . ..+++++|++|+++|.+|+||+|||||||||||+ ||++|+++
T Consensus 174 ~iVe~~~I~~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~-dp~~p~a~ 252 (317)
T 3kzf_A 174 EIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI-NYKKPDER 252 (317)
T ss_dssp EETTHHHHHHHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSSCEE-SSSCSSCE
T ss_pred ceECHHHHHHHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCeeeC-CCCCCCCe
Confidence 368899999999999998888 3333 2221 1 2358999999999999999999999999999999 78889999
Q ss_pred eeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCC-CeEEEEcCCCcChh-hhhcCCcccC
Q 029969 89 LLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLG-IDVYIVKAASSHSV-KALSGELREK 166 (184)
Q Consensus 89 li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~g-i~v~I~~g~~~~~l-~~l~Ge~~~~ 166 (184)
+|++++.+| ++.+.. .+.+.+|||.+|+++|..+++.| .+++|++++ .+ ++|+|+.
T Consensus 253 ~I~~it~~e----------~~~li~------~g~~~~GGM~pKl~AA~~av~~gg~~v~I~s~~---~l~~~l~G~~--- 310 (317)
T 3kzf_A 253 KLEEIKLSE----------ILALEK------DGHFAAGSMGPKVRAAIEFTQATGKMSIITSLS---TAVDALNGKC--- 310 (317)
T ss_dssp ECCEEEHHH----------HHHHHT------TTSCC--CCHHHHHHHHHHHHHHCCCEEECCGG---GHHHHHTTSS---
T ss_pred ECcCcCHHH----------HHHHHh------cCCCCCCCHHHHHHHHHHHHHcCCCeEEEcchH---HHHHHHCCCC---
Confidence 999999976 333321 23567899999999999998755 569999863 34 7899863
Q ss_pred CCCCccccEEEcC
Q 029969 167 IPDDWLGTVIHFS 179 (184)
Q Consensus 167 ~~~~~~GT~i~~~ 179 (184)
||+|.++
T Consensus 311 ------GT~I~~d 317 (317)
T 3kzf_A 311 ------GTRIIKD 317 (317)
T ss_dssp ------SEEEECC
T ss_pred ------CeEEecC
Confidence 9999874
No 23
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.89 E-value=3.1e-23 Score=173.03 Aligned_cols=138 Identities=22% Similarity=0.183 Sum_probs=111.0
Q ss_pred CcceechHHHHHHHHcCCeeEEcCc-eEe-eCC----CceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCC
Q 029969 14 NLPVADLSVVAKTIKSGFVPVLHGD-AVL-DDV----QGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPN 86 (184)
Q Consensus 14 ~v~~~~~~~I~~lL~~G~IPIv~gd-~~~-~e~----~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~ 86 (184)
.+...|...|+.+|++|+|||++|. ++. .+. ....++++|++|+++|..++||+|+|+|||||||++|| ++|+
T Consensus 125 ~vt~~d~~~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~ 204 (270)
T 2ogx_B 125 VVGGAGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKD 204 (270)
T ss_dssp BCCSSTTCHHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTT
T ss_pred eecHhhHHHHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCC
Confidence 3556788899999999999999975 333 121 12457999999999999999999999999999999999 7899
Q ss_pred ceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCccc
Q 029969 87 AVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELRE 165 (184)
Q Consensus 87 ~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~ 165 (184)
+++|++++++| +.++.. ......|||.+|+++|. .+++++|+|++.++.+ ++|+|+.
T Consensus 205 a~~i~~i~~~e----------~~~~~~------~g~~~~ggm~~kl~aa~----~~~~v~I~~g~~~~~l~~~l~g~~-- 262 (270)
T 2ogx_B 205 ATFIPRISVDE----------MKAKGL------HDSILEFPVLDLLQSAQ----HVREVQVVNGLVPGNLTRALAGEH-- 262 (270)
T ss_dssp CCEESEEEHHH----------HHHTTC------CCTTSCHHHHHHHHHCS----SCCEEEEEETTSTTHHHHHHTTCC--
T ss_pred CeEcceeCHHH----------HHHHhc------CCCcccHHHHHHHHHhh----cCCcEEEEeCCCchHHHHHHcCCC--
Confidence 99999999976 333321 01134489999999875 3569999999999987 6899987
Q ss_pred CCCCCccccEEEcC
Q 029969 166 KIPDDWLGTVIHFS 179 (184)
Q Consensus 166 ~~~~~~~GT~i~~~ 179 (184)
.||+|.++
T Consensus 263 ------~GT~i~~~ 270 (270)
T 2ogx_B 263 ------VGTIITAS 270 (270)
T ss_dssp ------CSEEEECC
T ss_pred ------CCeEecCC
Confidence 39999863
No 24
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=99.89 E-value=8.4e-23 Score=168.21 Aligned_cols=124 Identities=17% Similarity=0.195 Sum_probs=106.3
Q ss_pred eechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeec
Q 029969 17 VADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 17 ~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~ 95 (184)
..+.+.+..+|++|+|||++|. .|..++++|++|+++|.+|+||+|+++|||||||++|| .+|++++++++++
T Consensus 116 ~~~~~~~~~lL~~g~IpVv~~~------~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~ 189 (243)
T 3ek6_A 116 DFIRRRAIRHLEKGRIAIFAAG------TGNPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTY 189 (243)
T ss_dssp ECCHHHHHHHHHTTCEEEEEST------TSSTTCCHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECH
T ss_pred cCCHHHHHHHHHCCcEEEEECC------CCCCcCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccH
Confidence 4567889999999999999972 23346999999999999999999999999999999999 6899999999999
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcccc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGT 174 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT 174 (184)
.|+ ++ . ..++| |++++..|.+.|++++|+|++.++.+ ++|+|+.. ||
T Consensus 190 ~e~---------~~-~------------g~~~~--~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~--------GT 237 (243)
T 3ek6_A 190 DEV---------IM-Q------------GLEVM--DTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQI--------GT 237 (243)
T ss_dssp HHH---------HH-H------------TCCSS--CHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCC--------SE
T ss_pred HHH---------Hh-C------------CchhH--HHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCC--------ce
Confidence 763 21 1 12344 78999999999999999999999986 78999874 99
Q ss_pred EEEc
Q 029969 175 VIHF 178 (184)
Q Consensus 175 ~i~~ 178 (184)
+|.+
T Consensus 238 ~i~~ 241 (243)
T 3ek6_A 238 LVQG 241 (243)
T ss_dssp EECC
T ss_pred EEee
Confidence 9987
No 25
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=99.88 E-value=1.1e-22 Score=167.82 Aligned_cols=123 Identities=20% Similarity=0.287 Sum_probs=104.9
Q ss_pred echHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEee-cccceecCCC-cCCCceeeeeeec
Q 029969 18 ADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLT-DVLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 18 ~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~lt-dVdGVy~~dp-~~p~~~li~~I~~ 95 (184)
++.+. +.+|++|+|||++|. .+..++++|++|+++|..|+||+|+|+| ||||||++|| .+|++++|++|+.
T Consensus 116 ~~~~~-~~lL~~g~IpVi~~~------~g~~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~ 188 (252)
T 1z9d_A 116 IRGRA-LRHLEKNRIVVFGAG------IGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTH 188 (252)
T ss_dssp CHHHH-HHHHHTTCEEEEEST------TSCTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEH
T ss_pred hHHHH-HHHHhCCCEEEEeCC------cCCCCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecH
Confidence 34444 899999999999971 1334899999999999999999999999 9999999999 7899999999998
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcccc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGT 174 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT 174 (184)
.|+ .. ...++| |++++..|.+.|++++|+|++.++.+ ++|+|+. .||
T Consensus 189 ~e~----------~~------------~~~~~m--k~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~--------~GT 236 (252)
T 1z9d_A 189 GEV----------IK------------RGLKIM--DATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEH--------IGT 236 (252)
T ss_dssp HHH----------HT------------TTCCCS--CHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCC--------CSE
T ss_pred HHH----------Hh------------cccccc--CHHHHHHHHHcCCeEEEEeCCCchHHHHHHcCCC--------Cce
Confidence 763 21 133688 89999999999999999999999987 7899977 399
Q ss_pred EEEcC
Q 029969 175 VIHFS 179 (184)
Q Consensus 175 ~i~~~ 179 (184)
+|.++
T Consensus 237 ~i~~~ 241 (252)
T 1z9d_A 237 TVSNK 241 (252)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99874
No 26
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.88 E-value=5.8e-23 Score=182.81 Aligned_cols=137 Identities=20% Similarity=0.219 Sum_probs=114.2
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+|+++|++.|+.+|++|.|||+++.+.. +.+..+++++|++|+.+|.+|+||+|+|+|||+|||++ ++++|++
T Consensus 173 G~I~~v~~~~i~~lL~~g~IpVi~p~g~~-~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~-----~~~lI~~ 246 (460)
T 3s6g_A 173 GEPRHIHLDLVGSAARAGQAAILACLGET-PDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDE-----DGDILSS 246 (460)
T ss_dssp EEEEEECCHHHHHHHHTTCEEEEECEEEC-TTCCEEEECHHHHHHHHHHHHCCSEEEEECSSCSCBCT-----TSSBCCE
T ss_pred CcceEEcHHHHHHHHHCCcEEEEECceEC-CCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCccccCC-----CCeecce
Confidence 89999999999999999999999987663 33346799999999999999999999999999999985 5889999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh--hhhcCCcccCCCCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV--KALSGELREKIPDD 170 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l--~~l~Ge~~~~~~~~ 170 (184)
|+..+ +++.+. ...+++|||.+||++|..+.+.+.+++|++++.++.+ ++++++.
T Consensus 247 i~~~~---------e~~~l~-------~~~~~tGGM~~Kl~aa~~a~~gv~~v~iv~g~~~~~Ll~eLft~~g------- 303 (460)
T 3s6g_A 247 INLAT---------DFGDLM-------QADWVNGGMRLKLEEIKRLLDDLPLSSSVSITRPSELARELFTHAG------- 303 (460)
T ss_dssp EEHHH---------HHHHHH-------HCSSSCHHHHHHHHHHHHHHHTSCTTCEEEEECGGGHHHHHHSSCC-------
T ss_pred eCcHH---------HHHHHH-------hcCCCCCcHHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHhcCCC-------
Confidence 99852 133332 1357899999999999999884446999999999975 4677776
Q ss_pred ccccEEEcC
Q 029969 171 WLGTVIHFS 179 (184)
Q Consensus 171 ~~GT~i~~~ 179 (184)
.||.|.++
T Consensus 304 -~GT~i~~~ 311 (460)
T 3s6g_A 304 -SGTLIRRG 311 (460)
T ss_dssp -SSEEEECC
T ss_pred -CceEEEcC
Confidence 49999987
No 27
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=99.88 E-value=1.5e-23 Score=172.51 Aligned_cols=130 Identities=24% Similarity=0.366 Sum_probs=101.3
Q ss_pred eechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeec
Q 029969 17 VADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 17 ~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~ 95 (184)
.++.+.+..+|++|+|||++| + . .+.++|++|+++|..|+||+|+|+|||||||++|| ++|++++|++|++
T Consensus 112 ~~~~~~i~~lL~~g~IpVi~g-g----~---~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~ 183 (244)
T 2brx_A 112 VEDFWEAWKAVQLKKIPVMGG-T----H---PGHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKP 183 (244)
T ss_dssp BCSHHHHHHHHHTTCBCEECC-C----S---TTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECH
T ss_pred cCCHHHHHHHHhCCCEEEEcC-C----C---CCCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECH
Confidence 567889999999999999998 1 1 24489999999999999999999999999999999 7899999999999
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHH-CCCeEEEEcCCCcChh-hhhcCCcccCCCCCccc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAK-LGIDVYIVKAASSHSV-KALSGELREKIPDDWLG 173 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~-~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~G 173 (184)
.|+ .++.. .....+|||..|..+|.++++ .+++++|+|++.++.+ ++|+|+.. |
T Consensus 184 ~e~----------~~~~~------~~g~~~g~m~~~~~~A~~~~~~~~~~v~I~ng~~~~~l~~~l~g~~~--------G 239 (244)
T 2brx_A 184 EEL----------LEIVG------KGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHN--------G 239 (244)
T ss_dssp HHH----------HHHHH------C--------CCSCHHHHHHHHHHTCCEEEECHHHHTCHHHHHTTCSS--------S
T ss_pred HHH----------HHHHh------ccCCCCCCCcchHHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCC--------c
Confidence 763 22211 113457888877777766554 6788999999999987 68999773 9
Q ss_pred cEEEc
Q 029969 174 TVIHF 178 (184)
Q Consensus 174 T~i~~ 178 (184)
|+|.+
T Consensus 240 T~i~~ 244 (244)
T 2brx_A 240 TTIEP 244 (244)
T ss_dssp EEECC
T ss_pred eEecC
Confidence 99974
No 28
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.88 E-value=1.1e-22 Score=168.32 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=96.8
Q ss_pred echHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeec-ccceecCCC-cCCCceeeeeeec
Q 029969 18 ADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTD-VLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 18 ~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltd-VdGVy~~dp-~~p~~~li~~I~~ 95 (184)
++.+. ..+|++|+|||++|. .|..++++|++|+++|..|+||+|+|+|| |||||++|| ++|++++|++|++
T Consensus 132 ~~~~~-~~lL~~g~IpVi~~~------~g~~~~~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~ 204 (256)
T 2va1_A 132 SANNI-KKAIEKEQVMIFVAG------TGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITF 204 (256)
T ss_dssp CHHHH-HHHHHTTCEEEEEST------TSSSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEH
T ss_pred hHHHH-HHHHhCCcEEEEECC------CCCCCCChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcH
Confidence 34455 789999999999971 23346889999999999999999999999 999999999 7899999999999
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcccc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGT 174 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT 174 (184)
.|+ ..+ ..|+| |+++|..|.+.|++++|+|++.++.+ ++|+|+. .||
T Consensus 205 ~e~----------~~~------------~~~~m--k~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~--------~GT 252 (256)
T 2va1_A 205 NMA----------LTQ------------NLKVM--DATALALCQENNINLLVFNIDKPNAIVDVLEKKN--------KYT 252 (256)
T ss_dssp HHH----------HHH------------TCCSS--CHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCS--------CEE
T ss_pred HHH----------HHh------------ccCCc--cHHHHHHHHHCCCeEEEEeCCCchHHHHHHcCCC--------CeE
Confidence 763 221 12788 99999999999999999999999986 7899977 399
Q ss_pred EEE
Q 029969 175 VIH 177 (184)
Q Consensus 175 ~i~ 177 (184)
+|.
T Consensus 253 ~i~ 255 (256)
T 2va1_A 253 IVS 255 (256)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 29
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.88 E-value=1.9e-22 Score=179.55 Aligned_cols=135 Identities=20% Similarity=0.244 Sum_probs=110.6
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeeee
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLRE 92 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~~ 92 (184)
|+|+++|++.|+.+|++|+|||++|+++.. .+..+++++|++|+.+|.+|+||+|+|+|||+|||++ |++++|++
T Consensus 163 G~I~~v~~~~I~~lL~~G~IPVi~~~g~~~-~G~~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~----~~~~lI~~ 237 (464)
T 4ab7_A 163 GNIKSVTKEPIEASIKAGALPILTSLAETA-SGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIING----STGEKISM 237 (464)
T ss_dssp EEEEEECCHHHHHHHHTTCEEEEESEEECT-TCBEEECCHHHHHHHHHHHHCCSEEEEEESSCSEECT----TTCCEECE
T ss_pred CcccccCHHHHHHHHHCCcEEEEcCCcCCC-CCCEEEecHHHHHHHHHHHcCCCEEEEEecccccccC----CCCcCCcc
Confidence 899999999999999999999999987742 3346899999999999999999999999999999985 46899999
Q ss_pred eeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHH---CCCeEEEEcCCCcCh-h-hhhcCCcccCC
Q 029969 93 IAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAK---LGIDVYIVKAASSHS-V-KALSGELREKI 167 (184)
Q Consensus 93 I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~---~gi~v~I~~g~~~~~-l-~~l~Ge~~~~~ 167 (184)
|+..|. ++.+. ...+++|||.+||+++..|++ .|..++|++ ++. + ++++++.
T Consensus 238 it~~e~---------~~~li-------~~~~~tgGM~pKl~aa~aa~~~v~~g~~v~I~~---~~~ll~eLft~~g---- 294 (464)
T 4ab7_A 238 INLDEE---------YDDLM-------KQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQKELFTDSG---- 294 (464)
T ss_dssp EEHHHH---------HHHHH-------TCSSCCHHHHHHHHHHHHHHTTSCTTCEEEEEE---STTHHHHTTSSST----
T ss_pred cCHHHH---------HHHHH-------hcCCCCCcHHHHHHHHHHHHHhcccCcEEEEec---ChHHHHHHhcCCC----
Confidence 998642 23221 235789999999997666655 377899998 444 4 5677776
Q ss_pred CCCccccEEEcC
Q 029969 168 PDDWLGTVIHFS 179 (184)
Q Consensus 168 ~~~~~GT~i~~~ 179 (184)
.||.|.++
T Consensus 295 ----~GT~I~~~ 302 (464)
T 4ab7_A 295 ----AGTMIRRG 302 (464)
T ss_dssp ----TSEEEECC
T ss_pred ----CceEEecC
Confidence 49999987
No 30
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=99.88 E-value=1.3e-22 Score=166.76 Aligned_cols=124 Identities=12% Similarity=0.165 Sum_probs=105.6
Q ss_pred eechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeec
Q 029969 17 VADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 17 ~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~ 95 (184)
..|.+.+..+|++|+|||++|. .+..++++|++|+++|.+|+||+|+|+|||||||++|| .+|++++++++++
T Consensus 115 ~~~~~~i~~lL~~g~ipVi~~~------~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~ 188 (240)
T 4a7w_A 115 SYIYRKAIRHLEKGRVVIFGAG------TGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSY 188 (240)
T ss_dssp ECCHHHHHHHHHTTCEEEEEST------TSCTTSCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECH
T ss_pred cCcHHHHHHHHHCCCEEEEeCC------CCCCCCChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecH
Confidence 4688999999999999999972 12247999999999999999999999999999999999 6899999999998
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcccc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGT 174 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT 174 (184)
.|+ + .. ..++| |++++..|+++|++++|+|++.|+.+ ++|.|+.- .||
T Consensus 189 ~e~---------~-~~------------g~~~m--~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~g-------~GT 237 (240)
T 4a7w_A 189 NDA---------L-IG------------DIEVM--DDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQG-------VFS 237 (240)
T ss_dssp HHH---------H-HS------------SCCSS--CHHHHHHHHHTTCCEEEEESSSTTHHHHHHHHSCS-------SCE
T ss_pred HHH---------H-hc------------Ccccc--HHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCC-------Cce
Confidence 653 2 11 34677 68999999999999999999999986 78888642 499
Q ss_pred EEE
Q 029969 175 VIH 177 (184)
Q Consensus 175 ~i~ 177 (184)
.|.
T Consensus 238 ~i~ 240 (240)
T 4a7w_A 238 MVK 240 (240)
T ss_dssp EEC
T ss_pred eeC
Confidence 874
No 31
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=99.88 E-value=5.8e-23 Score=165.85 Aligned_cols=129 Identities=26% Similarity=0.299 Sum_probs=101.3
Q ss_pred ceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeee
Q 029969 16 PVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIA 94 (184)
Q Consensus 16 ~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~ 94 (184)
..++.+.|+.+|++|+|||++| + ..+.++|++|+++|..|+||+|+|+|||||||++|| .+|++++|++++
T Consensus 88 ~~~~~~~i~~ll~~g~ipVi~~-g-------~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~ 159 (219)
T 2ij9_A 88 VPVDFMEAEELSKLYRVVVMGG-T-------FPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLS 159 (219)
T ss_dssp CCSSHHHHHHHHTTCSEEEECC-C-------SSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEEC
T ss_pred CcCCHHHHHHHHHCCCEEEEeC-C-------CCCCCchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeC
Confidence 3578899999999999999998 1 123499999999999999999999999999999999 689999999999
Q ss_pred ccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHH-HHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcc
Q 029969 95 VGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAM-IAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWL 172 (184)
Q Consensus 95 ~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~-a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~ 172 (184)
+.|+ .++.. .....+|||..|..+|.+ +.+.+++++|+|+ .++.+ ++|+|+..
T Consensus 160 ~~e~----------~~~~~------~~g~~~g~~~~~~~~a~~~~~~~~~~v~I~~g-~~~~l~~~~~g~~~-------- 214 (219)
T 2ij9_A 160 PQQL----------VEIVS------RSSAKAGTNVVIDLLAAKIIERSKIKTYVILG-TPENIMKAVKGEAV-------- 214 (219)
T ss_dssp HHHH----------HHHTC------C-----CCCCCSCHHHHHHHHHHTCCEEEEEC-CHHHHHHHHTTCCC--------
T ss_pred HHHH----------HHHHh------cCCCCCCCccchHHHHHHHHHHCCCeEEEEEC-CHhHHHHHHcCCCC--------
Confidence 9763 33211 112347777666666655 4556789999999 99987 68999773
Q ss_pred ccEEE
Q 029969 173 GTVIH 177 (184)
Q Consensus 173 GT~i~ 177 (184)
||.|.
T Consensus 215 GT~i~ 219 (219)
T 2ij9_A 215 GTVIA 219 (219)
T ss_dssp SEEEC
T ss_pred CeEeC
Confidence 99984
No 32
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=99.88 E-value=1.9e-22 Score=164.65 Aligned_cols=121 Identities=21% Similarity=0.322 Sum_probs=102.4
Q ss_pred chHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeeccC
Q 029969 19 DLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAVGE 97 (184)
Q Consensus 19 ~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~~e 97 (184)
+.+.+ .+|+.|.|||+++. .+..++++|++|+++|..|+||+|+|+|||||||++|| .+|++++|+++++.|
T Consensus 117 ~~~~~-~ll~~g~ipVv~g~------~g~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e 189 (239)
T 1ybd_A 117 RPKAI-QYLEEGKVVIFAAG------TGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDE 189 (239)
T ss_dssp HHHHH-HHHHTTCEEEEEST------TSSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHH
T ss_pred HHHHH-HHHhCCcEEEEECC------ccCCCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHH
Confidence 45666 89999999999841 12246899999999999999999999999999999999 689999999999976
Q ss_pred CCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCccccEE
Q 029969 98 DGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGTVI 176 (184)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT~i 176 (184)
+ ..+ ..++| |++++..|.+.|++++|+|++.|+.+ ++|+|+.. ||+|
T Consensus 190 ~----------~~~------------g~~~m--~~~a~~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~--------GT~i 237 (239)
T 1ybd_A 190 A----------LLK------------NLKVM--DATAFALCRERKLNIVVFGIAKEGSLKRVITGEDE--------GTLV 237 (239)
T ss_dssp H----------HHT------------TCCSS--CHHHHHHHHHTTCCEEEECTTSTTHHHHHHHTCSC--------SEEE
T ss_pred H----------HHh------------ccccc--CHHHHHHHHHcCCcEEEEeCCChhHHHHHHcCCCC--------CeEE
Confidence 3 211 23677 78899999999999999999999986 78999873 9999
Q ss_pred Ec
Q 029969 177 HF 178 (184)
Q Consensus 177 ~~ 178 (184)
.+
T Consensus 238 ~~ 239 (239)
T 1ybd_A 238 HC 239 (239)
T ss_dssp EC
T ss_pred cC
Confidence 75
No 33
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=99.87 E-value=2.7e-22 Score=164.95 Aligned_cols=124 Identities=19% Similarity=0.259 Sum_probs=98.3
Q ss_pred chHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeeccC
Q 029969 19 DLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAVGE 97 (184)
Q Consensus 19 ~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~~e 97 (184)
+.+ ++.+|++|.|||++|. . +..++++|++|+++|..|+||+|+|+|||||||++|| .+|++++|+++++.|
T Consensus 118 ~~~-~~~ll~~g~ipVi~~~---~---g~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e 190 (247)
T 2a1f_A 118 WSE-AIKMLREKRVVIFSAG---T---GNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAE 190 (247)
T ss_dssp HHH-HHHHHHTTCEEEEEST---T---SCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHH
T ss_pred HHH-HHHHHhCCCEEEEeCC---c---CCCCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHH
Confidence 444 4899999999999971 1 2346999999999999999999999999999999999 789999999999876
Q ss_pred CCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCccccEE
Q 029969 98 DGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGTVI 176 (184)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT~i 176 (184)
+ ..+ ..++| |++++..|.+.|++++|+|++.++.+ ++|+|+.+ ||+|
T Consensus 191 ~----------~~~------------g~~~m--~~~aa~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~--------GT~~ 238 (247)
T 2a1f_A 191 V----------IDK------------ELKVM--DLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEE--------GTTI 238 (247)
T ss_dssp H----------HHT------------TCCSS--CHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCS--------SEEE
T ss_pred H----------HHc------------Ccccc--CHHHHHHHHHcCCcEEEEeCCCchHHHHHHcCCCC--------ceEE
Confidence 3 211 23677 78899999999999999999999986 78999874 9999
Q ss_pred EcCcc
Q 029969 177 HFSRE 181 (184)
Q Consensus 177 ~~~~~ 181 (184)
....+
T Consensus 239 ~~~~~ 243 (247)
T 2a1f_A 239 CEGHH 243 (247)
T ss_dssp CCC--
T ss_pred eeccc
Confidence 87644
No 34
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=99.87 E-value=1.5e-22 Score=170.16 Aligned_cols=121 Identities=23% Similarity=0.367 Sum_probs=99.9
Q ss_pred echHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeecc
Q 029969 18 ADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAVG 96 (184)
Q Consensus 18 ~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~~ 96 (184)
++.+.+ .+|++|+|||+++. .+..++++|++|+++|.+|+||+|+++|||||||++|| .+|++++|+++++.
T Consensus 158 ~~~~~l-~lL~~g~IpVv~g~------~g~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~ 230 (281)
T 3nwy_A 158 LPLRAV-RHLEKGRVVIFGAG------MGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHR 230 (281)
T ss_dssp CHHHHH-HHHHTTCEEEEEST------TSSTTCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHH
T ss_pred chHHHH-HHHHcCCeEEEECC------CCCCCCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHH
Confidence 456666 79999999999971 23346999999999999999999999999999999999 79999999999986
Q ss_pred CCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCccccE
Q 029969 97 EDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGTV 175 (184)
Q Consensus 97 e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT~ 175 (184)
|+ ++ .|+|..|++++..|++.|++++|+|++.++++ ++|+|+.. ||+
T Consensus 231 e~---------~~---------------~g~~v~k~~Aa~~a~~~Gi~v~I~~g~~p~~l~~~l~Ge~~--------GT~ 278 (281)
T 3nwy_A 231 EV---------LD---------------RGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKI--------GTL 278 (281)
T ss_dssp HH---------HT---------------TTCCSSCHHHHHHHHTTTCCEEEEETTSTTHHHHHHHTCCC--------SEE
T ss_pred HH---------HH---------------cCCCcHHHHHHHHHHHCCCeEEEecCCCchHHHHHHcCCCC--------ceE
Confidence 52 21 13566799999999999999999999999986 78999874 999
Q ss_pred EE
Q 029969 176 IH 177 (184)
Q Consensus 176 i~ 177 (184)
|.
T Consensus 279 i~ 280 (281)
T 3nwy_A 279 VT 280 (281)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 35
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=99.86 E-value=1.3e-22 Score=180.77 Aligned_cols=138 Identities=17% Similarity=0.238 Sum_probs=113.4
Q ss_pred CCCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCceeee
Q 029969 12 GGNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNAVLLR 91 (184)
Q Consensus 12 ~g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~~li~ 91 (184)
.|+|+++|.+.|+.+|++|+|||+++.+.. ..+..+++++|++|+.+|.+|+||+|+|+|||+|||++ ++++|+
T Consensus 175 ~G~I~~v~~~~i~~lL~~g~IpVi~pvg~~-~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~-----~~~lI~ 248 (467)
T 3s6k_A 175 VGEVKAVNLAPIEASLQAGSIPVITSLGET-PSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDA-----EGKLID 248 (467)
T ss_dssp BBCCCCBCCHHHHTHHHHTCBCCCCSCCCC-SSSCCCBCCHHHHHHHHHHHHCCSSCCCCCSSCSCCCS-----SCCCCC
T ss_pred cceEEEEcHHHHHHHHHCCCEEEEECceEC-CCCcEEecCHHHHHHHHHHhcCCCEEEEEecccceeCC-----CCCCcc
Confidence 399999999999999999999999965553 22346789999999999999999999999999999985 578999
Q ss_pred eeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh--hhhcCCcccCCCC
Q 029969 92 EIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV--KALSGELREKIPD 169 (184)
Q Consensus 92 ~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l--~~l~Ge~~~~~~~ 169 (184)
+++..+. ++.+. ...+++|||.+||++|..+.+.+.++++++++.++.+ +++.++.
T Consensus 249 ~i~~~~e---------~~~l~-------~~~~~tGGM~~Kl~aa~~a~~gv~~~~iv~g~~~~~Ll~eLft~~g------ 306 (467)
T 3s6k_A 249 SINLSTE---------YDHLM-------QQPWINGGMRVKIEQIKDLLDRLPLESSVSITRPADLAKELFTHKG------ 306 (467)
T ss_dssp CCCTTTT---------THHHH-------TSSSCCSHHHHHHHHHHHHHTTSCSSCCBCCCCTTTHHHHHHSSCT------
T ss_pred ccChHHH---------HHHHH-------hcCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCchHHHHHHhcCCC------
Confidence 9998632 22221 1346899999999999998874446999999999975 4577776
Q ss_pred CccccEEEcC
Q 029969 170 DWLGTVIHFS 179 (184)
Q Consensus 170 ~~~GT~i~~~ 179 (184)
.||.|.++
T Consensus 307 --~GT~i~~~ 314 (467)
T 3s6k_A 307 --SGTLVRRG 314 (467)
T ss_dssp --TSCCBCCC
T ss_pred --cceEEeCC
Confidence 39999887
No 36
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=99.86 E-value=2.2e-21 Score=160.43 Aligned_cols=124 Identities=15% Similarity=0.239 Sum_probs=101.1
Q ss_pred echHHHHHHHHcCCeeEEcCceEeeCCCceeeechhHHHHHHHHhcCCCEEEEee-cccceecCCC-cCCCceeeeeeec
Q 029969 18 ADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAILSGDVIIRHLAAYMKPDYVVFLT-DVLGVYSHPP-TEPNAVLLREIAV 95 (184)
Q Consensus 18 ~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s~D~iA~~lA~~l~Ad~li~lt-dVdGVy~~dp-~~p~~~li~~I~~ 95 (184)
.+...+..+|++|+|||++|. .+..++++|++|+++|..|+||+|+|+| ||||||++|| .+|++++|++|++
T Consensus 121 ~~~~~~~~lL~~g~IpVi~gg------~g~~~vttD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~ 194 (255)
T 2jjx_A 121 YIRLRAVHHLDNGYIVIFGGG------NGQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNY 194 (255)
T ss_dssp CCHHHHHHHHHTTCEEEEEST------TSCSSCCSHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEH
T ss_pred ccHHHHHHHHhCCcEEEEeCC------CCCCccchHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecH
Confidence 355555599999999999972 1234688999999999999999999999 9999999999 7899999999998
Q ss_pred cCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChh-hhhcCCcccCCCCCcccc
Q 029969 96 GEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSV-KALSGELREKIPDDWLGT 174 (184)
Q Consensus 96 ~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l-~~l~Ge~~~~~~~~~~GT 174 (184)
+| +.++ .+|+|.+ .++..+.+.|++++|+|++.|+.+ ++|+|+. .||
T Consensus 195 ~e----------~~~~------------G~~~m~~--~a~~~a~~~gi~v~I~~~~~~~~l~~~l~g~~--------~GT 242 (255)
T 2jjx_A 195 ND----------VVRQ------------NIQVMDQ--AALLLARDYNLPAHVFNFDEPGVMRRICLGEH--------VGT 242 (255)
T ss_dssp HH----------HHHT------------TCCSSCH--HHHHHHHHHTCCEEEEETTSTTHHHHHHBTCC--------CSE
T ss_pred HH----------HHHc------------CCccCHH--HHHHHHHHcCCeEEEEeCCCchHHHHHhcCCC--------Cce
Confidence 65 2221 3478864 455555668999999999999986 7899976 399
Q ss_pred EEEcC
Q 029969 175 VIHFS 179 (184)
Q Consensus 175 ~i~~~ 179 (184)
+|.++
T Consensus 243 ~I~~~ 247 (255)
T 2jjx_A 243 LINDD 247 (255)
T ss_dssp EEESS
T ss_pred EEecC
Confidence 99984
No 37
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.85 E-value=7.6e-21 Score=162.94 Aligned_cols=135 Identities=23% Similarity=0.306 Sum_probs=103.8
Q ss_pred cceechHHHHHHHHcCCeeEEcC-ceE--eeCC---Cc-eeeechhHHHHHHHHhcCCCEEEEeecccceecCCCcCCCc
Q 029969 15 LPVADLSVVAKTIKSGFVPVLHG-DAV--LDDV---QG-CAILSGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPPTEPNA 87 (184)
Q Consensus 15 v~~~~~~~I~~lL~~G~IPIv~g-d~~--~~e~---~~-~~~~s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp~~p~~ 87 (184)
+..++.+.|+.|+++|+|||..| .++ .... .| .+|+++|.+|++||..++||+||+||||||||+++| +|++
T Consensus 188 ~~ive~~~I~~L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~-~~~~ 266 (332)
T 4axs_A 188 VDFIGIDAIKQNVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVDYVYVDFN-KPTQ 266 (332)
T ss_dssp EEETTHHHHHHHHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTT-STTC
T ss_pred ceeecHHHHHHhhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCCceEcCCC-Ccch
Confidence 34578999999999999999883 222 2211 12 468999999999999999999999999999998655 4788
Q ss_pred eeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCe--EEEEcCCCcChhhhhcCCccc
Q 029969 88 VLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGID--VYIVKAASSHSVKALSGELRE 165 (184)
Q Consensus 88 ~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~--v~I~~g~~~~~l~~l~Ge~~~ 165 (184)
++|++++.+| ++++.. .+.+.+|||.+|+++|..+++.|.. ++|.+. .+..++|+|+.
T Consensus 267 ~~i~~it~~e----------~~~~~~------~g~~~~GgM~pKv~Aa~~~v~~g~g~~~iI~~~--~~~~~~l~g~~-- 326 (332)
T 4axs_A 267 KALKTVDVKA----------LNNFIN------QDQFAKGSMLPKIKAAMGFVNGHPNRSAIIADL--SKVEDALKGLS-- 326 (332)
T ss_dssp EECSSCBHHH----------HHHHHH------TTCSCTTTTHHHHHHHHHHHTTCTTCEEEEECS--TTHHHHTTTSS--
T ss_pred hhcccCCHHH----------HHHHHH------CCCcCcCCcHHHHHHHHHHHHhCCCcEEEECCH--HHHHHHHCCCC--
Confidence 9999999876 333321 2457889999999999999998763 555432 23447899864
Q ss_pred CCCCCccccEEE
Q 029969 166 KIPDDWLGTVIH 177 (184)
Q Consensus 166 ~~~~~~~GT~i~ 177 (184)
||+|.
T Consensus 327 -------GT~Iv 331 (332)
T 4axs_A 327 -------GTKII 331 (332)
T ss_dssp -------SEEEB
T ss_pred -------CcEEe
Confidence 99986
No 38
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.80 E-value=1.5e-19 Score=161.34 Aligned_cols=131 Identities=18% Similarity=0.195 Sum_probs=106.2
Q ss_pred CCc-ceechHHHHHHHHcCCeeEEcCceEeeCCCceeee---chhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCc
Q 029969 13 GNL-PVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAIL---SGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNA 87 (184)
Q Consensus 13 g~v-~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~---s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~ 87 (184)
|++ ..++.+.|+.+|++|+|||++|..-.++.+..+++ ++|++|+++|..|+||+|+++|||||||++|| .+|++
T Consensus 167 ~~~~~~~~~~~i~~ll~~g~ipVv~G~~g~~~~g~~~~l~rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dP~~~~~a 246 (473)
T 3c1m_A 167 ARVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTA 246 (473)
T ss_dssp CCEEEECHHHHHHHHHHTTCEEEEESSEEEETTSCEEECCTTTHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTCTTC
T ss_pred ccccHhhhHHHHHHHHhCCcEEEEeCCcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEeeCCCcceeCCCCCCCCC
Confidence 467 57889999999999999999975443443334455 88999999999999999999999999999999 67999
Q ss_pred eeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChhhhhcCCcccCC
Q 029969 88 VLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSVKALSGELREKI 167 (184)
Q Consensus 88 ~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~l~Ge~~~~~ 167 (184)
++++++++.|+ .++. ....++|.+| ++..|.+.|++++|.+++.|+ .
T Consensus 247 ~~i~~is~~e~----------~~l~---------~~g~~~m~~~--a~~~a~~~gi~v~I~~~~~~~--------~---- 293 (473)
T 3c1m_A 247 RRIPKLSYIEA----------MELA---------YFGAKVLHPR--TIEPAMEKGIPILVKNTFEPE--------S---- 293 (473)
T ss_dssp CBCSEEEHHHH----------HHHH---------HTTCTTSCGG--GHHHHHHHTCCEEEEETTSTT--------S----
T ss_pred eEecccCHHHH----------HHHH---------hcCCcchHHH--HHHHHHHcCCEEEEEecCCCC--------C----
Confidence 99999999773 2221 2345789986 788889999999999998764 2
Q ss_pred CCCccccEEEcCc
Q 029969 168 PDDWLGTVIHFSR 180 (184)
Q Consensus 168 ~~~~~GT~i~~~~ 180 (184)
.||+|.+..
T Consensus 294 ----~GT~i~~~~ 302 (473)
T 3c1m_A 294 ----EGTLITNDM 302 (473)
T ss_dssp ----CCEEEESCC
T ss_pred ----ceEEEeccc
Confidence 388888754
No 39
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.79 E-value=2.5e-19 Score=157.69 Aligned_cols=120 Identities=19% Similarity=0.269 Sum_probs=87.5
Q ss_pred CCCcceechHHHHHHHHcCCeeEEcCc-eEeeCC-Cceeee---chhHHHHHHHHhcCCCEEEEeecccceecCCC-cCC
Q 029969 12 GGNLPVADLSVVAKTIKSGFVPVLHGD-AVLDDV-QGCAIL---SGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEP 85 (184)
Q Consensus 12 ~g~v~~~~~~~I~~lL~~G~IPIv~gd-~~~~e~-~~~~~~---s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p 85 (184)
+|++..++.+.|+.+|++|.|||++|. ++. +. +..+++ ++|++|+.+|..|+||+|+++|||||||++|| .+|
T Consensus 110 ~~~v~~~~~~~i~~~l~~g~ipVv~g~~g~~-~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~ 188 (421)
T 3ab4_A 110 NARIVDVTPGRVREALDEGKICIVAGFQGVN-KETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVP 188 (421)
T ss_dssp ------CCHHHHHHHHHTTCEEEC-------------------CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTST
T ss_pred CeeechhhHHHHHHHHhCCCEEEEeCCcCcC-CCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCC
Confidence 377888899999999999999999986 443 32 234555 88999999999999999999999999999999 679
Q ss_pred CceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCc
Q 029969 86 NAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASS 153 (184)
Q Consensus 86 ~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~ 153 (184)
++++|++|+++|+ .++.. .|.+..|++++..|++.|++++|.|+..+
T Consensus 189 ~a~~i~~is~~e~----------~el~~-----------~Ga~v~~~~a~~~a~~~gi~v~I~n~~~~ 235 (421)
T 3ab4_A 189 NAQKLEKLSFEEM----------LELAA-----------VGSKILVLRSVEYARAFNVPLRVRSSYSN 235 (421)
T ss_dssp TCCBCSEECHHHH----------HHHHH-----------TTCCSSCHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCeEccccCHHHH----------HHHHh-----------cCCcCchHHHHHHHHHcCCCEEEecCcCC
Confidence 9999999999773 33211 13344578899999999999999998765
No 40
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.73 E-value=1.2e-17 Score=153.03 Aligned_cols=118 Identities=21% Similarity=0.256 Sum_probs=94.5
Q ss_pred CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeee------chhHHHHHHHHhcCCCEEEEeecccceecCCC-cCC
Q 029969 13 GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAIL------SGDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEP 85 (184)
Q Consensus 13 g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~------s~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p 85 (184)
+++..++++.|+.+|++|.|||++|..-.++. |...+ .+|++|+++|..|+||+|+++|||||||++|| .+|
T Consensus 111 ~~~~~~~~~~i~~ll~~g~IpVv~Gf~g~~~~-g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~ 189 (600)
T 3l76_A 111 ARILEIRPDRLEHHLREGKVVVVAGFQGISSV-EHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVP 189 (600)
T ss_dssp --CCEEEECCHHHHHTTTCEEEEECEEEC-----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCT
T ss_pred ceeccccHHHHHHHHhCCCEEEEECCeecCCC-CCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCC
Confidence 46677888899999999999999975333332 21122 36999999999999999999999999999999 789
Q ss_pred CceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCC
Q 029969 86 NAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAAS 152 (184)
Q Consensus 86 ~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~ 152 (184)
++++|++++++|+ .++. ...+|+|.+ +++..|.+.|++++|.|+..
T Consensus 190 ~a~~i~~is~~e~----------~ela---------~~G~~vm~p--~a~~~a~~~gipv~I~n~~~ 235 (600)
T 3l76_A 190 EAQLMAEITCDEM----------LELA---------SLGAKVLHP--RAVEIARNYGIPLVVRSSWS 235 (600)
T ss_dssp TCCBCSEEEHHHH----------HHTG---------GGGTTTCCH--HHHHHHHHHTCCEEEEETTC
T ss_pred CCeEeeEEcHHHH----------HHHH---------hCCCCccHH--HHHHHHHHCCCeEEEEECCC
Confidence 9999999999763 3331 246789988 88999999999999999863
No 41
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=99.72 E-value=3.7e-17 Score=147.21 Aligned_cols=122 Identities=14% Similarity=0.092 Sum_probs=95.7
Q ss_pred HHHH-HHHHcCCeeEEcCceEeeC-CCceeeec---hhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeee
Q 029969 21 SVVA-KTIKSGFVPVLHGDAVLDD-VQGCAILS---GDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIA 94 (184)
Q Consensus 21 ~~I~-~lL~~G~IPIv~gd~~~~e-~~~~~~~s---~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~ 94 (184)
+.+. .|++.|.|||++|..-.++ .+..+++. +|..|+++|..|+||.++++|||||||+.|| .+|++++|++|+
T Consensus 197 ~~l~~~Ll~~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is 276 (510)
T 2cdq_A 197 KRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLT 276 (510)
T ss_dssp HHHHHHHHHSCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEE
T ss_pred HHHHHHHHhCCcEEEEeCccccCCCCCceEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeC
Confidence 4455 3779999999998554444 33445554 7999999999999999999999999999999 789999999999
Q ss_pred ccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCcChhhhhcCCcccCCCCCcccc
Q 029969 95 VGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASSHSVKALSGELREKIPDDWLGT 174 (184)
Q Consensus 95 ~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~l~Ge~~~~~~~~~~GT 174 (184)
+.|+ .++. ...+++|.+ +++..|.+.|++++|.|+..|+ . .||
T Consensus 277 ~~E~----------~ela---------~~Ga~vmh~--~a~~~a~~~gIpv~I~n~~~p~--------~--------~GT 319 (510)
T 2cdq_A 277 FDEA----------AELA---------YFGAQVLHP--QSMRPAREGEIPVRVKNSYNPK--------A--------PGT 319 (510)
T ss_dssp HHHH----------HHHH---------HHHSSCCCH--HHHHHHHHHTCCEEEEETTSTT--------S--------CCE
T ss_pred HHHH----------HHHH---------hcCcchhHH--HHHHHHHHCCCeEEEEccCcCC--------C--------CCe
Confidence 9873 2221 134577876 4778888999999999987653 2 389
Q ss_pred EEEcC
Q 029969 175 VIHFS 179 (184)
Q Consensus 175 ~i~~~ 179 (184)
+|.++
T Consensus 320 ~I~~~ 324 (510)
T 2cdq_A 320 IITKT 324 (510)
T ss_dssp EEESC
T ss_pred EEecc
Confidence 88875
No 42
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=99.71 E-value=2.1e-17 Score=146.65 Aligned_cols=131 Identities=14% Similarity=0.036 Sum_probs=99.0
Q ss_pred CCCcceeeccC-CCcceechHHHHHHHHcCCeeEEcCceEeeCCCceeee---chhHHHHHHHHhcCCCEEEEeecccce
Q 029969 2 SPFSCGWSTSG-GNLPVADLSVVAKTIKSGFVPVLHGDAVLDDVQGCAIL---SGDVIIRHLAAYMKPDYVVFLTDVLGV 77 (184)
Q Consensus 2 ~~~~~~~~~~~-g~v~~~~~~~I~~lL~~G~IPIv~gd~~~~e~~~~~~~---s~D~iA~~lA~~l~Ad~li~ltdVdGV 77 (184)
.+..++..+.+ .++..++.+.|+.+|+.|.|||++|..-.++.+....+ .+|..|+++|..|+||+++++||||||
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGv 213 (446)
T 3tvi_A 134 DAAEVIFFDKSGCFDEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGF 213 (446)
T ss_dssp CGGGTCBBCC--CBCHHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CHHHheeeCCCCceehHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCcc
Confidence 34555555442 23445678899999999999999986444443334444 479999999999999999999999999
Q ss_pred ecCCC-cCCCceeeeeeeccCCCCcccchhHHHhhccchhhhcccccccCchHHHHHHHHHHHHCCCeEEEEcCCCc
Q 029969 78 YSHPP-TEPNAVLLREIAVGEDGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKISEAAMIAKLGIDVYIVKAASS 153 (184)
Q Consensus 78 y~~dp-~~p~~~li~~I~~~e~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl~aa~~a~~~gi~v~I~~g~~~ 153 (184)
|+.|| .+|++++|++++++|+ .++. ....+.| +.+++..|.+.|++++|.|+..|
T Consensus 214 yt~dP~~~~~a~~i~~is~~e~----------~ela---------~~Ga~vl--~~~a~~~a~~~~ipi~i~~~~~p 269 (446)
T 3tvi_A 214 LMADPRIVENPKTISKISYKEL----------RELS---------YMGATVL--HEEAIFPVKDSGIPINIKNTNKP 269 (446)
T ss_dssp BSSCTTTSSSCCBCSEEEHHHH----------HHTT---------TC----C--CSTTTHHHHHSSCCEEEEETTBT
T ss_pred CCCCCCcCCCCeEcceeCHHHH----------HHHH---------hCCCCcc--hHHHHHHHHHcCCeEEEecCCCC
Confidence 99999 7899999999999763 3331 1234455 56888999999999999998765
No 43
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=99.68 E-value=9.6e-17 Score=142.49 Aligned_cols=118 Identities=21% Similarity=0.268 Sum_probs=91.5
Q ss_pred HHHHHHHcCCeeEEcCceEeeCCCceeeec---hhHHHHHHHHhcCCCEEEEeecccceecCCC-cCCCceeeeeeeccC
Q 029969 22 VVAKTIKSGFVPVLHGDAVLDDVQGCAILS---GDVIIRHLAAYMKPDYVVFLTDVLGVYSHPP-TEPNAVLLREIAVGE 97 (184)
Q Consensus 22 ~I~~lL~~G~IPIv~gd~~~~e~~~~~~~s---~D~iA~~lA~~l~Ad~li~ltdVdGVy~~dp-~~p~~~li~~I~~~e 97 (184)
.++.|++.+ |||++|..-.++.+..++++ +|++|+++|..|+||+|+++|||||||++|| .+|++++|++|+++|
T Consensus 169 ~l~~l~~~~-IpVv~Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e 247 (449)
T 2j0w_A 169 QLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAE 247 (449)
T ss_dssp HTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHH
T ss_pred HHHHHhcCC-EEEEeCCeeeCCCCCEEEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCccHHH
Confidence 556666555 99999765544433345555 7999999999999999999999999999999 789999999999976
Q ss_pred CCCcccchhHHHhhccchhhhcccccccCchHHHH---HHHHHHHHCCCeEEEEcCCCcChhhhhcCCcccCCCCCcccc
Q 029969 98 DGSWSITKPTLQHMNNQVEITVAAHDTTGGMVTKI---SEAAMIAKLGIDVYIVKAASSHSVKALSGELREKIPDDWLGT 174 (184)
Q Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~vtGgm~~Kl---~aa~~a~~~gi~v~I~~g~~~~~l~~l~Ge~~~~~~~~~~GT 174 (184)
+ .++.. -| +|+ +++..|.+.|++++|.|++.|+ . .||
T Consensus 248 ~----------~ela~------------~G--~kvlh~~a~~~a~~~gi~v~I~~~~~p~--------~--------~GT 287 (449)
T 2j0w_A 248 A----------AEMAT------------FG--AKVLHPATLLPAVRSDIPVFVGSSKDPR--------A--------GGT 287 (449)
T ss_dssp H----------HHHHH------------TT--CTTSCTTTHHHHHHHTCCEEEEESSCTT--------S--------CCE
T ss_pred H----------HHHHh------------cC--CccchHHHHHHHHHCCCeEEEEECCCCC--------C--------Cee
Confidence 3 22210 12 477 6778899999999999998664 2 389
Q ss_pred EEEcCc
Q 029969 175 VIHFSR 180 (184)
Q Consensus 175 ~i~~~~ 180 (184)
+|.+..
T Consensus 288 ~I~~~~ 293 (449)
T 2j0w_A 288 LVCNKT 293 (449)
T ss_dssp EEESCC
T ss_pred EEeccc
Confidence 998753
No 44
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=45.20 E-value=47 Score=24.42 Aligned_cols=13 Identities=8% Similarity=0.363 Sum_probs=10.7
Q ss_pred EEeecccceecCC
Q 029969 69 VFLTDVLGVYSHP 81 (184)
Q Consensus 69 i~ltdVdGVy~~d 81 (184)
++++|+||++++.
T Consensus 11 liv~D~DGtL~d~ 23 (168)
T 3ewi_A 11 LLVCNIDGCLTNG 23 (168)
T ss_dssp EEEEECCCCCSCS
T ss_pred EEEEeCccceECC
Confidence 6788999999863
No 45
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=24.37 E-value=1.2e+02 Score=21.81 Aligned_cols=12 Identities=42% Similarity=0.598 Sum_probs=9.5
Q ss_pred EEeecccceecC
Q 029969 69 VFLTDVLGVYSH 80 (184)
Q Consensus 69 i~ltdVdGVy~~ 80 (184)
++++|.||.+.+
T Consensus 10 ~i~~DlDGTL~~ 21 (180)
T 1k1e_A 10 FVITDVDGVLTD 21 (180)
T ss_dssp EEEEECTTTTSC
T ss_pred EEEEeCCCCcCC
Confidence 467899998864
Done!