Your job contains 1 sequence.
>029970
MLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVN
PVSGAVGLLWTGNWNVCQSAVERVLCGGALQPLPCPLAPELDDVSESAVNCTNNSPKDVI
TPPPKRKAVSDFQDDLHLGLKPCLPEKLRAETPSEESETTTSGTGSDNCCSEVAGEKKLL
RLFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029970
(184 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083063 - symbol:LBD38 "LOB domain-containing ... 396 5.8e-40 2
TAIR|locus:2158247 - symbol:LBD37 "LOB domain-containing ... 391 2.7e-36 1
TAIR|locus:2120071 - symbol:LBD39 "AT4G37540" species:370... 359 1.2e-35 2
TAIR|locus:2076829 - symbol:LBD41 "LOB domain-containing ... 293 6.6e-28 2
TAIR|locus:2019698 - symbol:LBD40 "AT1G67100" species:370... 310 1.0e-27 1
TAIR|locus:2201267 - symbol:LBD42 "AT1G68510" species:370... 288 2.2e-25 1
>TAIR|locus:2083063 [details] [associations]
symbol:LBD38 "LOB domain-containing protein 38"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132978 InterPro:IPR004883
Pfam:PF03195 PROSITE:PS50891 UniGene:At.27456 HOGENOM:HOG000237458
ProtClustDB:CLSN2715396 EMBL:AB473873 EMBL:BT002449 EMBL:BT006287
EMBL:AY085761 IPI:IPI00541928 PIR:T45847 RefSeq:NP_190563.1
UniGene:At.43135 EnsemblPlants:AT3G49940.1 GeneID:824156
KEGG:ath:AT3G49940 TAIR:At3g49940 eggNOG:NOG303187
InParanoid:Q9SN23 OMA:CIQWIES PhylomeDB:Q9SN23
Genevestigator:Q9SN23 GermOnline:AT3G49940 Uniprot:Q9SN23
Length = 247
Score = 396 (144.5 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 75/94 (79%), Positives = 86/94 (91%)
Query: 1 MLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVN 60
+LR IQWI +P+AQ +ATVFVAKFFGRAGLMSFISAVPE+Q P+LFQSLLYEA GRTVN
Sbjct: 18 ILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVN 77
Query: 61 PVSGAVGLLWTGNWNVCQSAVERVLCGGALQPLP 94
PV+GAVGLLWTGNWNVCQ+AVE VL GG+L+P+P
Sbjct: 78 PVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIP 111
Score = 46 (21.3 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 123 PPKRKAVSDFQD---DLHLGLKPCLPEK 147
PPKRK +S Q +L L L P P K
Sbjct: 170 PPKRKRLSSEQQPSSELDLSLIPIYPIK 197
>TAIR|locus:2158247 [details] [associations]
symbol:LBD37 "LOB domain-containing protein 37"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006807 "nitrogen compound metabolic process"
evidence=IMP] [GO:0060776 "simple leaf morphogenesis" evidence=IMP]
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006807 EMBL:AB007645
GO:GO:0060776 InterPro:IPR004883 Pfam:PF03195 PROSITE:PS50891
EMBL:AF447894 EMBL:AB473872 EMBL:AY087998 EMBL:BT024477
IPI:IPI00519656 RefSeq:NP_201543.1 UniGene:At.27456
EnsemblPlants:AT5G67420.1 GeneID:836878 KEGG:ath:AT5G67420
TAIR:At5g67420 eggNOG:NOG269376 HOGENOM:HOG000237458
InParanoid:Q9FN11 OMA:QWIETAD PhylomeDB:Q9FN11
ProtClustDB:CLSN2715396 Genevestigator:Q9FN11 GermOnline:AT5G67420
Uniprot:Q9FN11
Length = 250
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 72/94 (76%), Positives = 85/94 (90%)
Query: 1 MLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVN 60
+LR IQWI T AQ +ATVFVAKFFGRAGLMSFISAVP++QRP+LFQSLLYEA GRTVN
Sbjct: 18 ILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVN 77
Query: 61 PVSGAVGLLWTGNWNVCQSAVERVLCGGALQPLP 94
PV+GA+G+LWTGNWN+CQ+AVE VL GG+L+P+P
Sbjct: 78 PVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIP 111
>TAIR|locus:2120071 [details] [associations]
symbol:LBD39 "AT4G37540" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016126 "sterol biosynthetic
process" evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL035605 EMBL:AL161591 InterPro:IPR004883 Pfam:PF03195
PROSITE:PS50891 HOGENOM:HOG000237458 ProtClustDB:CLSN2715396
EMBL:AB473874 EMBL:AY072144 EMBL:AY122976 EMBL:AY087291
IPI:IPI00528264 PIR:T04711 RefSeq:NP_195470.1 UniGene:At.31240
EnsemblPlants:AT4G37540.1 GeneID:829909 KEGG:ath:AT4G37540
TAIR:At4g37540 eggNOG:NOG304806 InParanoid:Q9SZE8 OMA:DESSEIW
PhylomeDB:Q9SZE8 Genevestigator:Q9SZE8 GermOnline:AT4G37540
Uniprot:Q9SZE8
Length = 240
Score = 359 (131.4 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 67/93 (72%), Positives = 82/93 (88%)
Query: 1 MLRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVN 60
+LR +QWI + ++Q +ATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLL+EA GRTVN
Sbjct: 18 ILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVN 77
Query: 61 PVSGAVGLLWTGNWNVCQSAVERVLCGGALQPL 93
PV+GAVG+LWT NW+VCQ+AVE VL GG L+P+
Sbjct: 78 PVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPI 110
Score = 42 (19.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 167 DNCCSEVAGEKKLLRLFL 184
DN GEKKLL LF+
Sbjct: 223 DNKQKRNKGEKKLLNLFV 240
>TAIR|locus:2076829 [details] [associations]
symbol:LBD41 "LOB domain-containing protein 41"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001666 "response to hypoxia"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0010310
"regulation of hydrogen peroxide metabolic process" evidence=RCA]
EMBL:AC021640 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
InterPro:IPR017414 InterPro:IPR004883 Pfam:PF03195
PIRSF:PIRSF038155 PROSITE:PS50891 HOGENOM:HOG000237458
EMBL:AF447895 EMBL:AB473871 EMBL:AY090370 EMBL:AY122896
EMBL:AY086061 IPI:IPI00518222 RefSeq:NP_566175.1 UniGene:At.22633
STRING:Q9M886 PRIDE:Q9M886 EnsemblPlants:AT3G02550.1 GeneID:821112
KEGG:ath:AT3G02550 TAIR:At3g02550 eggNOG:NOG311141
InParanoid:Q9M886 OMA:HEGESKE PhylomeDB:Q9M886
ProtClustDB:CLSN2917071 Genevestigator:Q9M886 GermOnline:AT3G02550
Uniprot:Q9M886
Length = 263
Score = 293 (108.2 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 53/86 (61%), Positives = 69/86 (80%)
Query: 2 LRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNP 61
+R + WI +P+AQANATVF+AKF+GRAGLM+ I+A P RP +F+SLL+EA GR VNP
Sbjct: 21 IRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNP 80
Query: 62 VSGAVGLLWTGNWNVCQSAVERVLCG 87
+ G+VGLLW+GNW +CQ AVE V+ G
Sbjct: 81 IYGSVGLLWSGNWQLCQDAVEAVMKG 106
Score = 34 (17.0 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 123 PPKRKAVSDFQDDLHLGLKP 142
PP K + + DL L L+P
Sbjct: 211 PPAVKGSGEIKLDLTLRLEP 230
>TAIR|locus:2019698 [details] [associations]
symbol:LBD40 "AT1G67100" species:3702 "Arabidopsis
thaliana" [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009739 EMBL:AC004146 InterPro:IPR004883 Pfam:PF03195
PROSITE:PS50891 HOGENOM:HOG000237458 EMBL:AB473870 EMBL:BT010943
EMBL:BT011650 EMBL:AK229650 IPI:IPI00546332 PIR:H96694
RefSeq:NP_176881.1 UniGene:At.19223 EnsemblPlants:AT1G67100.1
GeneID:843030 KEGG:ath:AT1G67100 TAIR:At1g67100 eggNOG:NOG248044
InParanoid:Q9ZW96 OMA:GACKEER PhylomeDB:Q9ZW96
ProtClustDB:CLSN2914393 Genevestigator:Q9ZW96 GermOnline:AT1G67100
Uniprot:Q9ZW96
Length = 233
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 54/97 (55%), Positives = 77/97 (79%)
Query: 2 LRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNP 61
+R +QWI + ++QANATVF+AKF+GRAGLM+ ++ P+ RP++F+SLLYEA GR VNP
Sbjct: 21 IRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNP 80
Query: 62 VSGAVGLLWTGNWNVCQSAVERVLCGGALQPLPCPLA 98
+ G+VGLLW+GNW++CQ+AVE V+ G + P+ C A
Sbjct: 81 IYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAA 117
>TAIR|locus:2201267 [details] [associations]
symbol:LBD42 "AT1G68510" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011915
InterPro:IPR017414 InterPro:IPR004883 Pfam:PF03195
PIRSF:PIRSF038155 PROSITE:PS50891 HOGENOM:HOG000237458
EMBL:AF447896 EMBL:AB473869 IPI:IPI00531145 PIR:C96709
RefSeq:NP_177018.1 UniGene:At.27200 EnsemblPlants:AT1G68510.1
GeneID:843180 KEGG:ath:AT1G68510 TAIR:At1g68510 eggNOG:NOG256237
OMA:WIKSADS PhylomeDB:Q9CA30 ProtClustDB:CLSN2914587
Genevestigator:Q9CA30 GermOnline:AT1G68510 Uniprot:Q9CA30
Length = 233
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 53/97 (54%), Positives = 73/97 (75%)
Query: 2 LRQSIQWIGTPQAQANATVFVAKFFGRAGLMSFISAVPETQRPSLFQSLLYEAVGRTVNP 61
+R +QWI + +QANAT+F+AKF+GRAGL++ I + P+ RP++F+SLLYEA GR VNP
Sbjct: 21 IRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNP 80
Query: 62 VSGAVGLLWTGNWNVCQSAVERVLCGGALQPLPCPLA 98
V G+VGL+W+GNW CQ+AV+ VL G + P P A
Sbjct: 81 VDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSA 117
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 184 168 0.00079 108 3 11 22 0.39 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 594 (63 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.42u 0.08s 16.50t Elapsed: 00:00:01
Total cpu time: 16.42u 0.08s 16.50t Elapsed: 00:00:01
Start: Mon May 20 15:35:37 2013 End: Mon May 20 15:35:38 2013