Query 029971
Match_columns 184
No_of_seqs 172 out of 395
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 10:08:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wjz_A 1700030A21RIK protein; 99.5 1.3E-14 4.3E-19 105.1 4.7 58 56-113 10-81 (94)
2 2ys8_A RAB-related GTP-binding 99.5 8.4E-15 2.9E-19 106.7 3.8 52 60-111 25-83 (90)
3 2dn9_A DNAJ homolog subfamily 99.5 1.2E-13 4E-18 97.3 7.4 57 59-115 4-68 (79)
4 2cug_A Mkiaa0962 protein; DNAJ 99.5 2.1E-13 7.3E-18 98.4 8.5 56 60-115 15-77 (88)
5 2guz_A Mitochondrial import in 99.5 1.9E-14 6.5E-19 100.8 2.7 54 58-111 10-68 (71)
6 2yua_A Williams-beuren syndrom 99.5 1.1E-13 3.9E-18 101.9 7.0 58 58-115 13-78 (99)
7 2ctr_A DNAJ homolog subfamily 99.4 1.6E-13 5.5E-18 99.0 6.7 56 60-115 5-67 (88)
8 2ctp_A DNAJ homolog subfamily 99.4 1.3E-13 4.3E-18 97.1 5.9 56 59-114 4-66 (78)
9 1hdj_A Human HSP40, HDJ-1; mol 99.4 1.3E-13 4.5E-18 96.8 5.8 55 61-115 2-63 (77)
10 2och_A Hypothetical protein DN 99.4 1.8E-13 6.2E-18 95.3 6.5 55 60-114 6-65 (73)
11 2o37_A Protein SIS1; HSP40, J- 99.4 1.6E-13 5.4E-18 100.0 6.2 56 59-114 5-65 (92)
12 2ej7_A HCG3 gene; HCG3 protein 99.4 2.7E-13 9.3E-18 96.0 5.2 54 61-114 8-70 (82)
13 2ctq_A DNAJ homolog subfamily 99.4 7.6E-13 2.6E-17 99.6 7.1 59 57-115 15-81 (112)
14 2dmx_A DNAJ homolog subfamily 99.4 5.7E-13 1.9E-17 96.5 5.9 55 61-115 8-71 (92)
15 2ctw_A DNAJ homolog subfamily 99.4 7.7E-13 2.6E-17 99.3 6.7 57 59-115 14-78 (109)
16 1faf_A Large T antigen; J doma 99.3 7.9E-13 2.7E-17 94.5 5.1 56 60-115 9-70 (79)
17 2lgw_A DNAJ homolog subfamily 99.3 1.8E-12 6.2E-17 96.2 7.0 54 62-115 2-64 (99)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.3 1.6E-12 5.6E-17 96.9 5.6 55 61-115 14-80 (109)
19 1bq0_A DNAJ, HSP40; chaperone, 99.3 4.9E-13 1.7E-17 99.0 2.2 55 61-115 2-64 (103)
20 1iur_A KIAA0730 protein; DNAJ 99.3 9.9E-13 3.4E-17 96.4 3.6 52 59-110 13-73 (88)
21 2l6l_A DNAJ homolog subfamily 99.3 2.2E-12 7.6E-17 101.3 5.0 57 57-113 5-75 (155)
22 3apq_A DNAJ homolog subfamily 99.3 5.4E-12 1.9E-16 100.3 5.8 54 62-115 2-63 (210)
23 2qwo_B Putative tyrosine-prote 99.2 6E-12 2.1E-16 93.5 4.1 47 62-108 33-90 (92)
24 1gh6_A Large T antigen; tumor 99.2 2.7E-12 9.1E-17 98.2 1.0 56 60-115 6-67 (114)
25 3lz8_A Putative chaperone DNAJ 99.2 2.2E-12 7.4E-17 113.6 0.0 58 58-115 24-88 (329)
26 2pf4_E Small T antigen; PP2A, 99.1 1.3E-11 4.5E-16 101.0 0.8 57 59-115 8-70 (174)
27 3hho_A CO-chaperone protein HS 99.1 1.5E-10 5.2E-15 93.5 6.2 55 61-115 3-72 (174)
28 3ag7_A Putative uncharacterize 99.1 8.4E-11 2.9E-15 88.7 4.2 48 61-109 40-102 (106)
29 1n4c_A Auxilin; four helix bun 99.0 8.6E-11 2.9E-15 96.8 4.0 50 62-111 117-177 (182)
30 1fpo_A HSC20, chaperone protei 99.0 3.4E-10 1.2E-14 91.3 5.4 52 63-114 2-68 (171)
31 3bvo_A CO-chaperone protein HS 98.9 1.4E-09 4.9E-14 90.3 6.9 54 61-114 42-110 (207)
32 2guz_B Mitochondrial import in 98.9 1.2E-09 4.1E-14 76.5 4.2 52 59-110 1-59 (65)
33 3apo_A DNAJ homolog subfamily 98.9 4E-10 1.4E-14 105.1 1.7 57 59-115 18-82 (780)
34 3uo3_A J-type CO-chaperone JAC 98.8 4.7E-09 1.6E-13 85.6 5.5 58 58-115 7-76 (181)
35 2y4t_A DNAJ homolog subfamily 97.7 1.7E-05 5.7E-10 65.4 3.4 54 62-115 382-446 (450)
36 2pzi_A Probable serine/threoni 93.1 0.042 1.5E-06 50.5 2.7 44 62-105 629-674 (681)
37 2gqb_A Conserved hypothetical 39.8 27 0.00092 27.3 3.7 59 60-127 69-129 (130)
38 1qqr_A Streptokinase domain B; 38.4 25 0.00084 27.8 3.3 38 56-93 26-63 (138)
39 2wjv_D Regulator of nonsense t 28.7 36 0.0012 24.7 2.7 26 93-118 5-30 (97)
40 4dnd_A Syntaxin-10, SYN10; str 28.7 42 0.0014 25.6 3.1 30 54-90 18-47 (130)
41 4gic_A HDH, histidinol dehydro 27.1 57 0.002 29.8 4.2 36 74-117 74-109 (423)
42 1kae_A HDH, histidinol dehydro 27.0 63 0.0022 29.6 4.4 36 74-117 68-103 (434)
43 1ozj_A SMAD 3; MAD homology do 21.6 57 0.002 25.7 2.7 39 66-105 14-56 (144)
44 3b0c_W CENP-W, centromere prot 21.0 73 0.0025 21.6 2.9 21 72-92 56-76 (76)
45 2dpo_A L-gulonate 3-dehydrogen 20.8 1.8E+02 0.0062 24.5 5.9 55 62-116 260-314 (319)
No 1
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.50 E-value=1.3e-14 Score=105.09 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=50.0
Q ss_pred CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------------hHHHHHHHHHHHHHhHHHH
Q 029971 56 FSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------------RSEESIEAAFEKLLMTSFR 113 (184)
Q Consensus 56 Fprm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~--------------~~~~~IeaAYD~Ilm~~l~ 113 (184)
...|...|+|++|||+++|+.+|||+||++|+++||||. +.+.+|+.||+.|.....|
T Consensus 10 ~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R 81 (94)
T 1wjz_A 10 LEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETK 81 (94)
T ss_dssp CSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHH
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHH
Confidence 345778999999999999999999999999999999997 3567999999977665443
No 2
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=8.4e-15 Score=106.67 Aligned_cols=52 Identities=21% Similarity=0.187 Sum_probs=46.2
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh-------HHHHHHHHHHHHHhHH
Q 029971 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER-------SEESIEAAFEKLLMTS 111 (184)
Q Consensus 60 ~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~-------~~~~IeaAYD~Ilm~~ 111 (184)
...|||++|||+++|+.+|||+||++|+++||||.. .+.+|+.||+.|....
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~ 83 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNI 83 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcc
Confidence 468999999999999999999999999999999953 6789999999665543
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.2e-13 Score=97.27 Aligned_cols=57 Identities=25% Similarity=0.242 Sum_probs=49.2
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hHHHHHHHHHHHHHhHHHHHh
Q 029971 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~--------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
+...|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|..
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 68 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 456899999999999999999999999999999993 457899999997777655443
No 4
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.46 E-value=2.1e-13 Score=98.37 Aligned_cols=56 Identities=27% Similarity=0.321 Sum_probs=49.0
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hHHHHHHHHHHHHHhHHHHHh
Q 029971 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 60 ~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
...|||++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|..
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 77 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHH
Confidence 36799999999999999999999999999999995 467899999998877655544
No 5
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.9e-14 Score=100.83 Aligned_cols=54 Identities=7% Similarity=0.041 Sum_probs=48.4
Q ss_pred CCCcCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCC----hhHHHHHHHHHHHHHhHH
Q 029971 58 RIKVWDPYKRLGISP-YASEEEIWGSRNFLLEQYTGH----ERSEESIEAAFEKLLMTS 111 (184)
Q Consensus 58 rm~~~dPYevLGVs~-~AS~dEIk~Ayr~L~~qyh~D----~~~~~~IeaAYD~Ilm~~ 111 (184)
.|+.+++|++|||++ +||.+||++||++|+++|||| ++.+.+|++|||.|....
T Consensus 10 ~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~ 68 (71)
T 2guz_A 10 KMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRG 68 (71)
T ss_dssp SCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 588899999999999 799999999999999999998 457889999999776543
No 6
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=1.1e-13 Score=101.92 Aligned_cols=58 Identities=19% Similarity=0.169 Sum_probs=50.9
Q ss_pred CCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh--------HHHHHHHHHHHHHhHHHHHh
Q 029971 58 RIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER--------SEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 58 rm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~--------~~~~IeaAYD~Ilm~~l~~R 115 (184)
.|...|+|++|||+++|+.+|||+||++|+++||||.. .+.+|+.||+.|.....|+.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 78 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRK 78 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 57789999999999999999999999999999999943 57799999997777665554
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.6e-13 Score=99.03 Aligned_cols=56 Identities=25% Similarity=0.250 Sum_probs=48.7
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hHHHHHHHHHHHHHhHHHHHh
Q 029971 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 60 ~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
...|+|++|||+++|+.+||++||++|+++||||. +.+.+|+.||+.|.....|..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 67 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKE 67 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 46899999999999999999999999999999994 367899999998777654444
No 8
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.3e-13 Score=97.06 Aligned_cols=56 Identities=23% Similarity=0.227 Sum_probs=48.5
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hHHHHHHHHHHHHHhHHHHH
Q 029971 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFRR 114 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-------~~~~~IeaAYD~Ilm~~l~~ 114 (184)
++..|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 66 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRK 66 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHH
Confidence 456899999999999999999999999999999995 36789999999776654443
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.43 E-value=1.3e-13 Score=96.76 Aligned_cols=55 Identities=25% Similarity=0.220 Sum_probs=47.5
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hHHHHHHHHHHHHHhHHHHHh
Q 029971 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 61 ~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
..|||++|||+++||.+||++||++|+++||||. +.+.+|++||+.|.....|..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 63 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREI 63 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHH
Confidence 5799999999999999999999999999999994 467899999997766544443
No 10
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.43 E-value=1.8e-13 Score=95.32 Aligned_cols=55 Identities=24% Similarity=0.271 Sum_probs=47.8
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-----hHHHHHHHHHHHHHhHHHHH
Q 029971 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-----RSEESIEAAFEKLLMTSFRR 114 (184)
Q Consensus 60 ~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-----~~~~~IeaAYD~Ilm~~l~~ 114 (184)
...|+|++|||+++|+.+||++||++|+++||||. +.+.+|+.||+.|.....|.
T Consensus 6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~ 65 (73)
T 2och_A 6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQ 65 (73)
T ss_dssp CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHH
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHH
Confidence 45799999999999999999999999999999994 56889999999776654443
No 11
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.6e-13 Score=99.97 Aligned_cols=56 Identities=29% Similarity=0.298 Sum_probs=48.8
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-----hHHHHHHHHHHHHHhHHHHH
Q 029971 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-----RSEESIEAAFEKLLMTSFRR 114 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-----~~~~~IeaAYD~Ilm~~l~~ 114 (184)
+...|+|++|||+++|+.+||++||++|+++||||. +.+.+|++||+.|.....|.
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~ 65 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKRE 65 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHH
Confidence 467899999999999999999999999999999995 46789999999776654443
No 12
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=2.7e-13 Score=95.98 Aligned_cols=54 Identities=22% Similarity=0.204 Sum_probs=46.7
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh---------HHHHHHHHHHHHHhHHHHH
Q 029971 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER---------SEESIEAAFEKLLMTSFRR 114 (184)
Q Consensus 61 ~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~---------~~~~IeaAYD~Ilm~~l~~ 114 (184)
..|+|++|||+++|+.+||++||++|+++||||.. .+.+|+.||+.|.....|.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~ 70 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 47999999999999999999999999999999942 5679999999776654443
No 13
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=7.6e-13 Score=99.59 Aligned_cols=59 Identities=20% Similarity=0.138 Sum_probs=50.1
Q ss_pred CCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hHHHHHHHHHHHHHhHHHHHh
Q 029971 57 SRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 57 prm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~--------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
..+...|+|++|||+++|+.+|||+||++|+++||||. +.+.+|+.||+.|.....|+.
T Consensus 15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~ 81 (112)
T 2ctq_A 15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRAR 81 (112)
T ss_dssp CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 34567899999999999999999999999999999994 356799999998777655444
No 14
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=5.7e-13 Score=96.50 Aligned_cols=55 Identities=22% Similarity=0.232 Sum_probs=47.7
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hHHHHHHHHHHHHHhHHHHHh
Q 029971 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 61 ~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~---------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
..|+|++|||+++|+.+||++||++|+++||||. +.+.+|+.||+.|.....|..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 71 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSL 71 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4799999999999999999999999999999994 256799999998777655444
No 15
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.37 E-value=7.7e-13 Score=99.29 Aligned_cols=57 Identities=21% Similarity=0.159 Sum_probs=49.3
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hHHHHHHHHHHHHHhHHHHHh
Q 029971 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~--------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
+...|||++|||+++|+.+|||+||++|+++||||. +.+.+|+.||+.|.....|+.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~ 78 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 457899999999999999999999999999999994 346799999997777655554
No 16
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.34 E-value=7.9e-13 Score=94.53 Aligned_cols=56 Identities=4% Similarity=-0.064 Sum_probs=47.8
Q ss_pred CcCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCh----hHHHHHHHHHHHHHhHHHHHh
Q 029971 60 KVWDPYKRLGISPY--ASEEEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 60 ~~~dPYevLGVs~~--AS~dEIk~Ayr~L~~qyh~D~----~~~~~IeaAYD~Ilm~~l~~R 115 (184)
...++|++|||+++ |+.+|||+|||+|+++||||. +.+.+|++||+.|.....+.|
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH
Confidence 34689999999999 999999999999999999984 678899999997665444443
No 17
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.34 E-value=1.8e-12 Score=96.19 Aligned_cols=54 Identities=19% Similarity=0.140 Sum_probs=46.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hHHHHHHHHHHHHHhHHHHHh
Q 029971 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 62 ~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~---------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
.|+|++|||+++||.+|||+||++|+++||||. +.+.+|++||+.|.....|+.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~ 64 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 699999999999999999999999999999994 256799999998776655443
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.32 E-value=1.6e-12 Score=96.86 Aligned_cols=55 Identities=13% Similarity=0.117 Sum_probs=47.7
Q ss_pred cCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCh-----------hHHHHHHHHHHHHHhHHHHHh
Q 029971 61 VWDPYKRLGISPYA-SEEEIWGSRNFLLEQYTGHE-----------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 61 ~~dPYevLGVs~~A-S~dEIk~Ayr~L~~qyh~D~-----------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
..|||++|||+++| +.+|||+||++|+++||||. +.+.+|+.||+.|.....|..
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~ 80 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTN 80 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 58999999999999 99999999999999999993 356799999997776655443
No 19
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.30 E-value=4.9e-13 Score=98.97 Aligned_cols=55 Identities=29% Similarity=0.291 Sum_probs=47.9
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------hHHHHHHHHHHHHHhHHHHHh
Q 029971 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 61 ~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~--------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
..|+|++|||+++||.+|||+||++|+++||||. +...+|++||+.|.....|+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 64 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 4799999999999999999999999999999994 356799999998777655544
No 20
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.30 E-value=9.9e-13 Score=96.36 Aligned_cols=52 Identities=8% Similarity=-0.070 Sum_probs=45.9
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh---------hHHHHHHHHHHHHHhH
Q 029971 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE---------RSEESIEAAFEKLLMT 110 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~---------~~~~~IeaAYD~Ilm~ 110 (184)
++..+.|++|||+++||.+|||+||++|+++||||. +.+.+|+.||+.|...
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~ 73 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQ 73 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 556899999999999999999999999999999993 3567999999966553
No 21
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.28 E-value=2.2e-12 Score=101.31 Aligned_cols=57 Identities=19% Similarity=0.191 Sum_probs=48.7
Q ss_pred CCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh--------------hHHHHHHHHHHHHHhHHHH
Q 029971 57 SRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE--------------RSEESIEAAFEKLLMTSFR 113 (184)
Q Consensus 57 prm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~--------------~~~~~IeaAYD~Ilm~~l~ 113 (184)
+.|...|+|++|||+++|+.+|||+||++|+++||||+ +.+.+|++||+.|.....|
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R 75 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETK 75 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHH
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34667899999999999999999999999999999994 3567999999976655444
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.25 E-value=5.4e-12 Score=100.29 Aligned_cols=54 Identities=26% Similarity=0.254 Sum_probs=47.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh--------HHHHHHHHHHHHHhHHHHHh
Q 029971 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER--------SEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 62 ~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~--------~~~~IeaAYD~Ilm~~l~~R 115 (184)
+|+|++|||+++|+.+|||+|||+|+++||||.. .+.+|++||+.|.....|+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~ 63 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 63 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 6999999999999999999999999999999953 56799999998777665554
No 23
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.22 E-value=6e-12 Score=93.52 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=42.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh-----------HHHHHHHHHHHHH
Q 029971 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER-----------SEESIEAAFEKLL 108 (184)
Q Consensus 62 ~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~-----------~~~~IeaAYD~Il 108 (184)
.+.|++|||+++||.+|||+|||+|+.+||||+. .+.+|+.|||.+.
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~ 90 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFE 90 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999842 4679999999664
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.19 E-value=2.7e-12 Score=98.15 Aligned_cols=56 Identities=7% Similarity=0.007 Sum_probs=48.5
Q ss_pred CcCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCh----hHHHHHHHHHHHHHhHHHHHh
Q 029971 60 KVWDPYKRLGISPYASE--EEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 60 ~~~dPYevLGVs~~AS~--dEIk~Ayr~L~~qyh~D~----~~~~~IeaAYD~Ilm~~l~~R 115 (184)
...|+|++|||+++|+. +|||+|||+|+++||||+ +.+.+|+.||+.|.....|++
T Consensus 6 ~~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~ 67 (114)
T 1gh6_A 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 67 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCC
T ss_pred hhhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHH
Confidence 34689999999999999 999999999999999994 478899999997766655554
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.18 E-value=2.2e-12 Score=113.61 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=0.0
Q ss_pred CCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-------hHHHHHHHHHHHHHhHHHHHh
Q 029971 58 RIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 58 rm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
.|+.+|||++|||+++||.+|||+|||+|+++||||. +++.+|++||+.|.....|+.
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~ 88 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88 (329)
T ss_dssp -----------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 3777999999999999999999999999999999994 357799999997766544433
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.09 E-value=1.3e-11 Score=100.97 Aligned_cols=57 Identities=7% Similarity=-0.020 Sum_probs=48.4
Q ss_pred CCcCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCh----hHHHHHHHHHHHHHhHHHHHh
Q 029971 59 IKVWDPYKRLGISPYAS--EEEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS--~dEIk~Ayr~L~~qyh~D~----~~~~~IeaAYD~Ilm~~l~~R 115 (184)
....|+|++|||+++|+ .+|||+|||+|+++||||. +.+.+|++||+.|.....|++
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~ 70 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH 70 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHT
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 34579999999999999 6999999999999999995 467899999997777665555
No 27
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.07 E-value=1.5e-10 Score=93.45 Aligned_cols=55 Identities=11% Similarity=0.140 Sum_probs=46.2
Q ss_pred cCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCh-------------hHHHHHHHHHHHHHhHHHHHh
Q 029971 61 VWDPYKRLGISPYAS--EEEIWGSRNFLLEQYTGHE-------------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 61 ~~dPYevLGVs~~AS--~dEIk~Ayr~L~~qyh~D~-------------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
..|||++|||+++++ .+||++||++|+++||||. +....|+.||+.|.....|..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~ 72 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAE 72 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 469999999999999 9999999999999999995 245789999997766544443
No 28
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.06 E-value=8.4e-11 Score=88.70 Aligned_cols=48 Identities=8% Similarity=-0.137 Sum_probs=41.6
Q ss_pred cCCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh---------------HHHHHHHHHHHHHh
Q 029971 61 VWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER---------------SEESIEAAFEKLLM 109 (184)
Q Consensus 61 ~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~---------------~~~~IeaAYD~Ilm 109 (184)
+.|+|++||++. ||.+|||+|||+|+.+||||+. ++.+|++||+.+..
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd 102 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNT 102 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcC
Confidence 379999999996 9999999999999999999852 35689999997643
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.05 E-value=8.6e-11 Score=96.82 Aligned_cols=50 Identities=8% Similarity=0.049 Sum_probs=44.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh-----------HHHHHHHHHHHHHhHH
Q 029971 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER-----------SEESIEAAFEKLLMTS 111 (184)
Q Consensus 62 ~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~-----------~~~~IeaAYD~Ilm~~ 111 (184)
.|+|++|||+++|+.+|||+||++|+++||||+. .+.+|+.||+.|....
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~ 177 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQG 177 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHH
Confidence 6999999999999999999999999999999952 4679999999766543
No 30
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=98.99 E-value=3.4e-10 Score=91.27 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=45.0
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCChh-------------HHHHHHHHHHHHHhHHHHH
Q 029971 63 DPYKRLGISPYA--SEEEIWGSRNFLLEQYTGHER-------------SEESIEAAFEKLLMTSFRR 114 (184)
Q Consensus 63 dPYevLGVs~~A--S~dEIk~Ayr~L~~qyh~D~~-------------~~~~IeaAYD~Ilm~~l~~ 114 (184)
|||++|||++++ +.+||++||++|+++||||.. ....|+.||+.+.....|.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~ 68 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA 68 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence 799999999999 999999999999999999952 4679999999776654443
No 31
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=98.93 E-value=1.4e-09 Score=90.30 Aligned_cols=54 Identities=11% Similarity=0.048 Sum_probs=45.1
Q ss_pred cCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCChh-------------HHHHHHHHHHHHHhHHHHH
Q 029971 61 VWDPYKRLGISPY--ASEEEIWGSRNFLLEQYTGHER-------------SEESIEAAFEKLLMTSFRR 114 (184)
Q Consensus 61 ~~dPYevLGVs~~--AS~dEIk~Ayr~L~~qyh~D~~-------------~~~~IeaAYD~Ilm~~l~~ 114 (184)
..|+|++|||+++ ++.+||++|||+|.++||||.. ...+|+.||+.|.....|.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~ 110 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG 110 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 4699999999997 7999999999999999999953 2368999999776654443
No 32
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.2e-09 Score=76.50 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=45.7
Q ss_pred CCcCCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCh----hHHHHHHHHHHHHHhH
Q 029971 59 IKVWDPYKRLGISPY---ASEEEIWGSRNFLLEQYTGHE----RSEESIEAAFEKLLMT 110 (184)
Q Consensus 59 m~~~dPYevLGVs~~---AS~dEIk~Ayr~L~~qyh~D~----~~~~~IeaAYD~Ilm~ 110 (184)
|+.+..|++|||+++ ++.+||+++||+|..++|||+ ....+|+.|+|.+..+
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWE 59 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 556788999999999 999999999999999999884 4678999999976553
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.87 E-value=4e-10 Score=105.10 Aligned_cols=57 Identities=25% Similarity=0.213 Sum_probs=33.6
Q ss_pred CCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCChh--------HHHHHHHHHHHHHhHHHHHh
Q 029971 59 IKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHER--------SEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 59 m~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~--------~~~~IeaAYD~Ilm~~l~~R 115 (184)
....|||++|||+++||.+|||+|||+|+++||||.. .+.+|++||+.|.....|+.
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~ 82 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 82 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHH
Confidence 3468999999999999999999999999999999964 46699999998877665554
No 34
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=98.79 E-value=4.7e-09 Score=85.59 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=47.6
Q ss_pred CCCcCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCh-----hHHHHHHHHHHHHHhHHHHHh
Q 029971 58 RIKVWDPYKRL------GISP-YASEEEIWGSRNFLLEQYTGHE-----RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 58 rm~~~dPYevL------GVs~-~AS~dEIk~Ayr~L~~qyh~D~-----~~~~~IeaAYD~Ilm~~l~~R 115 (184)
+-...|+|++| |+.+ +|+.+||++||++|+++||||. +.+.+|+.||+.+.....|..
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~ 76 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQ 76 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHH
Confidence 33458999999 4655 9999999999999999999996 467899999997776555444
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.72 E-value=1.7e-05 Score=65.45 Aligned_cols=54 Identities=30% Similarity=0.296 Sum_probs=44.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCh-----------hHHHHHHHHHHHHHhHHHHHh
Q 029971 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHE-----------RSEESIEAAFEKLLMTSFRRR 115 (184)
Q Consensus 62 ~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~-----------~~~~~IeaAYD~Ilm~~l~~R 115 (184)
.+.|++||+.+.++.+||+++|++++.++|||. +.+.+|.+||+.+.....+++
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~ 446 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKK 446 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC--
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHh
Confidence 488999999999999999999999999999883 246689999997766555444
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=93.09 E-value=0.042 Score=50.52 Aligned_cols=44 Identities=11% Similarity=-0.038 Sum_probs=37.7
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCChhHHHHHHHHHH
Q 029971 62 WDPYKRLGISPYASE--EEIWGSRNFLLEQYTGHERSEESIEAAFE 105 (184)
Q Consensus 62 ~dPYevLGVs~~AS~--dEIk~Ayr~L~~qyh~D~~~~~~IeaAYD 105 (184)
.|+|++||++-++.. .+|++|||+|+++.+++++..+-|+.|+.
T Consensus 629 ~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~~~r~~lvd~a~~ 674 (681)
T 2pzi_A 629 ASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQRHRYTLVDMANK 674 (681)
T ss_dssp CSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CCCcccCCCCCChHHHHHHHHHHHHHHHHhCCChHHHHHHHHHhcc
Confidence 459999999777777 78999999999999988888778887775
No 37
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved unknown protein, structural genomics, PSI; NMR {Rhodopseudomonas palustris} SCOP: a.282.1.1
Probab=39.78 E-value=27 Score=27.29 Aligned_cols=59 Identities=22% Similarity=0.331 Sum_probs=43.2
Q ss_pred CcCCcccccCCCCCCCHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHhHHHHHhhhhccchhHhhh
Q 029971 60 KVWDPYKRLGISPYASEEEIWGSRNFLLEQ--YTGHERSEESIEAAFEKLLMTSFRRRKKEKINLKSRLK 127 (184)
Q Consensus 60 ~~~dPYevLGVs~~AS~dEIk~Ayr~L~~q--yh~D~~~~~~IeaAYD~Ilm~~l~~R~~Gki~v~~~IR 127 (184)
+--|-.+.|||..+ -.++++|+++ |++|..--++.|-+.-+-+|++|. ..|. +||.+++
T Consensus 69 SIVDLmKlLglDsS------l~~RkeLA~eL~~~~~~~dSA~mNiwLHk~vm~kLa--~NGG-kvP~~l~ 129 (130)
T 2gqb_A 69 SIVDLMKALDIDSS------LSARKELAKELGYSGDMNDSASMNIWLHKQVMSKLV--ANGG-KLPPEIK 129 (130)
T ss_dssp CHHHHHHHTCCCCS------HHHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHHHG--GGSE-ECCTTCC
T ss_pred HHHHHHHHhCCCcc------HHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHH--HhCC-CCChhhc
Confidence 34577899999766 3578889887 457887788899899989999887 3443 2555443
No 38
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=38.45 E-value=25 Score=27.76 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=32.6
Q ss_pred CCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCC
Q 029971 56 FSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGH 93 (184)
Q Consensus 56 Fprm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D 93 (184)
+|-....-.+.+|-|...-+.+|++++-..++.|+|||
T Consensus 26 ~P~~~~~~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~ 63 (138)
T 1qqr_A 26 RPGLKLTKLLKTLAIGDTITSQELLAQAQSILNKNHPG 63 (138)
T ss_dssp CTTBCCCEEEEEECTTCEEEHHHHHHHHHHHHHHHSTT
T ss_pred ccchhhhhhhcccccCcccCHHHHHHHHHHHHHhcCCC
Confidence 55553344589999999999999999999999999998
No 39
>2wjv_D Regulator of nonsense transcripts 2; hydrolase, zinc-finger, ATP-binding, RNA-binding, nonsense-M mRNA decay, nucleotide-binding, metal-binding; 2.85A {Homo sapiens}
Probab=28.75 E-value=36 Score=24.68 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=19.3
Q ss_pred ChhHHHHHHHHHHHHHhHHHHHhhhh
Q 029971 93 HERSEESIEAAFEKLLMTSFRRRKKE 118 (184)
Q Consensus 93 D~~~~~~IeaAYD~Ilm~~l~~R~~G 118 (184)
+.+..++.+.+|++++.+++..|+..
T Consensus 5 ~~~ed~eFdre~~kmm~eS~~sRk~e 30 (97)
T 2wjv_D 5 PCVEDEDFIQALDKMMLENLQQRSGE 30 (97)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CcHhHHHHHHHHHHHHHHHHHHhhcc
Confidence 34456789999999999999998654
No 40
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=28.66 E-value=42 Score=25.57 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=14.6
Q ss_pred CCCCCCCcCCcccccCCCCCCCHHHHHHHHHHHHHHh
Q 029971 54 PTFSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQY 90 (184)
Q Consensus 54 ~~Fprm~~~dPYevLGVs~~AS~dEIk~Ayr~L~~qy 90 (184)
--|--|+.+|||-.- .+||+++-+++..-|
T Consensus 18 ~~~~~ms~~DPF~~V-------k~EVq~sl~~l~~l~ 47 (130)
T 4dnd_A 18 LYFQSMSLEDPFFVV-------RGEVQKAVNTARGLY 47 (130)
T ss_dssp ---------CCHHHH-------HHHHHHHHHHHHHHH
T ss_pred eeeecCCCCCCcHHH-------HHHHHHHHHHHHHHH
Confidence 345457788999763 578888877755544
No 41
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=27.07 E-value=57 Score=29.81 Aligned_cols=36 Identities=14% Similarity=0.267 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhHHHHHhhh
Q 029971 74 ASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKK 117 (184)
Q Consensus 74 AS~dEIk~Ayr~L~~qyh~D~~~~~~IeaAYD~Ilm~~l~~R~~ 117 (184)
.|.+||++|+..+ |++..+.|+.||+.|. ++.++|+
T Consensus 74 vs~~ei~~A~~~l------~~~~~~ai~~A~~~I~--~fh~~Q~ 109 (423)
T 4gic_A 74 LPRDVLEAAWQAL------PAEQAKALREAAERIR--AYAERQK 109 (423)
T ss_dssp ECHHHHHHHHHTS------CHHHHHHHHHHHHHHH--HHHHHHC
T ss_pred cCHHHHHHHHhhC------CHHHHHHHHHHHHHHH--HHHHhcc
Confidence 4789999998877 7778889999999984 4555544
No 42
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=27.01 E-value=63 Score=29.65 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhHHHHHhhh
Q 029971 74 ASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRKK 117 (184)
Q Consensus 74 AS~dEIk~Ayr~L~~qyh~D~~~~~~IeaAYD~Ilm~~l~~R~~ 117 (184)
-|.+||++||.++ |++..+.|+.|++.| +++.++|+
T Consensus 68 Vs~~ei~~A~~~~------~~~~~~ai~~A~~nI--~~fH~~Q~ 103 (434)
T 1kae_A 68 VSAEEIAAASERL------SDELKQAMAVAVKNI--ETFHTAQK 103 (434)
T ss_dssp CCHHHHHHHHHHS------CHHHHHHHHHHHHHH--HHHHHTTC
T ss_pred cCHHHHHHHHHhC------CHHHHHHHHHHHHHH--HHHHHHhc
Confidence 4789999999887 788899999999998 45555554
No 43
>1ozj_A SMAD 3; MAD homology domain 1, DNA recognition, TGF-beta signaling, zinc-binding module, transcription/DNA complex; 2.40A {Homo sapiens} SCOP: d.164.1.1 PDB: 1mhd_A*
Probab=21.56 E-value=57 Score=25.68 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=29.6
Q ss_pred cccCCCCCC----CHHHHHHHHHHHHHHhCCChhHHHHHHHHHH
Q 029971 66 KRLGISPYA----SEEEIWGSRNFLLEQYTGHERSEESIEAAFE 105 (184)
Q Consensus 66 evLGVs~~A----S~dEIk~Ayr~L~~qyh~D~~~~~~IeaAYD 105 (184)
+.||...+. +++..++|...|+++.+. ...++.++.|-+
T Consensus 14 ~ll~~~~~~~~~~~e~~~~kai~sLvKkLK~-~~~Le~L~~AV~ 56 (144)
T 1ozj_A 14 RLLGWKKGEQNGQEEKWCEKAVKSLVKKLKK-TGQLDELEKAIT 56 (144)
T ss_dssp HHHTSCCCSCCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHhhhccCCCcchHHHHHHHHHHHHHHhcc-cccHHHHHHHHh
Confidence 567888766 667788999999888876 556777777766
No 44
>3b0c_W CENP-W, centromere protein W; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_W* 3vh5_W 3vh6_W
Probab=20.97 E-value=73 Score=21.61 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=16.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCC
Q 029971 72 PYASEEEIWGSRNFLLEQYTG 92 (184)
Q Consensus 72 ~~AS~dEIk~Ayr~L~~qyh~ 92 (184)
..-+.++|+.|-+.++++|.|
T Consensus 56 KTI~~~dI~~A~~~ll~k~~~ 76 (76)
T 3b0c_W 56 KIIKPEHTIAAAKVILKKSRG 76 (76)
T ss_dssp SSBCHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHHHhCC
Confidence 345678899999999988875
No 45
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.75 E-value=1.8e+02 Score=24.47 Aligned_cols=55 Identities=9% Similarity=0.009 Sum_probs=37.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhHHHHHhh
Q 029971 62 WDPYKRLGISPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRRK 116 (184)
Q Consensus 62 ~dPYevLGVs~~AS~dEIk~Ayr~L~~qyh~D~~~~~~IeaAYD~Ilm~~l~~R~ 116 (184)
+++|+.||=.++-+.+-+.+--....++..+|...+.+.++-=|..+++=++.++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rd~~l~~~~~~~~ 314 (319)
T 2dpo_A 260 KRVLKSFGSIPEFSGATVEKVNQAMCKKVPADPEHLAARREWRDECLKRLAKLKR 314 (319)
T ss_dssp HHHHHTCCCCCCCCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 4677888876777776666655556566666677777777777877776555443
Done!