Query 029984
Match_columns 184
No_of_seqs 205 out of 1969
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:29:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029984.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029984hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tq1_A AT5G66040, senescence-a 100.0 8.2E-29 2.8E-33 176.6 10.8 116 69-184 14-129 (129)
2 3iwh_A Rhodanese-like domain p 100.0 4.5E-29 1.5E-33 171.4 7.4 99 73-184 2-102 (103)
3 3gk5_A Uncharacterized rhodane 99.9 1.4E-27 4.7E-32 165.3 10.9 98 73-184 4-101 (108)
4 3foj_A Uncharacterized protein 99.9 4.4E-28 1.5E-32 165.4 7.4 97 73-182 2-100 (100)
5 3eme_A Rhodanese-like domain p 99.9 5E-28 1.7E-32 166.0 7.6 99 73-184 2-102 (103)
6 1gmx_A GLPE protein; transfera 99.9 7.2E-27 2.5E-31 161.5 9.5 99 72-183 4-103 (108)
7 3hix_A ALR3790 protein; rhodan 99.9 5.5E-27 1.9E-31 161.7 8.4 94 79-183 2-98 (106)
8 3d1p_A Putative thiosulfate su 99.9 3E-26 1E-30 165.1 12.1 115 69-184 19-138 (139)
9 3ilm_A ALR3790 protein; rhodan 99.9 2.2E-26 7.4E-31 166.5 9.7 98 75-183 2-102 (141)
10 2hhg_A Hypothetical protein RP 99.9 6.5E-26 2.2E-30 163.2 11.2 103 70-184 19-133 (139)
11 1qxn_A SUD, sulfide dehydrogen 99.9 4.3E-26 1.5E-30 164.2 9.8 104 71-184 21-129 (137)
12 1wv9_A Rhodanese homolog TT165 99.9 2.5E-26 8.5E-31 155.0 4.5 92 74-179 3-94 (94)
13 3flh_A Uncharacterized protein 99.9 1.5E-25 5.1E-30 158.6 8.6 99 73-184 15-119 (124)
14 3nhv_A BH2092 protein; alpha-b 99.9 2E-25 7E-30 161.9 7.9 100 73-184 16-120 (144)
15 2k0z_A Uncharacterized protein 99.9 3.5E-25 1.2E-29 153.6 6.4 87 85-184 14-102 (110)
16 1urh_A 3-mercaptopyruvate sulf 99.9 3.6E-24 1.2E-28 170.7 10.9 140 45-184 114-278 (280)
17 1e0c_A Rhodanese, sulfurtransf 99.9 6.6E-24 2.2E-28 168.4 11.1 139 45-184 109-271 (271)
18 1rhs_A Sulfur-substituted rhod 99.9 9.4E-24 3.2E-28 169.7 11.4 139 45-183 122-287 (296)
19 2fsx_A RV0390, COG0607: rhodan 99.9 4.3E-24 1.5E-28 155.5 8.3 110 72-184 4-139 (148)
20 3hzu_A Thiosulfate sulfurtrans 99.9 2.2E-23 7.6E-28 169.3 13.1 139 45-184 139-308 (318)
21 1uar_A Rhodanese; sulfurtransf 99.9 2.1E-23 7.2E-28 166.6 12.3 140 45-184 107-282 (285)
22 3olh_A MST, 3-mercaptopyruvate 99.9 2.2E-23 7.5E-28 168.2 11.3 139 44-182 136-299 (302)
23 1t3k_A Arath CDC25, dual-speci 99.9 3.5E-24 1.2E-28 156.7 5.4 106 71-184 26-141 (152)
24 1e0c_A Rhodanese, sulfurtransf 99.9 5.4E-23 1.8E-27 163.1 12.1 113 72-184 8-129 (271)
25 3aay_A Putative thiosulfate su 99.9 8.3E-23 2.8E-27 162.5 11.9 139 45-184 105-275 (277)
26 3i2v_A Adenylyltransferase and 99.9 1.7E-23 5.7E-28 148.0 6.8 106 74-183 2-124 (127)
27 3g5j_A Putative ATP/GTP bindin 99.9 2.8E-23 9.5E-28 147.9 7.9 103 73-178 5-130 (134)
28 2jtq_A Phage shock protein E; 99.9 1.3E-23 4.6E-28 138.9 5.1 77 88-177 2-80 (85)
29 1vee_A Proline-rich protein fa 99.9 3.2E-23 1.1E-27 148.5 6.6 107 72-184 4-124 (134)
30 1urh_A 3-mercaptopyruvate sulf 99.9 1.4E-22 4.9E-27 161.4 11.0 111 73-183 4-133 (280)
31 3hzu_A Thiosulfate sulfurtrans 99.9 2.3E-22 7.7E-27 163.3 11.9 113 72-184 39-159 (318)
32 3tp9_A Beta-lactamase and rhod 99.9 1.7E-22 6E-27 171.8 10.8 120 46-184 354-474 (474)
33 1yt8_A Thiosulfate sulfurtrans 99.9 4.3E-22 1.5E-26 172.0 12.8 128 45-184 348-477 (539)
34 3aay_A Putative thiosulfate su 99.9 4.9E-22 1.7E-26 158.0 10.4 112 73-184 6-125 (277)
35 1rhs_A Sulfur-substituted rhod 99.9 1.8E-21 6.3E-26 156.3 12.7 113 72-184 7-142 (296)
36 1c25_A CDC25A; hydrolase, cell 99.9 9.3E-22 3.2E-26 144.8 9.5 102 70-182 20-145 (161)
37 1qb0_A Protein (M-phase induce 99.9 2.1E-21 7.3E-26 149.1 11.1 102 70-182 41-167 (211)
38 3olh_A MST, 3-mercaptopyruvate 99.9 3.7E-21 1.3E-25 155.1 12.9 115 70-184 19-157 (302)
39 1uar_A Rhodanese; sulfurtransf 99.9 5.4E-22 1.9E-26 158.4 7.9 111 73-183 8-126 (285)
40 2a2k_A M-phase inducer phospha 99.9 2.3E-21 7.9E-26 144.6 10.6 102 70-182 21-147 (175)
41 2wlr_A Putative thiosulfate su 99.9 3E-21 1E-25 162.2 11.8 141 44-184 229-406 (423)
42 2vsw_A Dual specificity protei 99.9 8.5E-22 2.9E-26 143.8 7.1 110 72-181 3-130 (153)
43 2eg4_A Probable thiosulfate su 99.9 1.6E-21 5.6E-26 151.3 8.9 99 74-184 122-230 (230)
44 4f67_A UPF0176 protein LPG2838 99.8 8.8E-21 3E-25 149.9 11.4 105 70-180 119-224 (265)
45 2j6p_A SB(V)-AS(V) reductase; 99.8 5.1E-21 1.7E-25 139.8 9.0 103 72-182 4-120 (152)
46 3op3_A M-phase inducer phospha 99.8 1.2E-20 4.2E-25 145.1 11.0 98 71-179 55-177 (216)
47 2ouc_A Dual specificity protei 99.8 3.7E-21 1.3E-25 138.0 7.4 108 74-183 2-137 (142)
48 1okg_A Possible 3-mercaptopyru 99.8 4.4E-21 1.5E-25 158.8 8.8 110 72-183 13-142 (373)
49 2wlr_A Putative thiosulfate su 99.8 9.2E-21 3.2E-25 159.2 10.3 112 73-184 124-250 (423)
50 1okg_A Possible 3-mercaptopyru 99.8 9.3E-22 3.2E-26 162.9 3.9 99 85-183 172-293 (373)
51 1yt8_A Thiosulfate sulfurtrans 99.8 1.3E-20 4.4E-25 162.8 10.5 101 72-183 6-109 (539)
52 3f4a_A Uncharacterized protein 99.8 4.9E-21 1.7E-25 142.3 4.0 108 70-183 28-157 (169)
53 1hzm_A Dual specificity protei 99.8 2.6E-20 8.9E-25 135.9 5.8 105 72-178 15-142 (154)
54 3ics_A Coenzyme A-disulfide re 99.8 1E-19 3.6E-24 158.2 8.7 94 73-179 489-582 (588)
55 3tg1_B Dual specificity protei 99.8 3.4E-19 1.2E-23 130.8 9.9 105 70-179 8-143 (158)
56 3ntd_A FAD-dependent pyridine 99.8 3.8E-20 1.3E-24 159.9 5.2 91 75-179 475-565 (565)
57 3utn_X Thiosulfate sulfurtrans 99.8 3E-18 1E-22 139.3 11.8 108 74-181 185-319 (327)
58 2eg4_A Probable thiosulfate su 99.8 1.5E-18 5.1E-23 134.5 7.8 92 86-183 5-102 (230)
59 3r2u_A Metallo-beta-lactamase 99.7 1.5E-19 5E-24 153.7 0.0 86 80-177 379-465 (466)
60 3tp9_A Beta-lactamase and rhod 99.7 1.6E-18 5.5E-23 147.4 4.3 121 51-183 247-371 (474)
61 2gwf_A Ubiquitin carboxyl-term 99.7 1.9E-17 6.4E-22 121.5 8.6 110 71-182 18-149 (157)
62 1whb_A KIAA0055; deubiqutinati 99.7 1.8E-17 6.3E-22 121.4 8.6 112 69-182 11-144 (157)
63 3utn_X Thiosulfate sulfurtrans 99.7 6.6E-17 2.2E-21 131.4 11.7 112 71-183 26-159 (327)
64 3r2u_A Metallo-beta-lactamase 99.4 2.5E-13 8.6E-18 115.3 7.9 81 85-176 294-375 (466)
65 2f46_A Hypothetical protein; s 98.3 2.7E-06 9.3E-11 61.5 7.5 83 76-163 31-129 (156)
66 4erc_A Dual specificity protei 95.9 0.014 4.8E-07 40.9 5.5 83 77-163 25-117 (150)
67 2img_A Dual specificity protei 95.1 0.036 1.2E-06 38.6 5.2 83 76-162 25-117 (151)
68 1v8c_A MOAD related protein; r 94.1 0.0072 2.5E-07 44.1 -0.5 22 88-113 122-143 (168)
69 2nt2_A Protein phosphatase sli 94.0 0.092 3.1E-06 36.6 5.2 80 80-162 22-109 (145)
70 1xri_A AT1G05000; structural g 93.9 0.11 3.9E-06 36.2 5.5 85 78-163 24-120 (151)
71 1fpz_A Cyclin-dependent kinase 93.5 0.2 6.8E-06 37.3 6.5 83 76-162 60-162 (212)
72 2hcm_A Dual specificity protei 93.4 0.099 3.4E-06 37.2 4.6 80 82-163 32-118 (164)
73 1yz4_A DUSP15, dual specificit 92.9 0.2 6.8E-06 35.4 5.5 81 82-163 28-113 (160)
74 1ywf_A Phosphotyrosine protein 92.6 0.58 2E-05 36.9 8.4 42 72-113 53-101 (296)
75 3ezz_A Dual specificity protei 92.6 0.28 9.5E-06 33.9 5.9 80 82-162 24-109 (144)
76 1wrm_A Dual specificity phosph 92.1 0.25 8.5E-06 35.2 5.2 80 82-162 27-111 (165)
77 2r0b_A Serine/threonine/tyrosi 92.1 0.53 1.8E-05 32.8 6.9 85 79-163 25-119 (154)
78 2wgp_A Dual specificity protei 91.6 0.35 1.2E-05 35.4 5.6 80 82-163 46-132 (190)
79 3rgo_A Protein-tyrosine phosph 91.5 0.25 8.5E-06 34.5 4.5 81 79-163 19-118 (157)
80 3f81_A Dual specificity protei 90.7 0.36 1.2E-05 34.8 4.9 81 82-163 48-144 (183)
81 2esb_A Dual specificity protei 90.7 0.57 1.9E-05 34.2 6.0 80 82-163 40-126 (188)
82 3s4e_A Dual specificity protei 90.3 0.5 1.7E-05 32.7 5.2 80 82-163 24-110 (144)
83 2g6z_A Dual specificity protei 90.0 0.53 1.8E-05 35.3 5.4 77 85-162 29-111 (211)
84 2y96_A Dual specificity phosph 87.8 2.7 9.1E-05 31.4 8.0 28 135-162 137-167 (219)
85 2pq5_A Dual specificity protei 87.6 2.2 7.4E-05 31.5 7.3 27 136-162 130-159 (205)
86 3s4o_A Protein tyrosine phosph 86.9 4.4 0.00015 28.1 8.4 28 136-163 108-138 (167)
87 3emu_A Leucine rich repeat and 86.6 0.7 2.4E-05 32.7 3.9 29 135-163 85-116 (161)
88 3cm3_A Late protein H1, dual s 85.1 1.3 4.5E-05 31.7 4.8 28 136-163 107-137 (176)
89 2i6j_A Ssoptp, sulfolobus solf 83.8 1.7 5.9E-05 30.1 4.9 23 77-99 18-41 (161)
90 3rz2_A Protein tyrosine phosph 83.7 3.6 0.00012 29.7 6.7 83 75-162 48-144 (189)
91 2jgn_A DBX, DDX3, ATP-dependen 83.5 1.9 6.7E-05 31.0 5.2 46 127-173 36-81 (185)
92 2q05_A Late protein H1, dual s 83.2 2.1 7.3E-05 31.2 5.3 75 88-163 75-154 (195)
93 2j16_A SDP-1, tyrosine-protein 81.3 2.4 8.1E-05 30.8 4.9 74 88-163 67-146 (182)
94 1zzw_A Dual specificity protei 78.6 2.7 9.2E-05 28.9 4.3 29 135-163 81-112 (149)
95 2hxp_A Dual specificity protei 76.4 3 0.0001 29.1 4.0 28 135-162 83-113 (155)
96 1yn9_A BVP, polynucleotide 5'- 76.2 17 0.00058 25.3 8.1 28 136-163 112-142 (169)
97 2e0t_A Dual specificity phosph 75.6 3.6 0.00012 28.3 4.3 28 136-163 84-114 (151)
98 1ohe_A CDC14B, CDC14B2 phospha 75.0 22 0.00076 28.4 9.3 80 78-162 209-297 (348)
99 3nme_A Ptpkis1 protein, SEX4 g 74.3 2.5 8.4E-05 33.2 3.4 86 77-162 29-134 (294)
100 1jzt_A Hypothetical 27.5 kDa p 72.3 15 0.00052 27.9 7.4 29 138-167 59-90 (246)
101 2rb4_A ATP-dependent RNA helic 71.9 5.4 0.00019 28.1 4.5 36 136-172 33-68 (175)
102 1t5i_A C_terminal domain of A 70.5 6.7 0.00023 27.6 4.8 45 127-173 22-66 (172)
103 2oud_A Dual specificity protei 69.9 4.6 0.00016 28.8 3.8 29 135-163 85-116 (177)
104 3gxh_A Putative phosphatase (D 69.3 25 0.00087 24.3 7.6 83 75-163 28-124 (157)
105 1fuk_A Eukaryotic initiation f 69.2 7.3 0.00025 27.1 4.7 46 126-173 20-65 (165)
106 2hjv_A ATP-dependent RNA helic 67.6 5 0.00017 27.9 3.5 36 137-173 35-70 (163)
107 3d3k_A Enhancer of mRNA-decapp 65.9 7.5 0.00026 29.9 4.5 29 138-167 86-117 (259)
108 2i4i_A ATP-dependent RNA helic 65.1 9.9 0.00034 30.3 5.3 47 126-173 265-311 (417)
109 3to5_A CHEY homolog; alpha(5)b 63.9 14 0.00048 25.1 5.2 42 135-176 10-51 (134)
110 3d3j_A Enhancer of mRNA-decapp 63.6 8.5 0.00029 30.4 4.5 29 138-167 133-164 (306)
111 4a29_A Engineered retro-aldol 63.6 19 0.00065 27.7 6.3 88 75-164 137-229 (258)
112 2o8n_A APOA-I binding protein; 62.9 8.9 0.0003 29.6 4.3 29 138-167 80-111 (265)
113 1rxd_A Protein tyrosine phosph 62.4 33 0.0011 23.1 10.0 86 72-162 24-123 (159)
114 2v1x_A ATP-dependent DNA helic 57.8 14 0.00049 31.7 5.2 37 136-173 266-302 (591)
115 2c46_A MRNA capping enzyme; ph 57.8 42 0.0014 25.2 7.3 84 75-162 67-169 (241)
116 3mmj_A MYO-inositol hexaphosph 56.8 7.7 0.00026 30.8 3.1 22 132-153 208-230 (314)
117 2p6n_A ATP-dependent RNA helic 55.7 12 0.00042 26.8 3.9 35 137-172 54-88 (191)
118 3eaq_A Heat resistant RNA depe 54.0 11 0.00036 27.6 3.3 36 137-173 31-66 (212)
119 2l17_A Synarsc, arsenate reduc 53.5 11 0.00038 25.6 3.2 35 139-173 6-41 (134)
120 3rss_A Putative uncharacterize 52.6 21 0.00072 30.1 5.3 46 136-182 51-109 (502)
121 4etn_A LMPTP, low molecular we 52.5 3.1 0.0001 30.4 0.1 39 137-176 34-77 (184)
122 3v0d_A Voltage-sensor containi 51.6 13 0.00046 29.7 3.7 83 76-162 51-146 (339)
123 4fak_A Ribosomal RNA large sub 51.4 21 0.00073 25.4 4.4 46 128-173 65-115 (163)
124 2p1z_A Phosphoribosyltransfera 47.8 25 0.00086 25.0 4.4 48 135-182 112-168 (180)
125 1jl3_A Arsenate reductase; alp 47.7 19 0.00064 24.6 3.6 36 138-173 4-40 (139)
126 3rh0_A Arsenate reductase; oxi 45.7 25 0.00084 24.5 4.0 35 138-172 21-56 (148)
127 3hh1_A Tetrapyrrole methylase 45.4 46 0.0016 21.7 5.2 93 71-170 17-116 (117)
128 3tsm_A IGPS, indole-3-glycerol 45.2 35 0.0012 26.3 5.2 88 75-164 153-245 (272)
129 3rof_A Low molecular weight pr 45.2 11 0.00038 26.6 2.1 38 138-175 7-49 (158)
130 1jf8_A Arsenate reductase; ptp 45.1 25 0.00087 23.7 3.9 36 138-173 4-40 (131)
131 1xti_A Probable ATP-dependent 45.0 31 0.0011 26.9 5.0 44 127-172 241-284 (391)
132 1d5r_A Phosphoinositide phosph 44.8 25 0.00086 27.6 4.4 71 87-161 58-137 (324)
133 2dy0_A APRT, adenine phosphori 44.7 26 0.0009 25.1 4.2 48 135-182 124-181 (190)
134 3czc_A RMPB; alpha/beta sandwi 43.6 59 0.002 21.0 5.5 26 138-163 19-49 (110)
135 3i32_A Heat resistant RNA depe 43.6 20 0.00069 27.9 3.6 44 127-172 19-62 (300)
136 1p8a_A Protein tyrosine phosph 42.9 3.5 0.00012 28.7 -0.9 38 138-175 5-43 (146)
137 2wns_A Orotate phosphoribosylt 42.3 36 0.0012 24.7 4.7 48 135-182 109-165 (205)
138 1to0_A Hypothetical UPF0247 pr 42.2 34 0.0012 24.4 4.3 48 126-173 59-111 (167)
139 3m3h_A OPRT, oprtase, orotate 42.1 36 0.0012 25.6 4.7 49 134-182 134-192 (234)
140 3nbm_A PTS system, lactose-spe 42.0 23 0.0008 23.2 3.2 29 135-163 4-36 (108)
141 3n0a_A Tyrosine-protein phosph 41.6 59 0.002 26.2 6.1 72 86-162 62-142 (361)
142 2wmy_A WZB, putative acid phos 41.4 17 0.00059 25.2 2.6 36 138-174 9-45 (150)
143 1oyw_A RECQ helicase, ATP-depe 41.2 21 0.00072 30.0 3.6 37 136-173 235-271 (523)
144 2d7d_A Uvrabc system protein B 39.8 39 0.0013 29.4 5.2 44 128-172 436-479 (661)
145 2yjt_D ATP-dependent RNA helic 45.9 6.1 0.00021 27.7 0.0 36 137-173 30-65 (170)
146 1wp9_A ATP-dependent RNA helic 39.2 40 0.0014 26.8 4.9 35 135-170 359-393 (494)
147 1c4o_A DNA nucleotide excision 39.1 26 0.00087 30.6 3.9 38 134-172 436-473 (664)
148 1i5e_A Uracil phosphoribosyltr 38.6 47 0.0016 24.4 4.8 31 137-167 124-157 (209)
149 3dez_A OPRT, oprtase, orotate 38.1 34 0.0012 25.9 4.0 49 134-182 146-204 (243)
150 2wja_A Putative acid phosphata 37.8 20 0.0007 25.5 2.6 35 139-174 28-63 (168)
151 1d1q_A Tyrosine phosphatase (E 37.7 9.1 0.00031 27.0 0.6 39 137-175 7-52 (161)
152 1vdm_A Purine phosphoribosyltr 37.3 27 0.00092 23.8 3.1 32 136-167 82-116 (153)
153 3fwz_A Inner membrane protein 37.2 40 0.0014 22.5 4.0 30 141-171 10-39 (140)
154 3kwp_A Predicted methyltransfe 36.9 1.1E+02 0.0038 23.7 6.9 106 71-183 27-141 (296)
155 1fpr_A Protein-tyrosine phosph 36.6 36 0.0012 26.1 4.0 20 134-153 201-221 (284)
156 2fek_A Low molecular weight pr 36.3 23 0.0008 25.1 2.6 36 138-174 23-59 (167)
157 1vch_A Phosphoribosyltransfera 35.9 36 0.0012 23.8 3.6 32 136-167 119-153 (175)
158 2b49_A Protein tyrosine phosph 35.9 38 0.0013 26.1 4.1 20 135-154 207-227 (287)
159 2yzk_A OPRT, oprtase, orotate 35.8 44 0.0015 23.6 4.1 47 136-182 105-160 (178)
160 1s2m_A Putative ATP-dependent 35.8 29 0.00098 27.3 3.4 45 127-173 249-293 (400)
161 1hv8_A Putative ATP-dependent 35.5 33 0.0011 26.4 3.7 38 135-173 236-273 (367)
162 3i5x_A ATP-dependent RNA helic 35.3 48 0.0016 27.7 4.9 38 135-173 337-377 (563)
163 4grz_A Tyrosine-protein phosph 35.2 46 0.0016 25.5 4.4 19 134-152 203-222 (288)
164 3pey_A ATP-dependent RNA helic 35.2 32 0.0011 26.8 3.6 37 136-173 242-278 (395)
165 3ohg_A Uncharacterized protein 35.1 35 0.0012 26.6 3.7 26 147-172 218-243 (285)
166 1tvm_A PTS system, galactitol- 34.9 37 0.0013 22.3 3.3 27 137-163 21-52 (113)
167 3fht_A ATP-dependent RNA helic 34.7 31 0.0011 27.1 3.5 36 136-172 265-300 (412)
168 1pdo_A Mannose permease; phosp 34.2 1E+02 0.0035 20.6 5.7 45 125-170 46-91 (135)
169 3k5w_A Carbohydrate kinase; 11 34.1 62 0.0021 27.1 5.3 49 131-181 40-101 (475)
170 3f41_A Phytase; tandem repeat, 34.1 28 0.00095 30.4 3.2 21 132-152 525-546 (629)
171 1zn8_A APRT, adenine phosphori 33.9 40 0.0014 23.7 3.6 32 135-166 118-152 (180)
172 1dku_A Protein (phosphoribosyl 33.8 50 0.0017 26.0 4.4 34 136-169 216-252 (317)
173 1vkr_A Mannitol-specific PTS s 33.6 42 0.0014 22.5 3.5 27 136-162 12-43 (125)
174 3t38_A Arsenate reductase; low 33.4 39 0.0013 25.1 3.6 37 136-172 80-117 (213)
175 2j0s_A ATP-dependent RNA helic 32.4 36 0.0012 26.9 3.5 36 137-173 276-311 (410)
176 3ipz_A Monothiol glutaredoxin- 32.4 56 0.0019 20.9 3.9 28 136-163 16-49 (109)
177 3i36_A Vascular protein tyrosi 31.8 56 0.0019 25.9 4.5 19 134-152 234-253 (342)
178 2geb_A Hypoxanthine-guanine ph 31.7 40 0.0014 24.0 3.4 32 136-167 97-131 (185)
179 3sqw_A ATP-dependent RNA helic 31.3 59 0.002 27.4 4.8 37 135-172 286-325 (579)
180 3eiq_A Eukaryotic initiation f 31.1 50 0.0017 25.9 4.2 46 126-173 270-315 (414)
181 1o6d_A Hypothetical UPF0247 pr 31.1 67 0.0023 22.8 4.3 49 126-175 54-107 (163)
182 1hgx_A HGXPRTASE, hypoxanthine 30.7 43 0.0015 23.7 3.4 32 136-167 94-128 (183)
183 1y0b_A Xanthine phosphoribosyl 30.3 48 0.0017 23.7 3.6 48 135-182 118-175 (197)
184 3h1g_A Chemotaxis protein CHEY 30.2 85 0.0029 19.8 4.6 8 155-162 23-30 (129)
185 3jx9_A Putative phosphoheptose 30.1 71 0.0024 22.7 4.4 32 133-164 74-107 (170)
186 1wd5_A Hypothetical protein TT 30.1 54 0.0018 23.7 3.9 32 136-167 119-153 (208)
187 1u9y_A RPPK;, ribose-phosphate 30.1 57 0.002 25.1 4.2 32 136-167 204-238 (284)
188 1g2q_A Adenine phosphoribosylt 29.7 51 0.0017 23.4 3.6 32 135-166 120-154 (187)
189 3b7o_A Tyrosine-protein phosph 29.7 59 0.002 25.4 4.2 20 134-153 236-256 (316)
190 1ufr_A TT1027, PYR mRNA-bindin 29.6 53 0.0018 23.1 3.7 32 136-167 95-130 (181)
191 4h3k_B RNA polymerase II subun 29.5 61 0.0021 24.1 3.9 29 139-168 27-56 (214)
192 3llv_A Exopolyphosphatase-rela 29.3 65 0.0022 21.2 4.0 29 142-171 10-38 (141)
193 1s4d_A Uroporphyrin-III C-meth 29.2 1.9E+02 0.0064 21.9 7.4 109 71-182 26-143 (280)
194 2db3_A ATP-dependent RNA helic 29.1 70 0.0024 25.8 4.8 32 140-172 303-334 (434)
195 1o5o_A Uracil phosphoribosyltr 28.8 74 0.0025 23.7 4.4 31 137-167 136-169 (221)
196 1y1l_A Arsenate reductase (ARS 28.7 48 0.0017 22.0 3.1 34 139-173 1-35 (124)
197 1jbe_A Chemotaxis protein CHEY 28.7 1.1E+02 0.0037 19.1 5.1 32 140-171 7-38 (128)
198 2l2q_A PTS system, cellobiose- 28.6 25 0.00084 22.9 1.6 28 136-163 3-34 (109)
199 1yfz_A Hypoxanthine-guanine ph 28.6 48 0.0016 24.0 3.4 32 136-167 117-151 (205)
200 1a3c_A PYRR, pyrimidine operon 27.8 58 0.002 22.8 3.6 32 136-167 97-132 (181)
201 1ao0_A Glutamine phosphoribosy 27.6 67 0.0023 26.5 4.4 33 136-168 337-372 (459)
202 2hc1_A Receptor-type tyrosine- 27.4 75 0.0026 24.4 4.4 18 135-152 216-234 (291)
203 2wul_A Glutaredoxin related pr 27.0 1.3E+02 0.0043 19.9 5.0 36 124-163 10-51 (118)
204 2lpm_A Two-component response 26.9 84 0.0029 20.7 4.1 37 139-175 10-46 (123)
205 1l1q_A Adenine phosphoribosylt 26.8 71 0.0024 22.6 4.0 32 135-166 115-151 (186)
206 1tc1_A Protein (hypoxanthine p 26.6 54 0.0019 24.2 3.4 32 136-167 102-136 (220)
207 3jux_A Protein translocase sub 26.5 49 0.0017 29.8 3.5 37 136-173 473-509 (822)
208 3mm4_A Histidine kinase homolo 26.5 97 0.0033 21.9 4.7 39 137-175 61-99 (206)
209 1pzm_A HGPRT, hypoxanthine-gua 26.2 58 0.002 23.8 3.4 32 136-167 117-151 (211)
210 1jln_A STEP-like ptpase, prote 26.0 75 0.0026 24.6 4.2 19 135-153 220-239 (297)
211 1e2b_A Enzyme IIB-cellobiose; 25.6 51 0.0017 21.3 2.7 26 138-163 4-33 (106)
212 1ecf_A Glutamine phosphoribosy 25.6 83 0.0028 26.4 4.7 32 136-167 358-392 (504)
213 3fpn_A Geobacillus stearotherm 25.5 1.2E+02 0.004 20.2 4.5 46 124-170 6-55 (119)
214 2aee_A OPRT, oprtase, orotate 25.3 66 0.0023 23.3 3.6 48 135-182 115-172 (211)
215 3eod_A Protein HNR; response r 25.2 1.3E+02 0.0043 18.8 4.8 24 139-162 9-32 (130)
216 2ybo_A Methyltransferase; SUMT 25.2 2E+02 0.0069 22.0 6.6 109 71-182 36-153 (294)
217 1v9s_A Uracil phosphoribosyltr 25.0 78 0.0027 23.3 3.9 31 137-167 123-156 (208)
218 2j48_A Two-component sensor ki 24.9 1.2E+02 0.004 18.2 4.7 8 155-162 39-46 (119)
219 2zfz_A Arginine repressor; DNA 24.3 71 0.0024 19.5 3.1 26 134-159 52-77 (79)
220 2fsf_A Preprotein translocase 24.2 88 0.003 28.3 4.7 38 135-173 439-476 (853)
221 1jdq_A TM006 protein, hypothet 24.2 1.4E+02 0.0049 18.9 5.5 38 126-163 42-79 (98)
222 3dah_A Ribose-phosphate pyroph 24.1 88 0.003 24.7 4.3 32 136-167 215-249 (319)
223 1b4b_A Arginine repressor; cor 23.8 61 0.0021 19.3 2.6 26 134-159 44-69 (71)
224 2b4a_A BH3024; flavodoxin-like 23.7 1.3E+02 0.0046 19.0 4.7 38 137-175 15-52 (138)
225 3e8x_A Putative NAD-dependent 23.7 99 0.0034 22.2 4.4 32 137-169 21-52 (236)
226 2e55_A Uracil phosphoribosyltr 23.7 74 0.0025 23.4 3.6 31 137-167 121-154 (208)
227 3s5j_B Ribose-phosphate pyroph 23.5 77 0.0026 25.1 3.9 32 136-167 212-246 (326)
228 1xxa_A ARGR, arginine represso 23.5 68 0.0023 19.6 2.8 26 135-160 48-73 (78)
229 3o8b_A HCV NS3 protease/helica 23.2 54 0.0019 28.7 3.1 37 136-173 395-431 (666)
230 3hvu_A Hypoxanthine phosphorib 22.9 90 0.0031 22.8 3.9 31 136-166 115-148 (204)
231 3lvj_C Sulfurtransferase TUSA; 22.9 1.3E+02 0.0046 18.1 5.4 38 126-163 26-63 (82)
232 2ywu_A Hypoxanthine-guanine ph 22.8 76 0.0026 22.6 3.4 31 136-166 94-127 (181)
233 3ipr_A PTS system, IIA compone 22.7 1.2E+02 0.0043 20.7 4.5 46 125-170 46-96 (150)
234 3h5i_A Response regulator/sens 22.1 1.4E+02 0.0047 19.1 4.5 24 139-162 7-30 (140)
235 8abp_A L-arabinose-binding pro 22.0 1.6E+02 0.0056 21.7 5.5 29 140-168 199-229 (306)
236 1qb7_A APRT, adenine phosphori 22.0 82 0.0028 23.4 3.6 32 135-166 136-170 (236)
237 3grc_A Sensor protein, kinase; 21.7 1.6E+02 0.0054 18.6 4.8 24 139-162 8-31 (140)
238 4ao6_A Esterase; hydrolase, th 21.5 75 0.0026 23.3 3.3 47 101-169 40-92 (259)
239 1w30_A PYRR bifunctional prote 21.4 91 0.0031 22.5 3.7 31 136-166 111-145 (201)
240 1p15_A Protein-tyrosine phosph 21.4 61 0.0021 24.3 2.8 19 135-153 174-193 (253)
241 3mtq_A Putative phosphoenolpyr 21.2 1.5E+02 0.0051 20.7 4.6 44 125-170 65-109 (159)
242 3lte_A Response regulator; str 21.1 1.5E+02 0.0052 18.4 4.5 23 140-162 9-31 (132)
243 1nkt_A Preprotein translocase 20.9 86 0.0029 28.7 4.0 38 135-173 458-495 (922)
244 3t6k_A Response regulator rece 20.9 1.7E+02 0.0058 18.6 4.8 7 156-162 43-49 (136)
245 2jbh_A Phosphoribosyltransfera 20.9 82 0.0028 23.2 3.4 31 136-166 133-166 (225)
246 2p5m_A Arginine repressor; alp 20.8 75 0.0026 19.6 2.7 26 134-159 56-81 (83)
247 3ohp_A Hypoxanthine phosphorib 20.8 86 0.0029 22.2 3.4 32 136-167 90-124 (177)
248 1ve2_A Uroporphyrin-III C-meth 20.7 2.5E+02 0.0085 20.4 8.1 108 71-182 14-129 (235)
249 3f6p_A Transcriptional regulat 20.6 1.6E+02 0.0055 18.2 4.6 7 156-162 41-47 (120)
250 1z5z_A Helicase of the SNF2/RA 20.6 93 0.0032 23.5 3.7 37 136-173 111-148 (271)
251 3lrt_A Ribose-phosphate pyroph 20.5 1E+02 0.0035 23.9 3.9 32 136-167 202-236 (286)
252 3lfh_A Manxa, phosphotransfera 20.4 1E+02 0.0034 21.1 3.5 43 126-170 49-93 (144)
253 3m4u_A Tyrosine specific prote 20.4 1.1E+02 0.0036 23.7 4.1 19 135-153 220-239 (306)
254 3o7m_A Hypoxanthine phosphorib 20.3 89 0.0031 22.3 3.4 31 136-166 93-126 (186)
255 2ehj_A Uracil phosphoribosyltr 20.3 84 0.0029 23.1 3.3 31 137-167 123-156 (208)
256 2der_A TRNA-specific 2-thiouri 20.3 70 0.0024 25.8 3.1 28 136-163 16-43 (380)
257 1fsg_A HGPRTASE, hypoxanthine- 20.3 87 0.003 23.2 3.4 31 136-166 141-174 (233)
258 4egs_A Ribose 5-phosphate isom 20.2 53 0.0018 23.5 2.1 38 137-175 34-76 (180)
259 2ps1_A Orotate phosphoribosylt 20.0 97 0.0033 22.8 3.6 31 136-166 124-157 (226)
260 1pav_A Hypothetical protein TA 20.0 1.1E+02 0.0039 18.1 3.4 39 125-163 21-59 (78)
No 1
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.96 E-value=8.2e-29 Score=176.61 Aligned_cols=116 Identities=67% Similarity=1.111 Sum_probs=102.1
Q ss_pred CCCCcccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCCh
Q 029984 69 VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (184)
Q Consensus 69 ~~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (184)
......++++++.++++++++|||||++.||..||||||+|||+..+...+.+.+.++++.....++++++|||||.+|.
T Consensus 14 ~~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~ 93 (129)
T 1tq1_A 14 SRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGG 93 (129)
T ss_dssp SCCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCS
T ss_pred cCCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCc
Confidence 44556789999999888778999999999999999999999998655555555666778887777889999999999999
Q ss_pred hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 149 RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 149 rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
||..+++.|.+.||+||++|+|||.+|..+|+|+++
T Consensus 94 rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (129)
T 1tq1_A 94 RSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129 (129)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred HHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999874
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.95 E-value=4.5e-29 Score=171.40 Aligned_cols=99 Identities=25% Similarity=0.409 Sum_probs=87.0
Q ss_pred cccCHHHHHHHHhCC--CeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhH
Q 029984 73 TSVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (184)
Q Consensus 73 ~~i~~~~~~~~~~~~--~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs 150 (184)
..++++++++.+.++ ++|||||++.||..||||||+|||++ .+......++++++||+||.+|.||
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivv~C~~G~rS 69 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCccc------------chhhhhhhhcCCCeEEEECCCCHHH
Confidence 357889998877543 88999999999999999999999984 3444556789999999999999999
Q ss_pred HHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 151 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 151 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
..++..|.+.||+++ .|.||+.+|+.+|+|+++
T Consensus 70 ~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 70 AKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence 999999999999755 689999999999999985
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.95 E-value=1.4e-27 Score=165.28 Aligned_cols=98 Identities=30% Similarity=0.448 Sum_probs=90.5
Q ss_pred cccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHH
Q 029984 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMM 152 (184)
Q Consensus 73 ~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~ 152 (184)
..++++++.+++++ ++|||||++.||..||||||+|||+ +.+......++++++||+||.+|.||..
T Consensus 4 ~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyC~~G~rs~~ 70 (108)
T 3gk5_A 4 RSINAADLYENIKA-YTVLDVREPFELIFGSIANSINIPI------------SELREKWKILERDKKYAVICAHGNRSAA 70 (108)
T ss_dssp CEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTCEECCH------------HHHHHHGGGSCTTSCEEEECSSSHHHHH
T ss_pred cEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCCEEcCH------------HHHHHHHHhCCCCCeEEEEcCCCcHHHH
Confidence 46888999988877 9999999999999999999999998 5667777888999999999999999999
Q ss_pred HHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 153 AATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 153 ~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
+++.|++.|| +|++|+||+.+|.++|.|+++
T Consensus 71 aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 71 AVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 9999999999 999999999999999999864
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.95 E-value=4.4e-28 Score=165.42 Aligned_cols=97 Identities=24% Similarity=0.389 Sum_probs=86.4
Q ss_pred cccCHHHHHHHHh--CCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhH
Q 029984 73 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (184)
Q Consensus 73 ~~i~~~~~~~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs 150 (184)
+.++++++.+++. ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivvyC~~g~rs 69 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMN------------SIPDNLNYFNDNETYYIICKAGGRS 69 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGSCTTSEEEEECSSSHHH
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhCCCCCcEEEEcCCCchH
Confidence 3578899998874 3589999999999999999999999984 3444556678999999999999999
Q ss_pred HHHHHHHHHccCCCeeeccccHHHHHhCCCCC
Q 029984 151 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 151 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~ 182 (184)
..+++.|++.|| +|++|+||+.+|.++|+|+
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 70 AQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 999999999999 8999999999999999986
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.95 E-value=5e-28 Score=165.96 Aligned_cols=99 Identities=25% Similarity=0.387 Sum_probs=87.6
Q ss_pred cccCHHHHHHHHh--CCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhH
Q 029984 73 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (184)
Q Consensus 73 ~~i~~~~~~~~~~--~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs 150 (184)
+.++++++.+++. ++++|||||++.||..||||||+|||+. .+......++++++||+||.+|.||
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~yC~~g~rs 69 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhCCCCCeEEEECCCChHH
Confidence 3578899998874 3589999999999999999999999984 3344455678999999999999999
Q ss_pred HHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 151 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 151 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
..+++.|.+.|| +|++|+||+.+|.++|+|+++
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 70 AKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 999999999999 899999999999999999974
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.94 E-value=7.2e-27 Score=161.48 Aligned_cols=99 Identities=30% Similarity=0.500 Sum_probs=88.5
Q ss_pred CcccCHHHHHHHHhC-CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhH
Q 029984 72 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs 150 (184)
...++++++.+++++ +.+|||||++.||..||||||+|||+ ..+......++++++|||||.+|.||
T Consensus 4 ~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyc~~g~rs 71 (108)
T 1gmx_A 4 FECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTN------------DTLGAFMRDNDFDTPVMVMCYHGNSS 71 (108)
T ss_dssp CEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCH------------HHHHHHHHHSCTTSCEEEECSSSSHH
T ss_pred ccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCH------------HHHHHHHHhcCCCCCEEEEcCCCchH
Confidence 346888999888875 48999999999999999999999998 45555566689999999999999999
Q ss_pred HHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 151 MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 151 ~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
..+++.|.+.||++|++|+||+.+|.++ +|++
T Consensus 72 ~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~ 103 (108)
T 1gmx_A 72 KGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAE 103 (108)
T ss_dssp HHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGG
T ss_pred HHHHHHHHHcCCceEEEecCCHHHHHHh-CCcc
Confidence 9999999999999999999999999998 8875
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.94 E-value=5.5e-27 Score=161.66 Aligned_cols=94 Identities=32% Similarity=0.554 Sum_probs=78.3
Q ss_pred HHHHHHh---CCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHHHHH
Q 029984 79 VAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAAT 155 (184)
Q Consensus 79 ~~~~~~~---~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~ 155 (184)
+++++++ ++++|||||++.||..||||||+|||+. ++.......++++++|||||.+|.||..+++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~ 70 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQAVN 70 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHHHH
Confidence 3455554 3489999999999999999999999994 3444445678899999999999999999999
Q ss_pred HHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 156 DLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 156 ~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
.|+..||+||++|+||+.+|+++|+|++
T Consensus 71 ~L~~~G~~~v~~l~GG~~~W~~~g~~~~ 98 (106)
T 3hix_A 71 LLRSAGFEHVSELKGGLAAWKAIGGPTE 98 (106)
T ss_dssp HHHHTTCSCEEECTTHHHHHHHTTCCEE
T ss_pred HHHHcCCcCEEEecCCHHHHHHCCCCCC
Confidence 9999999999999999999999999975
No 8
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3e-26 Score=165.09 Aligned_cols=115 Identities=23% Similarity=0.308 Sum_probs=95.8
Q ss_pred CCCCcccCHHHHHHHHh---CCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh--cCCCCCeEEEE
Q 029984 69 VGVPTSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVG 143 (184)
Q Consensus 69 ~~~~~~i~~~~~~~~~~---~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~ 143 (184)
......++++++.++++ ++++|||||++.||..||||||+|||+..+ ......+++.+...+. .++++++||||
T Consensus 19 ~~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ivvy 97 (139)
T 3d1p_A 19 VSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSH-PDAFALDPLEFEKQIGIPKPDSAKELIFY 97 (139)
T ss_dssp -CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTC-TTGGGSCHHHHHHHHSSCCCCTTSEEEEE
T ss_pred CCCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHh-hhhccCCHHHHHHHHhccCCCCCCeEEEE
Confidence 34556799999999886 458899999999999999999999998654 2333344555555554 35789999999
Q ss_pred cCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 144 CQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 144 c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
|.+|.||..++..|.+.||++|++|+||+.+|..+|+|+.+
T Consensus 98 C~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 98 CASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp CSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999864
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.93 E-value=2.2e-26 Score=166.52 Aligned_cols=98 Identities=31% Similarity=0.514 Sum_probs=87.3
Q ss_pred cCHHHHHHHHhC---CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHH
Q 029984 75 VPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (184)
Q Consensus 75 i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~ 151 (184)
|+++++.+++++ +++|||||++.||..||||||+|||+. ++.......++++++|||||.+|.||.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~rs~ 70 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTS 70 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChHHH
Confidence 678889888863 478999999999999999999999994 333444467889999999999999999
Q ss_pred HHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 152 MAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 152 ~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
.+++.|...||++|++|+||+.+|.++|+|++
T Consensus 71 ~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 102 (141)
T 3ilm_A 71 QAVNLLRSAGFEHVSELKGGLAAWKAIGGPTE 102 (141)
T ss_dssp HHHHHHHHTTCCSEEECTTHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCCEEEecCHHHHHHHCCCCcc
Confidence 99999999999999999999999999999985
No 10
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.93 E-value=6.5e-26 Score=163.18 Aligned_cols=103 Identities=27% Similarity=0.459 Sum_probs=88.1
Q ss_pred CCCcccCHHHHHHHHh--C-CCeEEEcCChhhHhc-CCCCCcEEeccccccCCCCCCCHHHHHHHH--------hcCCCC
Q 029984 70 GVPTSVPVRVAHELLQ--A-GHRYLDVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVS--------TRFRKH 137 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~--~-~~~liDvR~~~e~~~-ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~--------~~l~~~ 137 (184)
.....++++++.++++ + +++|||||++.||.. ||||||+|||+.. +.... ..++++
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~------------l~~~~~~~~~~~~~~~~~~ 86 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGM------------LEFWIDPQSPYAKPIFQED 86 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGG------------HHHHHCTTSTTCCGGGGSS
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHH------------HHHhcCccchhhhccCCCC
Confidence 3456789999999887 3 488999999999998 9999999999842 22211 235789
Q ss_pred CeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 138 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 138 ~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
++|||||.+|.||..+++.|++.||+||++|+||+.+|..+|+|+++
T Consensus 87 ~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 133 (139)
T 2hhg_A 87 KKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEA 133 (139)
T ss_dssp SEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC-
T ss_pred CeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeec
Confidence 99999999999999999999999999999999999999999999863
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.93 E-value=4.3e-26 Score=164.16 Aligned_cols=104 Identities=24% Similarity=0.380 Sum_probs=89.5
Q ss_pred CCcccCHHHHHHHHh-C-CCeEEEcCChhhHhc-CC--CCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcC
Q 029984 71 VPTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GH--ATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ 145 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~-~-~~~liDvR~~~e~~~-gh--IpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~ 145 (184)
....++++++.++++ + +++|||||++.||.. || ||||+|||+..+. + ......++++++|||||.
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~--------~--~~~~~~l~~~~~ivvyC~ 90 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLE--------P--LLAKSGLDPEKPVVVFCK 90 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSH--------H--HHHHHCCCTTSCEEEECC
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhh--------h--HHhhccCCCCCeEEEEcC
Confidence 455789999998887 4 489999999999999 99 9999999984210 1 113456789999999999
Q ss_pred CChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 146 SGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 146 ~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
+|.||..+++.|++.||+||++|+||+.+|.++|+|+++
T Consensus 91 ~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (137)
T 1qxn_A 91 TAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLD 129 (137)
T ss_dssp SSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEEC
T ss_pred CCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccc
Confidence 999999999999999999999999999999999999863
No 12
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.92 E-value=2.5e-26 Score=155.00 Aligned_cols=92 Identities=24% Similarity=0.304 Sum_probs=76.0
Q ss_pred ccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHHH
Q 029984 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMA 153 (184)
Q Consensus 74 ~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~ 153 (184)
.++++++.++++++.+|||||++.||..||||||+|+|+. .+......+++ ++||+||.+|.||..+
T Consensus 3 ~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gAi~ip~~------------~l~~~~~~l~~-~~ivvyC~~g~rs~~a 69 (94)
T 1wv9_A 3 KVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAEWVPLE------------KIQKGEHGLPR-RPLLLVCEKGLLSQVA 69 (94)
T ss_dssp EECGGGHHHHHHTTCEEEECCCC--CCSCCSSCCEECCHH------------HHTTTCCCCCS-SCEEEECSSSHHHHHH
T ss_pred cCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCCEECCHH------------HHHHHHHhCCC-CCEEEEcCCCChHHHH
Confidence 4677788888877899999999999999999999999983 34444556778 9999999999999999
Q ss_pred HHHHHHccCCCeeeccccHHHHHhCC
Q 029984 154 ATDLLNAGFAGITDIAGGFAAWRQNG 179 (184)
Q Consensus 154 ~~~L~~~G~~~v~~l~GG~~~W~~~g 179 (184)
++.|.+.||+ |++|+||+.+|.++|
T Consensus 70 ~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 70 ALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999999998 999999999998876
No 13
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.92 E-value=1.5e-25 Score=158.62 Aligned_cols=99 Identities=24% Similarity=0.288 Sum_probs=88.4
Q ss_pred cccCHHHHHHHHhC---CCeEEEcCChhhH-hcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCCh
Q 029984 73 TSVPVRVAHELLQA---GHRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (184)
Q Consensus 73 ~~i~~~~~~~~~~~---~~~liDvR~~~e~-~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (184)
..++++++.+++++ +++|||||++.|| ..||||||+|||+ +.+......++++++|||||.+|.
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~------------~~l~~~~~~l~~~~~ivvyC~~g~ 82 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPA------------KDLATRIGELDPAKTYVVYDWTGG 82 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCH------------HHHHHHGGGSCTTSEEEEECSSSS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCH------------HHHHHHHhcCCCCCeEEEEeCCCC
Confidence 45788899888764 3789999999998 9999999999998 566677778899999999999999
Q ss_pred h--HHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 149 R--SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 149 r--s~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
+ |..+++.|++.||+ |++|+||+.+|+.+|+|+.+
T Consensus 83 r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 83 TTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp CSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred chHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 8 89999999999997 99999999999999999753
No 14
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.92 E-value=2e-25 Score=161.90 Aligned_cols=100 Identities=24% Similarity=0.366 Sum_probs=85.9
Q ss_pred cccCHHHHHHHHhC---CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCC--
Q 029984 73 TSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 147 (184)
Q Consensus 73 ~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-- 147 (184)
..++++++.+++.+ +++|||||++.||..||||||+|||+..+. ......++++++|||||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~-----------~~~~~~l~~~~~ivvyC~~g~~ 84 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKIN-----------EDTTKRLSKEKVIITYCWGPAC 84 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCS-----------TTTTTTCCTTSEEEEECSCTTC
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHh-----------HHHHhhCCCCCeEEEEECCCCc
Confidence 34788899988875 378999999999999999999999985321 12344578899999999998
Q ss_pred hhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 148 KRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 148 ~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
.+|..+++.|+..|| +|++|+||+.+|.++|+|+++
T Consensus 85 ~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~ 120 (144)
T 3nhv_A 85 NGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEG 120 (144)
T ss_dssp CHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBS
T ss_pred cHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccC
Confidence 699999999999999 599999999999999999863
No 15
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.91 E-value=3.5e-25 Score=153.58 Aligned_cols=87 Identities=18% Similarity=0.319 Sum_probs=76.4
Q ss_pred hCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHHccC
Q 029984 85 QAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGF 162 (184)
Q Consensus 85 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~ 162 (184)
.++++|||||++.||..||||||+|||+. .+..... .++++++|||||.+|.||..+++.|++.||
T Consensus 14 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~------------~l~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~ 81 (110)
T 2k0z_A 14 FNDFIVVDVRELDEYEELHLPNATLISVN------------DQEKLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGY 81 (110)
T ss_dssp GGGSEEEEEECHHHHHHSBCTTEEEEETT------------CHHHHHHHHHSCSSSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhcccCCCCEEEEEeCCCchHHHHHHHHHHCCC
Confidence 45689999999999999999999999984 2222232 378899999999999999999999999999
Q ss_pred CCeeeccccHHHHHhCCCCCCC
Q 029984 163 AGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 163 ~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
++ ++|+||+.+|.++|+|+++
T Consensus 82 ~~-~~l~GG~~~W~~~g~p~~~ 102 (110)
T 2k0z_A 82 TP-YYLEGNVYDFEKYGFRMVY 102 (110)
T ss_dssp CC-EEEESCGGGTTTTTCCCBC
T ss_pred CE-EEecCCHHHHHHCCCcEec
Confidence 99 9999999999999999863
No 16
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.91 E-value=3.6e-24 Score=170.74 Aligned_cols=140 Identities=21% Similarity=0.341 Sum_probs=102.8
Q ss_pred eeeecCCCccccccccc-cCcccc---------cCCCCcccCHHHHHHHHh-CCCeEEEcCChhhH-----------hcC
Q 029984 45 NIGFISSKILSFCPKAS-LRGNLE---------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-----------SAG 102 (184)
Q Consensus 45 ~~~~l~~~~~~~~~~~~-~~~~~~---------~~~~~~~i~~~~~~~~~~-~~~~liDvR~~~e~-----------~~g 102 (184)
.+..++|++..|..... ...... .......++.+++.+++. ++++|||||++.|| ..|
T Consensus 114 ~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~g 193 (280)
T 1urh_A 114 KVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRG 193 (280)
T ss_dssp CEEEETTHHHHHHHTTCCCBBSCCCCCCCCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSS
T ss_pred CEEEecCCHHHHHHCCCcccCCCCCCCCCccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCc
Confidence 46889999999975221 111000 001123588999988876 45899999999999 689
Q ss_pred CCCCcEEeccccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHh-CC
Q 029984 103 HATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQ-NG 179 (184)
Q Consensus 103 hIpgAi~ip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~-~g 179 (184)
|||||+|||+..+...+.+.+.+.+...+. .++++++||+||.+|.||..++..|..+||+||++|+|||.+|.. .|
T Consensus 194 hIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~ 273 (280)
T 1urh_A 194 HIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARAD 273 (280)
T ss_dssp SCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC------
T ss_pred cCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCC
Confidence 999999999976665566667777777665 468899999999999999999999999999999999999999987 49
Q ss_pred CCCCC
Q 029984 180 LPTEP 184 (184)
Q Consensus 180 ~p~~~ 184 (184)
+|+++
T Consensus 274 ~Pv~~ 278 (280)
T 1urh_A 274 LPVEP 278 (280)
T ss_dssp -----
T ss_pred CCcee
Confidence 99874
No 17
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.90 E-value=6.6e-24 Score=168.38 Aligned_cols=139 Identities=18% Similarity=0.327 Sum_probs=106.2
Q ss_pred eeeecCCCccccccccc-cCccc-c--------cCCCCcccCHHHHHHHHhCC-CeEEEcCChhhHh--------cCCCC
Q 029984 45 NIGFISSKILSFCPKAS-LRGNL-E--------AVGVPTSVPVRVAHELLQAG-HRYLDVRTPEEFS--------AGHAT 105 (184)
Q Consensus 45 ~~~~l~~~~~~~~~~~~-~~~~~-~--------~~~~~~~i~~~~~~~~~~~~-~~liDvR~~~e~~--------~ghIp 105 (184)
.+..+.|++..|..... ..... . .......++.+++.++++++ .+|||||++.||. .||||
T Consensus 109 ~v~~L~GG~~~w~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIp 188 (271)
T 1e0c_A 109 RYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIP 188 (271)
T ss_dssp CEEEETTHHHHHHHTTCCCBCCCCCCCCSCCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCT
T ss_pred CeEEecCCHHHHHHcCCCccCCCCCCCCCCccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCC
Confidence 35688999999975221 11100 0 01112357889998887654 8899999999999 99999
Q ss_pred CcEEeccccccCC--CCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhC-CC
Q 029984 106 GAINVPYMYRVGS--GMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN-GL 180 (184)
Q Consensus 106 gAi~ip~~~~~~~--~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~-g~ 180 (184)
||+|||+..+... ..... +.++..+. .++++++||+||.+|.||..++..|...||++|++|+|||.+|..+ |+
T Consensus 189 gA~~ip~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~ 267 (271)
T 1e0c_A 189 GAVNFEWTAAMDPSRALRIR-TDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDT 267 (271)
T ss_dssp TCEECCGGGGEEGGGTTEEC-TTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTC
T ss_pred CceeccHHHhCCCCCCCCCH-HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCC
Confidence 9999999755422 22222 45555555 5789999999999999999999999999999999999999999998 99
Q ss_pred CCCC
Q 029984 181 PTEP 184 (184)
Q Consensus 181 p~~~ 184 (184)
|+++
T Consensus 268 pv~~ 271 (271)
T 1e0c_A 268 PVEL 271 (271)
T ss_dssp CCBC
T ss_pred CCcC
Confidence 9975
No 18
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.90 E-value=9.4e-24 Score=169.70 Aligned_cols=139 Identities=14% Similarity=0.268 Sum_probs=109.1
Q ss_pred eeeecCCCccccccccc-cCccc-c--------cCCCCcccCHHHHHHHHh-CCCeEEEcCChhhH------------hc
Q 029984 45 NIGFISSKILSFCPKAS-LRGNL-E--------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF------------SA 101 (184)
Q Consensus 45 ~~~~l~~~~~~~~~~~~-~~~~~-~--------~~~~~~~i~~~~~~~~~~-~~~~liDvR~~~e~------------~~ 101 (184)
.+..+.|++..|..... ..... . .......++.+++.++++ ++.+|||||++.|| ..
T Consensus 122 ~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ 201 (296)
T 1rhs_A 122 TVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDS 201 (296)
T ss_dssp CEEEETTHHHHHHHTTCCCBCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCC
T ss_pred cEEEcCCCHHHHHHcCCccccCCCCCCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcC
Confidence 45688999999975221 11110 0 001124678899888775 45899999999999 78
Q ss_pred CCCCCcEEeccccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHh-
Q 029984 102 GHATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQ- 177 (184)
Q Consensus 102 ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~- 177 (184)
||||||+|||+.++.. .+.+.+.+.+...+. .++++++||+||.+|.||..++..|..+||++|++|+|||.+|..
T Consensus 202 ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~ 281 (296)
T 1rhs_A 202 GHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHR 281 (296)
T ss_dssp CEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHH
T ss_pred ccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcC
Confidence 9999999999976653 355667777777665 368899999999999999999999999999999999999999988
Q ss_pred CCCCCC
Q 029984 178 NGLPTE 183 (184)
Q Consensus 178 ~g~p~~ 183 (184)
.|+|++
T Consensus 282 ~~~pv~ 287 (296)
T 1rhs_A 282 APPETW 287 (296)
T ss_dssp SCGGGE
T ss_pred CCCCcc
Confidence 799885
No 19
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=4.3e-24 Score=155.47 Aligned_cols=110 Identities=28% Similarity=0.440 Sum_probs=85.9
Q ss_pred CcccCHHHHHHHHh--CCCeEEEcCChhhHhc-CCC------CCcEEeccccccCCCCCCCHHHHHHHHhc-----CCCC
Q 029984 72 PTSVPVRVAHELLQ--AGHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTR-----FRKH 137 (184)
Q Consensus 72 ~~~i~~~~~~~~~~--~~~~liDvR~~~e~~~-ghI------pgAi~ip~~~~~~~~~~~~~~~~~~~~~~-----l~~~ 137 (184)
...++++++.++++ ++++|||||++.||.. ||| |||+|||+.. .. .. ..+++.+.+... ++++
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~-~~-~~~~~~~~l~~~l~~~~~~~~ 80 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SD-GT-HNDNFLAELRDRIPADADQHE 80 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TT-SC-BCTTHHHHHHHHCC-------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-cc-cc-cCHHHHHHHHHHHhhccCCCC
Confidence 44688899998876 3689999999999997 999 9999999964 11 11 122233333332 4788
Q ss_pred CeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH------------HHHHhCCCCCCC
Q 029984 138 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF------------AAWRQNGLPTEP 184 (184)
Q Consensus 138 ~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~------------~~W~~~g~p~~~ 184 (184)
++|||||++|.||..+++.|.+.||++|++|+||+ .+|+++|+|+++
T Consensus 81 ~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~ 139 (148)
T 2fsx_A 81 RPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQ 139 (148)
T ss_dssp CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCc
Confidence 99999999999999999999999999999999999 789999999863
No 20
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.90 E-value=2.2e-23 Score=169.28 Aligned_cols=139 Identities=20% Similarity=0.324 Sum_probs=111.7
Q ss_pred eeeecCCCccccccccc-cCcc-cc-------c---CCCCcccCHHHHHHHHhCCCeEEEcCChhhHhc-----------
Q 029984 45 NIGFISSKILSFCPKAS-LRGN-LE-------A---VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA----------- 101 (184)
Q Consensus 45 ~~~~l~~~~~~~~~~~~-~~~~-~~-------~---~~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~----------- 101 (184)
.+..++|++..|..... .... .. . ......++.+++.++++++ +|||||++.||..
T Consensus 139 ~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~ 217 (318)
T 3hzu_A 139 DVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEE 217 (318)
T ss_dssp CEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCCTTTBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSC
T ss_pred ceEEccCCHHHHhhcCCCcccCCCCCCCCccccccCCCccccccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccc
Confidence 45789999999986321 1110 00 0 1112346889999888776 8999999999998
Q ss_pred -----CCCCCcEEecccccc-CCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHH-ccCCCeeeccccHHH
Q 029984 102 -----GHATGAINVPYMYRV-GSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITDIAGGFAA 174 (184)
Q Consensus 102 -----ghIpgAi~ip~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~-~G~~~v~~l~GG~~~ 174 (184)
||||||+|||+..+. ..+.+.+.+.+...+..++++++||+||++|.||..++..|.+ .||++|++|+|||.+
T Consensus 218 ~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~ 297 (318)
T 3hzu_A 218 GALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTE 297 (318)
T ss_dssp SCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHH
T ss_pred cCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHH
Confidence 999999999996554 3466777788888888889999999999999999999999997 899999999999999
Q ss_pred HHh-CCCCCCC
Q 029984 175 WRQ-NGLPTEP 184 (184)
Q Consensus 175 W~~-~g~p~~~ 184 (184)
|.+ .|+|+++
T Consensus 298 W~~~~g~Pv~~ 308 (318)
T 3hzu_A 298 WGNAVRVPIVA 308 (318)
T ss_dssp HTTSTTCCCBC
T ss_pred HhcCCCCCccc
Confidence 995 6999874
No 21
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=2.1e-23 Score=166.58 Aligned_cols=140 Identities=21% Similarity=0.344 Sum_probs=110.3
Q ss_pred eeeecCCCcccccccc-ccCc-ccc---------cCCCCcccCHHHHHHHHh----CCCeEEEcCChhhHh---------
Q 029984 45 NIGFISSKILSFCPKA-SLRG-NLE---------AVGVPTSVPVRVAHELLQ----AGHRYLDVRTPEEFS--------- 100 (184)
Q Consensus 45 ~~~~l~~~~~~~~~~~-~~~~-~~~---------~~~~~~~i~~~~~~~~~~----~~~~liDvR~~~e~~--------- 100 (184)
.+.++.|++..|.... .... ... .......++++++.++++ ++..|||||++.||.
T Consensus 107 ~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~ 186 (285)
T 1uar_A 107 DVRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDY 186 (285)
T ss_dssp CEEEETTHHHHHHHHTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC------
T ss_pred CeEEecCCHHHHHHCCCcccCCCCcccCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccc
Confidence 4568899999996521 1111 000 011123489999998884 456799999999997
Q ss_pred -------cCCCCCcEEeccccccC-CCCCCCHHHHHHHHhc--CCCCCeEEEEcCCChhHHHHHHHHH-HccCCCeeecc
Q 029984 101 -------AGHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLL-NAGFAGITDIA 169 (184)
Q Consensus 101 -------~ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~~--l~~~~~ivv~c~~g~rs~~~~~~L~-~~G~~~v~~l~ 169 (184)
.||||||+|||+..+.. .+.+.+++.+...+.. ++++++|||||++|.||..+++.|+ .+||++|++|+
T Consensus 187 ~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~ 266 (285)
T 1uar_A 187 PQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYD 266 (285)
T ss_dssp --CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEES
T ss_pred cccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeC
Confidence 89999999999876542 3566778888887776 7899999999999999999999999 99999999999
Q ss_pred ccHHHHH-hCCCCCCC
Q 029984 170 GGFAAWR-QNGLPTEP 184 (184)
Q Consensus 170 GG~~~W~-~~g~p~~~ 184 (184)
|||.+|. .+|+|+++
T Consensus 267 GG~~~W~~~~g~pv~~ 282 (285)
T 1uar_A 267 GSWTEWGNLVGVPIAK 282 (285)
T ss_dssp SHHHHHTTSTTCCCBC
T ss_pred chHHHHhcCCCCCccc
Confidence 9999998 78999874
No 22
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.90 E-value=2.2e-23 Score=168.19 Aligned_cols=139 Identities=15% Similarity=0.301 Sum_probs=110.0
Q ss_pred ceeeecCCCccccccccc-cCcc-cc--------cCCCCcccCHHHHHHHHh-CCCeEEEcCChhhH-----------hc
Q 029984 44 DNIGFISSKILSFCPKAS-LRGN-LE--------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-----------SA 101 (184)
Q Consensus 44 ~~~~~l~~~~~~~~~~~~-~~~~-~~--------~~~~~~~i~~~~~~~~~~-~~~~liDvR~~~e~-----------~~ 101 (184)
..+..+.|++..|..... .... .. .......++.+++.+.++ ++.+|||||++.|| ..
T Consensus 136 ~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~ 215 (302)
T 3olh_A 136 HAVSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEP 215 (302)
T ss_dssp CCEEEETTHHHHHHHSCCC-CCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCC
T ss_pred CcEEECCCCHHHHHHcCCCcccCCCCcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcC
Confidence 346889999999986221 1111 00 011123578888888775 45899999999999 78
Q ss_pred CCCCCcEEeccccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhC
Q 029984 102 GHATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN 178 (184)
Q Consensus 102 ghIpgAi~ip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 178 (184)
||||||+|||+.++.. .+.+.+.+.+...+. .++++++||+||++|.||..++..|+.+||++|++|+|||.+|.++
T Consensus 216 GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~ 295 (302)
T 3olh_A 216 GHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMR 295 (302)
T ss_dssp CCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHH
T ss_pred ccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhc
Confidence 9999999999976653 456777888887766 4788999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 029984 179 GLPT 182 (184)
Q Consensus 179 g~p~ 182 (184)
|+|.
T Consensus 296 ~~P~ 299 (302)
T 3olh_A 296 ARPE 299 (302)
T ss_dssp HCCC
T ss_pred cCCC
Confidence 9885
No 23
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.89 E-value=3.5e-24 Score=156.69 Aligned_cols=106 Identities=20% Similarity=0.294 Sum_probs=86.7
Q ss_pred CCcccCHHHHHHHHh-CCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcC-CCh
Q 029984 71 VPTSVPVRVAHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ-SGK 148 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~-~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~-~g~ 148 (184)
....++++++.++++ ++++|||||+++||..||||||+|||+..+. +.+..+...++++++|||||+ +|.
T Consensus 26 ~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~~G~ 97 (152)
T 1t3k_A 26 SISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFD--------DKISHLVQNVKDKDTLVFHSALSQV 97 (152)
T ss_dssp SSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSS--------TTHHHHHHTCCSCCEEEESSSCCSS
T ss_pred CCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCCCCc
Confidence 345577777777665 3588999999999999999999999985321 234555556688999999999 999
Q ss_pred hHHHHHHHHHH--------ccCCCeeeccccHHHHHhCCCCCCC
Q 029984 149 RSMMAATDLLN--------AGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 149 rs~~~~~~L~~--------~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
|+..++..|.+ .||++|++|+||+.+|.++|+|+++
T Consensus 98 rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 141 (152)
T 1t3k_A 98 RGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCR 141 (152)
T ss_dssp SHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCC
T ss_pred chHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcccc
Confidence 99888887754 7999999999999999999999864
No 24
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.89 E-value=5.4e-23 Score=163.11 Aligned_cols=113 Identities=19% Similarity=0.169 Sum_probs=96.3
Q ss_pred CcccCHHHHHHHHhC-CCeEEEcCChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHHHHhc--CCCCCeEEEE
Q 029984 72 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--FRKHDEIIVG 143 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~--l~~~~~ivv~ 143 (184)
+..++++++.+++++ +++|||||++.||..||||||+|||+..+... +++...+.+...+.. ++++++||||
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 456889999988854 58899999999999999999999999754322 455566666666655 6889999999
Q ss_pred cCCCh-hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 144 CQSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 144 c~~g~-rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
|++|. +|..+++.|+..||++|++|+||+.+|+.+|+|+++
T Consensus 88 c~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~ 129 (271)
T 1e0c_A 88 DDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSR 129 (271)
T ss_dssp CSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccC
Confidence 99988 999999999999999999999999999999999863
No 25
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.89 E-value=8.3e-23 Score=162.50 Aligned_cols=139 Identities=22% Similarity=0.330 Sum_probs=106.4
Q ss_pred eeeecCCCccccccccc-cCcccccC----------CCCcccCHHHHHHHHhCCCeEEEcCChhhHhc------------
Q 029984 45 NIGFISSKILSFCPKAS-LRGNLEAV----------GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA------------ 101 (184)
Q Consensus 45 ~~~~l~~~~~~~~~~~~-~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~------------ 101 (184)
.+..+.|++..|..... ........ .....++.+++.+++.++. |||||++.||..
T Consensus 105 ~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~ 183 (277)
T 3aay_A 105 KVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQ 183 (277)
T ss_dssp SEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCC
T ss_pred cEEEecCCHHHHHHcCCccccCCCCcCCCCccccCcccchhcCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccc
Confidence 45688999999965221 11110000 0111266888888776655 999999999985
Q ss_pred ----CCCCCcEEecccccc-CCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHH-ccCCCeeeccccHH
Q 029984 102 ----GHATGAINVPYMYRV-GSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLN-AGFAGITDIAGGFA 173 (184)
Q Consensus 102 ----ghIpgAi~ip~~~~~-~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~-~G~~~v~~l~GG~~ 173 (184)
||||||+|||+..+. ..+.+.+++.+...+. .++++++||+||.+|.||..+++.|++ +||++|++|+|||.
T Consensus 184 ~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~ 263 (277)
T 3aay_A 184 SQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWT 263 (277)
T ss_dssp CSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHH
T ss_pred cccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHH
Confidence 999999999986543 2355667777777665 468899999999999999999999996 99999999999999
Q ss_pred HHHh-CCCCCCC
Q 029984 174 AWRQ-NGLPTEP 184 (184)
Q Consensus 174 ~W~~-~g~p~~~ 184 (184)
+|.. +|+|+++
T Consensus 264 ~W~~~~g~pv~~ 275 (277)
T 3aay_A 264 EYGSLVGAPIEL 275 (277)
T ss_dssp HHTTSTTCCCBC
T ss_pred HHhcCCCCCCcc
Confidence 9999 8999874
No 26
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=147.98 Aligned_cols=106 Identities=24% Similarity=0.219 Sum_probs=81.0
Q ss_pred ccCHHHHHHHHhC--CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHH---h------cCCCCCeEEE
Q 029984 74 SVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVS---T------RFRKHDEIIV 142 (184)
Q Consensus 74 ~i~~~~~~~~~~~--~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~---~------~l~~~~~ivv 142 (184)
.++++++.+++++ +++|||||++.||..||||||+|||+..+... ....+.... . .++++++|||
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~ivv 77 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPIYV 77 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEEEE
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeEEE
Confidence 4788899888764 38999999999999999999999998533211 111111111 1 1234569999
Q ss_pred EcCCChhHHHHHHHHHHc------cCCCeeeccccHHHHHhCCCCCC
Q 029984 143 GCQSGKRSMMAATDLLNA------GFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 143 ~c~~g~rs~~~~~~L~~~------G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
||.+|.||..+++.|.+. |+.+|++|+|||.+|.+++.|..
T Consensus 78 ~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~ 124 (127)
T 3i2v_A 78 ICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTF 124 (127)
T ss_dssp ECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTS
T ss_pred EcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCC
Confidence 999999999999999999 68899999999999998876643
No 27
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.89 E-value=2.8e-23 Score=147.93 Aligned_cols=103 Identities=25% Similarity=0.404 Sum_probs=77.8
Q ss_pred cccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCC----------CC-----------CCCHHHHHHHH
Q 029984 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS----------GM-----------TKNLKFVEEVS 131 (184)
Q Consensus 73 ~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~----------~~-----------~~~~~~~~~~~ 131 (184)
..++++++.+ .++++|||||++.||..||||||+|||+..+... +. ......+....
T Consensus 5 ~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (134)
T 3g5j_A 5 SVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQA 82 (134)
T ss_dssp CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred cccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHHHHH
Confidence 4567777765 5568999999999999999999999998421100 00 00001223333
Q ss_pred hcCCCC-CeEEEEc-CCChhHHHHHHHHHHccCCCeeeccccHHHHHhC
Q 029984 132 TRFRKH-DEIIVGC-QSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQN 178 (184)
Q Consensus 132 ~~l~~~-~~ivv~c-~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~ 178 (184)
..++++ ++||||| .+|.||..+++.|+..|| +|++|+||+.+|++.
T Consensus 83 ~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 83 AELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 445677 9999999 589999999999999999 999999999999874
No 28
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.88 E-value=1.3e-23 Score=138.93 Aligned_cols=77 Identities=32% Similarity=0.567 Sum_probs=68.2
Q ss_pred CeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEcCCChhHHHHHHHHHHccCCCe
Q 029984 88 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGKRSMMAATDLLNAGFAGI 165 (184)
Q Consensus 88 ~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v 165 (184)
.+|||||++.||..||||||+|+|+ +.+......+ +++++||+||.+|.||..+++.|++.||++|
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPL------------KEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCH------------HHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSE
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCH------------HHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999998 3444445444 7899999999999999999999999999999
Q ss_pred eeccccHHHHHh
Q 029984 166 TDIAGGFAAWRQ 177 (184)
Q Consensus 166 ~~l~GG~~~W~~ 177 (184)
+++ |||.+|..
T Consensus 70 ~~l-GG~~~w~~ 80 (85)
T 2jtq_A 70 ENA-GGLKDIAM 80 (85)
T ss_dssp EEE-EETTTCCS
T ss_pred Eec-cCHHHHhc
Confidence 999 99999954
No 29
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.88 E-value=3.2e-23 Score=148.46 Aligned_cols=107 Identities=21% Similarity=0.298 Sum_probs=86.0
Q ss_pred CcccCHHHHHHHHh-C-CCeEEEcCChhhHhc-CCC------CCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeE
Q 029984 72 PTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEI 140 (184)
Q Consensus 72 ~~~i~~~~~~~~~~-~-~~~liDvR~~~e~~~-ghI------pgAi~ip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~i 140 (184)
...++++++.++++ + +++|||||++.||.. +|+ |||+|||+... ..++++..+...+ +++++|
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~------~~~~~~~~l~~~~~~~~~~~i 77 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE------DKPGFLKKLSLKFKDPENTTL 77 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGG------GHHHHHHHHHTTCSCGGGCEE
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccc------cChhHHHHHHHHhCCCCCCEE
Confidence 34588889988876 3 588999999999985 333 79999998521 1223444444433 678999
Q ss_pred EEEcCCChhHHHHHHHHHHccCCCeeeccccH---HHHHhCCCCCCC
Q 029984 141 IVGCQSGKRSMMAATDLLNAGFAGITDIAGGF---AAWRQNGLPTEP 184 (184)
Q Consensus 141 vv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~---~~W~~~g~p~~~ 184 (184)
||||.+|.||..++..|.++||++|++|.||+ .+|+++|+|+++
T Consensus 78 vv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~ 124 (134)
T 1vee_A 78 YILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIE 124 (134)
T ss_dssp EEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEEC
T ss_pred EEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCC
Confidence 99999999999999999999999999999999 789999999863
No 30
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=1.4e-22 Score=161.42 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=94.5
Q ss_pred cccCHHHHHHHHhC-CCeEEEcC----------ChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHHHHhc--C
Q 029984 73 TSVPVRVAHELLQA-GHRYLDVR----------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--F 134 (184)
Q Consensus 73 ~~i~~~~~~~~~~~-~~~liDvR----------~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~--l 134 (184)
..++++++.+++++ +++||||| ++.||..||||||+|+|+..+... +++.+.+.+...+.. +
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 46788899888764 58899999 789999999999999999754322 345566677766665 5
Q ss_pred CCCCeEEEEcCCChh-HHHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 135 RKHDEIIVGCQSGKR-SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 135 ~~~~~ivv~c~~g~r-s~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
+++++|||||.+|.+ |..+++.|+..||++|++|+||+.+|..+|+|++
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 133 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLE 133 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCccc
Confidence 789999999999998 9999999999999999999999999999999986
No 31
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.88 E-value=2.3e-22 Score=163.35 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=95.3
Q ss_pred CcccCHHHHHHHHhC-CCeEEEcCChhh-HhcCCCCCcEEecccccc---CCCCCCCHHHHHHHHhc--CCCCCeEEEEc
Q 029984 72 PTSVPVRVAHELLQA-GHRYLDVRTPEE-FSAGHATGAINVPYMYRV---GSGMTKNLKFVEEVSTR--FRKHDEIIVGC 144 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~liDvR~~~e-~~~ghIpgAi~ip~~~~~---~~~~~~~~~~~~~~~~~--l~~~~~ivv~c 144 (184)
...++++++.+++++ +++|||||++.| |..||||||+|||+.... ..+.+.+.+.+...+.. ++++++|||||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 446899999998864 488999999876 999999999999974222 23455666677777666 68899999999
Q ss_pred CCCh-hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 145 QSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 145 ~~g~-rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
++|. +|..+++.|+..||++|++|+||+.+|+++|+|+++
T Consensus 119 ~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 159 (318)
T 3hzu_A 119 DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTL 159 (318)
T ss_dssp SGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBC
T ss_pred CCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCccc
Confidence 9887 899999999999999999999999999999999863
No 32
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.88 E-value=1.7e-22 Score=171.83 Aligned_cols=120 Identities=25% Similarity=0.426 Sum_probs=99.7
Q ss_pred eeecCCCccccccccccCcccccCCCCcccCHHHHHHHHhC-CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCH
Q 029984 46 IGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNL 124 (184)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~ 124 (184)
..++. ++..|.... . .......++++++.+++++ +.+|||||++.||..||||||+|+|+
T Consensus 354 ~~~l~-G~~~W~~~g-----~-~~~~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~------------ 414 (474)
T 3tp9_A 354 VDWTD-PAAVDRAAP-----D-DVASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPL------------ 414 (474)
T ss_dssp EEEEC-GGGGTTCCG-----G-GEECCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCH------------
T ss_pred EEecC-cHHHHHhcc-----c-ccccccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCH------------
Confidence 34455 788887511 1 1122356888999888764 58999999999999999999999998
Q ss_pred HHHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 125 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
..+......++++++||+||++|.||..++..|+..||++|++|+|||.+|.++|+|+++
T Consensus 415 ~~l~~~~~~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 415 SKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp HHHTTTGGGSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 445555667889999999999999999999999999999999999999999999999974
No 33
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.87 E-value=4.3e-22 Score=171.98 Aligned_cols=128 Identities=19% Similarity=0.314 Sum_probs=104.9
Q ss_pred eeeecCC-CccccccccccCcccccCCCCcccCHHHHHHHHhC-CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCC
Q 029984 45 NIGFISS-KILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTK 122 (184)
Q Consensus 45 ~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~ 122 (184)
.+..+.| ++..|..................++++++.+++.+ +.+|||||++.||..||||||+|+|.
T Consensus 348 ~v~~l~G~G~~~w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~---------- 417 (539)
T 1yt8_A 348 QVAVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLR---------- 417 (539)
T ss_dssp EEEEECSCCGGGCCBCSSCCCCCCCCCCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCG----------
T ss_pred eEEEecCCChHHHHHhhccccCCCCCCcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCH----------
Confidence 3556888 99999763221111112334567899999998875 48899999999999999999999998
Q ss_pred CHHHHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 123 NLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 123 ~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
..+...+..++++++||+||.+|.||..++..|+..||++|++|+|||.+|.++|+|+++
T Consensus 418 --~~l~~~l~~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 477 (539)
T 1yt8_A 418 --SQLKQALERLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTED 477 (539)
T ss_dssp --GGHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBC
T ss_pred --HHHHHHHHhCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCccc
Confidence 345555566788999999999999999999999999999999999999999999999874
No 34
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.87 E-value=4.9e-22 Score=158.04 Aligned_cols=112 Identities=16% Similarity=0.225 Sum_probs=92.9
Q ss_pred cccCHHHHHHHHhC-CCeEEEcCC-hhhHhcCCCCCcEEeccccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEcC
Q 029984 73 TSVPVRVAHELLQA-GHRYLDVRT-PEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 145 (184)
Q Consensus 73 ~~i~~~~~~~~~~~-~~~liDvR~-~~e~~~ghIpgAi~ip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c~ 145 (184)
..++++++.+++++ +.+|||||+ +.||..||||||+|||+..... .+.+.+.+.+...+.. ++++++|||||.
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~ 85 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGG 85 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEECS
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 35788888887765 478999998 8999999999999999864322 2344556666666655 788999999999
Q ss_pred CCh-hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 146 SGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 146 ~g~-rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
+|. +|..+++.|+..||++|++|+||+.+|+.+|+|+++
T Consensus 86 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 125 (277)
T 3aay_A 86 NNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSS 125 (277)
T ss_dssp GGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBC
T ss_pred CCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCcccc
Confidence 875 688999999999999999999999999999999863
No 35
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.86 E-value=1.8e-21 Score=156.32 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=94.3
Q ss_pred CcccCHHHHHHHHhC-----CCeEEEcC--------ChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHHHHhc
Q 029984 72 PTSVPVRVAHELLQA-----GHRYLDVR--------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR 133 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~-----~~~liDvR--------~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~~~~~ 133 (184)
...++++++.+++++ +++||||| ++.||..||||||+|||+..+... .++.+.+.+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 457889999998875 58899999 689999999999999999744321 344556666666654
Q ss_pred --CCCCCeEEEEcCC--Chh-HHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 134 --FRKHDEIIVGCQS--GKR-SMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 134 --l~~~~~ivv~c~~--g~r-s~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
++++++|||||.+ |.+ +.++++.|+..||++|++|+||+.+|+.+|+|+++
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 142 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTS 142 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcccc
Confidence 6789999999998 876 88999999999999999999999999999999863
No 36
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.86 E-value=9.3e-22 Score=144.80 Aligned_cols=102 Identities=17% Similarity=0.288 Sum_probs=83.5
Q ss_pred CCCcccCHHHHHHHHhC-------CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cC-CCCC
Q 029984 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RF-RKHD 138 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~---~l-~~~~ 138 (184)
.....++++++.+++++ +++|||||++.||..||||||+|||+. +....... .+ ++++
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~-----------~~~~~~~~~~~~~~~~~~ 88 (161)
T 1c25_A 20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHME-----------EEVEDFLLKKPIVPTDGK 88 (161)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHTTTSCCCCCTTS
T ss_pred CCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChh-----------HHHHHHHhhhhhccCCCC
Confidence 34567999999998875 578999999999999999999999984 33333322 22 5678
Q ss_pred eE--EEEcC-CChhHHHHHHHHHHc----------cCCCeeeccccHHHHHhCCCCC
Q 029984 139 EI--IVGCQ-SGKRSMMAATDLLNA----------GFAGITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 139 ~i--vv~c~-~g~rs~~~~~~L~~~----------G~~~v~~l~GG~~~W~~~g~p~ 182 (184)
++ |+||. +|.||..++..|.+. ||++|++|+||+.+|.++|.|+
T Consensus 89 ~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~ 145 (161)
T 1c25_A 89 RVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY 145 (161)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred CeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccc
Confidence 86 67899 999999999999864 9999999999999999987765
No 37
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.86 E-value=2.1e-21 Score=149.08 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=84.7
Q ss_pred CCCcccCHHHHHHHHhC-------CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cCC--CC
Q 029984 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KH 137 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~---~l~--~~ 137 (184)
.....++++++.+++++ +++|||||++.||..||||||+|||+. +....... .++ ++
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~-----------~l~~~~~~~~~~l~~~~d 109 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLD 109 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHTTTCCCSSTT
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCch-----------HHHHHhhhhhhhccccCC
Confidence 34567899999998875 478999999999999999999999984 33332222 343 67
Q ss_pred CeE--EEEcC-CChhHHHHHHHHHH----------ccCCCeeeccccHHHHHhCCCCC
Q 029984 138 DEI--IVGCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 138 ~~i--vv~c~-~g~rs~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~p~ 182 (184)
++| |+||. +|.||..++..|.+ .||++|++|+||+.+|.++|.|+
T Consensus 110 ~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~ 167 (211)
T 1qb0_A 110 KRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211)
T ss_dssp SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccc
Confidence 887 78899 99999999999986 69999999999999999998775
No 38
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.86 E-value=3.7e-21 Score=155.12 Aligned_cols=115 Identities=18% Similarity=0.180 Sum_probs=93.6
Q ss_pred CCCcccCHHHHHHHHhC-----CCeEEEcC---------ChhhHhcCCCCCcEEecccccc-----CCCCCCCHHHHHHH
Q 029984 70 GVPTSVPVRVAHELLQA-----GHRYLDVR---------TPEEFSAGHATGAINVPYMYRV-----GSGMTKNLKFVEEV 130 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-----~~~liDvR---------~~~e~~~ghIpgAi~ip~~~~~-----~~~~~~~~~~~~~~ 130 (184)
.....++++++.+++++ +++||||| ++.||..||||||+|||+..+. ..+++...+.+...
T Consensus 19 ~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~ 98 (302)
T 3olh_A 19 YFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEY 98 (302)
T ss_dssp -CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred CCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence 34567899999998875 68899999 8899999999999999986432 12344566677776
Q ss_pred HhcC--CCCCeEEEEcCC---ChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 131 STRF--RKHDEIIVGCQS---GKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 131 ~~~l--~~~~~ivv~c~~---g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
+..+ +++++|||||.+ +.+|.++++.|+..||++|++|+||+.+|+.+|+|+++
T Consensus 99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 157 (302)
T 3olh_A 99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSS 157 (302)
T ss_dssp HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CC
T ss_pred HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCccc
Confidence 6664 789999999964 34699999999999999999999999999999999863
No 39
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.86 E-value=5.4e-22 Score=158.37 Aligned_cols=111 Identities=16% Similarity=0.195 Sum_probs=92.7
Q ss_pred cccCHHHHHHHHhC-CCeEEEcC-ChhhHhcCCCCCcEEeccccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEcC
Q 029984 73 TSVPVRVAHELLQA-GHRYLDVR-TPEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 145 (184)
Q Consensus 73 ~~i~~~~~~~~~~~-~~~liDvR-~~~e~~~ghIpgAi~ip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c~ 145 (184)
..++++++.+++++ +++||||| ++.||..||||||+|+|+..... .+.+.+.+.+...+.. ++++++|||||+
T Consensus 8 ~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~ 87 (285)
T 1uar_A 8 VLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGD 87 (285)
T ss_dssp GEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECH
T ss_pred ceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 46888999888775 58899999 78999999999999999853221 2344555566666554 588999999999
Q ss_pred CCh-hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 146 SGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 146 ~g~-rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
+|. +|..+++.|+..||++|++|+||+.+|..+|+|++
T Consensus 88 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 126 (285)
T 1uar_A 88 KNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLT 126 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCB
T ss_pred CCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCccc
Confidence 988 79999999999999999999999999999999986
No 40
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.86 E-value=2.3e-21 Score=144.57 Aligned_cols=102 Identities=17% Similarity=0.201 Sum_probs=81.4
Q ss_pred CCCcccCHHHHHHHHhC-------CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHh---cCC--CC
Q 029984 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KH 137 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~---~l~--~~ 137 (184)
.....++++++.+++++ +++|||||++.||..||||||+|||+. +....... .++ ++
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~-----------~l~~~~~~~~~~~~~~~~ 89 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLD 89 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHSSCCCC----
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChh-----------HHHHHhhhhhhhccccCC
Confidence 34567999999998875 478999999999999999999999984 23233222 133 67
Q ss_pred CeEEE--EcC-CChhHHHHHHHHHH----------ccCCCeeeccccHHHHHhCCCCC
Q 029984 138 DEIIV--GCQ-SGKRSMMAATDLLN----------AGFAGITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 138 ~~ivv--~c~-~g~rs~~~~~~L~~----------~G~~~v~~l~GG~~~W~~~g~p~ 182 (184)
++||| ||+ +|.||..++..|++ .||++|++|+||+.+|.++|.|+
T Consensus 90 ~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~ 147 (175)
T 2a2k_A 90 KRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 147 (175)
T ss_dssp CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc
Confidence 88855 698 89999999999986 49999999999999999998775
No 41
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.85 E-value=3e-21 Score=162.25 Aligned_cols=141 Identities=13% Similarity=0.196 Sum_probs=107.2
Q ss_pred ceeeecCCCccccccccc-cCc-ccc---c---------CCCCcccCHHHHHHHHhC-CCeEEEcCChhhH---------
Q 029984 44 DNIGFISSKILSFCPKAS-LRG-NLE---A---------VGVPTSVPVRVAHELLQA-GHRYLDVRTPEEF--------- 99 (184)
Q Consensus 44 ~~~~~l~~~~~~~~~~~~-~~~-~~~---~---------~~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~--------- 99 (184)
..+..++|++..|..... ... ... . ......++.+++.+++.+ +.+|||||++.||
T Consensus 229 ~~v~~l~Gg~~~W~~~g~pv~~g~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~ 308 (423)
T 2wlr_A 229 KDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSY 308 (423)
T ss_dssp SCEEEETTTHHHHHHTTCCCBCSSCCCCCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTT
T ss_pred CCeEEECCCHHHHhhCCCCcccCCCCCCCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCC
Confidence 346788999999965211 111 000 0 001234788888887764 4789999999999
Q ss_pred --hcCCCCCcEEeccc-------cc-cCCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeee
Q 029984 100 --SAGHATGAINVPYM-------YR-VGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 100 --~~ghIpgAi~ip~~-------~~-~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
..||||||+|+|+. ++ ...+.+.+.+.+...+. .++++++||+||.+|.||..++..|+.+||+||++
T Consensus 309 ~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~ 388 (423)
T 2wlr_A 309 IKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSV 388 (423)
T ss_dssp CCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcce
Confidence 78999999999974 11 12345566677777664 57889999999999999999999999999999999
Q ss_pred ccccHHHHHh-CCCCCCC
Q 029984 168 IAGGFAAWRQ-NGLPTEP 184 (184)
Q Consensus 168 l~GG~~~W~~-~g~p~~~ 184 (184)
|+|||.+|.. .|+|+++
T Consensus 389 ~~GG~~~W~~~~~~Pv~~ 406 (423)
T 2wlr_A 389 YDGGWYEWSSDPKNPVAT 406 (423)
T ss_dssp ESSHHHHHTTSTTSCEEC
T ss_pred eCccHHHHhcCCCCCccc
Confidence 9999999998 8999863
No 42
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.85 E-value=8.5e-22 Score=143.80 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=78.7
Q ss_pred CcccCHHHHHHHHh---CCCeEEEcCChhhHhcCCCCCcEEeccccccC----CCCCCCHHHH-HHHHh--cCCCCCeEE
Q 029984 72 PTSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVG----SGMTKNLKFV-EEVST--RFRKHDEII 141 (184)
Q Consensus 72 ~~~i~~~~~~~~~~---~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~----~~~~~~~~~~-~~~~~--~l~~~~~iv 141 (184)
.+.|+++++.++++ ++++|||||++.||..||||||+|||+..+.. .+.......+ ..... .++++++||
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iV 82 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVV 82 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEE
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEE
Confidence 35678899999886 34889999999999999999999999853210 0100000110 00001 246789999
Q ss_pred EEcCCChhHHHH------HHHHH--HccCCCeeeccccHHHHHhCCCC
Q 029984 142 VGCQSGKRSMMA------ATDLL--NAGFAGITDIAGGFAAWRQNGLP 181 (184)
Q Consensus 142 v~c~~g~rs~~~------~~~L~--~~G~~~v~~l~GG~~~W~~~g~p 181 (184)
|||++|.++..+ ++.|. ..||++|++|+||+.+|.+.+.+
T Consensus 83 vyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~ 130 (153)
T 2vsw_A 83 VYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPG 130 (153)
T ss_dssp EECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGG
T ss_pred EEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChh
Confidence 999999887655 56776 34999999999999999886543
No 43
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.85 E-value=1.6e-21 Score=151.28 Aligned_cols=99 Identities=33% Similarity=0.506 Sum_probs=82.4
Q ss_pred ccCHHHHHHHHhCCCeEEEcCChhhHhc----------CCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEE
Q 029984 74 SVPVRVAHELLQAGHRYLDVRTPEEFSA----------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVG 143 (184)
Q Consensus 74 ~i~~~~~~~~~~~~~~liDvR~~~e~~~----------ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~ 143 (184)
.++.+++.+ +.+|||||++.||.. ||||||+|+|+..+.... +.+.. ..++++++||+|
T Consensus 122 ~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-----e~~~~--~~~~~~~~iv~~ 190 (230)
T 2eg4_A 122 LLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-----GLLER--LGLQPGQEVGVY 190 (230)
T ss_dssp BCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-----THHHH--HTCCTTCEEEEE
T ss_pred eeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-----HHHHh--cCCCCCCCEEEE
Confidence 466776655 788999999999998 999999999986443221 11111 247889999999
Q ss_pred cCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 144 CQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 144 c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
|++|.||..++..|+++| .+|++|+|||.+|.++|+|+++
T Consensus 191 C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 191 CHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp CSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred cCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 999999999999999999 8999999999999999999975
No 44
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.84 E-value=8.8e-21 Score=149.90 Aligned_cols=105 Identities=19% Similarity=0.216 Sum_probs=85.1
Q ss_pred CCCcccCHHHHHHHHhC-CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCCh
Q 029984 70 GVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (184)
.....++++++.+++++ +++|||||++.||..||||||+|+|+..+. ..++.+.... ..+++++||+||.+|.
T Consensus 119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~-----~~~~~l~~~l-~~~kdk~IVvyC~~G~ 192 (265)
T 4f67_A 119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFR-----EFPDYVQRNL-IDKKDKKIAMFCTGGI 192 (265)
T ss_dssp CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGG-----GHHHHHHHHT-GGGTTSCEEEECSSSH
T ss_pred CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHH-----hhHHHHHHhh-hhCCCCeEEEEeCCCh
Confidence 34567899999999875 489999999999999999999999985221 0112222222 2367899999999999
Q ss_pred hHHHHHHHHHHccCCCeeeccccHHHHHhCCC
Q 029984 149 RSMMAATDLLNAGFAGITDIAGGFAAWRQNGL 180 (184)
Q Consensus 149 rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~ 180 (184)
||..+++.|.+.||++|++|+||+.+|.++..
T Consensus 193 RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 193 RCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp HHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 99999999999999999999999999988643
No 45
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.84 E-value=5.1e-21 Score=139.82 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=78.4
Q ss_pred CcccCHHHHHHHHhC-----CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEc
Q 029984 72 PTSVPVRVAHELLQA-----GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGC 144 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~-----~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c 144 (184)
...++++++.+++++ +++|||||++ ||..||||||+|||+..+. ...+..+...+ ...+.||+||
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~-------~~~~~~l~~~l~~~~~~~vV~yC 75 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCT-------EEMYEKLAKTLFEEKKELAVFHC 75 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCC-------HHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhh-------HHHHHHHHHHhcccCCCEEEEEc
Confidence 346888999988875 6889999999 9999999999999985321 11222222222 2334577789
Q ss_pred -CCChhHHHHH----HHHHHccC--CCeeeccccHHHHHhCCCCC
Q 029984 145 -QSGKRSMMAA----TDLLNAGF--AGITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 145 -~~g~rs~~~~----~~L~~~G~--~~v~~l~GG~~~W~~~g~p~ 182 (184)
.+|.|+..++ ..|.+.|| .+|++|+||+.+|.++|.++
T Consensus 76 ~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 76 AQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred CCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 6999998887 77888997 58999999999999988765
No 46
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=145.14 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=79.0
Q ss_pred CCcccCHHHHHHHHhC-------CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc---C--CCCC
Q 029984 71 VPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---F--RKHD 138 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~-------~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~---l--~~~~ 138 (184)
....|+++++.+++++ +++|||||++.||..||||||+|||+. +.+...+.. + ++++
T Consensus 55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~-----------~~l~~~l~~~~~~~~~~~k 123 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQ-----------EELFNFFLKKPIVPLDTQK 123 (216)
T ss_dssp SSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSH-----------HHHHHHHTSSCCCCSSTTS
T ss_pred CCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChH-----------HHHHHHHhhccccccccCC
Confidence 4567999999999875 378999999999999999999999983 334444321 2 2344
Q ss_pred --eEEEEcC-CChhHHHHHHHHHHc----------cCCCeeeccccHHHHHhCC
Q 029984 139 --EIIVGCQ-SGKRSMMAATDLLNA----------GFAGITDIAGGFAAWRQNG 179 (184)
Q Consensus 139 --~ivv~c~-~g~rs~~~~~~L~~~----------G~~~v~~l~GG~~~W~~~g 179 (184)
+|||||. +|.||..++..|+.. ||++|++|+||+.+|.++.
T Consensus 124 ~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 124 RIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp EEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 4999999 999999999999987 8999999999999998763
No 47
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.84 E-value=3.7e-21 Score=138.03 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=74.5
Q ss_pred ccCHHHHHH--------HHhC-CCeEEEcCChhhHhcCCCCCcEEeccccccCC-----CCCCCHHHHHH-----HHhcC
Q 029984 74 SVPVRVAHE--------LLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEE-----VSTRF 134 (184)
Q Consensus 74 ~i~~~~~~~--------~~~~-~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~-----~~~~~~~~~~~-----~~~~l 134 (184)
.++++++.+ .+++ +++|||||++.||..||||||+|+|+..+... +....++.+.. .....
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 467778777 4443 58999999999999999999999998532110 00000111100 00000
Q ss_pred CCCCeEEEEcCCChhH---------HHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 135 RKHDEIIVGCQSGKRS---------MMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs---------~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
++++|||||++|.++ ..++..|...|| +|++|+||+.+|.++|.++.
T Consensus 82 -~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~ 137 (142)
T 2ouc_A 82 -FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 137 (142)
T ss_dssp -HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGE
T ss_pred -CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhh
Confidence 267899999998874 467788999999 99999999999999998763
No 48
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.84 E-value=4.4e-21 Score=158.84 Aligned_cols=110 Identities=16% Similarity=0.077 Sum_probs=91.9
Q ss_pred CcccCHHHHHHHHhCCCeEEEcCC--------hhhHhcCCCCCcEEecccc-ccC-------CCCCCCHHHHHHHHh--c
Q 029984 72 PTSVPVRVAHELLQAGHRYLDVRT--------PEEFSAGHATGAINVPYMY-RVG-------SGMTKNLKFVEEVST--R 133 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~~~~liDvR~--------~~e~~~ghIpgAi~ip~~~-~~~-------~~~~~~~~~~~~~~~--~ 133 (184)
...++++++.+++++ ++|||||+ +.||..||||||+|||+.. +.. .+.+...+.+...+. .
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~g 91 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANG 91 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTT
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcC
Confidence 567899999888777 89999998 6999999999999999974 322 234555566665554 4
Q ss_pred CCCCCeEEEEc-CCChhHH-HHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 134 FRKHDEIIVGC-QSGKRSM-MAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 134 l~~~~~ivv~c-~~g~rs~-~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
++++++||||| .+|.++. ++++.|+..|| +|++|+||+.+|+++|+|++
T Consensus 92 i~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~ 142 (373)
T 1okg_A 92 MAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEME 142 (373)
T ss_dssp CSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEE
T ss_pred CCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcc
Confidence 67899999999 6788886 99999999999 99999999999999999875
No 49
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.83 E-value=9.2e-21 Score=159.25 Aligned_cols=112 Identities=19% Similarity=0.262 Sum_probs=96.9
Q ss_pred cccCHHHHHHHHh---------CCCeEEEcC--ChhhHhcCCCCCcEEeccccccC--CCCCCCHHHHHHHHhc--CCCC
Q 029984 73 TSVPVRVAHELLQ---------AGHRYLDVR--TPEEFSAGHATGAINVPYMYRVG--SGMTKNLKFVEEVSTR--FRKH 137 (184)
Q Consensus 73 ~~i~~~~~~~~~~---------~~~~liDvR--~~~e~~~ghIpgAi~ip~~~~~~--~~~~~~~~~~~~~~~~--l~~~ 137 (184)
..++.+++.++++ ++.+|||+| ++.||..||||||+|+|+..+.. .+.+.+.+.++..+.. ++++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 4678888888876 247899999 99999999999999999976543 3566777788877754 6789
Q ss_pred CeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCCC
Q 029984 138 DEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTEP 184 (184)
Q Consensus 138 ~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 184 (184)
++||+||++|.+|..+++.|+.+||++|++|+|||.+|...|+|+++
T Consensus 204 ~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~ 250 (423)
T 2wlr_A 204 TTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVER 250 (423)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBC
T ss_pred CeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCccc
Confidence 99999999999999999999999999999999999999999999863
No 50
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.83 E-value=9.3e-22 Score=162.89 Aligned_cols=99 Identities=17% Similarity=0.295 Sum_probs=82.7
Q ss_pred hCCCeEEEcCChhhHh-----------cCCCCCcEEecccccc--C-CCC-CCCHHHHHHHHhcC----CC---CCeEEE
Q 029984 85 QAGHRYLDVRTPEEFS-----------AGHATGAINVPYMYRV--G-SGM-TKNLKFVEEVSTRF----RK---HDEIIV 142 (184)
Q Consensus 85 ~~~~~liDvR~~~e~~-----------~ghIpgAi~ip~~~~~--~-~~~-~~~~~~~~~~~~~l----~~---~~~ivv 142 (184)
.++.+|||||++.||. .||||||+|||+.++. . .+. +.+.+.++..+..+ ++ +++||+
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 4568899999999999 9999999999997654 2 233 56677787777654 77 899999
Q ss_pred EcCCChhHHHHHHHHHHccCCCeeeccccHHHHHh-CCCCCC
Q 029984 143 GCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQ-NGLPTE 183 (184)
Q Consensus 143 ~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~-~g~p~~ 183 (184)
||++|.||..++..|..+||++|++|+|||.+|.. .|+|++
T Consensus 252 yC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~ 293 (373)
T 1okg_A 252 SCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIM 293 (373)
T ss_dssp ECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHH
T ss_pred ECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999987 577653
No 51
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.83 E-value=1.3e-20 Score=162.76 Aligned_cols=101 Identities=25% Similarity=0.347 Sum_probs=86.8
Q ss_pred CcccCHHHHHHHHhC--CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC-CCCCeEEEEcCCCh
Q 029984 72 PTSVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSGK 148 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~--~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivv~c~~g~ 148 (184)
...++++++.+++.+ +.+|||||++.||..||||||+|||+. ++........ +++++|||||++|.
T Consensus 6 ~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~-----------~~~~~~~~l~~~~~~~iVvyc~~g~ 74 (539)
T 1yt8_A 6 IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLS-----------RLELEIHARVPRRDTPITVYDDGEG 74 (539)
T ss_dssp CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGG-----------GHHHHHHHHSCCTTSCEEEECSSSS
T ss_pred CcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHH-----------HHHHHHHhhCCCCCCeEEEEECCCC
Confidence 456889999988863 589999999999999999999999984 2222332323 47899999999999
Q ss_pred hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 149 RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 149 rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
+|..+++.|+..||+||++|+||+.+|+++|+|++
T Consensus 75 ~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 109 (539)
T 1yt8_A 75 LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELF 109 (539)
T ss_dssp HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCB
T ss_pred hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcc
Confidence 99999999999999999999999999999999985
No 52
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.82 E-value=4.9e-21 Score=142.28 Aligned_cols=108 Identities=22% Similarity=0.315 Sum_probs=79.4
Q ss_pred CCCcccCHHHHHHHHhC--------CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC-------
Q 029984 70 GVPTSVPVRVAHELLQA--------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------- 134 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~--------~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l------- 134 (184)
.....|+++++.+++++ +++|||||+ .||..||||||+|||+..+.. ....+..+...+
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~-----~~~~l~~l~~~~~~~~~~~ 101 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQ-----DPEYLRELKHRLLEKQADG 101 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHH-----CHHHHHHHHHHHHHHHHTS
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhc-----ccccHHHHHHHHHhhcccc
Confidence 34567999999998864 378999999 999999999999999853211 001122222211
Q ss_pred CCCCeEEEEcCCC-hhHHHHHHHHHH----cc--CCCeeeccccHHHHHhCCCCCC
Q 029984 135 RKHDEIIVGCQSG-KRSMMAATDLLN----AG--FAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 135 ~~~~~ivv~c~~g-~rs~~~~~~L~~----~G--~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
.++++|||||.+| .|+..++..|.+ .| +.+|++|+|||.+|.++|.|.+
T Consensus 102 ~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~ 157 (169)
T 3f4a_A 102 RGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDE 157 (169)
T ss_dssp SSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCT
T ss_pred cCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcc
Confidence 1247999999986 799888876654 36 5789999999999999877654
No 53
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.80 E-value=2.6e-20 Score=135.87 Aligned_cols=105 Identities=21% Similarity=0.194 Sum_probs=77.0
Q ss_pred CcccCHHHHHHHHhC---CCeEEEcCChhhHhcCCCCCcEEecccccc------C----CCCCCCHHHHHHHHhcCCCCC
Q 029984 72 PTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRV------G----SGMTKNLKFVEEVSTRFRKHD 138 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgAi~ip~~~~~------~----~~~~~~~~~~~~~~~~l~~~~ 138 (184)
...++++++.+++++ +++|||||++.||..||||||+|||+..+. . ...+..+ .....+..+++++
T Consensus 15 ~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 93 (154)
T 1hzm_A 15 AISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRG-EDRDRFTRRCGTD 93 (154)
T ss_dssp SSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTS-HHHHHHHHSTTSS
T ss_pred ccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCH-HHHHHHhccCCCC
Confidence 445677777777653 689999999999999999999999986432 1 0122222 2223344567889
Q ss_pred eEEEEcCCChhH-------HHHHHHHHHc---cCCCeeeccccHHHHHhC
Q 029984 139 EIIVGCQSGKRS-------MMAATDLLNA---GFAGITDIAGGFAAWRQN 178 (184)
Q Consensus 139 ~ivv~c~~g~rs-------~~~~~~L~~~---G~~~v~~l~GG~~~W~~~ 178 (184)
+|||||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|..+
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 999999988765 3446667655 998 99999999999875
No 54
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.79 E-value=1e-19 Score=158.18 Aligned_cols=94 Identities=26% Similarity=0.504 Sum_probs=84.9
Q ss_pred cccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHH
Q 029984 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMM 152 (184)
Q Consensus 73 ~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~ 152 (184)
..++++++.++++++.+|||||++.||..||||||+|||+ +.+......++++++||+||.+|.||..
T Consensus 489 ~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~------------~~l~~~~~~l~~~~~iv~~C~~g~rs~~ 556 (588)
T 3ics_A 489 DTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPL------------DELRDRLEEVPVDKDIYITCQLGMRGYV 556 (588)
T ss_dssp CEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCH------------HHHTTCGGGSCSSSCEEEECSSSHHHHH
T ss_pred ceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCH------------HHHHHHHhhCCCCCeEEEECCCCcHHHH
Confidence 4578888888888889999999999999999999999998 4556666678899999999999999999
Q ss_pred HHHHHHHccCCCeeeccccHHHHHhCC
Q 029984 153 AATDLLNAGFAGITDIAGGFAAWRQNG 179 (184)
Q Consensus 153 ~~~~L~~~G~~~v~~l~GG~~~W~~~g 179 (184)
+++.|++.||+ |++|+||+.+|+++.
T Consensus 557 a~~~l~~~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 557 AARMLMEKGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp HHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred HHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence 99999999998 999999999998763
No 55
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.79 E-value=3.4e-19 Score=130.79 Aligned_cols=105 Identities=19% Similarity=0.248 Sum_probs=77.1
Q ss_pred CCCcccCHHHHHHHHhC---------CCeEEEcCChhhHhcCCCCCcEEecccccc-----CCCCCCCHHHHHHHH----
Q 029984 70 GVPTSVPVRVAHELLQA---------GHRYLDVRTPEEFSAGHATGAINVPYMYRV-----GSGMTKNLKFVEEVS---- 131 (184)
Q Consensus 70 ~~~~~i~~~~~~~~~~~---------~~~liDvR~~~e~~~ghIpgAi~ip~~~~~-----~~~~~~~~~~~~~~~---- 131 (184)
.....++++++.+++++ +.+|||||++.||..||||||+|+|+..+. ..+... +....
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~----~~~~~~~~~ 83 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKIT----VLDLISCRE 83 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCC----HHHHTCCCC
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCccc----HHhhcCCHH
Confidence 44567899999998872 489999999999999999999999996331 110000 00000
Q ss_pred --hcC--CCCCeEEEEcCCC---------hhHHHHHHHHHHccCCCeeeccccHHHHHhCC
Q 029984 132 --TRF--RKHDEIIVGCQSG---------KRSMMAATDLLNAGFAGITDIAGGFAAWRQNG 179 (184)
Q Consensus 132 --~~l--~~~~~ivv~c~~g---------~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g 179 (184)
..+ .++++|||||.+| .++..++..|...|| +|++|+|||.+|.++.
T Consensus 84 ~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~ 143 (158)
T 3tg1_B 84 GKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH 143 (158)
T ss_dssp SSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred HHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence 001 2478999999998 468899999999999 6999999999997753
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.79 E-value=3.8e-20 Score=159.94 Aligned_cols=91 Identities=27% Similarity=0.477 Sum_probs=77.2
Q ss_pred cCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHHHH
Q 029984 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAA 154 (184)
Q Consensus 75 i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~ 154 (184)
++++++.++ +++++|||||++.||..+|||||+|||+. .+......++++++||+||++|.||..++
T Consensus 475 i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga~~ip~~------------~l~~~~~~~~~~~~iv~~c~~g~rs~~a~ 541 (565)
T 3ntd_A 475 IHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGAVNIPVD------------ELRDRMHELPKDKEIIIFSQVGLRGNVAY 541 (565)
T ss_dssp ECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTCEECCGG------------GTTTSGGGSCTTSEEEEECSSSHHHHHHH
T ss_pred eeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCcEECCHH------------HHHHHHhhcCCcCeEEEEeCCchHHHHHH
Confidence 344444443 44578999999999999999999999984 33444556889999999999999999999
Q ss_pred HHHHHccCCCeeeccccHHHHHhCC
Q 029984 155 TDLLNAGFAGITDIAGGFAAWRQNG 179 (184)
Q Consensus 155 ~~L~~~G~~~v~~l~GG~~~W~~~g 179 (184)
+.|++.|| +|++|+||+.+|+++|
T Consensus 542 ~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 542 RQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999999 9999999999999876
No 57
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3e-18 Score=139.28 Aligned_cols=108 Identities=19% Similarity=0.337 Sum_probs=83.9
Q ss_pred ccCHHHHHHHHhCC-----CeEEEcCChhhHh-----------cCCCCCcEEeccccccCC-C-CCC-CHHHHHHHH---
Q 029984 74 SVPVRVAHELLQAG-----HRYLDVRTPEEFS-----------AGHATGAINVPYMYRVGS-G-MTK-NLKFVEEVS--- 131 (184)
Q Consensus 74 ~i~~~~~~~~~~~~-----~~liDvR~~~e~~-----------~ghIpgAi~ip~~~~~~~-~-~~~-~~~~~~~~~--- 131 (184)
.++.+++.+.++++ .+|||+|++++|. .||||||+|+|+..++.. + .+. ..+.+...+
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 35677777777653 6899999999996 599999999999776543 2 222 223332222
Q ss_pred -----hcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCC
Q 029984 132 -----TRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLP 181 (184)
Q Consensus 132 -----~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p 181 (184)
..++++++||+||++|.+|+..+..|+.+||+++++|+|+|.+|.....|
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 24678999999999999999999999999999999999999999875433
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.75 E-value=1.5e-18 Score=134.55 Aligned_cols=92 Identities=17% Similarity=0.123 Sum_probs=72.6
Q ss_pred CCCeEEEcCChhhHhcCCCCCcEEeccc--cccCC---CCCCCHHHHHHHHhcCCCCCeEEEEcCCCh-hHHHHHHHHHH
Q 029984 86 AGHRYLDVRTPEEFSAGHATGAINVPYM--YRVGS---GMTKNLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMAATDLLN 159 (184)
Q Consensus 86 ~~~~liDvR~~~e~~~ghIpgAi~ip~~--~~~~~---~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~-rs~~~~~~L~~ 159 (184)
++.+|||+|++.||..||||||+|+|+. .+... +++.+.+.+...+..++.+++|||||++|. +|..+++.|+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~- 83 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG- 83 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-
Confidence 4588999999999999999999999985 32210 011122455666666666899999999988 9999999999
Q ss_pred ccCCCeeeccccHHHHHhCCCCCC
Q 029984 160 AGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 160 ~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
.||++|++|+|| |.+ +|++
T Consensus 84 ~G~~~v~~l~GG---W~~--~p~~ 102 (230)
T 2eg4_A 84 LGGLEVQLWTEG---WEP--YATE 102 (230)
T ss_dssp HTTCCEEEECSS---CGG--GCCB
T ss_pred cCCceEEEeCCC---Ccc--Cccc
Confidence 999999999999 876 6663
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.74 E-value=1.5e-19 Score=153.69 Aligned_cols=86 Identities=33% Similarity=0.475 Sum_probs=0.0
Q ss_pred HHHHHh-CCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHH
Q 029984 80 AHELLQ-AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL 158 (184)
Q Consensus 80 ~~~~~~-~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~ 158 (184)
+.++++ ++.+|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||..++..|+
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~~C~~G~rs~~a~~~L~ 446 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHG------------KLLETDLPFNKNDVIYVHCQSGIRSSIAIGILE 446 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHH------------HHHHHHhhCCCCCeEEEECCCChHHHHHHHHHH
Confidence 334443 3478999999999999999999999983 445555668889999999999999999999999
Q ss_pred HccCCCeeeccccHHHHHh
Q 029984 159 NAGFAGITDIAGGFAAWRQ 177 (184)
Q Consensus 159 ~~G~~~v~~l~GG~~~W~~ 177 (184)
+.||++|++|+|||.+|++
T Consensus 447 ~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 447 HKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -------------------
T ss_pred HcCCCCEEEecChHHHHhh
Confidence 9999999999999999975
No 60
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.72 E-value=1.6e-18 Score=147.39 Aligned_cols=121 Identities=17% Similarity=0.156 Sum_probs=92.5
Q ss_pred CCccccccccccCcccc----cCCCCcccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHH
Q 029984 51 SKILSFCPKASLRGNLE----AVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKF 126 (184)
Q Consensus 51 ~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~ 126 (184)
|.|.......|..++.. ..+....++++++++++.++ +|||+|++.||..||||||+|+|+. ..+
T Consensus 247 p~~~~~~~~~N~~G~~~~~~~~~~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA~~i~~~----------~~~ 315 (474)
T 3tp9_A 247 PIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGSLNIPWN----------KSF 315 (474)
T ss_dssp CTTHHHHHHHHHHCCCCHHHHCCCEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTCEECCSS----------TTH
T ss_pred CccHHHHHhhhccCcccccccccCCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCeEEECcc----------hHH
Confidence 33433333445444332 24456678999999998887 9999999999999999999999984 123
Q ss_pred HHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
........+++++|||||+.|. +..+++.|+..||++|+.|.+|+.+|+.+|.|++
T Consensus 316 ~~~~~~l~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~ 371 (474)
T 3tp9_A 316 VTWAGWLLPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVA 371 (474)
T ss_dssp HHHHHHHCCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEE
T ss_pred HHHHHhcCCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccc
Confidence 3333333478899999999876 5679999999999999986779999999887754
No 61
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.72 E-value=1.9e-17 Score=121.48 Aligned_cols=110 Identities=10% Similarity=0.103 Sum_probs=73.0
Q ss_pred CCcccCHHHHHHHHhC---CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCC------CCHHHHHHHHhcCCCCCeEE
Q 029984 71 VPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMT------KNLKFVEEVSTRFRKHDEII 141 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~------~~~~~~~~~~~~l~~~~~iv 141 (184)
....++++++.+++++ +.+|||||++.||..||||||+|||+..+. .+.. .-++.....+....+.+.||
T Consensus 18 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~-~~~~~~~l~~~lp~~~~~l~~~~~~~~~VV 96 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAIS-PGVTASWIEAHLPDDSKDTWKKRGNVEYVV 96 (157)
T ss_dssp -CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCC-TTCCHHHHHHTSCHHHHHHHHTTTTSSEEE
T ss_pred CCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcC-CCCcHHHHHHHcCHHHHHHHHhcCCCCEEE
Confidence 3456889999988864 578999999999999999999999986432 1110 00111222233333455689
Q ss_pred EEcCCChh----HHHHHHHHH----Hc----cCC-CeeeccccHHHHHhCCCCC
Q 029984 142 VGCQSGKR----SMMAATDLL----NA----GFA-GITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 142 v~c~~g~r----s~~~~~~L~----~~----G~~-~v~~l~GG~~~W~~~g~p~ 182 (184)
+||.++.+ +..+++.|. +. |+. +|++|+||+.+|++. +|.
T Consensus 97 vy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 149 (157)
T 2gwf_A 97 LLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 149 (157)
T ss_dssp EECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGG
T ss_pred EEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chh
Confidence 99987643 234555554 22 454 399999999999874 654
No 62
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.72 E-value=1.8e-17 Score=121.42 Aligned_cols=112 Identities=11% Similarity=0.121 Sum_probs=74.4
Q ss_pred CCCCcccCHHHHHHHHhC---CCeEEEcCChhhHhcCCCCCcEEeccccccCCCCC------CCHHHHHHHHhcCCCCCe
Q 029984 69 VGVPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMT------KNLKFVEEVSTRFRKHDE 139 (184)
Q Consensus 69 ~~~~~~i~~~~~~~~~~~---~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~------~~~~~~~~~~~~l~~~~~ 139 (184)
......++++++.+++++ +.+|||||++.||..||||||+|||+..+. .+.. .-++.....+....+.+.
T Consensus 11 ~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~-~~~~~~~l~~~lp~~~~~~~~~~~~~~~ 89 (157)
T 1whb_A 11 TKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAIS-PGVTASWIEAHLPDDSKDTWKKRGNVEY 89 (157)
T ss_dssp CCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCC-TTCCHHHHHHSCCTTHHHHHHGGGTSSE
T ss_pred cccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHcc-CCCcHHHHHHHCChHHHHHHHhcCCCCE
Confidence 345567899999988864 578999999999999999999999985332 1110 000111122222223456
Q ss_pred EEEEcCCChh----HHHHHHHHHHc--------cCC-CeeeccccHHHHHhCCCCC
Q 029984 140 IIVGCQSGKR----SMMAATDLLNA--------GFA-GITDIAGGFAAWRQNGLPT 182 (184)
Q Consensus 140 ivv~c~~g~r----s~~~~~~L~~~--------G~~-~v~~l~GG~~~W~~~g~p~ 182 (184)
||+||..+.+ +..+++.|.+. ||. +|++|+||+.+|.+. +|.
T Consensus 90 VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 144 (157)
T 1whb_A 90 VVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157)
T ss_dssp EEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG
T ss_pred EEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chh
Confidence 8999987643 34556666632 454 399999999999874 654
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.71 E-value=6.6e-17 Score=131.41 Aligned_cols=112 Identities=14% Similarity=0.098 Sum_probs=91.2
Q ss_pred CCcccCHHHHHHHHhCC----CeEEEcC--------C-hhhH-hcCCCCCcEEecccccc-----CCCCCCCHHHHHHHH
Q 029984 71 VPTSVPVRVAHELLQAG----HRYLDVR--------T-PEEF-SAGHATGAINVPYMYRV-----GSGMTKNLKFVEEVS 131 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~~----~~liDvR--------~-~~e~-~~ghIpgAi~ip~~~~~-----~~~~~~~~~~~~~~~ 131 (184)
.-..|+++++.+++..+ +++||++ + ..|| +++|||||++++++.+. ..+++.+++.++..+
T Consensus 26 ~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l 105 (327)
T 3utn_X 26 LFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAM 105 (327)
T ss_dssp SCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHH
T ss_pred cccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHH
Confidence 34469999999988632 6789985 2 4577 68999999999986543 235677888888877
Q ss_pred hc--CCCCCeEEEEcCCCh-hHHHHHHHHHHccCCCeeeccccHHHHHhCCCCCC
Q 029984 132 TR--FRKHDEIIVGCQSGK-RSMMAATDLLNAGFAGITDIAGGFAAWRQNGLPTE 183 (184)
Q Consensus 132 ~~--l~~~~~ivv~c~~g~-rs~~~~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 183 (184)
.. ++++++||||++.+. .|.+++|+|+..|+++|++|+|| .+|.++|+|++
T Consensus 106 ~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~ 159 (327)
T 3utn_X 106 SNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLD 159 (327)
T ss_dssp HHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCB
T ss_pred HHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcc
Confidence 76 588999999998654 68899999999999999999877 89999999986
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.42 E-value=2.5e-13 Score=115.27 Aligned_cols=81 Identities=21% Similarity=0.294 Sum_probs=63.3
Q ss_pred hCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCC
Q 029984 85 QAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAG 164 (184)
Q Consensus 85 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~ 164 (184)
+++++|||+|++.+|..||||||+|+|+. ..+..+....++++++||+||+ +.++.++++.|+..||++
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~ 362 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTINIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYDD 362 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCEECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcEECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhccc
Confidence 35689999999999999999999999984 1233444444688999999999 558999999999999999
Q ss_pred eee-ccccHHHHH
Q 029984 165 ITD-IAGGFAAWR 176 (184)
Q Consensus 165 v~~-l~GG~~~W~ 176 (184)
|+. ++|+...|.
T Consensus 363 v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 363 IAGYQLPQSKIQT 375 (466)
T ss_dssp EEEEECCC-----
T ss_pred ccccccCcccccH
Confidence 987 677665543
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.26 E-value=2.7e-06 Score=61.50 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=52.6
Q ss_pred CHHHHHHHHhCC-CeEEEcCChhh------------HhcC-CCCCcEEeccccccCCCCCCCHHHHHHHHhcC-CCCCeE
Q 029984 76 PVRVAHELLQAG-HRYLDVRTPEE------------FSAG-HATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEI 140 (184)
Q Consensus 76 ~~~~~~~~~~~~-~~liDvR~~~e------------~~~g-hIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~i 140 (184)
+.+++..+.+.+ ..|||+|++.| |... +|.|.+|+|.... ....+.+......+ ..+.+|
T Consensus 31 ~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-----~~~~~~~~~~~~~l~~~~~pV 105 (156)
T 2f46_A 31 TKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-----DIQKHDVETFRQLIGQAEYPV 105 (156)
T ss_dssp CGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-----TCCHHHHHHHHHHHHTSCSSE
T ss_pred CHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-----CCCHHHHHHHHHHHHhCCCCE
Confidence 445666665555 67999997765 3334 5998999998421 12234444444433 347899
Q ss_pred EEEcCCChhHHHHHHHH-HHccCC
Q 029984 141 IVGCQSGKRSMMAATDL-LNAGFA 163 (184)
Q Consensus 141 vv~c~~g~rs~~~~~~L-~~~G~~ 163 (184)
+|||.+|.|+..++..+ ...|++
T Consensus 106 lvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 106 LAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCHHHHHHHHHHHcCCC
Confidence 99999999987554332 345653
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=95.92 E-value=0.014 Score=40.87 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=47.7
Q ss_pred HHHHHHHHhCC-CeEEEcCChhhHhcCCCCCc--EEeccccccCCCCCCCHHHHHHHHhc----CCCCCeEEEEcCCCh-
Q 029984 77 VRVAHELLQAG-HRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK- 148 (184)
Q Consensus 77 ~~~~~~~~~~~-~~liDvR~~~e~~~ghIpgA--i~ip~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ivv~c~~g~- 148 (184)
.++++.+.+.+ ..|||+|+..|......+|- +++|+.+. .....+.+...... +..+.+|+|+|..|.
T Consensus 25 ~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~ 100 (150)
T 4erc_A 25 PAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDF----CPPAPDQIDRFVQIVDEANARGEAVGVHCALGFG 100 (150)
T ss_dssp HHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTT----SCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSH
T ss_pred HHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCC----CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
Confidence 56666666667 57999998766544344443 45665322 11223333333322 345789999999886
Q ss_pred hHHHHH-H-HHHHccCC
Q 029984 149 RSMMAA-T-DLLNAGFA 163 (184)
Q Consensus 149 rs~~~~-~-~L~~~G~~ 163 (184)
|+..++ . .+...|++
T Consensus 101 Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 101 RTGTMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 776433 3 33446663
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=95.09 E-value=0.036 Score=38.64 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=46.3
Q ss_pred CHHHHHHHHhCC-CeEEEcCChhhHhcCCCC--CcEEeccccccCCCCCCCHHHHHHHHh----cCCCCCeEEEEcCCCh
Q 029984 76 PVRVAHELLQAG-HRYLDVRTPEEFSAGHAT--GAINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSGK 148 (184)
Q Consensus 76 ~~~~~~~~~~~~-~~liDvR~~~e~~~ghIp--gAi~ip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv~c~~g~ 148 (184)
..+.+..+.+.+ ..|||+|+..|+....++ +-+++|+.+.. ....+.+..... .+..+.+|+|+|..|.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~----~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~ 100 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFC----PPAPDQIDRFVQIVDEANARGEAVGVHCALGF 100 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTC----CCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCC----CCCHHHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 445666666666 578999988665433333 24566663221 122233333222 2345789999999875
Q ss_pred -hHHHHH-HHHHHc-cC
Q 029984 149 -RSMMAA-TDLLNA-GF 162 (184)
Q Consensus 149 -rs~~~~-~~L~~~-G~ 162 (184)
|+..++ ..|... |+
T Consensus 101 ~Rsg~~~~~~l~~~~~~ 117 (151)
T 2img_A 101 GRTGTMLACYLVKERGL 117 (151)
T ss_dssp SHHHHHHHHHHHHHHCC
T ss_pred ChHHHHHHHHHHHHhCc
Confidence 766543 333333 65
No 68
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=94.09 E-value=0.0072 Score=44.09 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=20.2
Q ss_pred CeEEEcCChhhHhcCCCCCcEEeccc
Q 029984 88 HRYLDVRTPEEFSAGHATGAINVPYM 113 (184)
Q Consensus 88 ~~liDvR~~~e~~~ghIpgAi~ip~~ 113 (184)
.++||||++.||. |||+|||..
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg 143 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQL 143 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChh
Confidence 3899999999999 999999974
No 69
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=93.97 E-value=0.092 Score=36.56 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=41.2
Q ss_pred HHHHHhCC-CeEEEcCChhhHhcCCCCC---cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHH
Q 029984 80 AHELLQAG-HRYLDVRTPEEFSAGHATG---AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMA 153 (184)
Q Consensus 80 ~~~~~~~~-~~liDvR~~~e~~~ghIpg---Ai~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~ 153 (184)
+..+.+.+ ..|||+|+..+ ...|+ -+++|..+......... ++.++.+...+..+.+|+|+|..| .||..+
T Consensus 22 ~~~L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 22 LEDLQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp HHHHHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 34444556 56899997543 11232 25677642211111110 122222222234577999999988 588643
Q ss_pred --HHHHHHccC
Q 029984 154 --ATDLLNAGF 162 (184)
Q Consensus 154 --~~~L~~~G~ 162 (184)
+..+...|+
T Consensus 99 v~ayLm~~~~~ 109 (145)
T 2nt2_A 99 VIAYAMKEYGW 109 (145)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhCC
Confidence 455555665
No 70
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=93.85 E-value=0.11 Score=36.24 Aligned_cols=85 Identities=8% Similarity=-0.025 Sum_probs=44.8
Q ss_pred HHHHHHHhCC-CeEEEcCChhhHhc-------CCCCCcEEeccccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEcCCC
Q 029984 78 RVAHELLQAG-HRYLDVRTPEEFSA-------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSG 147 (184)
Q Consensus 78 ~~~~~~~~~~-~~liDvR~~~e~~~-------ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c~~g 147 (184)
+++..+.+.+ ..|||+|+..|... ..| .-+++|......+......+.+...+..+ ..+.+|+|+|..|
T Consensus 24 ~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi-~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~aG 102 (151)
T 1xri_A 24 ANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRG 102 (151)
T ss_dssp HHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTC-EEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSSS
T ss_pred cCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCC-eEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 4444444445 67999998655321 112 23566653211111112233444444332 2467999999988
Q ss_pred h-hHHHHH-HHHHHccCC
Q 029984 148 K-RSMMAA-TDLLNAGFA 163 (184)
Q Consensus 148 ~-rs~~~~-~~L~~~G~~ 163 (184)
. |+..++ ..|...|++
T Consensus 103 ~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 103 KHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSHHHHHHHHHHHHTTBC
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 6 876654 444455653
No 71
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=93.45 E-value=0.2 Score=37.29 Aligned_cols=83 Identities=19% Similarity=0.175 Sum_probs=44.0
Q ss_pred CHHHHHHHHhCC-CeEEEcCChhhHhcCCCC---------C--cEEeccccccCCCCCCCHHHHHHHHh----cCCCCCe
Q 029984 76 PVRVAHELLQAG-HRYLDVRTPEEFSAGHAT---------G--AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDE 139 (184)
Q Consensus 76 ~~~~~~~~~~~~-~~liDvR~~~e~~~ghIp---------g--Ai~ip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ 139 (184)
..+++..+.+.+ ..|||+|+..|...-.++ | -+++|+.+.. ....+.+..... .+..+.+
T Consensus 60 ~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~~----~p~~~~~~~~~~~i~~~~~~~~~ 135 (212)
T 1fpz_A 60 VQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGG----TPDIASCCEIMEELTTCLKNYRK 135 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTTC----CCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCCC----CCCHHHHHHHHHHHHHHHhCCCC
Confidence 345565555555 679999998765432111 2 2455553211 112222222222 2335779
Q ss_pred EEEEcCCCh-hHHHHH-HHHHHc--cC
Q 029984 140 IIVGCQSGK-RSMMAA-TDLLNA--GF 162 (184)
Q Consensus 140 ivv~c~~g~-rs~~~~-~~L~~~--G~ 162 (184)
|+|+|..|. |+..++ ..|... |+
T Consensus 136 VlVHC~aG~gRTg~~~a~~L~~~~~g~ 162 (212)
T 1fpz_A 136 TLIHSYGGLGRSCLVAACLLLYLSDTI 162 (212)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHCSSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhccCC
Confidence 999999876 766543 444443 55
No 72
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=93.41 E-value=0.099 Score=37.24 Aligned_cols=80 Identities=20% Similarity=0.292 Sum_probs=40.3
Q ss_pred HHHhCC-CeEEEcCChhhHhcCCCCC--cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHH--H
Q 029984 82 ELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMA--A 154 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~--~ 154 (184)
.+.+.+ ..|||+|+..+.. ...| -+++|..+......... .+.++.+...+..+.+|+|+|..| .|+..+ +
T Consensus 32 ~L~~~gI~~Vi~l~~~~~~~--~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~a 109 (164)
T 2hcm_A 32 LLVRAGITLCVNVSRQQPGP--RAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTA 109 (164)
T ss_dssp HHHHTTEEEEEECSSSCCCC--CCTTCEEEECCCCSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHHHHH
T ss_pred HHHHCCCeEEEEcCCCCCCC--CCCCCEEEEEeCcCCCCchHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHH
Confidence 344456 5689999865421 1122 25566532211111000 111111222234578999999988 587754 3
Q ss_pred HHHHHccCC
Q 029984 155 TDLLNAGFA 163 (184)
Q Consensus 155 ~~L~~~G~~ 163 (184)
..+...|++
T Consensus 110 yLm~~~~~~ 118 (164)
T 2hcm_A 110 YLMRHRGHS 118 (164)
T ss_dssp HHHHHSCCC
T ss_pred HHHHHhCCC
Confidence 555566763
No 73
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=92.91 E-value=0.2 Score=35.45 Aligned_cols=81 Identities=11% Similarity=0.095 Sum_probs=39.8
Q ss_pred HHHhCC-CeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHH--HHH
Q 029984 82 ELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMA--ATD 156 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~--~~~ 156 (184)
.+.+.+ ..|||+|+..+.....| .-+++|..+......... .+.++.+...+..+.+|+|+|..| .|+..+ +..
T Consensus 28 ~L~~~gI~~Vi~l~~~~~~~~~~i-~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayl 106 (160)
T 1yz4_A 28 QLGRNKITHIISIHESPQPLLQDI-TYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYV 106 (160)
T ss_dssp HHHHTTCCEEEEECSSCCCCCTTC-EEEEECCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHHHHH
T ss_pred HHHHCCCeEEEEccCCCCCccCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHHHH
Confidence 333455 57899997643211111 125666632211111111 111222222223577999999988 587743 344
Q ss_pred HHHccCC
Q 029984 157 LLNAGFA 163 (184)
Q Consensus 157 L~~~G~~ 163 (184)
+...|++
T Consensus 107 m~~~~~~ 113 (160)
T 1yz4_A 107 MTVTGLG 113 (160)
T ss_dssp HHHHCCC
T ss_pred HHHcCCC
Confidence 4556763
No 74
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=92.65 E-value=0.58 Score=36.88 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=27.3
Q ss_pred CcccCHHHHHHHHhCC-CeEEEcCChhhHhcC----CCCCc--EEeccc
Q 029984 72 PTSVPVRVAHELLQAG-HRYLDVRTPEEFSAG----HATGA--INVPYM 113 (184)
Q Consensus 72 ~~~i~~~~~~~~~~~~-~~liDvR~~~e~~~g----hIpgA--i~ip~~ 113 (184)
+..++.+++..+.+-+ -.|||.|++.|.... ..+|. +|+|..
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~ 101 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFP 101 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCC
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCc
Confidence 3446677877776656 579999999885422 33454 466653
No 75
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=92.64 E-value=0.28 Score=33.94 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=40.3
Q ss_pred HHHhCC-CeEEEcCChhhH-hcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCCh-hHHHH--HH
Q 029984 82 ELLQAG-HRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSGK-RSMMA--AT 155 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~-~~ghIpgAi~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g~-rs~~~--~~ 155 (184)
.+.+.+ ..|||+++.... ...++ .-.++|..+......... ++.++.+......+.+|+|+|..|. ||..+ +.
T Consensus 24 ~L~~~gI~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~ay 102 (144)
T 3ezz_A 24 MLDALGITALLNVSSDCPNHFEGHY-QYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAY 102 (144)
T ss_dssp HHHHTTCCEEEECSSSCCCTTTTTS-EEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHH
T ss_pred HHHHCCCeEEEEccCCCCccCCCCc-eEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHHH
Confidence 344455 579999974321 11111 235677643322222221 2222222222345679999999886 77643 34
Q ss_pred HHHHccC
Q 029984 156 DLLNAGF 162 (184)
Q Consensus 156 ~L~~~G~ 162 (184)
.+...|+
T Consensus 103 lm~~~~~ 109 (144)
T 3ezz_A 103 LMMKKRV 109 (144)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 4444665
No 76
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=92.14 E-value=0.25 Score=35.19 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=39.1
Q ss_pred HHHhCC-CeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHH--HHH
Q 029984 82 ELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMA--ATD 156 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~--~~~ 156 (184)
.+.+.+ ..|||+|+..+-...++ .-+++|..+......... .+.++.+...+..+.+|+|+|..| .||..+ +..
T Consensus 27 ~L~~~gI~~Vi~l~~~~~~~~~~i-~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayL 105 (165)
T 1wrm_A 27 QLSKNKVTHILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYI 105 (165)
T ss_dssp HHHHTTEEEEEECSTTCCCCSTTC-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHH
T ss_pred HHHHCCCcEEEEecCCCCCCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHHH
Confidence 343455 56899997653211111 125666532211111110 112222222234578999999988 587763 344
Q ss_pred HHHccC
Q 029984 157 LLNAGF 162 (184)
Q Consensus 157 L~~~G~ 162 (184)
+...|+
T Consensus 106 m~~~~~ 111 (165)
T 1wrm_A 106 MTVTDF 111 (165)
T ss_dssp HHTSSC
T ss_pred HHHcCC
Confidence 444465
No 77
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=92.14 E-value=0.53 Score=32.81 Aligned_cols=85 Identities=13% Similarity=0.039 Sum_probs=42.5
Q ss_pred HHHHHHhCC-CeEEEcCChhhHhc--CCCC-C--cEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhH
Q 029984 79 VAHELLQAG-HRYLDVRTPEEFSA--GHAT-G--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRS 150 (184)
Q Consensus 79 ~~~~~~~~~-~~liDvR~~~e~~~--ghIp-g--Ai~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs 150 (184)
++..+.+.+ ..|||+|+..|... ...+ | -+++|..+......... ++.++.+...+..+.+|+|+|..| .|+
T Consensus 25 d~~~L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS 104 (154)
T 2r0b_A 25 KLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104 (154)
T ss_dssp GHHHHHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred cHHHHHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChH
Confidence 344444556 57899998766421 1222 2 24566532211111110 111122222223577999999988 587
Q ss_pred HHH--HHHHHHccCC
Q 029984 151 MMA--ATDLLNAGFA 163 (184)
Q Consensus 151 ~~~--~~~L~~~G~~ 163 (184)
..+ +..+...|++
T Consensus 105 ~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 105 AAFVIAYIMETFGMK 119 (154)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 753 3444456753
No 78
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=91.59 E-value=0.35 Score=35.39 Aligned_cols=80 Identities=16% Similarity=0.129 Sum_probs=40.1
Q ss_pred HHHhCC-CeEEEcCChhhHhcCCCCCc--EEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHH--H
Q 029984 82 ELLQAG-HRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMA--A 154 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~~ghIpgA--i~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~--~ 154 (184)
.+...+ ..|||+|+..+ ....+|- +++|+.+......... .+.++.+...+..+.+|+|+|..| .|+..+ +
T Consensus 46 ~L~~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~a 123 (190)
T 2wgp_A 46 LLQARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIA 123 (190)
T ss_dssp HHHHTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHH
T ss_pred HHHHCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHH
Confidence 334455 57999997532 1123332 4566532211111111 111222222223577899999988 587643 4
Q ss_pred HHHHHccCC
Q 029984 155 TDLLNAGFA 163 (184)
Q Consensus 155 ~~L~~~G~~ 163 (184)
..+...|++
T Consensus 124 yLm~~~~~s 132 (190)
T 2wgp_A 124 YLMKFHNVC 132 (190)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHcCCC
Confidence 555556653
No 79
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=91.49 E-value=0.25 Score=34.52 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=42.9
Q ss_pred HHHHHH-hCC-CeEEEcCChhhHhc----------CCCCCcEEeccccccCCCCCCCHHHHHHHHh----cCCCCCeEEE
Q 029984 79 VAHELL-QAG-HRYLDVRTPEEFSA----------GHATGAINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIV 142 (184)
Q Consensus 79 ~~~~~~-~~~-~~liDvR~~~e~~~----------ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv 142 (184)
+..+++ +.+ ..|||+|+..|... ..| .-+++|..+... ....+.+..... .+..+.+|+|
T Consensus 19 ~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi-~~~~~p~~d~~~---~~~~~~~~~~~~~i~~~~~~~~~vlV 94 (157)
T 3rgo_A 19 MTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGV-EQLRLSTVDMTG---VPTLANLHKGVQFALKYQALGQCVYV 94 (157)
T ss_dssp GHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTC-EEEEECCCTTTS---SCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHcCCCEEEECccccccccccCCHHHHHHCCC-eEEEecCCCCCC---CChHHHHHHHHHHHHHHHHCCCEEEE
Confidence 334443 455 56899998765432 111 235666642211 122233333222 2345679999
Q ss_pred EcCCCh-hHHHH--HHHHHHccCC
Q 029984 143 GCQSGK-RSMMA--ATDLLNAGFA 163 (184)
Q Consensus 143 ~c~~g~-rs~~~--~~~L~~~G~~ 163 (184)
+|..|. |+..+ +..+...|++
T Consensus 95 HC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 95 HCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp ESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCChHHHHHHHHHHHHcCCC
Confidence 999887 87755 3444445663
No 80
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=90.70 E-value=0.36 Score=34.78 Aligned_cols=81 Identities=11% Similarity=0.181 Sum_probs=40.2
Q ss_pred HHHhCC-CeEEEcCChhhHh----------cCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCC-CCeEEEEcCCCh
Q 029984 82 ELLQAG-HRYLDVRTPEEFS----------AGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRK-HDEIIVGCQSGK 148 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~----------~ghIpgAi~ip~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~ivv~c~~g~ 148 (184)
.+.+.+ ..|||+++..++. ...| .-+++|..+......... .+.++.+...+.. +.+|+|+|..|.
T Consensus 48 ~L~~~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~ 126 (183)
T 3f81_A 48 KLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGI-TYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGY 126 (183)
T ss_dssp HHHHHTCCEEEETTBSSSTTSBCCCTGGGTTTTC-EEEECCCCCSTTSCGGGGHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred HHHHCCCcEEEECCCCccccccccchhhcccCCC-EEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCCeEEEECCCCc
Confidence 333445 5799999766532 1111 124666532221111111 1222222222233 678999999886
Q ss_pred -hHHH-HH-HHHHHccCC
Q 029984 149 -RSMM-AA-TDLLNAGFA 163 (184)
Q Consensus 149 -rs~~-~~-~~L~~~G~~ 163 (184)
|+.. ++ ..+...|++
T Consensus 127 ~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 127 SRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp SHHHHHHHHHHHHHHCCC
T ss_pred chHHHHHHHHHHHHhCCC
Confidence 8765 33 444456663
No 81
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=90.67 E-value=0.57 Score=34.16 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=40.0
Q ss_pred HHHhCC-CeEEEcCChhhHhcCCCCCc--EEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHH--H
Q 029984 82 ELLQAG-HRYLDVRTPEEFSAGHATGA--INVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMA--A 154 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~~ghIpgA--i~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~--~ 154 (184)
.+...+ ..|||+|...+ ....+|- +++|..+......... .+.++.+...+..+.+|+|+|..| .||..+ +
T Consensus 40 ~L~~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~a 117 (188)
T 2esb_A 40 MLSSNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLA 117 (188)
T ss_dssp HHHHTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHH
T ss_pred HHHHCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHH
Confidence 333455 57899997532 1122332 4566532211111110 112222222234578999999988 587743 4
Q ss_pred HHHHHccCC
Q 029984 155 TDLLNAGFA 163 (184)
Q Consensus 155 ~~L~~~G~~ 163 (184)
..+...|++
T Consensus 118 yLm~~~~~s 126 (188)
T 2esb_A 118 YLMKYHAMS 126 (188)
T ss_dssp HHHHHSCCC
T ss_pred HHHHHcCCC
Confidence 555566763
No 82
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=90.33 E-value=0.5 Score=32.69 Aligned_cols=80 Identities=13% Similarity=0.081 Sum_probs=39.5
Q ss_pred HHHhCC-CeEEEcCChhhHhcCCCCC--cEEeccccccCCCCCC-CHHHHHHHHhcCCCCCeEEEEcCCCh-hHHHH--H
Q 029984 82 ELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTK-NLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMA--A 154 (184)
Q Consensus 82 ~~~~~~-~~liDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ivv~c~~g~-rs~~~--~ 154 (184)
.+.+.+ ..||+++...+ .....| -.++|..+........ -++.++.+...+..+.+|+|+|..|. ||..+ +
T Consensus 24 ~L~~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~a 101 (144)
T 3s4e_A 24 TLKKNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIG 101 (144)
T ss_dssp HHHHTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHH
T ss_pred HHHHcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHH
Confidence 344455 57899986332 111112 2566664322211111 11222222222345678999999886 76543 3
Q ss_pred HHHHHccCC
Q 029984 155 TDLLNAGFA 163 (184)
Q Consensus 155 ~~L~~~G~~ 163 (184)
..+...|++
T Consensus 102 yLm~~~~~~ 110 (144)
T 3s4e_A 102 FLMNSEQTS 110 (144)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHcCCC
Confidence 444556663
No 83
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=90.02 E-value=0.53 Score=35.26 Aligned_cols=77 Identities=14% Similarity=0.131 Sum_probs=38.3
Q ss_pred hCC-CeEEEcCChhh-HhcCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHH--HHHHHH
Q 029984 85 QAG-HRYLDVRTPEE-FSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--AATDLL 158 (184)
Q Consensus 85 ~~~-~~liDvR~~~e-~~~ghIpgAi~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~--~~~~L~ 158 (184)
+.+ ..|||++...+ +...+| .-+++|+.+......... .+.++.+...+..+.+|+|+|..| .|+.. +++.+.
T Consensus 29 ~~GIt~VInl~~e~~~~~~~gi-~y~~ipi~D~~~~~l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~ 107 (211)
T 2g6z_A 29 NLHITALLNVSRRTSEACMTHL-HYKWIPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107 (211)
T ss_dssp HHTCCEEEECSSCCCCTTCTTS-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred HCCCCEEEEcCCCCccccccCC-EEEEeeCCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHH
Confidence 344 57899997532 111111 235666642221111111 122222222234578899999988 48764 345555
Q ss_pred HccC
Q 029984 159 NAGF 162 (184)
Q Consensus 159 ~~G~ 162 (184)
..|+
T Consensus 108 ~~g~ 111 (211)
T 2g6z_A 108 TKQF 111 (211)
T ss_dssp HHCC
T ss_pred HcCC
Confidence 5665
No 84
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=87.79 E-value=2.7 Score=31.41 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=19.6
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHccC
Q 029984 135 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 162 (184)
Q Consensus 135 ~~~~~ivv~c~~g-~rs~~~--~~~L~~~G~ 162 (184)
..+.+|+|+|..| .||..+ ++.+...|+
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 167 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDM 167 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4577899999988 487753 345555665
No 85
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=87.57 E-value=2.2 Score=31.45 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=19.1
Q ss_pred CCCeEEEEcCCC-hhHHHH--HHHHHHccC
Q 029984 136 KHDEIIVGCQSG-KRSMMA--ATDLLNAGF 162 (184)
Q Consensus 136 ~~~~ivv~c~~g-~rs~~~--~~~L~~~G~ 162 (184)
.+.+|+|+|..| .||..+ +..+...|+
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~ 159 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENM 159 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCC
Confidence 567899999988 487754 345555665
No 86
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=86.90 E-value=4.4 Score=28.09 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=18.5
Q ss_pred CCCeEEEEcCCCh-hHHHH-HHHHHHc-cCC
Q 029984 136 KHDEIIVGCQSGK-RSMMA-ATDLLNA-GFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~g~-rs~~~-~~~L~~~-G~~ 163 (184)
++.+|+|+|..|. |+..+ +..|... |++
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 3789999999875 76543 3444444 653
No 87
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=86.55 E-value=0.7 Score=32.74 Aligned_cols=29 Identities=7% Similarity=0.187 Sum_probs=19.8
Q ss_pred CCCCeEEEEcCCCh-hHHHH--HHHHHHccCC
Q 029984 135 RKHDEIIVGCQSGK-RSMMA--ATDLLNAGFA 163 (184)
Q Consensus 135 ~~~~~ivv~c~~g~-rs~~~--~~~L~~~G~~ 163 (184)
..+.+|+|+|..|. ||..+ +..+...|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 45679999999886 76543 4555556663
No 88
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=85.12 E-value=1.3 Score=31.67 Aligned_cols=28 Identities=18% Similarity=0.218 Sum_probs=19.0
Q ss_pred CCCeEEEEcCCC-hhHHHH--HHHHHHccCC
Q 029984 136 KHDEIIVGCQSG-KRSMMA--ATDLLNAGFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~g-~rs~~~--~~~L~~~G~~ 163 (184)
.+.+|+|+|..| .||..+ +..+...|..
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 467899999988 477653 3444555654
No 89
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=83.82 E-value=1.7 Score=30.14 Aligned_cols=23 Identities=22% Similarity=0.123 Sum_probs=15.3
Q ss_pred HHHHHHHHhCC-CeEEEcCChhhH
Q 029984 77 VRVAHELLQAG-HRYLDVRTPEEF 99 (184)
Q Consensus 77 ~~~~~~~~~~~-~~liDvR~~~e~ 99 (184)
.+++..+.+.+ ..|||+|+..|.
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~ 41 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEI 41 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHH
T ss_pred HHHHHHHHHCCCCEEEEcCchhhh
Confidence 34555555555 579999998664
No 90
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=83.65 E-value=3.6 Score=29.68 Aligned_cols=83 Identities=18% Similarity=0.202 Sum_probs=41.5
Q ss_pred cCHHHHHHHH-hCC-CeEEEcCChhh----HhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc------CCCCCeEEE
Q 029984 75 VPVRVAHELL-QAG-HRYLDVRTPEE----FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR------FRKHDEIIV 142 (184)
Q Consensus 75 i~~~~~~~~~-~~~-~~liDvR~~~e----~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~------l~~~~~ivv 142 (184)
.+.++..+.+ +.+ ..|||++++.+ +...+| .-+++|..+ +.....+.+...... ..++.+|+|
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~pi~d----~~~~~~~~~~~~~~~i~~~~~~~~~~~VlV 122 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDD----GAPPSNQIVDDWLSLVKIKFREEPGCCIAV 122 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC-EEEECCCCS----SSCCCSHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc-EEEEecCCC----CCCCCHHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4444444444 445 56899997532 222222 124555321 111222332322222 246789999
Q ss_pred EcCCCh-hHHHH-HHHHHHccC
Q 029984 143 GCQSGK-RSMMA-ATDLLNAGF 162 (184)
Q Consensus 143 ~c~~g~-rs~~~-~~~L~~~G~ 162 (184)
+|..|. |+..+ +..|...|+
T Consensus 123 HC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 123 HCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp ECSSSSTTHHHHHHHHHHTTTC
T ss_pred ECCCCCCHHHHHHHHHHHHcCC
Confidence 999775 76643 344444555
No 91
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=83.54 E-value=1.9 Score=31.03 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=32.5
Q ss_pred HHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+..++....++.+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 36 L~~ll~~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~ 81 (185)
T 2jgn_A 36 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 81 (185)
T ss_dssp HHHHHHHC-CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC----
T ss_pred HHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCC
Confidence 4444444545678999999988888999999999984 777888865
No 92
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=83.18 E-value=2.1 Score=31.22 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=35.9
Q ss_pred CeEEEcCChhhHh-cCCCCCcEEeccccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCC-hhHHHHH--HHHHHccC
Q 029984 88 HRYLDVRTPEEFS-AGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMMAA--TDLLNAGF 162 (184)
Q Consensus 88 ~~liDvR~~~e~~-~ghIpgAi~ip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~rs~~~~--~~L~~~G~ 162 (184)
..|||+|++.+.. ..++ .-+++|............ .+.++.+......+.+|+|+|..| .|+..++ ..+...|.
T Consensus 75 ~~Vi~l~~~~~~~~~~~~-~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~ 153 (195)
T 2q05_A 75 KYVLNLTMDKYTLPNSNI-NIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKE 153 (195)
T ss_dssp SEEEECSSSCCCCTTCCC-EEEECCCCCSSSCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred CEEEEECCCCCCcccCCc-EEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHHHhCC
Confidence 3689999865321 1122 124555532111111100 122222222223567999999988 5776544 33334565
Q ss_pred C
Q 029984 163 A 163 (184)
Q Consensus 163 ~ 163 (184)
+
T Consensus 154 ~ 154 (195)
T 2q05_A 154 S 154 (195)
T ss_dssp S
T ss_pred C
Confidence 4
No 93
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=81.27 E-value=2.4 Score=30.84 Aligned_cols=74 Identities=12% Similarity=0.070 Sum_probs=34.5
Q ss_pred CeEEEcCChhhHhcCCCCC--cEEeccccccCCCCCC-CHHHHHHHHhcCCCCCeEEEEcCCCh-hHHHH--HHHHHHcc
Q 029984 88 HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTK-NLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMA--ATDLLNAG 161 (184)
Q Consensus 88 ~~liDvR~~~e~~~ghIpg--Ai~ip~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ivv~c~~g~-rs~~~--~~~L~~~G 161 (184)
..||+++.........++| -+++|.... ..... -++.++.+...+..+.+|+|+|..|. ||..+ +..+...|
T Consensus 67 t~Vlnv~~e~~~~~~~~~~i~y~~ip~~d~--~~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~ 144 (182)
T 2j16_A 67 DVVINVAEEANDLRMQVPAVEYHHYRWEHD--SQIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHN 144 (182)
T ss_dssp SEEEECCSCC--------CCEEEECCCSSG--GGGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CEEEEecCCCCCchhccCCceEEEEecCCC--chHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHHHHHHHHHHcC
Confidence 5689998654322222333 245565311 11110 11222222222345778999999885 77653 44555556
Q ss_pred CC
Q 029984 162 FA 163 (184)
Q Consensus 162 ~~ 163 (184)
++
T Consensus 145 ~s 146 (182)
T 2j16_A 145 LS 146 (182)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 94
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=78.61 E-value=2.7 Score=28.91 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=20.0
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHccCC
Q 029984 135 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGFA 163 (184)
Q Consensus 135 ~~~~~ivv~c~~g-~rs~~~--~~~L~~~G~~ 163 (184)
..+.+|+|+|..| .|+..+ +..+...|++
T Consensus 81 ~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred HcCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 3578999999988 587764 3444556753
No 95
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=76.37 E-value=3 Score=29.08 Aligned_cols=28 Identities=18% Similarity=0.223 Sum_probs=19.3
Q ss_pred CCCCeEEEEcCCC-hhHHHH--HHHHHHccC
Q 029984 135 RKHDEIIVGCQSG-KRSMMA--ATDLLNAGF 162 (184)
Q Consensus 135 ~~~~~ivv~c~~g-~rs~~~--~~~L~~~G~ 162 (184)
..+.+|+|+|..| .||..+ +..+...|+
T Consensus 83 ~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 83 SQNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred HcCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 3578999999988 587754 344445565
No 96
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=76.18 E-value=17 Score=25.34 Aligned_cols=28 Identities=25% Similarity=0.295 Sum_probs=18.6
Q ss_pred CCCeEEEEcCCCh-hHHHH-HHHHHH-ccCC
Q 029984 136 KHDEIIVGCQSGK-RSMMA-ATDLLN-AGFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~g~-rs~~~-~~~L~~-~G~~ 163 (184)
++.+|+|+|..|. |+..+ +..|.. .|++
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCCC
Confidence 5779999999875 76643 344443 6763
No 97
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=75.59 E-value=3.6 Score=28.27 Aligned_cols=28 Identities=29% Similarity=0.380 Sum_probs=19.7
Q ss_pred CCCeEEEEcCCC-hhHHH--HHHHHHHccCC
Q 029984 136 KHDEIIVGCQSG-KRSMM--AATDLLNAGFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~g-~rs~~--~~~~L~~~G~~ 163 (184)
.+.+|+|+|..| .|+.. ++..+...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999988 58773 33455566763
No 98
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=74.99 E-value=22 Score=28.41 Aligned_cols=80 Identities=11% Similarity=0.116 Sum_probs=41.5
Q ss_pred HHHHHHHhCC-CeEEEcCCh----hhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC-CCCCeEEEEcCCC-hhH
Q 029984 78 RVAHELLQAG-HRYLDVRTP----EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSG-KRS 150 (184)
Q Consensus 78 ~~~~~~~~~~-~~liDvR~~----~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivv~c~~g-~rs 150 (184)
+.+..+.+.+ ..|||+|+. ..+....| .-+++|+.+ +.....+.+......+ ..+.+|+|+|..| .|+
T Consensus 209 ~~~~~L~~~GI~~VInL~~~~y~~~~~~~~gi-~~~~ipi~D----~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~gRT 283 (348)
T 1ohe_A 209 TYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGF-DHHDLFFAD----GSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRT 283 (348)
T ss_dssp HHHHHHHHTTEEEEEECSCCSSCTHHHHTTTC-EEEECCCCT----TCCCCHHHHHHHHHHHHSCSSEEEEECSSSSHHH
T ss_pred HHHHHHHHcCCCEEEECCCCcCChhhhhcCCc-EEEEecCCC----CCCCCHHHHHHHHHHHHhCCCcEEEECCCCCChH
Confidence 4444454556 579999964 22332222 124556532 1122233343333332 4578999999988 476
Q ss_pred HHHH-HHHHH-ccC
Q 029984 151 MMAA-TDLLN-AGF 162 (184)
Q Consensus 151 ~~~~-~~L~~-~G~ 162 (184)
..++ ..|.. .|+
T Consensus 284 GtvvaayLm~~~g~ 297 (348)
T 1ohe_A 284 GTLIACYIMKHYRM 297 (348)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCC
Confidence 6533 33333 565
No 99
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=74.28 E-value=2.5 Score=33.19 Aligned_cols=86 Identities=12% Similarity=0.067 Sum_probs=41.8
Q ss_pred HHHHHHHHhCC-CeEEEcCChhhHhcC------------CCC--CcEEeccccccCCCCC-CCHHHHHHHHhcC-CCCCe
Q 029984 77 VRVAHELLQAG-HRYLDVRTPEEFSAG------------HAT--GAINVPYMYRVGSGMT-KNLKFVEEVSTRF-RKHDE 139 (184)
Q Consensus 77 ~~~~~~~~~~~-~~liDvR~~~e~~~g------------hIp--gAi~ip~~~~~~~~~~-~~~~~~~~~~~~l-~~~~~ 139 (184)
.+++..+.+.+ ..||+++...+.... ... .-+++|..+....... .-++.++.+...+ ..+.+
T Consensus 29 ~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~l~~~~~~~~~~I~~~l~~~g~~ 108 (294)
T 3nme_A 29 PEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGV 108 (294)
T ss_dssp THHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHHHHHHHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhCCCE
Confidence 34555565666 568999987764321 011 2356665321100000 0011112222222 23678
Q ss_pred EEEEcCCCh-hHHHH-HHHH-HHccC
Q 029984 140 IIVGCQSGK-RSMMA-ATDL-LNAGF 162 (184)
Q Consensus 140 ivv~c~~g~-rs~~~-~~~L-~~~G~ 162 (184)
|+|+|..|. ||..+ +..| ...|+
T Consensus 109 VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 109 TYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred EEEECCCCCchhHHHHHHHHHHHhCC
Confidence 999999886 76643 3333 33465
No 100
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=72.31 E-value=15 Score=27.89 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=23.4
Q ss_pred CeEEEEcCCCh---hHHHHHHHHHHccCCCeee
Q 029984 138 DEIIVGCQSGK---RSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 138 ~~ivv~c~~g~---rs~~~~~~L~~~G~~~v~~ 167 (184)
++|+|+|..|+ .+-.+++.|...||+ |.+
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v 90 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVV 90 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEE
Confidence 58999998765 566788999999995 654
No 101
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=71.88 E-value=5.4 Score=28.09 Aligned_cols=36 Identities=14% Similarity=0.408 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
+..+++|+|++-..+...+..|...|+. +..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQ-VSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 3568999999988888999999999984 77788874
No 102
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=70.47 E-value=6.7 Score=27.65 Aligned_cols=45 Identities=16% Similarity=0.285 Sum_probs=33.8
Q ss_pred HHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+..++... +..+++|+|++-..+..++..|...|+. +..+.|++.
T Consensus 22 L~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 22 LFDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp HHHHHHHS-CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHHhC-CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCC
Confidence 33444444 3457999999988899999999999985 777888753
No 103
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=69.94 E-value=4.6 Score=28.79 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=19.5
Q ss_pred CCCCeEEEEcCCC-hhHHHHH--HHHHHccCC
Q 029984 135 RKHDEIIVGCQSG-KRSMMAA--TDLLNAGFA 163 (184)
Q Consensus 135 ~~~~~ivv~c~~g-~rs~~~~--~~L~~~G~~ 163 (184)
..+.+|+|+|..| .||..++ ..+...|++
T Consensus 85 ~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred hcCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 3578999999988 5877643 344445653
No 104
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=69.28 E-value=25 Score=24.29 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=44.1
Q ss_pred cCHHHHHHHHhCC-CeEEEcCChhhHh----------cCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCC--CCCeEE
Q 029984 75 VPVRVAHELLQAG-HRYLDVRTPEEFS----------AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR--KHDEII 141 (184)
Q Consensus 75 i~~~~~~~~~~~~-~~liDvR~~~e~~----------~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~--~~~~iv 141 (184)
+....+..+...| -++|+.|+..+-. ...+ ..+++|.+. ....++.++...+.+. .+++|+
T Consensus 28 p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~-~~~~i~~Dv-----~~~~~~~v~~~~~~i~~~~G~dVL 101 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGM-DYVYIPVDW-----QNPKVEDVEAFFAAMDQHKGKDVL 101 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTC-EEEECCCCT-----TSCCHHHHHHHHHHHHHTTTSCEE
T ss_pred CCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCC-eEEEecCCC-----CCCCHHHHHHHHHHHHhcCCCCEE
Confidence 4456777777777 5678888654421 1111 245666531 1111244544443321 133899
Q ss_pred EEcCCChhHHHHH-HHHHHccCC
Q 029984 142 VGCQSGKRSMMAA-TDLLNAGFA 163 (184)
Q Consensus 142 v~c~~g~rs~~~~-~~L~~~G~~ 163 (184)
|+|.++.+...++ -.+...|.+
T Consensus 102 VnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 102 VHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp EECSBSHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHHHcCCC
Confidence 9999887654433 333456653
No 105
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=69.20 E-value=7.3 Score=27.07 Aligned_cols=46 Identities=13% Similarity=0.295 Sum_probs=34.0
Q ss_pred HHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.+..++... +..+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 20 ~l~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 20 CLTDLYDSI-SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp HHHHHHHHT-TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 344444444 3457899999988888999999999984 777888743
No 106
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=67.55 E-value=5 Score=27.94 Aligned_cols=36 Identities=22% Similarity=0.439 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
..+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 35 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 70 (163)
T 2hjv_A 35 PDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGMI 70 (163)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 457899999988899999999999985 777888753
No 107
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=65.85 E-value=7.5 Score=29.86 Aligned_cols=29 Identities=10% Similarity=0.177 Sum_probs=23.1
Q ss_pred CeEEEEcCCCh---hHHHHHHHHHHccCCCeee
Q 029984 138 DEIIVGCQSGK---RSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 138 ~~ivv~c~~g~---rs~~~~~~L~~~G~~~v~~ 167 (184)
++|+|+|..|+ .+-.+++.|...||+ |.+
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v 117 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VIL 117 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEE
Confidence 47999998765 566788999999996 554
No 108
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=65.09 E-value=9.9 Score=30.27 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=36.8
Q ss_pred HHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.+........++.+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 265 ~l~~~l~~~~~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (417)
T 2i4i_A 265 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 311 (417)
T ss_dssp HHHHHHHTCCTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHCCCC-eeEecCCCC
Confidence 34455555566778999999988888999999999984 777888753
No 109
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=63.92 E-value=14 Score=25.06 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHHH
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAWR 176 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W~ 176 (184)
+++-+|+|+.++..........|...||..+..-..|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 455568888776655557778889999976766677877764
No 110
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=63.58 E-value=8.5 Score=30.36 Aligned_cols=29 Identities=10% Similarity=0.177 Sum_probs=23.1
Q ss_pred CeEEEEcCCCh---hHHHHHHHHHHccCCCeee
Q 029984 138 DEIIVGCQSGK---RSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 138 ~~ivv~c~~g~---rs~~~~~~L~~~G~~~v~~ 167 (184)
++|+|+|..|+ .+-.+++.|...||+ |.+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V 164 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VIL 164 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEE
Confidence 57999998755 566788999999995 554
No 111
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=63.57 E-value=19 Score=27.70 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=53.6
Q ss_pred cCHHHHHHHHh----CC-CeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChh
Q 029984 75 VPVRVAHELLQ----AG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 149 (184)
Q Consensus 75 i~~~~~~~~~~----~~-~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~r 149 (184)
++.+++.++.+ -+ -++|.|.+.+|.+...=-|+--|=.+......+..+.+....+...++++. ++++.+|..
T Consensus 137 L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~--~~VsESGI~ 214 (258)
T 4a29_A 137 LTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNV--VKVAKLGIS 214 (258)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTS--EEEEEESSC
T ss_pred cCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCC--EEEEcCCCC
Confidence 45566666543 23 578999998887632112332221111111223344566667777777664 556789999
Q ss_pred HHHHHHHHHHccCCC
Q 029984 150 SMMAATDLLNAGFAG 164 (184)
Q Consensus 150 s~~~~~~L~~~G~~~ 164 (184)
+..-+..|...|++.
T Consensus 215 t~~dv~~l~~~G~~a 229 (258)
T 4a29_A 215 ERNEIEELRKLGVNA 229 (258)
T ss_dssp CHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHCCCCE
Confidence 888899999999963
No 112
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=62.85 E-value=8.9 Score=29.64 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=23.2
Q ss_pred CeEEEEcCCCh---hHHHHHHHHHHccCCCeee
Q 029984 138 DEIIVGCQSGK---RSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 138 ~~ivv~c~~g~---rs~~~~~~L~~~G~~~v~~ 167 (184)
++|+|+|..|+ .+-.+++.|...||+ |.+
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V 111 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTI 111 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEE
Confidence 58999998655 566788999999995 654
No 113
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=62.41 E-value=33 Score=23.15 Aligned_cols=86 Identities=19% Similarity=0.262 Sum_probs=42.2
Q ss_pred CcccCHHH-HHHHHhCC-CeEEEcCChh----hHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcC------CCCCe
Q 029984 72 PTSVPVRV-AHELLQAG-HRYLDVRTPE----EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------RKHDE 139 (184)
Q Consensus 72 ~~~i~~~~-~~~~~~~~-~~liDvR~~~----e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l------~~~~~ 139 (184)
+...+.++ +..+.+.+ ..||++++.. .+...++ .-+++|..+ +.....+.+......+ .++.+
T Consensus 24 p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~-~~~~~p~~d----~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (159)
T 1rxd_A 24 PTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDD----GAPPSNQIVDDWLSLVKIKFREEPGCC 98 (159)
T ss_dssp CCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC-EEEECCC------CCCCCHHHHHHHHHHHHHHHHHSTTCE
T ss_pred CccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCC-EEEeCCCcC----CCCCCHHHHHHHHHHHHHHHHhCCCCe
Confidence 34455666 44444556 5678988643 2222222 224555321 1112223232222221 34689
Q ss_pred EEEEcCCCh-hHHHHH-HHHHHccC
Q 029984 140 IIVGCQSGK-RSMMAA-TDLLNAGF 162 (184)
Q Consensus 140 ivv~c~~g~-rs~~~~-~~L~~~G~ 162 (184)
|+|+|..|. |+..++ ..|...|+
T Consensus 99 vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 99 IAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp EEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhCC
Confidence 999999874 766533 44445565
No 114
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=57.82 E-value=14 Score=31.73 Aligned_cols=37 Identities=24% Similarity=0.235 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
++.++||||++-..+..++..|...|+. +..|.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~~-~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGIH-AGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 5678999999988899999999999984 778888863
No 115
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=57.79 E-value=42 Score=25.19 Aligned_cols=84 Identities=13% Similarity=0.118 Sum_probs=41.7
Q ss_pred cCHHHHHHHHh---CC-CeEEEcCCh------hhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhc----CC--CCC
Q 029984 75 VPVRVAHELLQ---AG-HRYLDVRTP------EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR----FR--KHD 138 (184)
Q Consensus 75 i~~~~~~~~~~---~~-~~liDvR~~------~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~----l~--~~~ 138 (184)
.+++++.+.++ .+ ..|||++.. .+|...+|. -+++|..+. +.....+.+...... +. ++.
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi~-y~~~p~~D~---~~~P~~~~l~~~~~~i~~~~~~~~~~ 142 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIK-YIKLQCKGH---GECPTTENTETFIRLCERFNERNPPE 142 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTCE-EEECCCCCT---TCCCCHHHHHHHHHHHTTC-----CE
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCCE-EEEEecCCC---CCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 44666655443 23 679999864 334333331 245554211 122333444433332 22 347
Q ss_pred eEEEEcCCCh-hHHHH-HHHHHH-ccC
Q 029984 139 EIIVGCQSGK-RSMMA-ATDLLN-AGF 162 (184)
Q Consensus 139 ~ivv~c~~g~-rs~~~-~~~L~~-~G~ 162 (184)
+|+|+|..|. |+..+ +..|.. .|+
T Consensus 143 ~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 143 LIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 8999999875 66543 333433 565
No 116
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=56.82 E-value=7.7 Score=30.81 Aligned_cols=22 Identities=9% Similarity=0.119 Sum_probs=16.1
Q ss_pred hcCCCCCeEEEEcCCCh-hHHHH
Q 029984 132 TRFRKHDEIIVGCQSGK-RSMMA 153 (184)
Q Consensus 132 ~~l~~~~~ivv~c~~g~-rs~~~ 153 (184)
..++++.+|+|+|..|. |+..+
T Consensus 208 ~~l~~~~~i~vHC~aG~GRTgt~ 230 (314)
T 3mmj_A 208 RTLPQDAWLHFHSEAGVGRTTAF 230 (314)
T ss_dssp HTCCTTCEEEEECSSSSHHHHHH
T ss_pred HHcCCCCCEEEECCCCCchHHHH
Confidence 34677889999999776 65543
No 117
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=55.74 E-value=12 Score=26.83 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
..+++|+|++-..+...+..|...|+. +..+.|++
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~ 88 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGK 88 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 346999999988888999999999985 77788874
No 118
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=53.99 E-value=11 Score=27.63 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
..+++|||++-..+...+..|...|+. +..+.|++.
T Consensus 31 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~~ 66 (212)
T 3eaq_A 31 PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDLS 66 (212)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSSC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 557999999988888899999999985 777888743
No 119
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=53.48 E-value=11 Score=25.64 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=25.5
Q ss_pred eEEEEcCCCh-hHHHHHHHHHHccCCCeeeccccHH
Q 029984 139 EIIVGCQSGK-RSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 139 ~ivv~c~~g~-rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.|+|+|.+.. ||..+-..|+...-+++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 6899998544 8988888888875455666666654
No 120
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=52.63 E-value=21 Score=30.14 Aligned_cols=46 Identities=17% Similarity=0.335 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCCh---hHHHHHHHHHHccCCCeeec-ccc---------HHHHHhCCCCC
Q 029984 136 KHDEIIVGCQSGK---RSMMAATDLLNAGFAGITDI-AGG---------FAAWRQNGLPT 182 (184)
Q Consensus 136 ~~~~ivv~c~~g~---rs~~~~~~L~~~G~~~v~~l-~GG---------~~~W~~~g~p~ 182 (184)
+.++|+|+|..|+ ....+++.|...||+ |.++ .+. ++.|++.|.++
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~g~~~ 109 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VLVVFLGKKKTPDCEYNYGLYKKFGGKV 109 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EEEEECCSSCCHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEECCCCCHHHHHHHHHHHhCCCce
Confidence 4678999998765 566788999999995 5432 221 45677766553
No 121
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=52.48 E-value=3.1 Score=30.40 Aligned_cols=39 Identities=26% Similarity=0.309 Sum_probs=27.0
Q ss_pred CCeEEEEcCCCh-hHHHHHHHHHHc----cCCCeeeccccHHHHH
Q 029984 137 HDEIIVGCQSGK-RSMMAATDLLNA----GFAGITDIAGGFAAWR 176 (184)
Q Consensus 137 ~~~ivv~c~~g~-rs~~~~~~L~~~----G~~~v~~l~GG~~~W~ 176 (184)
...|+|+|.+.. ||..+-..|+.. |. ++.+...|..+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 357999998544 898877666654 32 5777777877664
No 122
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=51.61 E-value=13 Score=29.69 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=43.3
Q ss_pred CHHHHHHHHh----CCCeEEEcCChhhHhcCCCCC-cEEeccccccCCCCCCCHHHHHHHHh----cC--CCCCeEEEEc
Q 029984 76 PVRVAHELLQ----AGHRYLDVRTPEEFSAGHATG-AINVPYMYRVGSGMTKNLKFVEEVST----RF--RKHDEIIVGC 144 (184)
Q Consensus 76 ~~~~~~~~~~----~~~~liDvR~~~e~~~ghIpg-Ai~ip~~~~~~~~~~~~~~~~~~~~~----~l--~~~~~ivv~c 144 (184)
..+++...++ +.+.|++++++..|....+.+ -.++|+.+.. ....+.+..... .+ +++.+++|+|
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~~----~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC 126 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHN----VPTLVDLLKFIDDAKVWMTSDPDHVIAIHS 126 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTTS----CCCHHHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCCC----CCCHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 3455555554 347899998665565433322 3456654221 122222222222 12 3457999999
Q ss_pred CCCh-hHHH-HHHHHHHccC
Q 029984 145 QSGK-RSMM-AATDLLNAGF 162 (184)
Q Consensus 145 ~~g~-rs~~-~~~~L~~~G~ 162 (184)
..|. |+.. ++..|...|.
T Consensus 127 ~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 127 KGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp SSSSHHHHHHHHHHHHHTTS
T ss_pred CCCCcchHHHHHHHHHHhcC
Confidence 8664 6543 4455555543
No 123
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=51.39 E-value=21 Score=25.41 Aligned_cols=46 Identities=20% Similarity=0.255 Sum_probs=33.8
Q ss_pred HHHHhcCCCCCeEEEEcCCCh--hHHHHHHHHHH---ccCCCeeeccccHH
Q 029984 128 EEVSTRFRKHDEIIVGCQSGK--RSMMAATDLLN---AGFAGITDIAGGFA 173 (184)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~--rs~~~~~~L~~---~G~~~v~~l~GG~~ 173 (184)
+.++..++++..+|+.+-.|. .|...+..|.. .|..++..+-||-.
T Consensus 65 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 65 QRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 445666788877888877664 58888888876 57777888888844
No 124
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=47.79 E-value=25 Score=25.02 Aligned_cols=48 Identities=19% Similarity=0.239 Sum_probs=34.3
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCeee---c---cccHHHHHhCCCCC
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---I---AGGFAAWRQNGLPT 182 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~---l---~GG~~~W~~~g~p~ 182 (184)
.++++|+++++ +|.....++..|++.|.+.|.+ + .+|.+.....|.|+
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~ 168 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEY 168 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeE
Confidence 45778888875 6888888899999999876542 2 25555555567765
No 125
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=47.73 E-value=19 Score=24.56 Aligned_cols=36 Identities=19% Similarity=0.012 Sum_probs=24.9
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+.|+|+|.+. .||..+-..|+...-.++.+...|..
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~ 40 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIE 40 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESS
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCC
Confidence 3699999754 49988888888764345666665543
No 126
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=45.73 E-value=25 Score=24.50 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=25.4
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
..|+|+|.+. .||..+...|+...-+++.+...|.
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt 56 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT 56 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence 4699999854 4999888888887545566655554
No 127
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=45.44 E-value=46 Score=21.71 Aligned_cols=93 Identities=17% Similarity=0.198 Sum_probs=49.1
Q ss_pred CCcccCHHHHHHHHhCCCeEE-EcCChhhHh-cCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCCh
Q 029984 71 VPTSVPVRVAHELLQAGHRYL-DVRTPEEFS-AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~~~~li-DvR~~~e~~-~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (184)
.+.-++.+.++.+.+-++++. |.+...++. .-.+++..-+.+. +....+..+.+.+.+..++.|++.++.|.
T Consensus 17 d~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~V~~l~d~Gd 90 (117)
T 3hh1_A 17 NLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYH------SFNEERAVRQVIELLEEGSDVALVTDAGT 90 (117)
T ss_dssp CGGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECC------STTHHHHHHHHHHHHHTTCCEEEEEETTS
T ss_pred CHHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccC------CccHHHHHHHHHHHHHCCCeEEEEecCCc
Confidence 344577777766666776665 444433443 2235544333221 11122344445555555667877773221
Q ss_pred -----hHHHHHHHHHHccCCCeeeccc
Q 029984 149 -----RSMMAATDLLNAGFAGITDIAG 170 (184)
Q Consensus 149 -----rs~~~~~~L~~~G~~~v~~l~G 170 (184)
........+.+.|++ +.++.|
T Consensus 91 P~i~~~~~~l~~~~~~~gi~-v~viPG 116 (117)
T 3hh1_A 91 PAISDPGYTMASAAHAAGLP-VVPVPG 116 (117)
T ss_dssp CGGGSTTHHHHHHHHHTTCC-EEEEC-
T ss_pred CeEeccHHHHHHHHHHCCCc-EEEeCC
Confidence 334566777788885 776665
No 128
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=45.25 E-value=35 Score=26.31 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=50.4
Q ss_pred cCHHHHHHHHh----CC-CeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChh
Q 029984 75 VPVRVAHELLQ----AG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 149 (184)
Q Consensus 75 i~~~~~~~~~~----~~-~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~r 149 (184)
++.+++.++.. -+ .++++|.+.+|.....--|+--|=.+......+..+.+....+...++++. ++++.+|..
T Consensus 153 L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~--~vIaesGI~ 230 (272)
T 3tsm_A 153 VDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDR--LLVGESGIF 230 (272)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTS--EEEEESSCC
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCC--cEEEECCCC
Confidence 34555555542 24 568899998887632222321111100011112223455666667777654 455789998
Q ss_pred HHHHHHHHHHccCCC
Q 029984 150 SMMAATDLLNAGFAG 164 (184)
Q Consensus 150 s~~~~~~L~~~G~~~ 164 (184)
+..-+..+.+.|++-
T Consensus 231 t~edv~~l~~~Ga~g 245 (272)
T 3tsm_A 231 THEDCLRLEKSGIGT 245 (272)
T ss_dssp SHHHHHHHHTTTCCE
T ss_pred CHHHHHHHHHcCCCE
Confidence 888889999999864
No 129
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=45.20 E-value=11 Score=26.62 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=26.4
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHH----ccCCCeeeccccHHHH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLN----AGFAGITDIAGGFAAW 175 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~----~G~~~v~~l~GG~~~W 175 (184)
..|+|+|.+. .||..+-..|+. .|..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 4699999754 488877766554 4655577777777766
No 130
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=45.06 E-value=25 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.012 Sum_probs=25.2
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+.|+|+|.+. .||..+-..|+...-.++.+...|..
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 40 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIE 40 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESS
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCC
Confidence 3689999754 49988888888764345666666654
No 131
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=44.96 E-value=31 Score=26.94 Aligned_cols=44 Identities=16% Similarity=0.289 Sum_probs=33.3
Q ss_pred HHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
+....... +..+++|+|++-..+...+..|.+.|+. +..+.|++
T Consensus 241 l~~~l~~~-~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 284 (391)
T 1xti_A 241 LFDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGM 284 (391)
T ss_dssp HHHHHHHS-CCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTS
T ss_pred HHHHHHhc-CCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 33334433 4568999999988888999999999985 77788874
No 132
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=44.77 E-value=25 Score=27.64 Aligned_cols=71 Identities=13% Similarity=0.316 Sum_probs=34.7
Q ss_pred CCeEEEcCChhhHhcCCCC-CcEEeccccccCCCCCCCHHHHH----HHHhcC--CCCCeEEEEcCCCh-hHHH-HHHHH
Q 029984 87 GHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVE----EVSTRF--RKHDEIIVGCQSGK-RSMM-AATDL 157 (184)
Q Consensus 87 ~~~liDvR~~~e~~~ghIp-gAi~ip~~~~~~~~~~~~~~~~~----~~~~~l--~~~~~ivv~c~~g~-rs~~-~~~~L 157 (184)
.+.++++.++..|...... .-.++|+.+... ...+.+. .....+ +++.+|+|+|..|. |+.. ++..|
T Consensus 58 ~~~v~nl~~e~~y~~~~~~~~~~~~~~~D~~~----P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTGt~ia~yL 133 (324)
T 1d5r_A 58 HYKIYNLCAERHYDTAKFNCRVAQYPFEDHNP----PQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYL 133 (324)
T ss_dssp CEEEEEEESSCCCCTTSCSSCEEEEEECTTSC----CCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHH
T ss_pred cEEEEEcCCCCCCChHHhCCeEEEEeecCCCC----CcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhHHHHHHHH
Confidence 3678888654344433332 234666532211 1222222 222222 34679999999775 6654 33344
Q ss_pred HHcc
Q 029984 158 LNAG 161 (184)
Q Consensus 158 ~~~G 161 (184)
...+
T Consensus 134 ~~~~ 137 (324)
T 1d5r_A 134 LHRG 137 (324)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 4333
No 133
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=44.74 E-value=26 Score=25.06 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=34.8
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCeee---cc----ccHHHHHhCCCCC
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 182 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~p~ 182 (184)
.+++.|+++++ +|.....++..|++.|.+.|.. ++ +|.....+.|.|+
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~v 181 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITS 181 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCcE
Confidence 46788999876 7888888999999999876532 22 4666666667664
No 134
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=43.65 E-value=59 Score=21.03 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=17.9
Q ss_pred CeEEEEcCCChhHH-HHH----HHHHHccCC
Q 029984 138 DEIIVGCQSGKRSM-MAA----TDLLNAGFA 163 (184)
Q Consensus 138 ~~ivv~c~~g~rs~-~~~----~~L~~~G~~ 163 (184)
++|+++|.+|.-+. .+. ..+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 56999999997543 333 455667875
No 135
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=43.63 E-value=20 Score=27.93 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=32.9
Q ss_pred HHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
+........ ..+++|+|++-..+...+..|...|+. +..+.|++
T Consensus 19 L~~ll~~~~-~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l 62 (300)
T 3i32_A 19 LSDLLYVAS-PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDM 62 (300)
T ss_dssp HHHHHHHHC-CSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCC
T ss_pred HHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 444443333 567999999988888899999999985 77788873
No 136
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=42.94 E-value=3.5 Score=28.71 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=26.2
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHHHH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAAW 175 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~~W 175 (184)
..|+|+|.+. .||..+-..|+...-+++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 4689999754 3888888777776544455666676665
No 137
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=42.28 E-value=36 Score=24.74 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=34.5
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCeee-----c-cccHHHHHhCCCCC
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD-----I-AGGFAAWRQNGLPT 182 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~-----l-~GG~~~W~~~g~p~ 182 (184)
.+++.|+++++ +|.....++..|++.|.+.+.+ . .+|.......|.|+
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v 165 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRL 165 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeE
Confidence 35778888875 6888888899999999876542 1 25566666667664
No 138
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=42.18 E-value=34 Score=24.41 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=32.7
Q ss_pred HHHHHHhcCCCCCeEEEEcCCCh--hHHHHHHHHHH---ccCCCeeeccccHH
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGK--RSMMAATDLLN---AGFAGITDIAGGFA 173 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~--rs~~~~~~L~~---~G~~~v~~l~GG~~ 173 (184)
+-+.++..++++..+|+.|-.|. .|...+..|.. .|..++..+-||-.
T Consensus 59 E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~ 111 (167)
T 1to0_A 59 EGDRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSL 111 (167)
T ss_dssp HHHHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSS
T ss_pred HHHHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCC
Confidence 34445566666655777776664 68888888876 57667877778853
No 139
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=42.15 E-value=36 Score=25.59 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=35.3
Q ss_pred CCCCCeEEEEcC---CChhHHHHHHHHHHccCCCeee---c----cccHHHHHhCCCCC
Q 029984 134 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---I----AGGFAAWRQNGLPT 182 (184)
Q Consensus 134 l~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~---l----~GG~~~W~~~g~p~ 182 (184)
+.++++|+|+.+ +|.....++..|++.|.+.+.+ + .+|.+.....|.|+
T Consensus 134 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v 192 (234)
T 3m3h_A 134 AEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVAS 192 (234)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCE
T ss_pred cCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCE
Confidence 346788888875 7888888999999999864332 2 35566667778775
No 140
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=42.00 E-value=23 Score=23.24 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=20.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHH----HccCC
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLL----NAGFA 163 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~----~~G~~ 163 (184)
.+..+|++.|..|..+...+..++ +.|++
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~ 36 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR 36 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc
Confidence 345679999999987766665554 45764
No 141
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=41.55 E-value=59 Score=26.18 Aligned_cols=72 Identities=10% Similarity=0.194 Sum_probs=39.0
Q ss_pred CCCeEEEcCChhhHhcCCCCCc-EEeccccccCCCCCCCHHHHHHHHh----cC--CCCCeEEEEcCCCh-hHHH-HHHH
Q 029984 86 AGHRYLDVRTPEEFSAGHATGA-INVPYMYRVGSGMTKNLKFVEEVST----RF--RKHDEIIVGCQSGK-RSMM-AATD 156 (184)
Q Consensus 86 ~~~~liDvR~~~e~~~ghIpgA-i~ip~~~~~~~~~~~~~~~~~~~~~----~l--~~~~~ivv~c~~g~-rs~~-~~~~ 156 (184)
+.+.|+++++ ..|......+. .++|+.+.. ....+.+..... .+ +++.+++|+|..|. |+.. ++..
T Consensus 62 ~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD~~----~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~ 136 (361)
T 3n0a_A 62 DHYTVYNLSP-KSYRTAKFHSRVSECSWPIRQ----APSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAM 136 (361)
T ss_dssp TCEEEEECSS-SCCGGGSCGGGEEECCCCSSS----CCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHH
T ss_pred CeEEEEECCC-CCCChhhcCCcEEEeecCCCC----CCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHH
Confidence 3588999965 56765555443 356653221 122232222221 11 45678999998664 6543 4455
Q ss_pred HHHccC
Q 029984 157 LLNAGF 162 (184)
Q Consensus 157 L~~~G~ 162 (184)
|...|.
T Consensus 137 Li~~~~ 142 (361)
T 3n0a_A 137 FIFCNL 142 (361)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 555554
No 142
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=41.37 E-value=17 Score=25.20 Aligned_cols=36 Identities=25% Similarity=0.217 Sum_probs=25.4
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHHH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAA 174 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~~ 174 (184)
+.|+|+|.+. .||..+-..|+... .++.+...|..+
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 45 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 45 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTC
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccC
Confidence 3699999754 49988888888764 246666666643
No 143
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=41.17 E-value=21 Score=30.00 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
++.+++|||++-..+...+..|.+.|+. +..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~-~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGIS-AAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 4567999999988899999999999984 778888864
No 144
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=39.78 E-value=39 Score=29.37 Aligned_cols=44 Identities=16% Similarity=0.261 Sum_probs=34.1
Q ss_pred HHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 128 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
..+...+..+.+++|+|++-.++...+..|.+.|+. +..+.|++
T Consensus 436 ~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 479 (661)
T 2d7d_A 436 GEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIK-VNYLHSEI 479 (661)
T ss_dssp HHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCCC-eEEEeCCC
Confidence 333334456778999999988999999999999984 77777774
No 145
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=45.92 E-value=6.1 Score=27.69 Aligned_cols=36 Identities=22% Similarity=0.144 Sum_probs=29.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+.+++|+|++-..+...+..|...|+. +..+.|++.
T Consensus 30 ~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~ 65 (170)
T 2yjt_D 30 ATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMV 65 (170)
Confidence 457899999888888899999988884 667778765
No 146
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=39.16 E-value=40 Score=26.78 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=29.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccc
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAG 170 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~G 170 (184)
.++.+++|+|++-..+......|.+.|+. +..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIK-AKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCC-cEEEec
Confidence 45678999999988888899999999985 777888
No 147
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=39.12 E-value=26 Score=30.59 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=31.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 134 FRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 134 l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
+.++.+++|+|++-.++...+..|.+.|+. +..+.|++
T Consensus 436 ~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 473 (664)
T 1c4o_A 436 AARGERTLVTVLTVRMAEELTSFLVEHGIR-ARYLHHEL 473 (664)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HhcCCEEEEEECCHHHHHHHHHHHHhcCCC-ceeecCCC
Confidence 345678999999988999999999999984 77777774
No 148
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=38.60 E-value=47 Score=24.36 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=25.0
Q ss_pred CCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 137 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 137 ~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
++.++++++ +|.....+...|++.|.++|+.
T Consensus 124 ~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~ 157 (209)
T 1i5e_A 124 ERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKF 157 (209)
T ss_dssp TSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 567888875 6888888889999999887764
No 149
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=38.13 E-value=34 Score=25.92 Aligned_cols=49 Identities=10% Similarity=0.121 Sum_probs=34.5
Q ss_pred CCCCCeEEEEcC---CChhHHHHHHHHHHccCCCeee---c----cccHHHHHhCCCCC
Q 029984 134 FRKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---I----AGGFAAWRQNGLPT 182 (184)
Q Consensus 134 l~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~---l----~GG~~~W~~~g~p~ 182 (184)
+.++++|+|+.+ +|.....++..|++.|.+.+.+ + .+|.+...+.|.++
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~ 204 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKL 204 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCE
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCE
Confidence 346788888875 7888888999999999864432 2 24566666667664
No 150
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=37.76 E-value=20 Score=25.45 Aligned_cols=35 Identities=23% Similarity=0.178 Sum_probs=25.7
Q ss_pred eEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHHH
Q 029984 139 EIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAA 174 (184)
Q Consensus 139 ~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~~ 174 (184)
.|+|+|.+. .||..+-..|+... .++.+...|..+
T Consensus 28 ~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 28 SILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred EEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 799999854 49998888888765 346666777643
No 151
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=37.69 E-value=9.1 Score=27.00 Aligned_cols=39 Identities=15% Similarity=-0.001 Sum_probs=26.3
Q ss_pred CCeEEEEcCCC-hhHHHHHHHHHH----ccCC-C-eeeccccHHHH
Q 029984 137 HDEIIVGCQSG-KRSMMAATDLLN----AGFA-G-ITDIAGGFAAW 175 (184)
Q Consensus 137 ~~~ivv~c~~g-~rs~~~~~~L~~----~G~~-~-v~~l~GG~~~W 175 (184)
...|+|+|.+. .||..+-..|+. .|.. + +.+...|...|
T Consensus 7 ~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 7 KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 34699999754 488877766654 3553 3 66777777766
No 152
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=37.26 E-value=27 Score=23.84 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=25.4
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|.+.|..
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~ 116 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKI 116 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEE
Confidence 4678888875 6888888899999999876643
No 153
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.22 E-value=40 Score=22.46 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=20.7
Q ss_pred EEEcCCChhHHHHHHHHHHccCCCeeecccc
Q 029984 141 IVGCQSGKRSMMAATDLLNAGFAGITDIAGG 171 (184)
Q Consensus 141 vv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG 171 (184)
|++|..|.....++..|.+.|++ |.+++-.
T Consensus 10 viIiG~G~~G~~la~~L~~~g~~-v~vid~~ 39 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDIP-LVVIETS 39 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEECC
Confidence 44456677777888888888874 6666544
No 154
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=36.88 E-value=1.1e+02 Score=23.65 Aligned_cols=106 Identities=10% Similarity=0.176 Sum_probs=60.7
Q ss_pred CCcccCHHHHHHHHhCCCeEE-EcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCCh-
Q 029984 71 VPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK- 148 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~~~~li-DvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~- 148 (184)
.+.-++...+..+..-++++. |.|...+...-.-++..-+++. .....+....+...+..++.|++.++.|.
T Consensus 27 ~~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~~~i~~~------~~~~~~~~~~li~~l~~G~~Va~lsdaGdP 100 (296)
T 3kwp_A 27 NLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITTKQISFH------EHNTQERIPQLIAKLKQGMQIAQVSDAGMP 100 (296)
T ss_dssp CGGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCCEEEECS------TTTHHHHHHHHHHHHHTTCEEEEECSSBCT
T ss_pred CccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeeeeeeehh------hcchhhHhHHHHHHHhcCceEEEeccCCCC
Confidence 345678888877777787777 6665444332111233333331 11113445555555556778888874432
Q ss_pred ----hHHHHHHHHHHccCCCeeecccc---HHHHHhCCCCCC
Q 029984 149 ----RSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPTE 183 (184)
Q Consensus 149 ----rs~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~~ 183 (184)
........+.+.|++ |.++.|= ..+....|+|.+
T Consensus 101 ~i~~~g~~lv~~~~~~gi~-v~viPGiSA~~aA~a~~Glp~~ 141 (296)
T 3kwp_A 101 SISDPGHELVNACIDAHIP-VVPLPGANAGLTALIASGLAPQ 141 (296)
T ss_dssp TSSHHHHHHHHHHHHTTCC-EEECCCCCHHHHHHHHHSSCCS
T ss_pred CCCCCchHHHHHHHHcCCC-eeeCCCcccchHHHHhccCCCC
Confidence 445667788888985 7777654 345555666653
No 155
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=36.65 E-value=36 Score=26.13 Aligned_cols=20 Identities=25% Similarity=0.296 Sum_probs=14.5
Q ss_pred CCCCCeEEEEcCCCh-hHHHH
Q 029984 134 FRKHDEIIVGCQSGK-RSMMA 153 (184)
Q Consensus 134 l~~~~~ivv~c~~g~-rs~~~ 153 (184)
++.+.||||+|..|. |+...
T Consensus 201 ~~~~~pivVHCsaGvGRTGtf 221 (284)
T 1fpr_A 201 LPHAGPIIVHSSAGIGRTGTI 221 (284)
T ss_dssp STTCCCEEEESSBSSHHHHHH
T ss_pred cCCCCcEEEEcCCCCcHHHHH
Confidence 346789999998665 76543
No 156
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=36.26 E-value=23 Score=25.13 Aligned_cols=36 Identities=25% Similarity=0.271 Sum_probs=25.6
Q ss_pred CeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHHH
Q 029984 138 DEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFAA 174 (184)
Q Consensus 138 ~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~~ 174 (184)
+.|+|+|.+. .||..+-..|+... .++.+...|..+
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 59 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLGA 59 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETTC
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 3799999754 49988888888764 346666666643
No 157
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=35.93 E-value=36 Score=23.82 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=25.7
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|.+.|+.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEE
Confidence 4678888876 7888888999999999876653
No 158
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=35.92 E-value=38 Score=26.08 Aligned_cols=20 Identities=20% Similarity=0.483 Sum_probs=14.4
Q ss_pred CCCCeEEEEcCCCh-hHHHHH
Q 029984 135 RKHDEIIVGCQSGK-RSMMAA 154 (184)
Q Consensus 135 ~~~~~ivv~c~~g~-rs~~~~ 154 (184)
..+.||||+|..|. |+...+
T Consensus 207 ~~~~PivVHCsaGvGRTGtfi 227 (287)
T 2b49_A 207 VDSEPVLVHCSAGIGRTGVLV 227 (287)
T ss_dssp CTTCCEEEECSSSSHHHHHHH
T ss_pred cCCCcEEEEcCCCCcHHHHHH
Confidence 44689999998765 766543
No 159
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=35.80 E-value=44 Score=23.60 Aligned_cols=47 Identities=15% Similarity=0.137 Sum_probs=33.3
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee---ecc---ccHHHHHhCCCCC
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT---DIA---GGFAAWRQNGLPT 182 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~---~l~---GG~~~W~~~g~p~ 182 (184)
+++.|+++++ +|.....++..|++.|.+.+. +++ +|.+...+.|.|+
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~ 160 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRL 160 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcE
Confidence 6788988875 788888899999999986443 233 4455555567654
No 160
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=35.79 E-value=29 Score=27.34 Aligned_cols=45 Identities=13% Similarity=0.299 Sum_probs=33.5
Q ss_pred HHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+....... +..+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 249 l~~~~~~~-~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 249 LNTLFSKL-QINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp HHHHHHHS-CCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred HHHHHhhc-CCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCCC
Confidence 33334433 3457999999988888999999999984 777888753
No 161
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=35.49 E-value=33 Score=26.39 Aligned_cols=38 Identities=24% Similarity=0.300 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
....+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 273 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDLS 273 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSSC
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCCC
Confidence 34567899999988898999999999984 777888743
No 162
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=35.27 E-value=48 Score=27.66 Aligned_cols=38 Identities=16% Similarity=0.164 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHc---cCCCeeeccccHH
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNA---GFAGITDIAGGFA 173 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~---G~~~v~~l~GG~~ 173 (184)
.++.+++|||++-..+..++..|.+. |+. +..+.|++.
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~~-v~~~h~~~~ 377 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLP-ILEFHGKIT 377 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTSC-EEEESTTSC
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCce-EEEecCCCC
Confidence 56778999999988888899999887 764 777888753
No 163
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=35.18 E-value=46 Score=25.52 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=14.2
Q ss_pred CCCCCeEEEEcCCCh-hHHH
Q 029984 134 FRKHDEIIVGCQSGK-RSMM 152 (184)
Q Consensus 134 l~~~~~ivv~c~~g~-rs~~ 152 (184)
.+...||||+|..|. |+..
T Consensus 203 ~~~~~PivVHCsaGvGRTGt 222 (288)
T 4grz_A 203 LPHAGPIIVHSSAGIGRTGT 222 (288)
T ss_dssp STTCCCEEEECSSSSHHHHH
T ss_pred cCCCCcEEEEeCCCCcHHHH
Confidence 456789999998765 6654
No 164
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=35.16 E-value=32 Score=26.79 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
++.+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGHE-VSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCCc-EEEeCCCCC
Confidence 4568999999988888999999999984 777888753
No 165
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=35.12 E-value=35 Score=26.60 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=22.2
Q ss_pred ChhHHHHHHHHHHccCCCeeeccccH
Q 029984 147 GKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 147 g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
|..-...+..|+++|..+..+||||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 45567899999999999999999983
No 166
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=34.85 E-value=37 Score=22.25 Aligned_cols=27 Identities=26% Similarity=0.336 Sum_probs=18.0
Q ss_pred CCeEEEEcCCChhH-HHHH----HHHHHccCC
Q 029984 137 HDEIIVGCQSGKRS-MMAA----TDLLNAGFA 163 (184)
Q Consensus 137 ~~~ivv~c~~g~rs-~~~~----~~L~~~G~~ 163 (184)
.++|++.|.+|.-+ ..++ ..+.+.|++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 35799999999753 3344 445567775
No 167
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=34.75 E-value=31 Score=27.10 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
...+++|+|++-..+...+..|.+.|+. +..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCe-EEEecCCC
Confidence 3457999999988899999999999984 77788884
No 168
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=34.21 E-value=1e+02 Score=20.61 Aligned_cols=45 Identities=13% Similarity=0.153 Sum_probs=25.7
Q ss_pred HHHHHHHhcCCCCCeEEEEcCC-ChhHHHHHHHHHHccCCCeeeccc
Q 029984 125 KFVEEVSTRFRKHDEIIVGCQS-GKRSMMAATDLLNAGFAGITDIAG 170 (184)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~-g~rs~~~~~~L~~~G~~~v~~l~G 170 (184)
+.+.+..+.++.++.++|.++- |..-...+..+... ..++.++.|
T Consensus 46 ~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~-~~~v~vi~G 91 (135)
T 1pdo_A 46 EKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVD-KEHYEVIAG 91 (135)
T ss_dssp HHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTT-CTTEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHhc-cCCEEEEeC
Confidence 3455556666666678888885 54433444444433 346776644
No 169
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=34.15 E-value=62 Score=27.07 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=30.9
Q ss_pred HhcCCCCCeEEEEcCCCh---hHHHHHHHHHHccCCCeeec-cc---------cHHHHHhCCCC
Q 029984 131 STRFRKHDEIIVGCQSGK---RSMMAATDLLNAGFAGITDI-AG---------GFAAWRQNGLP 181 (184)
Q Consensus 131 ~~~l~~~~~ivv~c~~g~---rs~~~~~~L~~~G~~~v~~l-~G---------G~~~W~~~g~p 181 (184)
.+.+++.++|+|+|..|+ ....+++.|.+. |+ |.++ .+ -++.|++.|.+
T Consensus 40 ~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~~-V~v~~~~~~~~~~a~~~~~~~~~~g~~ 101 (475)
T 3k5w_A 40 LQNASLGAKVIILCGSGDNGGDGYALARRLVGR-FR-VLVFEMKLTKSPMCQLQKERAKKAGVV 101 (475)
T ss_dssp HTTSCTTCEEEEEECSSHHHHHHHHHHHHHBTT-BE-EEEEESSCCCSHHHHHHHHHHHHTTCE
T ss_pred HHHcCCCCeEEEEECCCCCHHHHHHHHHHHHcC-Cc-eEEEEeCCCCCHHHHHHHHHHHHCCCc
Confidence 334566788999998765 455677888866 64 5442 22 24556666644
No 170
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=34.08 E-value=28 Score=30.36 Aligned_cols=21 Identities=19% Similarity=0.354 Sum_probs=15.4
Q ss_pred hcCCCCCeEEEEcCCCh-hHHH
Q 029984 132 TRFRKHDEIIVGCQSGK-RSMM 152 (184)
Q Consensus 132 ~~l~~~~~ivv~c~~g~-rs~~ 152 (184)
..++++..++|+|..|. |...
T Consensus 525 ~~lp~~~~v~vHC~aG~GRTtT 546 (629)
T 3f41_A 525 RTMPANAWLHFHCQAGAGRTTA 546 (629)
T ss_dssp HHSCTTCEEEEECSSSSHHHHH
T ss_pred HhcCCCCCEEEeCCCCCchHHH
Confidence 34678889999999765 5543
No 171
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=33.92 E-value=40 Score=23.75 Aligned_cols=32 Identities=13% Similarity=0.001 Sum_probs=25.8
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
.+++.|+++++ +|.....++..|++.|.+.|.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 152 (180)
T 1zn8_A 118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLE 152 (180)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEE
Confidence 35778888875 788888899999999987654
No 172
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=33.75 E-value=50 Score=25.99 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=27.6
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeeecc
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDIA 169 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~l~ 169 (184)
+++.++++++ +|.....++..|++.|.++|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 4678888876 688888999999999998876544
No 173
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=33.57 E-value=42 Score=22.53 Aligned_cols=27 Identities=33% Similarity=0.567 Sum_probs=18.1
Q ss_pred CCCeEEEEcCCChhHHHH-H----HHHHHccC
Q 029984 136 KHDEIIVGCQSGKRSMMA-A----TDLLNAGF 162 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~-~----~~L~~~G~ 162 (184)
+-..|+++|.+|.-+... + ..|.+.|+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 345799999999854433 3 44556787
No 174
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=33.43 E-value=39 Score=25.08 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=26.4
Q ss_pred CCCeEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccH
Q 029984 136 KHDEIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 136 ~~~~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
....|+|+|.+. .||..+...|+...-+++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 456899999854 4999888888876545566666554
No 175
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=32.42 E-value=36 Score=26.87 Aligned_cols=36 Identities=11% Similarity=0.370 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
..+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANFT-VSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCCc-eEEeeCCCC
Confidence 447899999988888999999999984 777888753
No 176
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=32.41 E-value=56 Score=20.88 Aligned_cols=28 Identities=11% Similarity=0.039 Sum_probs=22.3
Q ss_pred CCCeEEEEcCC------ChhHHHHHHHHHHccCC
Q 029984 136 KHDEIIVGCQS------GKRSMMAATDLLNAGFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~------g~rs~~~~~~L~~~G~~ 163 (184)
+..+|+||..+ +..+.++-..|.+.|++
T Consensus 16 ~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~ 49 (109)
T 3ipz_A 16 NSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP 49 (109)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred ccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC
Confidence 45578899874 66788899999999875
No 177
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=31.76 E-value=56 Score=25.89 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=14.0
Q ss_pred CCCCCeEEEEcCCCh-hHHH
Q 029984 134 FRKHDEIIVGCQSGK-RSMM 152 (184)
Q Consensus 134 l~~~~~ivv~c~~g~-rs~~ 152 (184)
.+.+.||||+|..|. |+..
T Consensus 234 ~~~~~PiVVHCSAGvGRTGt 253 (342)
T 3i36_A 234 IPPESPILVHCSAGVGRTGT 253 (342)
T ss_dssp SCSSCCEEEESSSSSHHHHH
T ss_pred CCCCCCEEEEcCCCChHHHH
Confidence 345789999998665 6654
No 178
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=31.74 E-value=40 Score=23.96 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.7
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|.+.|..
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 131 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 131 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 7888888899999999877653
No 179
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=31.28 E-value=59 Score=27.39 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHc---cCCCeeeccccH
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNA---GFAGITDIAGGF 172 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~---G~~~v~~l~GG~ 172 (184)
.++..++|||++-..+..++..|.+. |+. +..+.|++
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~~-v~~~hg~~ 325 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLP-ILEFHGKI 325 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTSC-EEEESTTS
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCCc-EEEecCCC
Confidence 45678999999988888899999887 764 77788884
No 180
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=31.11 E-value=50 Score=25.94 Aligned_cols=46 Identities=4% Similarity=0.164 Sum_probs=31.5
Q ss_pred HHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.+........ ..+++|+|++-..+...+..|.+.|+. +..+.|++.
T Consensus 270 ~l~~~~~~~~-~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~h~~~~ 315 (414)
T 3eiq_A 270 TLCDLYETLT-ITQAVIFINTRRKVDWLTEKMHARDFT-VSAMHGDMD 315 (414)
T ss_dssp HHHHHHHSSC-CSSCEEECSCHHHHHHHHHHHHTTTCC-CEEC---CH
T ss_pred HHHHHHHhCC-CCcEEEEeCCHHHHHHHHHHHHhcCCe-EEEecCCCC
Confidence 3444444443 446889999988888999999999984 777888854
No 181
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=31.09 E-value=67 Score=22.79 Aligned_cols=49 Identities=24% Similarity=0.213 Sum_probs=32.7
Q ss_pred HHHHHHhcCCCCCeEEEEcCCCh--hHHHHHHHHHH---ccCCCeeeccccHHHH
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGK--RSMMAATDLLN---AGFAGITDIAGGFAAW 175 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~--rs~~~~~~L~~---~G~~~v~~l~GG~~~W 175 (184)
+-+.+.+.++++..+|+.|-.|. .|...+..|.+ .| .++..+-||-.++
T Consensus 54 E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl 107 (163)
T 1o6d_A 54 ETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGL 107 (163)
T ss_dssp HHHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCC
T ss_pred HHHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCC
Confidence 34445666766655777776664 58888877765 47 6788888885543
No 182
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=30.70 E-value=43 Score=23.67 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=25.6
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|.+.|..
T Consensus 94 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~ 128 (183)
T 1hgx_A 94 EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKV 128 (183)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 7888888899999999876653
No 183
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=30.26 E-value=48 Score=23.67 Aligned_cols=48 Identities=15% Similarity=0.107 Sum_probs=33.4
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCeee---cc----ccHHHHHhCCCCC
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD---IA----GGFAAWRQNGLPT 182 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~---l~----GG~~~W~~~g~p~ 182 (184)
.+++.|+++++ +|.....++..|++.|...|+. ++ +|.....+.|.|+
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~ 175 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRV 175 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCE
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcE
Confidence 36788999876 7888888999999999876542 22 3445544556554
No 184
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=30.23 E-value=85 Score=19.82 Aligned_cols=8 Identities=25% Similarity=0.551 Sum_probs=3.1
Q ss_pred HHHHHccC
Q 029984 155 TDLLNAGF 162 (184)
Q Consensus 155 ~~L~~~G~ 162 (184)
..|.+.||
T Consensus 23 ~~L~~~g~ 30 (129)
T 3h1g_A 23 NTLSRLGY 30 (129)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 33333343
No 185
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=30.12 E-value=71 Score=22.71 Aligned_cols=32 Identities=6% Similarity=-0.013 Sum_probs=25.9
Q ss_pred cCCCCCeEEEEcCCChh--HHHHHHHHHHccCCC
Q 029984 133 RFRKHDEIIVGCQSGKR--SMMAATDLLNAGFAG 164 (184)
Q Consensus 133 ~l~~~~~ivv~c~~g~r--s~~~~~~L~~~G~~~ 164 (184)
.+.+++.+++++++|.. ....+..+++.|.+-
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~v 107 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPY 107 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCE
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcE
Confidence 67788899999998874 457889999999863
No 186
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=30.08 E-value=54 Score=23.73 Aligned_cols=32 Identities=13% Similarity=0.166 Sum_probs=25.7
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|-..|++
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v 153 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVV 153 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEE
Confidence 5778988876 6877888889999999877654
No 187
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=30.08 E-value=57 Score=25.13 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=26.1
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.++++++ +|.....++..|++.|.+.|+.
T Consensus 204 ~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~ 238 (284)
T 1u9y_A 204 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIA 238 (284)
T ss_dssp TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEE
Confidence 4677888875 7888888999999999987763
No 188
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=29.72 E-value=51 Score=23.43 Aligned_cols=32 Identities=9% Similarity=0.023 Sum_probs=25.9
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
.++++|+++++ +|.....++..|++.|.+.|.
T Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (187)
T 1g2q_A 120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLE 154 (187)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEE
Confidence 35778988875 788888899999999987654
No 189
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=29.70 E-value=59 Score=25.45 Aligned_cols=20 Identities=20% Similarity=0.399 Sum_probs=14.6
Q ss_pred CCCCCeEEEEcCCCh-hHHHH
Q 029984 134 FRKHDEIIVGCQSGK-RSMMA 153 (184)
Q Consensus 134 l~~~~~ivv~c~~g~-rs~~~ 153 (184)
+....||||+|..|. |+..+
T Consensus 236 ~~~~~PivVHCsaGvGRTGtf 256 (316)
T 3b7o_A 236 IMDAGPVVVHCSAGIGRTGTF 256 (316)
T ss_dssp STTCCCEEEEESSSSHHHHHH
T ss_pred cCCCCCEEEEcCCCCcHHHHH
Confidence 356789999998765 76543
No 190
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=29.58 E-value=53 Score=23.12 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=25.4
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcc-CCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G-~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.| ...|+.
T Consensus 95 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 130 (181)
T 1ufr_A 95 TGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYL 130 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 4678888875 7888888999999999 776653
No 191
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=29.52 E-value=61 Score=24.06 Aligned_cols=29 Identities=31% Similarity=0.398 Sum_probs=23.5
Q ss_pred eEEEEcCCC-hhHHHHHHHHHHccCCCeeec
Q 029984 139 EIIVGCQSG-KRSMMAATDLLNAGFAGITDI 168 (184)
Q Consensus 139 ~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l 168 (184)
.+-++|.+. +||..+=..|.+.|| +|.-+
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred eEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 477889864 699999999999999 46655
No 192
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.30 E-value=65 Score=21.16 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=19.4
Q ss_pred EEcCCChhHHHHHHHHHHccCCCeeecccc
Q 029984 142 VGCQSGKRSMMAATDLLNAGFAGITDIAGG 171 (184)
Q Consensus 142 v~c~~g~rs~~~~~~L~~~G~~~v~~l~GG 171 (184)
++|..|.-....+..|.+.|++ |.+++-.
T Consensus 10 ~I~G~G~iG~~la~~L~~~g~~-V~~id~~ 38 (141)
T 3llv_A 10 IVIGSEAAGVGLVRELTAAGKK-VLAVDKS 38 (141)
T ss_dssp EEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred EEECCCHHHHHHHHHHHHCCCe-EEEEECC
Confidence 3345566677788888888874 6666543
No 193
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=29.20 E-value=1.9e+02 Score=21.93 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=56.5
Q ss_pred CCcccCHHHHHHHHhCCCeEEEcCChhhHhcCCC-CCcEEeccccccCCCCCCCHHHHHH-HHhcCCCCCeEEEEcCCC-
Q 029984 71 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHA-TGAINVPYMYRVGSGMTKNLKFVEE-VSTRFRKHDEIIVGCQSG- 147 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghI-pgAi~ip~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ivv~c~~g- 147 (184)
.+.-++.+.++.+.+-++++.|.+...+... ++ +++.-++....... .....+.+.. +.+....++.|++.+.+.
T Consensus 26 d~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~~~~~~~k~~~~-~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP 103 (280)
T 1s4d_A 26 DPGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGAVLEFAGKRGGK-PSPKQRDISLRLVELARAGNRVLRLKGGDP 103 (280)
T ss_dssp CTTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTCCEEECSCCC---CCCCHHHHHHHHHHHHHTTCCEEEEESBCT
T ss_pred CHHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCCEEEeccccccc-cccCHHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 3456777777777777888888876544332 33 23332322110000 1112333333 333334456676665521
Q ss_pred ---hhHHHHHHHHHHccCCCeeecccc---HHHHHhCCCCC
Q 029984 148 ---KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 182 (184)
Q Consensus 148 ---~rs~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 182 (184)
.+.......|.+.|++ +.++.|= ..+....|.|+
T Consensus 104 ~i~g~g~~l~~~l~~~gi~-veviPGiSs~~aa~a~~Gipl 143 (280)
T 1s4d_A 104 FVFGRGGEEALTLVEHQVP-FRIVPGITAGIGGLAYAGIPV 143 (280)
T ss_dssp TSSSSHHHHHHHHHTTTCC-EEEECCCCTTTHHHHHTTCCS
T ss_pred ccccCHHHHHHHHHHCCCC-EEEEcCccHHHHHHHHcCCCc
Confidence 2455667778888874 6666542 33445566665
No 194
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=29.14 E-value=70 Score=25.82 Aligned_cols=32 Identities=25% Similarity=0.224 Sum_probs=27.9
Q ss_pred EEEEcCCChhHHHHHHHHHHccCCCeeeccccH
Q 029984 140 IIVGCQSGKRSMMAATDLLNAGFAGITDIAGGF 172 (184)
Q Consensus 140 ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~ 172 (184)
++|+|++-..+...+..|.+.|+. +..+.|++
T Consensus 303 ~lVF~~t~~~a~~l~~~L~~~~~~-~~~lhg~~ 334 (434)
T 2db3_A 303 TIVFVETKRGADFLASFLSEKEFP-TTSIHGDR 334 (434)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCC-EEEESTTS
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 899999988898999999999995 77788874
No 195
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=28.76 E-value=74 Score=23.67 Aligned_cols=31 Identities=26% Similarity=0.191 Sum_probs=23.6
Q ss_pred CCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 137 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 137 ~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
++.++++++ +|.....+...|++.|.+++.+
T Consensus 136 gr~VilvDd~laTG~Tl~~ai~~L~~~G~~~I~~ 169 (221)
T 1o5o_A 136 DKEVFLLDPMLATGVSSIKAIEILKENGAKKITL 169 (221)
T ss_dssp TCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 557777765 6777778888999998877664
No 196
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=28.73 E-value=48 Score=21.96 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=21.1
Q ss_pred eEEEEcCCC-hhHHHHHHHHHHccCCCeeeccccHH
Q 029984 139 EIIVGCQSG-KRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 139 ~ivv~c~~g-~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.|+|+|.+. .||..+-..|+...- ++.+...|..
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~-~~~v~SAGt~ 35 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK-SWKAESAGVE 35 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS-SCCEEEEESS
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 377888744 488887777777642 4444554443
No 197
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=28.70 E-value=1.1e+02 Score=19.05 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=13.0
Q ss_pred EEEEcCCChhHHHHHHHHHHccCCCeeecccc
Q 029984 140 IIVGCQSGKRSMMAATDLLNAGFAGITDIAGG 171 (184)
Q Consensus 140 ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG 171 (184)
|+++.++..........|...||..+.....|
T Consensus 7 ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~~ 38 (128)
T 1jbe_A 7 FLVVDDFSTMRRIVRNLLKELGFNNVEEAEDG 38 (128)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCCEEEESSH
T ss_pred EEEECCCHHHHHHHHHHHHHcCCcEEEeeCCH
Confidence 44443333333334444444555334333333
No 198
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=28.62 E-value=25 Score=22.88 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=17.7
Q ss_pred CCCeEEEEcCCChhHHHHH----HHHHHccCC
Q 029984 136 KHDEIIVGCQSGKRSMMAA----TDLLNAGFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~----~~L~~~G~~ 163 (184)
+.-.|++.|.+|.-+..++ ..+.+.|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 3345999999887433544 444556764
No 199
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=28.55 E-value=48 Score=23.97 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.6
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|.+.|..
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~ 151 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKI 151 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 7888888899999999877653
No 200
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=27.80 E-value=58 Score=22.84 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=25.4
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcc-CCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G-~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.| ...|+.
T Consensus 97 ~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~ 132 (181)
T 1a3c_A 97 TDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQL 132 (181)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEE
Confidence 4678888875 7888888999999997 776653
No 201
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=27.59 E-value=67 Score=26.53 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=27.3
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeeec
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITDI 168 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~l 168 (184)
++++|+++++ +|.....++..|++.|-+.|+.+
T Consensus 337 ~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~ 372 (459)
T 1ao0_A 337 EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVK 372 (459)
T ss_dssp TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEE
Confidence 4678999987 58888889999999998877653
No 202
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=27.40 E-value=75 Score=24.45 Aligned_cols=18 Identities=22% Similarity=0.392 Sum_probs=13.4
Q ss_pred CCCCeEEEEcCCCh-hHHH
Q 029984 135 RKHDEIIVGCQSGK-RSMM 152 (184)
Q Consensus 135 ~~~~~ivv~c~~g~-rs~~ 152 (184)
+...||||+|..|. |+..
T Consensus 216 ~~~~PivVHCsaGvGRTGt 234 (291)
T 2hc1_A 216 PGAGPTVVHCSAGVGRTGT 234 (291)
T ss_dssp SCCCCEEEECSSSSHHHHH
T ss_pred CCCCCEEEEeCCCCchhHH
Confidence 45679999998765 6654
No 203
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=27.02 E-value=1.3e+02 Score=19.92 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCCCeEEEEcCC------ChhHHHHHHHHHHccCC
Q 029984 124 LKFVEEVSTRFRKHDEIIVGCQS------GKRSMMAATDLLNAGFA 163 (184)
Q Consensus 124 ~~~~~~~~~~l~~~~~ivv~c~~------g~rs~~~~~~L~~~G~~ 163 (184)
.+.++.+.. +.+||||..+ +..+.++...|...|+.
T Consensus 10 ~e~i~~~i~----~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~ 51 (118)
T 2wul_A 10 AEQLDALVK----KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVR 51 (118)
T ss_dssp HHHHHHHHH----HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHh----cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCc
Confidence 455666554 3468888653 55788888999999874
No 204
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=26.89 E-value=84 Score=20.74 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=23.2
Q ss_pred eEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHH
Q 029984 139 EIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 175 (184)
Q Consensus 139 ~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W 175 (184)
+|+++.+...-.......|.+.||+-+.....|-.++
T Consensus 10 rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl 46 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEAL 46 (123)
T ss_dssp CEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 5677766655555677778888886333445555554
No 205
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=26.78 E-value=71 Score=22.62 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=25.7
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCC--Cee
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFA--GIT 166 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~--~v~ 166 (184)
.+++.|+++++ +|.....++..|++.|.. .|.
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~ 151 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIY 151 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEE
Confidence 35778888876 788888888999999987 654
No 206
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=26.56 E-value=54 Score=24.21 Aligned_cols=32 Identities=3% Similarity=-0.044 Sum_probs=26.0
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|-..|.+
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v 136 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKT 136 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEE
Confidence 4678888875 7888888999999999877654
No 207
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=26.55 E-value=49 Score=29.76 Aligned_cols=37 Identities=19% Similarity=0.289 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+.+|++|+|++-..+...+..|.+.|+. ...+.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCch
Confidence 5789999999999999999999999995 667888744
No 208
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=26.49 E-value=97 Score=21.87 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=23.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 175 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W 175 (184)
...|+|+.++..........|...||..|.....|-.++
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal 99 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEAL 99 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHH
Confidence 345666666555555666777777875466555555544
No 209
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=26.15 E-value=58 Score=23.80 Aligned_cols=32 Identities=13% Similarity=0.032 Sum_probs=26.0
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|-..|.+
T Consensus 117 ~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v 151 (211)
T 1pzm_A 117 ENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKT 151 (211)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEE
Confidence 5678888875 7888888999999999876653
No 210
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=26.00 E-value=75 Score=24.55 Aligned_cols=19 Identities=21% Similarity=0.431 Sum_probs=14.0
Q ss_pred CCCCeEEEEcCCCh-hHHHH
Q 029984 135 RKHDEIIVGCQSGK-RSMMA 153 (184)
Q Consensus 135 ~~~~~ivv~c~~g~-rs~~~ 153 (184)
....||||+|..|. |+...
T Consensus 220 ~~~~PivVHCsaGvGRTGtf 239 (297)
T 1jln_A 220 EGRGPVVVHCSAGIGRTGCF 239 (297)
T ss_dssp TTSCCEEEESSSSSHHHHHH
T ss_pred CCCCCEEEEeCCCchhhHHH
Confidence 45789999999765 76543
No 211
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=25.65 E-value=51 Score=21.33 Aligned_cols=26 Identities=8% Similarity=0.063 Sum_probs=18.2
Q ss_pred CeEEEEcCCChhHHHHH----HHHHHccCC
Q 029984 138 DEIIVGCQSGKRSMMAA----TDLLNAGFA 163 (184)
Q Consensus 138 ~~ivv~c~~g~rs~~~~----~~L~~~G~~ 163 (184)
++|++.|.+|..+..++ ..+.+.|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 46999999998544444 555667875
No 212
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=25.58 E-value=83 Score=26.35 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=26.9
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....++..|++.|-+.|++
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~ 392 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYL 392 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEE
Confidence 4678999887 5888889999999999987765
No 213
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=25.50 E-value=1.2e+02 Score=20.23 Aligned_cols=46 Identities=7% Similarity=0.148 Sum_probs=29.1
Q ss_pred HHHHHHHHhcCCCCCeEEEEcCC----ChhHHHHHHHHHHccCCCeeeccc
Q 029984 124 LKFVEEVSTRFRKHDEIIVGCQS----GKRSMMAATDLLNAGFAGITDIAG 170 (184)
Q Consensus 124 ~~~~~~~~~~l~~~~~ivv~c~~----g~rs~~~~~~L~~~G~~~v~~l~G 170 (184)
.+.+-.....++.++++.+...- .+.-......|++.||.+++ ++|
T Consensus 6 ~~qivd~il~~~egtri~iLAPvv~~rKg~~~~ll~~l~~~Gf~Rvr-vDG 55 (119)
T 3fpn_A 6 IEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVR-IDR 55 (119)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEEEEEEECSCCHHHHHHHHHTTCCEEE-ETT
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCCCcHHHHHHHHHhCCCeEEE-ECC
Confidence 34444444456778888777641 22334678899999997765 344
No 214
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=25.33 E-value=66 Score=23.34 Aligned_cols=48 Identities=13% Similarity=0.162 Sum_probs=32.2
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCee---ecc----ccHHHHHhCCCCC
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT---DIA----GGFAAWRQNGLPT 182 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~---~l~----GG~~~W~~~g~p~ 182 (184)
-+++.|+++++ +|.....++..|++.|.+.|. +++ +|.+...+.|.|+
T Consensus 115 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~ 172 (211)
T 2aee_A 115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKL 172 (211)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCE
T ss_pred CCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCE
Confidence 35678888875 788888889999999987642 232 3455555455543
No 215
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=25.22 E-value=1.3e+02 Score=18.83 Aligned_cols=24 Identities=8% Similarity=0.008 Sum_probs=11.5
Q ss_pred eEEEEcCCChhHHHHHHHHHHccC
Q 029984 139 EIIVGCQSGKRSMMAATDLLNAGF 162 (184)
Q Consensus 139 ~ivv~c~~g~rs~~~~~~L~~~G~ 162 (184)
+|+++.++..........|...||
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~ 32 (130)
T 3eod_A 9 QILIVEDEQVFRSLLDSWFSSLGA 32 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCc
Confidence 444444444344444455555555
No 216
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=25.17 E-value=2e+02 Score=21.98 Aligned_cols=109 Identities=17% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCcccCHHHHHHHHhCCCeEEEcCChhhHhcCCC-CCcEEeccccccCCCCCCCHHHHH-HHHhcCCCCCeEEEEcCC--
Q 029984 71 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHA-TGAINVPYMYRVGSGMTKNLKFVE-EVSTRFRKHDEIIVGCQS-- 146 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghI-pgAi~ip~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ivv~c~~-- 146 (184)
.+.-++.+.++.+.+-++++.|.|...+... ++ +++..+.......... ...+.+. .+.+....++.|++.+.+
T Consensus 36 dp~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~i~~~k~~~~~~-~~~~~i~~~l~~~~~~G~~Vv~L~~GDP 113 (294)
T 2ybo_A 36 DPGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESCQRIYVGKRCGHHS-LPQEEINELLVRLARQQRRVVRLKGGDP 113 (294)
T ss_dssp CGGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTSEEEECC---------CHHHHHHHHHHHHHTTCCEEEEEEBCT
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCCeEEeccccccccc-CCHHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence 3445677777666566777788775554432 22 2333222210000000 1123332 333334445556665432
Q ss_pred C--hhHHHHHHHHHHccCCCeeecccc---HHHHHhCCCCC
Q 029984 147 G--KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 182 (184)
Q Consensus 147 g--~rs~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 182 (184)
+ .+.......|.+.|++ +.++.|= ..+....|.|+
T Consensus 114 ~i~g~g~~l~~~l~~~gi~-vevIPGiSS~~aa~a~~Gipl 153 (294)
T 2ybo_A 114 FIFGRGAEELERLLEAGVD-CQVVPGVTAASGCSTYAGIPL 153 (294)
T ss_dssp TSSSSHHHHHHHHHHTTCC-EEEECCCCHHHHHHHHTTCCS
T ss_pred CccCCHHHHHHHHHHCCCC-EEEECCHHHHHHHHHHcCCCc
Confidence 1 2455667788888874 7666553 33455567765
No 217
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=24.97 E-value=78 Score=23.27 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=24.6
Q ss_pred CCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 137 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 137 ~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
++.++++++ +|.....+...|++.|.+++.+
T Consensus 123 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 156 (208)
T 1v9s_A 123 ERRAFLLDPMLATGGSASLALSLLKERGATGVKL 156 (208)
T ss_dssp GSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 457787775 6888888889999999888764
No 218
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=24.89 E-value=1.2e+02 Score=18.20 Aligned_cols=8 Identities=13% Similarity=-0.334 Sum_probs=3.3
Q ss_pred HHHHHccC
Q 029984 155 TDLLNAGF 162 (184)
Q Consensus 155 ~~L~~~G~ 162 (184)
..+....+
T Consensus 39 ~~l~~~~~ 46 (119)
T 2j48_A 39 DQLDLLQP 46 (119)
T ss_dssp HHHHHHCC
T ss_pred HHHHhcCC
Confidence 33444444
No 219
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=24.30 E-value=71 Score=19.45 Aligned_cols=26 Identities=19% Similarity=0.137 Sum_probs=21.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHH
Q 029984 134 FRKHDEIIVGCQSGKRSMMAATDLLN 159 (184)
Q Consensus 134 l~~~~~ivv~c~~g~rs~~~~~~L~~ 159 (184)
+..|.+|+++|.+...+......+.+
T Consensus 52 IAGDDTIlvi~r~~~~a~~l~~~l~~ 77 (79)
T 2zfz_A 52 IAGDDTILVVAREPTTGAQLAGMFEN 77 (79)
T ss_dssp EECSSEEEEEECTTCCHHHHHHHHHH
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHh
Confidence 35688999999999888888877765
No 220
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=24.20 E-value=88 Score=28.33 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.+.++++|+|++-..+...+..|.+.|+. ..+|.|...
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 46789999999999999999999999996 667877754
No 221
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=24.15 E-value=1.4e+02 Score=18.90 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=29.7
Q ss_pred HHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCC
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 163 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~ 163 (184)
.....+..+..+..+.|..+...-...+..++++.||+
T Consensus 42 ~tkkaL~~l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~ 79 (98)
T 1jdq_A 42 ETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHE 79 (98)
T ss_dssp HHHHHHHTCCTTCEEEEEESSCTHHHHHHHHHHHSSCC
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 45566777888888888877766666788999999996
No 222
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=24.09 E-value=88 Score=24.67 Aligned_cols=32 Identities=13% Similarity=0.029 Sum_probs=26.4
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.++++++ +|.....++..|++.|-+.|+.
T Consensus 215 ~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 249 (319)
T 3dah_A 215 EGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFA 249 (319)
T ss_dssp CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEE
T ss_pred CCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEE
Confidence 4678888764 7888889999999999988764
No 223
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=23.76 E-value=61 Score=19.34 Aligned_cols=26 Identities=19% Similarity=0.368 Sum_probs=20.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHH
Q 029984 134 FRKHDEIIVGCQSGKRSMMAATDLLN 159 (184)
Q Consensus 134 l~~~~~ivv~c~~g~rs~~~~~~L~~ 159 (184)
+..|.+|++.|+++..+......+.+
T Consensus 44 IAGDDTIlvi~r~~~~a~~l~~~i~~ 69 (71)
T 1b4b_A 44 ICGDDTCLIICRTPKDAKKVSNQLLS 69 (71)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHT
T ss_pred EeeCCEEEEEECCHHHHHHHHHHHHH
Confidence 35688999999998888877777654
No 224
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=23.72 E-value=1.3e+02 Score=19.00 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=21.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHHHH
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFAAW 175 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~~W 175 (184)
...|+++.++..........|...||. +.....+-.++
T Consensus 15 ~~~ilivdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~al 52 (138)
T 2b4a_A 15 PFRVTLVEDEPSHATLIQYHLNQLGAE-VTVHPSGSAFF 52 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCE-EEEESSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCCE-EEEeCCHHHHH
Confidence 445555555555555666777777773 55555554444
No 225
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=23.68 E-value=99 Score=22.18 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=25.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHccCCCeeecc
Q 029984 137 HDEIIVGCQSGKRSMMAATDLLNAGFAGITDIA 169 (184)
Q Consensus 137 ~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~ 169 (184)
++.|+|...+|.-...++..|.+.|++ |..+.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~-V~~~~ 52 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHE-PVAMV 52 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCe-EEEEE
Confidence 567888888888888899999999984 76554
No 226
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=23.67 E-value=74 Score=23.38 Aligned_cols=31 Identities=10% Similarity=0.117 Sum_probs=23.7
Q ss_pred CCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 137 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 137 ~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
++.++++++ +|.....+...|++.|.++++.
T Consensus 121 ~r~vilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 154 (208)
T 2e55_A 121 GKIVVILDPMLATGGTLEVALREILKHSPLKVKS 154 (208)
T ss_dssp TSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 557777765 6877878889999999877653
No 227
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=23.53 E-value=77 Score=25.10 Aligned_cols=32 Identities=25% Similarity=0.173 Sum_probs=26.2
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.++++++ +|.....++..|++.|.++|+.
T Consensus 212 ~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 246 (326)
T 3s5j_B 212 KDRVAILVDDMADTCGTICHAADKLLSAGATRVYA 246 (326)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEE
Confidence 4677888764 7888889999999999987764
No 228
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=23.51 E-value=68 Score=19.58 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=21.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHc
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNA 160 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~ 160 (184)
..|.+|++.|+++..+......+.+.
T Consensus 48 AGDDTIlvi~r~~~~a~~l~~~i~~l 73 (78)
T 1xxa_A 48 AGDDTIFTTPANGFTVKDLYEAILEL 73 (78)
T ss_dssp ECSSEEEEEECTTCCHHHHHHHHHTT
T ss_pred ecCCEEEEEECCHHHHHHHHHHHHHH
Confidence 46789999999998888888877654
No 229
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=23.23 E-value=54 Score=28.73 Aligned_cols=37 Identities=19% Similarity=0.264 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
+...++|||++-..+...+..|.+.|+. +..+.|++.
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~~-v~~lHG~l~ 431 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGIN-AVAYYRGLD 431 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECTTSC
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCCc-EEEecCCCC
Confidence 4568999999988899999999999984 777888764
No 230
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=22.94 E-value=90 Score=22.79 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=25.0
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
+++.|+++++ +|.....+...|++.|-+.+.
T Consensus 115 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 148 (204)
T 3hvu_A 115 EGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVK 148 (204)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEE
T ss_pred CCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEE
Confidence 5678888875 788888899999999987654
No 231
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=22.89 E-value=1.3e+02 Score=18.14 Aligned_cols=38 Identities=3% Similarity=-0.028 Sum_probs=28.7
Q ss_pred HHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCC
Q 029984 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 163 (184)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~ 163 (184)
.....+..+..+..+.|..+.......+..++++.||+
T Consensus 26 ~~kkal~~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~ 63 (82)
T 3lvj_C 26 MVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHE 63 (82)
T ss_dssp HHHHHHHTSCTTCEEEEEECCTTHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 45566777777777877777765666788889999996
No 232
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=22.80 E-value=76 Score=22.58 Aligned_cols=31 Identities=16% Similarity=0.053 Sum_probs=25.0
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
+++.++++++ +|.....++..|++.|-+.++
T Consensus 94 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 127 (181)
T 2ywu_A 94 HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVR 127 (181)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEE
Confidence 5678888875 788888899999999987654
No 233
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=22.65 E-value=1.2e+02 Score=20.70 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=25.4
Q ss_pred HHHHHHHhcCCCCCeEEEEcCC-ChhHHHHHHHHHHcc----CCCeeeccc
Q 029984 125 KFVEEVSTRFRKHDEIIVGCQS-GKRSMMAATDLLNAG----FAGITDIAG 170 (184)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~-g~rs~~~~~~L~~~G----~~~v~~l~G 170 (184)
+.+......++.+..++|.|+- |+.-...+..+...- ..++.++.|
T Consensus 46 ~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~~~~~~~~~~~v~vI~G 96 (150)
T 3ipr_A 46 GQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSG 96 (150)
T ss_dssp HHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHHTTSCHHHHTTEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHhhhhccCCCEEEEeC
Confidence 3444455556666678888884 445445554444330 235776654
No 234
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=22.11 E-value=1.4e+02 Score=19.09 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=10.8
Q ss_pred eEEEEcCCChhHHHHHHHHHHccC
Q 029984 139 EIIVGCQSGKRSMMAATDLLNAGF 162 (184)
Q Consensus 139 ~ivv~c~~g~rs~~~~~~L~~~G~ 162 (184)
.|+++.++..........|...||
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~ 30 (140)
T 3h5i_A 7 KILIVEDSKFQAKTIANILNKYGY 30 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCC
Confidence 344444443333444455555555
No 235
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=21.96 E-value=1.6e+02 Score=21.66 Aligned_cols=29 Identities=14% Similarity=0.163 Sum_probs=23.5
Q ss_pred EEEEcCCChhHHHHHHHHHHccCC--Ceeec
Q 029984 140 IIVGCQSGKRSMMAATDLLNAGFA--GITDI 168 (184)
Q Consensus 140 ivv~c~~g~rs~~~~~~L~~~G~~--~v~~l 168 (184)
++|+|.+...+..+...|++.|+. ++.++
T Consensus 199 ~~i~~~nD~~A~g~~~al~~~g~~v~di~vv 229 (306)
T 8abp_A 199 WLIVGMNDSTVLGGVRATEGQGFKAADIIGI 229 (306)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCCCCceEEE
Confidence 468898888888899999999995 66653
No 236
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=21.95 E-value=82 Score=23.41 Aligned_cols=32 Identities=6% Similarity=0.053 Sum_probs=25.9
Q ss_pred CCCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 135 RKHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 135 ~~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
.+++.|+++++ +|.....++..|++.|.+.|.
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 170 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVE 170 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEE
Confidence 46788999875 788888899999999987553
No 237
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.67 E-value=1.6e+02 Score=18.61 Aligned_cols=24 Identities=17% Similarity=0.220 Sum_probs=10.5
Q ss_pred eEEEEcCCChhHHHHHHHHHHccC
Q 029984 139 EIIVGCQSGKRSMMAATDLLNAGF 162 (184)
Q Consensus 139 ~ivv~c~~g~rs~~~~~~L~~~G~ 162 (184)
.|+++.++..........|.+.||
T Consensus 8 ~iLivdd~~~~~~~l~~~l~~~g~ 31 (140)
T 3grc_A 8 RILICEDDPDIARLLNLMLEKGGF 31 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCC
Confidence 344444433333344444445555
No 238
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=21.48 E-value=75 Score=23.32 Aligned_cols=47 Identities=17% Similarity=0.198 Sum_probs=28.8
Q ss_pred cCCCCCcEEeccccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCChh------HHHHHHHHHHccCCCeeecc
Q 029984 101 AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR------SMMAATDLLNAGFAGITDIA 169 (184)
Q Consensus 101 ~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~r------s~~~~~~L~~~G~~~v~~l~ 169 (184)
.-.|||-++.|-. .+..|+||++.++.. -...+..|.+.||. |..++
T Consensus 40 G~~i~g~l~~P~~---------------------~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~-Vl~~D 92 (259)
T 4ao6_A 40 GRTVPGVYWSPAE---------------------GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGIS-AMAID 92 (259)
T ss_dssp TEEEEEEEEEESS---------------------SCCSEEEEEEC--------CHHHHHHHHHHHTTEE-EEEEC
T ss_pred CeEEEEEEEeCCC---------------------CCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCe-EEeec
Confidence 3468888888852 234588888865432 12467889999995 54433
No 239
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=21.45 E-value=91 Score=22.50 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=24.9
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHcc-CCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAG-FAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G-~~~v~ 166 (184)
+++.|+++++ +|.....++..|++.| .+.|+
T Consensus 111 ~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~ 145 (201)
T 1w30_A 111 DDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQ 145 (201)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEE
Confidence 4678888875 7888888899999999 76664
No 240
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=21.42 E-value=61 Score=24.32 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=13.9
Q ss_pred CCCCeEEEEcCCCh-hHHHH
Q 029984 135 RKHDEIIVGCQSGK-RSMMA 153 (184)
Q Consensus 135 ~~~~~ivv~c~~g~-rs~~~ 153 (184)
....||||+|..|. |+...
T Consensus 174 ~~~~pivVHCsaGvGRTGtf 193 (253)
T 1p15_A 174 SGNHPITVHCSAGAGRTGTF 193 (253)
T ss_dssp TTSCCEEEESSSSSHHHHHH
T ss_pred cCCCCEEEEcCCCCchhHHH
Confidence 45679999999765 76543
No 241
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=21.21 E-value=1.5e+02 Score=20.70 Aligned_cols=44 Identities=23% Similarity=0.248 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCCCeEEEEcCC-ChhHHHHHHHHHHccCCCeeeccc
Q 029984 125 KFVEEVSTRFRKHDEIIVGCQS-GKRSMMAATDLLNAGFAGITDIAG 170 (184)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~-g~rs~~~~~~L~~~G~~~v~~l~G 170 (184)
+.+....+.++.++.|+|.|+- |+.-...+..+.. ..++.++.|
T Consensus 65 ~~~~~~i~~~~~~~gVLiLtDl~GGSP~n~a~~~~~--~~~v~vItG 109 (159)
T 3mtq_A 65 QQVEALVARFPAQDELIVITDIFAGSVNNEFVRFLS--RPHFHLLSG 109 (159)
T ss_dssp HHHHHHHHTSCTTSEEEEEESCTTSHHHHHHHGGGG--STTEEEEEC
T ss_pred HHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHhc--CCCeEEEeC
Confidence 5667777778878888888884 4343344433332 346776654
No 242
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=21.09 E-value=1.5e+02 Score=18.44 Aligned_cols=23 Identities=13% Similarity=0.030 Sum_probs=8.8
Q ss_pred EEEEcCCChhHHHHHHHHHHccC
Q 029984 140 IIVGCQSGKRSMMAATDLLNAGF 162 (184)
Q Consensus 140 ivv~c~~g~rs~~~~~~L~~~G~ 162 (184)
|+++.++..........|.+.||
T Consensus 9 ilivdd~~~~~~~l~~~L~~~g~ 31 (132)
T 3lte_A 9 ILVVDDDQAMAAAIERVLKRDHW 31 (132)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCHHHHHHHHHHHHHCCc
Confidence 33333333333333344444444
No 243
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=20.90 E-value=86 Score=28.65 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHccCCCeeeccccHH
Q 029984 135 RKHDEIIVGCQSGKRSMMAATDLLNAGFAGITDIAGGFA 173 (184)
Q Consensus 135 ~~~~~ivv~c~~g~rs~~~~~~L~~~G~~~v~~l~GG~~ 173 (184)
.+.+|++|+|.+-..|...+..|.+.|+. ..+|.|...
T Consensus 458 ~~gqpvLVft~Sie~sE~Ls~~L~~~Gi~-~~vLnak~~ 495 (922)
T 1nkt_A 458 AKGQPVLIGTTSVERSEYLSRQFTKRRIP-HNVLNAKYH 495 (922)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHTTCC-CEEECSSCH
T ss_pred hcCCcEEEEECCHHHHHHHHHHHHHCCCC-EEEecCChh
Confidence 45789999999999999999999999996 667777754
No 244
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.87 E-value=1.7e+02 Score=18.56 Aligned_cols=7 Identities=0% Similarity=-0.187 Sum_probs=2.7
Q ss_pred HHHHccC
Q 029984 156 DLLNAGF 162 (184)
Q Consensus 156 ~L~~~G~ 162 (184)
.+....+
T Consensus 43 ~~~~~~~ 49 (136)
T 3t6k_A 43 QIYKNLP 49 (136)
T ss_dssp HHHHSCC
T ss_pred HHHhCCC
Confidence 3334333
No 245
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=20.85 E-value=82 Score=23.17 Aligned_cols=31 Identities=6% Similarity=0.063 Sum_probs=25.1
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
+++.|+++++ +|.....+...|++.|-+.|.
T Consensus 133 ~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~ 166 (225)
T 2jbh_A 133 AGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIK 166 (225)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888875 788888888999999987665
No 246
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=20.82 E-value=75 Score=19.55 Aligned_cols=26 Identities=19% Similarity=0.344 Sum_probs=20.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHH
Q 029984 134 FRKHDEIIVGCQSGKRSMMAATDLLN 159 (184)
Q Consensus 134 l~~~~~ivv~c~~g~rs~~~~~~L~~ 159 (184)
+..|.+|+++|.++..+......+.+
T Consensus 56 IAGDDTIlvi~r~~~~a~~l~~~l~~ 81 (83)
T 2p5m_A 56 ICGDDTILIICRTPEDTEGVKNRLLE 81 (83)
T ss_dssp EECSSEEEEECSSHHHHHHHHHHHHT
T ss_pred EecCCEEEEEECCHHHHHHHHHHHHH
Confidence 35688999999998888877777654
No 247
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=20.77 E-value=86 Score=22.19 Aligned_cols=32 Identities=13% Similarity=0.010 Sum_probs=25.1
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.|+++++ +|.....+...|++.|.+.+..
T Consensus 90 ~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~ 124 (177)
T 3ohp_A 90 KGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRI 124 (177)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEE
Confidence 4678888875 7888888889999999876553
No 248
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=20.71 E-value=2.5e+02 Score=20.39 Aligned_cols=108 Identities=19% Similarity=0.065 Sum_probs=56.6
Q ss_pred CCcccCHHHHHHHHhCCCeEEEcCChhhHhcCCCCCcEEeccccccCCCCCCCHHHH-HHHHhcCCCCCeEEEEcCC--C
Q 029984 71 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV-EEVSTRFRKHDEIIVGCQS--G 147 (184)
Q Consensus 71 ~~~~i~~~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~~~~~~~~~~~~~~-~~~~~~l~~~~~ivv~c~~--g 147 (184)
.+.-++.+.++.+.+-+.++.|.+...+... ++ ++..++........ ....+.+ +.+.+...+++.|++.+.+ +
T Consensus 14 ~~~~LT~~A~~~L~~advv~~~~~~~~~~l~-~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~g~~V~~l~~GDP~ 90 (235)
T 1ve2_A 14 GPEHLTLKALRVLEVAEVVLHDRLVHPGVLA-LA-KGELVPVGKEGYGG-KTPQEAITARLIALAREGRVVARLKGGDPM 90 (235)
T ss_dssp SGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TC-CSEEEEC--------CCCHHHHHHHHHHHHHTTCEEEEEESBCTT
T ss_pred CHHHHHHHHHHHHHhCCEEEEeCCCCHHHHH-hh-CcEEEEecccCccc-ccCHHHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 3455777777777777877888776555543 23 44333321000000 1122333 3334444456677666542 1
Q ss_pred --hhHHHHHHHHHHccCCCeeecccc---HHHHHhCCCCC
Q 029984 148 --KRSMMAATDLLNAGFAGITDIAGG---FAAWRQNGLPT 182 (184)
Q Consensus 148 --~rs~~~~~~L~~~G~~~v~~l~GG---~~~W~~~g~p~ 182 (184)
.........+.+.|++ +.++.|= ..+....|.|+
T Consensus 91 i~~~~~~l~~~l~~~gi~-v~viPGiSs~~aa~a~~g~pl 129 (235)
T 1ve2_A 91 VFGRGGEEALALRRAGIP-FEVVPGVTSAVGALSALGLPL 129 (235)
T ss_dssp SSTTHHHHHHHHHHHTCC-EEEECCCCTTHHHHHHTTCCS
T ss_pred cccCHHHHHHHHHHCCCC-EEEECCHhHHHHHHHHcCCCc
Confidence 2345566777788874 7666543 34556667775
No 249
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=20.63 E-value=1.6e+02 Score=18.15 Aligned_cols=7 Identities=0% Similarity=-0.429 Sum_probs=2.8
Q ss_pred HHHHccC
Q 029984 156 DLLNAGF 162 (184)
Q Consensus 156 ~L~~~G~ 162 (184)
.+....+
T Consensus 41 ~~~~~~~ 47 (120)
T 3f6p_A 41 MVEELQP 47 (120)
T ss_dssp HHHTTCC
T ss_pred HHhhCCC
Confidence 3344444
No 250
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=20.57 E-value=93 Score=23.53 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=28.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHc-cCCCeeeccccHH
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNA-GFAGITDIAGGFA 173 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~-G~~~v~~l~GG~~ 173 (184)
.+.++||+|+.-.........|... |+. +..++|++.
T Consensus 111 ~~~kvlIFs~~~~~~~~l~~~L~~~~g~~-~~~l~G~~~ 148 (271)
T 1z5z_A 111 EGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGELS 148 (271)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHHHCSC-CCEECTTSC
T ss_pred CCCeEEEEeccHHHHHHHHHHHHHhcCCc-EEEEECCCC
Confidence 4667999999877777888888874 885 667888853
No 251
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=20.51 E-value=1e+02 Score=23.87 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=25.8
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
+++.++++++ +|.....++..|++.|-+.++.
T Consensus 202 ~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 236 (286)
T 3lrt_A 202 NGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYV 236 (286)
T ss_dssp TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEE
Confidence 5677888764 7888889999999999877653
No 252
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=20.42 E-value=1e+02 Score=21.11 Aligned_cols=43 Identities=21% Similarity=0.292 Sum_probs=24.3
Q ss_pred HHHHHHhcC-CCCCeEEEEcCC-ChhHHHHHHHHHHccCCCeeeccc
Q 029984 126 FVEEVSTRF-RKHDEIIVGCQS-GKRSMMAATDLLNAGFAGITDIAG 170 (184)
Q Consensus 126 ~~~~~~~~l-~~~~~ivv~c~~-g~rs~~~~~~L~~~G~~~v~~l~G 170 (184)
.+....+.+ +.++.|+|.|+- |+.-...+..+.+ + .++.++.|
T Consensus 49 ~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l~~-~-~~v~vItG 93 (144)
T 3lfh_A 49 EVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMMK-E-YDVKVITG 93 (144)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHHHH-H-HCCEEEES
T ss_pred HHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHHhc-C-CCEEEEeC
Confidence 444555556 667788888884 4444445544433 2 35665544
No 253
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=20.38 E-value=1.1e+02 Score=23.73 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=13.7
Q ss_pred CCCCeEEEEcCCCh-hHHHH
Q 029984 135 RKHDEIIVGCQSGK-RSMMA 153 (184)
Q Consensus 135 ~~~~~ivv~c~~g~-rs~~~ 153 (184)
..+.||||+|..|. |+...
T Consensus 220 ~~~~PivVHCsaGvGRTGtf 239 (306)
T 3m4u_A 220 VTTSPILVHCSAGIGRTGTL 239 (306)
T ss_dssp CCSSCEEEECSSSSHHHHHH
T ss_pred CCCCCEEEEcCCCCcchhee
Confidence 34679999998765 66543
No 254
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=20.31 E-value=89 Score=22.35 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=25.1
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
+++.|+++++ +|.....+...|++.|.+.+.
T Consensus 93 ~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~ 126 (186)
T 3o7m_A 93 TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALK 126 (186)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEE
Confidence 5678888875 788888899999999987654
No 255
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=20.31 E-value=84 Score=23.09 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=23.5
Q ss_pred CCeEEEEcC---CChhHHHHHHHHHHccCCCeee
Q 029984 137 HDEIIVGCQ---SGKRSMMAATDLLNAGFAGITD 167 (184)
Q Consensus 137 ~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~~ 167 (184)
++.++++++ +|.....+...|++.|.+++.+
T Consensus 123 ~r~VilvDd~laTG~T~~~ai~~L~~~G~~~I~~ 156 (208)
T 2ehj_A 123 ERMALIVDPMLATGGSVIATIDLLKKAGCSSIKV 156 (208)
T ss_dssp GCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCccccHHHHHHHHHHHHHcCCCEEEE
Confidence 456777764 6877878889999999877654
No 256
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=20.30 E-value=70 Score=25.82 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=21.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHccCC
Q 029984 136 KHDEIIVGCQSGKRSMMAATDLLNAGFA 163 (184)
Q Consensus 136 ~~~~ivv~c~~g~rs~~~~~~L~~~G~~ 163 (184)
++.+|+|...+|..|..++..|.+.||+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 3456777777778888888888888875
No 257
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=20.28 E-value=87 Score=23.21 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=25.1
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
+++.|+++++ +|.....+...|++.|-+.|.
T Consensus 141 ~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~ 174 (233)
T 1fsg_A 141 RDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMR 174 (233)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888875 788888899999999987654
No 258
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=20.18 E-value=53 Score=23.48 Aligned_cols=38 Identities=21% Similarity=0.165 Sum_probs=24.5
Q ss_pred CCeEEEEcCCCh-hHHHHHHHHHH----ccCCCeeeccccHHHH
Q 029984 137 HDEIIVGCQSGK-RSMMAATDLLN----AGFAGITDIAGGFAAW 175 (184)
Q Consensus 137 ~~~ivv~c~~g~-rs~~~~~~L~~----~G~~~v~~l~GG~~~W 175 (184)
.-+|+|+|.+.. ||..+-..|+. .|- ++.+..-|...|
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~-~~~v~SAGt~~~ 76 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKSKALGK-DWEAKSAGVFAP 76 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHHHHTTC-CCEEEEEETTCC
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHHHhcCC-ceEEEEeeecCc
Confidence 346999997544 88877766643 343 466666666554
No 259
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=20.03 E-value=97 Score=22.76 Aligned_cols=31 Identities=16% Similarity=0.034 Sum_probs=24.5
Q ss_pred CCCeEEEEcC---CChhHHHHHHHHHHccCCCee
Q 029984 136 KHDEIIVGCQ---SGKRSMMAATDLLNAGFAGIT 166 (184)
Q Consensus 136 ~~~~ivv~c~---~g~rs~~~~~~L~~~G~~~v~ 166 (184)
++++|+++++ +|.....++..|++.|.+.+.
T Consensus 124 ~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~ 157 (226)
T 2ps1_A 124 ENKRILIIDDVMTAGTAINEAFEIISNAKGQVVG 157 (226)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CcCEEEEEEecccChHHHHHHHHHHHHcCCeEEE
Confidence 5778888875 688888888999999986543
No 260
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=20.00 E-value=1.1e+02 Score=18.13 Aligned_cols=39 Identities=10% Similarity=-0.038 Sum_probs=29.1
Q ss_pred HHHHHHHhcCCCCCeEEEEcCCChhHHHHHHHHHHccCC
Q 029984 125 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAGFA 163 (184)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~g~rs~~~~~~L~~~G~~ 163 (184)
-.....+..+..+..+.|..+.......+-.++.+.||+
T Consensus 21 l~~k~al~~l~~G~~L~V~~dd~~a~~di~~~~~~~G~~ 59 (78)
T 1pav_A 21 MELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQE 59 (78)
T ss_dssp HHHHHHHTTSCTTCCEECCBSSSCHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHcCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 355666777877877877777665556778889999985
Done!