BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029987
(184 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356537904|ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
Length = 298
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 115/178 (64%), Gaps = 19/178 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERG----------------QGRARRGRGRGRGPSGSVSG 44
MA+ +DMSLDD IK+R + GR G R +G+ +G
Sbjct: 1 MASSLDMSLDDRIKNRSNNRGRGRGGRGRAHSGRGPSGTLNGRRMVGAVNSRRMAGAGNG 60
Query: 45 GRMTGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYV 103
GR TGA RRGPL N RPSSY IAKS RR R FPWQHDLFEDSLRAAGI G+EVGTKLYV
Sbjct: 61 GRTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYV 120
Query: 104 SNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
SNL GVTN+DIRELFSE+GELKR+A+H+DKNG PS S+ + S F LK Y
Sbjct: 121 SNLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAF--AALKRY 176
>gi|356569696|ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
Length = 298
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 118/177 (66%), Gaps = 18/177 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERG-----------QGRARRGRGRG----RGPSGSVSGG 45
MA+ +DMSLDD IK+R R RG G GR G R +G+ +GG
Sbjct: 1 MASSLDMSLDDRIKNRSNRGRGRGGRGRAHSGRGPSGALNGGRMAGAVSSRRMAGASNGG 60
Query: 46 RMTGAARRGPL-SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVS 104
R TGA RRGPL N RPSSY IAKS RR R FPWQHDLFEDSLRAAGI G+EVGTKLYVS
Sbjct: 61 RTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVS 120
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
NL GVTN+DIRELFSE+GELKR+A+H+DKNG PS S+ + S F LK Y
Sbjct: 121 NLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAF--AALKRY 175
>gi|225453197|ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/159 (66%), Positives = 123/159 (77%), Gaps = 7/159 (4%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTG-AARRGPL-SN 58
MAT +DMSLDDIIK R SER RG+GRARRGRG GS +GGRM+G RRGPL N
Sbjct: 1 MATSLDMSLDDIIK-RSNSERVRGRGRARRGRGPI---GGSFNGGRMSGIPPRRGPLRVN 56
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
ARPSSY IAKS RRT+ PWQHDLFEDSLRAAG+ G+E GTKLY+SNL GVTN+DIREL
Sbjct: 57 ARPSSYAIAKSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIREL 115
Query: 119 FSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
FSEIG++KRYA+H++KNGRPS S+ + S F V+
Sbjct: 116 FSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVK 154
>gi|224077330|ref|XP_002305214.1| predicted protein [Populus trichocarpa]
gi|222848178|gb|EEE85725.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 115/161 (71%), Gaps = 12/161 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
MAT VDMSLDDIIK ++ R RG+ R RG GR + GRM+GA RRGPLS NA
Sbjct: 1 MATTVDMSLDDIIKKNRERGRGRGRASRGRDRGPGR----FFNNGRMSGAVRRGPLSVNA 56
Query: 60 RPSSYTIAKSF-------RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
RP Y+IAK+ RR R+ PWQHDL EDS+RAAGI+G+EVGTKLYVSNL GVTN
Sbjct: 57 RPPKYSIAKASSKLWMPSRRIRSLPWQHDLLEDSIRAAGITGLEVGTKLYVSNLDYGVTN 116
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
+DIRELF+EIG+LKR+A+H+DKNGR + S+ + S F
Sbjct: 117 EDIRELFAEIGDLKRFAVHYDKNGRSTGSAEVMYTRRSDAF 157
>gi|255582255|ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 268
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/162 (59%), Positives = 114/162 (70%), Gaps = 8/162 (4%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
M+T VDMSLDDIIK ++ R R GS SGGRMTGA R+GPLS NA
Sbjct: 1 MSTSVDMSLDDIIKKNRERGRGGRGRARRGRGR-----GGSFSGGRMTGAGRKGPLSVNA 55
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS ++IAK RR RN PWQHDL EDS+RAAGI+G+EVGTKLYVSNL GV+N+DIRELF
Sbjct: 56 RPSQFSIAKPNRRIRNLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELF 115
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
+EIG+LKRYA+H+DKNGR + S+ + S F LK Y
Sbjct: 116 AEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAF--AALKKY 155
>gi|224069282|ref|XP_002302945.1| predicted protein [Populus trichocarpa]
gi|222844671|gb|EEE82218.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 124/169 (73%), Gaps = 12/169 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
MA VDMSLDDIIK K ER RG+GRA RGRGRGRGP S + GRM+GA RRGPLS N
Sbjct: 1 MAATVDMSLDDIIK--KNRERGRGRGRASRGRGRGRGPVRSFNNGRMSGAVRRGPLSVNT 58
Query: 60 RPSSYTIAKSF-------RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
PS Y+IAK+ RR R+ PWQHDL EDS+RAAGI+G+EVGTKLYVSNL GVTN
Sbjct: 59 WPSKYSIAKASSKLWMPSRRVRSLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLDYGVTN 118
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
+DIRELF+E+G+LKRYA+H+DK+GR S S+ + S F LK Y
Sbjct: 119 EDIRELFAEVGDLKRYAVHYDKDGRSSGSAEVMYTRRSDAF--AALKKY 165
>gi|357460875|ref|XP_003600719.1| THO complex subunit [Medicago truncatula]
gi|355489767|gb|AES70970.1| THO complex subunit [Medicago truncatula]
Length = 291
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 115/175 (65%), Gaps = 20/175 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRG-------------RGRGPSGSVSGGRM 47
MA+ +D+SLDD IKSR R RG+G+A GRG GR S +GGR
Sbjct: 1 MASSLDISLDDRIKSRSNRGRGRGRGKALSGRGSGTLGGGRRTGAVNGRRTS---NGGR- 56
Query: 48 TGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
TGA RRGPL+ N R SSY IAKS RR + WQ DLFEDSLRAAGI G+E TKLYVSNL
Sbjct: 57 TGAVRRGPLNVNTRASSYAIAKSIRRPKTLAWQSDLFEDSLRAAGIQGVEADTKLYVSNL 116
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
GVTN+DIRELFSE+GELKRYA+H+DKNG P+ S+ + S F LK Y
Sbjct: 117 DRGVTNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAF--AALKRY 169
>gi|449456227|ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
Length = 286
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 10/180 (5%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
M T +DMSL+D+IK K+ RE+ + R R RGRG G S + G + G+ RRGPL NA
Sbjct: 1 MTTPLDMSLEDVIK---KNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINA 57
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
R S+Y+I K R +N WQHDLFEDSLRA+GISGI++GTKLYVSNL GVT +DI+ELF
Sbjct: 58 RASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELF 117
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY----MPEEVMHLQLLSDT 175
SEIG++KR+AIH+DKNGRPS S+ + S F LK Y + + M +++L D
Sbjct: 118 SEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAF--AALKRYNNVLLDGKPMKIEMLGDN 175
>gi|449532026|ref|XP_004172985.1| PREDICTED: THO complex subunit 4-like, partial [Cucumis sativus]
Length = 368
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 10/180 (5%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
M T +DMSL+D+IK K+ RE+ + R R RGRG G S + G + G+ RRGPL NA
Sbjct: 1 MTTPLDMSLEDVIK---KNNREKLRARGRARRGRGAGGSFNGGRGVVIGSVRRGPLGINA 57
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
R S+Y+I K R +N WQHDLFEDSLRA+GISGI++GTKLYVSNL GVT +DI+ELF
Sbjct: 58 RASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELF 117
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY----MPEEVMHLQLLSDT 175
SEIG++KR+AIH+DKNGRPS S+ + S F LK Y + + M +++L D
Sbjct: 118 SEIGDVKRFAIHYDKNGRPSGSAEVVYTRRSDAF--AALKRYNNVLLDGKPMKIEMLGDN 175
>gi|94466659|emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
Length = 275
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 111/157 (70%), Gaps = 9/157 (5%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NARPSS 63
+DM+LDD+IKSR+ + Q R RG GS GGR TGA R+ PL NARPS+
Sbjct: 4 LDMTLDDMIKSRRNT-----QRGGRGQGRARRGRGGSFRGGRTTGAPRKVPLGVNARPSA 58
Query: 64 YTIAKSFRRTRNFPWQHD--LFEDSLRAAGI-SGIEVGTKLYVSNLHPGVTNDDIRELFS 120
IAKSFRRT+N PWQ+ LFEDSLRAAGI SG+E GTK+YVSNL GVTN DIRELFS
Sbjct: 59 TRIAKSFRRTKNLPWQNGNGLFEDSLRAAGIPSGLESGTKVYVSNLDVGVTNSDIRELFS 118
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
EIGEL RYAIH+DKNGRPS ++ FA S + ++
Sbjct: 119 EIGELIRYAIHYDKNGRPSGAAEVVFARRSDAYQALK 155
>gi|147860765|emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
Length = 348
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 114/158 (72%), Gaps = 17/158 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAA-RRGPLSNA 59
MAT +DMSLDDIIK R SER RG+GRARRGRG GS +GGRM+G RRGPL
Sbjct: 42 MATSLDMSLDDIIK-RSNSERVRGRGRARRGRGP---IGGSFNGGRMSGIPPRRGPL--- 94
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+S RRT+ PWQHDLFEDSLRAAG+ G+E GTKLY+SNL GVTN+DIRELF
Sbjct: 95 --------RSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELF 145
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
SEIG++KRYA+H++KNGRPS S+ + S F V+
Sbjct: 146 SEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVK 183
>gi|30693141|ref|NP_198588.2| THO complex subunit 4 [Arabidopsis thaliana]
gi|37201990|gb|AAQ89610.1| At5g37720 [Arabidopsis thaliana]
gi|110735849|dbj|BAE99901.1| hypothetical protein [Arabidopsis thaliana]
gi|332006839|gb|AED94222.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 288
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 76/96 (79%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS+TI K RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 52 NARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRE 111
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
LFSEIGE++RYAIH+DKNGRPS ++ + S F
Sbjct: 112 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAF 147
>gi|145334661|ref|NP_001078676.1| THO complex subunit 4 [Arabidopsis thaliana]
gi|332006840|gb|AED94223.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 280
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 76/96 (79%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS+TI K RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 52 NARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRE 111
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
LFSEIGE++RYAIH+DKNGRPS ++ + S F
Sbjct: 112 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAF 147
>gi|9663025|emb|CAC01084.1| DIP2 protein [Arabidopsis thaliana]
Length = 288
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/96 (65%), Positives = 76/96 (79%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS+TI K RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 52 NARPSSFTINKPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRE 111
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
LFSEIGE++RYAIH+DKNGRPS ++ + S F
Sbjct: 112 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAF 147
>gi|297805348|ref|XP_002870558.1| hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp.
lyrata]
gi|297316394|gb|EFH46817.1| hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 76/96 (79%)
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
NARPSS +I K RR R+ PWQ LFED LRAAG+SG+EVGT+L+V+NL GVTN+DIRE
Sbjct: 53 NARPSSLSINKPVRRVRSLPWQSGLFEDGLRAAGVSGVEVGTRLHVTNLDQGVTNEDIRE 112
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
LFSEIGE++RYAIH+DKNGRPS ++ + S F
Sbjct: 113 LFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSDAF 148
>gi|18408471|ref|NP_564871.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334183676|ref|NP_001185329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15294238|gb|AAK95296.1|AF410310_1 At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|23506135|gb|AAN31079.1| At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|332196365|gb|AEE34486.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332196366|gb|AEE34487.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 295
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 105/155 (67%), Gaps = 10/155 (6%)
Query: 1 MATHVDMSLDDIIKSRKKSERER-----GQGRARR-GRGRGRGPSGSVSGGRMTGAARRG 54
M+ ++M+LD+I+K + KSER G+G +R+ GRGRG G R
Sbjct: 1 MSDALNMTLDEIVK-KSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGP 59
Query: 55 PLSNARPSS-YTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
N RPSS ++I K RR R+ PWQ+ DL+E++LRA G+SG+EVGT +Y++NL GVT
Sbjct: 60 LAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVT 119
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
N+DIREL++EIGELKRYAIH+DKNGRPS S+ +
Sbjct: 120 NEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVY 154
>gi|242095380|ref|XP_002438180.1| hypothetical protein SORBIDRAFT_10g009240 [Sorghum bicolor]
gi|241916403|gb|EER89547.1| hypothetical protein SORBIDRAFT_10g009240 [Sorghum bicolor]
Length = 307
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 103/157 (65%), Gaps = 13/157 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR----------RGRGRGRGPSGSVSGGRMTGA 50
MAT +D+ LDD+IKSR R RG+G+ RG RGRG +G+ G R G
Sbjct: 1 MATSLDVPLDDLIKSRNGRGRGRGRGQGGRGRGDGQRLARGSWRGRG-TGTFRG-RGLGV 58
Query: 51 ARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
R PL N R SS+ IAKSF + ++F W+HDLFEDS+ AAG+SGIE GTKLY+SNLH G
Sbjct: 59 PSRRPLGVNTRSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHYG 118
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
VT +DI+ELFSE+G LK A+H+D P+ S+ F
Sbjct: 119 VTREDIQELFSEMGHLKHCAVHYDSYRHPTGSAEVIF 155
>gi|9663023|emb|CAC01083.1| DIP1 protein [Arabidopsis thaliana]
Length = 295
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 105/155 (67%), Gaps = 10/155 (6%)
Query: 1 MATHVDMSLDDIIKSRKKSERER-----GQGRARR-GRGRGRGPSGSVSGGRMTGAARRG 54
M+ ++M+LD+I+K + KSER G+G +R+ GRGRG G R
Sbjct: 1 MSDALNMTLDEIVK-KSKSERSAAARSGGKGVSRKSGRGRGGPNGVVGGGRGGGPVRRGP 59
Query: 55 PLSNARPSS-YTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
N RPSS ++I K RR R+ PWQ+ DL+E++LRA G+SG+EVGT +Y++NL GVT
Sbjct: 60 LAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVT 119
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
N+DIREL++EIGELKRYAIH+DKNGRPS S+ +
Sbjct: 120 NEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVY 154
>gi|297841223|ref|XP_002888493.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
gi|297334334|gb|EFH64752.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 3/92 (3%)
Query: 58 NARPSS-YTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
NARPSS ++I K RR R+ PWQ+ DL E+SLRA G+SG+EVGT +Y++NL GVTN+D
Sbjct: 62 NARPSSSFSINKLARRKRSLPWQNQNDLLEESLRAVGVSGVEVGTTVYITNLDQGVTNED 121
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
IREL++EIGELKRYAIH+DKNGRPS S+ +
Sbjct: 122 IRELYTEIGELKRYAIHYDKNGRPSGSAEVVY 153
>gi|115467430|ref|NP_001057314.1| Os06g0256200 [Oryza sativa Japonica Group]
gi|52077258|dbj|BAD46300.1| putative DIP2 protein [Oryza sativa Japonica Group]
gi|113595354|dbj|BAF19228.1| Os06g0256200 [Oryza sativa Japonica Group]
gi|215692775|dbj|BAG88197.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635337|gb|EEE65469.1| hypothetical protein OsJ_20860 [Oryza sativa Japonica Group]
Length = 294
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 97/159 (61%), Gaps = 15/159 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR------------GRGRGRGPSGSVSGGRMT 48
MAT +DMSLDD+IK+ + S G GRGRG +G+ G R
Sbjct: 1 MATSLDMSLDDMIKNNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRG-AGTFRG-RGV 58
Query: 49 GAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
G R PL + R SSY IAKSF +T++ W+ DLFEDS+ AAG+S E TKLY+SNLH
Sbjct: 59 GVPSRRPLGVSTRSSSYAIAKSFNKTKDIVWRQDLFEDSMVAAGLSVTESSTKLYISNLH 118
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GVT +DI+ELFSE+G LK A+H+D N RP+ S+ F
Sbjct: 119 YGVTKEDIQELFSEMGHLKHCAVHYDNNRRPTGSAEVIF 157
>gi|357124609|ref|XP_003563990.1| PREDICTED: uncharacterized protein LOC100841511 [Brachypodium
distachyon]
Length = 311
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 96/166 (57%), Gaps = 20/166 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERE--------------------RGQGRARRGRGRGRGPSG 40
M T +DMSLDD+IK+R R RG G+ +G
Sbjct: 1 METSLDMSLDDMIKNRSGRGRGRTGVRGQRGGRGRGDGQNLGRGDGQRLGRGFGRGRGAG 60
Query: 41 SVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTK 100
+ G + A+R N R SSY IAKSF +T++F W HD FEDS+ AAG+SGIE GTK
Sbjct: 61 TFRGRGLRVPAQRPLGVNTRSSSYAIAKSFNKTKDFAWTHDRFEDSMVAAGLSGIESGTK 120
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
LY+SNLH GVT +D++ELFSE+G LK A+H+D N RP+ S+ F
Sbjct: 121 LYISNLHYGVTKEDLQELFSEMGHLKHCAVHYDNNRRPTGSAEVIF 166
>gi|195626448|gb|ACG35054.1| THO complex subunit 4 [Zea mays]
Length = 306
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 99/158 (62%), Gaps = 14/158 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR-----------RGRGRGRGPSGSVSGGRMTG 49
MAT +D+ LDD+IKSR RG+G+ RG RGRG R G
Sbjct: 1 MATPLDVPLDDLIKSRXGRGTGRGRGQGGGRGRGDGQRLARGSWRGRGTGNFRE--RGLG 58
Query: 50 AARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
+ R PL N SS+ IAKSF + ++F W+HDLFEDS+ AAG+SGIE GTKLY+SNLH
Sbjct: 59 VSSRRPLGVNTWSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHY 118
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GVT++D++ELFSE+G LK A+H+D P+ S+ F
Sbjct: 119 GVTSEDLQELFSEMGHLKHCAVHYDSYRHPTGSAEVIF 156
>gi|226505148|ref|NP_001146734.1| uncharacterized protein LOC100280336 [Zea mays]
gi|194704900|gb|ACF86534.1| unknown [Zea mays]
gi|219888533|gb|ACL54641.1| unknown [Zea mays]
gi|413944317|gb|AFW76966.1| THO complex subunit 4 [Zea mays]
Length = 306
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 99/158 (62%), Gaps = 14/158 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR-----------RGRGRGRGPSGSVSGGRMTG 49
MAT +D+ LDD+IKSR RG+G+ RG RGRG R G
Sbjct: 1 MATPLDVPLDDLIKSRAGRGTGRGRGQGGGRGRGDGQRLARGSWRGRGTGNFRE--RGLG 58
Query: 50 AARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHP 108
+ R PL N SS+ IAKSF + ++F W+HDLFEDS+ AAG+SGIE GTKLY+SNLH
Sbjct: 59 VSSRRPLGVNTWSSSFAIAKSFNKAKDFVWRHDLFEDSMVAAGLSGIESGTKLYISNLHY 118
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GVT++D++ELFSE+G LK A+H+D P+ S+ F
Sbjct: 119 GVTSEDLQELFSEMGHLKHCAVHYDSYRHPTGSAEVIF 156
>gi|12323574|gb|AAG51767.1|AC066691_7 RNA and export factor binding protein, putative; 38196-36208
[Arabidopsis thaliana]
Length = 282
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 94/148 (63%), Gaps = 9/148 (6%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++M+LD+I+K KS+ ER G+G R SG GG R
Sbjct: 1 MSDALNMTLDEIVK---KSKSERSAAARSGGKGVSR-KSGRGRGGPNGVVGGGRGGGPVR 56
Query: 61 PSSYTIAKSFRRTRNFPWQH--DLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
+A RR R+ PWQ+ DL+E++LRA G+SG+EVGT +Y++NL GVTN+DIREL
Sbjct: 57 RGPLALA---RRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIREL 113
Query: 119 FSEIGELKRYAIHFDKNGRPSVSSVACF 146
++EIGELKRYAIH+DKNGRPS S+ +
Sbjct: 114 YAEIGELKRYAIHYDKNGRPSGSAEVVY 141
>gi|357460877|ref|XP_003600720.1| THO complex subunit [Medicago truncatula]
gi|355489768|gb|AES70971.1| THO complex subunit [Medicago truncatula]
Length = 218
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S RR + WQ DLFEDSLRAAGI G+E TKLYVSNL GVTN+DIRELFSE+GELKRY
Sbjct: 6 SIRRPKTLAWQSDLFEDSLRAAGIQGVEADTKLYVSNLDRGVTNEDIRELFSELGELKRY 65
Query: 129 AIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
A+H+DKNG P+ S+ + S F LK Y
Sbjct: 66 AVHYDKNGHPTGSAEVVYNRRSDAF--AALKRY 96
>gi|9757981|dbj|BAB08317.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 69/92 (75%)
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
S IA RR R+ PWQ LFED LRAAG SG+EVGT+L+V+NL GVTN+DIRELFSE
Sbjct: 98 SFIIIALPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 157
Query: 122 IGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
IGE++RYAIH+DKNGRPS ++ + S F
Sbjct: 158 IGEVERYAIHYDKNGRPSGTAEVVYPRRSDAF 189
>gi|413922290|gb|AFW62222.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 184
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 83/113 (73%), Gaps = 7/113 (6%)
Query: 35 GRGPSGSVSGGRMTGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS 93
GRG G V GR +G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A S
Sbjct: 21 GRG--GHVLRGR-SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---S 74
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GIE GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+ ++ F
Sbjct: 75 GIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVF 127
>gi|46982390|gb|AAT08172.1| Hin19 [Nicotiana tabacum]
Length = 219
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
Query: 68 KSFRRTRNFPWQHD--LFEDSLRAAGIS-GIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
+S RRT+N PWQ+ LFEDSLRAAGIS G+E GTK+YVSNL GVTN DIRELFSEIGE
Sbjct: 6 QSSRRTKNLPWQNGNGLFEDSLRAAGISSGLESGTKVYVSNLDVGVTNSDIRELFSEIGE 65
Query: 125 LKRYAIHFDKNGRPSVSSVACFATFSPLF 153
L RYAIH+DKNGRPS ++ FA S +
Sbjct: 66 LIRYAIHYDKNGRPSGAAEVVFARRSDAY 94
>gi|226531320|ref|NP_001146561.1| hypothetical protein [Zea mays]
gi|219887809|gb|ACL54279.1| unknown [Zea mays]
gi|413922291|gb|AFW62223.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 269
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 11/145 (7%)
Query: 37 GPSGSVSGGRMTGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI 95
G G V GR +G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGI
Sbjct: 21 GRGGHVLRGR-SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGI 76
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+ ++ F S
Sbjct: 77 ETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAI-- 134
Query: 156 VQLKWY----MPEEVMHLQLLSDTI 176
LK Y + + M ++++ + +
Sbjct: 135 AALKRYNNVLLDGKAMKIEVIGNDL 159
>gi|413922292|gb|AFW62224.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
gi|413922293|gb|AFW62225.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 272
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 11/145 (7%)
Query: 37 GPSGSVSGGRMTGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI 95
G G V GR +G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGI
Sbjct: 21 GRGGHVLRGR-SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGI 76
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+ ++ F S
Sbjct: 77 ETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVFTRRSDAI-- 134
Query: 156 VQLKWY----MPEEVMHLQLLSDTI 176
LK Y + + M ++++ + +
Sbjct: 135 AALKRYNNVLLDGKAMKIEVIGNDL 159
>gi|115476498|ref|NP_001061845.1| Os08g0427900 [Oryza sativa Japonica Group]
gi|38175495|dbj|BAD01191.1| putative transcriptional coactivator(DIP2) [Oryza sativa Japonica
Group]
gi|38175772|dbj|BAD01466.1| putative transcriptional coactivator(DIP2) [Oryza sativa Japonica
Group]
gi|113623814|dbj|BAF23759.1| Os08g0427900 [Oryza sativa Japonica Group]
Length = 286
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 75/102 (73%), Gaps = 6/102 (5%)
Query: 48 TGAARRGPLS---NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVS 104
+G RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGIE GTKLY+S
Sbjct: 39 SGMPPRGPLGLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYIS 95
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
NL GV+N+DI+ELFSE+G LKR+A+HFD GRP+ ++ F
Sbjct: 96 NLDYGVSNEDIKELFSEVGHLKRFAVHFDGYGRPNGTAEVVF 137
>gi|294464863|gb|ADE77937.1| unknown [Picea sitchensis]
Length = 274
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 95/149 (63%), Gaps = 3/149 (2%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG--PLSN 58
MA +DMSL+D+IK+ K+ RG+G +R G G G + SN
Sbjct: 1 MANSLDMSLEDLIKNNKQFSGGRGRGGSRGRGRGGGRGGSRGGDGVGRGRRGQQLRVNSN 60
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS-GIEVGTKLYVSNLHPGVTNDDIRE 117
ARPS Y+IAKSF R + WQHD+FEDS+ A G+ G+E GTKLYVSNL GV+N DI+E
Sbjct: 61 ARPSPYSIAKSFNRAKGVVWQHDMFEDSMAAIGMPIGLETGTKLYVSNLDSGVSNQDIKE 120
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACF 146
LF+E+G+LK A+H+D++GR + ++ F
Sbjct: 121 LFTEVGDLKSCALHYDRSGRSNGTAEVVF 149
>gi|242081501|ref|XP_002445519.1| hypothetical protein SORBIDRAFT_07g020860 [Sorghum bicolor]
gi|241941869|gb|EES15014.1| hypothetical protein SORBIDRAFT_07g020860 [Sorghum bicolor]
Length = 272
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 5/111 (4%)
Query: 37 GPSGSVSGGRMTGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI 95
G G V GR +G RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A SGI
Sbjct: 21 GRGGHVLRGR-SGLPPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---SGI 76
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
E GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+ ++ F
Sbjct: 77 ETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPNGTAEVVF 127
>gi|413922289|gb|AFW62221.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 133
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 80/106 (75%), Gaps = 7/106 (6%)
Query: 35 GRGPSGSVSGGRMTGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS 93
GRG G V GR +G A RGPL N+RPS+ TIAKSF RT++ W+ DLF DS+ A S
Sbjct: 21 GRG--GHVLRGR-SGLAPRGPLGVNSRPSARTIAKSFSRTKDMTWRPDLFSDSMAA---S 74
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
GIE GTKLY+SNL GV+N+DI+ELFSE+G LKR+A+H+D GRP+
Sbjct: 75 GIETGTKLYISNLDYGVSNEDIKELFSEVGHLKRFAVHYDGYGRPN 120
>gi|40644804|emb|CAE53910.1| putative DIP2 protein [Triticum aestivum]
Length = 259
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 55 PLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTND 113
PL N R SSY IAKSF +T++F W HD F DS+ AAG+ GIE GTKLYVSNLH GVT +
Sbjct: 70 PLGVNTRSSSYAIAKSFNKTKDFAWTHDRFGDSMVAAGLPGIETGTKLYVSNLHYGVTKE 129
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
D++ELFSE+G LK +H+D N P+ S+ F
Sbjct: 130 DLQELFSEMGHLKNCIVHYDNNRHPTGSAEVIF 162
>gi|224059518|ref|XP_002299886.1| predicted protein [Populus trichocarpa]
gi|222847144|gb|EEE84691.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 94/149 (63%), Gaps = 23/149 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRAR-RGRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
M++ +DMSLDDIIK+ KK G A RGRGRG PSG+ G ARR P A
Sbjct: 1 MSSALDMSLDDIIKNSKKP------GSANFRGRGRGH-PSGA-------GPARRFPNRAA 46
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
R + YT AK+ T WQHD+F D ++ S +E G KLYVSNL GV+N+DI+EL
Sbjct: 47 NRSAPYTAAKAPEST----WQHDMFRD--QSGRTSSLE-GAKLYVSNLDYGVSNEDIKEL 99
Query: 119 FSEIGELKRYAIHFDKNGRPSVSSVACFA 147
F E+GELKRY+IH+D++GR ++ FA
Sbjct: 100 FLEVGELKRYSIHYDRSGRSKGTAEVVFA 128
>gi|255581121|ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 247
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 28/167 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +DMSLDDIIKS KK G G +R GRGR GP G RR N R
Sbjct: 1 MSSALDMSLDDIIKSNKKP----GSGNSR-GRGRSSGP----------GPTRR---FNNR 42
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG----------ISGIEVGTKLYVSNLHPGV 110
++ + + WQHD+F D SGIE GTKLY+SNL GV
Sbjct: 43 GTNRAAPYAAAKAPESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGV 102
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
+N+DI+ELFSE+G+LKRY+IH+D++GR ++ F+ + V+
Sbjct: 103 SNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVK 149
>gi|356539036|ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 247
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 28/156 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
M+ +DMSLDDIIK+ KKS +GR R PSGS G +RR P A
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIR--------PSGS-------GPSRRFPNRAAN 45
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPGVT 111
R + Y AK+ T WQHDL+ D AA + IE GTKLY+SNL GV+
Sbjct: 46 RAAPYATAKAPEAT----WQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVS 101
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+DDI+ELF+E+G+LKR+A+H+D++GR ++ F+
Sbjct: 102 SDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFS 137
>gi|357147822|ref|XP_003574500.1| PREDICTED: uncharacterized protein LOC100821328 [Brachypodium
distachyon]
Length = 270
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 4/100 (4%)
Query: 48 TGAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
+G RGPL NARPS+ IAKSF RT++ W+ DLF DS+ A SGIE GTKLY+SNL
Sbjct: 31 SGLPPRGPLGINARPSARIIAKSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNL 87
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
V+N+DI+ELFSE+G LKR+A+HFD G + ++ F
Sbjct: 88 DYRVSNEDIKELFSEVGHLKRFAVHFDGYGHQNGTAEVVF 127
>gi|125554793|gb|EAZ00399.1| hypothetical protein OsI_22414 [Oryza sativa Indica Group]
Length = 272
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 87/146 (59%), Gaps = 11/146 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MAT +DMSLDD+IK+ + S GRGRG G S GR GA
Sbjct: 1 MATSLDMSLDDMIKNNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRGAG--------- 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
++ SF +T++ W+ DLFEDS+ AAG+S E TKLY+SNLH GVT +DI+ELFS
Sbjct: 52 --TFRGRGSFNKTKDIVWRQDLFEDSMVAAGLSVTESSTKLYISNLHYGVTKEDIQELFS 109
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACF 146
E+G LK A+H+D N RP+ S+ F
Sbjct: 110 EMGHLKHCAVHYDNNRRPTGSAEVIF 135
>gi|356542471|ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 247
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 26/155 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DMSLDDIIK+ KKS +GR R PSGS G RR P R
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTR--------PSGS-------GPTRRLP---NR 42
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDS-LRAAG-------ISGIEVGTKLYVSNLHPGVTN 112
++ + + WQHDL+ D + AAG + IE GTKLY+SNL GV+N
Sbjct: 43 AANRAAPYAPAKAPEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSN 102
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
DDI+ELF+E+G+LKR+A+H+D++GR ++ F+
Sbjct: 103 DDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFS 137
>gi|297793551|ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata]
gi|297310495|gb|EFH40919.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 85/150 (56%), Gaps = 22/150 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+T +DMSLDD+I +KS +G A RG G GP+ R R+ + R
Sbjct: 1 MSTGLDMSLDDMIAKNRKS-----RGGAGPARGTGPGPT------RRNNPNRK----STR 45
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFED---SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
+ Y AK+ T W HD+F D +GIE GTKLY+SNL GV N+DI+E
Sbjct: 46 SAPYQSAKAPEST----WGHDMFSDRSEDFPPRSSAGIETGTKLYISNLDYGVMNEDIKE 101
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
LF+E+GELKRY +HFD++GR ++ ++
Sbjct: 102 LFAEVGELKRYTVHFDRSGRSKGTAEVVYS 131
>gi|168020731|ref|XP_001762896.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686005|gb|EDQ72397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 23/159 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGR--GPSGSVSGG----RMTGAARRG 54
M + +DMSLDD+IKS K + G R G + + G RM+G ARR
Sbjct: 1 MTSALDMSLDDLIKSNKTATHGGRGGGRGAAAPVPRRVGATAAAEEGYPDSRMSGPARR- 59
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQHDLFED-------SLRAAGISGIEVGTKLYVSNLH 107
T A RR + PWQHD++E+ S+R G IE GTKLY+SNL
Sbjct: 60 --------QVTRATPVRRAMDSPWQHDMYENFAPAPSASVRGTG-GNIETGTKLYISNLD 110
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GV+NDDI+ELF E+G+LKR +I++D++GR ++ F
Sbjct: 111 HGVSNDDIKELFGEVGDLKRCSINYDRSGRSKGTAEVVF 149
>gi|449462627|ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 83/152 (54%), Gaps = 22/152 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK+ KKS RAR G G GPS R G R P S ++
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSS--NFRARGGASSGPGPSRRF---RNRGLNRATPYSTSK 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRA-----AGISGIEVGTKLYVSNLHPGVTNDDI 115
W HD+F D A S IE GTKLYVSNL GV+N+DI
Sbjct: 56 APETA------------WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDI 103
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ELFSE+G++KRY+I++DK+GR ++ F+
Sbjct: 104 KELFSEVGDVKRYSINYDKSGRSKGTAEIVFS 135
>gi|449512820|ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 79/142 (55%), Gaps = 22/142 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK+ KKS RAR G G GPS R G R P S ++
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSS--NFRARGGASSGPGPSRRF---RNRGLNRATPYSTSK 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRA-----AGISGIEVGTKLYVSNLHPGVTNDDI 115
W HD+F D A S IE GTKLYVSNL GV+N+DI
Sbjct: 56 APETA------------WSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDI 103
Query: 116 RELFSEIGELKRYAIHFDKNGR 137
+ELFSE+G++KRY+I++DK+GR
Sbjct: 104 KELFSEVGDVKRYSINYDKSGR 125
>gi|413922288|gb|AFW62220.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
Length = 226
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG 123
+ I +SF RT++ W+ DLF DS+ A SGIE GTKLY+SNL GV+N+DI+ELFSE+G
Sbjct: 2 FGIFQSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNLDYGVSNEDIKELFSEVG 58
Query: 124 ELKRYAIHFDKNGRPSVSSVACF 146
LKR+A+H+D GRP+ ++ F
Sbjct: 59 HLKRFAVHYDGYGRPNGTAEVVF 81
>gi|218201182|gb|EEC83609.1| hypothetical protein OsI_29305 [Oryza sativa Indica Group]
gi|222640591|gb|EEE68723.1| hypothetical protein OsJ_27390 [Oryza sativa Japonica Group]
Length = 274
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
Query: 48 TGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
+G RGPL SF RT++ W+ DLF DS+ A SGIE GTKLY+SNL
Sbjct: 39 SGMPPRGPLG---------LGSFSRTKDMTWRPDLFSDSMAA---SGIETGTKLYISNLD 86
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GV+N+DI+ELFSE+G LKR+A+HFD GRP+ ++ F
Sbjct: 87 YGVSNEDIKELFSEVGHLKRFAVHFDGYGRPNGTAEVVF 125
>gi|356550261|ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
Length = 243
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 23/152 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DM+L+DIIK+ KKS RGRGR GP G ARR P R
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLAN-----TRGRGRASGP----------GPARRLP---NR 42
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG-----IEVGTKLYVSNLHPGVTNDDI 115
++ + + W+HD++ + AA G IE GTKLY+SNL GV+NDDI
Sbjct: 43 AANRAAPYAAAKAPETAWKHDMYANQPVAAAYPGGRASSIETGTKLYISNLDYGVSNDDI 102
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ELF E+G++KR+ +H+D++GR ++ F+
Sbjct: 103 KELFLEVGDVKRHTVHYDRSGRSKGTAEVVFS 134
>gi|225435024|ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product [Vitis vinifera]
Length = 243
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 24/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
M+ +DMSLDD+IK+ K+S RG G ARR P A
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGS--------------GPGPARRLPNRGAN 46
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRA----AG-ISGIEVGTKLYVSNLHPGVTNDD 114
R + Y+++K+ T WQHD+F D A AG S IE GTKLY+SNL GV+N+D
Sbjct: 47 RITPYSVSKAPETT----WQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNED 102
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELFSE+G+LKRY+IH+D++GR ++ F+
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFS 135
>gi|147843918|emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 87/153 (56%), Gaps = 24/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
M+ +DMSLDD+IK+ K+S RG G ARR P A
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGS--------------GPGPARRLPNRGAN 46
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSL-----RAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y+++K+ T WQHD+F D +A S IE GTKLY+SNL GV+N+D
Sbjct: 47 RITPYSVSKAPETT----WQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNED 102
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELFSE+G+LKRY+IH+D++GR ++ F+
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFS 135
>gi|186532595|ref|NP_001119461.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009874|gb|AED97257.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 211
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 23/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I +KS RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELF+E+GELKRY +HFD++GR ++ ++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYS 136
>gi|9757916|dbj|BAB08363.1| RNA and export factor binding protein 2-I-like protein [Arabidopsis
thaliana]
Length = 239
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 23/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I +KS RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELF+E+GELKRY +HFD++GR ++ ++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYS 136
>gi|334188502|ref|NP_001190572.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009875|gb|AED97258.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 245
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 23/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I +KS RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELF+E+GELKRY +HFD++GR ++ ++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYS 136
>gi|30697310|ref|NP_851229.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|22531190|gb|AAM97099.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
gi|23198018|gb|AAN15536.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
gi|332009871|gb|AED97254.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 244
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 23/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I +KS RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+SNL GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELF+E+GELKRY +HFD++GR ++ ++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYS 136
>gi|449450684|ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
gi|449508143|ref|XP_004163231.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 84/152 (55%), Gaps = 24/152 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK+ KKS +GR R G RR P A
Sbjct: 1 MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG---------------SGPGPVRRFPNRAAN 45
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDS-----LRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
+ Y+ K+ T WQHD+F D ++ S I+ GTKLY+SNL GV+N+DI
Sbjct: 46 RTPYSAPKAPETT----WQHDMFADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDI 101
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ELFSE+G++KR+ IH+DK+GR ++ F+
Sbjct: 102 KELFSEVGDMKRHGIHYDKSGRSKGTAEVVFS 133
>gi|194703592|gb|ACF85880.1| unknown [Zea mays]
gi|413956152|gb|AFW88801.1| THO complex subunit 4 isoform 1 [Zea mays]
gi|413956153|gb|AFW88802.1| THO complex subunit 4 isoform 2 [Zea mays]
Length = 254
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 18/164 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKS------NPSSRGARRSRGVSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLF-----EDSLRAAGISGIEVGTKLYVSNLHPGVTND 113
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGGRVSALETGAKLYISNLDFGVSNE 109
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
DI+ELFSE+G+LKR++I++D++GR ++ FA S V+
Sbjct: 110 DIKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVK 153
>gi|167999562|ref|XP_001752486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696386|gb|EDQ82725.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 22/152 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M + +DMSLDD+IK+ K A RG G G G G A+RRG + A
Sbjct: 1 MTSALDMSLDDLIKTNKT---------ATRGGRGGGGGGGGGGGRGAAPASRRGGATAA- 50
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAA-----GISG-IEVGTKLYVSNLHPGVTNDD 114
A RR + WQHD++E+ L AA G++G IE GTKLY+SNL GV+NDD
Sbjct: 51 ------ADGVRRDPDSTWQHDMYENFLPAAPSSGRGVTGGIETGTKLYISNLDYGVSNDD 104
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
I+ELF E+G+LKR +I++D++GR ++ F
Sbjct: 105 IKELFGEVGDLKRCSINYDRSGRSKGTAEVVF 136
>gi|223944243|gb|ACN26205.1| unknown [Zea mays]
gi|413956151|gb|AFW88800.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 244
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKSNP------SSRGARRSRGVSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGVTND 113
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGGRVSALETGAKLYISNLDFGVSNE 109
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
DI+ELFSE+G+LKR++I++D++GR ++ FA
Sbjct: 110 DIKELFSELGDLKRFSINYDRSGRSKGTAEVVFA 143
>gi|42573738|ref|NP_974965.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009873|gb|AED97256.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 242
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 21/151 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+T +DMSLDD+I +KS RG G GP+ G G RR N
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRR----NNP 43
Query: 61 PSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
T + ++ W HD+F ED +GIE GTKLY+SNL GV N+DI+
Sbjct: 44 NRKSTRSAPYQSAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIK 103
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
ELF+E+GELKRY +HFD++GR ++ ++
Sbjct: 104 ELFAEVGELKRYTVHFDRSGRSKGTAEVVYS 134
>gi|21555029|gb|AAM63758.1| transcriptional coactivator-like protein [Arabidopsis thaliana]
Length = 243
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 84/153 (54%), Gaps = 23/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS--N 58
M+T +DMSLDD+I +KS RG G GP+ G G RR + +
Sbjct: 1 MSTGLDMSLDDMIAKNRKS------------RG-GAGPARGTGSGSGPGPTRRNNPNRKS 47
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y AK+ T W HD+F ED +GIE GTKLY+S L GV N+D
Sbjct: 48 TRSAPYQSAKAPEST----WGHDMFSDRSEDHRSGRSSAGIETGTKLYISXLDYGVMNED 103
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELF+E+GELKRY +HFD++GR ++ ++
Sbjct: 104 IKELFAEVGELKRYTVHFDRSGRSKGTAEVVYS 136
>gi|226498374|ref|NP_001140668.1| uncharacterized protein LOC100272743 [Zea mays]
gi|194700496|gb|ACF84332.1| unknown [Zea mays]
gi|413956154|gb|AFW88803.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 224
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 86/154 (55%), Gaps = 18/154 (11%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKSNP------SSRGARRSRGVSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE-----DSLRAAGISGIEVGTKLYVSNLHPGVTND 113
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGGRVSALETGAKLYISNLDFGVSNE 109
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
DI+ELFSE+G+LKR++I++D++GR ++ FA
Sbjct: 110 DIKELFSELGDLKRFSINYDRSGRSKGTAEVVFA 143
>gi|296086266|emb|CBI31707.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 18/136 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M +DMSLD+II+++KKS G G SG A R G R
Sbjct: 1 MPDPLDMSLDEIIRNKKKSA------------GVSSNVRGIGSGPGPGPARRFGNRELLR 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ Y++A F+ W+ ++F G+S +E GTKLY+SNL GV+NDDI+ELFS
Sbjct: 49 TTPYSVAPVFQ-VLEAAWKQEVF-----TGGVSTMETGTKLYISNLEYGVSNDDIKELFS 102
Query: 121 EIGELKRYAIHFDKNG 136
E+GELK+Y+IH+DK+G
Sbjct: 103 EVGELKQYSIHYDKSG 118
>gi|226503573|ref|NP_001145994.1| uncharacterized protein LOC100279524 [Zea mays]
gi|195619398|gb|ACG31529.1| THO complex subunit 4 [Zea mays]
gi|195624712|gb|ACG34186.1| THO complex subunit 4 [Zea mays]
gi|219885251|gb|ACL53000.1| unknown [Zea mays]
gi|414866140|tpg|DAA44697.1| TPA: THO complex subunit 4 isoform 1 [Zea mays]
gi|414866141|tpg|DAA44698.1| TPA: THO complex subunit 4 isoform 2 [Zea mays]
Length = 253
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG-PLSNA 59
MA +DM+LDDIIK+ KKS G R R RG S G G RR +
Sbjct: 1 MAETLDMTLDDIIKNNKKSNPSSGGAR------RSRGGSAPGGGSGGVGPTRRSFKRAGN 54
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
R + Y K+ + WQHD++ +S +E GTKLY+SNL GV+NDDI
Sbjct: 55 RQAPYQPPKA----PDAAWQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNDDI 110
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
+ELFSE+G+LKR++I +D++GR ++ FA S V+
Sbjct: 111 KELFSELGDLKRFSIIYDRSGRSKGTAEVVFARRSDAVAAVK 152
>gi|195637864|gb|ACG38400.1| THO complex subunit 4 [Zea mays]
Length = 253
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 17/163 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA- 59
MA +DM+LDDIIK+ KKS + RG R RG S G G RR P A
Sbjct: 1 MAETLDMTLDDIIKNNKKS------NPSSRGARRSRGGSAPGGGTGGVGPTRR-PFKRAG 53
Query: 60 -RPSSYTIAKSFRRTRNFPWQHDLFE----DSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
R + Y K+ + WQHD++ +S +E G KLY+SNL GV+N+D
Sbjct: 54 NRQAPYQPPKA----PDAAWQHDMYPAVAAXGGGGGRVSALETGAKLYISNLDFGVSNED 109
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
I+ELFSE+G+LKR++I++D++GR ++ FA S V+
Sbjct: 110 IKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSDAVAAVK 152
>gi|47223958|emb|CAG06135.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Query: 1 MATHVDMSLDDIIKSRKKSERER-GQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
MA V+MSLDDIIK KK+ R R G A GR GR PS RR
Sbjct: 1 MADKVNMSLDDIIKLNKKAGRGREGGASAPAGRSSGRRPS-------RPARDRRNNFQRE 53
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
+ YT + R P WQHD+FED A E KL VSNL GV++ D+RE
Sbjct: 54 GDNRYT---PYTRPSELPDKWQHDMFEDHEDGAPAGEAEGSAKLLVSNLDFGVSDSDLRE 110
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACF 146
LF+E G LK +IH+D++GR ++ F
Sbjct: 111 LFAEFGPLKEASIHYDRSGRSKGTADVHF 139
>gi|410917420|ref|XP_003972184.1| PREDICTED: RNA and export factor-binding protein 2-like [Takifugu
rubripes]
Length = 232
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAAR--RGPLSN 58
MA V+MSLDDIIK KK+ R G +R P+G SG R + AR R
Sbjct: 1 MADKVNMSLDDIIKLNKKAGSGREGGSSR--------PTGRSSGRRPSRPARDRRDNFQR 52
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
R YT + R P WQHDLFE+ S E KL VSNL GV++ D+R
Sbjct: 53 ERNDRYT---PYTRPSELPDKWQHDLFEEHANGPQSSEAEGSAKLLVSNLDFGVSDSDLR 109
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
ELF+E G LK ++H+D++GR
Sbjct: 110 ELFAEFGPLKEASVHYDRSGR 130
>gi|194899179|ref|XP_001979138.1| GG10124 [Drosophila erecta]
gi|190650841|gb|EDV48096.1| GG10124 [Drosophila erecta]
Length = 266
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRTAGGARRGGASAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+A +GP + AK R N W+HD+++ R A + G T+L V NL G
Sbjct: 61 SALKGPRGGVAGGAVQKAKFPRGDVNSAWKHDMYDGPKRGA-VGGGSGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGR 137
V+N DI+ELF++ G +K+ A+H+D++GR
Sbjct: 120 VSNTDIKELFNDFGPMKKAAVHYDRSGR 147
>gi|302753882|ref|XP_002960365.1| hypothetical protein SELMODRAFT_74080 [Selaginella moellendorffii]
gi|300171304|gb|EFJ37904.1| hypothetical protein SELMODRAFT_74080 [Selaginella moellendorffii]
Length = 122
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 78 WQHDLFEDSLRAAGI----SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD+FED G GIE GTKL++SNL GV+ DDI+ELFSE G+LKR A+HFD
Sbjct: 1 WQHDMFEDGFVGGGARTKPVGIETGTKLFISNLDHGVSTDDIKELFSEQGDLKRCAVHFD 60
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 61 RSGRSKCTADVVFA 74
>gi|302767862|ref|XP_002967351.1| hypothetical protein SELMODRAFT_87004 [Selaginella moellendorffii]
gi|300165342|gb|EFJ31950.1| hypothetical protein SELMODRAFT_87004 [Selaginella moellendorffii]
Length = 238
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 78 WQHDLFEDSLRAAGI----SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD+FED G GIE GTKL++SNL GV+ DDI+ELFSE G+LKR A+HFD
Sbjct: 73 WQHDMFEDGFVGGGARTKPVGIETGTKLFISNLDHGVSTDDIKELFSEQGDLKRCAVHFD 132
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 133 RSGRSKCTADVVFA 146
>gi|195498869|ref|XP_002096710.1| aly [Drosophila yakuba]
gi|194182811|gb|EDW96422.1| aly [Drosophila yakuba]
Length = 266
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPS-----GSVSGG--RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R S G+ +GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRTASNARRGGASAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+A +GP + AK R N W+HD+++ R A + G T+L V NL G
Sbjct: 61 SALKGPRGGVAGGAVQKAKFPRGDVNSAWKHDMYDGPKRGA-VGGGSGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGR 137
V+N DI+ELF++ G +K+ A+H+D++GR
Sbjct: 120 VSNTDIKELFNDFGPMKKAAVHYDRSGR 147
>gi|21356157|ref|NP_651968.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|5679350|gb|AAD46930.1|AF172637_1 LD24793p [Drosophila melanogaster]
gi|7298863|gb|AAF54070.1| RNA and export factor binding protein 1 [Drosophila melanogaster]
gi|220953584|gb|ACL89335.1| Aly-PA [synthetic construct]
Length = 266
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 15/193 (7%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTGGQQRFAGGARRGGANAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+ +GP + AK R N W+HD+++ R A + G T+L V NL G
Sbjct: 61 SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGA-VGGGSGPTRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE--VM 167
V+N DI+ELF++ G +K+ A+H+D++GR ++ F + ++ +P + M
Sbjct: 120 VSNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPM 179
Query: 168 HLQL-LSDTIMYC 179
+QL +SD +
Sbjct: 180 TIQLAVSDVAVLT 192
>gi|51490665|emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 84/153 (54%), Gaps = 27/153 (17%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA-RPSS 63
+DMSLDD+IK + K++ + RG G GP ARR P +A R +
Sbjct: 6 LDMSLDDLIK-KNKTDTGGKRRGRGRGGASGPGP------------ARRFPNRSANRAAP 52
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRA---------AGISGIEVGTKLYVSNLHPGVTNDD 114
Y+ AK+ W HD+F + +A S I GTKLY+SNL GV+N+D
Sbjct: 53 YSTAKAPEAA----WNHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNED 108
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ELFSE G+LKRYAIH+D++GR ++ F+
Sbjct: 109 IKELFSEAGDLKRYAIHYDRSGRSKGTAEVVFS 141
>gi|48474967|sp|Q9JJW6.1|REFP2_MOUSE RecName: Full=RNA and export factor-binding protein 2
gi|7159945|emb|CAB76384.1| RNA and export factor binding protein 2-I [Mus musculus]
Length = 218
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGR 137
F+E G LK+ A+ +D++GR
Sbjct: 95 FAEFGTLKKAAVDYDRSGR 113
>gi|300085579|gb|ADJ67482.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGR 137
F+E G LK+ A+ +D++GR
Sbjct: 95 FAEFGTLKKAAVDYDRSGR 113
>gi|148238335|ref|NP_062357.3| RNA and export factor-binding protein 2 [Mus musculus]
gi|148707130|gb|EDL39077.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 88/180 (48%), Gaps = 30/180 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE--VMHLQLLSDTI 176
F+E G LK+ A+ +D++GR ++ F + ++ +P + M +QL++ I
Sbjct: 95 FAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVTSQI 154
>gi|334187381|ref|NP_001190207.1| THO complex subunit 4 [Arabidopsis thaliana]
gi|7413642|emb|CAB85990.1| putative protein [Arabidopsis thaliana]
gi|332003103|gb|AED90486.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 290
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 15/159 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DMSLDDIIKS +K RG+G G G + G A R AR
Sbjct: 1 MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANR---VGAR 57
Query: 61 PSSYTIAKSFRRTRNFPWQHDLF--EDSLRAA----------GISGIEVGTKLYVSNLHP 108
+ Y+ ++ + WQ+D+F + S+ AA G S IE GTKLY+SNL
Sbjct: 58 TAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDY 117
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
GV+N+DI+ELFSE+G+LKRY IH+D++GR ++ F+
Sbjct: 118 GVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFS 156
>gi|112983092|ref|NP_001037596.1| ALY [Bombyx mori]
gi|95115188|gb|ABF55960.1| ALY [Bombyx mori]
Length = 254
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----RRGRGRGRGPSGSVSGGRMTGAARRGP 55
M ++M+LDDIIK+ KK+ G GR R GRG G G + SGG G R G
Sbjct: 1 MVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG- 59
Query: 56 LSNARPSSYTIAKSFRRTR---NFPWQHDLFED-----SLRAAGISGIEVG-TKLYVSNL 106
I KS +R N W+HD+F D R +G I G TKL VSNL
Sbjct: 60 ----------ITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--ITTGPTKLLVSNL 107
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE- 165
GV++ DI+ELFSE G LK ++H+D++GR ++ F + ++ +P +
Sbjct: 108 DFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDG 167
Query: 166 -VMHLQLLSDTIMYCWMENR 184
M++QL + I E R
Sbjct: 168 RAMNIQLATSEINTLRPEAR 187
>gi|68534069|gb|AAH99405.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGR 137
F+E G LK+ A+ +D++GR
Sbjct: 95 FAEFGTLKKAAVDYDRSGR 113
>gi|26339222|dbj|BAC33282.1| unnamed protein product [Mus musculus]
Length = 218
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 1 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 42
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 43 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 94
Query: 119 FSEIGELKRYAIHFDKNGR 137
F+E G LK+ A+ +D++GR
Sbjct: 95 FAEFGTLKKAAVDYDRSGR 113
>gi|30679669|ref|NP_195873.2| THO complex subunit 4 [Arabidopsis thaliana]
gi|22655123|gb|AAM98152.1| putative protein [Arabidopsis thaliana]
gi|30023796|gb|AAP13431.1| At5g02530 [Arabidopsis thaliana]
gi|332003102|gb|AED90485.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 292
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 15/159 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DMSLDDIIKS +K RG+G G G + G A R AR
Sbjct: 1 MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANR---VGAR 57
Query: 61 PSSYTIAKSFRRTRNFPWQHDLF--EDSLRAA----------GISGIEVGTKLYVSNLHP 108
+ Y+ ++ + WQ+D+F + S+ AA G S IE GTKLY+SNL
Sbjct: 58 TAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDY 117
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
GV+N+DI+ELFSE+G+LKRY IH+D++GR ++ F+
Sbjct: 118 GVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFS 156
>gi|168026155|ref|XP_001765598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683236|gb|EDQ69648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 37/160 (23%)
Query: 1 MATHVDMSLDDIIKSRKKSERE----------RGQGRARRGRGRGRGPSGSVSGGRMTGA 50
M + +DMSLDD+IK+ K++ + G ARR GR
Sbjct: 1 MTSALDMSLDDLIKTNKRATAAAGAAVGYPGGKTSGPARRQVGR---------------- 44
Query: 51 ARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGI----SGIEVGTKLYVSNL 106
+ ARP+ Y AK+ + + H L+ D+ AG GIE GTKLY+SNL
Sbjct: 45 ------AVARPTPYASAKASKAASPYSLIH-LYADNFLPAGGRGMGKGIETGTKLYISNL 97
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GV+NDDI+ELFSE+G+LKR +I++D++GR ++ F
Sbjct: 98 DYGVSNDDIKELFSEVGDLKRCSINYDRSGRSKGTAEVVF 137
>gi|118137707|pdb|2F3J|A Chain A, The Solution Structure Of The Ref2-I Mrna Export Factor
(Residues 1-155)
Length = 177
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 72/139 (51%), Gaps = 28/139 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDIIK R Q R RG G R GGR R
Sbjct: 15 MADKMDMSLDDIIKL------NRNQRRVNRGGGPRRNRPAIARGGR------------NR 56
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
P+ Y+ R + P WQHDLF+ G G+E G KL VSNL GV++ DI+EL
Sbjct: 57 PAPYS------RPKPLPDKWQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQEL 108
Query: 119 FSEIGELKRYAIHFDKNGR 137
F+E G LK+ A+ +D++GR
Sbjct: 109 FAEFGTLKKAAVDYDRSGR 127
>gi|195568864|ref|XP_002102432.1| GD19510 [Drosophila simulans]
gi|194198359|gb|EDX11935.1| GD19510 [Drosophila simulans]
Length = 273
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 12/148 (8%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRFAGGARRGGANAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+ +GP + AK R N W+HD+++ R A G T+L V NL G
Sbjct: 61 SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAAGGGSGP-TRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGR 137
V+N DI+ELF++ G +K+ A+H+D++GR
Sbjct: 120 VSNTDIKELFNDFGPIKKAAVHYDRSGR 147
>gi|195344125|ref|XP_002038639.1| GM10513 [Drosophila sechellia]
gi|194133660|gb|EDW55176.1| GM10513 [Drosophila sechellia]
Length = 266
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 12/148 (8%)
Query: 1 MATHVDMSLDDIIKS---RKKSERERG-QGRARRGRGRGRGPSGSVSGG-------RMTG 49
M ++MSLDDIIKS +KK + RG G AR+ G+ R G+ GG R G
Sbjct: 1 MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRFTGGARRGGANAGGSPRKPG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPG 109
+ +GP + AK R N W+HD+++ R A G T+L V NL G
Sbjct: 61 SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAAGGGSGP-TRLIVGNLDYG 119
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGR 137
V+N DI+ELF++ G +K+ A+H+D++GR
Sbjct: 120 VSNTDIKELFNDFGPIKKAAVHYDRSGR 147
>gi|357472739|ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
gi|355507709|gb|AES88851.1| THO complex subunit [Medicago truncatula]
Length = 376
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 24/131 (18%)
Query: 26 GRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFED 85
GR+R G G GP A R + R + Y+ AK+ T WQHDL+ D
Sbjct: 140 GRSRPGPASGPGP-----------ARRILNRAGNRAAPYSAAKAPETT----WQHDLYAD 184
Query: 86 S---------LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+ IE GTKLY+SNL GV+NDDI+ELFSE+G+LKR+ +H+D++G
Sbjct: 185 QHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGVHYDRSG 244
Query: 137 RPSVSSVACFA 147
R ++ F+
Sbjct: 245 RSKGTAEVVFS 255
>gi|304441001|gb|ADM33940.1| ALY [Bombyx mori]
Length = 254
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 98/200 (49%), Gaps = 29/200 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----RRGRGRGRGPSGSVSGGRMTGAARRGP 55
M ++M+LDDIIK+ KK+ G GR R GRG G G + SGG G R G
Sbjct: 1 MVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG- 59
Query: 56 LSNARPSSYTIAKSFRRTR---NFPWQHDLFED-----SLRAAGISGIEVG-TKLYVSNL 106
I KS +R N W+HD+F D R +G I G TKL VSNL
Sbjct: 60 ----------ITKSTNYSRGDVNSTWKHDMFNDFGERKLPRNSGT--ITTGPTKLLVSNL 107
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE- 165
GV++ DI+ELFSE G L+ ++H+D++GR ++ F + ++ +P +
Sbjct: 108 DFGVSDSDIKELFSEFGILESASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDG 167
Query: 166 -VMHLQLLSDTIMYCWMENR 184
M++QL + I E R
Sbjct: 168 RAMNIQLATSEINTLRPEAR 187
>gi|125543328|gb|EAY89467.1| hypothetical protein OsI_10999 [Oryza sativa Indica Group]
Length = 273
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSE-RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPL--S 57
MA +DM+LDDIIK+ KK+ R G G G G GG R P S
Sbjct: 1 MAETLDMTLDDIIKNNKKANPSSGRGRRGSAAGGGGGGGGGVGGGGGGGVGPTRRPFKRS 60
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPG 109
R Y K+ WQHD++ D G +S IE GTKLY+SNL G
Sbjct: 61 GNRAGPYQPPKAPESA----WQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFG 116
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
V+ +DI+ELFSE+G+LK+Y IH+D++GR ++ FA
Sbjct: 117 VSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFA 154
>gi|108707486|gb|ABF95281.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|125585793|gb|EAZ26457.1| hypothetical protein OsJ_10345 [Oryza sativa Japonica Group]
gi|215701346|dbj|BAG92770.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765693|dbj|BAG87390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767507|dbj|BAG99735.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSE-RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPL--S 57
MA +DM+LDDIIK+ KK+ R G G G G GG R P S
Sbjct: 1 MAETLDMTLDDIIKNNKKANPSSGRGRRGSAAGGGGGGGGGVGGGGGGGVGPTRRPFKRS 60
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPG 109
R Y K+ WQHD++ D G +S IE GTKLY+SNL G
Sbjct: 61 GNRAGPYQPPKAPESA----WQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFG 116
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
V+ +DI+ELFSE+G+LK+Y IH+D++GR ++ FA
Sbjct: 117 VSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFA 154
>gi|148689731|gb|EDL21678.1| mCG1038850 [Mus musculus]
Length = 269
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRK--KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL+VSNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFVSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGR 124
>gi|168064322|ref|XP_001784112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664363|gb|EDQ51086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 26/155 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA--------RRGRGR-GRGPSGSVSGGRMTGAA 51
M + +DMSLDD+IK+ K + R G +RGR G +G SGG+++
Sbjct: 1 MTSALDMSLDDLIKTNKSATRGGRGGGGGRGTGSAPQRGRATIAAGTAGGYSGGKISEER 60
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R +A F + + R G GIE GTKLY+SNL GV+
Sbjct: 61 VRQAQDSA----------------FQYTNHFIPAVGRGVG-GGIETGTKLYISNLDYGVS 103
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
NDDI+ELFSEIG+L+R +I++D++GR ++ F
Sbjct: 104 NDDIKELFSEIGDLRRCSINYDRSGRSKGTAEVVF 138
>gi|94466657|emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 78 WQHDLFEDSLRA-------AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI 130
W HD+F + A GISGIE G KL +SNL GV+N+DI+ELFSE G++KRY+I
Sbjct: 65 WDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAGDIKRYSI 124
Query: 131 HFDKNGRPSVSSVACFA 147
H+DK+GR ++ F+
Sbjct: 125 HYDKSGRSKGTAEVIFS 141
>gi|297810351|ref|XP_002873059.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata]
gi|297318896|gb|EFH49318.1| hypothetical protein ARALYDRAFT_487031 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +DMSLDDIIKS +K RG+G G G + G A R AR
Sbjct: 1 MSGGLDMSLDDIIKSNRKPTGSRGRGGIGGGNNTGGRGGSGSNSGPSRRFANR---VGAR 57
Query: 61 PSSYTIAKSFRRTRNFPWQHDLF--EDSLRAA----------GISGIEVGTKLYVSNLHP 108
+ Y+ ++ + WQ+D+F + S+ AA G S IE GTKLY+SNL
Sbjct: 58 TAPYSRPIQ-QQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLDY 116
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
GV+N+DI+ELFSE+G+LKRY IH+D++GR ++ F+
Sbjct: 117 GVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFS 155
>gi|262263334|ref|NP_001160106.1| uncharacterized protein LOC100043227 [Mus musculus]
Length = 294
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGR 124
>gi|262263339|ref|NP_001160110.1| uncharacterized protein LOC100043231 [Mus musculus]
gi|262263341|ref|NP_001160111.1| uncharacterized protein LOC100043235 [Mus musculus]
gi|262263343|ref|NP_001160113.1| uncharacterized protein LOC100043239 [Mus musculus]
Length = 289
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRK--KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGR 124
>gi|187956930|gb|AAI58100.1| EG667568 protein [Mus musculus]
Length = 291
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRK--KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 1 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGR 121
>gi|187956926|gb|AAI58091.1| EG667568 protein [Mus musculus]
Length = 286
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRK--KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K + R+R R +RG G R GGR R P
Sbjct: 1 MADKMDMSLEDIIKLNKMQQGRRDRPDSRVKRGTGPKRYRPAFTHGGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGR 121
>gi|51490663|emb|CAG26902.1| ALY protein [Nicotiana benthamiana]
Length = 249
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 3 THVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPS 62
+++D+SLDD+IK R KS R R R G + RR S A
Sbjct: 2 SNLDVSLDDLIK-RNKSSSSRNP--------RPRTSGSGSGTGSGGPSPRRRFPSRAANR 52
Query: 63 SYTIAKSFRRTRNFPWQHDLFEDSLRA-------AGISGIEVGTKLYVSNLHPGVTNDDI 115
S + + W H++F + A GISGIE G KL +SNL GV+N+DI
Sbjct: 53 SAPYSSGPVHAPDSTWDHNMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDI 112
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ELFSE G++KRY+IH+DK+GR ++ F+
Sbjct: 113 KELFSEAGDIKRYSIHYDKSGRSKGTAEVIFS 144
>gi|297600721|ref|NP_001049725.2| Os03g0278300 [Oryza sativa Japonica Group]
gi|255674403|dbj|BAF11639.2| Os03g0278300, partial [Oryza sativa Japonica Group]
Length = 238
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 78 WQHDLFEDSLRAAG--------ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
WQHD++ D G +S IE GTKLY+SNL GV+ +DI+ELFSE+G+LK+Y
Sbjct: 42 WQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYV 101
Query: 130 IHFDKNGRPSVSSVACFA 147
IH+D++GR ++ FA
Sbjct: 102 IHYDRSGRSKGTAEVVFA 119
>gi|397174787|ref|NP_001257571.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|397174792|ref|NP_001257573.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923570|ref|NP_001257827.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923572|ref|NP_001257828.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923574|ref|NP_001257829.1| RNA and export factor-binding protein 2-like [Mus musculus]
gi|399923576|ref|NP_001257830.1| RNA and export factor-binding protein 2-like [Mus musculus]
Length = 264
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSER--ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K +R +R R RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGR 124
>gi|294712530|ref|NP_001171006.1| RNA and export factor-binding protein 2-like [Mus musculus]
Length = 268
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSER--ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K +R +R R RG G R GGR R P
Sbjct: 4 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGR 124
>gi|340711000|ref|XP_003394070.1| PREDICTED: THO complex subunit 4-A-like [Bombus terrestris]
Length = 249
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ--------GRARRGRGRGRGPSGSVSGGRMTGAAR 52
M +DMSLDDIIK K + G RRG R + V GG M G R
Sbjct: 3 MVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARR----TQRVGGGVMRGRNR 58
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 59 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSSIGSAGTTKLLVSNLDFGV 110
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 111 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 146
>gi|350400810|ref|XP_003485968.1| PREDICTED: THO complex subunit 4-A-like [Bombus impatiens]
Length = 249
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ--------GRARRGRGRGRGPSGSVSGGRMTGAAR 52
M +DMSLDDIIK K + G RRG R + V GG M G R
Sbjct: 3 MVDKIDMSLDDIIKQNKGTRPRGGSSRRGRGAGNSPRRGARR----TQRVGGGVMRGRNR 58
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 59 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSSIGSAGTTKLLVSNLDFGV 110
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 111 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 146
>gi|223462021|gb|AAI47567.1| Unknown (protein for MGC:182662) [Mus musculus]
gi|223462812|gb|AAI47507.1| Unknown (protein for MGC:182533) [Mus musculus]
Length = 266
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSER--ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DIIK K +R +R R RG G R GGR R P
Sbjct: 1 MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGR 121
>gi|242036141|ref|XP_002465465.1| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor]
gi|241919319|gb|EER92463.1| hypothetical protein SORBIDRAFT_01g039330 [Sorghum bicolor]
Length = 257
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 78 WQHDLFE----DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ +S +E GTKLY+SNL GV+N+DI+ELFSE+G+LKRY+I++D
Sbjct: 73 WQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNEDIKELFSELGDLKRYSINYD 132
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 133 RSGRSKGTAEVVFA 146
>gi|383850832|ref|XP_003700978.1| PREDICTED: THO complex subunit 4-like [Megachile rotundata]
Length = 249
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ--------GRARRGRGRGRGPSGSVSGGRMTGAAR 52
M ++MSLDDIIK K + G RRG R + V GG M G +R
Sbjct: 3 MVDKIEMSLDDIIKQNKGTRPRGGGGRRGRGAGNSPRRGARR----TQRVGGGVMRGRSR 58
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 59 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSAIGSAGTTKLLVSNLDFGV 110
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 111 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 146
>gi|358341495|dbj|GAA49160.1| THO complex subunit 4 [Clonorchis sinensis]
Length = 466
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 25/133 (18%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D+SLDDII+ +K R GRGR RG + + G R G ARR AR
Sbjct: 1 MDLSLDDIIQRNRKQPR---------GRGRARG-ANPLRGVRRGGIARRSTGGGARVLPE 50
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
WQHD+F+ S V KL++SNL GV+NDDI ELF E G
Sbjct: 51 K------------WQHDMFQGGRDGRQTS---VSNKLHISNLDFGVSNDDINELFREFGA 95
Query: 125 LKRYAIHFDKNGR 137
++R A+H+D++GR
Sbjct: 96 IRRAAVHYDRSGR 108
>gi|159138039|gb|ABW89022.1| transcriptional coactivator [Clonorchis sinensis]
Length = 210
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 31/150 (20%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR--PS 62
+D+SLDDII+ +K R GRGR RG + + G R G ARR AR P
Sbjct: 1 MDLSLDDIIQRNRKQPR---------GRGRARG-ANPLRGVRRGGIARRSTGGGARVLPE 50
Query: 63 SYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
WQHD+F+ S V KL++SNL GV+NDDI ELF E
Sbjct: 51 K--------------WQHDMFQGGRDGRQTS---VSNKLHISNLDFGVSNDDINELFREF 93
Query: 123 GELKRYAIHFDKNGRPSVSSVACFATFSPL 152
G ++R A+H+D++GR ++ F +PL
Sbjct: 94 GAIRRAAVHYDRSGRSLGTAEVVF--LNPL 121
>gi|357120113|ref|XP_003561774.1| PREDICTED: THO complex subunit 4-like, partial [Brachypodium
distachyon]
Length = 230
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 78 WQHDLFEDSLRAAG----ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ D G +S IE GTKL+++NL GV+ +D++ELFSE+G+LKR +IH+D
Sbjct: 36 WQHDMYSDVPAGRGGSGRVSAIETGTKLFITNLEFGVSTEDVKELFSELGDLKRCSIHYD 95
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 96 RSGRSKGTAEVIFA 109
>gi|256051723|ref|XP_002569569.1| RNA and export factor binding protein [Schistosoma mansoni]
Length = 251
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 18/145 (12%)
Query: 5 VDMSLDDIIKSRKKSERERGQGR--ARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPS 62
+DMSLDDIIK + + RG+G +R G +G G + G R L N RP+
Sbjct: 1 MDMSLDDIIKLNRSQQGSRGKGLGWSRAGH---QGRHGGAMQAPVWGNRRSRSLKN-RPT 56
Query: 63 SYTIAKSFRRTRNFPW----------QHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
+ R R P+ QHDLF+ R G + +E+G KL+VSNL GV++
Sbjct: 57 MSGGSAGGGRKRPAPYSRPIQLSNNGQHDLFDSHFR--GGASMEMGGKLFVSNLDCGVSD 114
Query: 113 DDIRELFSEIGELKRYAIHFDKNGR 137
DI+ELFSE G LK A+H+D +GR
Sbjct: 115 ADIQELFSEFGTLKTAAVHYDCSGR 139
>gi|307180346|gb|EFN68372.1| THO complex subunit 4 [Camponotus floridanus]
Length = 247
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 78/161 (48%), Gaps = 33/161 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSER--------------ERGQGRARRGRGRGRGPSGSVSGGR 46
M ++MSLDDIIK K S RG RA+R V GG
Sbjct: 1 MVDKIEMSLDDIIKQTKGSRARGGGRRGRGAGNSPRRGARRAQR-----------VGGGV 49
Query: 47 MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAA-GISGIEVGTKLYVSN 105
M G R G ++ P YT R N W+HD+F+ + G+ G TKL VSN
Sbjct: 50 MRGRNRGGIARSSLP--YT-----RGDVNSAWKHDMFDGVKKVGRGVIGNAGTTKLLVSN 102
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
L GV++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 103 LDFGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 143
>gi|414866139|tpg|DAA44696.1| TPA: hypothetical protein ZEAMMB73_540613 [Zea mays]
Length = 205
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 78 WQHDLF----EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ +S +E GTKLY+SNL GV+NDDI+ELFSE+G+LKR++I +D
Sbjct: 21 WQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNDDIKELFSELGDLKRFSIIYD 80
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 81 RSGRSKGTAEVVFA 94
>gi|322793642|gb|EFZ17092.1| hypothetical protein SINV_14629 [Solenopsis invicta]
Length = 256
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 76/158 (48%), Gaps = 23/158 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----------RRGRGRGRGPSGSVSGGRMTG 49
M ++MSLDDIIK K S G RRG R + PSG V GR G
Sbjct: 6 MVDKIEMSLDDIIKQTKGSRARGSGGGGGRRGRGAGSSPRRGARRPQRPSGGVMRGRSRG 65
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAA-GISGIEVGTKLYVSNLHP 108
R L YT R N W+HD+F+ + G G TKL VSNL
Sbjct: 66 GIARSSLP------YT-----RGDVNSAWKHDMFDGVKKVGRGAIGNAGTTKLLVSNLDF 114
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GV++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 115 GVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 152
>gi|328780459|ref|XP_001121250.2| PREDICTED: THO complex subunit 4-like [Apis mellifera]
Length = 249
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ--------GRARRGRGRGRGPSGSVSGGRMTGAAR 52
M +DMSLDDIIK K S G RRG R + GG M G R
Sbjct: 3 MVDKIDMSLDDIIKQNKGSRPRGGTGRRGRGAGNSPRRGARRTQ-----RVGGVMRGRNR 57
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 58 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSAIGSAGTTKLLVSNLDFGV 109
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 110 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 145
>gi|380014750|ref|XP_003691382.1| PREDICTED: THO complex subunit 4-like [Apis florea]
Length = 293
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA--------RRGRGRGRGPSGSVSGGRMTGAAR 52
M +DMSLDDIIK K S G GR RRG R + GG M G R
Sbjct: 48 MVDKIDMSLDDIIKQNKGSRPRGGTGRRGRGAGNSPRRGARRTQ-----RVGGVMRGRNR 102
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGV 110
G N+ P YT R N W+HD+F D ++ G S I TKL VSNL GV
Sbjct: 103 GGITRNSLP--YT-----RGDVNSAWKHDMF-DGVKKVGRSAIGSAGTTKLLVSNLDFGV 154
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 155 SDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 190
>gi|326505472|dbj|BAJ95407.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512088|dbj|BAJ96025.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527861|dbj|BAK08160.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 78 WQHDLFEDS----LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ D+ +S IE GTKL+++NL GV+ +D++ELFSE+G+LKR +I+FD
Sbjct: 80 WQHDMYSDASARGGGGGRVSAIETGTKLFITNLDFGVSTEDLKELFSELGDLKRCSINFD 139
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 140 RSGRSKGTAEVIFA 153
>gi|326506412|dbj|BAJ86524.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
Query: 78 WQHDLFEDS----LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
WQHD++ D+ +S IE GTKL+++NL GV+ +D++ELFSE+G+LKR +I+FD
Sbjct: 18 WQHDMYSDASARGGGGGRVSAIETGTKLFITNLDFGVSTEDLKELFSELGDLKRCSINFD 77
Query: 134 KNGRPSVSSVACFA 147
++GR ++ FA
Sbjct: 78 RSGRSKGTAEVIFA 91
>gi|42568662|ref|NP_200803.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009872|gb|AED97255.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 178
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 81 DLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
D ED +GIE GTKLY+SNL GV N+DI+ELF+E+GELKRY +HFD++GR
Sbjct: 4 DRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKG 63
Query: 141 SSVACFA 147
++ ++
Sbjct: 64 TAEVVYS 70
>gi|251765071|sp|B5FXN8.1|THOC4_TAEGU RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|197127301|gb|ACH43799.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127302|gb|ACH43800.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127303|gb|ACH43801.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127304|gb|ACH43802.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127306|gb|ACH43804.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
AR + R + P WQHDLF+ A +G+E G KL VSNL GV++ D
Sbjct: 61 VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAG--AGVETGGKLLVSNLDFGVSDAD 118
Query: 115 IRELFSEIGELKRYAIHFDKNGR 137
I+ELF+E G LK+ A+H+D++GR
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGR 141
>gi|197127309|gb|ACH43807.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127310|gb|ACH43808.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
AR + R + P WQHDLF+ A +G+E G KL VSNL GV++ D
Sbjct: 61 VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAG--AGVETGGKLLVSNLDFGVSDAD 118
Query: 115 IRELFSEIGELKRYAIHFDKNGR 137
I+ELF+E G LK+ A+H+D++GR
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGR 141
>gi|356499657|ref|XP_003518653.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine
max]
Length = 260
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 30/157 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDI K R + S R T + AR
Sbjct: 1 MAGGIDMSLDDIKK---------------------RSAAAVASRRRFTVVH-----NPAR 34
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ Y I + +++ + + E+S G + IE GTKLY+SNL GVTNDDI+ LFS
Sbjct: 35 TTPYPIPQVRQQSMVALFPEMVLEES----GAAKIESGTKLYLSNLDHGVTNDDIKLLFS 90
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
E GELK Y IH+D++GR ++ F S L ++
Sbjct: 91 EEGELKSYTIHYDQSGRSKGTAEVVFVRHSDALLAIK 127
>gi|289740255|gb|ADD18875.1| RRM motif-containing protein [Glossina morsitans morsitans]
Length = 249
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVS-GGRMTGAARRGPLSNA 59
M ++MSLD+IIKS ++ + G+G G R +G+ GGR R P
Sbjct: 1 MVDKIEMSLDEIIKSNRQIRKSGGRGGVA---GNRRNSAGTQRRGGRRNQGTSRKPGGGI 57
Query: 60 RPSSYTI-----AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
AK R N W+HD+++ R GI KL VSNL GV++ D
Sbjct: 58 IKGRGGAGGIHKAKFSRGDVNSAWKHDMYDGPKR--GILKSAESAKLLVSNLDYGVSDSD 115
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE--VMHLQLL 172
I+ELF+E G LK+ A+H+D++GR ++ F S ++ +P + M++Q L
Sbjct: 116 IKELFTEFGPLKKAAVHYDRSGRSLGTADVVFERRSDALKAIKQYNGVPLDGRPMNIQFL 175
Query: 173 SD 174
++
Sbjct: 176 AN 177
>gi|33146678|dbj|BAC80073.1| putative RNA and export factor binding protein [Oryza sativa
Japonica Group]
Length = 323
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL PGVT DD++ELFSEIGELKRY++++DK+G+ ++ FA
Sbjct: 135 LETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFA 187
>gi|357161377|ref|XP_003579071.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 259
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 45/55 (81%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
SG+E GTKLY+SNL V+N+DI+ELFSE+G+LKRY+I++DK+GR ++ FA
Sbjct: 90 SGVETGTKLYISNLDYNVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFA 144
>gi|218199342|gb|EEC81769.1| hypothetical protein OsI_25456 [Oryza sativa Indica Group]
Length = 336
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL PGVT DD++ELFSEIGELKRY++++DK+G+ ++ FA
Sbjct: 86 LETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFA 138
>gi|262263336|ref|NP_001160109.1| uncharacterized protein LOC100043224 [Mus musculus]
gi|263195218|ref|NP_001160108.1| uncharacterized protein LOC100043247 [Mus musculus]
Length = 289
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSE--RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DI+K K + +R R +RG G R GR R P
Sbjct: 4 MADKMDMSLEDILKLNKMQQGRLDRPDSRVKRGTGPKRYRPAFTHDGR----NRLAP--- 56
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 57 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 103
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 104 LLFAEFGTLKKSAVHYDRCGR 124
>gi|223461989|gb|AAI47488.1| Unknown (protein for MGC:182349) [Mus musculus]
Length = 285
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 1 MATHVDMSLDDIIKSRK--KSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
MA +DMSL+DI+K K + +R R +RG G R GR R P
Sbjct: 1 MADKMDMSLEDILKLNKMQQGRLDRPDSRVKRGTGPKRYRPAFTHDGR----NRLAP--- 53
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+ R + P WQHDLF R G + ++ G KL++SNLH GV++ DI+
Sbjct: 54 -----------YCRPKQLPDKWQHDLFIGGFR--GQNHVDTGGKLFLSNLHFGVSDADIQ 100
Query: 117 ELFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D+ GR
Sbjct: 101 LLFAEFGTLKKSAVHYDRCGR 121
>gi|108707487|gb|ABF95282.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108707488|gb|ABF95283.1| RNA and export factor-binding protein, putative, expressed [Oryza
sativa Japonica Group]
gi|215693824|dbj|BAG89023.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704293|dbj|BAG93133.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 193
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 44/56 (78%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+S IE GTKLY+SNL GV+ +DI+ELFSE+G+LK+Y IH+D++GR ++ FA
Sbjct: 19 VSAIETGTKLYISNLDFGVSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFA 74
>gi|224113973|ref|XP_002332459.1| predicted protein [Populus trichocarpa]
gi|222832494|gb|EEE70971.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
S IE GTKLY+SNL GV+ +DI+ELFSEIG+LKRY++H+D++GR ++ FA
Sbjct: 2 SSIETGTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDRSGRSEGTAEIVFA 56
>gi|222636721|gb|EEE66853.1| hypothetical protein OsJ_23644 [Oryza sativa Japonica Group]
Length = 194
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL PGVT DD++ELFSEIGELKRY++++DK+G+ ++ FA
Sbjct: 82 LETGTKLHISNLDPGVTVDDVQELFSEIGELKRYSVNYDKDGKSQGTAEVVFA 134
>gi|363740921|ref|XP_001232393.2| PREDICTED: THO complex subunit 4 [Gallus gallus]
Length = 255
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ A +G+E G KL VSNL GV++ DI+E
Sbjct: 71 RPAPYS------RPKQLPEKWQHDLFDSGFGAG--AGVETGGKLLVSNLDFGVSDADIQE 122
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 123 LFAEFGTLKKAAVHYDRSGR 142
>gi|350538663|ref|NP_001232343.1| THO complex subunit 4 [Taeniopygia guttata]
gi|197127307|gb|ACH43805.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ A +G+E G KL VSNL GV++ DI+E
Sbjct: 70 RPAPYS------RPKQLPEKWQHDLFDSGFGAG--AGVETGGKLLVSNLDFGVSDADIQE 121
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 122 LFAEFGTLKKAAVHYDRSGR 141
>gi|332016673|gb|EGI57527.1| RNA and export factor-binding protein 2 [Acromyrmex echinatior]
Length = 250
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRA-----------RRGRGRGRGPSGSVSGGRMTG 49
M ++MSLDDIIK K S G G + RRG R + SG V GR G
Sbjct: 1 MVDKIEMSLDDIIKQTKGSRARGGGGASGRRGRGAGSSPRRGARRVQRASGGVMRGRNRG 60
Query: 50 AARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG--TKLYVSNLH 107
R L YT R N W+HD+F D ++ G I TKL VSNL
Sbjct: 61 GIARSSLP------YT-----RGDVNSAWKHDMF-DGVKKVGRGAIGSAGTTKLLVSNLD 108
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GV++ DI+ELFSE G LK A+H+D++GR S+ F
Sbjct: 109 FGVSDSDIQELFSEFGPLKSAAVHYDRSGRSLGSADVIF 147
>gi|242047942|ref|XP_002461717.1| hypothetical protein SORBIDRAFT_02g007020 [Sorghum bicolor]
gi|241925094|gb|EER98238.1| hypothetical protein SORBIDRAFT_02g007020 [Sorghum bicolor]
Length = 255
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 44/53 (83%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL PGVT +D++ELFSE+GELKRY++++DK+GR ++ FA
Sbjct: 85 LETGTKLHISNLDPGVTVEDVQELFSEVGELKRYSMNYDKDGRSKGTAEVVFA 137
>gi|147898399|ref|NP_001089314.1| THO complex subunit 4-A [Xenopus laevis]
gi|82230182|sp|Q58EA2.1|THO4A_XENLA RecName: Full=THO complex subunit 4-A; Short=Tho4-A; AltName:
Full=Aly/REF export factor-A
gi|61403478|gb|AAH92013.1| MGC84954 protein [Xenopus laevis]
Length = 256
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ A +G+E G KL VSNL GV++ DI+E
Sbjct: 73 RPTPYS------RPKQLPDKWQHDLFDSGFGAG--AGMETGGKLLVSNLDFGVSDADIQE 124
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 125 LFAEFGTLKKAAVHYDRSGR 144
>gi|359486823|ref|XP_002279224.2| PREDICTED: THO complex subunit 4 [Vitis vinifera]
Length = 84
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 39/42 (92%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+E GTKLY+SNL GV+NDDI+ELFSE+GELK+Y+IH+DK+G
Sbjct: 1 METGTKLYISNLEYGVSNDDIKELFSEVGELKQYSIHYDKSG 42
>gi|343172826|gb|AEL99116.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 163
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G S IE GTKLY+SNL GV+ DD++ELFSE+G+LKRY +H+D++GR ++ ++
Sbjct: 3 GESSIETGTKLYISNLDYGVSTDDVKELFSEVGDLKRYTVHYDRSGRSKGTAEVVYS 59
>gi|197127308|gb|ACH43806.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + GR RGRG G GG G A GP+ N
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP 60
Query: 59 --ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
AR + R + P WQHDLF+ A +G+ G KL VSNL GV++ D
Sbjct: 61 VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAG--AGVYTGGKLLVSNLDFGVSDAD 118
Query: 115 IRELFSEIGELKRYAIHFDKNGR 137
I+ELF+E G LK+ A+H+D++GR
Sbjct: 119 IQELFAEFGTLKKAAVHYDRSGR 141
>gi|387019131|gb|AFJ51683.1| THO complex subunit 4 [Crotalus adamanteus]
Length = 253
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLFE +G+E G KL VSNL GV++ DI+E
Sbjct: 71 RPAPYS------RPKQLPEKWQHDLFESCFGPG--AGVETGGKLLVSNLDFGVSDADIQE 122
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 123 LFAEFGTLKKAAVHYDRSGR 142
>gi|357157773|ref|XP_003577909.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Brachypodium distachyon]
Length = 236
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 23/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDD+I K R +GRARR GRG GP +AR
Sbjct: 1 MAGSLDMSLDDLITKNKPHLR---RGRARRNH-EGRG----------------GPTRSAR 40
Query: 61 --PSSYTIAKSFRRTRNFPWQHD-LFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
S A R NF Q + R + + T+LY+SNL V+N+DI++
Sbjct: 41 RFHSRAAAAPYHHRQLNFHQQAPPAYGFVARPMAMVEEDAPTRLYISNLDYNVSNEDIKD 100
Query: 118 LFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
LFSE+GE+ RY+I++DK+GR ++ F+T S
Sbjct: 101 LFSELGEVMRYSINYDKSGRSKGTAEVVFSTRS 133
>gi|432843262|ref|XP_004065594.1| PREDICTED: THO complex subunit 4-A-like [Oryzias latipes]
Length = 251
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSG-GRMTGAARRGPLSNA 59
MA + MSLDDIIK K+ R G R G S G GR + +R
Sbjct: 1 MADKMSMSLDDIIKMNKREGRGGGGSSGRERGSGRAGGSSRPPGRGRQSNFSRE---RTN 57
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEV-------GTKLYVSNLHPGV 110
RP+ YT R R P WQHD+FE+ R E +KL +SNL GV
Sbjct: 58 RPAPYT------RPRELPDKWQHDMFEEHSRGPRAQSPEADDSFGGSSSKLLISNLDFGV 111
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGR 137
++ DI++LF E G LK+ +IH+D++GR
Sbjct: 112 SDSDIKDLFEEFGTLKKASIHYDRSGR 138
>gi|403280751|ref|XP_003945202.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4 [Saimiri
boliviensis boliviensis]
Length = 230
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
Query: 55 PLSNARPSSYTIAKS--FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
P +P+ ++ ++ R + P WQHDLF DS AG +G+E G KL VSNL GV
Sbjct: 33 PTEQLQPAEHSQSQPXPHSRPKQLPDKWQHDLF-DSGFGAG-AGVETGGKLLVSNLDFGV 90
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGR 137
++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 91 SDADIQELFAEFGTLKKAAVHYDRSGR 117
>gi|223646706|gb|ACN10111.1| THO complex subunit 4 [Salmo salar]
gi|223672557|gb|ACN12460.1| THO complex subunit 4 [Salmo salar]
Length = 242
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 87/171 (50%), Gaps = 34/171 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSG-----SVSGGRMTGAARRGP 55
MA +DMSLDDII+ KK RG R GRG SG +VSGGR G+ GP
Sbjct: 1 MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAVSGGRTGGS---GP 57
Query: 56 L----------SNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT---- 99
+ S++RP+ Y+ R R P WQHD+FE G G
Sbjct: 58 MRSRQNFSGDRSDSRPTPYS------RPRELPDKWQHDMFEGGFVGNAGGGGGAGGGGGV 111
Query: 100 ----KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR ++ F
Sbjct: 112 ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHF 162
>gi|343172824|gb|AEL99115.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 163
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
G S IE GTK+Y+SNL GV+ DD++ELFSE+G+LKRY +H+D++GR
Sbjct: 3 GESSIETGTKIYISNLDYGVSTDDVKELFSEVGDLKRYTVHYDRSGR 49
>gi|357111105|ref|XP_003557355.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 253
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL P VT +D++ELFSE+GELKRY++++DK+G+ S+ FA
Sbjct: 83 LETGTKLHISNLKPSVTVEDVQELFSEVGELKRYSVNYDKDGKSQGSAEVVFA 135
>gi|148223950|ref|NP_001086215.1| THO complex subunit 4-B [Xenopus laevis]
gi|82236414|sp|Q6GLW1.1|THO4B_XENLA RecName: Full=THO complex subunit 4-B; Short=Tho4-B; AltName:
Full=Aly/REF export factor-B
gi|49257659|gb|AAH74336.1| MGC84169 protein [Xenopus laevis]
Length = 256
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ +G+E G KL VSNL GV++ DI+E
Sbjct: 72 RPTPYS------RPKQLPDKWQHDLFDSGFGTG--AGMETGGKLLVSNLDFGVSDADIQE 123
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 124 LFAEFGSLKKAAVHYDRSGR 143
>gi|309264066|ref|XP_003086200.1| PREDICTED: RNA and export factor-binding protein 2-like [Mus
musculus]
Length = 193
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A ++M+L+DIIK K +R + R RG G P +G R P
Sbjct: 5 ADKMNMTLEDIIKLNKIQQRRHNRPDPRMNRGAG--PKRYRPAITHSGRNRLAP------ 56
Query: 62 SSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+RR + P WQHD F RA + ++ KL +SNLH V++ DIR+LF
Sbjct: 57 --------YRRPKLLPDKWQHDRFVGCFRAG--NHMDTSGKLLLSNLHYRVSDADIRKLF 106
Query: 120 SEIGELKRYAIHFDKNGR 137
SE G L++YA+H+D +GR
Sbjct: 107 SEFGTLRKYAVHYDGSGR 124
>gi|62857865|ref|NP_001017027.1| THO complex subunit 4 [Xenopus (Silurana) tropicalis]
gi|123915952|sp|Q28FB9.1|THOC4_XENTR RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|89269092|emb|CAJ81934.1| THO complex 4 [Xenopus (Silurana) tropicalis]
gi|138519928|gb|AAI35843.1| hypothetical protein LOC549781 [Xenopus (Silurana) tropicalis]
Length = 260
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ +G+E G KL VSNL GV++ DI+E
Sbjct: 76 RPAPYS------RPKQLPDKWQHDLFDSGFGTG--AGMETGGKLLVSNLDFGVSDADIQE 127
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 128 LFAEFGTLKKAAVHYDRSGR 147
>gi|223947451|gb|ACN27809.1| unknown [Zea mays]
gi|413956155|gb|AFW88804.1| hypothetical protein ZEAMMB73_191156 [Zea mays]
Length = 182
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSP 151
+S +E G KLY+SNL GV+N+DI+ELFSE+G+LKR++I++D++GR ++ FA S
Sbjct: 16 VSALETGAKLYISNLDFGVSNEDIKELFSELGDLKRFSINYDRSGRSKGTAEVVFARRSD 75
Query: 152 LFLWVQ 157
V+
Sbjct: 76 AVAAVK 81
>gi|326507090|dbj|BAJ95622.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 260
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +DMSLDDII K R RGR P+ + SGG R +R
Sbjct: 1 MADTLDMSLDDIITKNKPHHR----------RGR-HNPASAASGGSARPRRRF----RSR 45
Query: 61 PSSYTIAKSFRR---TRNFPWQHDLFEDSLR-AAGISGIEVGTKLYVSNLHPGVTNDDIR 116
++ +A + + + P S+ S ++ TKLY+SNL V+N+DI+
Sbjct: 46 AATRAVAAPYHQLSLQQQVPPAFGYVAQSMAMVTAPSALDSPTKLYISNLDYNVSNEDIK 105
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
ELFSE+G+++RY+I++DK+GR ++ F+
Sbjct: 106 ELFSEMGDIQRYSINYDKSGRSKGTAEVVFSA 137
>gi|195391988|ref|XP_002054641.1| GJ22697 [Drosophila virilis]
gi|194152727|gb|EDW68161.1| GJ22697 [Drosophila virilis]
Length = 274
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 39/200 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSV-SGGRM------------ 47
M ++MSLDDIIKS + ++ +G GRG GPSG+ GG+
Sbjct: 1 MVDKIEMSLDDIIKSTRTQKKPQG--------GRG-GPSGTRRPGGQQRFGTGGTRRGGG 51
Query: 48 --TGAARR--------GPLSNARPSSYTIAKSFRRTR---NFPWQHDLFEDSLRAAGISG 94
+G+ R+ G L R + R R N W+HD++ D + G +G
Sbjct: 52 PNSGSPRKPAPASGAGGVLKGRRGGGSGAIQKPRLARGDVNSAWKHDMY-DGPKRNGSAG 110
Query: 95 IEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
G T+L V NL GV+N DI+ELF++ G +K+ A+H+D++GR ++ F S
Sbjct: 111 NSTGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDRSGRSLGTADVIFERRSDAL 170
Query: 154 LWVQLKWYMPEE--VMHLQL 171
++ +P + M +QL
Sbjct: 171 KAIKQYHGVPLDGRPMTIQL 190
>gi|407262786|ref|XP_003945361.1| PREDICTED: RNA and export factor-binding protein 2-like [Mus
musculus]
Length = 184
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 7 MSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTI 66
M+L+DIIK K +R + R RG G P +G R P
Sbjct: 1 MTLEDIIKLNKIQQRRHNRPDPRMNRGAG--PKRYRPAITHSGRNRLAP----------- 47
Query: 67 AKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
+RR + P WQHD F RA + ++ KL +SNLH V++ DIR+LFSE G
Sbjct: 48 ---YRRPKLLPDKWQHDRFVGCFRAG--NHMDTSGKLLLSNLHYRVSDADIRKLFSEFGT 102
Query: 125 LKRYAIHFDKNGR 137
L++YA+H+D +GR
Sbjct: 103 LRKYAVHYDGSGR 115
>gi|297606944|ref|NP_001059250.2| Os07g0237100 [Oryza sativa Japonica Group]
gi|255677625|dbj|BAF21164.2| Os07g0237100 [Oryza sativa Japonica Group]
Length = 204
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIR---ELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL PGVT DD++ ELFSEIGELKRY++++DK+G+ ++ FA
Sbjct: 89 LETGTKLHISNLDPGVTVDDVQVLFELFSEIGELKRYSVNYDKDGKSQGTAEVVFA 144
>gi|226486950|emb|CAX75340.1| THO complex subunit 4 [Schistosoma japonicum]
Length = 213
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 73 TRNFP--WQHDLFED--SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
+R+ P WQHD+F+D S + AG +G T+L++SNL GV NDDI ELF E G +++
Sbjct: 48 SRSLPDKWQHDMFQDARSPKGAGTTG-GSATRLHISNLDFGVNNDDINELFREFGAIRKA 106
Query: 129 AIHFDKNGRPSVSSVACFATFSPL 152
+H+D++GR ++ F +PL
Sbjct: 107 TVHYDRSGRSLGTAEVVF--INPL 128
>gi|115486846|ref|NP_001065229.1| Os12g0100100 [Oryza sativa Japonica Group]
gi|77553349|gb|ABA96145.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113648417|dbj|BAF28929.1| Os12g0100100 [Oryza sativa Japonica Group]
gi|215692544|dbj|BAG87964.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768790|dbj|BAH01019.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 37/147 (25%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS----NAR 60
+DMSLDD+I ++ K RR R G PS S R + P A
Sbjct: 7 LDMSLDDLITNKYK----------RRSRP-GPAPSARRSHSRAATRSAAAPYHAITFQAP 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++Y + + +E GTKLY+SNL V+N+DI+ELFS
Sbjct: 56 PTAY----------------------VHPTPAANVETGTKLYISNLDYAVSNEDIKELFS 93
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACFA 147
E+G++KRY+I++D++GR ++ F+
Sbjct: 94 EVGDVKRYSINYDRSGRSKGTAEVVFS 120
>gi|302756027|ref|XP_002961437.1| hypothetical protein SELMODRAFT_7263 [Selaginella moellendorffii]
gi|302817177|ref|XP_002990265.1| hypothetical protein SELMODRAFT_8476 [Selaginella moellendorffii]
gi|300141974|gb|EFJ08680.1| hypothetical protein SELMODRAFT_8476 [Selaginella moellendorffii]
gi|300170096|gb|EFJ36697.1| hypothetical protein SELMODRAFT_7263 [Selaginella moellendorffii]
Length = 80
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
++ G +LYVSNL GV+NDDI+ELFSEIGELK+ +IH+DK GR ++ FA
Sbjct: 1 LDEGARLYVSNLDSGVSNDDIKELFSEIGELKQCSIHYDKVGRSKGTAEVYFA 53
>gi|56759476|gb|AAW27878.1| SJCHGC01511 protein [Schistosoma japonicum]
gi|226470454|emb|CAX70507.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486952|emb|CAX75341.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486954|emb|CAX75342.1| THO complex subunit 4 [Schistosoma japonicum]
gi|226486956|emb|CAX75343.1| THO complex subunit 4 [Schistosoma japonicum]
Length = 213
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 73 TRNFP--WQHDLFED--SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
+R+ P WQHD+F+D S + AG +G T+L++SNL GV NDDI ELF E G +++
Sbjct: 48 SRSLPDKWQHDMFQDARSPKGAGTTG-GSATRLHISNLDFGVNNDDINELFREFGAIRKA 106
Query: 129 AIHFDKNGRPSVSSVACFATFSPL 152
+H+D++GR ++ F +PL
Sbjct: 107 TVHYDRSGRSLGTAEVVF--INPL 128
>gi|125575903|gb|EAZ17125.1| hypothetical protein OsJ_32627 [Oryza sativa Japonica Group]
Length = 177
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 37/147 (25%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS----NAR 60
+DMSLDD+I ++ K RR R G PS S R + P A
Sbjct: 7 LDMSLDDLITNKYK----------RRSRP-GPAPSARRSHSRAATRSAAAPYHAITFQAP 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P++Y + + +E GTKLY+SNL V+N+DI+ELFS
Sbjct: 56 PTAY----------------------VHPTPAANVETGTKLYISNLDYAVSNEDIKELFS 93
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACFA 147
E+G++KRY+I++D++GR ++ F+
Sbjct: 94 EVGDVKRYSINYDRSGRSKGTAEVVFS 120
>gi|212722820|ref|NP_001132074.1| uncharacterized protein LOC100193488 [Zea mays]
gi|194693354|gb|ACF80761.1| unknown [Zea mays]
gi|195640536|gb|ACG39736.1| THO complex subunit 4 [Zea mays]
gi|414884084|tpg|DAA60098.1| TPA: THO complex subunit 4 isoform 1 [Zea mays]
gi|414884085|tpg|DAA60099.1| TPA: THO complex subunit 4 isoform 2 [Zea mays]
Length = 249
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E GTKL++SNL GVT +D++ELFSE+GELKRY++++DK+GR + FA
Sbjct: 79 LETGTKLHISNLDSGVTIEDVQELFSEVGELKRYSMNYDKDGRSKGTVEVVFA 131
>gi|317454987|pdb|2KT5|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hsv-1
Icp27 Peptide
Length = 124
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G G+E G KL VSNL GV++ DI+ELF+E G LK+ A+ +D++GR
Sbjct: 17 WQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGR 74
>gi|390980746|pdb|2YKA|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hvs
Orf57 Peptide
Length = 124
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ G G+E G KL VSNL GV++ DI+ELF+E G LK+ A+ +D++GR
Sbjct: 17 WQHDLFDSG--CGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGR 74
>gi|391343173|ref|XP_003745887.1| PREDICTED: RNA and export factor-binding protein 2-like
[Metaseiulus occidentalis]
Length = 257
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 68/161 (42%), Gaps = 48/161 (29%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ--------------------GRARR----GRGRGR 36
M VDMSLDDIIKS + S + G AR+ G GR
Sbjct: 1 MVDKVDMSLDDIIKSNRSSFKTGRGGRGGPRRGGGGARPRGARAVGPARKAFSTGAGRKF 60
Query: 37 GPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIE 96
P GS P+ S R WQHD F +
Sbjct: 61 APKGS-------------------PAKKNNGSSGDR-----WQHDKFRGPAANGTAPNRD 96
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+KL +SNLH GV++ DIRELF+E G LK+ A+H+D++GR
Sbjct: 97 GSSKLTISNLHYGVSDADIRELFNEFGALKKAAVHYDRSGR 137
>gi|414588876|tpg|DAA39447.1| TPA: hypothetical protein ZEAMMB73_762792 [Zea mays]
Length = 127
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 30/151 (19%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +DMSLDD+IK K R + SG AA P
Sbjct: 1 MSSGLDMSLDDLIKQSKS-----------RPKANPASSSGPARRAHPARAAPYPP----- 44
Query: 61 PSSYTIAKSFRRTRNFPW------QHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
+A R T + P+ + + A +E G KL++SNL GVT +D
Sbjct: 45 -----VAPKARATADSPYGVYSEQIAAIAAAAPLPAKARSLETGMKLHISNLDSGVTVED 99
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVAC 145
++ELFSE+GELKRY++++DK+GR S V C
Sbjct: 100 VQELFSEVGELKRYSMNYDKDGR---SKVEC 127
>gi|414588875|tpg|DAA39446.1| TPA: RNA and export factor-binding protein 2 [Zea mays]
Length = 250
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+E G KL++SNL GVT +D++ELFSE+GELKRY++++DK+GR ++ FA
Sbjct: 80 LETGMKLHISNLDSGVTVEDVQELFSEVGELKRYSMNYDKDGRSKGTAEVVFA 132
>gi|242003936|ref|XP_002422915.1| THO complex subunit, putative [Pediculus humanus corporis]
gi|212505808|gb|EEB10177.1| THO complex subunit, putative [Pediculus humanus corporis]
Length = 315
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQ---------GRARRGRGRGRGPSGSVSGGRMTGAA 51
M VDMSL DIIK K+ + G RR RG R G GA
Sbjct: 66 MVDKVDMSLADIIKQSKQGRGTNRRRRGNTRAFGGGNRRSRGSLRNTVGG-------GAL 118
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFED--SLRAA-GISGIEVGTKLYVSNLHP 108
R +N R S Y+ +R WQHD+F+ +R+ G+ G KL +SNL
Sbjct: 119 RSRRSANLR-SPYSRGTGDIESR---WQHDMFDGFAPVRSPRGVQGAMGPAKLLISNLEF 174
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GV++ D+ ELF+E G LK A+H+D++GR
Sbjct: 175 GVSDSDVTELFAEFGPLKSAAVHYDRSGR 203
>gi|47194964|emb|CAF92225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 104
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHD+FED A E KL VSNL GV++ D+RELF+E G LK +IH+D++GR
Sbjct: 8 WQHDMFEDHEDGAPAGEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKEASIHYDRSGR 67
>gi|297611011|ref|NP_001065221.2| Os11g0100200 [Oryza sativa Japonica Group]
gi|77548276|gb|ABA91073.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218190893|gb|EEC73320.1| hypothetical protein OsI_07508 [Oryza sativa Indica Group]
gi|222615348|gb|EEE51480.1| hypothetical protein OsJ_32621 [Oryza sativa Japonica Group]
gi|255679677|dbj|BAF27356.2| Os11g0100200 [Oryza sativa Japonica Group]
Length = 224
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 44/55 (80%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ +E GTKL++SNL V+N+DI+ELFSE+G++KRY+I++DK+GR ++ F+
Sbjct: 62 TPVETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFS 116
>gi|395512140|ref|XP_003760302.1| PREDICTED: RNA and export factor-binding protein 2-like
[Sarcophilus harrisii]
Length = 363
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGR--GRGRGPSGSVSGGRMTGA--ARR--- 53
+ +D+SLDDI K + +RGQ R R R R +G+ G + GA A R
Sbjct: 104 VTNKMDISLDDINKLNRS---QRGQCGGDRDRHWDRERDRAGAQGGRDVWGAQVAARISR 160
Query: 54 --GPLSNARPSSYTIAKSFRRTRNFPW----------QHDLFEDSLRAAGISGIEVGTKL 101
GP+ N + + A R R P+ Q D+F L G +E G KL
Sbjct: 161 GGGPVRNRQAMARGGASGGSRNRPAPYSQPKRLPHKGQPDVFHSDL--GGRPVLETGAKL 218
Query: 102 YVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+SNL GV+N DI+ELF+ G LK+ A+H+D++GR
Sbjct: 219 LISNLDCGVSNADIQELFAACGTLKKAALHYDRSGR 254
>gi|218190891|gb|EEC73318.1| hypothetical protein OsI_07506 [Oryza sativa Indica Group]
Length = 226
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 44/55 (80%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ +E GTKL++SNL V+N+DI+ELFSE+G++KRY+I++DK+GR ++ F+
Sbjct: 62 TPVETGTKLHISNLDYAVSNEDIKELFSEVGDVKRYSINYDKSGRSKGTAEVVFS 116
>gi|159481074|ref|XP_001698607.1| RNA export factor [Chlamydomonas reinhardtii]
gi|158282347|gb|EDP08100.1| RNA export factor [Chlamydomonas reinhardtii]
Length = 137
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 78 WQHDLFED---SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
WQHD++ED + R A ++ TKL + NLH GV+ DD+ ELFS +G +K + ++FD
Sbjct: 19 WQHDMYEDHAPAPRRAPMAQAATSTKLIIRNLHHGVSADDVLELFSTLGAVKNHGVNFDA 78
Query: 135 NGRPSVSSVACFAT 148
+GR S F T
Sbjct: 79 SGRSLGSGFVVFET 92
>gi|196000482|ref|XP_002110109.1| hypothetical protein TRIADDRAFT_53742 [Trichoplax adhaerens]
gi|190588233|gb|EDV28275.1| hypothetical protein TRIADDRAFT_53742 [Trichoplax adhaerens]
Length = 245
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F R+R P W HD+++ G + I +KL +SNL GV+++DI+ELFSE G LK+
Sbjct: 61 FSRSRTLPDKWDHDMYKGG--GLGPNRISTSSKLLISNLDYGVSDNDIKELFSEFGNLKK 118
Query: 128 YAIHFDKNGRPSVSSVACF 146
++H+D++GR ++ F
Sbjct: 119 GSVHYDRSGRSLGTAEVIF 137
>gi|307200277|gb|EFN80545.1| THO complex subunit 4 [Harpegnathos saltator]
Length = 248
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 75 NFPWQHDLFEDSLRAAGISGI-EVGT-KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHF 132
N W+HD+F D ++ G I VGT KL VSNL GV++ DI+ELFSE G LK A+H+
Sbjct: 73 NSAWKHDMF-DGVKKVGRGAIGNVGTTKLLVSNLDFGVSDSDIQELFSEFGPLKSAAVHY 131
Query: 133 DKNGRPSVSSVACF 146
D++GR S+ F
Sbjct: 132 DRSGRSLGSADVIF 145
>gi|224112811|ref|XP_002316299.1| predicted protein [Populus trichocarpa]
gi|222865339|gb|EEF02470.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 26/153 (16%)
Query: 1 MATHVDMSLDDIIKSRKK-----SERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGP 55
M++ +DMSLDD+I+ K+ S+ A G G GP V RR P
Sbjct: 1 MSSLLDMSLDDLIRKGKENGGRDSDFRGSGRGAGSGSVLGPGPDRLV--------FRRDP 52
Query: 56 LSNARPSSYTIAKSFRRTRNFPWQ-HDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
RP Y++ P Q + ++ L A G KLY+SNL GV+N+D
Sbjct: 53 ---TRPKPYSVR---------PVQVMQVQQEPLMLAASEGSNGEAKLYISNLDYGVSNED 100
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
I+ LFSE+GEL RY++H+D +GR ++ F+
Sbjct: 101 IKVLFSEVGELLRYSLHYDMSGRSKGTAEVVFS 133
>gi|194216535|ref|XP_001489489.2| PREDICTED: THO complex subunit 4-like [Equus caballus]
Length = 207
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 47 MTGAA------RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTK 100
MTGAA RGP S P + +++ + WQHDLF+ E G K
Sbjct: 1 MTGAAGVPGDCARGP-SCGNPYKFLCSRTHPKQLPDKWQHDLFDSGFGGGAGV--ETGGK 57
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 58 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 94
>gi|384246743|gb|EIE20232.1| hypothetical protein COCSUDRAFT_48657 [Coccomyxa subellipsoidea
C-169]
Length = 2303
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 38/177 (21%)
Query: 1 MATHVDMSLDDIIKS---------RKKSERERGQGRARRGRGRGRGPSGSVSGGR----- 46
MA + MSLDDII R K +GR R GR +G+ GR
Sbjct: 1 MADVLSMSLDDIINKNKSKTGGNVRAKDSDGSKRGRDERKNGRKTAKAGTRGEGRTLPID 60
Query: 47 -------MTGAARRGPLSNARPSSYTIAKSFRRTR----------NFPWQHDLFEDSLRA 89
++G ++ G R A R + N W+HDL++D +
Sbjct: 61 SLRVVVKISGVSKAGGSRIGRGQGPRKAMPTREPKAPVDPEVLDGNKKWRHDLYDDLEQG 120
Query: 90 AG-------ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
+ G G +L V+NL GVT+DDI+ELF G++K IH+D++GR +
Sbjct: 121 PPRRNLQHRMRGPADGFRLMVTNLADGVTDDDIKELFESCGKVKYAGIHWDRSGRST 177
>gi|6755763|ref|NP_035698.1| THO complex subunit 4 [Mus musculus]
gi|48474242|sp|O08583.3|THOC4_MOUSE RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=REF1-I; AltName: Full=RNA and export
factor-binding protein 1; AltName: Full=Transcriptional
coactivator Aly/REF
gi|1916290|gb|AAC53117.1| ALY [Mus musculus]
gi|111307348|gb|AAI20589.1| THO complex 4 [Mus musculus]
gi|148702823|gb|EDL34770.1| THO complex 4 [Mus musculus]
gi|187957054|gb|AAI37659.1| THO complex 4 [Mus musculus]
Length = 255
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 71/157 (45%), Gaps = 34/157 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERG------------------QGRARRGRGRGRGPSGSV 42
MA +DMSLDDIIK + RG Q AR RG G
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRG------GGP 54
Query: 43 SGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTK 100
R A RP+ Y+ R + P WQHDLF+ E G K
Sbjct: 55 MRNRPAIARGAAGGGRNRPAPYS------RPKQLPDKWQHDLFDSGFGGGAGV--ETGGK 106
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 107 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 143
>gi|115653040|ref|XP_782040.2| PREDICTED: THO complex subunit 4-A-like [Strongylocentrotus
purpuratus]
Length = 304
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGI--------SGIEVGTKLYVSNLHPGVTNDDIRELF 119
+ R + P WQHD++ + AGI + KL VSNL GV+N+DI ELF
Sbjct: 81 YSRPKQMPDQWQHDMYSEGGAGAGIRRQGAGLTTAANASGKLLVSNLDFGVSNNDIEELF 140
Query: 120 SEIGELKRYAIHFDKNGR 137
++ G LK+ A+H+D+ GR
Sbjct: 141 ADFGSLKKAAVHYDRTGR 158
>gi|256071333|ref|XP_002571995.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|350645138|emb|CCD60146.1| RNA and export factor binding protein, putative [Schistosoma
mansoni]
Length = 213
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 78 WQHDLFEDSLRAAG-ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
WQHD+F+D G +S T+L++SNL GV NDDI ELF E G +++ +H+D++G
Sbjct: 55 WQHDMFQDGRSPKGSVSTGGNATRLHISNLDFGVNNDDINELFREFGAIRKATVHYDRSG 114
Query: 137 RPSVSSVACFATFSPL 152
R ++ F +PL
Sbjct: 115 RSLGTAEVVF--VNPL 128
>gi|195454362|ref|XP_002074207.1| GK12741 [Drosophila willistoni]
gi|194170292|gb|EDW85193.1| GK12741 [Drosophila willistoni]
Length = 280
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLR--AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
AK R N W+HD+++ R AAG S + T+L V NL GV+N DI+ELF++ G
Sbjct: 87 AKFARGDVNSAWKHDMYDGPKRRAAAGGSSLPGPTRLIVGNLDYGVSNMDIKELFNDFGP 146
Query: 125 LKRYAIHFDKNGR 137
+K+ A+H+D++GR
Sbjct: 147 MKKAAVHYDRSGR 159
>gi|256071335|ref|XP_002571996.1| RNA and export factor binding protein [Schistosoma mansoni]
gi|350645137|emb|CCD60145.1| RNA and export factor binding protein, putative [Schistosoma
mansoni]
Length = 155
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 78 WQHDLFEDSLRAAG-ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
WQHD+F+D G +S T+L++SNL GV NDDI ELF E G +++ +H+D++G
Sbjct: 55 WQHDMFQDGRSPKGSVSTGGNATRLHISNLDFGVNNDDINELFREFGAIRKATVHYDRSG 114
Query: 137 RPSVSSVACFAT 148
R ++ F
Sbjct: 115 RSLGTAEVVFVN 126
>gi|157819383|ref|NP_001103072.1| THO complex subunit 4 [Rattus norvegicus]
gi|149055044|gb|EDM06861.1| rCG32827, isoform CRA_a [Rattus norvegicus]
Length = 189
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 77/152 (50%), Gaps = 23/152 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARR----GPL 56
MA +DMSLDDIIK + RG GR R G G G+V AAR GP+
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQA-----AARVNRGGGPM 55
Query: 57 SNARPS---------SYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSN 105
N RP+ + R + P WQHDLF+ E G KL VSN
Sbjct: 56 RN-RPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSN 112
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 113 LDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 144
>gi|148682483|gb|EDL14430.1| mCG1026435 [Mus musculus]
Length = 115
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 21/134 (15%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
++M+L+DIIK K +R R + R RG G P +G R P
Sbjct: 1 MNMTLEDIIKLNKIQQRSRNRPDPRMNRGTG--PKRYRPAITHSGRNRLAP--------- 49
Query: 65 TIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
+RR + P WQHD F R G + ++ G KL +SNLH V++ DI++LF+E
Sbjct: 50 -----YRRPKQLPDKWQHDRFVGGFR--GGNHMDTGGKLLLSNLHYRVSDADIQKLFAEF 102
Query: 123 GELKRYAIHFDKNG 136
G L++ ++H+D++G
Sbjct: 103 GTLRK-SVHYDRSG 115
>gi|221126616|ref|XP_002155396.1| PREDICTED: THO complex subunit 4-like [Hydra magnipapillata]
Length = 244
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 85/169 (50%), Gaps = 22/169 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
+A VD+SLD+II S KKS R +GR +GS GG GP+ N R
Sbjct: 2 VADKVDLSLDEIIASNKKSRGGRSRGRG----------AGSGRGGTSRRGGAGGPIRNTR 51
Query: 61 PS-SYTIAKSFRRTRNFP--WQHDLFEDSL-----RAAGISGIEVGTKLYVSNLHPGVTN 112
TI +RR ++ P W+HD+F+ S G+ GT L +SNL GVT
Sbjct: 52 GGRERTIP--YRRPKSIPERWEHDMFDGSSSRGRSNIGSSDGLVTGTHLQISNLDFGVTE 109
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY 161
DI+ELFSE G LK+ I++D++GR S + F P L LK Y
Sbjct: 110 SDIKELFSEFGNLKKVRINYDESGR-SHGTADVFFERKPDALKA-LKTY 156
>gi|149055045|gb|EDM06862.1| rCG32827, isoform CRA_b [Rattus norvegicus]
Length = 256
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 77/152 (50%), Gaps = 23/152 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARR----GPL 56
MA +DMSLDDIIK + RG GR R G G G+V AAR GP+
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQA-----AARVNRGGGPM 55
Query: 57 SNARPS---------SYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSN 105
N RP+ + R + P WQHDLF+ E G KL VSN
Sbjct: 56 RN-RPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSN 112
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 113 LDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 144
>gi|340371931|ref|XP_003384498.1| PREDICTED: THO complex subunit 4-like [Amphimedon queenslandica]
Length = 246
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 78 WQHDLFEDSLRAAGISGIEV---GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
WQHD+++ + GTKL +SNL GV++DDI+ELF E G L++ +H+DK
Sbjct: 69 WQHDMYQGDFNGSAQVQTPAKSGGTKLLISNLDYGVSDDDIKELFREFGRLRKAEVHYDK 128
Query: 135 NGRPSVSSVACF 146
+GR ++ F
Sbjct: 129 SGRSVGTAQVIF 140
>gi|209736566|gb|ACI69152.1| THO complex subunit 4 [Salmo salar]
gi|223647606|gb|ACN10561.1| THO complex subunit 4 [Salmo salar]
Length = 272
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 79/158 (50%), Gaps = 27/158 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARR------- 53
MA +DMSLDDII+ KK RG R GRG SG GG +G
Sbjct: 1 MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGGSGGRPGGAGSGGRTGGSGPMRS 60
Query: 54 -----GPLSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT------- 99
G S++RP+ Y+ R R P WQHD+FE + G G
Sbjct: 61 RQNFSGDRSDSRPTPYS------RPRELPDKWQHDMFEGGFGSNAGGGGGAGGGGVETGG 114
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 115 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 152
>gi|198455576|ref|XP_001360055.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
gi|198133305|gb|EAL29208.2| GA10707 [Drosophila pseudoobscura pseudoobscura]
Length = 284
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
AK R N W+HD+++ R A SG T L V+NL GV+N DI+ELF+E G +K
Sbjct: 91 AKFARGDVNSAWKHDMYDGPKRGAPSSG-SGPTLLIVNNLDYGVSNSDIKELFNEFGPIK 149
Query: 127 RYAIHFDKNGR 137
+ A+H+D++GR
Sbjct: 150 KAAVHYDRSGR 160
>gi|195158116|ref|XP_002019940.1| GL12678 [Drosophila persimilis]
gi|194116531|gb|EDW38574.1| GL12678 [Drosophila persimilis]
Length = 284
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
AK R N W+HD+++ R A SG T L V+NL GV+N DI+ELF+E G +K
Sbjct: 91 AKFARGDVNSAWKHDMYDGPKRGAPSSG-SGPTLLIVNNLDYGVSNSDIKELFNEFGPIK 149
Query: 127 RYAIHFDKNGR 137
+ A+H+D++GR
Sbjct: 150 KAAVHYDRSGR 160
>gi|194741450|ref|XP_001953202.1| GF17326 [Drosophila ananassae]
gi|190626261|gb|EDV41785.1| GF17326 [Drosophila ananassae]
Length = 275
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P + +K R N W+HD+++ R A +G T+L V NL GV+N DI+ELF+
Sbjct: 78 PGAVQKSKFPRGDVNSAWKHDMYDGPKRGAPGTGP---TRLIVGNLDYGVSNTDIKELFN 134
Query: 121 EIGELKRYAIHFDKNGR 137
+ G +K+ A+H+D++GR
Sbjct: 135 DFGPMKKAAVHYDRSGR 151
>gi|334322981|ref|XP_001370691.2| PREDICTED: THO complex subunit 4-like [Monodelphis domestica]
Length = 459
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 75/153 (49%), Gaps = 24/153 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN-- 58
MA +DMSLDDIIK + RG GR R G G G + + GP+ N
Sbjct: 202 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGAQGGRGGGGAQAAARVSRGGGPIRNRP 261
Query: 59 ------------ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVS 104
RP+ Y+ R + P WQHDLF+ E G KL VS
Sbjct: 262 AMARGGAGGGGRNRPAPYS------RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVS 313
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
NL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 314 NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 346
>gi|241152158|ref|XP_002406835.1| THO complex subunit, putative [Ixodes scapularis]
gi|215493941|gb|EEC03582.1| THO complex subunit, putative [Ixodes scapularis]
Length = 327
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 68 KSFRRTRNFP--WQHDLFED--SLRAAG-ISGIEVG-TKLYVSNLHPGVTNDDIRELFSE 121
+ + R + P WQHD+FE + R G + G G +KL VSNL GV++ DI+ELF+E
Sbjct: 139 QPYARPKELPDRWQHDMFEGVGTRRTLGALGGTTAGPSKLLVSNLDYGVSDADIKELFAE 198
Query: 122 IGELKRYAIHFDKNGR 137
G L++ A+H+D++GR
Sbjct: 199 FGPLRKAAVHYDRSGR 214
>gi|384484326|gb|EIE76506.1| hypothetical protein RO3G_01210 [Rhizopus delemar RA 99-880]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 27/166 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA+ +D +LDD+IK R++ + RR G R +G + R P+ +
Sbjct: 1 MASRLDQALDDVIKDRRRDKHHSN----RRSHGGRRSDTGPIR-------KRSEPVVRSF 49
Query: 61 PSSYTIAKSFRRTR--------NFPWQHDLFEDSL--RAAGIS------GIEVGTKLYVS 104
+ I S +R R N PW HD FED + R + I+ G +L +
Sbjct: 50 IRTMKIQGSSQRGRGAAGGRDVNSPWAHDRFEDDVPQRESFITSRLGPRNDNRGVELSIE 109
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
NLH VT D+ ELFS +G +++ + +D++GR + + +A+ S
Sbjct: 110 NLHYNVTEQDVLELFSTVGPVEKARLFYDRSGRSTGQAKVKYASSS 155
>gi|291223306|ref|XP_002731646.1| PREDICTED: THO complex 4-like [Saccoglossus kowalevskii]
Length = 265
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 23/189 (12%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR-----GRGRGRGPSGSVSGGRMTGAARRGP 55
M +DMSLDDIIK K + R RG+G R G GG + +RG
Sbjct: 1 MGDKIDMSLDDIIKLNKPTGRGRGRGGRGGGSRGGARQFRGGRGAGGRGGPVRRTQQRGA 60
Query: 56 LSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRA-----AGIS--GIEVGTKLYVSNL 106
N RP+ Y+ R + P W+HD+F+ + A IS G KL VSNL
Sbjct: 61 GRN-RPTPYS------RPKELPDSWEHDMFDGGVGLGVGGRALISRDGQSQQGKLLVSNL 113
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE- 165
GV++ DI+ELF++ G LKR A+H+D++GR ++ F + ++ +P +
Sbjct: 114 DFGVSDADIQELFADFGNLKRAAVHYDRSGRSLGTADVIFEKKNDAIKAMKQYNNVPLDG 173
Query: 166 -VMHLQLLS 173
M++QL++
Sbjct: 174 RAMNIQLVT 182
>gi|348558286|ref|XP_003464949.1| PREDICTED: THO complex subunit 4-like [Cavia porcellus]
Length = 364
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ E G KL VSNL GV++ DI+E
Sbjct: 181 RPAPYS------RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQE 232
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 233 LFAEFGTLKKAAVHYDRSGR 252
>gi|405969437|gb|EKC34408.1| THO complex subunit 4-A [Crassostrea gigas]
Length = 305
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGR-----GRGPSGSVSGGRMTGAARRGP 55
M+ +D+SLDDIIK KK G RG G + P G G G RG
Sbjct: 1 MSDKLDLSLDDIIKQNKKKGGRGGGRGGGRGGGGGGGRFNKSPRGGRGRGGNRGGGGRGA 60
Query: 56 LS---NARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIE----------VGTK 100
R +S + F R++ P WQHD+F+ G++ ++ K
Sbjct: 61 FRGGIQKRRASTGRSPQFSRSKEIPDVWQHDMFD-----GGVAPVKRFGGGVGGGSGDGK 115
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L++SNL GV + DI+ELF+E G LK A+H+DK+GR
Sbjct: 116 LHISNLDFGVNDSDIQELFAEFGPLKMAAVHYDKSGR 152
>gi|332849328|ref|XP_001165277.2| PREDICTED: THO complex subunit 4 [Pan troglodytes]
Length = 264
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ E G KL VSNL GV++ DI+E
Sbjct: 80 RPAPYS------RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQE 131
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 132 LFAEFGTLKKAAVHYDRSGR 151
>gi|119610105|gb|EAW89699.1| THO complex 4 [Homo sapiens]
Length = 239
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RP+ Y+ R + P WQHDLF+ E G KL VSNL GV++ DI+E
Sbjct: 55 RPAPYS------RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQE 106
Query: 118 LFSEIGELKRYAIHFDKNGR 137
LF+E G LK+ A+H+D++GR
Sbjct: 107 LFAEFGTLKKAAVHYDRSGR 126
>gi|303288876|ref|XP_003063726.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226454794|gb|EEH52099.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 280
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHD F+ R G G +L VSNLH VTN D++ELF ++G +K+ ++FD+NGR
Sbjct: 68 WQHDRFQGGNRGPRAGGGGGGARLVVSNLHFNVTNADVKELFQQVGAVKKAGLNFDENGR 127
Query: 138 PSVSSVACFAT 148
++ FA+
Sbjct: 128 SKGTAEIIFAS 138
>gi|157108771|ref|XP_001650379.1| RNA and export factor binding protein [Aedes aegypti]
gi|157110681|ref|XP_001651200.1| RNA and export factor binding protein [Aedes aegypti]
gi|108868361|gb|EAT32586.1| AAEL015263-PA [Aedes aegypti]
gi|108879221|gb|EAT43446.1| AAEL005114-PA [Aedes aegypti]
Length = 261
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 42/175 (24%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGP--------------------SG 40
M ++MSLDDIIKS +KS+R G+G + G RG G
Sbjct: 1 MVDKIEMSLDDIIKS-QKSQRGGGRGGLNKSGGPPRGNVNRSRNGGGGGFRQNRGGPMGG 59
Query: 41 SVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLR---------AAG 91
V GR G +R K R N W+HD++E + + G
Sbjct: 60 GVLKGRNRGGIQR------------TTKFSRGDVNSAWKHDMYEGARKNRLLAAAGLGGG 107
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+ G +KL VSNL GV+ DI ELF++ G LK ++H+D++GR ++ F
Sbjct: 108 VGGGLGSSKLMVSNLDFGVSESDINELFADFGPLKSASVHYDRSGRSLGTADVVF 162
>gi|427781753|gb|JAA56328.1| Putative tho complex subunit 4 [Rhipicephalus pulchellus]
Length = 251
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 20/151 (13%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS-NA 59
MA +DMSLDDIIK + R RGRG G + G +
Sbjct: 1 MADKIDMSLDDIIKMNRSQFRTTRGRGRGRGRGAGGFAGRGAARGFGGAGGAVRRGTLRG 60
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISG-----------IEVGTKLYVSNL 106
R A+SF + + P WQHD+++ G+ G +KL VSNL
Sbjct: 61 RVRQQPYARSFTQAKELPDRWQHDMYD------GVGGRRALTGGLGGAGMGPSKLLVSNL 114
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GV++ DI+ELF+E G L++ A+H+D++GR
Sbjct: 115 DYGVSDADIKELFAEFGPLRKAAVHYDRSGR 145
>gi|348521070|ref|XP_003448049.1| PREDICTED: THO complex subunit 4-like [Oreochromis niloticus]
Length = 258
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARR-----GRGRGRGPSGSVSGGRMTGAARRGP 55
M +DMSLDDIIK KK G R R G G + GR + R
Sbjct: 1 MGDKMDMSLDDIIKMSKKGGSGGGGSRGRGTFARAGGSGRGGGPSRPARGRQSNFNR--- 57
Query: 56 LSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT--------KLYVSN 105
N R + YT R R P WQHD+FE+ + + G KL +SN
Sbjct: 58 --NNRSTPYT------RPRELPDKWQHDMFEEHVGGRAGNSGGNGGGNGGGNGGKLLISN 109
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
L GV++ DIRELF+E G LK+ +IH+D++GR ++ F
Sbjct: 110 LDFGVSDSDIRELFAEFGALKKASIHYDRSGRSKGTADVHFVN 152
>gi|346466955|gb|AEO33322.1| hypothetical protein [Amblyomma maculatum]
Length = 202
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 52 RRGPL-SNARPSSYTIAKSFRRTRNFP--WQHDLFED-----SLRAAGISGIEVGTKLYV 103
RRG L AR Y A+ F +T+ P WQHD+++ +L +KL V
Sbjct: 1 RRGTLRGRARQQPY--ARGFTQTKEIPDRWQHDMYDGVGARRALSGGLGGAGMGPSKLLV 58
Query: 104 SNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
SNL GV++ DI+ELF+E G L++ A+H+D++GR
Sbjct: 59 SNLDYGVSDADIKELFAEFGPLRKAAVHYDRSGR 92
>gi|301754193|ref|XP_002912986.1| PREDICTED: THO complex subunit 4-like [Ailuropoda melanoleuca]
Length = 239
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 13/102 (12%)
Query: 46 RMTGAARRGPLSN-ARPSSYTIAKSFRRTRNF---------PWQHDLFEDSLRAAGISGI 95
++T ++ +G + ARP++ +++ F R R+ WQHDLF+
Sbjct: 29 QLTTSSHQGTTTQPARPAAL-VSEGFGRCRHHWSRPKQLPDKWQHDLFDSGFGGGAGV-- 85
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 86 ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 127
>gi|386781883|ref|NP_001247942.1| Aly/REF export factor [Macaca mulatta]
gi|402901381|ref|XP_003913629.1| PREDICTED: THO complex subunit 4 [Papio anubis]
gi|383414993|gb|AFH30710.1| THO complex subunit 4 [Macaca mulatta]
Length = 264
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 142 AAVHYDRSGR 151
>gi|383414995|gb|AFH30711.1| THO complex subunit 4 [Macaca mulatta]
Length = 261
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 142 AAVHYDRSGR 151
>gi|238776833|ref|NP_005773.3| THO complex subunit 4 [Homo sapiens]
Length = 264
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 142 AAVHYDRSGR 151
>gi|332266437|ref|XP_003282213.1| PREDICTED: THO complex subunit 4 isoform 1 [Nomascus leucogenys]
gi|426346309|ref|XP_004040822.1| PREDICTED: THO complex subunit 4 [Gorilla gorilla gorilla]
gi|441676608|ref|XP_004092687.1| PREDICTED: THO complex subunit 4 isoform 2 [Nomascus leucogenys]
gi|410305978|gb|JAA31589.1| THO complex 4 [Pan troglodytes]
Length = 264
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 142 AAVHYDRSGR 151
>gi|297702053|ref|XP_002828006.1| PREDICTED: THO complex subunit 4 [Pongo abelii]
Length = 264
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 84 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 141
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 142 AAVHYDRSGR 151
>gi|297302872|ref|XP_001119635.2| PREDICTED: THO complex subunit 4-like, partial [Macaca mulatta]
Length = 87
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRP 138
AG +G+E G KL VSNL GV++ DIREL +E G LK+ A+H++++GRP
Sbjct: 4 AGGAGVETGGKLLVSNLDFGVSDADIRELLAESGTLKKTAVHYNRSGRP 52
>gi|2896146|gb|AAD09608.1| transcriptional coactivator ALY, partial [Homo sapiens]
Length = 233
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 53 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 110
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 111 AAVHYDRSGR 120
>gi|452821093|gb|EME28127.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 215
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 5 VDMSLDDII-KSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+D SLDD+I + +KKS+ + G+ R+G G SVS GR+ +
Sbjct: 4 LDKSLDDLINEQKKKSKGNKSIGKNRKG-NLGASKKLSVSNGRIGKKRM------GKKMM 56
Query: 64 YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELFSEI 122
I + R W+HD F+ ++G T++ V+NL GVTN DI +LFSE+
Sbjct: 57 MDIDQDISGKR---WRHDKFKSGKSSSGDQPKRNQITRVQVTNLALGVTNKDINDLFSEV 113
Query: 123 GELKRYAIHFDKNGRPS-VSSVACFATFSPL 152
G++++ + FD+NGR + ++ V + S L
Sbjct: 114 GKMRQAFVKFDRNGRSTGIAQVVFYDRASAL 144
>gi|48429165|sp|Q86V81.3|THOC4_HUMAN RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=Transcriptional coactivator Aly/REF;
AltName: Full=bZIP-enhancing factor BEF
gi|30411083|gb|AAH52302.1| THO complex 4 [Homo sapiens]
gi|190689331|gb|ACE86440.1| THO complex 4 protein [synthetic construct]
gi|190690681|gb|ACE87115.1| THO complex 4 protein [synthetic construct]
Length = 257
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 77 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 134
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 135 AAVHYDRSGR 144
>gi|195109702|ref|XP_001999422.1| GI23076 [Drosophila mojavensis]
gi|193916016|gb|EDW14883.1| GI23076 [Drosophila mojavensis]
Length = 277
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 75 NFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
N W+HD+++ R + T+L V NL GV+N DI+ELF++ G +K+ A+H+D+
Sbjct: 95 NSAWKHDMYDGPKRNSSAGNSTGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDR 154
Query: 135 NGR 137
+GR
Sbjct: 155 SGR 157
>gi|78369418|ref|NP_001030494.1| THO complex subunit 4 [Bos taurus]
gi|122145089|sp|Q3T0I4.1|THOC4_BOVIN RecName: Full=THO complex subunit 4; Short=Tho4; AltName: Full=Ally
of AML-1 and LEF-1; AltName: Full=Aly/REF export factor;
AltName: Full=Transcriptional coactivator Aly/REF;
AltName: Full=bZIP-enhancing factor BEF
gi|74267952|gb|AAI02385.1| THO complex 4 [Bos taurus]
gi|296476142|tpg|DAA18257.1| TPA: THO complex subunit 4 [Bos taurus]
Length = 257
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 77 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 134
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 135 AAVHYDRSGR 144
>gi|395533243|ref|XP_003768670.1| PREDICTED: uncharacterized protein LOC100925707 [Sarcophilus
harrisii]
Length = 372
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 202 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 259
>gi|351706421|gb|EHB09340.1| THO complex subunit 4 [Heterocephalus glaber]
Length = 209
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 45 GRMTGAARRGPLSNARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLY 102
GR+ + R AR + + F + + P WQHDLF+ E G KL
Sbjct: 6 GRIWASVRASSSQQARLTGLFLL--FFQPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLL 61
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 62 VSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 96
>gi|357619208|gb|EHJ71878.1| ALY [Danaus plexippus]
Length = 253
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDL---FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
++P++YT R N W+HD+ F D + TKL VSNL GV++ DI
Sbjct: 59 SKPTNYT-----RGDVNSTWKHDMYNDFNDRKIQRSVPLTTGPTKLLVSNLDFGVSDSDI 113
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE--VMHLQLLS 173
+ELFSE G LK A+H+D++GR ++ F + ++ +P + M++QL +
Sbjct: 114 QELFSEFGILKSAAVHYDRSGRSLGTADVLFERRADALKAMKQYNGVPLDGRAMNIQLAT 173
Query: 174 DTIMYCWMENR 184
I E R
Sbjct: 174 SEISTFRNEER 184
>gi|224113443|ref|XP_002332576.1| predicted protein [Populus trichocarpa]
gi|222832914|gb|EEE71391.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
KLY+SNL GV+N+DI+ LFSE+GEL RY++H+D +GR ++ F+
Sbjct: 12 AKLYISNLDYGVSNEDIKVLFSEVGELLRYSLHYDMSGRSKGTAEVVFS 60
>gi|359320220|ref|XP_003639282.1| PREDICTED: THO complex subunit 4-like [Canis lupus familiaris]
Length = 190
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+ R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 77 YSRPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 134
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 135 AAVHYDRSGR 144
>gi|326930798|ref|XP_003211528.1| PREDICTED: THO complex subunit 4-like, partial [Meleagris
gallopavo]
Length = 160
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+G+E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 3 AGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 47
>gi|195036702|ref|XP_001989807.1| GH18594 [Drosophila grimshawi]
gi|193894003|gb|EDV92869.1| GH18594 [Drosophila grimshawi]
Length = 274
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 75 NFPWQHDLFEDSLRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
N W+HD+++ R + G T+L V NL GV+N DI+ELF++ G +K+ A+H+D
Sbjct: 89 NSAWKHDMYDGPKRNGSSTANSAGPTRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYD 148
Query: 134 KNGR 137
++GR
Sbjct: 149 RSGR 152
>gi|193788709|ref|NP_001123294.1| THO complex 4 [Nasonia vitripennis]
Length = 270
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 86/196 (43%), Gaps = 32/196 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQG------------------RARRGRGRGRGPSGSV 42
M ++MSLDDIIK K S G RA RG R P G V
Sbjct: 1 MTAKMEMSLDDIIKQNKTSRPRTGGKRGGGAGGAGRKPAGGSPRRAPASRGGARKPGGGV 60
Query: 43 SGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
M G +R G ++ PS S++R + L + R G S TKL
Sbjct: 61 ----MRGRSRGGITRSSGPSFGRSLPSYKR------EAFLGTSAPRRYGSS--SDATKLI 108
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYM 162
VSNL GVT+ DI ELFSE G LK +H+D++GR S+ F + ++ +
Sbjct: 109 VSNLDFGVTDSDILELFSEFGPLKHAGVHYDRSGRSIGSADLLFERRADAIKAMKQYNGV 168
Query: 163 PEE--VMHLQLLSDTI 176
P + M++QL + I
Sbjct: 169 PLDGREMNIQLATSEI 184
>gi|355754465|gb|EHH58430.1| hypothetical protein EGM_08282, partial [Macaca fascicularis]
Length = 178
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F + + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 1 FLQPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 58
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 59 AAVHYDRSGR 68
>gi|355569026|gb|EHH25307.1| hypothetical protein EGK_09105, partial [Macaca mulatta]
Length = 178
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F + + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 1 FLQPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 58
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 59 AAVHYDRSGR 68
>gi|440897688|gb|ELR49328.1| THO complex subunit 4, partial [Bos grunniens mutus]
Length = 178
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 70 FRRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
F + + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+
Sbjct: 1 FPQPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKK 58
Query: 128 YAIHFDKNGR 137
A+H+D++GR
Sbjct: 59 AAVHYDRSGR 68
>gi|395826774|ref|XP_003786590.1| PREDICTED: THO complex subunit 4 [Otolemur garnettii]
Length = 181
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 13 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 70
>gi|221221906|gb|ACM09614.1| THO complex subunit 4 [Salmo salar]
Length = 263
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 11/84 (13%)
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT---KLYVSNLHPGVTND 113
ARP+ Y+ R + P WQHD++ + A + G KL VSNL GV++
Sbjct: 74 ARPTPYS------RPKQLPDKWQHDMYGNHGFNASVGGGAGVETGGKLLVSNLDFGVSDA 127
Query: 114 DIRELFSEIGELKRYAIHFDKNGR 137
DI+ELF+E G LK+ A+H+D++GR
Sbjct: 128 DIQELFAEFGTLKKAAVHYDRSGR 151
>gi|354469136|ref|XP_003496986.1| PREDICTED: THO complex subunit 4-like [Cricetulus griseus]
Length = 212
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 43 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 100
>gi|34810642|pdb|1NO8|A Chain A, Solution Structure Of The Nuclear Factor Aly Rbd Domain
Length = 106
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 72 RTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A
Sbjct: 2 RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAA 59
Query: 130 IHFDKNGR 137
+H+D++GR
Sbjct: 60 VHYDRSGR 67
>gi|157311703|ref|NP_001098578.1| THO complex subunit 4 [Danio rerio]
gi|156230508|gb|AAI51965.1| Zgc:171753 protein [Danio rerio]
Length = 280
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 17/90 (18%)
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT---------KLYVSNLH 107
+RP+ Y+ R + P WQHDLF++ + G G KL VSNL
Sbjct: 80 SRPAPYS------RPKQLPDKWQHDLFDNGYSSNAGGGGGGGGGGAGVETGGKLLVSNLD 133
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 134 FGVSDADIQELFAEFGTLKKAAVHYDRSGR 163
>gi|281348647|gb|EFB24231.1| hypothetical protein PANDA_000701 [Ailuropoda melanoleuca]
Length = 175
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 9 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 66
>gi|410982020|ref|XP_003997362.1| PREDICTED: THO complex subunit 4 [Felis catus]
Length = 220
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 50 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 107
>gi|355724133|gb|AES08120.1| THO complex subunit 4 [Mustela putorius furo]
Length = 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 8 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 65
>gi|344250156|gb|EGW06260.1| THO complex subunit 4 [Cricetulus griseus]
Length = 187
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 11 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 68
>gi|410902089|ref|XP_003964527.1| PREDICTED: THO complex subunit 4-A-like [Takifugu rubripes]
Length = 265
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 26/133 (19%)
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT-----------KLYVSN 105
RP+ Y+ R + P WQHD+F++ G SG KL VSN
Sbjct: 71 GRPTPYS------RPKQLPDKWQHDMFDN-----GFSGFNGVASGGGAGVETGGKLLVSN 119
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE 165
L GV++ DI+ELF+E G LK+ A+H+D++GR ++ F + ++ +P +
Sbjct: 120 LDFGVSDADIQELFAEFGILKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIPLD 179
Query: 166 --VMHLQLLSDTI 176
M++QL++ I
Sbjct: 180 GRPMNIQLVTSQI 192
>gi|359546173|pdb|3ULH|A Chain A, Crystal Structure Of A Rna Binding Domain Of Tho Complex
Subunit 4 Protein (Thoc4) From Homo Sapiens At 2.54 A
Resolution
Length = 107
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 72 RTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
R + P WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A
Sbjct: 3 RPKQLPDKWQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAA 60
Query: 130 IHFDKNGR 137
+H+D++GR
Sbjct: 61 VHYDRSGR 68
>gi|431908644|gb|ELK12236.1| Rho GDP-dissociation inhibitor 1, partial [Pteropus alecto]
Length = 413
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 8 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 65
>gi|302804362|ref|XP_002983933.1| hypothetical protein SELMODRAFT_119349 [Selaginella moellendorffii]
gi|300148285|gb|EFJ14945.1| hypothetical protein SELMODRAFT_119349 [Selaginella moellendorffii]
Length = 85
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ +E+G K+Y+SNL TN+D++ELFSEIGELK + +H DK G ++ FA
Sbjct: 3 VIDLEIGNKIYISNLDEYATNEDLQELFSEIGELKSWRVHRDKLGNSRGTAEVVFA 58
>gi|348533153|ref|XP_003454070.1| PREDICTED: THO complex subunit 4-like [Oreochromis niloticus]
Length = 278
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSL-------RAAGISGIEVGTKLYVSNLHPGV 110
RP+ Y+ R + P WQHD+F++ G +G+E G KL VSNL GV
Sbjct: 76 RPTPYS------RPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLLVSNLDFGV 129
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGR 137
++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 130 SDADIQELFAEFGTLKKAAVHYDRSGR 156
>gi|432868529|ref|XP_004071583.1| PREDICTED: THO complex subunit 4-A-like [Oryzias latipes]
Length = 268
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 60 RPSSYTIAKSFRRTRNFP--WQHDLFEDSL-------RAAGISGIEVGTKLYVSNLHPGV 110
RP+ Y+ R + P WQHD+F++ G +G+E G KL VSNL GV
Sbjct: 74 RPTPYS------RPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLLVSNLDFGV 127
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGR 137
++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 128 SDADIQELFAEFGTLKKAAVHYDRSGR 154
>gi|313224640|emb|CBY20431.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 71 RRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
RR+R+ P W HD++ KL VSNL GV+++D+RELF+E G LK+
Sbjct: 69 RRSRDLPDKWDHDMYSGGRGRGDRGARSSTAKLSVSNLDFGVSDEDMRELFAEFGALKKS 128
Query: 129 AIHFDKNGRPSVSSVACF 146
I +D++GR + + F
Sbjct: 129 QILYDRSGRSTGQAEVEF 146
>gi|395518324|ref|XP_003763313.1| PREDICTED: THO complex subunit 4-like, partial [Sarcophilus
harrisii]
Length = 266
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 1 MATHVDMSLDDIIK---SRKKSERERGQGRARRGRGRG-RGPSGSVSGGRMTGAARR--- 53
MA +DMSLDDIIK S++ + R R G G +G AAR+
Sbjct: 7 MANKMDMSLDDIIKFNRSQRDGCDGDQDQDQDQDRKRSWAGAHGGRNGRSAQIAARQRQG 66
Query: 54 -GPLSN----------ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
GP+ N RP+ Y+ K Q DLF+ G G+E GTKL
Sbjct: 67 GGPILNRQAMVRGGGRNRPAPYSPPKQLPDK----GQPDLFDSGFLGGGGPGLETGTKLL 122
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+SNL GV + DI+ELF G LK+ A+H+D++G
Sbjct: 123 ISNLDCGVLDADIQELFGAFGTLKKAAVHYDRSG 156
>gi|313224645|emb|CBY20436.1| unnamed protein product [Oikopleura dioica]
Length = 248
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 71 RRTRNFP--WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
RR+R+ P W HD++ KL VSNL GV+++D+RELF+E G LK+
Sbjct: 69 RRSRDLPDKWDHDMYSGGRGGGDRGARSSTAKLSVSNLDFGVSDEDMRELFAEFGALKKS 128
Query: 129 AIHFDKNGRPSVSSVACF 146
I +D++GR + + F
Sbjct: 129 QILYDRSGRSTGQAEVEF 146
>gi|397522269|ref|XP_003831197.1| PREDICTED: THO complex subunit 4 [Pan paniscus]
Length = 113
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
WQHDLF+ E G KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 11 WQHDLFDSGFGGGAGV--ETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 68
>gi|21901961|dbj|BAC05519.1| putative TCF coactivator [Ciona savignyi]
Length = 248
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 1 MATHVDMSLDDIIKSRKKSE-RERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA 59
MA +D+SLDDIIK KK++ G+GR R GRG G VS R G
Sbjct: 1 MADKLDLSLDDIIKINKKTKTGGTGRGRGGRRGGRGGASRGGVSQARNKRGGGGGTRGRG 60
Query: 60 RPSS---YTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIE-----VGTKLYVSNLHPGVT 111
R S+ YT K R W+HD+++ A SG++ VG KL VSNL V+
Sbjct: 61 RGSARQPYTRGKIPDR-----WEHDMYKGKSAGAVRSGVDTRGGGVG-KLLVSNLDYAVS 114
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+ DI ELFSE G L++ A+H+D+ GR S+ F
Sbjct: 115 DSDITELFSEFGALRKSAVHYDRTGRSLGSADVHF 149
>gi|443688940|gb|ELT91463.1| hypothetical protein CAPTEDRAFT_161051 [Capitella teleta]
Length = 161
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
G KL VSNL GV + DIRELF+E G LK+ AIH+D++GR ++ F S ++
Sbjct: 6 GGKLLVSNLEFGVNDADIRELFAEFGHLKKAAIHYDRSGRSIGTAEIIFELRSDAVKAMK 65
Query: 158 LKWYMPEE--VMHLQLLSD 174
+P + M +QL+SD
Sbjct: 66 QYNNVPLDGRPMKIQLVSD 84
>gi|302754628|ref|XP_002960738.1| hypothetical protein SELMODRAFT_402061 [Selaginella moellendorffii]
gi|300171677|gb|EFJ38277.1| hypothetical protein SELMODRAFT_402061 [Selaginella moellendorffii]
Length = 395
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ +E+G K+Y+SNL TN+D++ELFSEIGELK + +H DK G ++ FA
Sbjct: 3 VIDLEIGNKIYISNLDEYATNEDLQELFSEIGELKSWRVHRDKLGNSRGTAEVVFA 58
>gi|47219626|emb|CAG02671.1| unnamed protein product [Tetraodon nigroviridis]
Length = 265
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 15/88 (17%)
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFEDSLRA-------AGISGIEVGTKLYVSNLHPG 109
RP+ Y+ R + P WQHD+F++ G +G+E G KL VSNL G
Sbjct: 71 GRPTPYS------RPKQLPDKWQHDMFDNGFNGFNSVAGGGGGAGVETGGKLLVSNLDFG 124
Query: 110 VTNDDIRELFSEIGELKRYAIHFDKNGR 137
V++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 125 VSDADIQELFAEFGILKKAAVHYDRSGR 152
>gi|339241051|ref|XP_003376451.1| THO complex subunit 4 [Trichinella spiralis]
gi|316974832|gb|EFV58304.1| THO complex subunit 4 [Trichinella spiralis]
Length = 199
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R WQHD F ++ G + +L VSNL+ VTNDD++ELF +G +++ A+H
Sbjct: 24 RGRRGRWQHDKFH-AINGFGGKSLAAPAQLLVSNLNFNVTNDDVKELFQGMGAVRKAAVH 82
Query: 132 FDKNGR 137
+D+ GR
Sbjct: 83 YDERGR 88
>gi|240849363|ref|NP_001155655.1| THO complex subunit 4 [Acyrthosiphon pisum]
gi|239788274|dbj|BAH70825.1| ACYPI006176 [Acyrthosiphon pisum]
Length = 265
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 75 NFPWQHDLFEDSLRAAGISGIEVGT--KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHF 132
N W HD++E R G+ K+ +SNL GVT+ DI+ELF E G LK +H+
Sbjct: 81 NGSWTHDMYEGPKRQQMRGGLSTTNIHKIVISNLDFGVTSTDIQELFDEFGPLKTATVHY 140
Query: 133 DKNGRPSVSSVACFATFSPLFLWVQLKWYMPEE--VMHLQLLSDTIMYCWMENR 184
D++GR ++ F + + V+ +P + M ++L +D + R
Sbjct: 141 DRSGRSLGTADVVFDSKNAALKAVRQYNNVPLDGRPMKIELATDLSTVANLATR 194
>gi|209733738|gb|ACI67738.1| THO complex subunit 4 [Salmo salar]
gi|303667317|gb|ADM16268.1| THO complex subunit 4 [Salmo salar]
Length = 267
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 14/87 (16%)
Query: 59 ARPSSYTIAKSFRRTRNFP--WQHDLFED------SLRAAGISGIEVGTKLYVSNLHPGV 110
ARP+ Y+ R + P WQHD++ + + G +G+E G KL VSNL GV
Sbjct: 75 ARPTPYS------RPKQLPDKWQHDMYGNHGFNASVGGSGGGAGVETGGKLLVSNLDFGV 128
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGR 137
++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 129 SDADIQELFAEFGTLKKAAVHYDRSGR 155
>gi|302836664|ref|XP_002949892.1| hypothetical protein VOLCADRAFT_90392 [Volvox carteri f.
nagariensis]
gi|300264801|gb|EFJ48995.1| hypothetical protein VOLCADRAFT_90392 [Volvox carteri f.
nagariensis]
Length = 343
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 78 WQHDLFEDSLRAAGISGIEVG--TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
WQHD++ D + + + TKL V+NLH V+ DD+ ELFS G +K AI++D +
Sbjct: 151 WQHDMYADDYQPPRRAPVPTAPSTKLIVTNLHHQVSEDDLLELFSTCGTVKSKAINYDNS 210
Query: 136 GRPSVSSVACFAT 148
GR S F T
Sbjct: 211 GRSLGSGWVVFET 223
>gi|321472744|gb|EFX83713.1| hypothetical protein DAPPUDRAFT_301602 [Daphnia pulex]
Length = 250
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGR------GRGPSGSVSGGRMTGAARRG 54
M VDMSLDDIIK+ + + R RG R G R G GP + G G R
Sbjct: 1 MGDKVDMSLDDIIKTNRSAGRGRGGRGGRGGSSRGGNRNAGSGPVRNQRQGNAGG--RAA 58
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAG-------ISGIEVGTKLYVSNLH 107
P + P W HD++E R + + +KL VSNL
Sbjct: 59 PYAKGNPDGD-------------WSHDMYEGGPRKSNPRLGAAPNAAGGGSSKLVVSNLD 105
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GV++ DI+ELF E G LK ++H+D++GR
Sbjct: 106 FGVSDADIKELFMEFGPLKHASVHYDRSGR 135
>gi|315049755|ref|XP_003174252.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
gi|311342219|gb|EFR01422.1| RNA binding domain-containing protein [Arthroderma gypseum CBS
118893]
Length = 328
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 66/164 (40%), Gaps = 43/164 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R S R RG GRMTG RR + S+
Sbjct: 1 MDQSLDEIISERPNSSRPRG--------------------GRMTGPRRRPNFRD----SH 36
Query: 65 TIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHP 108
++ R + W HD FED + G K+ VSN+H
Sbjct: 37 KPSRGDRADLDLDWVHDRFEDDRDTRSSRPPRQPRTDRYNSGPADQDSRGAKIRVSNIHY 96
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+T +D+ ELF+ IG + A+ +D+ GR S F T+ L
Sbjct: 97 DLTQEDLEELFTRIGPVHSVALLYDRAGR---SEGTAFVTYKRL 137
>gi|91090428|ref|XP_971598.1| PREDICTED: similar to RNA and export factor binding protein
[Tribolium castaneum]
gi|270013379|gb|EFA09827.1| hypothetical protein TcasGA2_TC011974 [Tribolium castaneum]
Length = 234
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 75 NFPWQHDLFE-----DSLRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
N W+HDLFE A + VG TKL V NL V++ DI+ELF+E G LK
Sbjct: 65 NSAWKHDLFEGYGPRKVAAARAVVQSNVGPTKLMVGNLDFAVSDSDIQELFAEFGPLKSA 124
Query: 129 AIHFDKNGR 137
++H+D++GR
Sbjct: 125 SVHYDRSGR 133
>gi|221222184|gb|ACM09753.1| THO complex subunit 4 [Salmo salar]
Length = 214
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 78 WQHDLFEDSLRAAGISGIEVGT---KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
WQHD++ + A + G KL VSNL GV++ DI+ELF+E G LK+ A+H+D+
Sbjct: 40 WQHDMYGNHGFNASVGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR 99
Query: 135 NGR 137
+GR
Sbjct: 100 SGR 102
>gi|260801421|ref|XP_002595594.1| hypothetical protein BRAFLDRAFT_200539 [Branchiostoma floridae]
gi|229280841|gb|EEN51606.1| hypothetical protein BRAFLDRAFT_200539 [Branchiostoma floridae]
Length = 236
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 40/149 (26%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M +DMSLDDIIK K P G G A
Sbjct: 1 MTDKMDMSLDDIIKLNK--------------------PGRGGRGRGGGRGRGGGRGRGAT 40
Query: 61 PSSYTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGI----------EVGTKLYVSNLHP 108
P + R ++ P WQHD+F+ + A G G KL +SNL
Sbjct: 41 P--------YSRPQSMPDVWQHDMFDGGVGAGGARRAPQLGGGGTGISTGGKLLISNLDF 92
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 93 GVSDADIKELFAEFGNLKKAAVHYDRSGR 121
>gi|290561543|gb|ADD38172.1| RNA and export factor-binding protein 2 [Lepeophtheirus salmonis]
Length = 228
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
KL++ NLH GV+++DI+ELFSE G +K+ A+H+DK+GR ++ F + +
Sbjct: 67 KLHILNLHFGVSDNDIKELFSEFGVIKKSAVHYDKSGRSLGTAEVIFVSLA 117
>gi|156364503|ref|XP_001626387.1| predicted protein [Nematostella vectensis]
gi|156213261|gb|EDO34287.1| predicted protein [Nematostella vectensis]
Length = 169
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 65/154 (42%), Gaps = 27/154 (17%)
Query: 4 HVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+DMSLDDIIK KKS R RG GR G R R P S
Sbjct: 5 QLDMSLDDIIKQNKKSSRGGRGRGGSRGPGRRGGGPVGRGRTRGN---RSTPYS------ 55
Query: 64 YTIAKSFRRTRNFP--WQHDLFEDSLRAAGISGIEVGT--------KLYVSNLHPGVTND 113
R R P WQHD F+ G KL +SNL GV++
Sbjct: 56 --------RPRELPDRWQHDKFDGRGSGGRSFSGGSGGAGGISTGSKLSISNLDFGVSDS 107
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
DI ELFSE G++KR +H+D +GR ++ F
Sbjct: 108 DISELFSEFGQVKRSCVHYDASGRSHGTAKVVFV 141
>gi|332372959|gb|AEE61621.1| unknown [Dendroctonus ponderosae]
Length = 426
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG-------IEVGTKLYVSNLHPGVTND 113
P+S K F RT N + D +D + GI I VG ++ VSNLHP VT D
Sbjct: 266 PASRVALKGFSRTSNVHSRLDGNQDQFNSHGIMSDIKTKVVIPVGHRIVVSNLHPSVTED 325
Query: 114 DIRELFSEIGEL 125
DI+ELF + G+L
Sbjct: 326 DIKELFEDKGQL 337
>gi|395512174|ref|XP_003760319.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4-like
[Sarcophilus harrisii]
Length = 331
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 1 MATHVDMSLDDIIK---SRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLS 57
MA +DMSLD+IIK S++ + +G SG ++ RGP+
Sbjct: 73 MAXEMDMSLDNIIKLNGSQRGRCGGGQGQGRGQAGAQGGCGSGQQVAAHISRG--RGPIQ 130
Query: 58 NARPSSYTIAKSFRRTRNFPWQHDLFEDS------LRAAGISGIEVGTKLYVSNLHPGVT 111
N R + A R + P+ L + S + G G+E G KL +S L GV+
Sbjct: 131 NRRAMTGGGAGGGGRNQPAPYSXGLPDKSDHNMPHSGSGGGPGVETGAKLLISTLDCGVS 190
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGR 137
+ DI+ELF+ G K+ A+H+D + R
Sbjct: 191 DADIQELFAAFGTXKKAAVHYDPSSR 216
>gi|198424321|ref|XP_002131960.1| PREDICTED: similar to putative TCF coactivator [Ciona intestinalis]
Length = 256
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +D+SLDDIIK KK++ G+GR R GR G + G G AR
Sbjct: 1 MADKLDLSLDDIIKINKKTKTGGGRGRGGRRGGR----GGGGATGGGVGQARNKRGGGRG 56
Query: 61 PSSYTIAKSFRRTRNFP---WQHDLFEDSL----RAAGISGIEVGT-----KLYVSNLHP 108
+S+ R + P W+HD++++ RA G +E + KL V+NL
Sbjct: 57 RGRGNPRQSYTRGK-MPADRWEHDMYKNGKPGRGRARGAGTMETRSTGGIGKLLVTNLDF 115
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
V++ DI ELFSE G L++ A+H+D++GR S+ F
Sbjct: 116 AVSDSDITELFSEFGALRKSAVHYDRSGRSLGSADVHF 153
>gi|326437919|gb|EGD83489.1| hypothetical protein PTSG_04097 [Salpingoeca sp. ATCC 50818]
Length = 281
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 3 THVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPS 62
+ VDMSLD +I+ + ++ER+ RGRGRG S S R + RR +
Sbjct: 2 SKVDMSLDALIE-QDRAERQTRGRGRGGRRGRGRGRGASSSRPRTQDSRRRN-------A 53
Query: 63 SYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
YT R RN +QHD + + + KL V NL GVT DI +LF I
Sbjct: 54 PYT----SRSPRNQFYQHDSRAFAAPMSAPAPTPRSAKLLVENLDYGVTESDIEQLFGAI 109
Query: 123 GELKRYAIHFDKNGR 137
G+L Y+IH+D+ GR
Sbjct: 110 GQLVDYSIHYDRAGR 124
>gi|408388313|gb|EKJ67999.1| hypothetical protein FPSE_11810 [Fusarium pseudograminearum CS3096]
Length = 357
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSV--SGGRMTGAARRG--PL 56
MA +D LD+II +S R R RG+GR R P G R R P
Sbjct: 1 MADKMDRGLDEIIAD-TRSNRPRNS----RGQGRRREPRNDFPRDGVRKVDFPRSPMMPT 55
Query: 57 SNARPSSYTI-----AKSFR---RTRNFPWQHDLFEDSLRAAGISGIEV---------GT 99
+PSS I A S R R + W HD FE++ + GT
Sbjct: 56 RPVQPSSQLILSMLGALSVRDDSRNIDSEWVHDRFEENNNRRAPAPRRRRESPEQDSKGT 115
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
K+ V N+H +T+DD+ ELF IG + R + +D+ GR S + T+
Sbjct: 116 KIRVDNIHYDLTDDDLSELFQRIGPISRLQLRYDRAGR---SEGTAYVTY 162
>gi|326479299|gb|EGE03309.1| RNA binding domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 297
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 43/164 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R S R RG GRM G+ RR +N R S+
Sbjct: 1 MDQSLDEIIAERPDSSRPRG--------------------GRMAGSRRR---TNFR-GSH 36
Query: 65 TIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHP 108
++ R + W HD FED + G K+ VSN+H
Sbjct: 37 KPSRGDRADLDLDWVHDRFEDDRDSRSSRPPRQPRTDRYNSGPADQDSRGAKIRVSNIHY 96
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+T +D+ ELF+ IG + ++ +D+ GR S F T+ L
Sbjct: 97 DLTQEDLEELFTRIGPVYSVSLLYDRAGR---SEGTAFVTYKRL 137
>gi|326469195|gb|EGD93204.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 327
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R S R RG GRM G+ RR +N R S+
Sbjct: 1 MDQSLDEIIAERPDSSRPRG--------------------GRMAGSRRR---TNFR-GSH 36
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRA---------------AGISGIEV-GTKLYVSNLHP 108
++ R + W HD FED + +G + + G K+ VSN+H
Sbjct: 37 KPSRGDRADLDLDWVHDRFEDDRDSRSSRPPRQPRTDRYNSGPADQDSRGAKIRVSNIHY 96
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+T +D+ ELF+ IG + ++ +D+ GR S F T+ L
Sbjct: 97 DLTQEDLEELFTRIGPVYSVSLLYDRAGR---SEGTAFVTYKRL 137
>gi|357503111|ref|XP_003621844.1| THO complex subunit [Medicago truncatula]
gi|355496859|gb|AES78062.1| THO complex subunit [Medicago truncatula]
Length = 315
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
TKLY+SNL V+N+DI LFSE GEL+ Y+IH+D+ GR ++ F
Sbjct: 75 TKLYLSNLDDRVSNEDIHLLFSEEGELESYSIHYDQFGRSKGTAEVVFT 123
>gi|170043665|ref|XP_001849498.1| RNA and export factor binding protein [Culex quinquefasciatus]
gi|167867015|gb|EDS30398.1| RNA and export factor binding protein [Culex quinquefasciatus]
Length = 290
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSV------SGG--------R 46
M ++MSLDDIIKS K G+G + R G SGG R
Sbjct: 1 MVDKIEMSLDDIIKSSKPQRGAGGRGGVNKNGAGPRTGGGRGGPPRNGSGGGGFRQNLNR 60
Query: 47 MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRA-------------AGIS 93
G G L + +K R N W+HD++E + ++ G
Sbjct: 61 SGGGGGGGVLKGRQRGGIQRSKYARGDVNSAWKHDMYEGARKSRLLAAAGLGGGLGGGGP 120
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G TKL VSNL GV+ DI ELF++ G LK ++H+D++GR ++ F
Sbjct: 121 GGLGSTKLMVSNLDFGVSESDINELFADFGPLKSASVHYDRSGRSLGTADVVF 173
>gi|430812736|emb|CCJ29857.1| unnamed protein product [Pneumocystis jirovecii]
Length = 237
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 44/158 (27%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
++ SLDDII RK S R RR NAR + Y
Sbjct: 3 LEKSLDDIINDRKISRNSRTSD----------------------WILRRRFFKNARLAPY 40
Query: 65 TIAKSF-RRTRNFPWQHDLFEDSLRAAGISGIEVG---TKLY------------VSNLHP 108
+ +F +R N PW HDL+E G++ VG +LY + NLH
Sbjct: 41 YKSINFYKRNYNEPWTHDLYE------GLAEKPVGRISKQLYRPPSKGLSYRVKIENLHY 94
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+T DD+ LF +IG + + +I +D++GR + ++ F
Sbjct: 95 ELTEDDLNGLFKKIGPVTKLSIKYDRSGRSTGTAYVNF 132
>gi|239611834|gb|EEQ88821.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 350
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG-----------PSGSVSGGRMTGAARR 53
+D SLD+II R S R + + R RR G PS V ++ +
Sbjct: 1 MDRSLDEIIAERPPSNRGQARNRPRRSNAPRNGVKKVLLLFLSHPSRIVKADKLPACSS- 59
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---------------IEVG 98
SS I W HD FED G + G
Sbjct: 60 --------SSQAIGD---------WVHDKFEDDRNTPSYRGSRARRLDRYSPEPEQPQTG 102
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
KL V+NLH +T DD+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 103 AKLRVTNLHYDLTEDDLEDLFTRIGPINALSLRYDRAGR---SEGVAFVTYKRLV 154
>gi|261201622|ref|XP_002628025.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590122|gb|EEQ72703.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 350
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG-----------PSGSVSGGRMTGAARR 53
+D SLD+II R S R + + R RR G PS V ++ +
Sbjct: 1 MDRSLDEIIAERPSSNRGQARNRPRRSNAPRNGVKKVLLLFLSHPSRIVKADKLPACSS- 59
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---------------IEVG 98
SS I W HD FED G + G
Sbjct: 60 --------SSQAIGD---------WVHDKFEDDRNTPSYRGSRARRLDRYSPEPEQPQTG 102
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
KL V+NLH +T DD+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 103 AKLRVTNLHYDLTEDDLEDLFTRIGPINALSLRYDRAGR---SEGVAFVTYKRLV 154
>gi|327352914|gb|EGE81771.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 313
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRG-----------PSGSVSGGRMTGAARR 53
+D SLD+II R S R + + R RR G PS V ++ +
Sbjct: 1 MDRSLDEIIAERPSSNRGQARNRPRRSNAPRNGVKKVLLLFLSHPSRIVKADKLPACSS- 59
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG---------------IEVG 98
SS I W HD FED G + G
Sbjct: 60 --------SSQAIGD---------WVHDKFEDDRNTPSYRGSRARRLDRYSPEPEQPQTG 102
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
KL V+NLH +T DD+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 103 AKLRVTNLHYDLTEDDLEDLFTRIGPINALSLRYDRAGR---SEGVAFVTYKRLV 154
>gi|7159943|emb|CAB76383.1| RNA and export factor binding protein 1-II [Mus musculus]
Length = 163
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
KL VSNL GV++ DI+ELF+E G LK+ A+H+D++GR
Sbjct: 14 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGR 51
>gi|255575082|ref|XP_002528446.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223532122|gb|EEF33929.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 149
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
E KLY+SNL V++ DI+ LFS++GEL+ ++H+DK+GR ++ FA
Sbjct: 62 ESEAKLYISNLDYDVSSKDIKLLFSDVGELRSQSVHYDKSGRSKGTAEVVFA 113
>gi|67901438|ref|XP_680975.1| hypothetical protein AN7706.2 [Aspergillus nidulans FGSC A4]
gi|40742031|gb|EAA61221.1| hypothetical protein AN7706.2 [Aspergillus nidulans FGSC A4]
gi|259484052|tpe|CBF79945.1| TPA: RNA binding protein, putative (AFU_orthologue; AFUA_5G08310)
[Aspergillus nidulans FGSC A4]
Length = 328
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 50/165 (30%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + R+ RG+ RGP G R G
Sbjct: 1 MDRSLDEIIAERPQ----------RQNRGQNRGPRNQ--GRRSNG--------------- 33
Query: 65 TIAKSFRRTR---NFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSN 105
+ K +R R + W HD +ED + GT+L + N
Sbjct: 34 -VKKPYRDERVDLDLDWVHDKYEDDRDTRPSRGGRRPRVDRYSPSPDRSASAGTRLRIEN 92
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
LH +T D+ ELFS IG + ++ +D+ GR S + T+S
Sbjct: 93 LHYDITETDLEELFSRIGPISNVSLVYDRAGR---SEGVAYVTYS 134
>gi|38048103|gb|AAR09954.1| similar to Drosophila melanogaster aly, partial [Drosophila yakuba]
Length = 164
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T+L V NL GV+N DI+ELF++ G +K+ A+H+D++GR
Sbjct: 7 TRLIVGNLDYGVSNTDIKELFNDFGPMKKAAVHYDRSGR 45
>gi|336375402|gb|EGO03738.1| hypothetical protein SERLA73DRAFT_175356 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388461|gb|EGO29605.1| hypothetical protein SERLADRAFT_457577 [Serpula lacrymans var.
lacrymans S7.9]
Length = 240
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 68 KSFRRTRNF--PWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
K + R RN PW HD S AA I TKL VSNLH +T D+ +F +IG L
Sbjct: 11 KPYSRPRNSDGPWLHDRAPLSSLAAAIP-TSANTKLVVSNLHYEITPKDLVSIFGQIGTL 69
Query: 126 KRYA-IHFDKNGRPSVSSVACFAT 148
R I +D++GR S + F T
Sbjct: 70 VREPLIRYDRSGRSSGVAYVSFET 93
>gi|119183879|ref|XP_001242919.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 1048
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 68/169 (40%), Gaps = 47/169 (27%)
Query: 4 HVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
++D SLD+II R + + RGR R A RRG S
Sbjct: 731 NMDRSLDEIIAERPRY--------SNRGRTR-------------QSAGRRGNFSR---DE 766
Query: 64 YTIAKSFRRTR---NFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYV 103
+ KSFR R W HD FED R A G G KL V
Sbjct: 767 ARVHKSFRNDRADVELDWVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKLRV 826
Query: 104 SNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+NLH +T +D+R LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 827 NNLHYDITEEDLRGLFTGIGPILSLSLVYDRAGR---SEGVAFVTYKRL 872
>gi|328860189|gb|EGG09296.1| hypothetical protein MELLADRAFT_71269 [Melampsora larici-populina
98AG31]
Length = 218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 29/137 (21%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A ++D LDDII ++K + R ARRG G+ +G + GR T RP
Sbjct: 3 AMNLDRPLDDIISEKRK--QRRPAAVARRG-GKANHTTGPIRHGRTT----------TRP 49
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS- 120
+A + P Q + G+K+ VSNL VT + IRELFS
Sbjct: 50 QPVAMAAPAAKILQLPAQ---------------MGQGSKIIVSNLPTDVTENQIRELFST 94
Query: 121 EIGELKRYAIHFDKNGR 137
+G + + A+ +D G+
Sbjct: 95 TVGPVMKVALSYDNRGQ 111
>gi|158286924|ref|XP_309011.3| AGAP006733-PA [Anopheles gambiae str. PEST]
gi|157020700|gb|EAA04421.3| AGAP006733-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGP-------------SGSVSGGR- 46
M ++MSLD+IIKS+K + G GRA R P +G SGG+
Sbjct: 1 MVDKIEMSLDEIIKSQKSTRPRGGGGRAGGAGRSNRRPGAGSGGASGGGARNGFRSGGQR 60
Query: 47 -MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLR--------AAGISGIEV 97
+ G L T A+ R N W+HD++E + G G
Sbjct: 61 NGGVSGGGGVLKGRTRGGITRARYGRGDVNSAWKHDMYEGPRKNRLLAAAGGLGAGGPGG 120
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
KL VSNL GV+ DI ELF+E G L+ ++H+D++GR
Sbjct: 121 AAKLLVSNLDFGVSETDINELFAEFGPLRSASVHYDRSGR 160
>gi|403160007|ref|XP_003320572.2| hypothetical protein PGTG_02594 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169372|gb|EFP76153.2| hypothetical protein PGTG_02594 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 221
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 30/136 (22%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
A ++D LDDII ++K + G G ARRG GR G +G V GR A R P+
Sbjct: 4 AMNLDRPLDDIISDKRKQHKRPG-GIARRG-GRTNG-TGPVRNGR---APRAQPVV---- 53
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-S 120
+ + AKS + P Q + G+K+ VSNL VT + IRELF +
Sbjct: 54 APVSTAKSLQ----LPPQ---------------MGQGSKIIVSNLPSDVTENQIRELFNT 94
Query: 121 EIGELKRYAIHFDKNG 136
+G + R + +D G
Sbjct: 95 TVGHVTRVTLSYDNRG 110
>gi|392865823|gb|EAS31661.2| RNA binding protein [Coccidioides immitis RS]
Length = 317
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 67/169 (39%), Gaps = 47/169 (27%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + + RGR R A RRG S
Sbjct: 1 MDRSLDEIIAERPRY--------SNRGRTR-------------QSAGRRGNFSR---DEA 36
Query: 65 TIAKSFRRTR---NFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYVS 104
+ KSFR R W HD FED R A G G KL V+
Sbjct: 37 RVHKSFRNDRADVELDWVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKLRVN 96
Query: 105 NLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
NLH +T +D+R LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 97 NLHYDITEEDLRGLFTGIGPILSLSLVYDRAGR---SEGVAFVTYKRLV 142
>gi|321477188|gb|EFX88147.1| hypothetical protein DAPPUDRAFT_221355 [Daphnia pulex]
Length = 386
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E G ++YVSNLHP VT +DI ELF ++G L R ++ RP V+ V L
Sbjct: 255 ETGHRIYVSNLHPKVTQEDIVELFGDVGSLVRASLQ-----RPGVAEVVYVRRDDALRAV 309
Query: 156 VQLKWYMPEEVMHLQLLSDTIMYCWM 181
+V H + L M+C M
Sbjct: 310 ---------DVYHNRQLDGLPMHCSM 326
>gi|121713216|ref|XP_001274219.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119402372|gb|EAW12793.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 332
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 48/165 (29%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + + +GR +G+G+GR G
Sbjct: 1 MDRSLDEIIAERPNQNQNQNRGRRPQGQGQGRRRDG------------------------ 36
Query: 65 TIAKSFRRTR---NFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSN 105
+ KS++ R + W HD +ED AG G+K+ V N
Sbjct: 37 -VKKSYKEERVDLDLDWVHDRYEDDRDTRPARAPRRPRGDRYSPAGEHSA-TGSKIRVEN 94
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
LH +T D+ +LF+ IG + ++ +D+ GR S + T++
Sbjct: 95 LHYDITESDLEDLFTRIGPITNLSLVYDRAGR---SEGVAYVTYN 136
>gi|443690305|gb|ELT92473.1| hypothetical protein CAPTEDRAFT_222506 [Capitella teleta]
Length = 242
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLK 159
KL VSNL GV + D++ELF+E G +K+ A+H D++G ++ F + ++
Sbjct: 92 KLLVSNLDFGVDDADVKELFAEFGRIKKAAVHHDRSGCSMGTAEVIFDSRDNAVKAIKKY 151
Query: 160 WYMPEE--VMHLQLLSD 174
+P + M +Q++SD
Sbjct: 152 NNVPLDGRAMKIQMVSD 168
>gi|195578775|ref|XP_002079239.1| GD22109 [Drosophila simulans]
gi|194191248|gb|EDX04824.1| GD22109 [Drosophila simulans]
Length = 210
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ + MSLDDII + K + + R G R P SGG + G R +R
Sbjct: 1 MSDKMKMSLDDIIMMQSKKNKFINTKKGRVQGGSIRKPK---SGGGLRGIQR------SR 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ I KS NF +H L S T + V NL GV +DDI ELF+
Sbjct: 52 NGTGFIQKS-----NFKQEHALKPPSR----------PTFVMVCNLDYGVDDDDIMELFN 96
Query: 121 EIGELKRYAIHFDKNG 136
+ G +++ +H+D+NG
Sbjct: 97 QDGLVEKALVHYDRNG 112
>gi|326437638|gb|EGD83208.1| hypothetical protein PTSG_03838 [Salpingoeca sp. ATCC 50818]
Length = 245
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 34/103 (33%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDS----------------------LRAAGIS---- 93
RP T RT WQHDLF+ L AA IS
Sbjct: 71 RPRRGTPRSPGARTMPDKWQHDLFQGGRTQPAPRVARGAAHSSDLREMLLPAANISTTGT 130
Query: 94 --------GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
G+ GTKL V+NL VT +D+RELF E G LKR
Sbjct: 131 LAKKLGSNGLTTGTKLLVTNLESSVTKEDMRELFQECGPLKRV 173
>gi|452981093|gb|EME80853.1| hypothetical protein MYCFIDRAFT_124169, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 488
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E ++V NL +NDD+ ELFS IGE+ R I ++ NGR S V FA
Sbjct: 385 SGGEQSATIHVKNLPWSTSNDDLNELFSTIGEVVRAEIQYEPNGRSRGSGVVQFAA 440
>gi|443706027|gb|ELU02304.1| hypothetical protein CAPTEDRAFT_48713, partial [Capitella teleta]
Length = 151
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLK 159
KL VSNL GV + D++ELF+E G +K+ +H D++G ++ F + ++
Sbjct: 2 KLLVSNLDFGVVDADVKELFAEFGRIKKAVVHHDRSGCSMGTAEVIFDSRDNAVKAIKKY 61
Query: 160 WYMPEE--VMHLQLLSDTIM 177
+P + M +Q++SD ++
Sbjct: 62 NNVPLDGRAMKIQMVSDGVL 81
>gi|346972077|gb|EGY15529.1| hypothetical protein VDAG_06693 [Verticillium dahliae VdLs.17]
Length = 1082
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 82 LFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+F D RA G ++ G +L+V+NL P VT D++RE+FS+IG ++R +I +K G+
Sbjct: 746 MFSDPSRAKKRDGAVDEGRELHVTNLDPVVTEDELREVFSKIGPVQRVSIPRNKGGK 802
>gi|330793081|ref|XP_003284614.1| hypothetical protein DICPUDRAFT_75578 [Dictyostelium purpureum]
gi|325085413|gb|EGC38820.1| hypothetical protein DICPUDRAFT_75578 [Dictyostelium purpureum]
Length = 294
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G++L +SNLH +T +D+R +F +IGE+K I++D++GR S F+
Sbjct: 206 TGSRLNISNLHHAITINDLRLVFEKIGEIKTIKINYDRSGRSEGSGYVVFS 256
>gi|303320077|ref|XP_003070038.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109724|gb|EER27893.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 316
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 41/166 (24%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II R + + RGR R A RRG S +
Sbjct: 1 MDRSLDEIIAERPRY--------SNRGRTR-------------QSAGRRGNFSRDEARVH 39
Query: 65 TIAKSFRRTRNFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYVSNLH 107
++ R W HD FED R A G G KL V+NLH
Sbjct: 40 KFFRNDRADVELDWVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKLRVNNLH 99
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
+T +D+R LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 100 YDITEEDLRGLFTGIGPILSLSLVYDRAGR---SEGVAFVTYKRLV 142
>gi|341878276|gb|EGT34211.1| CBN-ALY-2 protein [Caenorhabditis brenneri]
Length = 228
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNA-R 60
A+ +DM+L DII S KKSER++G G+ P V+GG +RG SNA
Sbjct: 4 ASSIDMALSDIISS-KKSERKKG----------GKKPIKRVTGG----IRKRGSTSNAGT 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P + R F D + +L +SNL V + D+ ELF
Sbjct: 49 PRRQSGGGGRGGARKFTTSSGGLND----------KRTVRLNISNLARSVMSSDLEELFQ 98
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWY----MPEEVMHLQLL 172
+ L++ ++HF ++G PS ++ + L +K Y + ++VMH ++
Sbjct: 99 DF-NLRKVSVHFGEDGTPSGTADIILSKRDADRL---VKDYAGVLLDQKVMHFAII 150
>gi|367019886|ref|XP_003659228.1| hypothetical protein MYCTH_2055144 [Myceliophthora thermophila ATCC
42464]
gi|347006495|gb|AEO53983.1| hypothetical protein MYCTH_2055144 [Myceliophthora thermophila ATCC
42464]
Length = 351
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 66 IAKSFR----RTRNFPWQHDLFED--SLRAA-------GISGIEVGTKLYVSNLHPGVTN 112
+ KSFR R + W HD FED + R+A + GTKL V NLH +T
Sbjct: 39 VRKSFRDDAPRNLDSEWVHDKFEDYGTRRSAPRRRYSPEPTSETRGTKLRVDNLHYELTQ 98
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+D+ +LFS IG L + +D+ GR S F T+
Sbjct: 99 EDLEDLFSRIGPLISLEMKYDRAGR---SEGTAFVTY 132
>gi|393243627|gb|EJD51141.1| hypothetical protein AURDEDRAFT_111799 [Auricularia delicata
TFB-10046 SS5]
Length = 257
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 24/138 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M++ +D SLDD+I +K++ RRGR RG +G+ G + GA R S
Sbjct: 1 MSSALDKSLDDMIVDKKRNR------APRRGRST-RGSTGTT--GAVAGATARTRYSGIL 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
PSS N + + +G E K+ VSNL P V I+ELFS
Sbjct: 52 PSS-----------NGNIAAKQAAAAAQVQSSAGAE---KIIVSNLPPDVNEAQIKELFS 97
Query: 121 -EIGELKRYAIHFDKNGR 137
+G LK +HFD++G+
Sbjct: 98 TTVGPLKEVNLHFDQHGK 115
>gi|402083585|gb|EJT78603.1| hypothetical protein GGTG_03702 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 327
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 66 IAKSFR---RTRNFPWQHDLFED------------SLRAAGISGIEVGTKLYVSNLHPGV 110
+ KS+R R + W HD F+D + A SG GTK+ V N+H +
Sbjct: 54 VRKSYRDEPRNLDSEWVHDKFDDNDSRRGRLPRRRAESAEQESGGPKGTKIRVDNIHYEL 113
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
T +D++ LF+ IG ++ + +D++GR ++ + ++ L V+
Sbjct: 114 TEEDLQGLFNGIGPIRELDLVYDRSGRSEGTAYVVYESYKDATLAVK 160
>gi|295657714|ref|XP_002789423.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283845|gb|EEH39411.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 333
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 22/103 (21%)
Query: 66 IAKSFRRTR---NFPWQHDLFED------SLRAAGISGIE----------VGTKLYVSNL 106
+ K FR R + W HD FED S+R + ++ G K+ V+NL
Sbjct: 35 VKKPFRTERANLDLDWVHDKFEDDRDTRPSIRGSRAPRLDRYSPEREQFQTGAKIRVTNL 94
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
H +T DD+ +LF+ IG + ++ +D+ GR S F T+
Sbjct: 95 HYDLTEDDLEDLFTRIGPISALSLLYDRAGR---SEGVAFVTY 134
>gi|226286952|gb|EEH42465.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 333
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 66 IAKSFRRTR---NFPWQHDLFED------SLRAAGISGIE----------VGTKLYVSNL 106
+ K FR R + W HD FED S+R + ++ G K+ V+NL
Sbjct: 35 VKKPFRTERANLDLDWVHDKFEDDRDTRPSIRGSRAPRLDRYSPEREQFQTGAKIRVTNL 94
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
H +T DD+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 95 HYDLTEDDLEDLFTRIGPISALSLLYDRAGR---SEGVAFVTYKRL 137
>gi|444517170|gb|ELV11398.1| THO complex subunit 4 [Tupaia chinensis]
Length = 190
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RP+ Y+ ++ R R QH L D G G L +SNLHP V++ DI+ LF
Sbjct: 4 RPAPYSRSRRLRDQR----QH-LVADRGFGDGAGAQSRGQLLLLSNLHPSVSDRDIQMLF 58
Query: 120 SEIGEL-KRYAIHFDKNG 136
E G L K+ A+H+D +G
Sbjct: 59 GEFGALQKQAAVHYDGSG 76
>gi|443690307|gb|ELT92475.1| hypothetical protein CAPTEDRAFT_40457, partial [Capitella teleta]
Length = 151
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLK 159
KL VSNL GV + D++ELF++ G +K+ +H D++G ++ F + ++
Sbjct: 2 KLLVSNLDFGVDDADVKELFADFGRIKKAVVHHDRSGCSMGTAEVIFDSRDNAVKAIKKY 61
Query: 160 WYMPEE--VMHLQLLSDTIM 177
+P + M +Q++SD ++
Sbjct: 62 NNVPLDGRAMKIQMVSDGVL 81
>gi|340520210|gb|EGR50447.1| predicted protein [Trichoderma reesei QM6a]
Length = 323
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
Query: 66 IAKSFR---RTRNFPWQHDLFEDSL----------RAAGISGIEV-GTKLYVSNLHPGVT 111
+ KS R R + W HD +E++ R SG +V GT+L V N+H +T
Sbjct: 42 VKKSLRNEPRNLDSEWVHDRYEENTYRQRGPAPRRRRESPSGGDVRGTRLRVENIHYDLT 101
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+D+ ELF IG + + + +D++GR S F T+
Sbjct: 102 EEDLDELFRRIGPITKLQLRYDRSGR---SEGVAFVTY 136
>gi|46949206|gb|AAT07459.1| cap-binding protein [Mirabilis jalapa]
Length = 147
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE++L+ + T LY+ N+ T + + ELFS +GE+K+ +
Sbjct: 15 RDRRFPGNQEEFEEALKKS--------TTLYIGNMSFYTTEEQVYELFSRVGEIKKITMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFVLY 82
>gi|171687535|ref|XP_001908708.1| hypothetical protein [Podospora anserina S mat+]
gi|170943729|emb|CAP69381.1| unnamed protein product [Podospora anserina S mat+]
Length = 334
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 66 IAKSFR----RTRNFPWQHDLFED--SLRAAG-------ISGIEVGTKLYVSNLHPGVTN 112
+ KSFR R + W HD +ED S R+A SG G+K+ V N+H +T
Sbjct: 64 VRKSFRDEAPRNLDTEWVHDRYEDHGSRRSAPRRRNSNEYSGDSRGSKVRVDNIHYELTQ 123
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+++ LFS IG L + + +D+ GR S F T+
Sbjct: 124 EELEGLFSSIGPLVKLEMKYDRAGR---SEGTAFVTY 157
>gi|425766493|gb|EKV05102.1| Small subunit of nuclear cap-binding protein complex [Penicillium
digitatum Pd1]
gi|425775339|gb|EKV13617.1| Small subunit of nuclear cap-binding protein complex [Penicillium
digitatum PHI26]
Length = 197
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 60 RPSSYTIAKSFRRTRN-----FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
RPS+Y ++K+ RR N P Q + +D L+ A T LYV NL T +
Sbjct: 14 RPSAYYVSKNKRRRFNDRDEEEPQQQEKADDKLKNA--------TTLYVGNLSFYTTEEQ 65
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
I ELF++ GE+KR + D+ + CF +
Sbjct: 66 IHELFAKCGEVKRLVMGLDRFNKTPCG--FCFVEY 98
>gi|226897447|gb|ACO90183.1| nuclear cap-binding protein 20 [Nicotiana tabacum]
Length = 171
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L A T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDALLKA--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF F
Sbjct: 67 LDKNCKTPCG--FCFVMF 82
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE S++ A + G LY+ NL G+T+D +RELFS G++ I D+NG VS
Sbjct: 191 FEQSMKDA--ADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNG---VSK 245
Query: 143 VACFATFS 150
+ F +FS
Sbjct: 246 GSGFVSFS 253
>gi|221132363|ref|XP_002166508.1| PREDICTED: uncharacterized protein LOC100205695 [Hydra
magnipapillata]
Length = 273
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI 130
+ K+ VSNLHP VT+DDI+ELF +G+L+R ++
Sbjct: 157 LAAKVVVSNLHPNVTDDDIKELFGVLGDLRRASL 190
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE S++ A + G LY+ NL G+T+D +RELFS G++ I D+NG VS
Sbjct: 390 FEQSMKDA--ADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNG---VSK 444
Query: 143 VACFATFS 150
+ F +FS
Sbjct: 445 GSGFVSFS 452
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE S++ A + G LY+ NL G+T+D +RELFS G++ I D+NG VS
Sbjct: 390 FEQSMKDA--ADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNG---VSK 444
Query: 143 VACFATFS 150
+ F +FS
Sbjct: 445 GSGFVSFS 452
>gi|403173210|ref|XP_003332304.2| hypothetical protein PGTG_14600 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170176|gb|EFP87885.2| hypothetical protein PGTG_14600 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 303
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
Query: 72 RTRNFPWQHDLFED--------------SLRAAGISGIEVG--TKLYVSNLHPGVTNDDI 115
R N W+HDLFE+ ++ A G ++ G T L ++NLH V+ ++
Sbjct: 30 RQTNDSWKHDLFENGDTKASSNPPRQLRTVDAPGDEEVDQGRSTSLLITNLHYDVSEAEL 89
Query: 116 RELFSEIGELKRYA-IHFDKNGR 137
LFS+IG+L R I FD++GR
Sbjct: 90 EALFSQIGKLDRGPFIKFDQSGR 112
>gi|380096102|emb|CCC06149.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 335
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 66 IAKSFR----RTRNFPWQHDLFEDS--------LRAAGISGIEVGTKLYVSNLHPGVTND 113
+ KSFR R + W HD FE++ ++ +S G+K+ V N+H +T +
Sbjct: 53 VRKSFRDDAPRNLDSEWVHDKFEENDRRRAPRRRQSPELSSDPRGSKIRVDNIHYELTQE 112
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF-SPLFLWVQLKWY 161
D+ LFS IG L + + +D+ GR S F T+ SP ++ Y
Sbjct: 113 DLEGLFSRIGPLVKLDMKYDRAGR---SEGTAFVTYESPQDASRAIREY 158
>gi|313224644|emb|CBY20435.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G K+ + NL GVT+DD+++LF E G +KR ++ F+ +G+ + S+ F
Sbjct: 97 GCKIIIDNLDFGVTDDDMKDLFEEFGNIKRVSVLFNSHGKSTGSAEIVF 145
>gi|312379595|gb|EFR25817.1| hypothetical protein AND_08500 [Anopheles darlingi]
Length = 836
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 75 NFPWQHDLFE----------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
N W+HD++E + A TKL VSNL GV+ DI ELF+E G
Sbjct: 654 NSAWKHDMYEGARGKSSRLLTTAGIATGGLGGGITKLMVSNLDFGVSETDINELFAEFGP 713
Query: 125 LKRYAIHFDKNGR 137
LK ++H+D++GR
Sbjct: 714 LKSASVHYDRSGR 726
>gi|119480671|ref|XP_001260364.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
gi|119408518|gb|EAW18467.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
Length = 196
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 60 RPSSYTIAKSFRRT---------RNFPWQHDL----FEDSLRAAG-ISGIEVGTKLYVSN 105
RPS+Y +AK +T R+F WQ+ +DS RA + ++ T LYV N
Sbjct: 14 RPSAYYLAKVRLKTAFGFDHFLIRSFGWQNKKRKYSQDDSERAEDPVDKLKDATTLYVGN 73
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
L T + I ELFS+ GE+KR + D+ + CF +
Sbjct: 74 LSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCG--FCFVEY 115
>gi|258570675|ref|XP_002544141.1| hypothetical protein UREG_03658 [Uncinocarpus reesii 1704]
gi|237904411|gb|EEP78812.1| hypothetical protein UREG_03658 [Uncinocarpus reesii 1704]
Length = 1075
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 35/164 (21%)
Query: 18 KSERERGQGRARRGR---GRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTI------AK 68
++ R+RG + G G+GRG G+ ++ +A+ SN S+ + +
Sbjct: 748 QTYRDRGNRSSHSGLPFLGKGRGFMGASC---LSFSAKYSSRSNFDTSANLVLLLLIEQQ 804
Query: 69 SFRRTR---NFPWQHDLFEDS--LRAAGISGIEV---------------GTKLYVSNLHP 108
SFR R W HD FED R A G G KL V+NLH
Sbjct: 805 SFRNDRADVELDWVHDKFEDDRDTRPASFRGSNSRRNGRLSPPPEQSTSGAKLRVNNLHY 864
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+T +D+ +LF+ IG + +I +D+ GR S F T+ L
Sbjct: 865 DITENDLEDLFTRIGPILSRSILYDRAGR---SEGIAFVTYKRL 905
>gi|313224639|emb|CBY20430.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G K+ + NL GVT+DD+++LF E G +KR ++ F+ +G+ + S+ F
Sbjct: 97 GCKIIIDNLDFGVTDDDMKDLFEEFGNIKRVSVLFNSHGKSTGSAEIVF 145
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 66 IAKSFRRTRNFPWQHDLFEDSLRAAGISG----IEVG-TKLYVSNLHPGVTNDDIRELFS 120
+ KS +N W L AAG++G + VG KLYV+NL+ + D+++LF+
Sbjct: 77 MVKSSEHEKNLAWVSTYLASLLGAAGVTGPNDTLPVGPCKLYVANLNAAIAEADVQQLFA 136
Query: 121 EIGELKRYAIHFDKNGR 137
G++ + D GR
Sbjct: 137 PFGQIDNVQLVRDATGR 153
>gi|195351085|ref|XP_002042067.1| GM26087 [Drosophila sechellia]
gi|194123891|gb|EDW45934.1| GM26087 [Drosophila sechellia]
Length = 207
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++MSLDDII + K + R G R P SGG + G + ++R
Sbjct: 1 MSDKMNMSLDDIIMMQSKKNKFINTKNGRVQGGSIRKPK---SGGGLRG------IQSSR 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ I KS F +H L S T + V NL GV +DDI ELF+
Sbjct: 52 NGTGFIQKS-----KFKQEHALKPPS----------KPTFVMVCNLDYGVDDDDIMELFN 96
Query: 121 EIGELKRYAIHFDKNG 136
+ G +++ +H+D+NG
Sbjct: 97 QDGLVEKALVHYDRNG 112
>gi|225558206|gb|EEH06490.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 395
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 68 KSFRRTR---NFPWQHDLFED------SLRAAGISGI----------EVGTKLYVSNLHP 108
+ FR R + W HD FED S R + + + G KL VSNLH
Sbjct: 103 QPFRTERANLDLDWVHDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHY 162
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+T DD+ +LF+ IG + ++ +D+ GR S F T+
Sbjct: 163 DLTEDDLEDLFTRIGPISALSLRYDRAGR---SEGIAFVTY 200
>gi|154285798|ref|XP_001543694.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407335|gb|EDN02876.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 395
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 22/105 (20%)
Query: 68 KSFRRTR---NFPWQHDLFEDSLR----------------AAGISGIEVGTKLYVSNLHP 108
+ FR R + W HD FED + + G KL VSNLH
Sbjct: 103 QPFRTERANLDLDWVHDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHY 162
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLF 153
+T DD+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 163 DLTEDDLEDLFTRIGPISALSLRYDRAGR---SEGIAFVTYKRLV 204
>gi|327308762|ref|XP_003239072.1| hypothetical protein TERG_08678 [Trichophyton rubrum CBS 118892]
gi|326459328|gb|EGD84781.1| hypothetical protein TERG_08678 [Trichophyton rubrum CBS 118892]
Length = 361
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E G +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 246 GGERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDT 300
>gi|358391435|gb|EHK40839.1| hypothetical protein TRIATDRAFT_28798 [Trichoderma atroviride IMI
206040]
Length = 326
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 67 AKSFRRTRNFPWQHDLFEDSL-----------RAAGISGIEVGTKLYVSNLHPGVTNDDI 115
++S R + W HD +E++ R + G GT+L V N+H +T +D+
Sbjct: 46 SRSEPRNLDSEWVHDRYEENTYRNSRAAPRRRRDSPSGGDARGTRLRVENIHYDLTEEDL 105
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELF IG + + + +D++GR S F T+
Sbjct: 106 DELFRRIGPISKLQLRYDRSGR---SEGVAFVTY 136
>gi|194769432|ref|XP_001966808.1| GF19217 [Drosophila ananassae]
gi|190618329|gb|EDV33853.1| GF19217 [Drosophila ananassae]
Length = 497
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G + + G +L VSNLH VT DIRELF++IG + Y H RP + V + T
Sbjct: 381 GAANNKAGYRLLVSNLHANVTTADIRELFNDIGPM--YDAHV---VRPGTAEV-IYKTLE 434
Query: 151 PLFLWVQLKWYMPEEVMHLQLLSDTIMYCWMEN 183
+ V E H + D M+C + N
Sbjct: 435 HAEMAV--------EAYHHREFDDQPMHCVLVN 459
>gi|451850516|gb|EMD63818.1| hypothetical protein COCSADRAFT_91061 [Cochliobolus sativus ND90Pr]
Length = 168
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS---GIEVGTKLYVSNLHPGVTNDDIR 116
+PSSY AK RR RN D RA S ++ T LYV NL T + I
Sbjct: 13 KPSSYATAKKRRRDRNT-------RDEERARSPSPEDKLKDATTLYVGNLSFYTTEEQIH 65
Query: 117 ELFSEIGELKRYAIHFDK 134
ELFS+ GE+KR + D+
Sbjct: 66 ELFSKCGEIKRLVMGLDR 83
>gi|358055279|dbj|GAA98735.1| hypothetical protein E5Q_05423 [Mixia osmundae IAM 14324]
Length = 243
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 23/139 (16%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++D LD +I ++K+ R ++RG GRGP + G GAA P + R
Sbjct: 1 MSMNIDQPLDTVIAEKRKNNR------SKRG---GRGPRNTAGTG---GAAPSAPSARDR 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGI-SGIEVGTKLYVSNLHPGVTNDDIRELF 119
+ A + + + + A G+ SG++ G K+ VSNL VT + IRELF
Sbjct: 49 YAGSAPASNKQAAKG--------QTGSGAVGLPSGLD-GHKIIVSNLPDDVTENQIRELF 99
Query: 120 SE-IGELKRYAIHFDKNGR 137
S +G K ++ +D G+
Sbjct: 100 SSTVGPCKSVSLSYDSKGK 118
>gi|240277162|gb|EER40671.1| alpha-actinin [Ajellomyces capsulatus H143]
Length = 1058
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 19/98 (19%)
Query: 71 RRTRNFPWQHDLFED------SLRAAGISGI----------EVGTKLYVSNLHPGVTNDD 114
R + W HD FED S R + + + G KL VSNLH +T DD
Sbjct: 100 RANLDLDWVHDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHYDLTEDD 159
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 160 LEDLFTRIGPISALSLRYDRAGR---SEGIAFVTYKRL 194
>gi|70992519|ref|XP_751108.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66848741|gb|EAL89070.1| RNP domain protein [Aspergillus fumigatus Af293]
Length = 480
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E G +YV NL NDD+ +LFS IG+++R I ++ NGR + V F
Sbjct: 371 SGGEKGPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQF 424
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 222 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 273
>gi|325093985|gb|EGC47295.1| alpha-actinin [Ajellomyces capsulatus H88]
Length = 1058
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 68 KSFRRTRNFPWQHDLFED------SLRAAGISGI----------EVGTKLYVSNLHPGVT 111
++ R + W HD FED S R + + + G KL VSNLH +T
Sbjct: 97 RTERANLDLDWVHDKFEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHYDLT 156
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
DD+ +LF+ IG + ++ +D+ GR S F T+ L
Sbjct: 157 EDDLEDLFTRIGPISALSLRYDRAGR---SEGIAFVTYKRL 194
>gi|159124680|gb|EDP49798.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 480
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E G +YV NL NDD+ +LFS IG+++R I ++ NGR + V F
Sbjct: 371 SGGEKGPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQF 424
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 222 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 273
>gi|315054029|ref|XP_003176389.1| hypothetical protein MGYG_00478 [Arthroderma gypseum CBS 118893]
gi|311338235|gb|EFQ97437.1| hypothetical protein MGYG_00478 [Arthroderma gypseum CBS 118893]
Length = 435
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E G +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 320 GGERGISIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDT 374
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++YV+NL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 163 QIYVANLPYNVGWQDLKDLFRQATQQGAVVRADVHMDASGRPKGSGIVAFES 214
>gi|66809087|ref|XP_638266.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466704|gb|EAL64755.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 327
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
G++L +SNLH ++ D++ LF +GE+K+ IH+D +GR
Sbjct: 239 TGSRLNISNLHHAISEADLKVLFDSLGEIKQIKIHYDHSGR 279
>gi|340905027|gb|EGS17395.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 327
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 66/164 (40%), Gaps = 41/164 (25%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLD+I+ RKK+ RG RG G+ R G
Sbjct: 1 MSNILDRSLDEILADRKKNNFNRGS----------RG--GASRRRERDDRPRDG------ 42
Query: 61 PSSYTIAKSFR----RTRNFPWQHDLFEDS-----------LRAAGISGIEVGTKLYVSN 105
+ KSFR R + W HD FED R+ + GTKL V N
Sbjct: 43 -----VRKSFRDDEPRNLDSEWVHDKFEDDSGRRPAASKGRRRSPEPNSDPRGTKLRVDN 97
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
LH +T D+ LFS IG + + +D+ GR S F T+
Sbjct: 98 LHYELTQQDLEGLFSRIGPVISVHLKYDRAGR---SEGVAFVTY 138
>gi|452000551|gb|EMD93012.1| hypothetical protein COCHEDRAFT_1097649 [Cochliobolus
heterostrophus C5]
Length = 168
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIREL 118
+PSSY AK RR RN ED R+ ++ T LYV NL T + I EL
Sbjct: 13 KPSSYATAKKRRRDRNTRD-----EDRARSPSPEDKLKDATTLYVGNLSFYTTEEQIHEL 67
Query: 119 FSEIGELKRYAIHFDK 134
FS+ GE+KR + D+
Sbjct: 68 FSKCGEIKRLVMGLDR 83
>gi|326477774|gb|EGE01784.1| RNP domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 307
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E G +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 231 GGERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDT 285
>gi|342890180|gb|EGU89044.1| hypothetical protein FOXB_00456 [Fusarium oxysporum Fo5176]
Length = 317
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 33/159 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
MA +D LD+II + + + R RG+GR R P P R
Sbjct: 1 MADKMDRGLDEIIADTRAN-----RPRNHRGQGRRREPRNDY------------PRDGVR 43
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEV---------GTKLYVSNLHPGVT 111
S +++ + W HD FE++ + G KL V N+H +T
Sbjct: 44 KSVRDDSRNL----DSEWVHDRFEENNNRRAPAPRRRRESPDQESKGAKLRVDNIHYDLT 99
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
+D+ ELF IG + R + +D+ GR S + T+
Sbjct: 100 EEDLDELFRRIGPVVRLQLRYDRAGR---SEGTAYVTYE 135
>gi|327293694|ref|XP_003231543.1| hypothetical protein TERG_07841 [Trichophyton rubrum CBS 118892]
gi|326466171|gb|EGD91624.1| hypothetical protein TERG_07841 [Trichophyton rubrum CBS 118892]
Length = 338
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 63/167 (37%), Gaps = 40/167 (23%)
Query: 5 VDMSLDDIIKSRKKSERERG---QGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
+D SLD+II R + R RG G RR RG G RR +R
Sbjct: 1 MDQSLDEIIAERPDASRPRGGRMAGSRRRNNFRGS----------HKGCKRRTVSRKSRL 50
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDS----------------LRAAGISGIEVGTKLYVSN 105
Y W HD FED + G K+ VSN
Sbjct: 51 MGYVFGSD--------WVHDRFEDDRDSRSSRPPRQPRTDRYNSGPADHDSRGAKIRVSN 102
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
+H +T +D+ ELF+ IG + ++ +D+ GR S F T+ L
Sbjct: 103 IHYDLTQEDLEELFTRIGPVYSVSLLYDRAGR---SEGTAFVTYKRL 146
>gi|46124955|ref|XP_387031.1| hypothetical protein FG06855.1 [Gibberella zeae PH-1]
Length = 323
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 78 WQHDLFEDSLRAAGISGIEV---------GTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
W HD FE++ + GTK+ V N+H +T+DD+ ELF IG + R
Sbjct: 57 WVHDRFEENNNRRAPAPRRRRESPEQDSKGTKIRVDNIHYDLTDDDLSELFQRIGPISRL 116
Query: 129 AIHFDKNGRPSVSSVACFATF 149
+ +D+ GR S + T+
Sbjct: 117 QLRYDRAGR---SEGTAYVTY 134
>gi|395325535|gb|EJF57956.1| hypothetical protein DICSQDRAFT_91511 [Dichomitus squalens LYAD-421
SS1]
Length = 253
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 78 WQHD-------LFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA- 129
W HD +++ A +G+ T++ VSNLH VT D+ ++F +IG L R
Sbjct: 29 WLHDRAPGVPRAVQNTASAKATNGV-TNTRIIVSNLHYEVTPKDLSQIFGQIGTLVREPQ 87
Query: 130 IHFDKNGRPSVSSVACFAT 148
I +D++GR S +V F T
Sbjct: 88 IRYDRSGRSSGVAVITFET 106
>gi|302656180|ref|XP_003019846.1| hypothetical protein TRV_06134 [Trichophyton verrucosum HKI 0517]
gi|291183618|gb|EFE39222.1| hypothetical protein TRV_06134 [Trichophyton verrucosum HKI 0517]
Length = 276
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E G +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 161 GGERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDT 215
>gi|224460055|gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum]
gi|261866539|gb|ACY02034.1| cap binding protein 20 [Nicotiana tabacum]
Length = 254
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L A T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDALLKA--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF F
Sbjct: 67 LDKNCKTPCG--FCFVMF 82
>gi|195481481|ref|XP_002101663.1| GE15488 [Drosophila yakuba]
gi|194189187|gb|EDX02771.1| GE15488 [Drosophila yakuba]
Length = 472
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G S + G +L VSNLH VT DIRELFS+IG + Y H RP + V
Sbjct: 356 GTSNSKGGYRLLVSNLHANVTTADIRELFSDIGPM--YDAHV---VRPGTAEV------- 403
Query: 151 PLFLWVQLKWY-MPEEVMHLQLLSDTIMYCWMEN 183
++ L+ M + H + D M+C + N
Sbjct: 404 ---IYKSLEHAEMAVDAYHHREFDDQPMHCVLVN 434
>gi|389747630|gb|EIM88808.1| hypothetical protein STEHIDRAFT_145663 [Stereum hirsutum FP-91666
SS1]
Length = 271
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 68 KSFRRTRNFPWQHDLFEDS-----LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI 122
K+ R+ + W HDL ED+ A + + T+L VSN+H +T D+ +F +I
Sbjct: 9 KTVTRSTDDIWVHDLAEDAKTSRPTPTAPAAAVAANTRLAVSNVHYEITEKDLTAIFGQI 68
Query: 123 GELKRYA-IHFDKNGRPSVSSVACFATFS 150
G L R I +D++GR + ++ F T S
Sbjct: 69 GTLVREPLIKYDRSGRSTGVAIIAFETAS 97
>gi|302497555|ref|XP_003010778.1| hypothetical protein ARB_03480 [Arthroderma benhamiae CBS 112371]
gi|291174321|gb|EFE30138.1| hypothetical protein ARB_03480 [Arthroderma benhamiae CBS 112371]
Length = 298
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E G +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 183 GGERGVSIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEPNGRSRGTGVVQFDT 237
>gi|358377715|gb|EHK15398.1| hypothetical protein TRIVIDRAFT_38353 [Trichoderma virens Gv29-8]
Length = 324
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 17/98 (17%)
Query: 66 IAKSFR---RTRNFPWQHDLFEDSL----------RAAGISGIEV-GTKLYVSNLHPGVT 111
+ KS R R + W HD +E++ R SG E G +L V N+H +T
Sbjct: 43 VKKSLRNEPRNLDSEWVHDRYEENTYRNRGPAPRRRRESPSGGEARGARLRVENIHYDLT 102
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+D+ ELF IG + + + +D++GR S F T+
Sbjct: 103 EEDLDELFRRIGPITKLQLRYDRSGR---SEGVAFVTY 137
>gi|194892678|ref|XP_001977706.1| GG18092 [Drosophila erecta]
gi|190649355|gb|EDV46633.1| GG18092 [Drosophila erecta]
Length = 474
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
G +L VSNLH VT DIRELFS+IG + Y H RP + V ++
Sbjct: 365 GYRLLVSNLHANVTTADIRELFSDIGPM--YDAHV---VRPGTAEV----------IYKS 409
Query: 158 LKWY-MPEEVMHLQLLSDTIMYCWMEN 183
LK M + H + D M+C + N
Sbjct: 410 LKHAEMAVDAYHHREFDDQPMHCVLVN 436
>gi|325187566|emb|CCA22104.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 247
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
R G GTK++V NL + DD+RELF +G++ + I +D++GR
Sbjct: 119 RLGGPETSNTGTKIFVKNLKFDILEDDVRELFGTVGQVTKAEIVYDRSGR 168
>gi|299742555|ref|XP_001832567.2| hypothetical protein CC1G_03581 [Coprinopsis cinerea okayama7#130]
gi|298405237|gb|EAU89316.2| hypothetical protein CC1G_03581 [Coprinopsis cinerea okayama7#130]
Length = 266
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 57 SNARPSSYTIAKSFRRTRNFP-----WQHDLFE---DSLRAAGISGIEV----------- 97
SNAR K + R N P W HD +E + + G++G V
Sbjct: 6 SNAR-------KPYSRPSNRPNTNERWTHDRYEGHQHNRKNQGLNGGNVAAPTAGAGAPG 58
Query: 98 -GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH-FDKNGRPSVSSVACFAT 148
TKL VSNLH VT D+ +F +IG L R + +D++GR + ++ F T
Sbjct: 59 QATKLKVSNLHYEVTPKDLNAIFGQIGTLVREPVLWYDESGRSTGQAIVTFET 111
>gi|302916719|ref|XP_003052170.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
gi|256733109|gb|EEU46457.1| hypothetical protein NECHADRAFT_104111 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 66 IAKSFR-RTRNF--PWQHDLFEDS---------LRAAGISGIEVGTKLYVSNLHPGVTND 113
+ KSFR +RN W HD +E++ R G+KL V N+H +T D
Sbjct: 42 VRKSFRDESRNLDSEWVHDRYEENNSRRGPAPRRRRESPDQESKGSKLRVDNIHYDLTED 101
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
D+ ELF IG + R + +D+ GR S + T+
Sbjct: 102 DLDELFRRIGPVVRLQLRYDRAGR---SEGTAYVTY 134
>gi|190347835|gb|EDK40183.2| hypothetical protein PGUG_04281 [Meyerozyma guilliermondii ATCC
6260]
Length = 264
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 96 EVGTKLYVSNLHPGVTN-DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
E ++ +NL P VTN DD+ ELF IG++ R I FD GRPS ++V F
Sbjct: 179 ERSNTIFATNL-PFVTNVDDLYELFETIGKVTRAEIQFDNRGRPSGNAVVQF 229
>gi|146415164|ref|XP_001483552.1| hypothetical protein PGUG_04281 [Meyerozyma guilliermondii ATCC
6260]
Length = 264
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 96 EVGTKLYVSNLHPGVTN-DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
E ++ +NL P VTN DD+ ELF IG++ R I FD GRPS ++V F
Sbjct: 179 ERSNTIFATNL-PFVTNVDDLYELFETIGKVTRAEIQFDNRGRPSGNAVVQF 229
>gi|259481715|tpe|CBF75495.1| TPA: RNP domain protein (AFU_orthologue; AFUA_6G12300) [Aspergillus
nidulans FGSC A4]
Length = 484
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR + V F
Sbjct: 375 SGGEKSNTIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQF 428
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 223 QLYVSNLPFNVGWQDLKDLFRQAAQQGTVIRADVHTDASGRPKGSGIVAFES 274
>gi|67526563|ref|XP_661343.1| hypothetical protein AN3739.2 [Aspergillus nidulans FGSC A4]
gi|40740757|gb|EAA59947.1| hypothetical protein AN3739.2 [Aspergillus nidulans FGSC A4]
Length = 514
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR + V F
Sbjct: 401 ATSGGEKSNTIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQF 456
>gi|119192920|ref|XP_001247066.1| hypothetical protein CIMG_00837 [Coccidioides immitis RS]
gi|392863699|gb|EAS35532.2| nuclear cap-binding protein subunit 2 [Coccidioides immitis RS]
Length = 187
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 60 RPSSYTIAKSFRRT----RNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
+PS+Y + K+ RR R P + ED L+ A T LYV NL T + I
Sbjct: 24 KPSTYYLGKNKRRKLGQGREEPDEKIEAEDPLKDA--------TTLYVGNLSFYTTEEQI 75
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELF++ GE+KR + D+ + CF +
Sbjct: 76 HELFAKCGEIKRLVMGLDRFAKTPCG--FCFVEY 107
>gi|303312473|ref|XP_003066248.1| Nuclear cap binding protein subunit 2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105910|gb|EER24103.1| Nuclear cap binding protein subunit 2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320033670|gb|EFW15617.1| nuclear cap binding protein subunit 2 [Coccidioides posadasii str.
Silveira]
Length = 187
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 60 RPSSYTIAKSFRRT----RNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
+PS+Y + K+ RR R P + ED L+ A T LYV NL T + I
Sbjct: 24 KPSTYYLGKNKRRKLGQGREEPDEKIEAEDPLKDA--------TTLYVGNLSFYTTEEQI 75
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELF++ GE+KR + D+ + CF +
Sbjct: 76 HELFAKCGEIKRLVMGLDRFAKTPCG--FCFVEY 107
>gi|255935633|ref|XP_002558843.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583463|emb|CAP91476.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 178
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 60 RPSSYTIAKSFRRTRN-----FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
RPS+Y ++K+ RR N P Q + ++ L+ A T LYV NL T +
Sbjct: 14 RPSAYYVSKNKRRRFNDRDEDEPQQEEKPDEKLKNA--------TTLYVGNLSFYTTEEQ 65
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
I ELF++ GE+KR + D+ + CF +
Sbjct: 66 IHELFAKCGEIKRLVMGLDRFNKTPCG--FCFVEY 98
>gi|242022922|ref|XP_002431886.1| hypothetical protein Phum_PHUM556460 [Pediculus humanus corporis]
gi|212517227|gb|EEB19148.1| hypothetical protein Phum_PHUM556460 [Pediculus humanus corporis]
Length = 446
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQH--------DLFEDSLRAAGIS-GIEVGTKLYVSN 105
P++ ++P T+++ F + N Q D+ +++ + + +G ++ VSN
Sbjct: 288 PMARSKPPPRTLSERFCQEGNMTTQKANMLKSKLDINAKNMKNSSPDVQVPIGHRIVVSN 347
Query: 106 LHPGVTNDDIRELFSEIGEL 125
L P VT++D++ELF +IGEL
Sbjct: 348 LVPSVTHEDVKELFEDIGEL 367
>gi|198424161|ref|XP_002119758.1| PREDICTED: similar to DNA polymerase delta interacting protein 3
[Ciona intestinalis]
Length = 428
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
IS E GTK+ VSNLHP V DDI ELFS +G ++R
Sbjct: 293 ISPFE-GTKILVSNLHPIVVEDDILELFSVLGPVRR 327
>gi|320031865|gb|EFW13822.1| RNA binding protein [Coccidioides posadasii str. Silveira]
Length = 361
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 78 WQHDLFEDS--LRAAGISGIEV---------------GTKLYVSNLHPGVTNDDIRELFS 120
W HD FED R A G G KL V+NLH +T +D+R LF+
Sbjct: 98 WVHDKFEDDRDTRPASFRGPRARRDGRLSPPPEQSSSGAKLRVNNLHYDITEEDLRGLFT 157
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
IG + ++ +D+ GR S F T+ L
Sbjct: 158 GIGPILSLSLVYDRAGR---SEGVAFVTYKRL 186
>gi|71001020|ref|XP_755191.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|66852829|gb|EAL93153.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|159129280|gb|EDP54394.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus A1163]
Length = 184
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLF--EDSLRAAG-ISGIEVGTKLYVSNLHPGVTNDDIR 116
RPS+Y +AK R F + + +DS RA I ++ T LYV NL T + I
Sbjct: 14 RPSAYYLAK-VRLEIAFGFDQRKYSQDDSERAEDPIDKLKNATTLYVGNLSFYTTEEQIH 72
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELFS+ GE+KR + D+ + CF +
Sbjct: 73 ELFSKCGEIKRLVMGLDRYNKTPCG--FCFVEY 103
>gi|302409296|ref|XP_003002482.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261358515|gb|EEY20943.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 1025
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 82 LFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+F D RA G ++ G +L+V+NL VT D+++E+FS+IG ++R +I +K G+
Sbjct: 689 MFSDPSRAKKRDGAVDEGRELHVTNLDTVVTEDELKEVFSKIGPVQRVSIPRNKGGK 745
>gi|358369812|dbj|GAA86425.1| small subunit of nuclear cap-binding protein complex [Aspergillus
kawachii IFO 4308]
Length = 176
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y + K+ RR + HD E + ++ T LYV NL T + I ELF
Sbjct: 14 RPSAYYLGKNKRRK----FSHDEAEKP--EDPVDNLKDATTLYVGNLSFYTTEEQIHELF 67
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ GE+KR + D+ + CF +
Sbjct: 68 AKCGEIKRLVMGLDRYNKTPCG--FCFVEY 95
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE S++ A + G LY+ NL G+++D +RELFS G++ + D+NG S
Sbjct: 305 FEQSMKDA--ADKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKGSG 362
Query: 143 VACFAT 148
F+T
Sbjct: 363 FVAFST 368
>gi|395327407|gb|EJF59807.1| hypothetical protein DICSQDRAFT_88921 [Dichomitus squalens LYAD-421
SS1]
Length = 217
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 33/134 (24%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLD+II +R K R + RR G+ + L N+ P+
Sbjct: 1 MDKSLDEIIATRPKGIR---KSNPRRNSGKAQV------------------LGNSNPAPA 39
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE-IG 123
T R R P + + + + K+ VSNL P V ++ELF+ +G
Sbjct: 40 T------RARAVPASN-----GAKTVPPTASQPADKIIVSNLPPDVNEAQVKELFTATVG 88
Query: 124 ELKRYAIHFDKNGR 137
LK +H+D GR
Sbjct: 89 PLKDVTLHYDSQGR 102
>gi|380495456|emb|CCF32382.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 927
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 82 LFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
++ D RA G IE G +L+++NL P DD+++ FS+ G +KR +I +K G+
Sbjct: 554 MYSDPTRAKKREGAIEEGRELHITNLDPSAVEDDVQKAFSKYGTVKRISIPRNKAGK 610
>gi|367043980|ref|XP_003652370.1| hypothetical protein THITE_2113792 [Thielavia terrestris NRRL 8126]
gi|346999632|gb|AEO66034.1| hypothetical protein THITE_2113792 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 66 IAKSFR----RTRNFPWQHDLFED---------SLRAAGISGIEVGTKLYVSNLHPGVTN 112
+ K FR R + W HD FED + S G KL V N+H +T
Sbjct: 39 VRKPFRDDAPRDLDSEWVHDKFEDYGRRSAPRRRRHSPEPSSDSRGAKLRVDNIHYELTQ 98
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+D+ LFS IG L + + +D+ GR S F T+
Sbjct: 99 EDLEGLFSRIGPLIKLEMKYDRAGR---SEGTAFVTY 132
>gi|296812787|ref|XP_002846731.1| nuclear cap binding protein subunit 2 [Arthroderma otae CBS 113480]
gi|238841987|gb|EEQ31649.1| nuclear cap binding protein subunit 2 [Arthroderma otae CBS 113480]
Length = 178
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y K+ RR +++ + D ED ++ ++ T LYV NL T + I ELF
Sbjct: 14 RPSTYFNNKNKRR-KSYHDRGDREEDKIQGDFDVSLKEATTLYVGNLSFYTTEEQIHELF 72
Query: 120 SEIGELKRYAIHFDK 134
++ GE+KR + D+
Sbjct: 73 AKCGEIKRLVMGLDR 87
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 43.1 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE SL+ A + G LY+ NL + +D +RELFS G++ Y + D+NG S
Sbjct: 314 FEQSLKDA--ADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSKGSG 371
Query: 143 VACFAT 148
F+T
Sbjct: 372 FVAFST 377
>gi|193591791|ref|XP_001951805.1| PREDICTED: hypothetical protein LOC100164360 [Acyrthosiphon pisum]
Length = 443
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
+G K+ +SNL P VT +DIRELF++IG+L
Sbjct: 324 IGHKIIISNLEPSVTCEDIRELFADIGDL 352
>gi|170099594|ref|XP_001881015.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643694|gb|EDR07945.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 130
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 35/134 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SLDDII ++ K+ R RG R PS ++ G+ P+ AR ++
Sbjct: 1 MDKSLDDIISAKPKTGR----------RGAARRPSAR---AQVLGSTAVSPVQRARAANI 47
Query: 65 TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF-SEIG 123
+++ + + TK+ VSNL V I+ELF + +G
Sbjct: 48 AASRTAKAV---------------------VPASTKIIVSNLPVDVNETQIKELFTTTVG 86
Query: 124 ELKRYAIHFDKNGR 137
L+ +H+D GR
Sbjct: 87 PLRDVTLHYDAGGR 100
>gi|317138120|ref|XP_001816687.2| RNP domain protein [Aspergillus oryzae RIB40]
Length = 484
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E G +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 375 SGGEKGPVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 428
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 218 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 269
>gi|400593014|gb|EJP61025.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 481
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL +NDD+ ELF+ IG++++ I ++ +GR S V F T
Sbjct: 375 SGTERSEIIYVRNLPWSTSNDDLIELFTTIGKVEQAEIQYEPSGRSRGSGVVKFDT 430
>gi|391870089|gb|EIT79277.1| hypothetical protein Ao3042_04344 [Aspergillus oryzae 3.042]
Length = 432
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E G +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 323 SGGEKGPVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 376
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 166 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 217
>gi|345561390|gb|EGX44479.1| hypothetical protein AOL_s00188g147 [Arthrobotrys oligospora ATCC
24927]
Length = 464
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWV 156
+K+ V NLH + D+R++FS +GE++R I +DK GR + +AT L V
Sbjct: 184 SKIRVENLHYDLGEADLRDVFSRVGEIRRIDIIYDKAGRSEGIANVIYATADEAILAV 241
>gi|260790499|ref|XP_002590279.1| hypothetical protein BRAFLDRAFT_216286 [Branchiostoma floridae]
gi|229275471|gb|EEN46290.1| hypothetical protein BRAFLDRAFT_216286 [Branchiostoma floridae]
Length = 322
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G L V+NL P V+N+ + + F++ GE++R + D GRP+ + FA
Sbjct: 94 GAALKVTNLSPHVSNELLEQAFTQFGEVERAVVIVDDRGRPTGEGIVEFA 143
>gi|150866843|ref|XP_001386572.2| hypothetical protein PICST_25920 [Scheffersomyces stipitis CBS
6054]
gi|149388099|gb|ABN68543.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 424
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 91 GISGI-EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G++G E ++V+NL +NDD+ ELF +G R I +++ G+PS ++V F
Sbjct: 340 GVTGDGEKSDTIFVANLPFATSNDDLYELFETVGRTTRAEIQYNEKGKPSGNAVVQF 396
>gi|452984713|gb|EME84470.1| hypothetical protein MYCFIDRAFT_203037 [Pseudocercospora fijiensis
CIRAD86]
Length = 343
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 78 WQHDLFEDSL-----------RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
W HD FED R G G+KL V N+H +T DD+RELF +G
Sbjct: 67 WVHDRFEDDRYDRRSRAPADDRYGGRDPESTGSKLRVDNIHYELTEDDLRELFERVGPTL 126
Query: 127 RYAIHFDKNGRPSVSSVACF 146
+ +D+ R ++ +
Sbjct: 127 SVRLLYDRQDRSQGTAYVIY 146
>gi|326499215|dbj|BAK06098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ELFSEIGELKRY++++DK+G+ S+ FA
Sbjct: 165 QELFSEIGELKRYSVNYDKDGKSQGSAEVVFA 196
>gi|148237123|ref|NP_001085615.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
laevis]
gi|49115681|gb|AAH73024.1| MGC82630 protein [Xenopus laevis]
Length = 405
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 256 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 290
>gi|440900830|gb|ELR51877.1| Polymerase delta-interacting protein 3, partial [Bos grunniens
mutus]
Length = 430
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 283 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 317
>gi|83764541|dbj|BAE54685.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 308
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E G +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 199 SGGEKGPVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 252
>gi|350583738|ref|XP_003126034.3| PREDICTED: polymerase delta-interacting protein 3-like [Sus scrofa]
Length = 389
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 304 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 338
>gi|258568094|ref|XP_002584791.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906237|gb|EEP80638.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 420
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
G E +YV NL N+D+ ELFS IG+++R I +++NGR + V F T
Sbjct: 313 GGERSALIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEQNGRSRGTGVVQFDTI 368
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++YVSNL V D+++LF ++ G + R +H D NGRP S + F +
Sbjct: 161 QIYVSNLPFNVGWQDLKDLFRQATQQGTVVRADVHLDPNGRPKGSGIVAFES 212
>gi|426225859|ref|XP_004007077.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Ovis
aries]
Length = 421
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|392862747|gb|EAS36587.2| RNP domain-containing protein [Coccidioides immitis RS]
Length = 473
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 366 GGERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDT 420
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACF 146
++YV+NL V D+++LF ++ G + R +H D NGRP S + F
Sbjct: 213 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAF 262
>gi|351708364|gb|EHB11283.1| Polymerase delta-interacting protein 3 [Heterocephalus glaber]
Length = 296
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 149 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 183
>gi|348569624|ref|XP_003470598.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 1
[Cavia porcellus]
Length = 417
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 270 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 304
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE +++ + + + G LY+ NL +T++ ++E+FSE G + Y I D NG S
Sbjct: 300 FEQTVKESVVDKFQ-GLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSG 358
Query: 143 VACFAT 148
F+T
Sbjct: 359 FVAFST 364
>gi|348511422|ref|XP_003443243.1| PREDICTED: polymerase delta-interacting protein 3-like [Oreochromis
niloticus]
Length = 479
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 323 GTKITVNNLHPRVTEEDIVELFCVCGALKR 352
>gi|346326972|gb|EGX96568.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 609
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL +NDD+ ELF+ IG++++ I ++ +GR S V F T
Sbjct: 441 SGTERSEIIYVRNLPWSTSNDDLIELFTTIGKVEQAEIQYEPSGRSRGSGVVKFDT 496
>gi|119472580|ref|XP_001258373.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119406525|gb|EAW16476.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 463
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR + V F
Sbjct: 354 SGGEKSPIIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQF 407
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF + G + R +H D GRP S + F +
Sbjct: 207 QLYVSNLPFNVGWQDLKDLFRQAGAVIRADVHTDATGRPKGSGIVAFES 255
>gi|388501070|gb|AFK38601.1| unknown [Lotus japonicus]
Length = 253
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP D FE +L A+ T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQDEFEQALLAS--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNTKTPCG--FCFVLY 82
>gi|355712626|gb|AES04411.1| polymerase , delta interacting protein 3 [Mustela putorius furo]
Length = 438
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 291 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 325
>gi|426225861|ref|XP_004007078.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Ovis
aries]
Length = 392
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|47217029|emb|CAG01657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 466
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 312 GTKITVNNLHPRVTEEDIVELFCVCGALKR 341
>gi|157073881|ref|NP_001096653.1| polymerase delta-interacting protein 3 [Bos taurus]
gi|157279209|gb|AAI34442.1| Polymerase (DNA-directed), delta interacting protein 3 [Bos taurus]
gi|296486959|tpg|DAA29072.1| TPA: polymerase (DNA-directed), delta interacting protein 3 [Bos
taurus]
Length = 421
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|348569626|ref|XP_003470599.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 2
[Cavia porcellus]
Length = 388
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 241 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 275
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 42.4 bits (98), Expect = 0.081, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
T +YV N+ P VT+D+ RELF + G++ ++ D+ G+P F T F V+
Sbjct: 240 TNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQEGKPRGFGFVNFTTHEAAFKAVE 298
>gi|299116448|emb|CBN76167.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 498
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+ GT+++V L+ V ++DI+ELF+ +G+L I FD+ GR + +++ F
Sbjct: 104 VVAGTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDFDRTGRSNGNALVIF 155
>gi|281344756|gb|EFB20340.1| hypothetical protein PANDA_016426 [Ailuropoda melanoleuca]
Length = 401
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 254 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 288
>gi|119194811|ref|XP_001248009.1| hypothetical protein CIMG_01780 [Coccidioides immitis RS]
Length = 464
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 357 GGERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDT 411
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACF 146
++YV+NL V D+++LF ++ G + R +H D NGRP S + F
Sbjct: 204 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAF 253
>gi|410965747|ref|XP_003989403.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Felis
catus]
Length = 421
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|53749688|ref|NP_001005439.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
gi|49250533|gb|AAH74542.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
Length = 367
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 222 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 251
>gi|345569023|gb|EGX51892.1| hypothetical protein AOL_s00043g626 [Arthrobotrys oligospora ATCC
24927]
Length = 220
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y KS +RTR+ ED L+ A T LYV NL T + I ELF
Sbjct: 69 RPSTY-YDKSGKRTRDDAANK---EDPLKDA--------TTLYVGNLSFYTTEEQIHELF 116
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEEVM 167
S+ GE+KR + D+ FA F +V+ +Y E+ +
Sbjct: 117 SKCGEIKRLVMGLDR-----------FAKTPCGFCFVE--YYTHEDAL 151
>gi|255731382|ref|XP_002550615.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131624|gb|EER31183.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 315
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 91 GISGI-EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G++G+ E ++V NL NDD+ ELF +G + I + +GRPS ++V F
Sbjct: 225 GVTGMGEKSDTIFVENLPFATQNDDLYELFETVGRTTKAEIQYSADGRPSGNAVVQF 281
>gi|410965749|ref|XP_003989404.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Felis
catus]
Length = 392
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|198467383|ref|XP_001354381.2| GA19986 [Drosophila pseudoobscura pseudoobscura]
gi|198149219|gb|EAL31434.2| GA19986 [Drosophila pseudoobscura pseudoobscura]
Length = 481
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
G++ + G +L VSNLH VT DIRELF++IG + Y H + G V
Sbjct: 365 GVANNKKGYRLLVSNLHSNVTTSDIRELFNDIGPM--YDAHVVRPGTAEV 412
>gi|89267426|emb|CAJ83463.1| polymerase (DNA-directed), delta interacting protein 3 [Xenopus
(Silurana) tropicalis]
Length = 433
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 288 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 317
>gi|238495444|ref|XP_002378958.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|220695608|gb|EED51951.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|391872287|gb|EIT81421.1| alpha-actinin, sarcomeric [Aspergillus oryzae 3.042]
Length = 322
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 66 IAKSFRRTR---NFPWQHDLFEDSLR---------------AAGISGIEVGTKLYVSNLH 107
+ KS+R R + W HD +ED + G KL + NLH
Sbjct: 35 VRKSYREERPDLDLDWVHDKYEDDRDSRPSRAPRRPRGDRYSPPPDHAPTGAKLRIENLH 94
Query: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+T D+ +LF+ IG + ++ +D+ GR S F T+
Sbjct: 95 YDITESDLEDLFTRIGPISNLSLVYDRAGR---SEGVAFVTY 133
>gi|345776778|ref|XP_531709.3| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Canis
lupus familiaris]
Length = 421
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|301782633|ref|XP_002926728.1| PREDICTED: polymerase delta-interacting protein 3-like [Ailuropoda
melanoleuca]
Length = 421
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|453084886|gb|EMF12930.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 490
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
SG E ++V NL +N+D+ ELF IG ++R I ++ NGR S V F+ S
Sbjct: 387 SGGEANPIIHVKNLPWSTSNEDLVELFQTIGTVERAEIQYEPNGRSRGSGVVQFSNTS 444
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++++VSNL V D+++LF + G + R +H ++G P S V F T
Sbjct: 218 SQIFVSNLPYQVGWQDLKDLFRQAGNVIRADVHLGQDGNPKGSGVVAFET 267
>gi|224587390|gb|ACN58656.1| Polymerase delta-interacting protein 3 [Salmo salar]
Length = 478
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 326 GTKITVNNLHPRVTEEDIVELFCVCGALKR 355
>gi|195171971|ref|XP_002026775.1| GL27008 [Drosophila persimilis]
gi|194111714|gb|EDW33757.1| GL27008 [Drosophila persimilis]
Length = 504
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
G++ + G +L VSNLH VT DIRELF++IG + Y H + G V
Sbjct: 388 GVANNKKGYRLLVSNLHSNVTTSDIRELFNDIGPM--YDAHVVRPGTAEV 435
>gi|119593672|gb|EAW73266.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_c [Homo sapiens]
Length = 482
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 340 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 369
>gi|60359854|dbj|BAD90146.1| mKIAA1649 protein [Mus musculus]
Length = 453
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 307 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 341
>gi|149743380|ref|XP_001500767.1| PREDICTED: polymerase delta-interacting protein 3 [Equus caballus]
Length = 443
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 296 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 330
>gi|320031479|gb|EFW13442.1| hypothetical protein CPSG_09988 [Coccidioides posadasii str.
Silveira]
Length = 382
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 275 GGERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDT 329
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACF 146
++YV+NL V D+++LF ++ G + R +H D NGRP S + F
Sbjct: 122 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAF 171
>gi|303310955|ref|XP_003065489.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105151|gb|EER23344.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 439
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E +YV NL N+D+ ELFS IG+++R I ++ NGR + V F T
Sbjct: 332 GGERSATIYVRNLPWSTCNEDLVELFSTIGKVERAEIQYEANGRSRGTGVVQFDT 386
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACF 146
++YV+NL V D+++LF ++ G + R +H D NGRP S + F
Sbjct: 179 QIYVNNLPFNVGWQDLKDLFRQATQQGTVARADVHLDPNGRPKGSGIVAF 228
>gi|444723779|gb|ELW64409.1| Polymerase delta-interacting protein 3 [Tupaia chinensis]
Length = 395
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 248 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 282
>gi|432871062|ref|XP_004071852.1| PREDICTED: polymerase delta-interacting protein 3-like [Oryzias
latipes]
Length = 480
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 324 GTKITVNNLHPRVTEEDIVELFCVCGALKR 353
>gi|119593670|gb|EAW73264.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_a [Homo sapiens]
Length = 453
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 311 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 340
>gi|121700040|ref|XP_001268285.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119396427|gb|EAW06859.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 419
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL NDD+ +LFS IG+++R I ++ NGR + V F
Sbjct: 310 SGGEKSPVIYVRNLPWSTCNDDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVQF 363
>gi|417400646|gb|JAA47252.1| Putative rrm motif-containing protein [Desmodus rotundus]
Length = 421
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|345776780|ref|XP_003431530.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Canis
lupus familiaris]
Length = 392
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|74195617|dbj|BAE39617.1| unnamed protein product [Mus musculus]
Length = 429
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 283 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 317
>gi|74209870|dbj|BAE30916.1| unnamed protein product [Mus musculus]
Length = 420
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|406605793|emb|CCH42784.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 436
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
F + + A G E + +YV NL +NDD+ ELF G + I +D GRP+ S+
Sbjct: 346 FTEGVEANG----EKNSTIYVDNLPFATSNDDLFELFETAGRVSAAEIKYDPTGRPAGSA 401
Query: 143 VACFAT 148
V F +
Sbjct: 402 VVKFES 407
>gi|431900012|gb|ELK07947.1| Polymerase delta-interacting protein 3 [Pteropus alecto]
Length = 440
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 293 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 327
>gi|34327982|dbj|BAB33368.2| KIAA1649 protein [Homo sapiens]
Length = 424
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 282 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 311
>gi|407915850|gb|EKG09360.1| hypothetical protein MPH_13626 [Macrophomina phaseolina MS6]
Length = 218
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F T
Sbjct: 111 SGGERSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFDT 166
>gi|395819634|ref|XP_003783187.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Otolemur garnettii]
Length = 421
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|194382604|dbj|BAG64472.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 296 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 325
>gi|390458881|ref|XP_002743862.2| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Callithrix jacchus]
Length = 421
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|332231398|ref|XP_003264883.1| PREDICTED: uncharacterized protein LOC100580935 isoform 3 [Nomascus
leucogenys]
Length = 438
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 296 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 325
>gi|126339059|ref|XP_001370917.1| PREDICTED: polymerase delta-interacting protein 3-like [Monodelphis
domestica]
Length = 411
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 270 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 299
>gi|403371927|gb|EJY85849.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 211
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
SN + Y +S +++++ PW ++ + +G++ GTKL + NLH +T D ++
Sbjct: 96 SNRNQNQYQDNQS-QKSKSTPWDTKKEQNEQQISGLAS--GGTKLLIKNLHFEITEDKLQ 152
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
E+ + G++ + +DK+ R + ++A F
Sbjct: 153 EILTPYGQVHSCKLVWDKHDRSTGEAIAIF 182
>gi|402884440|ref|XP_003905690.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2 [Papio
anubis]
Length = 392
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|344254561|gb|EGW10665.1| Polymerase delta-interacting protein 3 [Cricetulus griseus]
Length = 373
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 226 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 260
>gi|332859961|ref|XP_003317329.1| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467012|ref|XP_003805228.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
Length = 438
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 296 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 325
>gi|148672533|gb|EDL04480.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_a [Mus musculus]
Length = 420
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|194473638|ref|NP_001123978.1| polymerase delta-interacting protein 3 [Rattus norvegicus]
gi|149065765|gb|EDM15638.1| polymerase (DNA-directed), delta interacting protein 3 (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 420
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|33876281|gb|AAH01488.2| POLDIP3 protein, partial [Homo sapiens]
Length = 417
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 275 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 304
>gi|426394703|ref|XP_004063627.1| PREDICTED: polymerase delta-interacting protein 3 [Gorilla gorilla
gorilla]
Length = 263
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 195 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 229
>gi|390458883|ref|XP_003732195.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Callithrix jacchus]
Length = 392
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|344296314|ref|XP_003419854.1| PREDICTED: polymerase delta-interacting protein 3 [Loxodonta
africana]
Length = 420
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 273 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 307
>gi|402884438|ref|XP_003905689.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1 [Papio
anubis]
Length = 421
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|395753496|ref|XP_002831266.2| PREDICTED: polymerase delta-interacting protein 3 [Pongo abelii]
Length = 438
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 296 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 325
>gi|255082091|ref|XP_002508264.1| RNA binding protein [Micromonas sp. RCC299]
gi|226523540|gb|ACO69522.1| RNA binding protein [Micromonas sp. RCC299]
Length = 493
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
K+Y HP T+ +R++ +GELK +A+ D+NGRP+
Sbjct: 267 KMYCGGFHPLHTDLQVRQVLQSVGELKSFAVMPDENGRPT 306
>gi|29837655|ref|NP_115687.2| polymerase delta-interacting protein 3 isoform 1 [Homo sapiens]
gi|50403796|sp|Q9BY77.2|PDIP3_HUMAN RecName: Full=Polymerase delta-interacting protein 3; AltName:
Full=46 kDa DNA polymerase delta interaction protein;
Short=p46; AltName: Full=S6K1 Aly/REF-like target;
Short=SKAR
gi|7228284|emb|CAB77058.1| hypothetical protein [Homo sapiens]
gi|37595436|gb|AAQ94604.1| RNA-binding protein P46 [Homo sapiens]
gi|47678443|emb|CAG30342.1| dJ222E13.3 [Homo sapiens]
gi|55777399|gb|AAH49840.1| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|63102441|gb|AAH95411.1| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|109451152|emb|CAK54437.1| POLDIP3 [synthetic construct]
gi|109451730|emb|CAK54736.1| POLDIP3 [synthetic construct]
gi|158256980|dbj|BAF84463.1| unnamed protein product [Homo sapiens]
gi|168278937|dbj|BAG11348.1| polymerase delta-interacting protein 3 [synthetic construct]
Length = 421
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|30089919|ref|NP_835237.1| polymerase delta-interacting protein 3 isoform 2 [Homo sapiens]
gi|7228286|emb|CAB77059.1| hypothetical protein [Homo sapiens]
gi|56079007|gb|AAH56912.2| Polymerase (DNA-directed), delta interacting protein 3 [Homo
sapiens]
gi|158256678|dbj|BAF84312.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|355563731|gb|EHH20293.1| hypothetical protein EGK_03115 [Macaca mulatta]
Length = 391
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 249 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 278
>gi|30519969|ref|NP_848742.1| polymerase delta-interacting protein 3 [Mus musculus]
gi|50401030|sp|Q8BG81.1|PDIP3_MOUSE RecName: Full=Polymerase delta-interacting protein 3; AltName:
Full=S6K1 Aly/REF-like target; Short=SKAR
gi|26349009|dbj|BAC38144.1| unnamed protein product [Mus musculus]
gi|26350863|dbj|BAC39068.1| unnamed protein product [Mus musculus]
gi|26352494|dbj|BAC39877.1| unnamed protein product [Mus musculus]
gi|55249578|gb|AAH46505.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
gi|56079151|gb|AAH58225.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
gi|77045764|gb|AAH37652.2| Polymerase (DNA-directed), delta interacting protein 3 [Mus
musculus]
Length = 420
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 274 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|403282846|ref|XP_003932849.1| PREDICTED: polymerase delta-interacting protein 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 421
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|395819636|ref|XP_003783188.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Otolemur garnettii]
Length = 392
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|378732142|gb|EHY58601.1| hypothetical protein HMPREF1120_06609 [Exophiala dermatitidis
NIH/UT8656]
Length = 451
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F +
Sbjct: 344 SGGEKNPIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEFGS 399
>gi|300116246|ref|NP_001177830.1| polymerase delta-interacting protein 3 [Macaca mulatta]
gi|380786117|gb|AFE64934.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
gi|383410749|gb|AFH28588.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
gi|384942508|gb|AFI34859.1| polymerase delta-interacting protein 3 isoform 1 [Macaca mulatta]
Length = 421
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|332859957|ref|XP_515172.3| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467008|ref|XP_003805226.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
gi|410216672|gb|JAA05555.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410267538|gb|JAA21735.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410354107|gb|JAA43657.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
Length = 421
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|332231396|ref|XP_003264882.1| PREDICTED: uncharacterized protein LOC100580935 isoform 2 [Nomascus
leucogenys]
Length = 392
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|149065766|gb|EDM15639.1| polymerase (DNA-directed), delta interacting protein 3 (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 391
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|383410751|gb|AFH28589.1| polymerase delta-interacting protein 3 isoform 2 [Macaca mulatta]
Length = 392
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|332859959|ref|XP_003317328.1| PREDICTED: uncharacterized protein LOC458882 [Pan troglodytes]
gi|397467010|ref|XP_003805227.1| PREDICTED: polymerase delta-interacting protein 3 [Pan paniscus]
gi|410216670|gb|JAA05554.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410267536|gb|JAA21734.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
gi|410354105|gb|JAA43656.1| polymerase (DNA-directed), delta interacting protein 3 [Pan
troglodytes]
Length = 392
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|332231394|ref|XP_003264881.1| PREDICTED: uncharacterized protein LOC100580935 isoform 1 [Nomascus
leucogenys]
Length = 421
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 308
>gi|148672534|gb|EDL04481.1| polymerase (DNA-directed), delta interacting protein 3, isoform
CRA_b [Mus musculus]
Length = 391
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|74213780|dbj|BAE29328.1| unnamed protein product [Mus musculus]
Length = 391
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 245 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|403282848|ref|XP_003932850.1| PREDICTED: polymerase delta-interacting protein 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 392
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 250 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 279
>gi|114432134|gb|ABI74675.1| POLDIP3 [Homo sapiens]
Length = 163
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+S +E GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 16 LSPLE-GTKMTVNNLHPRVTEEDIVELFCVCGALKR 50
>gi|395541317|ref|XP_003772591.1| PREDICTED: polymerase delta-interacting protein 3 [Sarcophilus
harrisii]
Length = 418
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 277 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 306
>gi|327287220|ref|XP_003228327.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 2
[Anolis carolinensis]
Length = 392
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 252 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 281
>gi|327287218|ref|XP_003228326.1| PREDICTED: polymerase delta-interacting protein 3-like isoform 1
[Anolis carolinensis]
Length = 418
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 278 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 307
>gi|449481723|ref|XP_002196467.2| PREDICTED: polymerase delta-interacting protein 3 [Taeniopygia
guttata]
Length = 416
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 275 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 304
>gi|449276143|gb|EMC84806.1| Polymerase delta-interacting protein 3 [Columba livia]
Length = 404
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 263 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 292
>gi|354493449|ref|XP_003508854.1| PREDICTED: polymerase delta-interacting protein 3 [Cricetulus
griseus]
Length = 438
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 296 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 325
>gi|350296162|gb|EGZ77139.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 332
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 66 IAKSFR----RTRNFPWQHDLFEDSLRAAGISGIEV--------GTKLYVSNLHPGVTND 113
+ KSFR R + W HD FE++ R G+K+ V N+H +T +
Sbjct: 52 VRKSFRDDAPRNLDSEWVHDKFEENDRRRAPRRRNSPEPFSDARGSKIRVDNIHYELTQE 111
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF-SPLFLWVQLKWY 161
D+ LFS IG L + + +D+ GR S F T+ SP ++ Y
Sbjct: 112 DLEGLFSRIGPLVKLDMKYDRAGR---SEGTAFVTYESPQDASRAIREY 157
>gi|345311215|ref|XP_001508801.2| PREDICTED: polymerase delta-interacting protein 3-like, partial
[Ornithorhynchus anatinus]
Length = 394
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 253 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 282
>gi|61097949|ref|NP_001012832.1| polymerase delta-interacting protein 3 [Gallus gallus]
gi|60098375|emb|CAH65018.1| hypothetical protein RCJMB04_1d4 [Gallus gallus]
Length = 418
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 277 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 306
>gi|85090449|ref|XP_958422.1| hypothetical protein NCU07421 [Neurospora crassa OR74A]
gi|28919783|gb|EAA29186.1| hypothetical protein NCU07421 [Neurospora crassa OR74A]
Length = 332
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 66 IAKSFR----RTRNFPWQHDLFEDSLRAAGISGIEV--------GTKLYVSNLHPGVTND 113
+ KSFR R + W HD FE++ R G+K+ V N+H +T +
Sbjct: 52 VRKSFRDDAPRNLDSEWVHDKFEENDRRRAPRRRNSPEPFSDARGSKIRVDNIHYELTQE 111
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF-SPLFLWVQLKWY 161
D+ LFS IG L + + +D+ GR S F T+ SP ++ Y
Sbjct: 112 DLEGLFSRIGPLVKLDMKYDRAGR---SEGTAFVTYESPQDASRAIREY 157
>gi|147902093|ref|NP_001089369.1| uncharacterized protein LOC734419 [Xenopus laevis]
gi|62471556|gb|AAH93543.1| MGC114944 protein [Xenopus laevis]
Length = 395
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 21/30 (70%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V NLHP VT +DI ELF G LKR
Sbjct: 287 GTKMTVKNLHPRVTEEDIVELFCVCGALKR 316
>gi|326912076|ref|XP_003202380.1| PREDICTED: polymerase delta-interacting protein 3-like [Meleagris
gallopavo]
Length = 429
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 288 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 317
>gi|449511408|ref|XP_002197072.2| PREDICTED: polymerase delta-interacting protein 3-like, partial
[Taeniopygia guttata]
Length = 149
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 8 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 37
>gi|50545625|ref|XP_500351.1| YALI0B00616p [Yarrowia lipolytica]
gi|49646217|emb|CAG82565.1| YALI0B00616p [Yarrowia lipolytica CLIB122]
Length = 589
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
GT LY++NL+P + N+ +R FS+ GE+ I D G CF
Sbjct: 292 GTNLYITNLNPAINNERLRAYFSKFGEITSVRIMLDAVGNSKGFGFVCF 340
>gi|242776508|ref|XP_002478850.1| small subunit of nuclear cap-binding protein complex [Talaromyces
stipitatus ATCC 10500]
gi|218722469|gb|EED21887.1| small subunit of nuclear cap-binding protein complex [Talaromyces
stipitatus ATCC 10500]
Length = 174
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 60 RPSSYTIAKSFRRTRNF--PWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RPS+Y +K+ RR N +H+ D+LR A T LYV NL T + I E
Sbjct: 13 RPSAYYQSKNKRRRYNDRDDEKHEDPTDNLRNA--------TTLYVGNLSFYTTEEQIHE 64
Query: 118 LFSEIGELKRYAIHFDK 134
LF++ GE+KR + D+
Sbjct: 65 LFAKCGEIKRLVMGLDR 81
>gi|328874187|gb|EGG22553.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 348
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G ++ VSNL+ VT +D+ ++F +GE+K I+FD++GR ++ ++
Sbjct: 271 TGARVNVSNLNYDVTQEDLIQIFQRVGEVKSLNINFDRSGRSDGTATIVYS 321
>gi|145246436|ref|XP_001395467.1| nuclear cap-binding protein subunit 2 [Aspergillus niger CBS
513.88]
gi|134080183|emb|CAK46163.1| unnamed protein product [Aspergillus niger]
gi|350636821|gb|EHA25179.1| hypothetical protein ASPNIDRAFT_211639 [Aspergillus niger ATCC
1015]
Length = 176
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFE------DSLRAAGISGIEVGTKLYVSNLHPGVTND 113
RPS+Y + K+ RR + HD E D+L+ A T LYV NL T +
Sbjct: 14 RPSAYYLGKNKRRK----FSHDEGEKPEDPTDNLKDA--------TTLYVGNLSFYTTEE 61
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
I ELF++ GE+KR + D+ + CF +
Sbjct: 62 QIHELFAKCGEIKRLVMGLDRYNKTPCG--FCFVEY 95
>gi|189191918|ref|XP_001932298.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973904|gb|EDU41403.1| RNP domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 468
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F
Sbjct: 361 AGGEPSNTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEF 414
>gi|194387136|dbj|BAG59934.1| unnamed protein product [Homo sapiens]
Length = 186
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP VT +DI ELF G LKR
Sbjct: 123 GTKMTVNNLHPRVTEEDIVELFCVCGALKR 152
>gi|330913095|ref|XP_003296184.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
gi|311331880|gb|EFQ95720.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
Length = 481
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F
Sbjct: 374 AGGEPSNTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEF 427
>gi|358385647|gb|EHK23243.1| hypothetical protein TRIVIDRAFT_127044, partial [Trichoderma virens
Gv29-8]
Length = 453
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E G +YV NL +NDD+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 347 AGTERGEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 400
>gi|342877151|gb|EGU78658.1| hypothetical protein FOXB_10844 [Fusarium oxysporum Fo5176]
Length = 490
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E G +YV NL +NDD+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 384 AGTERGEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 437
>gi|224092924|ref|XP_002309756.1| predicted protein [Populus trichocarpa]
gi|118488601|gb|ABK96113.1| unknown [Populus trichocarpa]
gi|222852659|gb|EEE90206.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L+ A T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGNQEEFEHALQTA--------TTVYIGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFVLY 82
>gi|310799153|gb|EFQ34046.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 1112
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 82 LFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
++ D RA G IE G +L+V+NL P DD+ + FS+ G +KR +I +K G+
Sbjct: 745 MYSDPTRAKKREGAIEEGRELHVTNLDPLAVEDDVEKAFSKYGTVKRISILRNKAGK 801
>gi|169599889|ref|XP_001793367.1| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
gi|160705342|gb|EAT89501.2| hypothetical protein SNOG_02770 [Phaeosphaeria nodorum SN15]
Length = 328
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 89 AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
AAG G E + +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F
Sbjct: 219 AAG--GGEPSSTIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEF 274
>gi|452984797|gb|EME84554.1| hypothetical protein MYCFIDRAFT_214779 [Pseudocercospora fijiensis
CIRAD86]
Length = 178
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PSSY ++K +R R +HD + + + T LYV NL T + I LF
Sbjct: 15 KPSSYAMSKYKKRKRAPHEEHDESKRAPSPDLEEKLANATTLYVGNLSFYTTEEQIHSLF 74
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
S GE+KR + D+ + CF +
Sbjct: 75 STCGEIKRLVMGLDRFAKTPCG--FCFVEY 102
>gi|392562040|gb|EIW55221.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 243
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 78 WQHDLFEDSLRAAGISGIE------VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA-I 130
W HD RA + T++ VSNLH VT D+ ++F +IG L R I
Sbjct: 28 WLHDKAPGVPRAVQANATSRPAGGITNTRILVSNLHYEVTPKDLTQIFGQIGTLVREPLI 87
Query: 131 HFDKNGRPSVSSVACFAT 148
+D++GR + +V F T
Sbjct: 88 RYDRSGRSTGVAVVTFET 105
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSVSSVACFATFSPLFLWVQ 157
+ +YV NL P VT DDIRE F+E G + I DK G+ + FA S + +
Sbjct: 316 STVYVGNLDPSVTEDDIREFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSGVLQALT 375
Query: 158 L 158
L
Sbjct: 376 L 376
>gi|336464082|gb|EGO52322.1| hypothetical protein NEUTE1DRAFT_90482 [Neurospora tetrasperma FGSC
2508]
Length = 332
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 66 IAKSFR----RTRNFPWQHDLFE--DSLRAAGISGIEV------GTKLYVSNLHPGVTND 113
+ KSFR R + W HD FE D RA G+K+ V N+H +T +
Sbjct: 52 VRKSFRDDAPRNLDSEWVHDKFEENDHRRAPRRRNSPEPFSDARGSKIRVDNIHYELTQE 111
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF-SPLFLWVQLKWY 161
D+ LFS IG L + + +D+ GR S F T+ SP ++ Y
Sbjct: 112 DLEGLFSRIGPLVKLDMKYDRAGR---SEGTAFVTYESPQDASRAIREY 157
>gi|170100094|ref|XP_001881265.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643944|gb|EDR08195.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 78 WQHDLFEDSLRAA------GISGIEVGT---KLYVSNLHPGVTNDDIRELFSEIGELKRY 128
W HD RA G+S T KL VSNLH +T D+ +F +IG L R
Sbjct: 26 WLHDKAPTGPRATRQNIGLGVSPATTTTPNSKLVVSNLHYEITPKDLTAIFGQIGTLVRE 85
Query: 129 A-IHFDKNGRPSVSSVACFAT 148
I +D++GR S ++ F T
Sbjct: 86 PLIRYDRSGRSSGTAFIAFET 106
>gi|430812485|emb|CCJ30102.1| unnamed protein product [Pneumocystis jirovecii]
Length = 376
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELK--------RYAIHFDKNGRPSVSSVACFATF 149
T +Y+SNL P VT D+IRE FS+ G + R I+ ++ G P ++ F
Sbjct: 118 NTAVYISNLPPDVTEDEIRERFSKCGVISENIDTGKPRIKIYMNERGEPKGDAMVVFFRE 177
Query: 150 SPLFLWVQL 158
+ L +QL
Sbjct: 178 ESVKLAIQL 186
>gi|260940561|ref|XP_002614580.1| hypothetical protein CLUG_05358 [Clavispora lusitaniae ATCC 42720]
gi|238851766|gb|EEQ41230.1| hypothetical protein CLUG_05358 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
EVG +Y +NL + D+ ELF IG + R I ++ GRPS ++V F +
Sbjct: 234 EVGPAIYAANLPYITSQTDLFELFETIGRVVRAEIQYNAKGRPSGNAVVEFES 286
>gi|241957041|ref|XP_002421240.1| poly(A+) RNA-binding protein, putative; single-strand telomeric
DNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644584|emb|CAX40572.1| poly(A+) RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 460
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
F D + A G E +YV+NL +DD+ ELF +G + I + +GRPS ++
Sbjct: 366 FTDGVTADG----EKSDTIYVANLPFATQDDDLYELFETVGRTTKAEIQYADDGRPSGNA 421
Query: 143 VACF 146
V F
Sbjct: 422 VVQF 425
>gi|116179604|ref|XP_001219651.1| hypothetical protein CHGG_00430 [Chaetomium globosum CBS 148.51]
gi|88184727|gb|EAQ92195.1| hypothetical protein CHGG_00430 [Chaetomium globosum CBS 148.51]
Length = 530
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G+E +YV NL +NDD+ ELFS IG++++ I ++ +GR S V F
Sbjct: 425 GVEKCDIIYVRNLPWSTSNDDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRF 477
>gi|453085264|gb|EMF13307.1| nuclear cap binding protein subunit 2 [Mycosphaerella populorum
SO2202]
Length = 177
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGIS---GIEVGTKLYVSNLHPGVTNDDIR 116
+PSSY ++K +R RN P + S RAA ++ T LYV NL T + I
Sbjct: 10 KPSSYAMSKYKKRKRN-PADEPT-DGSARAASPDLEEKLQNATTLYVGNLSFYTTEEQIH 67
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
LFS GE+KR + D+ + CF +
Sbjct: 68 SLFSTCGEIKRLVMGLDRFAKTPCG--FCFVEY 98
>gi|326469569|gb|EGD93578.1| nuclear cap binding protein subunit 2 [Trichophyton tonsurans CBS
112818]
Length = 168
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y K+ RR +++ + + ED +A + ++ T LYV NL T + I ELF
Sbjct: 13 KPSTYFSNKNKRR-KSYHDRGEREEDKPQADFDASLKEATTLYVGNLSFYTTEEQIHELF 71
Query: 120 SEIGELKRYAIHFDK 134
++ GE+KR + D+
Sbjct: 72 AKCGEIKRLVMGLDR 86
>gi|189188792|ref|XP_001930735.1| nuclear cap-binding protein subunit 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330939415|ref|XP_003305844.1| hypothetical protein PTT_18794 [Pyrenophora teres f. teres 0-1]
gi|187972341|gb|EDU39840.1| nuclear cap-binding protein subunit 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311316986|gb|EFQ86077.1| hypothetical protein PTT_18794 [Pyrenophora teres f. teres 0-1]
Length = 168
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 60 RPSSYTIAKSFRRTRNFP----WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
+PSSY AK +R +N + ED LR A T LYV NL T + I
Sbjct: 13 KPSSYATAKKRKRHQNTRDDDRGRSPSPEDKLRDA--------TTLYVGNLSFYTTEEQI 64
Query: 116 RELFSEIGELKRYAIHFDK 134
ELFS+ GE+KR + D+
Sbjct: 65 HELFSKCGEIKRLVMGLDR 83
>gi|400602903|gb|EJP70501.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 301
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
GTK+ V NLH +T +DI ELF IG + R + FD+ GR S + T+
Sbjct: 82 GTKIKVDNLHWDLTEEDIGELFRRIGRVVRLQLKFDRAGR---SEGIAYVTYE 131
>gi|392589278|gb|EIW78609.1| hypothetical protein CONPUDRAFT_108567 [Coniophora puteana
RWD-64-598 SS2]
Length = 239
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 78 WQHDLFE-DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK-RYAIHFDKN 135
W HD S AA +G E KL VSNLH +T ++ +F +IG L I +D++
Sbjct: 20 WSHDRAALSSGPAARTAGSEPSMKLIVSNLHYEITPKNLMSIFGQIGTLVCEPQIRYDRS 79
Query: 136 GRPSVSSVACFATF 149
GR S ++ + T
Sbjct: 80 GRSSGVAIVTYETI 93
>gi|194861136|ref|XP_001969722.1| GG10249 [Drosophila erecta]
gi|190661589|gb|EDV58781.1| GG10249 [Drosophila erecta]
Length = 222
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 28/136 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M + MSL+DIIK K R + QG R G R P+ S G + G R P +
Sbjct: 1 MLDKMQMSLEDIIKL-NKVHRAQKQGVQR---GSTRKPN---SKGGLKGILR--PRNG-- 49
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
+ Y F R E++LR + T L V NL+ + +DDI ELF+
Sbjct: 50 -TGYIHKAKFNR-----------ENALRPP-----KKHTFLMVCNLNYALNDDDIMELFN 92
Query: 121 EIGELKRYAIHFDKNG 136
E G +++ +H+D++G
Sbjct: 93 ENGLVEKGFVHYDRDG 108
>gi|327303374|ref|XP_003236379.1| nuclear cap binding protein subunit 2 [Trichophyton rubrum CBS
118892]
gi|326461721|gb|EGD87174.1| nuclear cap binding protein subunit 2 [Trichophyton rubrum CBS
118892]
gi|326478905|gb|EGE02915.1| nuclear cap-binding protein subunit 2 [Trichophyton equinum CBS
127.97]
Length = 168
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y K+ RR +++ + + ED +A + ++ T LYV NL T + I ELF
Sbjct: 13 KPSTYFSNKNKRR-KSYHDRGEREEDKPQADFDASLKEATTLYVGNLSFYTTEEQIHELF 71
Query: 120 SEIGELKRYAIHFDK 134
++ GE+KR + D+
Sbjct: 72 AKCGEIKRLVMGLDR 86
>gi|325089108|gb|EGC42418.1| RNP domain-containing protein [Ajellomyces capsulatus H88]
Length = 471
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR + V F T
Sbjct: 364 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGRSRGTGVVEFDT 419
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G ++YVSNL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 208 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHADPSGRPKGSGIVAFES 261
>gi|291236254|ref|XP_002738055.1| PREDICTED: splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated)-like [Saccoglossus
kowalevskii]
Length = 544
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G L + NLHP V+N+ + + FS+ G ++R + D GRP+ + F+
Sbjct: 146 GAALRIRNLHPVVSNELLEQAFSQFGVIERAVVIVDDRGRPTGDGIVEFS 195
>gi|402080147|gb|EJT75292.1| RNP domain-containing protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 509
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL +NDD+ ELF+ IG +++ I ++ +GR S V F
Sbjct: 401 SGTERSETIYVRNLPWSTSNDDLVELFTTIGRVEQAEIQYEPSGRSRGSGVVRF 454
>gi|403412901|emb|CCL99601.1| predicted protein [Fibroporia radiculosa]
Length = 496
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 78 WQHDLFEDSLRAAGISG--IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDK 134
W HD + ++G KL VSNLH +T D+ ++F ++G L R I +D+
Sbjct: 295 WLHDRAPIAPEVQNVNGSSTNATPKLIVSNLHYELTTKDLTQIFGQVGTLVREPLIRYDR 354
Query: 135 NGRPSVSSVACFAT 148
+GR S ++ F T
Sbjct: 355 SGRSSGVAIISFET 368
>gi|225560818|gb|EEH09099.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 471
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR + V F T
Sbjct: 364 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGRSRGTGVVEFDT 419
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G ++YVSNL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 208 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHVDPSGRPKGSGIVAFES 261
>gi|213511084|ref|NP_001134004.1| paraspeckle component 1 [Salmo salar]
gi|209156124|gb|ACI34294.1| Paraspeckle component 1 [Salmo salar]
Length = 545
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G+ L V NL P V+N+ + E FSE G ++R + D GRP+ FA
Sbjct: 170 GSALTVRNLSPVVSNELLEEAFSEFGPVERAIVVVDDRGRPTGKGFVEFAN 220
>gi|154274135|ref|XP_001537919.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus NAm1]
gi|150415527|gb|EDN10880.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus NAm1]
gi|240282339|gb|EER45842.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus H143]
gi|325088474|gb|EGC41784.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus H88]
Length = 171
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 60 RPSSYTIAKSFRRT---RNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+PS+Y ++K+ RR R+ P + + D L+ A T LYV NL T + I
Sbjct: 11 KPSAYYLSKNKRRKHGDRDGPQEDPI--DPLKDA--------TTLYVGNLSFYTTEEQIH 60
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELF++ GE+KR + D+ + CF +
Sbjct: 61 ELFAKCGEIKRLVMGLDRFAKTPCG--FCFVEY 91
>gi|328768986|gb|EGF79031.1| hypothetical protein BATDEDRAFT_90004 [Batrachochytrium
dendrobatidis JAM81]
Length = 168
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
KL VSNL VT D+RELFS IG L+ ++++ G+ S+ F
Sbjct: 14 KLVVSNLAFNVTEADVRELFSRIGPLRSAQLNYNSEGKSKGSATVIF 60
>gi|119479649|ref|XP_001259853.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119408007|gb|EAW17956.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 353
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 77/190 (40%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARR-GRGRGRGPSGSVSGGRMTGAARRGPLSNARPSS 63
+D SLD+II +ER + Q R RR +G+GR G
Sbjct: 1 MDRSLDEII-----AERPQKQNRGRRPPQGQGRRRDG----------------------- 32
Query: 64 YTIAKSFRRTR---NFPWQHDLFEDSL----------------------RAAGISGIEV- 97
+ KS+R R + W HD ++D R G+SG+++
Sbjct: 33 --VKKSYREERVDLDLDWVHDRYDDDRDSFFQHALLVVPDVHAVTVTPHRPIGMSGLDLL 90
Query: 98 -----------------GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
G K+ V NLH +T D+ +LF+ IG + ++ +D+ GR
Sbjct: 91 LKHFVGVAANSCSSAPAGAKIRVENLHYDITESDLEDLFTRIGPVSNLSLVYDRAGR--- 147
Query: 141 SSVACFATFS 150
S + T++
Sbjct: 148 SEGVAYVTYN 157
>gi|239608856|gb|EEQ85843.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 534
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL N+D+ +LFS IG+++R I ++ NGR + V F
Sbjct: 427 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEF 480
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G ++YVSNL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 271 GRQIYVSNLPFNVGWQDLKDLFRQAAQQGAVVRADVHIDPSGRPKGSGIVAFES 324
>gi|296422908|ref|XP_002841000.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637228|emb|CAZ85191.1| unnamed protein product [Tuber melanosporum]
Length = 332
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
GT L+V+ +HP +T DD+ LF++ GE+++ I D + + S F + L
Sbjct: 93 GTNLFVTGIHPRLTEDDVTRLFAKYGEVEKCQIMLDPHTK--ESRGFGFVKLATLDQADS 150
Query: 158 LKWYMPEEVMHLQLLS 173
K ++ EV + LS
Sbjct: 151 AKEHLQGEVFEGRTLS 166
>gi|261203825|ref|XP_002629126.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239586911|gb|EEQ69554.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|327356167|gb|EGE85024.1| hypothetical protein BDDG_07969 [Ajellomyces dermatitidis ATCC
18188]
Length = 471
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL N+D+ +LFS IG+++R I ++ NGR + V F
Sbjct: 364 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEF 417
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G ++YVSNL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 207 GRQIYVSNLPFNVGWQDLKDLFRQAAQQGAVVRADVHIDPSGRPKGSGIVAFES 260
>gi|340959251|gb|EGS20432.1| hypothetical protein CTHT_0022620 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 190
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 53 RGPLSNA----RPSSYTIAKSFRRTRNFPWQHDLFED---SLRAAGISGIEVGTKLYVSN 105
RGP + +PS+Y + +S +R R +H ED S + ++ T LYV N
Sbjct: 2 RGPRTTVERLDQPSAYFLNRSNKR-RRIDKEHREGEDNSSSPEEDPVVKLQNATTLYVGN 60
Query: 106 LHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
L T + + ELFS+ GE+KR + D+ + CF +
Sbjct: 61 LSFYTTEEQVYELFSKCGEIKRLVMGLDRYTKTPCG--FCFVEY 102
>gi|322701005|gb|EFY92756.1| RNA binding protein, putative [Metarhizium acridum CQMa 102]
Length = 365
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 71 RRTRNFPWQHDLFEDSLRAAGISGIEV---------GTKLYVSNLHPGVTNDDIRELFSE 121
RR + W HD +++S G + G+K+ V N+H +T +D+ ELF+
Sbjct: 106 RRNIDSEWVHDRYDESESRRGPASRRRRDSPVSDNKGSKIRVENIHYDLTEEDLDELFAR 165
Query: 122 IGELKRYAIHFDKNGR 137
IG + R + +D+ GR
Sbjct: 166 IGRVSRLNLRYDRAGR 181
>gi|115389920|ref|XP_001212465.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194861|gb|EAU36561.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 468
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 85 DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVA 144
+S SG E +YV NL N+D+ +LFS IG+++R I ++ NGR + V
Sbjct: 344 NSFTDFATSGGEKSPIIYVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVV 403
Query: 145 CF 146
F
Sbjct: 404 QF 405
>gi|410901627|ref|XP_003964297.1| PREDICTED: polymerase delta-interacting protein 3-like [Takifugu
rubripes]
Length = 473
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GTK+ V+NLHP V+ +DI ELF G LKR
Sbjct: 319 GTKITVNNLHPRVSEEDIVELFCVCGALKR 348
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE SL+ A + + G LYV NL + +D +RELFSE G + + D NG S
Sbjct: 300 FEQSLKEA-VDKFQ-GLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSG 357
Query: 143 VACFAT 148
F+T
Sbjct: 358 FVAFST 363
>gi|453082453|gb|EMF10500.1| hypothetical protein SEPMUDRAFT_127214 [Mycosphaerella populorum
SO2202]
Length = 345
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 78 WQHDLFE-------------DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGE 124
W HD FE D R A +GTKL + N+H +T +D+RELF +G
Sbjct: 71 WVHDRFEEDRYDRRGPRVPVDDDRYAPRGAPPIGTKLRIDNVHYELTEEDLRELFERVGP 130
Query: 125 LKRYAIHFDKNGRPSVSSVACF 146
+ +D++ R + ++ +
Sbjct: 131 TISVRLLYDRSDRSTGTAFVVY 152
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
K+++ NLHP +T +D+ +L GE++ A+ ++ G VS FATFS
Sbjct: 192 NKVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKNEEG---VSKGFAFATFS 240
>gi|347964752|ref|XP_001237182.3| AGAP000924-PA [Anopheles gambiae str. PEST]
gi|333466463|gb|EAU77553.3| AGAP000924-PA [Anopheles gambiae str. PEST]
Length = 498
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNLHP VT DI+ELF +IG+L
Sbjct: 407 GYRIVVSNLHPSVTQLDIKELFEDIGDL 434
>gi|240280637|gb|EER44141.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 406
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR + V F T
Sbjct: 303 SGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGRSRGTGVVEFDT 358
>gi|145485817|ref|XP_001428916.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396005|emb|CAK61518.1| unnamed protein product [Paramecium tetraurelia]
Length = 140
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GT + ++NLH VTN++++EL + G++KR + +DK GR
Sbjct: 53 GTFVDITNLHYSVTNEELKELAQQFGKVKRAQVEWDKMGR 92
>gi|68471181|ref|XP_720367.1| hypothetical protein CaO19.7076 [Candida albicans SC5314]
gi|77022468|ref|XP_888678.1| hypothetical protein CaO19_7076 [Candida albicans SC5314]
gi|46442232|gb|EAL01523.1| hypothetical protein CaO19.7076 [Candida albicans SC5314]
gi|76573491|dbj|BAE44575.1| hypothetical protein [Candida albicans]
Length = 297
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 45 GRMTGAARRGPLSNARPSSYTIAKSF--RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
GR TG++ + R S T S+ R ++ F D + A G E +Y
Sbjct: 163 GRSTGSSSGYERDSYRSSDTTEKSSYGDRSKSAVANKNSEFTDGVTADG----EKSDTIY 218
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
V+NL +DD+ +LF +G + I + +GRPS ++V F
Sbjct: 219 VANLPFATQDDDLYDLFETVGRTTKAEIQYADDGRPSGNAVVQF 262
>gi|238493741|ref|XP_002378107.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
gi|317157348|ref|XP_003190832.1| nuclear cap-binding protein subunit 2 [Aspergillus oryzae RIB40]
gi|220696601|gb|EED52943.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
Length = 177
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y + K+ +R + Q D D + ++ T LYV NL T + I ELF
Sbjct: 14 RPSAYYLGKNKKRKYS---QDDA--DKVAEDPTDNLKNATTLYVGNLSFYTTEEQIHELF 68
Query: 120 SEIGELKRYAIHFDK 134
S+ GE+KR + D+
Sbjct: 69 SKCGEVKRLVMGLDR 83
>gi|336262864|ref|XP_003346214.1| hypothetical protein SMAC_05751 [Sordaria macrospora k-hell]
gi|380093543|emb|CCC08506.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 836
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS---------- 139
+ IS IE ++L++ NL VT DD+RE F++ G L+ + D GR
Sbjct: 307 SAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEVHVPLDSKGRSKGFAMIRYEKP 366
Query: 140 VSSVACFATFSPLF 153
S++A F T +F
Sbjct: 367 ASAIAAFQTDGTVF 380
>gi|242793052|ref|XP_002482084.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218718672|gb|EED18092.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 330
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 41/156 (26%)
Query: 5 VDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARPSSY 64
+D SL++II R ++ R RGRG G + A R G
Sbjct: 1 MDRSLEEIISERPAKQQNR----------RGRG------SGNNSNAPRDG---------- 34
Query: 65 TIAKSFRRTRNFP--WQHDLFED------------SLRAAGISGIEVGTKLYVSNLHPGV 110
+ KS+R + W HD F+D S R + +L + NLH +
Sbjct: 35 -VKKSYRDRVDLDRDWVHDRFDDIGDSRSSRRDNRSRRDRESPDSDQPARLRIDNLHWDL 93
Query: 111 TNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
T D+ LFS+IG ++R I+FD+ GR ++ +
Sbjct: 94 TEADLEGLFSKIGPVQRVRINFDRAGRSEGTATVTY 129
>gi|452004844|gb|EMD97300.1| hypothetical protein COCHEDRAFT_1164036 [Cochliobolus
heterostrophus C5]
Length = 475
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F
Sbjct: 368 AGGEPSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEF 421
>gi|451853414|gb|EMD66708.1| hypothetical protein COCSADRAFT_158789 [Cochliobolus sativus
ND90Pr]
Length = 477
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG+++R I ++ NGR + V F
Sbjct: 370 AGGEPSNIIYVRNLPWSTSNEDLVELFTTIGKVERAEIQYEPNGRSRGTGVVEF 423
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 40.8 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LYV NL +T+D ++ELFSE G + + D NG S F+T
Sbjct: 310 GLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFST 360
>gi|448510154|ref|XP_003866291.1| hypothetical protein CORT_0A04630 [Candida orthopsilosis Co 90-125]
gi|380350629|emb|CCG20851.1| hypothetical protein CORT_0A04630 [Candida orthopsilosis Co 90-125]
Length = 254
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 15/146 (10%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++ SLDDII +K + R RGRG GP S S R R P S +
Sbjct: 1 MSNILEKSLDDIIGEKKPERKFTPTSR----RGRGGGPISS-SRSRFHRQHRSPPYSRRQ 55
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
P Y I + P + D L A L + N+HP + DD+ +LFS
Sbjct: 56 PDVY-IPRGSPAIETTPSSSSIPPDVLHMANGR-----PTLRLKNIHPELNGDDLNKLFS 109
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACF 146
I ++ I FD+ R + CF
Sbjct: 110 TINDVD--FIKFDE--RNDTIAYICF 131
>gi|71004962|ref|XP_757147.1| hypothetical protein UM01000.1 [Ustilago maydis 521]
gi|46096777|gb|EAK82010.1| hypothetical protein UM01000.1 [Ustilago maydis 521]
Length = 356
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 27/129 (20%)
Query: 39 SGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVG 98
S S +G R +GA+ R N P Y+ A S W+HD ++ AA + G
Sbjct: 76 SSSTAGSRTSGASSRYSPYNRTPR-YSAADS-----EASWKHDRYQPDADAALRPDVRNG 129
Query: 99 T---------------------KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+ KL + NLH V+ D++ LF IG + + I +D++ R
Sbjct: 130 SSRAPLFFPADKAETNDVKPTGKLIIENLHYDVSESDLKNLFESIGPVTKAYIRYDRSDR 189
Query: 138 PSVSSVACF 146
+ +V +
Sbjct: 190 STGVAVVVY 198
>gi|300707142|ref|XP_002995792.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
gi|239605007|gb|EEQ82121.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
Length = 508
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVAC 145
S + G + LY++N+ + DDI E+FSE G + ++I D + C
Sbjct: 295 SFEQLSLEGQNIKRNLYITNIPAFIEKDDIFEIFSEFGSIVSFSIGIDAVNEQRKYAYVC 354
Query: 146 FATFSPLFLWVQ 157
++T F+ ++
Sbjct: 355 YSTSDEAFIAIE 366
>gi|312383688|gb|EFR28676.1| hypothetical protein AND_03065 [Anopheles darlingi]
Length = 524
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 36 RGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGI 95
R P+ + S G P+ +P++Y + S+R H S AG +
Sbjct: 386 RAPNPNESMGIFAKMPPEEPIEQYKPATYVPSSSYR-------MHTPASASPPRAGTNEY 438
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
++ VSNLH VT DI+ELF +IG+L+
Sbjct: 439 ----RIIVSNLHSTVTQQDIQELFEDIGDLQ 465
>gi|239606356|gb|EEQ83343.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
ER-3]
gi|327353068|gb|EGE81925.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 203
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 60 RPSSYTIAKSFRRT---RNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+PS+Y ++K+ RR R+ P + + D L+ A T LYV NL T + I
Sbjct: 43 KPSAYYLSKNKRRKFGDRDGPQEDPV--DPLKDA--------TTLYVGNLSFYTTEEQIH 92
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELF++ GE+KR + D+ + CF +
Sbjct: 93 ELFAKCGEIKRLVMGLDRFAKTPCG--FCFVEY 123
>gi|328350511|emb|CCA36911.1| Polyadenylate-binding protein 1 [Komagataella pastoris CBS 7435]
Length = 413
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ +++SNL T+DD+ EL IG KR I D+NGR S + + F
Sbjct: 301 STIFISNLPWATTDDDLYELVESIGPAKRAEIQLDENGRSSGNGIVEFT 349
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE SL+ A + G LY+ NL + +D + ELFS G++ Y + D+NG S
Sbjct: 302 FEQSLKDA--ADKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKGSG 359
Query: 143 VACFAT 148
F+T
Sbjct: 360 FVAFST 365
>gi|195345533|ref|XP_002039323.1| GM22784 [Drosophila sechellia]
gi|194134549|gb|EDW56065.1| GM22784 [Drosophila sechellia]
Length = 474
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G S + G +L VSNLH VT DIRELFS+IG +
Sbjct: 358 GTSTSKGGYRLLVSNLHTNVTTADIRELFSDIGPV 392
>gi|72087247|ref|XP_787816.1| PREDICTED: polymerase delta-interacting protein 3-like
[Strongylocentrotus purpuratus]
Length = 413
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
GT+L +SNL VT DDI+ELF IGEL +
Sbjct: 269 GTRLIISNLQISVTVDDIKELFGAIGELTK 298
>gi|195567579|ref|XP_002107337.1| GD15616 [Drosophila simulans]
gi|194204743|gb|EDX18319.1| GD15616 [Drosophila simulans]
Length = 435
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G S + G +L VSNLH VT DIRELFS+IG +
Sbjct: 319 GTSTSKGGYRLLVSNLHTNVTTADIRELFSDIGPV 353
>gi|322707987|gb|EFY99564.1| RNP domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 430
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+G E +YV NL +NDD+ +LF+ IG++++ I ++ +GR + V F T
Sbjct: 324 AGTEKSETIYVRNLPWSTSNDDLVDLFTTIGKVEQAEIQYEPSGRSRGTGVVRFDT 379
>gi|195567581|ref|XP_002107338.1| GD15615 [Drosophila simulans]
gi|194204744|gb|EDX18320.1| GD15615 [Drosophila simulans]
Length = 475
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G S + G +L VSNLH VT DIRELFS+IG +
Sbjct: 359 GTSTSKGGYRLLVSNLHTNVTTADIRELFSDIGPV 393
>gi|322701869|gb|EFY93617.1| RNP domain protein [Metarhizium acridum CQMa 102]
Length = 408
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+G E +YV NL +NDD+ +LF+ IG++++ I ++ +GR + V F T
Sbjct: 302 AGTEKSETIYVRNLPWSTSNDDLVDLFTTIGKVEQAEIQYEPSGRSRGTGVVRFDT 357
>gi|254565999|ref|XP_002490110.1| Poly(A+) RNA-binding protein, involved in the export of mRNAs from
the nucleus to the cytoplasm [Komagataella pastoris
GS115]
gi|238029906|emb|CAY67829.1| Poly(A+) RNA-binding protein, involved in the export of mRNAs from
the nucleus to the cytoplasm [Komagataella pastoris
GS115]
Length = 445
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
+ +++SNL T+DD+ EL IG KR I D+NGR S + + F
Sbjct: 333 STIFISNLPWATTDDDLYELVESIGPAKRAEIQLDENGRSSGNGIVEFT 381
>gi|238883218|gb|EEQ46856.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 465
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 45 GRMTGAARRGPLSNARPSSYTIAKSF--RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
GR TG++ + R S T S+ R ++ F D + A G E +Y
Sbjct: 331 GRSTGSSSGYERDSYRSSDTTEKSSYGDRSKSAVVNKNSEFTDGVTADG----EKSDTIY 386
Query: 103 VSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
V+NL +DD+ +LF +G + I + +GRPS ++V F
Sbjct: 387 VANLPFATQDDDLYDLFETVGRTTKAEIQYADDGRPSGNAVVQF 430
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
EV T LYV NL +T D ++++FS +G++ AI D G+
Sbjct: 192 EVFTNLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGK 233
>gi|343426876|emb|CBQ70404.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 277
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 78 WQHDLFEDSLRA-----------------AGISGIEVGTKLYVSNLHPGVTNDDIRELFS 120
W+HD +D +R+ + ++ ++ KL + NLH V+ D+ LF
Sbjct: 39 WKHDRDQDDVRSRRGPRVGRAPMFFPQDKSEVNEVKPTGKLTIENLHWDVSEQDLENLFG 98
Query: 121 EIGELKRYAIHFDKNGRPSVSSVACF 146
IG + + I +D+ RP+ +V +
Sbjct: 99 SIGPVTKAYIKYDRADRPTGVAVVVY 124
>gi|384490751|gb|EIE81973.1| hypothetical protein RO3G_06678 [Rhizopus delemar RA 99-880]
Length = 477
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L VSNLH VT D+ +LF +IG L+R +H NG+
Sbjct: 60 LVVSNLHFNVTEKDLYDLFGQIGSLRRAFLHIGPNGK 96
>gi|170053574|ref|XP_001862738.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874047|gb|EDS37430.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 431
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNLH VT +DIRELF +IG+L
Sbjct: 310 GHRIVVSNLHSSVTQNDIRELFEDIGDL 337
>gi|320588360|gb|EFX00829.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 363
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 46 RMTGAARR----GPLSNARPSSYTIAKSFRRTRN-------FPWQHDLFE---DSLRAAG 91
R G AR GP +R S + +S RN + WQ + E +
Sbjct: 195 RTAGVARADINIGPDGRSRGSGIVVFESPDDARNAIQQFNGYDWQGRVLEVPPNPFTDHA 254
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E ++V NL +N+D+ ELF IG++++ I ++ +GR S V F
Sbjct: 255 TSGNEPSEIIFVRNLPWSTSNEDLVELFGTIGKVEQAEIQYEPSGRSRGSGVVRF 309
>gi|428184064|gb|EKX52920.1| hypothetical protein GUITHDRAFT_161108 [Guillardia theta CCMP2712]
Length = 248
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 78 WQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEI-GELKRYAIHFDKNG 136
+ HD D AA G K+ VSNL PGVT+ D+ EL E G +K I + K+G
Sbjct: 63 YMHDDRTDPEPAAPKELSTAGVKMLVSNLAPGVTDQDLEELCEEHGGPVKSAEIFYKKDG 122
>gi|156042414|ref|XP_001587764.1| hypothetical protein SS1G_11004 [Sclerotinia sclerotiorum 1980]
gi|154695391|gb|EDN95129.1| hypothetical protein SS1G_11004 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 464
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR + V F
Sbjct: 356 ATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRF 411
>gi|353238395|emb|CCA70343.1| hypothetical protein PIIN_04282 [Piriformospora indica DSM 11827]
Length = 301
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 44 GGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDS--LRAAGISGIEVGTKL 101
G RMTG R S A SS + ++F P DS L G S + GT +
Sbjct: 71 GARMTGDVGRQITSGASGSSRLVNRAFAGVLGKPEPKGATSDSGGLSIKGASTL-AGTGV 129
Query: 102 YVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
V L PG T +D+ E+FS G++ + + RP +V F F
Sbjct: 130 EVDGLAPGTTAEDVAEIFSSCGKIVEHRLLT----RPDSPTVRVFLHF 173
>gi|367047383|ref|XP_003654071.1| hypothetical protein THITE_2078523 [Thielavia terrestris NRRL 8126]
gi|347001334|gb|AEO67735.1| hypothetical protein THITE_2078523 [Thielavia terrestris NRRL 8126]
Length = 476
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G+E +YV NL +N+D+ ELFS IG++++ I ++ +GR + V F
Sbjct: 370 AGVEKCDTIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGTGVVRF 423
>gi|336259093|ref|XP_003344351.1| hypothetical protein SMAC_08294 [Sordaria macrospora k-hell]
gi|380092698|emb|CCC09451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 433
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL +N+D+ ELFS IG++++ I ++ +GR S V F
Sbjct: 326 SGTERSEIIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRF 379
>gi|361128764|gb|EHL00690.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 410
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR + V F
Sbjct: 302 ATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRF 357
>gi|302916253|ref|XP_003051937.1| hypothetical protein NECHADRAFT_59730 [Nectria haematococca mpVI
77-13-4]
gi|256732876|gb|EEU46224.1| hypothetical protein NECHADRAFT_59730 [Nectria haematococca mpVI
77-13-4]
Length = 432
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +NDD+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 326 TGTERSETIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 379
>gi|24643116|ref|NP_573325.1| CG6961 [Drosophila melanogaster]
gi|16769518|gb|AAL28978.1| LD35981p [Drosophila melanogaster]
gi|22832522|gb|AAF48885.2| CG6961 [Drosophila melanogaster]
gi|220946798|gb|ACL85942.1| CG6961-PA [synthetic construct]
gi|220956404|gb|ACL90745.1| CG6961-PA [synthetic construct]
Length = 474
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
S + G +L VSNLH VT DIRELFS+IG +
Sbjct: 360 SNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV 392
>gi|15241430|ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|145334719|ref|NP_001078705.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|75338554|sp|Q9XFD1.1|NCBP2_ARATH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=AtCBP20
gi|4768968|gb|AAD29697.1|AF140219_1 nuclear cap-binding protein [Arabidopsis thaliana]
gi|9759521|dbj|BAB10987.1| nuclear cap-binding protein; CBP20 [Arabidopsis thaliana]
gi|28466941|gb|AAO44079.1| At5g44200 [Arabidopsis thaliana]
gi|110735694|dbj|BAE99827.1| nuclear cap-binding protein [Arabidopsis thaliana]
gi|332007690|gb|AED95073.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|332007691|gb|AED95074.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
Length = 257
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + F+++LRA+ T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFSGTQEEFDEALRAS--------TTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF F
Sbjct: 67 LDKNTKTPCG--FCFVLF 82
>gi|255947342|ref|XP_002564438.1| Pc22g03990 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591455|emb|CAP97687.1| Pc22g03990 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 500
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+YV NL N+D+ +LFS IG+++R I ++ NGR + V F T
Sbjct: 399 IYVRNLPWSTCNEDLIDLFSTIGKVERAEIQYEPNGRSRGTGVVQFDT 446
>gi|301091123|ref|XP_002895753.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096665|gb|EEY54717.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 207
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
R G GTK+ V NL + +++RELF +GE+ + I +D++GR + FA
Sbjct: 41 RLGGKDAASPGTKILVKNLKFDILEEEVRELFGTVGEVSKTEIVYDRSGRSKGIARVWFA 100
>gi|366995805|ref|XP_003677666.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
gi|342303535|emb|CCC71315.1| hypothetical protein NCAS_0G04280 [Naumovozyma castellii CBS 4309]
Length = 435
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSP 151
+ G E T +Y SNL P D+ +LF IG+++ + +D+NG + ++ F +
Sbjct: 350 VEGGERNTLIYCSNLPPSTARSDLYDLFESIGKVRNAELKYDRNGETTGVAIVEFISQDD 409
Query: 152 LFLWVQ 157
+ ++
Sbjct: 410 ADVCIE 415
>gi|358054464|dbj|GAA99390.1| hypothetical protein E5Q_06087 [Mixia osmundae IAM 14324]
Length = 392
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+L VS L V D+++LF E G++ R +H D++GRP S + F++
Sbjct: 189 QLIVSGLSDAVGWQDLKDLFRECGDVIRADVHLDEDGRPRGSGMVLFSS 237
>gi|402222219|gb|EJU02286.1| hypothetical protein DACRYDRAFT_116014 [Dacryopinax sp. DJM-731
SS1]
Length = 226
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 71 RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA- 129
RR+R P+ + ++ ++G T+L VS+LH VT ++ LFS +G L +
Sbjct: 17 RRSRGLPYARPTAQPAVTSSG------STRLLVSSLHYEVTEQELNTLFSSLGALAKPPR 70
Query: 130 IHFDKNGR 137
I FD++GR
Sbjct: 71 IVFDRSGR 78
>gi|224133438|ref|XP_002328042.1| predicted protein [Populus trichocarpa]
gi|222837451|gb|EEE75830.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L+ + T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGNQEEFEQALQTS--------TTVYIGNMSFYSTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFVLY 82
>gi|164427086|ref|XP_959532.2| hypothetical protein NCU02404 [Neurospora crassa OR74A]
gi|157071601|gb|EAA30296.2| predicted protein [Neurospora crassa OR74A]
Length = 400
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL +N+D+ ELFS IG++++ I ++ +GR S V F
Sbjct: 293 SGTERSEIIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRF 346
>gi|315050526|ref|XP_003174637.1| nuclear cap-binding protein subunit 2 [Arthroderma gypseum CBS
118893]
gi|311339952|gb|EFQ99154.1| nuclear cap-binding protein subunit 2 [Arthroderma gypseum CBS
118893]
Length = 167
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y K+ RR + + ED +A + ++ T LYV NL T + I ELF
Sbjct: 13 KPSTYFSNKNKRRKSYHDRERE--EDKPQADFDATLKEATTLYVGNLSFYTTEEQIHELF 70
Query: 120 SEIGELKRYAIHFDK 134
++ GE+KR + D+
Sbjct: 71 AKCGEIKRLVMGLDR 85
>gi|336467389|gb|EGO55553.1| hypothetical protein NEUTE1DRAFT_95731 [Neurospora tetrasperma FGSC
2508]
gi|350287968|gb|EGZ69204.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 434
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E +YV NL +N+D+ ELFS IG++++ I ++ +GR S V F
Sbjct: 327 SGTERSEIIYVRNLPWSTSNEDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRF 380
>gi|24643110|ref|NP_573324.1| CG18259 [Drosophila melanogaster]
gi|22832520|gb|AAF48882.2| CG18259 [Drosophila melanogaster]
gi|267844932|gb|ACY79580.1| FI13061p [Drosophila melanogaster]
Length = 474
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
S + G +L VSNLH VT DIRELFS+IG +
Sbjct: 360 SNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV 392
>gi|358374690|dbj|GAA91280.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 337
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G KL V N+H +T D+ +LF+ IG + ++ +D+ GR S F T+S
Sbjct: 88 GAKLRVENIHYDITETDLEDLFTRIGPISNVSLVYDRAGR---SEGVAFVTYS 137
>gi|225678865|gb|EEH17149.1| nuclear cap-binding protein subunit 2 [Paracoccidioides
brasiliensis Pb03]
Length = 177
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y ++K+ RR F + ED + ++ T LYV NL T + I ELF
Sbjct: 10 KPSAYYLSKNKRR--KFGDRDGTQEDP-----VDPLKDATTLYVGNLSFYTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ GE+KR + D+ + CF +
Sbjct: 63 AKCGEIKRLVMGLDRFAKTPCG--FCFVEY 90
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKW 160
LYV N P N+ ++E+FSE GE+K + D G+ C+ P ++
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCY--LDPDHAENAVR- 250
Query: 161 YMPEEVMHLQLLSDTIMYCWMENR 184
MH + + ++YC R
Sbjct: 251 -----TMHGKEIEGRVLYCARAQR 269
>gi|449454985|ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101203985 [Cucumis sativus]
Length = 465
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKR 127
++YVSNL P VT D++RELF IG++ R
Sbjct: 325 RIYVSNLPPDVTTDELRELFGGIGQIGR 352
>gi|219944397|gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944399|gb|ACL54981.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460063|gb|ACN43582.1| nuclear cap-binding protein [Solanum tuberosum]
gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum tuberosum]
Length = 255
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFIMY 82
>gi|154300366|ref|XP_001550599.1| hypothetical protein BC1G_11372 [Botryotinia fuckeliana B05.10]
Length = 493
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR + V F
Sbjct: 385 ATAGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRF 440
>gi|389626725|ref|XP_003711016.1| hypothetical protein MGG_04399 [Magnaporthe oryzae 70-15]
gi|351650545|gb|EHA58404.1| hypothetical protein MGG_04399 [Magnaporthe oryzae 70-15]
Length = 332
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 66 IAKSFR--RTRNFP--WQHDLFEDSLRAAGI-------------SGIEVGTKLYVSNLHP 108
+ KS+R ++RN W HD ++D+ G G GTK+ V N+H
Sbjct: 53 VRKSYRDDQSRNLDSEWVHDRYDDNDSRRGGRYSRRRDDDLDKEQGSSRGTKIRVENIHY 112
Query: 109 GVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
+T +D++ LFS IG + + +D++GR + + + L V+
Sbjct: 113 ELTEEDLQGLFSRIGPIISLELLYDRSGRSEGVAYVTYESHKDATLAVK 161
>gi|449297855|gb|EMC93872.1| hypothetical protein BAUCODRAFT_212912 [Baudoinia compniacensis
UAMH 10762]
Length = 329
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
Query: 78 WQHDLFEDS------------LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
W HD FED AG GTKL V N+H +T +DIR LF G L
Sbjct: 58 WVHDRFEDDRYDHRRPAHEDRYETAGRPRETGGTKLRVDNIHYELTEEDIRGLFERKGPL 117
Query: 126 KRYAIHFDKNGRPSVSSVACFATF 149
+ +D+ R S F T+
Sbjct: 118 VSVKLLYDRADR---SQGTAFVTY 138
>gi|162944864|gb|ABY20501.1| LD25519p [Drosophila melanogaster]
Length = 474
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
S + G +L VSNLH VT DIRELFS+IG +
Sbjct: 360 SNTKDGYRLLVSNLHTNVTTADIRELFSDIGPV 392
>gi|358394283|gb|EHK43676.1| hypothetical protein TRIATDRAFT_300154 [Trichoderma atroviride IMI
206040]
Length = 505
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G E +YV NL +NDD+ ELF+ IG++++ I ++ +GR S V F
Sbjct: 400 GTERNEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGSGVVRF 452
>gi|195134620|ref|XP_002011735.1| GI10924 [Drosophila mojavensis]
gi|193906858|gb|EDW05725.1| GI10924 [Drosophila mojavensis]
Length = 466
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
G +L VSNLH VT DIRELF++IG + Y H RP + V ++
Sbjct: 357 GYRLLVSNLHANVTTADIRELFNDIGPM--YDAHV---VRPGTAEV----------IYKS 401
Query: 158 LKWY-MPEEVMHLQLLSDTIMYCWMEN 183
L+ M E H + M+C + N
Sbjct: 402 LEHAEMAVEAYHQREFDGQPMHCVLVN 428
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 66 IAKSFRRTRNFPWQHDLFEDS--LRAAGISGIEVG-TKLYVSNLHPGVTNDDIRELFSEI 122
+ KS +N W+ +++ L+ + I G KLY+ NLHP + D++++F
Sbjct: 197 MVKSSEAEKNLAWEAAQAQNASMLQMSTIGNAGTGPCKLYIGNLHPNIQEQDLKQVFEAF 256
Query: 123 GELKRYAIHFDKNGR 137
G ++ + D GR
Sbjct: 257 GAVEYITLQKDPTGR 271
>gi|348686699|gb|EGZ26513.1| hypothetical protein PHYSODRAFT_470000 [Phytophthora sojae]
Length = 209
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
R G GTK+ V NL + +++RELF +GE+ + I +D++GR
Sbjct: 42 RLGGKDAASPGTKILVKNLKFDILEEEVRELFGTVGEVSKAEIVYDRSGR 91
>gi|261190116|ref|XP_002621468.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
SLH14081]
gi|239591296|gb|EEQ73877.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
SLH14081]
Length = 177
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 60 RPSSYTIAKSFRRT---RNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
+PS+Y ++K+ RR R+ P + + D L+ A T LYV NL T + I
Sbjct: 44 KPSAYYLSKNKRRKFGDRDGPQEDPV--DPLKDA--------TTLYVGNLSFYTTEEQIH 93
Query: 117 ELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELF++ GE+KR + D+ + CF +
Sbjct: 94 ELFAKCGEIKRLVMGLDRFAKTPCG--FCFVEY 124
>gi|224460059|gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFIMY 82
>gi|348506826|ref|XP_003440958.1| PREDICTED: paraspeckle component 1-like [Oreochromis niloticus]
Length = 517
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G+ L V NL P VTN+ + + FS+ G ++R + D GRP+ + FA
Sbjct: 158 GSALTVRNLLPVVTNELLEQAFSQFGPVERAIVVTDDRGRPTGRGIVEFAN 208
>gi|22859166|emb|CAD30681.1| RNA and export factor binding protein 2 [Drosophila melanogaster]
Length = 220
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 42/145 (28%)
Query: 1 MATHVDMSLDDIIKSRKKSER------ERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ + MSLDDIIK + + ER QG R R G RG S +G TG
Sbjct: 1 MSDKMKMSLDDIIKMKFNKNKFVNANNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 57
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ P + + T + V NL GV
Sbjct: 58 RKSKFKQETP------------------------------LKPPKKPTLVMVCNLDYGVD 87
Query: 112 NDDIRELFSEIGELKRYAIHFDKNG 136
+DDI ELF++ G +++ +H+D++G
Sbjct: 88 DDDIMELFNQDGVVEKGFVHYDRDG 112
>gi|452840135|gb|EME42073.1| hypothetical protein DOTSEDRAFT_72991 [Dothistroma septosporum
NZE10]
Length = 506
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+SG E ++V NL +N+D+ ELF IG +++ I ++ NGR S V F++
Sbjct: 400 GAVSGGEPNPIIHVKNLPWSTSNEDLVELFQTIGTVEQAEIQYEGNGRSRGSGVVRFSS 458
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
T+++VSN+ G D+++LF + G + R +H +G P S V F T
Sbjct: 231 TQIFVSNVPFGAGWQDLKDLFRQAGNVVRADVHTSPDGHPKGSGVVAFDT 280
>gi|226293700|gb|EEH49120.1| nuclear cap-binding protein subunit 2 [Paracoccidioides
brasiliensis Pb18]
Length = 170
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y ++K+ RR F + ED + ++ T LYV NL T + I ELF
Sbjct: 10 KPSAYYLSKNKRR--KFGDRDGTQEDP-----VDPLKDATTLYVGNLSFYTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ GE+KR + D+ + CF +
Sbjct: 63 AKCGEIKRLVMGLDRFAKTPCG--FCFVEY 90
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 39.7 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
GT LYV NL + +D ++ELFSE G + + + NGR
Sbjct: 287 GTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGR 326
>gi|225559401|gb|EEH07684.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
G186AR]
Length = 172
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y ++K +R ++ D + I ++ T LYV NL T + I ELF
Sbjct: 11 KPSAYYLSKQNKRRKHGD------RDGPQEDPIDPLKDATTLYVGNLSFYTTEEQIHELF 64
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ GE+KR + D+ + CF +
Sbjct: 65 AKCGEIKRLVMGLDRFAKTPCG--FCFVEY 92
>gi|219944401|gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944403|gb|ACL54983.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460057|gb|ACN43579.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFIMY 82
>gi|339899270|ref|XP_003392812.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|389594783|ref|XP_003722614.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|398023283|ref|XP_003864803.1| RNA-binding protein, putative [Leishmania donovani]
gi|321398747|emb|CBZ09015.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|322503039|emb|CBZ38123.1| RNA-binding protein, putative [Leishmania donovani]
gi|323363842|emb|CBZ12848.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 274
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
EVG KL+VSNL TN +RE F ++G ++R I +NG+
Sbjct: 192 EVGRKLFVSNLPFDCTNSALRETFQQVGLVERAEIILGRNGK 233
>gi|297791443|ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
gi|297309441|gb|EFH39865.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + F+++LRA+ T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFSGTQEEFDEALRAS--------TTVYIGNVSFYTTEEQLYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF F
Sbjct: 67 LDKNTKTPCG--FCFVLF 82
>gi|354545262|emb|CCE41989.1| hypothetical protein CPAR2_805380 [Candida parapsilosis]
Length = 454
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G E +YV NL NDD+ +LF IG++ I + ++GR S ++V F +
Sbjct: 368 GDEPNDTIYVENLPFSTQNDDLFDLFETIGKVSNAEIQYQEDGRASGNAVVQFES 422
>gi|154344761|ref|XP_001568322.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065659|emb|CAM43430.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 275
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
EVG KL+VSNL TN +RE F ++G ++R I +NG+
Sbjct: 193 EVGRKLFVSNLPFDCTNSALRETFQQVGLVERAEIILGRNGK 234
>gi|401429468|ref|XP_003879216.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495466|emb|CBZ30771.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 274
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
EVG KL+VSNL TN +RE F ++G ++R I +NG+
Sbjct: 192 EVGRKLFVSNLPFDCTNSALRETFQQVGLVERAEIILGRNGK 233
>gi|398396806|ref|XP_003851861.1| hypothetical protein MYCGRDRAFT_104845 [Zymoseptoria tritici
IPO323]
gi|339471741|gb|EGP86837.1| hypothetical protein MYCGRDRAFT_104845 [Zymoseptoria tritici
IPO323]
Length = 498
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
SG + ++V NL +NDD+ ELF IG + R I ++ NGR + V F +
Sbjct: 395 SGGQPNAIIHVKNLPWSTSNDDLVELFQTIGTVDRAEIQYEANGRSRGAGVVQFGS 450
>gi|320590561|gb|EFX03004.1| small subunit of nuclear cap-binding protein complex [Grosmannia
clavigera kw1407]
Length = 218
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 60 RPSSYTIAKSFRRTRN------FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTND 113
RPS+Y K RR + P + +D LR A T LYV NL T +
Sbjct: 16 RPSAYFNNKKRRRDNHGRGEDEVPDKPQAIDDPLRNA--------TTLYVGNLSFYTTEE 67
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+ ELFS+ GE+KR + D+ + CF +
Sbjct: 68 QVYELFSKCGEIKRLVMGLDRFNKTPCG--FCFVEY 101
>gi|448123377|ref|XP_004204677.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|448125660|ref|XP_004205235.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358249868|emb|CCE72934.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358350216|emb|CCE73495.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+SG++VG KL++ NLHP V +R+ FS+ G + R
Sbjct: 115 MSGVDVGAKLFIKNLHPLVDEKMLRDTFSKFGNIIR 150
>gi|255553647|ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
gi|223542846|gb|EEF44382.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
Length = 255
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L + T +Y+ N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRKFPGNQEEFEHALLTS--------TTVYIGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF F
Sbjct: 67 LDKNTKTPCG--FCFVLF 82
>gi|156382309|ref|XP_001632496.1| predicted protein [Nematostella vectensis]
gi|156219553|gb|EDO40433.1| predicted protein [Nematostella vectensis]
Length = 346
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
+ T++ +SNLHP V+ DI ELF IG LK
Sbjct: 218 QTSTRVTISNLHPAVSRQDIEELFGAIGVLK 248
>gi|225711646|gb|ACO11669.1| Polymerase delta-interacting protein 3 [Caligus rogercresseyi]
Length = 367
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI 130
G K+ V NLH VT +DI ELF ++G LKR +
Sbjct: 294 GAKVVVGNLHNTVTQEDIVELFGDVGPLKRVKV 326
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
T+LYV NLH + DD+R +F G++++ +H D
Sbjct: 271 TRLYVGNLHTDLAEDDLRTVFEPFGDIQQINLHID 305
>gi|83772288|dbj|BAE62418.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 246
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
G KL + NLH +T D+ +LF+ IG + ++ +D+ GR S F T+
Sbjct: 8 TGAKLRIENLHYDITESDLEDLFTRIGPISNLSLVYDRAGR---SEGVAFVTY 57
>gi|345564008|gb|EGX46990.1| hypothetical protein AOL_s00097g229 [Arthrobotrys oligospora ATCC
24927]
Length = 516
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++V NL +NDD+ ELF+ IG+++R I ++ +GR + V F T
Sbjct: 419 IFVRNLPWSTSNDDLVELFTTIGKVERAEIQYEPSGRSRGTGVVQFDT 466
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+++VSNL V D++++F + G + R +H +GRP S + F T
Sbjct: 246 QIFVSNLPFHVGWQDLKDMFRQAGSVVRADVHVGHDGRPKGSGIVAFET 294
>gi|29841435|gb|AAP06467.1| similar to GenBank Accession Number AJ298278 poly(A) binding
protein in Rattus norvegicus [Schistosoma japonicum]
Length = 307
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
LYV N P N+ ++E+FSE GE+K + D G+ C+
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCY 239
>gi|260940088|ref|XP_002614344.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
gi|238852238|gb|EEQ41702.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL-KRYAIHFDKNGRPSVSSVACFATF 149
SG+ VG +L+V NL+P V +RE F++ G L R + D+NG P F+ F
Sbjct: 103 SGLSVGARLFVGNLNPLVDEQYLRETFNKFGALVGRPVLARDENGTPKGHGFVEFSDF 160
>gi|347841226|emb|CCD55798.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR + V F
Sbjct: 217 AGTERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRF 270
>gi|296816745|ref|XP_002848709.1| RNA binding domain-containing protein [Arthroderma otae CBS 113480]
gi|238839162|gb|EEQ28824.1| RNA binding domain-containing protein [Arthroderma otae CBS 113480]
Length = 333
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
G K+ V+N+H +T +D+ ELF+ IG + ++ +D+ GR S F T+ L
Sbjct: 99 GAKIRVNNIHYDLTQEDLEELFTRIGPVHSVSLLYDRAGR---SEGVAFVTYKRL 150
>gi|212535436|ref|XP_002147874.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210070273|gb|EEA24363.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 329
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 66 IAKSFRRTRNFP--WQHDLFEDS------------LRAAGISGIEVGTKLYVSNLHPGVT 111
+ KS+R + W HD FED+ R + +L + NLH +T
Sbjct: 32 VKKSYRDRVDLDRDWVHDRFEDTGDSRSSRRDNRSRRERESPDSDQPARLRIENLHWDLT 91
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+D+ LF IG ++R I+FD+ GR ++ +
Sbjct: 92 EEDLEGLFGNIGPVQRVRINFDRAGRSEGTATVTY 126
>gi|344234704|gb|EGV66572.1| hypothetical protein CANTEDRAFT_117619 [Candida tenuis ATCC 10573]
Length = 472
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 74 RNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
+N + D+ D L++ I YV NL T DD+ ELF IG++ R I +
Sbjct: 332 KNTKFTKDIIADGLKSDTI---------YVENLPYVTTVDDLYELFETIGKVTRAEIQYA 382
Query: 134 KNGRPSVSSVACFAT 148
+GR S ++V F +
Sbjct: 383 PHGRASGNAVVRFES 397
>gi|261331803|emb|CBH14797.1| DRBD2 [Trypanosoma brucei gambiense DAL972]
Length = 301
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
EVG KL+VSNL T+ +RE F ++GE++R I +NG+ + T
Sbjct: 218 EVGRKLFVSNLPFDCTSVALRETFQQVGEVERAEIIMGRNGKSRGMGIVVMKT 270
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 39.3 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LYV NL +T+D ++ELFSE G + + D NG S ++T
Sbjct: 310 GLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYST 360
>gi|409048571|gb|EKM58049.1| hypothetical protein PHACADRAFT_206888 [Phanerochaete carnosa
HHB-10118-sp]
Length = 234
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 68 KSFRRTRNFP------WQHDLF-------EDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
K + R+ N P W HD + + A+ + TKL VSNLH VT D
Sbjct: 11 KPYSRSANRPRRSDGDWLHDKAPGVAPARQSAPTASTAADASPNTKLLVSNLHYEVTPKD 70
Query: 115 IRELFSEIGELKRYA-IHFDKNGRPSVSSVACFATFS 150
+ ++F IG L R I +D++GR + ++ + T +
Sbjct: 71 LTQVFGIIGTLVREPLIRYDRSGRSTGIAIISYETAA 107
>gi|195041113|ref|XP_001991195.1| GH12198 [Drosophila grimshawi]
gi|193900953|gb|EDV99819.1| GH12198 [Drosophila grimshawi]
Length = 470
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
++ + G +L VSNLH VT DIRELF++IG +
Sbjct: 355 VANNKPGYRLLVSNLHTNVTTSDIRELFNDIGPM 388
>gi|71745988|ref|XP_827596.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831761|gb|EAN77266.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 305
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
EVG KL+VSNL T+ +RE F ++GE++R I +NG+ + T
Sbjct: 222 EVGRKLFVSNLPFDCTSVALRETFQQVGEVERAEIIMGRNGKSRGMGIVVMKT 274
>gi|426195373|gb|EKV45303.1| hypothetical protein AGABI2DRAFT_194268 [Agaricus bisporus var.
bisporus H97]
Length = 243
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSVSSVACFATFS 150
K+ VSNLH +T D+ +F +IG L R I +D++GR S ++ F T +
Sbjct: 56 KILVSNLHYEITPKDLNVIFGQIGTLIREPLIRYDRSGRSSGQAIVSFETVA 107
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 52 RRGPLSNARPSSYTIAK-SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
R GP SN PS+ + K S++ + +HD T ++V NL P V
Sbjct: 231 RIGPASNKNPSTQSQPKASYQNPQGAQNEHD--------------PNNTTIFVGNLDPNV 276
Query: 111 TNDDIRELFSEIGELKRYAI 130
T+D +R++F + GEL I
Sbjct: 277 TDDHLRQVFGQYGELVHVKI 296
>gi|212532775|ref|XP_002146544.1| small subunit of nuclear cap-binding protein complex [Talaromyces
marneffei ATCC 18224]
gi|210071908|gb|EEA25997.1| small subunit of nuclear cap-binding protein complex [Talaromyces
marneffei ATCC 18224]
Length = 174
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 60 RPSSYTIAKS--FRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRE 117
RPS+Y +KS R +H+ DSLR A T LYV NL T + I E
Sbjct: 13 RPSAYYQSKSKRRRYNDRDDDKHEDPNDSLRNA--------TTLYVGNLSFYTTEEQIHE 64
Query: 118 LFSEIGELKRYAIHFDK 134
LF++ GE+KR + D+
Sbjct: 65 LFAKCGEIKRLVMGLDR 81
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 52 RRGPLSNARPSSYTIAK-SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
R GP +N P++ T AK S+ T ++D T ++V NL P V
Sbjct: 225 RIGPATNKNPAATTQAKASYSNTPGGQSEND--------------PNNTTIFVGNLDPNV 270
Query: 111 TNDDIRELFSEIGELKRYAI 130
T+D +R++FS+ GEL I
Sbjct: 271 TDDHLRQVFSQYGELVHVKI 290
>gi|340518827|gb|EGR49067.1| predicted protein [Trichoderma reesei QM6a]
Length = 493
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +NDD+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 387 AGTERSEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 440
>gi|113675176|ref|NP_001038723.1| paraspeckle component 1 [Danio rerio]
gi|123912695|sp|Q1JPY8.1|PSPC1_DANRE RecName: Full=Paraspeckle component 1
gi|94574327|gb|AAI16550.1| Paraspeckle component 1 [Danio rerio]
Length = 512
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G L V NL P V+N+ + + FS+ G ++R + D GRP+ + FA
Sbjct: 149 GAALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFAN 199
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LYV NL +++D++RE F+E G + + D NG CF+T
Sbjct: 277 GVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFST 327
>gi|259145620|emb|CAY78884.1| Yra1p [Saccharomyces cerevisiae EC1118]
Length = 226
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 30/142 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGP---SGSVSGGRMTGAARRGPL- 56
M+ ++D SLD+II S K G RAR G RG GP V R + RRGP+
Sbjct: 1 MSANLDKSLDEIIGSNKA-----GNNRARVGGTRGNGPRRVGKQVGSQRRSLPNRRGPIR 55
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
N R +A+ + D+ R K+ V L + D +R
Sbjct: 56 KNTRAPPNAVARVAK-----------LLDTTRE---------VKVNVEGLPRDIKQDAVR 95
Query: 117 ELF-SEIGELKRYAIHFDKNGR 137
E F S++G ++R + +++ G+
Sbjct: 96 EFFASQVGGVQRVLLSYNERGQ 117
>gi|425768949|gb|EKV07460.1| hypothetical protein PDIG_73210 [Penicillium digitatum PHI26]
gi|425776211|gb|EKV14439.1| hypothetical protein PDIP_43690 [Penicillium digitatum Pd1]
Length = 491
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+YV NL N+D+ +LFS IG++ R I ++ NGR + V F T
Sbjct: 391 IYVRNLPWSTCNEDLIDLFSTIGKVDRAEIQYEPNGRSRGTGVVQFDT 438
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+ LYV NL P ++++ ++E+FS G + + D NG S FAT
Sbjct: 302 SNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFAT 351
>gi|295660180|ref|XP_002790647.1| nuclear cap-binding protein subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281522|gb|EEH37088.1| nuclear cap-binding protein subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 217
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS+Y ++K+ RR F + ED + ++ T LYV NL T + I ELF
Sbjct: 57 KPSAYYLSKNKRR--KFGDRDGTQEDP-----VDPLKDATTLYVGNLSFYTTEEQIHELF 109
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ GE+KR + D+ + CF +
Sbjct: 110 AKCGEIKRLVMGLDRFAKTPCG--FCFVEY 137
>gi|409077031|gb|EKM77399.1| hypothetical protein AGABI1DRAFT_115306 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 243
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYA-IHFDKNGRPSVSSVACFATFS 150
K+ VSNLH +T D+ +F +IG L R I +D++GR S ++ F T +
Sbjct: 56 KILVSNLHYEITPKDLNVIFGQIGTLIREPLIRYDRSGRSSGQAIVSFETVA 107
>gi|317029023|ref|XP_001390966.2| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 480
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 371 SGGDKSAVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 424
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 218 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 269
>gi|317029025|ref|XP_003188692.1| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 428
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 319 SGGDKSAVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 372
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 166 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 217
>gi|346322611|gb|EGX92210.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 285
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
GT++ V N+H +T +D+ ELF IG + R + FD+ GR S F T+
Sbjct: 65 GTRIKVHNVHYDLTEEDLGELFRRIGRVLRLQLKFDRAGR---SEGIAFVTYE 114
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQL 158
LY+ N P N+ ++E+F+E GE+K + D G+ CF P +
Sbjct: 192 NNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCF--LDPDHAENAV 249
Query: 159 KWYMPEEVMHLQLLSDTIMYCWMENR 184
K MH + + +YC R
Sbjct: 250 K------TMHGKEIEGRALYCARAQR 269
>gi|350630184|gb|EHA18557.1| hypothetical protein ASPNIDRAFT_52545 [Aspergillus niger ATCC 1015]
Length = 486
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 377 SGGDKSAVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 430
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 224 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 275
>gi|429852984|gb|ELA28088.1| rnp domain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 415
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + G +YV NL +N+D+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 308 AGTDRGETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 361
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+YV N P T++ +R++FSE GE+K + + G+ CF
Sbjct: 182 IYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGKSKGFGFVCF 227
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 88 RAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
RA +S G LYV NL + ++ ++E FS G + + D NGR CF
Sbjct: 273 RAERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHYGPITSAKVMTDANGRSKGFGFVCF 331
>gi|113204845|gb|ABI34156.1| IP02067p [Drosophila melanogaster]
Length = 220
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 42/145 (28%)
Query: 1 MATHVDMSLDDIIKSR------KKSERERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ ++ MSLDDIIK + ++ ER QG R R G RG S +G TG
Sbjct: 1 MSDNMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 57
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ T+ K ++ T + V NL GV
Sbjct: 58 RKSKFKQE-----TLLKPPKKP-------------------------TLVMVCNLDYGVD 87
Query: 112 NDDIRELFSEIGELKRYAIHFDKNG 136
+DDI ELF++ G +++ +H+D++G
Sbjct: 88 DDDIMELFNQDGVVEKGFVHYDRDG 112
>gi|406862056|gb|EKD15108.1| RNP domain protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 397
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G E +YV NL +N+D+ ELF+ IG++++ I ++ NGR + V F
Sbjct: 294 AGSERSEIIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRF 347
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQL 158
LY+ N P N+ ++E+F+E GE+K + D G+ CF P +
Sbjct: 192 NNLYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCF--LDPDHAENAV 249
Query: 159 KWYMPEEVMHLQLLSDTIMYCWMENR 184
K MH + + +YC R
Sbjct: 250 K------TMHGKEIEGRALYCARAQR 269
>gi|154278026|ref|XP_001539839.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413424|gb|EDN08807.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 434
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
SG E +YV NL N+D+ +LFS IG++++ I ++ NGR
Sbjct: 371 ATSGGERSATIYVRNLPWSTCNEDLVDLFSTIGKVEKAEIQYEPNGR 417
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G ++YVSNL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 217 GRQIYVSNLPFNVGWQDLKDLFRQAAQHGAVVRADVHVDPSGRPKGSGIVAFES 270
>gi|356549892|ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
Length = 258
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L + T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEHALVTS--------TTVYVGNMSFYTTEEQVYELFSRTGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNTKTPCG--FCFVLY 82
>gi|167538131|ref|XP_001750731.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770755|gb|EDQ84436.1| predicted protein [Monosiga brevicollis MX1]
Length = 218
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
TKL VSNL V +D+RELF + G L+ +++D++GR ++ F
Sbjct: 13 TKLLVSNLAFDVLEEDLRELFGKHGALRACNMNYDRSGRSQGTAEVIF 60
>gi|412990463|emb|CCO19781.1| hypothetical protein CHLNCDRAFT_137899 [Bathycoccus prasinos]
Length = 230
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 22/79 (27%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI----------------HFDKNGRPSVS 141
G +LY+S LH V+ D++ELF G++K I HF+ N +
Sbjct: 3 GVRLYISGLHQTVSEQDLKELFKPFGQIKNVQIARCKELNYQSFCRGFAHFEINFSSQEA 62
Query: 142 SVACFATFSPLFLWVQLKW 160
+ C LF++ KW
Sbjct: 63 QIRC------LFMYNGCKW 75
>gi|195472401|ref|XP_002088489.1| GE12174 [Drosophila yakuba]
gi|194174590|gb|EDW88201.1| GE12174 [Drosophila yakuba]
Length = 249
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
T L V NL GV +DDI ELF+E G +++ +H+D+ G
Sbjct: 67 TFLMVCNLDYGVNDDDIMELFNESGLVQQGLVHYDREG 104
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LYV NL +++D++RE F+E G + + D NG CF+T
Sbjct: 331 GVNLYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFST 381
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
T LYV NL PG+T + ++E FSE G++ AI D+ G
Sbjct: 192 TNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECG 229
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G+ +YV N+ VT++++RE FS+ G + + D GR CF++
Sbjct: 294 GSNVYVKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSS 344
>gi|363808374|ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
gi|255647255|gb|ACU24095.1| unknown [Glycine max]
Length = 235
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FE +L + T +YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEHALLTS--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNTKTPCG--FCFVLY 82
>gi|385303131|gb|EIF47224.1| rna binding domain-containing protein [Dekkera bruxellensis
AWRI1499]
Length = 254
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L VSNLHP +T D+ ELFS IGE K + + G+
Sbjct: 59 LRVSNLHPDLTEKDLXELFSRIGEXKFVKLEMNTRGQ 95
>gi|336274132|ref|XP_003351820.1| hypothetical protein SMAC_00366 [Sordaria macrospora k-hell]
Length = 309
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF-SPLFLWV 156
G+K+ V N+H +T +D+ LFS IG L + + +D+ GR S F T+ SP
Sbjct: 71 GSKIRVDNIHYELTQEDLEGLFSRIGPLVKLDMKYDRAGR---SEGTAFVTYESPQDASR 127
Query: 157 QLKWY 161
++ Y
Sbjct: 128 AIREY 132
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 38.9 bits (89), Expect = 0.82, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE SL+ E G LYV NL +++D ++ELFSE G + + D NG S
Sbjct: 308 FEQSLKETA-DKFE-GLNLYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSG 365
Query: 143 VACFAT 148
F+T
Sbjct: 366 FVAFST 371
>gi|46136649|ref|XP_390016.1| hypothetical protein FG09840.1 [Gibberella zeae PH-1]
Length = 591
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + G +YV NL +NDD+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 386 AGSDRGEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 439
>gi|6320589|ref|NP_010669.1| Yra1p [Saccharomyces cerevisiae S288c]
gi|3123158|sp|Q12159.2|YRA1_YEAST RecName: Full=RNA annealing protein YRA1
gi|1912464|gb|AAC09951.1| RNA annealing protein Yra1p [Saccharomyces cerevisiae]
gi|151942355|gb|EDN60711.1| RNA-binding RNA annealing protein [Saccharomyces cerevisiae YJM789]
gi|190404682|gb|EDV07949.1| RNA annealing protein YRA1 [Saccharomyces cerevisiae RM11-1a]
gi|285811400|tpg|DAA12224.1| TPA: Yra1p [Saccharomyces cerevisiae S288c]
gi|349577433|dbj|GAA22602.1| K7_Yra1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 226
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 30/142 (21%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGP---SGSVSGGRMTGAARRGPL- 56
M+ ++D SLD+II S K G RAR G RG GP V R + RRGP+
Sbjct: 1 MSANLDKSLDEIIGSNKA-----GSNRARVGGTRGNGPRRVGKQVGSQRRSLPNRRGPIR 55
Query: 57 SNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIR 116
N R +A R A + K+ V L + D +R
Sbjct: 56 KNTRAPPNAVA--------------------RVAKLLDTTREVKVNVEGLPRDIKQDAVR 95
Query: 117 ELF-SEIGELKRYAIHFDKNGR 137
E F S++G ++R + +++ G+
Sbjct: 96 EFFASQVGGVQRVLLSYNERGQ 117
>gi|408390063|gb|EKJ69476.1| hypothetical protein FPSE_10356 [Fusarium pseudograminearum CS3096]
Length = 564
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + G +YV NL +NDD+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 458 AGSDRGEIIYVRNLPWSTSNDDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 511
>gi|224460061|gb|ACN43581.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R FP + FED+L + I V YV N+ T + + ELFS GE+K+ +
Sbjct: 15 RDRRFPGTQEEFEDAL----LRSITV----YVGNMSFYTTEEQVYELFSRAGEIKKIVMG 66
Query: 132 FDKNGR 137
DKN +
Sbjct: 67 LDKNSK 72
>gi|358371386|dbj|GAA87994.1| RNP domain protein, partial [Aspergillus kawachii IFO 4308]
Length = 335
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LFS IG++ R I ++ NGR + V F
Sbjct: 225 SGGDKSAVIYVRNLPWSTCNEDLVDLFSTIGKVDRAEIQYEPNGRSRGTGVVQF 278
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACF 146
+LYVSNL V D+++LF ++ G + R +H D GRP S + F
Sbjct: 72 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAF 121
>gi|317149624|ref|XP_001823550.2| alpha-actinin, sarcomeric (f-actin cross linking protein)
[Aspergillus oryzae RIB40]
Length = 904
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
G KL + NLH +T D+ +LF+ IG + ++ +D+ GR S F T+
Sbjct: 666 TGAKLRIENLHYDITESDLEDLFTRIGPISNLSLVYDRAGR---SEGVAFVTY 715
>gi|134058021|emb|CAK38250.1| unnamed protein product [Aspergillus niger]
Length = 333
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G KL V N+H +T D+ +LF+ IG + ++ +D+ GR S F T++
Sbjct: 85 GAKLRVENIHYDITETDLEDLFTRIGPISNVSLVYDRAGR---SEGVAFVTYT 134
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 38.9 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N+ P VT DD RELF + G++ ++ D+ G+
Sbjct: 240 TNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGK 278
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
LY+ N P N+ ++E+F+E GE+K + D G+ CF
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCF 239
>gi|403337558|gb|EJY68001.1| RNA-binding region RNP-1 domain-containing protein [Oxytricha
trifallax]
Length = 683
Score = 38.9 bits (89), Expect = 0.90, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 7/151 (4%)
Query: 15 SRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGP--LSNARPSSYTIAKSFRR 72
S ++ + + G G P G ++ G+ P +SN +P++ TI
Sbjct: 2 SYQQRQNQHGSQSVIASSGYQLNPVGLLTSGQQFAQQHHMPQNMSNQQPTTTTIL----- 56
Query: 73 TRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHF 132
P Q + E L+ +E KLYV + VT+D + LF G+L +
Sbjct: 57 VNPPPSQRSIAEQYLKPIPTLNMEENRKLYVGKIPKNVTDDFMERLFRCCGQLISWKRST 116
Query: 133 DKNGRPSVSSVACFATFSPLFLWVQLKWYMP 163
D +G P F +F +++ +P
Sbjct: 117 DASGEPKAFGFVEFENIESVFACLKIINNLP 147
>gi|406864547|gb|EKD17592.1| nuclear cap binding protein subunit 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 178
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 47 MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDL-------FEDSLRAAGISGIEVGT 99
M GA R +PS+Y +++ + RN+ D ED L+ A T
Sbjct: 1 MPGAVRNTVDRLDKPSAYYQSRN--KKRNYSRDDDRDRTPEEPAEDPLKDA--------T 50
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
LYV NL T + I ELFS+ GE+KR + D+ + CF +
Sbjct: 51 TLYVGNLSFYTTEEQIHELFSKCGEIKRLIMGLDRFSKTPCG--FCFVEY 98
>gi|384248092|gb|EIE21577.1| cap-binding protein, partial [Coccomyxa subellipsoidea C-169]
Length = 145
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + FE LR + T LYV NL T + I E+FS G++KR +
Sbjct: 5 RDRRFVGTQEDFEKCLRES--------TTLYVGNLSFYTTEEQIYEVFSRAGDIKRIIMG 56
Query: 132 FDKN 135
DKN
Sbjct: 57 LDKN 60
>gi|156403590|ref|XP_001639991.1| predicted protein [Nematostella vectensis]
gi|156227123|gb|EDO47928.1| predicted protein [Nematostella vectensis]
Length = 91
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
G L+V+N+H DDI ELFS+ GE+K ++ D+
Sbjct: 4 GWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDR 40
>gi|195403219|ref|XP_002060192.1| GJ18567 [Drosophila virilis]
gi|194141036|gb|EDW57462.1| GJ18567 [Drosophila virilis]
Length = 460
Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
G +L VSNLH VT DIRELF++IG + Y H + G V
Sbjct: 351 GYRLLVSNLHANVTTADIRELFNDIGPM--YDAHVVRPGTAEV 391
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 38.9 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 29 RRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP---SSYTIAKSFRRTRNFPWQHDLFED 85
R G G+ +G G V+ AAR N + + + K+ +++ FE
Sbjct: 257 RDGEGKSKG-FGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQ 315
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVAC 145
SL+ A + G+ LYV NL VT+D +RE F+ G + + D +G S
Sbjct: 316 SLKEA--ADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVA 373
Query: 146 FAT 148
F+T
Sbjct: 374 FST 376
>gi|156350360|ref|XP_001622249.1| predicted protein [Nematostella vectensis]
gi|156208737|gb|EDO30149.1| predicted protein [Nematostella vectensis]
Length = 88
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
G L+V+N+H DDI ELFS+ GE+K ++ D+
Sbjct: 4 GWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDR 40
>gi|156397171|ref|XP_001637765.1| predicted protein [Nematostella vectensis]
gi|156224880|gb|EDO45702.1| predicted protein [Nematostella vectensis]
Length = 124
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
G L+V+N+H DDI ELFS+ GE+K ++ D+
Sbjct: 37 GWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDR 73
>gi|157120372|ref|XP_001653631.1| hypothetical protein AaeL_AAEL008938 [Aedes aegypti]
gi|108875012|gb|EAT39237.1| AAEL008938-PB [Aedes aegypti]
Length = 402
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNLH VT +DI+ELF +IG+L
Sbjct: 314 TGYRIVVSNLHGSVTQNDIKELFEDIGDL 342
>gi|407921975|gb|EKG15108.1| hypothetical protein MPH_07705 [Macrophomina phaseolina MS6]
Length = 282
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 19/91 (20%)
Query: 78 WQHDLFEDS----------------LRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
W HD +ED R + E G KL V NLH +T +DI ELF
Sbjct: 6 WVHDRYEDDDSRRPSRNRGPRSERLARRTPDTEREPGYKLRVENLHYDLTEEDILELFER 65
Query: 122 IGELKRYAIHFDKNGRPSVSSVACFATFSPL 152
IG ++ + +D++ R S+ F + L
Sbjct: 66 IGPVEDAKLVYDRSDR---STGVAFVVYRSL 93
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ NL + +D +RELFS G++ + D+NG S F+T
Sbjct: 321 GLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFST 371
>gi|443702054|gb|ELU00216.1| hypothetical protein CAPTEDRAFT_169883 [Capitella teleta]
Length = 431
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G L V +L P VTN+ + E FS GEL+R + D G+ + + FA
Sbjct: 100 GAALKVLHLSPHVTNEKLEEAFSMFGELERAVVIVDDRGKSTGEGIVEFA 149
>gi|317028251|ref|XP_001390338.2| alpha-actinin, sarcomeric (f-actin cross linking protein)
[Aspergillus niger CBS 513.88]
Length = 915
Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G KL V N+H +T D+ +LF+ IG + ++ +D+ GR S F T++
Sbjct: 667 GAKLRVENIHYDITETDLEDLFTRIGPISNVSLVYDRAGR---SEGVAFVTYT 716
>gi|226293434|gb|EEH48854.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 478
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E ++V NL N+D+ +LFS IG+++R I ++ NGR + V F
Sbjct: 371 SGGERSAIIFVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEF 424
>gi|156033107|ref|XP_001585390.1| hypothetical protein SS1G_13629 [Sclerotinia sclerotiorum 1980]
gi|154699032|gb|EDN98770.1| hypothetical protein SS1G_13629 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 181
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 47 MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
M G+ R +PS+Y ++ +R + D E + ++ T LYV NL
Sbjct: 1 MPGSIRNTVDRLDKPSAYYQGRNKKRRYERDGEDDRRERTPEEPADDPLKDATTLYVGNL 60
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
T + I ELF++ GE+KR + D+ + CF +
Sbjct: 61 SFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPCG--FCFVEY 101
>gi|432849673|ref|XP_004066618.1| PREDICTED: paraspeckle component 1-like [Oryzias latipes]
Length = 506
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G L V NL P VTN+ + + FS+ G ++R + D GRP+ + F
Sbjct: 160 GAALTVRNLLPTVTNELLEQAFSQFGPVERAIVVTDDRGRPTGKGIVEFGN 210
>gi|212275065|ref|NP_001130367.1| uncharacterized protein LOC100191462 [Zea mays]
gi|194688948|gb|ACF78558.1| unknown [Zea mays]
Length = 424
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRP 138
K++V N+H V D + E F++ GE++ + FDKN GRP
Sbjct: 133 KIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRP 172
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSVSSVACFAT 148
G+KL+V L G T+D+I+E FS GE+ I D++ GR FAT
Sbjct: 41 GSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFAT 92
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
T LY+ NL P VT + +RE F E G++ I D+NG
Sbjct: 191 TNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENG 228
>gi|189241005|ref|XP_969371.2| PREDICTED: similar to CG6961 CG6961-PA [Tribolium castaneum]
Length = 404
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
+ G ++ VSNL VT DD++ELF +IG+L
Sbjct: 280 VPAGHRIVVSNLQSTVTQDDVKELFEDIGQL 310
>gi|157120370|ref|XP_001653630.1| hypothetical protein AaeL_AAEL008938 [Aedes aegypti]
gi|108875011|gb|EAT39236.1| AAEL008938-PA [Aedes aegypti]
Length = 441
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNLH VT +DI+ELF +IG+L
Sbjct: 315 GYRIVVSNLHGSVTQNDIKELFEDIGDL 342
>gi|270012978|gb|EFA09426.1| hypothetical protein TcasGA2_TC010637 [Tribolium castaneum]
Length = 401
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
+ G ++ VSNL VT DD++ELF +IG+L
Sbjct: 277 VPAGHRIVVSNLQSTVTQDDVKELFEDIGQL 307
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSVSSVACFAT 148
G+KL+V L G T+D+I+E FS GE+ I D++ GR FAT
Sbjct: 41 GSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFAT 92
>gi|341878801|gb|EGT34736.1| hypothetical protein CAEBREN_07749 [Caenorhabditis brenneri]
Length = 200
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
++ +SNL P VT +D+RELF+E +K ++HFD N
Sbjct: 70 VRINLSNLAPTVTREDLRELFNEYS-IKNVSVHFDLN 105
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ NL +++ +++LFSE G + + D NGR S F+T
Sbjct: 317 GANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFST 367
>gi|126631869|gb|AAI34025.1| Pspc1 protein [Danio rerio]
Length = 356
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G L V NL P V+N+ + + FS+ G ++R + D GRP+ + FA
Sbjct: 149 GAALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFAN 199
>gi|449438721|ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
gi|449476391|ref|XP_004154724.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
Length = 251
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R R F D FE +L+ + T +YV N+ T + + ELFS GE+K+
Sbjct: 12 SIYRDRRFHGSQDEFEVALQTS--------TTVYVGNMSFYTTEEQVYELFSRAGEIKKI 63
Query: 129 AIHFDKNGRPSVSSVACFATF 149
+ DKN + CF +
Sbjct: 64 IMGLDKNSKTPCG--FCFVLY 82
>gi|195448827|ref|XP_002071831.1| GK24943 [Drosophila willistoni]
gi|194167916|gb|EDW82817.1| GK24943 [Drosophila willistoni]
Length = 449
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
SL AG + + G ++ VSNLH VT DIRELF++IG + Y H + G V
Sbjct: 327 SLPGAGANN-KSGYRVLVSNLHANVTTGDIRELFNDIGPM--YDAHVVRPGTAEV 378
>gi|19112507|ref|NP_595715.1| RNA binding protein Mlo3 [Schizosaccharomyces pombe 972h-]
gi|2498564|sp|Q09330.1|MLO3_SCHPO RecName: Full=mRNA export protein mlo3; AltName: Full=RNA-annealing
protein mlo3
gi|1597736|gb|AAB41270.1| ORF [Schizosaccharomyces pombe]
gi|2326859|emb|CAB10980.1| RNA binding protein Mlo3 [Schizosaccharomyces pombe]
Length = 199
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 53/138 (38%), Gaps = 45/138 (32%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLD II S+ K G R+ R R P P NA+
Sbjct: 1 MSMELDQSLDAIIASKPK-------GGIRKRRARSNKPK---------------PTKNAK 38
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
P+ T + A S I +K+ VSNL VT ++ELF
Sbjct: 39 PAVNTAS----------------------ALKSVISEESKIIVSNLPTDVTEAQVKELFV 76
Query: 120 SEIGELKRYAIHFDKNGR 137
IG KR ++ + NGR
Sbjct: 77 KSIGPCKRVSLAYGPNGR 94
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+LYV NLHP +T D++R++F G ++ + D++G
Sbjct: 282 RLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESG 318
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G LYV N+ +T+D +RE F+ G + + D+NGR CF
Sbjct: 340 GVNLYVKNIEEEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCF 388
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 52 RRGPLSNARPSSYTIAK-SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
R GP SN PS+ + K S++ + +HD T ++V NL P V
Sbjct: 227 RIGPASNKNPSTQSQPKASYQNPQGAQNEHD--------------PNNTTIFVGNLDPNV 272
Query: 111 TNDDIRELFSEIGELKRYAI 130
T+D +R++F GEL I
Sbjct: 273 TDDHLRQVFGHYGELVHVKI 292
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
GT LY+ NL V ++ ++ELFSE G + + D G S F T
Sbjct: 295 GTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLT 345
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 85 DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVA 144
D RA I G E K++V L P +T + +RE F GE++ +I + + +
Sbjct: 101 DPKRAKAIKGKEPPKKVFVGGLSPDITEEQLREYFGVYGEIE--SIELPTDTKTNERRGF 158
Query: 145 CFATFS 150
CF TF+
Sbjct: 159 CFVTFA 164
>gi|413923014|gb|AFW62946.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 92
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + +E +L A+ T LY+ N+ T + ELFS GE+K+ +
Sbjct: 15 RDRRFKGTQEEYEAALLAS--------TTLYIGNMSFYTTEEQAYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATFSPL 152
DKN + CF PL
Sbjct: 67 LDKNSKTPCG--FCFVLCGPL 85
>gi|201065923|gb|ACH92371.1| FI06768p [Drosophila melanogaster]
Length = 235
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 42/145 (28%)
Query: 1 MATHVDMSLDDIIKSR------KKSERERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ + MSLDDIIK + ++ ER QG R R G RG S +G TG
Sbjct: 16 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 72
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ T+ K ++ T + V NL GV
Sbjct: 73 RKSKFKQE-----TLLKPPKKP-------------------------TLVMVCNLDYGVD 102
Query: 112 NDDIRELFSEIGELKRYAIHFDKNG 136
+DDI ELF++ G +++ +H+D++G
Sbjct: 103 DDDIMELFNQDGVVEKGFVHYDRDG 127
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ NL +++ +++LFSE G + + D NGR S F+T
Sbjct: 317 GANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFST 367
>gi|255560345|ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
gi|223539602|gb|EEF41188.1| RNA binding protein, putative [Ricinus communis]
Length = 437
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+++Y+SNL P VT D++RELF IG++ R
Sbjct: 299 SRIYISNLPPDVTTDELRELFGGIGQVGR 327
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRP 138
+ TK+YV NL T D+RELFS+ G + ++ D++ GRP
Sbjct: 1 MNTKMYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRP 43
>gi|24583933|ref|NP_609574.1| RNA and export factor binding protein 2, isoform A [Drosophila
melanogaster]
gi|386769548|ref|NP_001246007.1| RNA and export factor binding protein 2, isoform B [Drosophila
melanogaster]
gi|386769550|ref|NP_001246008.1| RNA and export factor binding protein 2, isoform C [Drosophila
melanogaster]
gi|7297959|gb|AAF53203.1| RNA and export factor binding protein 2, isoform A [Drosophila
melanogaster]
gi|383291465|gb|AFH03681.1| RNA and export factor binding protein 2, isoform B [Drosophila
melanogaster]
gi|383291466|gb|AFH03682.1| RNA and export factor binding protein 2, isoform C [Drosophila
melanogaster]
Length = 220
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 42/145 (28%)
Query: 1 MATHVDMSLDDIIKSR------KKSERERGQG---RARRGRGRGRGPSGSVSGGRMTGAA 51
M+ + MSLDDIIK + ++ ER QG R R G RG S +G TG
Sbjct: 1 MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRSRNG---TGFI 57
Query: 52 RRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVT 111
R+ T+ K ++ T + V NL GV
Sbjct: 58 RKSKFKQE-----TLLKPPKKP-------------------------TLVMVCNLDYGVD 87
Query: 112 NDDIRELFSEIGELKRYAIHFDKNG 136
+DDI ELF++ G +++ +H+D++G
Sbjct: 88 DDDIMELFNQDGVVEKGFVHYDRDG 112
>gi|322707020|gb|EFY98599.1| RNA binding domain-containing protein [Metarhizium anisopliae ARSEF
23]
Length = 339
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
G+K+ V N+H +T +D+ ELF+ IG + + + +D+ GR
Sbjct: 118 GSKIRVENIHYDLTEEDLDELFARIGRVSKLNLRYDRAGR 157
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 29 RRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP---SSYTIAKSFRRTRNFPWQHDLFED 85
R G G+ +G G V+ AAR N + + + K+ +++ FE
Sbjct: 251 RDGEGKSKG-FGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQ 309
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVAC 145
SL+ A + G+ LYV NL VT+D +RE F+ G + + D G S
Sbjct: 310 SLKEA--ADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPTGVSRGSGFVA 367
Query: 146 FAT 148
F+T
Sbjct: 368 FST 370
>gi|49900638|gb|AAH76169.1| Pspc1 protein [Danio rerio]
Length = 300
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G L V NL P V+N+ + + FS+ G ++R + D GRP+ + FA
Sbjct: 149 GAALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFAN 199
>gi|223948117|gb|ACN28142.1| unknown [Zea mays]
gi|414585220|tpg|DAA35791.1| TPA: hypothetical protein ZEAMMB73_646207 [Zea mays]
gi|414585221|tpg|DAA35792.1| TPA: hypothetical protein ZEAMMB73_646207 [Zea mays]
Length = 521
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRP 138
K++V N+H V D + E F++ GE++ + FDKN GRP
Sbjct: 230 KIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGRP 269
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 85 DSLR-AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
DSL G+S G +LYV +LH +T DIR++F GEL+ +H D
Sbjct: 343 DSLHLPPGVSSHHGGMQLYVGSLHFNLTESDIRQVFEPFGELEFVDLHRD 392
>gi|344299844|gb|EGW30197.1| hypothetical protein SPAPADRAFT_63810 [Spathaspora passalidarum
NRRL Y-27907]
Length = 433
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSVS 141
F D + A G E +YVSNL NDD+ ELF +G + I D GRPS +
Sbjct: 339 FTDGVTAGG----ERSDTIYVSNLPFATQNDDLFELFETVGRTTKAEIILDPITGRPSGN 394
Query: 142 SVACF 146
+V F
Sbjct: 395 AVVQF 399
>gi|71745456|ref|XP_827358.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|4104919|gb|AAD13337.1| poly(A) binding protein I [Trypanosoma brucei]
gi|70831523|gb|EAN77028.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261331563|emb|CBH14557.1| PABP2 [Trypanosoma brucei gambiense DAL972]
Length = 555
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
T LYV NL P V ++ ++E+FS GE+ + D GRP+V
Sbjct: 184 TNLYVKNLDPSVDDEKLKEVFSPFGEVTSAKVR-DLAGRPTV 224
>gi|301617153|ref|XP_002938004.1| PREDICTED: paraspeckle component 1-like [Xenopus (Silurana)
tropicalis]
Length = 517
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
G L V NL P V+N+ + E FS G ++R + D GRP+ FA
Sbjct: 149 GAALTVKNLAPVVSNELLEEAFSMFGPVERAVVIVDDRGRPTGKGFVEFA 198
>gi|398405202|ref|XP_003854067.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
gi|339473950|gb|EGP89043.1| hypothetical protein MYCGRDRAFT_92083 [Zymoseptoria tritici IPO323]
Length = 416
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 71 RRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI 130
R R+ P + D + + R A +G G+K+ V N+H +T +D+RELF IG + +
Sbjct: 147 RSQRHAPVEDDRY--APRGAATTG---GSKIRVDNIHYELTENDLRELFERIGPVASVRL 201
Query: 131 HFDKNGRPSVSSVACF 146
+D+ R ++ +
Sbjct: 202 LYDRADRSQGTAFVIY 217
>gi|308477155|ref|XP_003100792.1| hypothetical protein CRE_15496 [Caenorhabditis remanei]
gi|308264604|gb|EFP08557.1| hypothetical protein CRE_15496 [Caenorhabditis remanei]
Length = 318
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 45/144 (31%)
Query: 2 ATHVDMSLDDIIKSRKKSER---ERGQGRARRGRGRGRGP---SGSVSGGRMTGAARRGP 55
A +VDMSLDDII +K+ ++ G ARRG GR G SG SGG
Sbjct: 81 ANNVDMSLDDIISKTRKTNNSIHKKPLGGARRGTGRPTGLPRRSGGSSGG---------- 130
Query: 56 LSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTN 112
W+ DL D++ GI+ +K+ +SNL P V +
Sbjct: 131 ----------------------WR-DL--DAVSNHGITSRGNDSKVIRVNISNLAPTVIS 165
Query: 113 DDIRELFSEIGELKRYAIHFDKNG 136
D+ ELF + +L +++F+++G
Sbjct: 166 SDLEELFGDY-KLHSVSVNFNEHG 188
>gi|45198667|ref|NP_985696.1| AFR149Cp [Ashbya gossypii ATCC 10895]
gi|44984677|gb|AAS53520.1| AFR149Cp [Ashbya gossypii ATCC 10895]
gi|374108926|gb|AEY97832.1| FAFR149Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 34/149 (22%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ ++D +LD+II S+KK R R + R + SV+ GR RRGP + R
Sbjct: 1 MSANLDKALDEIIDSQKKPVR-------RPNKNAPRKVAKSVTAGR-----RRGPAAGVR 48
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
++ P + RA + TK+ V L + D +R+ F
Sbjct: 49 -------------KSVPVE--------RATSMLEAAYATKVNVEGLPRDIKEDAVRDFFR 87
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
S +G L+R + +++ G + + FA
Sbjct: 88 SSVGGLQRVLLSYNERGNSTGMATLTFAN 116
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
T LY+ NL P VT + +RE F E G++ I D+NG
Sbjct: 211 TNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENG 248
>gi|449298181|gb|EMC94198.1| hypothetical protein BAUCODRAFT_74746 [Baudoinia compniacensis UAMH
10762]
Length = 178
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 60 RPSSYTIAKSFRRTR---------NFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
+PS+Y ++K +R R N P DL E+ L +A T LYV NL
Sbjct: 10 KPSTYAMSKYKKRRRGPNDDGTGTNRPPSPDL-EEKLSSA--------TTLYVGNLSFYT 60
Query: 111 TNDDIRELFSEIGELKRYAIHFDK 134
T + I LFS+ GE+KR + D+
Sbjct: 61 TEEQIHALFSKCGEIKRLVMGLDR 84
>gi|401885117|gb|EJT49245.1| hypothetical protein A1Q1_01645 [Trichosporon asahii var. asahii
CBS 2479]
Length = 333
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
R P +R ++ KS + + +RA + E K++V L P VT+
Sbjct: 22 RDPTGRSRGFAFLTFKSVSSVEAVLAKDHQLDGKMRAIPRAEHERTAKVFVGGLAPSVTS 81
Query: 113 DDIRELFSEIGELKRYAIHFDK-NGRPSVSSVACFATFS 150
D +++ S+ G++ + FD+ NGR S FATF+
Sbjct: 82 DSLKQFLSQYGKVMDATVMFDRLNGR---SKGFAFATFA 117
>gi|293332553|ref|NP_001169063.1| uncharacterized protein LOC100382904 [Zea mays]
gi|223974745|gb|ACN31560.1| unknown [Zea mays]
Length = 426
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LF+ IG+++R I ++ NGR + V F
Sbjct: 318 SGGDKSAVIYVRNLPWSTCNEDLVDLFTTIGKVERAEIQYEGNGRSRGTGVVEF 371
>gi|302404281|ref|XP_002999978.1| RNP domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261361160|gb|EEY23588.1| RNP domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 572
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 464 AGTDKSEVIYVRNLPWSTSNEDLVELFTTIGKVEKAEIQYEPSGRSRDTGVVQF 517
>gi|242790897|ref|XP_002481649.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218718237|gb|EED17657.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 478
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LF+ IG+++R I ++ NGR + V F
Sbjct: 370 SGGDKSAVIYVRNLPWSTCNEDLVDLFTTIGKVERAEIQYEGNGRSRGTGVVEF 423
>gi|50426851|ref|XP_462023.1| DEHA2G11044p [Debaryomyces hansenii CBS767]
gi|49657693|emb|CAG90505.1| DEHA2G11044p [Debaryomyces hansenii CBS767]
Length = 457
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 96 EVGTKLYVSNLHPGVTN-DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
E ++VSNL P VTN DD+ ELF IG + + +++ G+PS ++V F
Sbjct: 376 EKSNTIFVSNL-PWVTNVDDLYELFETIGRVANAEVQYNEAGKPSGNAVIQF 426
>gi|50555463|ref|XP_505140.1| YALI0F07909p [Yarrowia lipolytica]
gi|49651010|emb|CAG77947.1| YALI0F07909p [Yarrowia lipolytica CLIB122]
Length = 221
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFA 147
T L + NLH +T +D+ +LF+++G + IH+D++GR + F+
Sbjct: 66 NTVLLIRNLHYELTENDLYDLFNKVGRVDDVEIHYDRSGRSLGDANVVFS 115
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
GT LY+ NL V ++++ ELFSE G + + D NG +S + F +FS
Sbjct: 305 GTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNG---ISRGSGFVSFS 354
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+ LYV NL P ++++ ++E+FS G + + D NG S FAT
Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFAT 367
>gi|212534696|ref|XP_002147504.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210069903|gb|EEA23993.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 434
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG + +YV NL N+D+ +LF+ IG+++R I ++ NGR + V F
Sbjct: 326 SGGDKSAVIYVRNLPWSTCNEDLVDLFTTIGKVERAEIQYEGNGRSRGTGVVEF 379
>gi|452843109|gb|EME45044.1| hypothetical protein DOTSEDRAFT_70923 [Dothistroma septosporum
NZE10]
Length = 187
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 60 RPSSYTIAKS--FRRTRNFPWQHDLFEDSLRAAGISGIEV------GTKLYVSNLHPGVT 111
+PSSYTI K+ +R R P D ED R + ++ T LYV NL T
Sbjct: 15 KPSSYTIGKNKKQKRGRGNP-NDDSTEDRDRDRSDNQPDIEDKLKHATTLYVGNLSFYTT 73
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEEVM 167
+ I LFS GE+KR + D+ S C F +++Y E+ +
Sbjct: 74 EEQIHTLFSSCGEIKRLVMGLDR-----FSKTPCGFCF--------VEYYTHEDAL 116
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
GT LY+ NL V ++++RELFSE G + + D +G +S + F FS
Sbjct: 305 GTNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDPSG---ISRGSGFVAFS 354
>gi|307106138|gb|EFN54385.1| hypothetical protein CHLNCDRAFT_14225, partial [Chlorella
variabilis]
Length = 148
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 67 AKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELK 126
A S + R F FE+ L + T +YV NL T D I E+FS++G++K
Sbjct: 11 AISQYKDRRFCGTQQEFEECLHTS--------TTVYVGNLSFFTTEDQIFEVFSKVGDVK 62
Query: 127 RYAIHFDKNGRPSVSSVACFATF 149
R + DK+ S CF +
Sbjct: 63 RIVMGLDKH--RSTPCGFCFVVY 83
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
GT LY+ NL V ++ ++ELFSE G + + D G S F T
Sbjct: 755 GTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLT 805
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ N+ G+ ++ +++LF E G++ + D GR S FAT
Sbjct: 278 GINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFAT 328
>gi|225684043|gb|EEH22327.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb03]
Length = 314
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
SG E ++V NL N+D+ +LFS IG+++R I ++ NGR + V F
Sbjct: 207 SGGERSAIIFVRNLPWSTCNEDLVDLFSTIGKVERAEIQYEPNGRSRGTGVVEF 260
>gi|154335501|ref|XP_001563989.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061020|emb|CAM38039.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 427
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 77 PWQHDLFEDSLRAAGIS-------GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYA 129
P Q + ++ AAG + I VG+KL+V + T D +R LF++ G L
Sbjct: 153 PTQMLTPQTNVAAAGAAVWTSAAANINVGSKLFVGQVPAVCTEDQLRPLFAQFGSLLEIK 212
Query: 130 IHFDKNGR 137
I + NGR
Sbjct: 213 IMREPNGR 220
>gi|449489183|ref|XP_004176732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Taeniopygia
guttata]
Length = 272
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G + E L+V NL P VT + I ELF + G + I D++GRP + F
Sbjct: 2 GAAAAEANRTLFVGNLDPKVTEELIFELFHQAGPVITVKIPKDRDGRPKQFAFVNF 57
>gi|350537317|ref|NP_001232044.1| nuclear cap-binding protein subunit 2 [Taeniopygia guttata]
gi|259511696|sp|B5G279.1|NCBP2_TAEGU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|197128892|gb|ACH45390.1| putative nuclear cap binding protein subunit 2 variant 1
[Taeniopygia guttata]
Length = 168
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
LS SY +R ++F L E SL+ + + LYV NL T +
Sbjct: 8 TLSGLNSDSYCEISQYR-DQHFRGSRQLQEKSLK--------ISSTLYVGNLSFYTTEEQ 58
Query: 115 IRELFSEIGELKRYAIHFDK 134
I+ELFS+ G++KR + DK
Sbjct: 59 IQELFSKCGDVKRIVMGLDK 78
>gi|443895426|dbj|GAC72772.1| uncharacterized protein PANT_7d00265 [Pseudozyma antarctica T-34]
Length = 265
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 78 WQHDLFEDSLRAAG------------------ISGIEVGTKLYVSNLHPGVTNDDIRELF 119
W+HD ++++ A G + ++ KL++ NL V+ D++ LF
Sbjct: 41 WKHDRYDENASARGPRRAGSGRPLSFPRDPAETNEVKATGKLFIENLQWDVSEQDLKTLF 100
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACF 146
+IG + + I +D++ R + +V +
Sbjct: 101 EQIGPVAKAYIKYDRSDRSTGRAVVVY 127
>gi|448537900|ref|XP_003871410.1| Gbp2 single-strand telomeric DNA-binding protein [Candida
orthopsilosis Co 90-125]
gi|380355767|emb|CCG25285.1| Gbp2 single-strand telomeric DNA-binding protein [Candida
orthopsilosis]
Length = 452
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G E ++V NL NDD+ +LF IG + + I + ++GR S ++V F
Sbjct: 370 GEEPNDTIFVENLPFSTQNDDLFDLFETIGRVTKAEIQYQEDGRASGNAVVQF 422
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+ LYV NL P ++++ ++E+FS G + + D NG S F+T
Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFST 367
>gi|440640342|gb|ELR10261.1| hypothetical protein GMDG_04647 [Geomyces destructans 20631-21]
Length = 584
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 23/95 (24%)
Query: 54 GPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTND 113
GP S A P+ +T AG E+ +YV NL +N+
Sbjct: 461 GPASTAPPNPFT--------------------DFATAGTDRNEI---IYVRNLPWSTSNE 497
Query: 114 DIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
D+ ELF+ IG++++ I ++ NGR + V F T
Sbjct: 498 DLVELFTTIGKVEQAEIQYEPNGRSRGTGVVRFDT 532
>gi|393233178|gb|EJD40752.1| hypothetical protein AURDEDRAFT_127483 [Auricularia delicata
TFB-10046 SS5]
Length = 878
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRPSVSSVACF 146
A + +VGT ++V N+ T+DD+R LF G L+ + D + GR + ACF
Sbjct: 393 AQLPQTDVGTTVFVRNVPYDATDDDLRTLFRAFGPLRYARVTMDHDSGRSRGTGFACF 450
>gi|341878817|gb|EGT34752.1| hypothetical protein CAEBREN_05318 [Caenorhabditis brenneri]
Length = 203
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRP 138
++ +SNL P VT +D+RELF+E +K +++FD N P
Sbjct: 70 VRINLSNLAPTVTREDLRELFNEYS-IKNVSVNFDANRDP 108
>gi|367032346|ref|XP_003665456.1| hypothetical protein MYCTH_2309198 [Myceliophthora thermophila ATCC
42464]
gi|347012727|gb|AEO60211.1| hypothetical protein MYCTH_2309198 [Myceliophthora thermophila ATCC
42464]
Length = 382
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G E ++V NL +NDD+ ELFS IG++++ I ++ +GR S V F
Sbjct: 277 GGEKSDTIHVRNLPWSTSNDDLVELFSTIGKVEQAEIQYEPSGRSRGSGVVRF 329
>gi|410906061|ref|XP_003966510.1| PREDICTED: paraspeckle component 1-like [Takifugu rubripes]
Length = 449
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G L V NL P VTN+ + + FS+ G ++R + D G P+ + FA
Sbjct: 93 GAALTVRNLLPAVTNELLEQAFSQFGPVERAIVVTDDQGCPTGKGIVEFAN 143
>gi|385281386|gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
Length = 352
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LY+ NL + +D +RELFSE G + + D NG VS + F F
Sbjct: 149 GANLYLKNLDDSIGDDKLRELFSEFGSITSCKVMRDPNG---VSRGSGFVAFQ 198
>gi|171909603|ref|ZP_02925073.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 100
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
+ TK+YV NL T DD+R LFS GE++ + D+ +GRP
Sbjct: 1 MNTKMYVGNLPWTATEDDVRSLFSAHGEVREVNMPTDRTSGRP 43
>gi|380013845|ref|XP_003690956.1| PREDICTED: uncharacterized protein LOC100869814 [Apis florea]
Length = 428
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 314 TGYRIVVSNLQANVTQEDIKELFEDVGEL 342
>gi|332027294|gb|EGI67378.1| Polymerase delta-interacting protein 3 [Acromyrmex echinatior]
Length = 446
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 332 GYRIVVSNLQANVTQEDIKELFEDVGEL 359
>gi|116791485|gb|ABK25999.1| unknown [Picea sitchensis]
Length = 235
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + FE +LR + +YV NL T + + ELFS GE+K+ +
Sbjct: 15 RDRRFNGTQEEFEHALRTS--------ITVYVGNLSFYTTEEQVYELFSRAGEVKKLIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF F
Sbjct: 67 LDKNTKTPCG--FCFVLF 82
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
G+S G +LYV +LH +T DI+++F GEL+ +H D
Sbjct: 110 GVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRD 152
>gi|328790685|ref|XP_392259.4| PREDICTED: hypothetical protein LOC408724 [Apis mellifera]
Length = 427
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 313 TGYRIVVSNLQANVTQEDIKELFEDVGEL 341
>gi|406694599|gb|EKC97923.1| subunit of cleavage factor I, Hrp1p [Trichosporon asahii var.
asahii CBS 8904]
Length = 466
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 53 RGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
R P +R ++ KS + + +RA + E K++V L P VT+
Sbjct: 155 RDPTGRSRGFAFLTFKSVSSVEAVLAKDHQLDGKMRAIPRAEHERTAKVFVGGLAPSVTS 214
Query: 113 DDIRELFSEIGELKRYAIHFDK-NGRPSVSSVACFATFS 150
D +++ S+ G++ + FD+ NGR S FATF+
Sbjct: 215 DSLKQFLSQYGKVMDATVMFDRLNGR---SKGFAFATFA 250
>gi|213409309|ref|XP_002175425.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212003472|gb|EEB09132.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 227
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 78 WQHDLFEDSL--RAAGISGI--EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
W+HDL +D + R I + + + + V N+H V+ ++++ +F + +K ++ FD
Sbjct: 54 WEHDLSQDRIESRPRRIERVKRDATSLVSVDNIHYEVSEEELKTVFDRVAPVKNVSMKFD 113
Query: 134 KNGRPSVSSVACFATFSPLFLWV-QLKWYMPEEV-MHLQLLS 173
+ GR F L V +L +M + +H++LL+
Sbjct: 114 RAGRSEGRCTIAFEKEEDAKLAVAELNGFMLRDRGLHVELLA 155
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
G+S G +LYV +LH +T DI+++F GEL+ +H D
Sbjct: 365 GVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRD 407
>gi|133901844|ref|NP_001076697.1| Protein ALY-3, isoform a [Caenorhabditis elegans]
gi|3878709|emb|CAA92829.1| Protein ALY-3, isoform a [Caenorhabditis elegans]
Length = 240
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 34/138 (24%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
AT+VD+SL+DII +K+ +GS+ + G ARRG N RP
Sbjct: 4 ATNVDLSLEDIISKTRKT-------------------TGSIQK-KSFGGARRG---NTRP 40
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY---VSNLHPGVTNDDIREL 118
+ RR+ DL D+++ GIS +K+ +SNL P V + D+ EL
Sbjct: 41 TGLP-----RRSGGSGGWKDL--DAVQNHGISSRGNDSKVIRVNISNLAPTVISSDLEEL 93
Query: 119 FSEIGELKRYAIHFDKNG 136
F + L +++F+++G
Sbjct: 94 FGDY-RLSSVSVNFNEHG 110
>gi|389747840|gb|EIM89018.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 540
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF- 149
G +G G +LYV NL D+++LF E G + R I+ +GRP S + T
Sbjct: 256 GGAGHNPGNQLYVGNLPYQAGWQDLKDLFREAGNIVRADINIGADGRPKGSGTVIYETAK 315
Query: 150 ---SPLFLWVQLKWY 161
S + ++ WY
Sbjct: 316 DAQSAINMFNGHNWY 330
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
G+S G +LYV +LH +T DI+++F GEL+ +H D
Sbjct: 389 GVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRD 431
>gi|350401581|ref|XP_003486197.1| PREDICTED: hypothetical protein LOC100746290 [Bombus impatiens]
Length = 427
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 314 GYRIVVSNLQANVTQEDIKELFEDVGEL 341
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
T +YV N+ P VT++D R+LF + G++ ++ D+ G+ F T F V+
Sbjct: 240 TNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQEGKTRGFGFVNFTTHEAAFKAVE 298
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D+NGR
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGR 315
>gi|225447559|ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
Length = 462
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+++Y+SNL P VT D++RELF IG++ R
Sbjct: 321 SRIYISNLPPDVTVDELRELFGGIGQVGR 349
>gi|440476103|gb|ELQ44736.1| hypothetical protein OOU_Y34scaffold00058g9 [Magnaporthe oryzae
Y34]
gi|440481100|gb|ELQ61720.1| hypothetical protein OOW_P131scaffold01159g26 [Magnaporthe oryzae
P131]
Length = 328
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQ 157
GTK+ V N+H +T +D++ LFS IG + + +D++GR + + + L V+
Sbjct: 98 GTKIRVENIHYELTEEDLQGLFSRIGPIISLELLYDRSGRSEGVAYVTYESHKDATLAVK 157
>gi|346975651|gb|EGY19103.1| RNP domain-containing protein [Verticillium dahliae VdLs.17]
Length = 458
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 350 AGTDKSEVIYVRNLPWSTSNEDLVELFTTIGKVEKAEIQYEPSGRSRGTGVVQF 403
>gi|268535748|ref|XP_002633009.1| Hypothetical protein CBG21776 [Caenorhabditis briggsae]
Length = 227
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 2 ATHVDMSLDDIIKSRKKSER---ERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSN 58
AT +DM+L DII S+KKS + +R +A G + RGPS + + R +G A RG +
Sbjct: 4 ATSIDMALSDIISSKKKSTKKGVKRPIKKAAAGGVKKRGPSAASTPRRQSGGAGRGGI-- 61
Query: 59 ARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIREL 118
S+ G S ++ +SNL P V + D+R+L
Sbjct: 62 -------------------------RKSVGGRGDSNDNREVRVNLSNLAPSVLSGDLRQL 96
Query: 119 FSEIGELKRYAIHFDKNG 136
F+E ++K +++F++ G
Sbjct: 97 FAEF-KIKNCSVNFNEKG 113
>gi|414884784|tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
KLYV N+ VTND++R++F+ G ++R + +DK
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDK 104
>gi|340729134|ref|XP_003402863.1| PREDICTED: hypothetical protein LOC100649607 [Bombus terrestris]
Length = 432
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 319 GYRIVVSNLQANVTQEDIKELFEDVGEL 346
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D+NGR
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGR 315
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D+NGR
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGR 315
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYV N+H +T DD+ +F GEL+ + D+ GR + FA
Sbjct: 266 RLYVGNVHFSITEDDLTNVFEPFGELEFVQLQKDETGRSKGYAFVQFAN 314
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D+NGR
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGR 315
>gi|307211553|gb|EFN87631.1| Polymerase delta-interacting protein 3 [Harpegnathos saltator]
Length = 433
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 320 GYRIVVSNLQANVTQEDIKELFEDVGEL 347
>gi|255577432|ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
gi|223530928|gb|EEF32787.1| RNA binding motif protein, putative [Ricinus communis]
Length = 217
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKW 160
+YVSNL +TN D+ LFS G++ R + DK R S F F V
Sbjct: 53 VYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDKQSRQSKG--VAFIQFVSRDDAVSAAK 110
Query: 161 YMPEEVMHLQLLSDTI 176
M +++++ + LS +I
Sbjct: 111 QMDKKILNGRTLSASI 126
>gi|336464808|gb|EGO53048.1| hypothetical protein NEUTE1DRAFT_73283 [Neurospora tetrasperma FGSC
2508]
Length = 827
Score = 37.7 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+ IS IE ++L++ NL VT DD+RE F++ G L+ + D G
Sbjct: 299 SAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEVHVPLDSKG 345
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 278 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGR 315
>gi|409048188|gb|EKM57666.1| hypothetical protein PHACADRAFT_251433 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF--- 149
+G G +LYV NL D+++LF G + R I+ +GRP S F T
Sbjct: 270 AGTNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGADGRPKGSGTVIFETAKDA 329
Query: 150 -SPLFLWVQLKWY 161
+ ++ +WY
Sbjct: 330 QQAIGMYNGFEWY 342
>gi|307180222|gb|EFN68255.1| Polymerase delta-interacting protein 3 [Camponotus floridanus]
Length = 419
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 306 GYRIVVSNLQANVTQEDIKELFEDVGEL 333
>gi|154315645|ref|XP_001557145.1| nuclear cap binding protein subunit 2 [Botryotinia fuckeliana
B05.10]
gi|347840058|emb|CCD54630.1| similar to nuclear cap binding protein subunit 2 [Botryotinia
fuckeliana]
Length = 181
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 47 MTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNL 106
M G+ R +PS+Y ++ +R + + + E + ++ T LYV NL
Sbjct: 1 MPGSIRNTVDRLDKPSAYYQGRNKKRRYDRDGEDERRERTPEEPADDPLKDATTLYVGNL 60
Query: 107 HPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
T + I ELF++ GE+KR + D+ + CF +
Sbjct: 61 SFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPCG--FCFVEY 101
>gi|302811225|ref|XP_002987302.1| hypothetical protein SELMODRAFT_125790 [Selaginella moellendorffii]
gi|300144937|gb|EFJ11617.1| hypothetical protein SELMODRAFT_125790 [Selaginella moellendorffii]
Length = 159
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ +YV NL T + + ELFS GE+KR + DKN + CF F
Sbjct: 29 ALQTSVTVYVGNLSFYTTEEQLYELFSRCGEIKRIVMGLDKNNKTPCG--FCFIIF 82
>gi|312073325|ref|XP_003139470.1| RNA and export factor binding protein 2 [Loa loa]
gi|307765372|gb|EFO24606.1| RNA and export factor binding protein 2 [Loa loa]
Length = 215
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+ +SNL P VT D++ELF+E + A+ ++ +G PS ++V F F
Sbjct: 68 VNISNLGPMVTTTDLQELFAE-HPYEDVAVQYEPDGNPSGTAVVIFKRF 115
>gi|302814995|ref|XP_002989180.1| hypothetical protein SELMODRAFT_129288 [Selaginella moellendorffii]
gi|300143080|gb|EFJ09774.1| hypothetical protein SELMODRAFT_129288 [Selaginella moellendorffii]
Length = 159
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ +YV NL T + + ELFS GE+KR + DKN + CF F
Sbjct: 29 ALQTSVTVYVGNLSFYTTEEQLYELFSRCGEIKRIVMGLDKNNKTPCG--FCFIIF 82
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 94 GIEVGTK-LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
G EV K LYV L ++ D +RE+FS+ GE+ I FDKN
Sbjct: 96 GREVSNKILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKN 138
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 274 RLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGR 311
>gi|407921598|gb|EKG14739.1| hypothetical protein MPH_08014 [Macrophomina phaseolina MS6]
Length = 173
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 60 RPSSYTIAKSFRRTR-NFPWQHDL------FEDSLRAAGISGIEVGTKLYVSNLHPGVTN 112
+PSSY +K +R + H+ FE+ L+ A T LYV NL T
Sbjct: 14 KPSSYAASKQRKRKYVHVEGDHEEREKTPDFEEKLKDA--------TTLYVGNLSFYTTE 65
Query: 113 DDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+ I ELF++ GE+KR + D+ + CF +
Sbjct: 66 EQIHELFAKCGEIKRLVMGLDRYQKTPCG--FCFVEY 100
>gi|429847560|gb|ELA23152.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 1092
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 82 LFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
++ D RA G +E G +L+++ L P +DI ++FS+ G +KR I +K G+
Sbjct: 745 MYSDPSRAKKREGAVEEGRELHITGLDPAAIEEDIEKVFSKYGTVKRTNIPRNKGGK 801
>gi|383858824|ref|XP_003704899.1| PREDICTED: uncharacterized protein LOC100876206 [Megachile
rotundata]
Length = 428
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 315 GYRIVVSNLQANVTQEDIKELFEDVGEL 342
>gi|429860697|gb|ELA35423.1| nuclear cap binding protein subunit 2 [Colletotrichum
gloeosporioides Nara gc5]
Length = 174
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISG-IEVGTKLYVSNLHPGVTNDDIREL 118
RPS+Y +++ RR RN H EDS A + T LYV NL T + + EL
Sbjct: 14 RPSAYYHSRNKRR-RN---DHRDDEDSRPAEPAEDPLAHATTLYVGNLSFYTTEEQVYEL 69
Query: 119 FSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
FS+ GE+KR + D+ + CF +
Sbjct: 70 FSKCGEIKRLVMGLDRFNKTPCG--FCFVEY 98
>gi|345485252|ref|XP_003425227.1| PREDICTED: hypothetical protein LOC100115530 isoform 2 [Nasonia
vitripennis]
Length = 425
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 313 AGYRIVVSNLQANVTQEDIKELFEDVGEL 341
>gi|345485250|ref|XP_001600231.2| PREDICTED: hypothetical protein LOC100115530 isoform 1 [Nasonia
vitripennis]
Length = 442
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGEL 125
G ++ VSNL VT +DI+ELF ++GEL
Sbjct: 331 GYRIVVSNLQANVTQEDIKELFEDVGEL 358
>gi|440467309|gb|ELQ36539.1| RNP domain-containing protein [Magnaporthe oryzae Y34]
gi|440478902|gb|ELQ59700.1| RNP domain-containing protein [Magnaporthe oryzae P131]
Length = 500
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR S V F
Sbjct: 394 AGADRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGSGVVRF 447
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 35/185 (18%)
Query: 15 SRKKSERERGQGRARRGRGRGR------GPSGSVSGGRMTGAARRGPLSNARPSSYTIAK 68
S S++E G+ ++ G G S S G+A + ++ +P+ +++
Sbjct: 276 SETSSKQESGEASNKKQTASGEASKDSSGTSNEESAQNEDGSADKNVSADVQPNRLYVSR 335
Query: 69 SFRRTRN---FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
+ ++ QH+ ++S + G LYV NL + +D+R +F G +
Sbjct: 336 AQKKNERQVVLKSQHEAVKESHQRYQ------GVNLYVKNLADSINEEDLRSMFEPFGTV 389
Query: 126 KRYAIHFDKNGRPSVSSVACFATFSPLFLWVQLKWYMPEEV------MHLQLLSDTIMYC 179
+I D++G VS F +F P+E MHL+L+ +Y
Sbjct: 390 SSVSIKTDESG---VSRGFGFVSF-----------LSPDEATKAITEMHLKLVRGKPLYV 435
Query: 180 WMENR 184
+ R
Sbjct: 436 GLHER 440
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
KLYV N+ VTND++R++F+ G ++R + +DK
Sbjct: 68 KLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDK 102
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 286 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGR 323
>gi|402222407|gb|EJU02474.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 554
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYV NL D+++LF + G + R I+F +GRP S V + T
Sbjct: 274 NQLYVGNLPYQAGWQDLKDLFRQAGNIIRADINFGADGRPKGSGVVIYET 323
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPSVSSVACFATF 149
G+SG +LYV +LH +T DI+++F GEL+ +H D GR S CF +
Sbjct: 200 GVSGTHGPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGR---SKGYCFIQY 256
>gi|224035665|gb|ACN36908.1| unknown [Zea mays]
Length = 251
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
KLYV N+ VTND++R++F+ G ++R + +DK
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDK 104
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
V T +YV NL T+DD++ +F E GE+ + DK G+
Sbjct: 117 VFTNVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGK 157
>gi|242077350|ref|XP_002448611.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
gi|241939794|gb|EES12939.1| hypothetical protein SORBIDRAFT_06g030090 [Sorghum bicolor]
Length = 527
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN-GRP 138
K++V N+H V D + E F++ GE++ + FDKN G+P
Sbjct: 233 KIFVGNVHADVDVDRLYEYFAQFGEIEEGPLGFDKNTGKP 272
>gi|226533248|ref|NP_001149356.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195626620|gb|ACG35140.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414884785|tpg|DAA60799.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 251
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
KLYV N+ VTND++R++F+ G ++R + +DK
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDK 104
>gi|341878897|gb|EGT34832.1| hypothetical protein CAEBREN_30144 [Caenorhabditis brenneri]
Length = 553
Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
+++ + G+ V ++ +SNL P V DD+RELF+E ++ +++ D+NG+P+
Sbjct: 13 AIKRSKTDGLSV--QINISNLAPTVNIDDLRELFNEY-NVENVSVYSDQNGQPT 63
>gi|396474113|ref|XP_003839494.1| hypothetical protein LEMA_P031670.1 [Leptosphaeria maculans JN3]
gi|312216063|emb|CBX96015.1| hypothetical protein LEMA_P031670.1 [Leptosphaeria maculans JN3]
Length = 170
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 84 EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
ED LR A T LYV NL T + I ELFS+ GE+KR + D+
Sbjct: 43 EDKLRDA--------TTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDR 85
>gi|448115025|ref|XP_004202729.1| Piso0_001581 [Millerozyma farinosa CBS 7064]
gi|359383597|emb|CCE79513.1| Piso0_001581 [Millerozyma farinosa CBS 7064]
Length = 406
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
E ++ SNL DD+ ELF IG++ R + ++ G+PS ++V F
Sbjct: 325 ERSNTIFASNLPWATNEDDLYELFETIGKVSRAELQLNEKGKPSGNAVIQF 375
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+L+VSNL +T DD+R++F GE++ +H D +G
Sbjct: 386 RLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDPSG 422
>gi|301108451|ref|XP_002903307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097679|gb|EEY55731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 556
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++Y NLH +T DD+R +F GE+ I+ D+ GR S F++
Sbjct: 273 RIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRDEMGRSKGFSFIQFSS 321
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGR 317
>gi|425769338|gb|EKV07834.1| hypothetical protein PDIP_72120 [Penicillium digitatum Pd1]
gi|425770864|gb|EKV09324.1| hypothetical protein PDIG_62740 [Penicillium digitatum PHI26]
Length = 158
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 89 AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
A + IE G + VSN+H + +D+ ELF+E GE+K ++++ D+
Sbjct: 33 AVAVRSIE-GWIIIVSNIHEESSEEDVTELFAEYGEIKNFSLNLDR 77
>gi|298708815|emb|CBJ30774.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 604
Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 66 IAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
+AK + +N P H + ++ AG+ KL++ NLH +T DD+ E+ GE+
Sbjct: 179 LAKQEEKAKN-PTGHVILGNAAALAGL-------KLHIGNLHQNITEDDLGEICRSFGEV 230
Query: 126 KRYAIHFDKNGRPSVSSVACFA 147
+ +H D+ G + +A
Sbjct: 231 TQLILHRDEAGESKRFAFVTYA 252
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D+NGR
Sbjct: 328 RLYVGNIHFSITETDLQHVFEPFGELEFVQLQKDENGR 365
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGR 317
>gi|150951548|ref|XP_001387884.2| small subunit of the nuclear mRNA cap-binding protein complex CBC
[Scheffersomyces stipitis CBS 6054]
gi|149388685|gb|EAZ63861.2| small subunit of the nuclear mRNA cap-binding protein complex CBC,
partial [Scheffersomyces stipitis CBS 6054]
Length = 167
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
+PS Y I ++ RR +NF D + SL + + YV NL T + I ELF
Sbjct: 17 KPSQYLIKRAVRR-QNF----DNLQKSLHSKTV---------YVGNLSHFTTEEQIHELF 62
Query: 120 SEIGELKRYAIHFDKN 135
S+ G + R + D+N
Sbjct: 63 SKCGSIDRIIMGLDRN 78
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
T +YV NL P VTN++ RELF + GE+ ++ D
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRD 269
>gi|345870533|ref|ZP_08822485.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921736|gb|EGV32449.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 92
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
++YV NL VT+DD+R +FSE GEL + DK
Sbjct: 2 RIYVGNLPYSVTDDDLRTIFSEFGELAAAEVIKDK 36
>gi|389637404|ref|XP_003716339.1| RNP domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642158|gb|EHA50020.1| RNP domain-containing protein [Magnaporthe oryzae 70-15]
Length = 428
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR S V F
Sbjct: 322 AGADRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGSGVVRF 375
>gi|341904467|gb|EGT60300.1| hypothetical protein CAEBREN_11191 [Caenorhabditis brenneri]
Length = 736
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG-PLSNA 59
MA ++MSLDDIIK KK + E G + S SG + RR P NA
Sbjct: 365 MADRINMSLDDIIKRDKKVKTESKAGTSNGNNSNKNAGSNKPSGAKRNNNNRRAPPAKNA 424
Query: 60 R 60
R
Sbjct: 425 R 425
>gi|296085019|emb|CBI28434.3| unnamed protein product [Vitis vinifera]
Length = 873
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKR 127
+++Y+SNL P VT D++RELF IG++ R
Sbjct: 732 SRIYISNLPPDVTVDELRELFGGIGQVGR 760
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 74 RNFPWQHDLFEDSLRAAGISGIEVGTK------LYVSNLHPGVTNDDIRELFSEIGELKR 127
+N W+ + + G G GT+ L+V+ LH G+ +D++ +F G L
Sbjct: 329 KNIAWEAEQAAKGVTGKGKRGNGDGTQQSGPCALFVAGLHEGLAEEDVKAVFEPFGALDA 388
Query: 128 YAIHFDKNGRPSVSSVACFATFSPLFLWV 156
I D NG+ + + + +S L V
Sbjct: 389 IEISRDGNGQSNGHGIVQYREWSHAMLAV 417
>gi|342183460|emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+LR + +G LYV N P T D+ ELF E G ++ + D NG
Sbjct: 290 ALRQKYMQCQSLGNNLYVRNFDPEFTEKDLNELFKEYGVIRSCRVMTDANG 340
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ N+ G+ ++ +++LF E G++ + D GR S FAT
Sbjct: 311 GINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFAT 361
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 52 RRGPLSNARPSSYTIAK-SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGV 110
R GP SN P++ + K S++ ++ Q++ ++ T ++V NL P V
Sbjct: 233 RIGPASNKTPTTQSQPKASYQNSQPQGSQNENDPNN------------TTIFVGNLDPNV 280
Query: 111 TNDDIRELFSEIGELKRYAI 130
T+D +R++FS+ GEL I
Sbjct: 281 TDDHLRQVFSQYGELVHVKI 300
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
+YV NL VT DD+ E+F+E G +KR + D+ GRP
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRP 41
>gi|350296911|gb|EGZ77888.1| multiple RNA-binding domain-containing protein 1 [Neurospora
tetrasperma FGSC 2509]
Length = 826
Score = 37.0 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+ IS IE ++L++ NL VT DD+RE F++ G L+ + D G
Sbjct: 298 SAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGTLEEVHVPLDGKG 344
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 283 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGR 320
>gi|300087434|ref|YP_003757956.1| RNP-1 like RNA-binding protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527167|gb|ADJ25635.1| RNP-1 like RNA-binding protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 107
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
LYV NL P VT D++R LF + G++ R + D
Sbjct: 5 NLYVGNLEPSVTEDELRTLFLQFGQVTRVLVKND 38
>gi|126660168|ref|ZP_01731286.1| RNA binding protein [Cyanothece sp. CCY0110]
gi|126618533|gb|EAZ89284.1| RNA binding protein [Cyanothece sp. CCY0110]
Length = 98
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
+YV NL VT++D+ E+FSE G +KR ++ D+ GRP
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRP 41
>gi|449267909|gb|EMC78800.1| Nuclear cap-binding protein subunit 2, partial [Columba livia]
Length = 108
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
+++ + LYV NL T + I+ELFS+ G++KR + DK
Sbjct: 11 LKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDK 50
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++Y NLH +T DD+R +F GE+ I+ D+ GR S F++
Sbjct: 125 RIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRDEMGRSKGFSFIQFSS 173
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LYV NL VT++ +RELF+E G + + D +G S F+ S
Sbjct: 322 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAAS 374
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 284 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGR 321
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL + D+NGR
Sbjct: 296 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGR 333
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 37.0 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
T +YV NL P VTN++ RELF + GE+ ++ D
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRD 269
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 85 DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD--KNGRPSVSS 142
D RA G E K++V L P V D+IR+ FS+ G+++ + FD KN R
Sbjct: 134 DPKRAKARPGREPVKKIFVGGLDPEVPEDEIRQHFSKYGKVEEVELPFDRSKNQR----R 189
Query: 143 VACFATFS 150
CF +F
Sbjct: 190 FFCFVSFD 197
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 37.0 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N++P ++D+ RELF GE+ ++ D++G+
Sbjct: 240 TNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQDGK 278
>gi|310796361|gb|EFQ31822.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 441
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 334 AGTDRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 387
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
T +YV NL P VTN++ RELF + GE+ ++ D
Sbjct: 235 TNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRD 269
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D NGR
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGR 320
>gi|66801345|ref|XP_629598.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60462994|gb|EAL61190.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 687
Score = 37.0 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
KL+V L +T+DD FSE GE+ Y + +KNG CF
Sbjct: 195 KLFVGGLPKHITSDDFNNYFSEFGEISEYNLLTEKNGTIKGFGFICF 241
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL + D+NGR
Sbjct: 305 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGR 342
>gi|405970774|gb|EKC35650.1| Polymerase delta-interacting protein 3 [Crassostrea gigas]
Length = 369
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 46 RMTGAARRGPLSNARPSSY---TIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLY 102
+ + A GPL A+ + Y + S + F + ED L VG ++
Sbjct: 182 KASSAPSSGPLKLAKSAGYGPGVPSLSLDGPKVF-KSASIPEDDLLTETQLASTVGFRVI 240
Query: 103 VSNLHPGVTNDDIRELFSEIGELKR 127
VSNLH V +DI ELF IG +KR
Sbjct: 241 VSNLHTVVVQNDIIELFGAIGPIKR 265
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D NGR
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGR 320
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 37.0 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGEL 125
KLYVSNL +T DD++ELFS+ GE+
Sbjct: 783 KLYVSNLSHTMTEDDLQELFSKFGEI 808
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LYV NL + ++ +RE F + G + + D NGR CF++
Sbjct: 285 GVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSS 335
>gi|172035929|ref|YP_001802430.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354556024|ref|ZP_08975322.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171697383|gb|ACB50364.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353552023|gb|EHC21421.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 98
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
+YV NL VT++D+ E+FSE G +KR ++ D+ GRP
Sbjct: 3 IYVGNLVYDVTSEDLTEVFSEYGTVKRVSLPTDRETGRP 41
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL + D+NGR
Sbjct: 307 RLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGR 344
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D NGR
Sbjct: 283 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGR 320
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D NGR
Sbjct: 282 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGR 319
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T +DI+ +F GEL+ + D+ GR
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDETGR 306
>gi|156088367|ref|XP_001611590.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798844|gb|EDO08022.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 643
Score = 37.0 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAI-HFDKNGRPSVSSVACFATFS 150
+ GT++ + NL T + +RELFSE GE+ R I F++NG+ S CF F+
Sbjct: 474 QSGTEVCIRNLSYNTTEETMRELFSECGEVIRCVIPKFEENGK---SMGRCFIGFT 526
>gi|392562565|gb|EIW55745.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 985
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSVSSVACF 146
EVGT L+V N+ T D++R LF G L+ I D GR + ACF
Sbjct: 492 EVGTTLFVRNVPFEATEDELRTLFRAFGPLRYARITMDGPTGRSRGTGFACF 543
>gi|326924281|ref|XP_003208358.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Meleagris
gallopavo]
Length = 141
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
+++ + LYV NL T + I+ELFS+ G++KR + DK
Sbjct: 12 LKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDK 51
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T +DI+ +F GEL+ + D+ GR
Sbjct: 269 RLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDETGR 306
>gi|134075427|emb|CAK47988.1| unnamed protein product [Aspergillus niger]
Length = 336
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+LYVSNL V D+++LF ++ G + R +H D GRP S + F +
Sbjct: 224 QLYVSNLPFNVGWQDLKDLFRQAAQQGAVIRADVHTDATGRPKGSGIVAFES 275
>gi|448112471|ref|XP_004202105.1| Piso0_001581 [Millerozyma farinosa CBS 7064]
gi|359465094|emb|CCE88799.1| Piso0_001581 [Millerozyma farinosa CBS 7064]
Length = 406
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
++ SNL DD+ ELF IG++ R + ++ G+PS ++V F
Sbjct: 330 IFASNLPWATNEDDLYELFETIGKVSRAELQLNEKGKPSGNAVIQF 375
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
+LYV NL GV NDD+ +LF + GE+ AI G +V F FS
Sbjct: 4 RLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQG-----AVYAFVEFS 49
>gi|358379360|gb|EHK17040.1| hypothetical protein TRIVIDRAFT_41964 [Trichoderma virens Gv29-8]
Length = 178
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFE----DSLRAAGISGIEVGTKLYVSNLHPGVTNDDI 115
RPS+Y +++ R +++ P + D + + T LYV NL T + +
Sbjct: 14 RPSAYYLSR-VRASQSIPNKRRRDRDDNADEAAEPAVDPLANATTLYVGNLSFYTTEEQV 72
Query: 116 RELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
ELFS+ GE+KR + D+ + CF +
Sbjct: 73 YELFSKCGEIKRLIMGLDRFNKTPCG--FCFVEY 104
>gi|397626735|gb|EJK68222.1| hypothetical protein THAOC_10620 [Thalassiosira oceanica]
Length = 486
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
E K+Y+ L T D++RE F+E GE+K + +GR S +++ F+ S
Sbjct: 251 EANCKVYIRGLPWRATEDEVREFFAECGEIKSVDMPLQDDGRSSGTAIIEFSDPS 305
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D NGR
Sbjct: 285 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGR 322
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D++ +F GEL+ + D NGR
Sbjct: 285 RLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGR 322
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LYV NL + ++ +RE F + G + + D NGR CF++
Sbjct: 285 GVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSS 335
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGEL 125
++VG L++SNL P VT D I+ FS+ G+L
Sbjct: 95 LDVGADLFISNLAPDVTEDMIKTTFSQFGQL 125
>gi|168472717|gb|ACA24134.1| cap-binding protein CBP20 [Lolium temulentum]
Length = 231
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R R FP + FE +L A+ +YV N+ T + ELFS GE+K+
Sbjct: 12 SVYRDRRFPGTQEEFEAALLAS--------LTVYVGNMSFYSTEEQAYELFSRAGEIKKI 63
Query: 129 AIHFDKNGRPSVSSVACFATF 149
+ DKN R CF +
Sbjct: 64 IMGLDKNTRTPCG--FCFVLY 82
>gi|452842907|gb|EME44842.1| hypothetical protein DOTSEDRAFT_70785 [Dothistroma septosporum
NZE10]
Length = 337
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
G+ GTK+ V NLH +T +D+R+LF IG + +D+ R
Sbjct: 95 GLPGGTKIRVDNLHYELTEEDLRDLFERIGPTTSVRLLYDRADR 138
>gi|57530195|ref|NP_001006430.1| nuclear cap-binding protein subunit 2 [Gallus gallus]
gi|82233852|sp|Q5ZKR5.1|NCBP2_CHICK RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|53130698|emb|CAG31678.1| hypothetical protein RCJMB04_9i16 [Gallus gallus]
Length = 168
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
+++ + LYV NL T + I+ELFS+ G++KR + DK
Sbjct: 39 LKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDK 78
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H VT D++ +F GEL+ + D NGR
Sbjct: 285 RLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGR 322
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
+L+VSNL +T DD+R++F GE++ +H D +G
Sbjct: 359 RLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDLSG 395
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N+ P VT+++ RELF + G++ I D +G+
Sbjct: 231 TNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGK 269
>gi|340931863|gb|EGS19396.1| hypothetical protein CTHT_0048550 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 614
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+ G E ++V NL +N+D+ ELF IG++++ I ++ +GR + V F
Sbjct: 506 VPGTEKCDTIFVRNLPWSTSNEDLVELFQTIGKVEQAEIQYEPSGRSRGTGVVRF 560
>gi|403419131|emb|CCM05831.1| predicted protein [Fibroporia radiculosa]
Length = 564
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF- 149
G G G +LYV NL D+++LF G + R I+ +GRP S F T
Sbjct: 287 GHQGSNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGADGRPKGSGTVIFETAK 346
Query: 150 ---SPLFLWVQLKWY 161
+ ++ WY
Sbjct: 347 DAQQAIGMYNGFDWY 361
>gi|156089585|ref|XP_001612199.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799453|gb|EDO08631.1| conserved hypothetical protein [Babesia bovis]
Length = 119
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSV 140
L VSNL +T + ++ELFSE+G++++ I +D+ R V
Sbjct: 77 LKVSNLDHTITREHLKELFSEVGKVEKTWIDYDRTARSKV 116
>gi|380487764|emb|CCF37827.1| RNA binding protein [Colletotrichum higginsianum]
Length = 343
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 65 TIAKSFR---RTRNFPWQHDLFEDSLRAAGISGIEV----------GTKLYVSNLHPGVT 111
++ KSFR R + W HD FE+ G + K+ V N+H +T
Sbjct: 52 SVRKSFRDEPRNLDSEWVHDRFEEHDTRRGPAPRRRRDEPEQRDFNSAKIRVENIHYELT 111
Query: 112 NDDIRELFSEIGELKRYAIHFDKNGR 137
+D+ ELF+ IG + + + +D+ GR
Sbjct: 112 PEDLEELFNRIGPVAKLDLKYDRAGR 137
>gi|346971258|gb|EGY14710.1| nuclear cap-binding protein subunit 2 [Verticillium dahliae
VdLs.17]
Length = 186
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y K+ RR N + D+ A + T LYV NL T + + ELF
Sbjct: 14 RPSAYYHNKNKRRRYNDREEE---ADAPPAPQEDPLANSTTLYVGNLSFYTTEEQVYELF 70
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
++ GE+KR + D+ + CF +
Sbjct: 71 AKCGEIKRLVMGLDRFNKTPCG--FCFVEY 98
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
G+S G +LYV +LH ++ DI+++F GEL+ +H D
Sbjct: 390 GVSAPHGGMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRD 432
>gi|448111784|ref|XP_004201926.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359464915|emb|CCE88620.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 81 DLFEDSLRAAGISGIEV-GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
D E S +A G E+ T LYV LH V+ D +R+LFS G +K DKN RP
Sbjct: 53 DQMESSPASAVDGGREISNTILYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDKN-RPG 111
Query: 140 VS 141
S
Sbjct: 112 FS 113
>gi|198424069|ref|XP_002127821.1| PREDICTED: similar to nuclear cap binding protein subunit 2 [Ciona
intestinalis]
Length = 185
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
+++ + LYV NL T + I ELFS+ G+LKR + DK
Sbjct: 41 LKMSSTLYVGNLSYYTTEEQIYELFSKCGDLKRVVMGLDK 80
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N+ P VT+D+ RELF G++ +I +++G+
Sbjct: 236 TNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGK 274
>gi|392561626|gb|EIW54807.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 415
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G+ G +LYV NL D+++LF G + R I+ +GRP S F T
Sbjct: 133 FGGLNPGNQLYVGNLPYQAGWQDLKDLFRSAGNIIRADINIGLDGRPKGSGTVIFET 189
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 84 EDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSV 143
E+ + A +S I YV N++ GVT +++R+ FS+ G + + D+ G+
Sbjct: 295 EEQMMKAKVSNI------YVKNINVGVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGF 348
Query: 144 ACFAT 148
CF+T
Sbjct: 349 VCFST 353
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVAC 145
+LR + +G LYV N P T D+ ELF E GE+K + ++G VS
Sbjct: 294 ALRQKYMQHQALGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRVMVSESG---VSRGFG 350
Query: 146 FATFS 150
F +FS
Sbjct: 351 FVSFS 355
>gi|238880864|gb|EEQ44502.1| predicted protein [Candida albicans WO-1]
Length = 228
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 25/138 (18%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KK+ + + G A+ G GG G G +N +
Sbjct: 1 MSASLDKSLDDIISSNKKTFKSKRPG-AKFG----------AKGGNRVGKKIGGTNNNKK 49
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
P IAK F + + L A TK+ VS L + +D+I+E F
Sbjct: 50 P----IAK-FNKPAAAAAAAAVPAIDLSYA--------TKVNVSGLPKDLKHDNIKEFFQ 96
Query: 120 SEIGELKRYAIHFDKNGR 137
S+IG ++ A+ +++ G+
Sbjct: 97 SQIGGVQTVALSYNEKGQ 114
>gi|426193181|gb|EKV43115.1| hypothetical protein AGABI2DRAFT_188163, partial [Agaricus bisporus
var. bisporus H97]
Length = 882
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSVSSVACF 146
EVGT L+V N+ T+D++R LF G L+ I D GR + ACF
Sbjct: 437 EVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDLDTGRSRGTGFACF 488
>gi|413937758|gb|AFW72309.1| hypothetical protein ZEAMMB73_547300, partial [Zea mays]
Length = 215
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + +E +L A+ T LY+ N+ T + ELFS GE+K+ +
Sbjct: 15 RDRRFKGTQEEYEATLHAS--------TTLYIGNMSFYTTEEQAYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFVLY 82
>gi|14572590|emb|CAC42828.1| hrp65-2 isoform [Chironomus tentans]
Length = 517
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 80 HDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
HDL E SG +LY+ NL VT ++++ELFS GE+ I+ +KN
Sbjct: 97 HDLPELVCEEIKFSG---RNRLYIGNLTSDVTEEELKELFSPYGEISEAFINAEKN 149
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T LYV NL P VT + E FS G++ AI D+NG+
Sbjct: 194 TNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQ 232
>gi|358253500|dbj|GAA53299.1| polymerase delta-interacting protein 3 [Clonorchis sinensis]
Length = 172
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 85 DSLRAAGISGIEV----GTKLYVSNLHPGVTNDDIRELFSEIGELK 126
++L + +SG +V G ++ + NL P VT DD+ ELFS IG L+
Sbjct: 2 EALASIPVSGTKVSPIQGFRVEIRNLQPSVTLDDVFELFSSIGTLR 47
>gi|115400081|ref|XP_001215629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191295|gb|EAU32995.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 76 FPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
+P D +D A I G+ L+V+ +HP +T DI LF + G+++ +I D +
Sbjct: 36 YPRSIDPIDDDEEGA----INTGSNLFVTGIHPRLTEADISRLFEKYGDVENCSIMVDPH 91
Query: 136 GRPS 139
+ S
Sbjct: 92 TKES 95
>gi|429849976|gb|ELA25298.1| RNA binding domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 430
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
KL V N+H +T +D+ ELF+ IG + + + +D+ GR S F T S
Sbjct: 101 AKLRVDNVHYELTAEDLEELFNRIGPVVKLDLKYDRAGR---SEGIAFVTMS 149
>gi|389595349|ref|XP_003722897.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
gi|323364125|emb|CBZ13132.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
Length = 560
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVAC 145
+LR + +G LYV N P T D+ ELF E GE+K + ++G VS
Sbjct: 294 ALRQKYMQHQALGNNLYVRNFDPEFTGADLLELFKEYGEVKSCRVMVSESG---VSRGFG 350
Query: 146 FATFS 150
F +FS
Sbjct: 351 FVSFS 355
>gi|255942931|ref|XP_002562234.1| Pc18g03980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586967|emb|CAP94622.1| Pc18g03980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 157
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 89 AAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
A + IE G + SN+H + +D+ ELF+E GE+K ++++ D+
Sbjct: 32 AVAVRSIE-GWIIIASNIHEEASEEDVTELFAEYGEIKNFSLNLDR 76
>gi|384495100|gb|EIE85591.1| hypothetical protein RO3G_10301 [Rhizopus delemar RA 99-880]
Length = 359
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRP 138
T +YV NL VT DD+ ELFS IG + + D +P
Sbjct: 221 TNVYVKNLSSDVTEDDLGELFSTIGPVSSVLVQRDDQHKP 260
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 36.6 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G LYV N+ + +D +R+ FS G + + D+NGR CF
Sbjct: 342 GVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCF 390
>gi|358394186|gb|EHK43587.1| hypothetical protein TRIATDRAFT_85620 [Trichoderma atroviride IMI
206040]
Length = 1057
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+ G +++VS L P T D+IRE+FS+ G + R + NG+
Sbjct: 755 AVAEGREVHVSGLGPSTTEDEIREIFSKYGTIARINVPRSDNGK 798
>gi|220936494|gb|ACL83596.1| CBP20 [Hordeum vulgare]
gi|326508016|dbj|BAJ86751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 241
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R R FP + FE +L A+ +YV N+ T + ELFS GE+K+
Sbjct: 12 SVYRDRRFPGTQEEFEGALLAS--------LTVYVGNMSFYTTEEQAYELFSRAGEIKKI 63
Query: 129 AIHFDKNGRPSVSSVACFATF 149
+ DKN + CF +
Sbjct: 64 IMGLDKNTKTPCG--FCFILY 82
>gi|14572592|emb|CAC42830.1| hrp65-3 isoform [Chironomus tentans]
Length = 512
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 80 HDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
HDL E SG +LY+ NL VT ++++ELFS GE+ I+ +KN
Sbjct: 97 HDLPELVCEEIKFSG---RNRLYIGNLTSDVTEEELKELFSPYGEISEAFINAEKN 149
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
+ LYVSNL +TN DI LFS G++ R + D++ R S
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQS 97
>gi|386761306|ref|YP_006234941.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|385146322|dbj|BAM11830.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi PAGU611]
gi|396078441|dbj|BAM31817.1| RNP-1 like RNA-binding protein [Helicobacter cinaedi ATCC BAA-847]
Length = 81
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
LYV NL VT D++RELFS+ GE+ + D+ +GRP
Sbjct: 4 LYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRP 42
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 36.2 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 79 QHDL---FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
+H+L FE S++ A + G LYV NL + ++ ++ELFS G + + D N
Sbjct: 295 EHELKIKFEQSMKEA--ADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPN 352
Query: 136 GRPSVSSVACFAT 148
G S F+T
Sbjct: 353 GVSRGSGFVAFST 365
>gi|296414687|ref|XP_002837029.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632878|emb|CAZ81220.1| unnamed protein product [Tuber melanosporum]
Length = 520
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++YVSNL D+++LF + G + R +H +GRP S V F +
Sbjct: 328 QIYVSNLPYTAGWQDLKDLFRQAGAVVRADVHIGPDGRPKGSGVVAFES 376
>gi|409074598|gb|EKM74992.1| hypothetical protein AGABI1DRAFT_47085, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 777
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD-KNGRPSVSSVACF 146
EVGT L+V N+ T+D++R LF G L+ I D GR + ACF
Sbjct: 381 EVGTTLFVRNVPFTATDDELRLLFRSFGPLRYARITMDLDTGRSRGTGFACF 432
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LYV NL VT++ +RELF+E G + + D +G S F+ S
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAAS 379
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LYV NL VT++ +RELF+E G + + D +G S F+ S
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAAS 379
>gi|12850804|dbj|BAB28857.1| unnamed protein product [Mus musculus]
Length = 203
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 86 SLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
+ R G T+L+V NL P +T +++R+LF + G+ IH DK
Sbjct: 63 NFRKPGEKTFTQRTRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 111
>gi|402077280|gb|EJT72629.1| nuclear cap-binding protein subunit 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 186
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y + RR +D + + + + T LYV NL T + I ELF
Sbjct: 14 RPSAYFSHRKRRR-------NDDEDAEPQQPQVDPLAKATTLYVGNLSFFTTEEQIYELF 66
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
S+ GE+KR + D+ + CF +
Sbjct: 67 SKCGEIKRLVMGLDRFNKTPCG--FCFVEY 94
>gi|392927774|ref|NP_510259.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
gi|371570799|emb|CAA90446.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
Length = 575
Score = 36.2 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G LYV N+ + +D +R+ FS G + + D+NGR CF
Sbjct: 225 GVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCF 273
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
G LYV +L +T+D +RE+F+ G++ AI + NG + CF
Sbjct: 288 GRNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCF 336
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
T LYV NL P + + ++E FSE G++ I D+NG
Sbjct: 193 TNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENG 230
>gi|380495949|emb|CCF32001.1| RNP domain-containing protein [Colletotrichum higginsianum]
Length = 187
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 93 SGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+G + +YV NL +N+D+ ELF+ IG++++ I ++ +GR + V F
Sbjct: 80 AGTDRSETIYVRNLPWSTSNEDLVELFTTIGKVEQAEIQYEPSGRSRGTGVVRF 133
>gi|313143724|ref|ZP_07805917.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
gi|313128755|gb|EFR46372.1| RNA-binding protein RNP-1 [Helicobacter cinaedi CCUG 18818]
Length = 91
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRPS 139
LYV NL VT D++RELFS+ GE+ + D+ +GRP
Sbjct: 14 LYVGNLVYAVTQDELRELFSQFGEVFSVKLINDRESGRPK 53
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 36.2 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T LYV NL P VT D+ ELF + G + I D+ G+
Sbjct: 230 TNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGK 268
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ NL G ++ +RELF+E G + + D +G S+ F++
Sbjct: 311 AGANLYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAFSS 362
>gi|34922660|sp|Q9U1N0.1|HRP65_CHITE RecName: Full=Hrp65 protein; AltName: Full=Ct-Hrp65
gi|6687398|emb|CAB64926.1| Hrp65 protein [Chironomus tentans]
gi|14572591|emb|CAC42829.1| hrp65-1 isoform [Chironomus tentans]
Length = 535
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 80 HDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
HDL E SG +LY+ NL VT ++++ELFS GE+ I+ +KN
Sbjct: 97 HDLPELVCEEIKFSG---RNRLYIGNLTSDVTEEELKELFSPYGEISEAFINAEKN 149
>gi|340516569|gb|EGR46817.1| predicted protein [Trichoderma reesei QM6a]
Length = 1062
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+ G +++VS L+P + D++R++FS+ G ++R I NGR + F T
Sbjct: 754 AVAEGREVHVSGLNPSTSEDELRDVFSKYGTIQRVNIPRSINGRGRGFAFVVFGT 808
>gi|308453692|ref|XP_003089541.1| hypothetical protein CRE_15184 [Caenorhabditis remanei]
gi|308239873|gb|EFO83825.1| hypothetical protein CRE_15184 [Caenorhabditis remanei]
Length = 291
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 25/138 (18%)
Query: 2 ATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNARP 61
AT +DM+L DII +++K+++ G R + G GS S G RR
Sbjct: 66 ATPIDMALSDIISTKRKTKK--GVKRPIKKSAGGIKKRGSFSNA---GTPRRQSGGGQGG 120
Query: 62 SSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
I KS G S ++ +SNL V + D++ELF+
Sbjct: 121 VRKVIRKS-------------------VGGGSNDNRPVRINISNLAGTVLSSDLQELFNA 161
Query: 122 IGELKRYAIHFDKNGRPS 139
L++ +++F+++G P+
Sbjct: 162 F-NLRKVSVNFNEDGTPA 178
>gi|407860794|gb|EKG07505.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E G KL+VSNL T+ +RE F ++G ++R + +NG+ + T L
Sbjct: 193 EFGRKLFVSNLPFDCTSSALRETFQQVGNVERAEVILGRNGKSRGMGIVVMRTEKETRLA 252
Query: 156 VQ 157
++
Sbjct: 253 IE 254
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N++ VT+D+ RELF + GE+ ++ D+ G+
Sbjct: 242 TNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGK 280
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 104
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
+GTKLYV NL V N + +LFS GE++ + D+
Sbjct: 1 MGTKLYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDR 38
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N+ P VT+++ RELF + G++ I D +G+
Sbjct: 231 TNVYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGK 269
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
+ LYVSNL +TN DI LFS G++ R + D++ R S
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQS 97
>gi|443922295|gb|ELU41761.1| trehalose 6-phosphate phosphatase, glycosyltransferase family 20
protein [Rhizoctonia solani AG-1 IA]
Length = 1323
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+ ++G G +LYV NL D+++LF G + R I+ +GRP S F T
Sbjct: 92 SALAGTNPGNQLYVGNLPYQAGWQDLKDLFRTAGAIVRADINVGYDGRPKGSGTVIFETA 151
Query: 150 SPLFLWVQL----KWY 161
+Q+ WY
Sbjct: 152 KDAQAAIQMYNGYDWY 167
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 36.2 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE S++ A + G LYV NL + +D ++ELFS G + + D NG S
Sbjct: 296 FEQSMKEA--ADKYQGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSG 353
Query: 143 VACFAT 148
F+T
Sbjct: 354 FVAFST 359
>gi|71417144|ref|XP_810487.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70875023|gb|EAN88636.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E G KL+VSNL T+ +RE F ++G ++R + +NG+ + T L
Sbjct: 193 EFGRKLFVSNLPFDCTSSALRETFQQVGNVERAEVILGRNGKSRGMGIVVMRTEKETRLA 252
Query: 156 VQ 157
++
Sbjct: 253 IE 254
>gi|71413449|ref|XP_808862.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70873155|gb|EAN87011.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 276
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E G KL+VSNL T+ +RE F ++G ++R + +NG+ + T L
Sbjct: 193 EFGRKLFVSNLPFDCTSSALRETFQQVGNVERAEVILGRNGKSRGMGIVVMRTEKETRLA 252
Query: 156 VQ 157
++
Sbjct: 253 IE 254
>gi|343425209|emb|CBQ68745.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 231
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
T+LYV NLHP V + + FS+ G++K+ F K+G
Sbjct: 49 TRLYVGNLHPTVDEYALIQTFSKFGKIKKLDFLFHKSG 86
>gi|223948439|gb|ACN28303.1| unknown [Zea mays]
gi|413923015|gb|AFW62947.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 141
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 72 RTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIH 131
R R F + +E +L A+ T LY+ N+ T + ELFS GE+K+ +
Sbjct: 15 RDRRFKGTQEEYEAALLAS--------TTLYIGNMSFYTTEEQAYELFSRAGEIKKIIMG 66
Query: 132 FDKNGRPSVSSVACFATF 149
DKN + CF +
Sbjct: 67 LDKNSKTPCG--FCFVLY 82
>gi|448304706|ref|ZP_21494642.1| preprotein translocase subunit SecD [Natronorubrum sulfidifaciens
JCM 14089]
gi|445590087|gb|ELY44308.1| preprotein translocase subunit SecD [Natronorubrum sulfidifaciens
JCM 14089]
Length = 542
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 87 LRAAGISGIEV------GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG---R 137
+ AAG+SG V G + Y+ P + D++REL SE G ++ A H D+NG
Sbjct: 173 INAAGLSGGSVYDSARLGGEYYIVTEVPDMDPDELRELLSERGIVEVVAYHPDENGTQQN 232
Query: 138 PSVSSVACFATFSP 151
+V + A AT P
Sbjct: 233 ETVLTGADIATVDP 246
>gi|402910488|ref|XP_003917908.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 3 [Papio anubis]
Length = 463
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 33 GRGRGPSGSVSGGRMTGAARRGPLSNARPSSYTIAKSFRRTRNFPWQHDLFE-DSLRAAG 91
GR R PS R + R P S +A + RR ++ + + + R G
Sbjct: 7 GRHRAPSSRFRRSRALFSGRERPCS--------VAVTPRRDQSVEDEGLTIDLKNFRKPG 58
Query: 92 ISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
++L+V NL P +T +++R+LF + G+ IH DK
Sbjct: 59 EKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK 101
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
+YV NL VT +DI E+F E G + R ++ D+ +GRP
Sbjct: 3 IYVGNLSYDVTREDIEEVFKEYGRVNRVSLPMDRESGRP 41
>gi|407408043|gb|EKF31617.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 276
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 96 EVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFSPLFLW 155
E G KL+VSNL T+ +RE F ++G ++R + +NG+ + T L
Sbjct: 193 EYGRKLFVSNLPFDCTSSALRETFQQVGNVERAEVILGRNGKSRGMGIVVMRTEKETRLA 252
Query: 156 VQ 157
++
Sbjct: 253 IE 254
>gi|448308428|ref|ZP_21498305.1| preprotein translocase subunit SecD [Natronorubrum bangense JCM
10635]
gi|445593716|gb|ELY47885.1| preprotein translocase subunit SecD [Natronorubrum bangense JCM
10635]
Length = 542
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 87 LRAAGISGIEV------GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG---R 137
+ AAG+SG V G + Y+ P + D++REL SE G ++ A H D+NG
Sbjct: 173 INAAGLSGGSVYDSARLGGEYYIVTEVPDMDPDELRELLSERGIVEVVAYHPDENGTQQN 232
Query: 138 PSVSSVACFATFSP 151
+V + A AT P
Sbjct: 233 ETVLTGADIATVDP 246
>gi|378733184|gb|EHY59643.1| hypothetical protein HMPREF1120_07628 [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFD 133
+ GT L+V+ +HP +T D+ LF + GE++ +I D
Sbjct: 64 VNTGTNLFVTGIHPRLTEADVTRLFEKYGEVESCSIMLD 102
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 36.2 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N+ P VT+++ RELF + G++ ++ D+ G+
Sbjct: 240 TNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQEGK 278
>gi|443478888|ref|ZP_21068579.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443015762|gb|ELS30586.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 109
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
+YV NL VT DD++ +FSE G++ R + D+ +GRP
Sbjct: 3 IYVGNLSYEVTEDDLKAVFSEYGKITRVHLPIDRESGRP 41
>gi|358387438|gb|EHK25033.1| hypothetical protein TRIVIDRAFT_54648 [Trichoderma virens Gv29-8]
Length = 1024
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 94 GIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+ G +++VS L P T D+IRE+FS+ G + R + + +G+ + FAT
Sbjct: 753 AVAEGREVHVSGLSPSATEDEIREIFSKYGTISRINVPRNISGKGRGFAFVDFAT 807
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSV 143
L V NL +T+D +REL S GELK++ + D +G+ ++V
Sbjct: 851 LMVMNLPDSLTDDHVRELLSPFGELKKFNLLKDSSGKSKGTAV 893
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV NL P VT DD +LF + G + I D+ G+
Sbjct: 229 TNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQ 267
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ NL + +D ++ELFSE G + + D +G S F+T
Sbjct: 299 GVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFST 349
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 35.8 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACF 146
+YV NLH V D ++E+F +G+L I D G+ CF
Sbjct: 199 VYVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEGKSKGFGFVCF 244
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 35.8 bits (81), Expect = 7.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
G LY+ NL + +D ++ELFSE G + + D +G S F+T
Sbjct: 299 GVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFST 349
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 35.8 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV N+ P T DD R+LF + G++ ++ D+ G+
Sbjct: 241 TNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGK 279
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
G S + KLY+ L ND + E+FS+ GE++ ++ +DKN
Sbjct: 151 GQSADQAQRKLYIGGLSYDTANDKLLEVFSKYGEIEEGSVAYDKN 195
>gi|302903969|ref|XP_003048974.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729908|gb|EEU43261.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 176
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 60 RPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF 119
RPS+Y +++ RR +H E++ A + + T LYV NL T + + ELF
Sbjct: 14 RPSAYYQSRNKRRRDRDDGEH---EENAEPA-VDPLANATTLYVGNLSFYTTEEQVYELF 69
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF 149
S+ GE+KR + D+ + CF +
Sbjct: 70 SKCGEIKRLVMGLDRFSKTPCG--FCFVEY 97
>gi|443897468|dbj|GAC74808.1| RRM motif-containing protein [Pseudozyma antarctica T-34]
Length = 356
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFS-EIGELKRYAIHFDKNGRPSVSSVACFATF 149
G+K+ +SNL VT ++ELFS IG L++ A+ + NG+ S+ C F
Sbjct: 229 TGSKIILSNLPLDVTEAQVKELFSTTIGPLRKVAMSYRANGQ---STGVCTVEF 279
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T +D++ +F GEL+ + D+ GR
Sbjct: 278 RLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDETGR 315
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
KLYV NLH +T DIR +F G+++ + D++G
Sbjct: 328 KLYVGNLHVSITEADIRRVFEAFGQVELVQLPLDESG 364
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
+ LYVSNL +TN DI LFS G++ R + D++ R S
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQS 97
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNG 136
KLYV NLH +T DIR +F G+++ + D++G
Sbjct: 331 KLYVGNLHISITEADIRRVFEAFGQVELVQLPLDESG 367
>gi|91088465|ref|XP_969645.1| PREDICTED: similar to splicing factor proline- and glutamine-rich
[Tribolium castaneum]
gi|270012217|gb|EFA08665.1| hypothetical protein TcasGA2_TC006331 [Tribolium castaneum]
Length = 454
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGEL 125
+LY+ NL P VT DD++ELF + GE
Sbjct: 92 NRLYIGNLGPEVTEDDLKELFGKYGEF 118
>gi|326430719|gb|EGD76289.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 642
Score = 35.8 bits (81), Expect = 7.9, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LYV N + VT +D+R+ F E G + + DK G VS F TF+
Sbjct: 428 GGNLYVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEG---VSRCFGFVTFA 477
>gi|241953293|ref|XP_002419368.1| RNA-binding RNA annealing protein, putative; mRNA export protein,
putative [Candida dubliniensis CD36]
gi|223642708|emb|CAX42962.1| RNA-binding RNA annealing protein, putative [Candida dubliniensis
CD36]
Length = 230
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 38/185 (20%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR 60
M+ +D SLDDII S KK+ + + G +G G+ G ++ G + P++
Sbjct: 1 MSASLDKSLDDIISSNKKTFKSKRPGAKFGAKG------GNRVGKKIGGTNNKKPIA--- 51
Query: 61 PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELF- 119
F R ++ + TK+ VS L + +D+I+E F
Sbjct: 52 --------KFNRPAAAAAAAVAAVPTID------LSYATKVNVSGLPKDLKHDNIKEFFQ 97
Query: 120 SEIGELKRYAIHFDKNGRPSVSSVACFATF---SPLFLWVQLKWYMPEEV------MHLQ 170
S+IG ++ A+ +++ G+ FAT S F + Y + + L+
Sbjct: 98 SQIGGVQTVALTYNEKGQ-----FKGFATIIFKSSKFATAAVDKYNGASIDGGAAKLRLE 152
Query: 171 LLSDT 175
L+ DT
Sbjct: 153 LIIDT 157
>gi|156839481|ref|XP_001643431.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114041|gb|EDO15573.1| hypothetical protein Kpol_487p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 376
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 85 DSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVA 144
D + G E +Y SNL D+ +LF IG+LK + FD+ G P+ ++
Sbjct: 284 DQFTDGVVGGGEKNELIYCSNLPFSTAKSDLFDLFETIGKLKNAELKFDQKGNPTGVAIV 343
Query: 145 CFATFSPLFLWVQ 157
+ + V
Sbjct: 344 EYENVDDAQVCVD 356
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 94 GIEVGTK-LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKN 135
G EV K LYV LH VT+D +++LFS G +K I DKN
Sbjct: 73 GREVSKKILYVGGLHKSVTDDMLKDLFSVAGGIKSVKILNDKN 115
>gi|449687377|ref|XP_002170842.2| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Hydra magnipapillata]
Length = 316
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
+G+K++V LH V + D+ LF+ G + + DKN R S V F+T
Sbjct: 46 LGSKIFVKCLHEDVNDSDLNHLFARFGSITSCYVLRDKNRRSKGSGVVKFST 97
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 35.8 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LY+ NL G ++ +RELF E G + + D +G VS + F FS
Sbjct: 317 GANLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASG---VSRGSAFVAFS 366
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T +D++ +F GEL+ + D+ GR
Sbjct: 276 RLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDETGR 313
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D+R +F GEL+ + D GR
Sbjct: 311 RLYVGNIHFSITESDLRNVFEPFGELEFVQLQKDDTGR 348
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 90 AGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIG 123
A +SG E G KLYV NL GVTND + ++F++ G
Sbjct: 9 AAVSG-EEGVKLYVGNLSWGVTNDSLADVFNQYG 41
>gi|115460844|ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa Japonica Group]
gi|113565593|dbj|BAF15936.1| Os04g0636900 [Oryza sativa Japonica Group]
gi|215715302|dbj|BAG95053.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764985|dbj|BAG86682.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 515
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK-NGRP 138
K++V N+H V D + E FS+ GE++ + FDK G+P
Sbjct: 231 KIFVGNVHADVDVDRLYEYFSQFGEIEEGPLGFDKTTGKP 270
>gi|159163867|pdb|2CQH|A Chain A, Solution Structure Of The Rna Binding Domain Of Igf-Ii
Mrna- Binding Protein 2
Length = 93
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 91 GISGIEVGTKLYVSNLHPGVTNDDIRELFSE 121
G SG KLY+ NL P VT DD+R+LF +
Sbjct: 1 GSSGSSGMNKLYIGNLSPAVTADDLRQLFGD 31
>gi|448114345|ref|XP_004202551.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359383419|emb|CCE79335.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 81 DLFEDSLRAAGISGIEV-GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPS 139
D E S +A G E+ T LYV LH V+ D +R+LFS G +K DKN RP
Sbjct: 53 DQSESSPASAVDGGREISNTILYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDKN-RPG 111
Query: 140 VS 141
S
Sbjct: 112 FS 113
>gi|348532650|ref|XP_003453819.1| PREDICTED: hypothetical protein LOC100706680 [Oreochromis niloticus]
Length = 1145
Score = 35.8 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 69 SFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRY 128
S R +R +H++ L+A I+ +YV + +T+D++RE FS+ GE++
Sbjct: 1000 SSRESRKLRREHEIRIQKLKA-----IDERRVVYVGRIRRSMTHDELRERFSQFGEVECV 1054
Query: 129 AIHFDKNG 136
++HF G
Sbjct: 1055 SLHFRDRG 1062
>gi|112982916|ref|NP_001037578.1| RNA binding motif protein Y14 [Bombyx mori]
gi|95102578|gb|ABF51227.1| RNA binding motif protein [Bombyx mori]
gi|95115210|gb|ABF55971.1| Tsu [Bombyx mori]
gi|221579722|gb|ACM24353.1| RNA-binding motif protein Y14 [Bombyx mori]
Length = 166
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
L+VSN+H +DI+ FSE GE+K ++ D+
Sbjct: 79 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDR 112
>gi|440794582|gb|ELR15742.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 257
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFAT 148
T + ++NL V++DD++ L G+L + I FD++GR ++ A F +
Sbjct: 136 TTVEITNLSYDVSSDDLKRLLGGDGDLLKVHIAFDRSGRSEGTAKAVFES 185
>gi|401419166|ref|XP_003874073.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490307|emb|CBZ25567.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 420
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 95 IEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
I G+KL+V + T D +R LF++ G L I + NGR
Sbjct: 176 INAGSKLFVGQVPAVCTEDQLRPLFAQFGTLLEIKIMREPNGR 218
>gi|225715720|gb|ACO13706.1| RNA-binding protein 8A [Esox lucius]
Length = 175
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
L+V+ +H G T +DI + F+E GE+K ++ D+
Sbjct: 75 LFVTGVHEGATEEDIHDEFAEFGEIKNLHLNLDR 108
>gi|326476777|gb|EGE00787.1| RNP domain-containing protein [Trichophyton tonsurans CBS 112818]
Length = 436
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 100 KLYVSNLHPGVTNDDIRELF---SEIGELKRYAIHFDKNGRPSVSSVACFAT 148
++YV+NL V D+++LF ++ G + R +H D +GRP S + F +
Sbjct: 163 QIYVANLPYNVGWQDLKDLFRQATQQGAVVRADVHMDASGRPKGSGIVAFES 214
>gi|389609977|dbj|BAM18600.1| tsunagi [Papilio xuthus]
Length = 166
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDK 134
L+VSN+H +DI+ FSE GE+K ++ D+
Sbjct: 79 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDR 112
>gi|237845047|ref|XP_002371821.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|211969485|gb|EEB04681.1| RNA recognition motif domain containing protein [Toxoplasma gondii
ME49]
gi|221483528|gb|EEE21847.1| cold-inducible RNA binding protein, putative [Toxoplasma gondii
GT1]
gi|221508001|gb|EEE33588.1| nucleolar phosphoprotein, putative [Toxoplasma gondii VEG]
Length = 513
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 55 PLSNARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDD 114
P NA PS + KS R+ + ++ ED+ A SG+ K+++ N+ P T ++
Sbjct: 202 PQPNAVPSQKSGTKSSRKAPSQSARNS--EDNEEQALASGV----KVFIGNVMPTTTEEE 255
Query: 115 IRELFSEIGELKRYAIHFDKNGRPSVSSVACFATF 149
+ E+F GE + D+ RP A F TF
Sbjct: 256 LYEIFRSFGECSGLVLLRDRRQRP---RGAGFVTF 287
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 35.4 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 99 TKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
T +YV NL P VT ++ +LF + G++ AI D+ G+
Sbjct: 260 TNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGK 298
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 35.4 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 98 GTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSSVACFATFS 150
G LY+ NL G ++ +RELF E G + + D +G VS + F FS
Sbjct: 323 GANLYIKNLEDGADDETLRELFKEFGTITSCRVMRDASG---VSRGSAFVAFS 372
>gi|341904438|gb|EGT60271.1| hypothetical protein CAEBREN_30464 [Caenorhabditis brenneri]
Length = 633
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 1 MATHVDMSLDDIIKSRKKSERERGQGRARRGRGRGRGPSGSVSGGRMTGAARRG-PLSNA 59
MA ++MSLDDIIK KK + E G + S SG + RR P NA
Sbjct: 365 MADRINMSLDDIIKRDKKVKTESKAGTSNGNNSNKNAGSNKPSGAKRNNNNRRAPPAKNA 424
Query: 60 R 60
R
Sbjct: 425 R 425
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T DD++ +F GEL+ + ++ GR
Sbjct: 258 RLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGR 295
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 100 KLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
+LYV N+H +T D+R +F GEL+ + + NGR
Sbjct: 313 RLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGR 350
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 35.4 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 83 FEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGRPSVSS 142
FE S++ A + G LYV NL + ++ ++ELFS G + + D NG S
Sbjct: 299 FEQSMKEA--ADKYQGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSG 356
Query: 143 VACFAT 148
F+T
Sbjct: 357 FVAFST 362
>gi|395323376|gb|EJF55850.1| hypothetical protein DICSQDRAFT_72768 [Dichomitus squalens LYAD-421
SS1]
Length = 209
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 101 LYVSNLHPGVTNDDIRELFSEIGELKRYAIHFDKNGR 137
L++S LH T +D+R F G ++R I DKNGR
Sbjct: 124 LFISRLHKNATENDLRREFEGFGSIERVRIVRDKNGR 160
>gi|169851299|ref|XP_001832340.1| RNA annealing factor [Coprinopsis cinerea okayama7#130]
gi|116506606|gb|EAU89501.1| RNA annealing factor [Coprinopsis cinerea okayama7#130]
Length = 229
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 97 VGTKLYVSNLHPGVTNDDIRELF-SEIGELKRYAIHFDKNGR 137
+ K+ VSNL V ++ELF S +G L+ +H+D NG+
Sbjct: 71 LADKIIVSNLPIDVNEAQVKELFASTVGPLRDVTLHYDANGK 112
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,041,485,820
Number of Sequences: 23463169
Number of extensions: 129351760
Number of successful extensions: 568885
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 613
Number of HSP's that attempted gapping in prelim test: 563860
Number of HSP's gapped (non-prelim): 3937
length of query: 184
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 51
effective length of database: 9,238,593,890
effective search space: 471168288390
effective search space used: 471168288390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)