BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029988
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 337 bits (863), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 157/172 (91%), Positives = 167/172 (97%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
MGQQ+LIYSFVARGTVIL EYTEF GNFT++A+QCLQKLP++NNKFTYNCDGHTFNYLVE
Sbjct: 66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 125
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQY 120
NGFTYCVVAVES GRQIP+AFLERVKEDFNKRYGGGKA TA ANSLN+EFGSKLKEHMQY
Sbjct: 126 NGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQY 185
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
CVDHP+EISKLAKVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ
Sbjct: 186 CVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 237
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/172 (92%), Positives = 168/172 (97%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVE
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQY 120
NGFTYCVVAV+SAGRQIP+AFLERVKEDFNKRYGGGKAATA ANSLNKEFGSKLKEHMQY
Sbjct: 61 NGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
C+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ
Sbjct: 121 CMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 336 bits (862), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 157/172 (91%), Positives = 167/172 (97%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
MGQQSLIYSFVARGTVILAEYTEF GNFTS+A+QCLQKLP++NNKFTYNCDGHTFNYL +
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQY 120
NGFTYCVV +ESAGRQIP+AFLERVKEDFNKRYGGGKA+TA ANSLNKEFGSKLKEHMQY
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
C DHPEEISKL+KVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ
Sbjct: 121 CADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 335 bits (859), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 157/172 (91%), Positives = 168/172 (97%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVE
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQY 120
+GFTYCVVAV+SAGRQIP++FLERVKEDFNKRYGGGKAATA ANSLNKEFGSKLKEHMQY
Sbjct: 61 DGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
C+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ
Sbjct: 121 CMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/173 (74%), Positives = 149/173 (86%), Gaps = 1/173 (0%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNN-KFTYNCDGHTFNYLV 59
MGQ+S IYSFVARGT+ILAEYTEFTGNF SIA+QCLQKLP+++N KFTYNCD HTFN+LV
Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLV 60
Query: 60 ENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQ 119
E+G+ YCVVA +S +QI IAFLERVK DF KRYGGGKA+TA+A SLNKEFG +KEHM
Sbjct: 61 EDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMN 120
Query: 120 YCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
Y VDH EEI KL KVKAQVSEVK +M+ENI+K +DRGE + +L DKTENLRSQ
Sbjct: 121 YIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQ 173
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 270 bits (691), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/162 (79%), Positives = 143/162 (88%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
M QQSL YSF+ARGTVIL E+T+F GNFTS+A+Q L+ LP++NNKFTYNCDGHTFN LVE
Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVE 60
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQY 120
NGFTYCVVAV+SAGR+IP+AFLERVKEDF KRYGG KAAT ANSLNKEFGS LKEHMQY
Sbjct: 61 NGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELL 162
C+DHP+EIS LAK KAQVSEVK +MMENIEKVL RG E+L
Sbjct: 121 CMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML 162
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 147/193 (76%), Gaps = 19/193 (9%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
M Q+ LIYSFVA+GTV+LAE+T ++GNF++IA QCLQKLP ++K+TY+CDGHTFN+LV+
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAAT-------------------A 101
NGF + VVA ES GR +P FLERVKEDF KRY +
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 102 VANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIEL 161
VA +L++EFG LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKIEL
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180
Query: 162 LVDKTENLRSQVN 174
LVDKTENL+ Q +
Sbjct: 181 LVDKTENLQFQAD 193
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 140 bits (352), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNK-FTYNCDGHTFNYLVENGF 63
+++Y+ VARGTV+L+E+T + N ++IA Q L+K+P N+ +Y+ D + F+ +G
Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVD 123
T +A E+AGR+IP AFLE + + F + YG TA+A ++N+EF L + + Y +
Sbjct: 62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSN 120
Query: 124 HPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLR 170
P ++ ++K ++++V+GVM+ENI+KVLDRGE++ELLVDKT N++
Sbjct: 121 DPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQ 166
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 139 bits (351), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 115/168 (68%), Gaps = 4/168 (2%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENG 62
++I++ VARGTV+L+E++ + N +SI+ Q L+KLP +++ +Y+ D + F+ +G
Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDG 61
Query: 63 FTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCV 122
T +A E+AGR IP AFL+ + + F K YG +A A S+N EF L + M++
Sbjct: 62 LTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 123 DHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLR 170
+ P +++++K ++S+V+ VM+ENI+KVLDRGE++ELLVDKTEN++
Sbjct: 121 NDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQ 167
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPAT-NNKFTYNCDGHTFNYLVENGF 63
S++Y+ VARGTV+LAE + + N ++IA Q L+K+P ++ +Y+ D + F+ +G
Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVD 123
T +A E AGR+IP +FLE + + F + YG +A A ++N EF L + ++Y +
Sbjct: 62 TVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSN 120
Query: 124 HPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLR 170
P ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++
Sbjct: 121 DPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQ 166
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 110/169 (65%), Gaps = 4/169 (2%)
Query: 4 QSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVEN 61
+++Y+ VARGTV+LAE++ TGN ++ + L+KL ++ + ++ D + F+ L +
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60
Query: 62 GFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYC 121
G T+ +A ++ GR++P ++LE + F K YG A A A ++N EF L + M++
Sbjct: 61 GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFF 119
Query: 122 VDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLR 170
+P + L +V+ +VSE++ VM+ENIEK+++RG++IELLVDKT ++
Sbjct: 120 SSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQ 167
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 14/187 (7%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFT 64
+++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRII 61
Query: 65 YCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDH 124
Y + + R FL +K+ F Y G +A TA+ ++N EF S L ++Y H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--------RSQVN 174
E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKTENL + N
Sbjct: 118 SESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRN 177
Query: 175 LAVADCL 181
LA A C+
Sbjct: 178 LARAMCM 184
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 14/187 (7%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFT 64
+++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDH 124
Y + + R +FL VK+ F Y G +A TA+ ++N EF S L +++ H
Sbjct: 62 YLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PE--EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--------RSQVN 174
E + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + N
Sbjct: 118 SENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRN 177
Query: 175 LAVADCL 181
LA A C+
Sbjct: 178 LARAMCM 184
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Query: 6 LIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTY 65
+IYS VARG+ +LAE+T GNF +I + L +P + K +Y + + F+YLV + TY
Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTY 62
Query: 66 CVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHP 125
+A E GR+IP FL+ VK F Y G K TA+A +N +F L+ M + +
Sbjct: 63 LCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNT 120
Query: 126 EEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKIELLVDKTENLRSQ 172
+ +++ A++ EVK +++ +I ++L RGEKIE+LV++T+ L Q
Sbjct: 121 TRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQ 168
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 109/185 (58%), Gaps = 10/185 (5%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFT 64
+++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDH 124
Y + + R FL VK+ F Y G +A TA+ ++N EF S L +++ ++
Sbjct: 62 YLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 125 PEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--------RSQVNLA 176
+ + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + NLA
Sbjct: 121 -QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLA 179
Query: 177 VADCL 181
A C+
Sbjct: 180 RAMCV 184
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 14/187 (7%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFT 64
+++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDH 124
Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--------RSQVN 174
E + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + N
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRN 177
Query: 175 LAVADCL 181
LA A C+
Sbjct: 178 LARAMCM 184
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 14/187 (7%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFT 64
+++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDH 124
Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--------RSQVN 174
E + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + N
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRN 177
Query: 175 LAVADCL 181
LA A C+
Sbjct: 178 LARAMCM 184
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 14/187 (7%)
Query: 5 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFT 64
+++++ VARGT ILA++ GNF + Q L K+P+ NNK TY + F+Y+ ++
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIV 61
Query: 65 YCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDH 124
Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL--------RSQVN 174
E + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + N
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRN 177
Query: 175 LAVADCL 181
LA A C+
Sbjct: 178 LARAMCM 184
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Query: 1 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVE 60
M Q ++Y+ V+ V L E+ GNF +A + + K+P T+ K Y + H F+Y+ E
Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISE 59
Query: 61 NGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQY 120
N + + E G QIP FL +++ F + YG + + + + F L+E M+Y
Sbjct: 60 NDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYD-PFIRVLEERMKY 118
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
+P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKTE L+S+
Sbjct: 119 -YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSE 168
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + N+ T +F+Y++E G Y V+ +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+ +F++++G + S EF + +++ + +D L+ + ++ +V+ +M
Sbjct: 92 QAEFHEQHGKKVPTVSRPYSF-IEFDTYIQKTKKSYIDSRAR-RNLSNINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKASNLSS 175
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 32 ASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFN 90
A L++L P + + + +TF+YL++NG Y + +S R++ ++LE + +F
Sbjct: 35 AKLILKRLSPTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFW 94
Query: 91 KRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIE 150
+G + +F + +++ + + P L K+ ++ +V VM +NIE
Sbjct: 95 NSFGEEALQPGLRPYAFVQFDTFMQKSKR-VYNTPRANDNLDKLNTELKDVTRVMTKNIE 153
Query: 151 KVLDRGEKIELLVDKTENLR 170
+L RG+ +E + D + +LR
Sbjct: 154 DLLYRGDSLEKMADLSSDLR 173
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + + T TF+Y++E G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+F++++G + S EF + +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQHGKKVPTVSRPYSF-IEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKANNLSS 175
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + + T TF+Y++E G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+F++++G + S EF + +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQHGKKVPTVSRPYSF-IEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKANNLSS 175
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + + T TF+Y++E G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+F++++G + S EF + +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQHGKKVPTVSRPYSF-IEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKANNLSS 175
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + + T TF+Y++E G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+F++++G + S EF + +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQHGKKVPTVSRPYSF-IEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKANNLSS 175
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + + T F+Y++E G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+ +F++++G + S EF + +++ + +D L + ++ +V+ +M
Sbjct: 92 QSEFDEQHGKKVPTVSRPYSFI-EFDTYIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKANNLSS 175
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 32 ASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFN 90
A Q +KL + + T TF+YL+E G Y V+ + +++ A+LE + +F+
Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFD 96
Query: 91 KRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIE 150
+++G + S EF + +++ + +D L+ V ++ +V+ +M+ NIE
Sbjct: 97 EQHGKKVPTVSRPYSF-IEFDNYIQKTKKSYIDSRAR-RNLSSVNTELQDVQRIMVANIE 154
Query: 151 KVLDRGEKIELLVDKTENL 169
+VL RGE + L K NL
Sbjct: 155 EVLLRGEALSALDSKASNL 173
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 28 FTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVK 86
+ S A Q +KL + + T F+Y++E G Y + +++ A+LE ++
Sbjct: 33 YQSQAKQLCRKLNEQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLE 92
Query: 87 EDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMM 146
+F+++YG + + S EF + +++ ++ +D L + +++ +V+ +M+
Sbjct: 93 GEFSEQYGAKVPSVSRPYSF-IEFDTYIQKTIKSYIDSRAR-RNLGNINSELHDVQRIMV 150
Query: 147 ENIEKVLDRGEKIELLVDKTENLRS 171
NIE+VL RGE + L K NL S
Sbjct: 151 ANIEEVLQRGEALSALDSKASNLSS 175
>sp|Q6C880|SEC22_YARLI Protein transport protein SEC22 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC22 PE=3 SV=1
Length = 213
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 27 NFTSIASQC---LQKLPATN-NKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFL 82
N + QC QKL A + ++ + + +YL+++G Y ++ S R++ ++L
Sbjct: 26 NLSEQKKQCKLVTQKLSANSADRASIESGNYVIHYLMKDGIVYYCISESSYPRKLAFSYL 85
Query: 83 ERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVK 142
+ + +F K +G V EF + +++ + D L K+ ++ +V
Sbjct: 86 DELDREFQKSHGQEALKEGVRPYKFVEFDTFMQKTKRVYQD-TRATHNLDKLNTELQDVT 144
Query: 143 GVMMENIEKVLDRGEKIELLVDKTENLRSQ 172
VM +NIE +L RG ++ + D + NLR++
Sbjct: 145 RVMTKNIEDLLHRGHSLDHMSDLSSNLRTE 174
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 27 NFTSIASQCLQKL-PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERV 85
+ S A Q +KL + + T TF+Y++E G V+ + + + A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCDLVLCEAAFPKTLAFAYLEDL 91
Query: 86 KEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+F++++G + S EF + +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQHGKKVPTVSRPYSF-IEFDTFIQKTKKLYIDSCAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKVLDRGEKIELLVDKTENLRS 171
+ NIE+VL RGE + L K NL S
Sbjct: 150 VANIEEVLQRGEALSALDSKANNLSS 175
>sp|Q32N70|YKT6B_XENLA Synaptobrevin homolog YKT6-B OS=Xenopus laevis GN=ykt6-b PE=2 SV=1
Length = 198
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ LE+V E+F+ + + G AT N+L+ +
Sbjct: 69 YVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALDS-YL 127
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
SK + +P + ++KV+A++ E K V+ +E +L RGEK++ LV K+E L +
Sbjct: 128 SKYQ--------NPRDADPMSKVQAELDETKIVLHNTMESLLQRGEKLDDLVSKSEVLGT 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q6DDU7|YKT6A_XENLA Synaptobrevin homolog YKT6-A OS=Xenopus laevis GN=ykt6-a PE=2 SV=1
Length = 198
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ LE+V E+F+ + + G AT N+L+ +
Sbjct: 69 YVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALDS-YL 127
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
SK + +P + ++KV+A++ E K ++ +E +L RGEK++ LV K+E L +
Sbjct: 128 SKYQ--------NPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGT 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q6P816|YKT6_XENTR Synaptobrevin homolog YKT6 OS=Xenopus tropicalis GN=ykt6 PE=2 SV=1
Length = 198
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ LE+V E+F+ + + G AT N+L+ +
Sbjct: 69 YVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALD-SYL 127
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
SK + +P + ++KV+A++ E K ++ +E +L RGEK++ LV K+E L +
Sbjct: 128 SKYQ--------NPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGT 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q9CQW1|YKT6_MOUSE Synaptobrevin homolog YKT6 OS=Mus musculus GN=Ykt6 PE=2 SV=1
Length = 198
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ LE+V ++F+K+ + G AT L+
Sbjct: 69 YVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQYTGLDDHL- 127
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
SK + +P E ++KV+A++ E K ++ +E +L+RGEK++ LV K+E L +
Sbjct: 128 SKYQ--------NPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGT 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q5EGY4|YKT6_RAT Synaptobrevin homolog YKT6 OS=Rattus norvegicus GN=Ykt6 PE=1 SV=1
Length = 198
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ LE+V ++F+K+ + G AT +L+
Sbjct: 69 YVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHYTALDGHLS 128
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
+P E ++KV+A++ E K ++ +E +L+RGEK++ LV K+E L +
Sbjct: 129 R---------YQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGT 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q7ZUN8|YKT6_DANRE Synaptobrevin homolog YKT6 OS=Danio rerio GN=ykt6 PE=2 SV=1
Length = 198
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ L++V ++F+++ + G AT +L+
Sbjct: 69 YVRNDNLGGVVIADSEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQYTALDSHLA 128
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
+P E + KV+A++ E K ++ +E +L+RGEK++ LV K+E+L +
Sbjct: 129 R---------YQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGN 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q3T000|YKT6_BOVIN Synaptobrevin homolog YKT6 OS=Bos taurus GN=YKT6 PE=2 SV=1
Length = 198
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKE-FGSKLK 115
Y+ + V+A ++ LE+V ++F+K+ T +++ S+L
Sbjct: 69 YVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPTGSPDTIRYSGLDSQLS 128
Query: 116 EHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
+ +P E + KV+A++ E K ++ +E +L+RGEK++ LV K+E L
Sbjct: 129 RYQ-----NPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVL 177
>sp|O15498|YKT6_HUMAN Synaptobrevin homolog YKT6 OS=Homo sapiens GN=YKT6 PE=1 SV=1
Length = 198
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 57 YLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKR-----YGGGKAATAVANSLNKEFG 111
Y+ + V+A ++ LE+V ++F+K+ + G AT +L+
Sbjct: 69 YVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHYPALDGHLS 128
Query: 112 SKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
+P E + KV+A++ E K ++ +E +L+RGEK++ LV K+E L +
Sbjct: 129 R---------YQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGT 179
Query: 172 Q 172
Q
Sbjct: 180 Q 180
>sp|Q6CJA0|SEC22_KLULA Protein transport protein SEC22 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC22 PE=3 SV=1
Length = 214
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 40 PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAA 99
P + N+ T +Y+ N Y VVA + R + ++L ++++F YGG +
Sbjct: 43 PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSK 102
Query: 100 TAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 159
+ V F + L++ + D + + ++ + VK +M +NIE +L RG+ +
Sbjct: 103 SNVRPYEFVSFDNFLQKTKKVYNDKRVQ-GNMDQLNQDLKGVKQIMTKNIEDLLYRGDSL 161
Query: 160 ELLVDKTENLR 170
+ + D + +LR
Sbjct: 162 DKMSDMSASLR 172
>sp|Q92356|SYB1_SCHPO Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=syb1 PE=3 SV=1
Length = 121
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 130 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
K A ++ Q+ + G+M ENI KV +RGE+++ L DKT+NL
Sbjct: 31 KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNL 70
>sp|Q6BSL0|YKT6_DEBHA Synaptobrevin homolog YKT6 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=YKT6 PE=3 SV=1
Length = 200
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 49 NCDGHTFNYLVENGFTYCVVAVESAGRQIPI----AFLERVKEDFNKRYGGGKAATAVAN 104
N GHT Y G CV+ + ++ P+ + ++ E++ + A A
Sbjct: 63 NYIGHT--YTRSEGLA-CVIITD---KEYPVRPAYTLINKILEEYLSLHPQKDWANISAT 116
Query: 105 SLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVD 164
N F EH P + + KV+ ++ E K V+ + IE VL RGEK++ LVD
Sbjct: 117 --NASFNYDNLEHYIKKYQDPSQADSIMKVQQELDETKIVLHKTIESVLQRGEKLDSLVD 174
Query: 165 KTENLRS 171
K+E L S
Sbjct: 175 KSEALSS 181
>sp|Q6C537|YKT6_YARLI Synaptobrevin homolog YKT6 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=YKT6 PE=3 SV=1
Length = 200
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 8 YSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCV 67
YS+ R TV A FT +A + + + D YL +G +
Sbjct: 28 YSWFERSTVGQA--------FTFLAETVIPRTEPGQRQSVEENDYVGHAYLRSDGLGGVI 79
Query: 68 VAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEE 127
+ + ++ L +V E++ ++ + A S +K +L+++++ D P +
Sbjct: 80 ITDQEYPVRVAYTLLNKVLEEYLTKHPKAEWENAKEAS-SKLAMPELEDYVKRYQD-PHQ 137
Query: 128 ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
+ +V+ ++ E K V+ + IE VL RGE+++ LVDK+E L
Sbjct: 138 ADAIMRVQQELDETKIVLHKTIESVLARGERLDTLVDKSEAL 179
>sp|Q74ZD2|SEC22_ASHGO Protein transport protein SEC22 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC22
PE=3 SV=2
Length = 214
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 40 PATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAA 99
P + N+ T + +Y+ + Y V+ R + A+L V+ +F YG
Sbjct: 43 PQSANEATLESGAYEMHYVRQQSVVYIVIVERGYPRNLAFAYLADVRHEFEHSYGNEYVK 102
Query: 100 TAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 159
+V F + L++ + D + L ++ + + VK +M +NIE +L RG+ +
Sbjct: 103 PSVRPYAFVSFDNFLQKTKKIYNDKRVQ-GNLDQLNSDLLGVKQIMTKNIEDLLYRGDSL 161
Query: 160 ELLVDKTENLR 170
+ + D + +LR
Sbjct: 162 DRMSDLSASLR 172
>sp|Q757A4|YKT6_ASHGO Synaptobrevin homolog YKT6 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YKT6 PE=3 SV=1
Length = 200
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 113 KLKEHMQYCVDH--PEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
KL+E Y + P + + +V+ ++ E K V+ + IE VL RGEK++ LVDK+E+L
Sbjct: 121 KLRELEMYLAKYQDPSQADSIMRVQQELDETKIVLHKTIESVLQRGEKLDNLVDKSESL 179
>sp|O75379|VAMP4_HUMAN Vesicle-associated membrane protein 4 OS=Homo sapiens GN=VAMP4 PE=1
SV=2
Length = 141
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 129 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
K+ V+ QV EV VM ENI KV++RGE+++ L DK+E+L
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESL 91
>sp|Q32L97|VAMP4_BOVIN Vesicle-associated membrane protein 4 OS=Bos taurus GN=VAMP4 PE=2
SV=1
Length = 141
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 129 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
K+ V+ QV EV VM ENI KV++RGE+++ L DK+E+L
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESL 91
>sp|O70480|VAMP4_MOUSE Vesicle-associated membrane protein 4 OS=Mus musculus GN=Vamp4 PE=1
SV=1
Length = 141
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 129 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
K+ V+ QV EV VM ENI KV++RGE+++ L DK+E+L
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESL 91
>sp|P35589|SYB_APLCA Synaptobrevin OS=Aplysia californica PE=2 SV=1
Length = 180
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 126 EEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRS 171
E+ +L + +AQV EV +M N+EKVLDR +KI L D+ E L++
Sbjct: 17 EQSKRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQA 62
>sp|Q6FW27|YKT6_CANGA Synaptobrevin homolog YKT6 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YKT6 PE=3
SV=1
Length = 205
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 97 KAATAVANSLNKEFGSKLKEHMQYCVDH--PEEISKLAKVKAQVSEVKGVMMENIEKVLD 154
K+ TA +SL K+ E Y + P + + KV+ ++ E K V+ + IE VL
Sbjct: 116 KSITATNDSL------KMAELSTYISKYQDPAQADAIMKVQQELDETKIVLHKTIENVLQ 169
Query: 155 RGEKIELLVDKTENL 169
RGEK++ LVDK+E+L
Sbjct: 170 RGEKLDNLVDKSESL 184
>sp|P36015|YKT6_YEAST Synaptobrevin homolog YKT6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YKT6 PE=1 SV=1
Length = 200
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 125 PEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL 169
P + + KV+ ++ E K V+ + IE VL RGEK++ LVDK+E+L
Sbjct: 135 PSQADAIMKVQQELDETKIVLHKTIENVLQRGEKLDNLVDKSESL 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,494,493
Number of Sequences: 539616
Number of extensions: 2591676
Number of successful extensions: 9297
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 9160
Number of HSP's gapped (non-prelim): 154
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)