BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029999
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O26373|Y273_METTH UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=MTH_273 PE=3 SV=1
Length = 151
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 13/154 (8%)
Query: 31 INHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHW 90
N +GR+P +YT +G+ NISP L W VP KSLAL+ +D DAP WTHW
Sbjct: 8 FNDRGRIPSRYTCDGE----NISPPLSWDGVPGEAKSLALICDDPDAPSKV-----WTHW 58
Query: 91 VVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYA 150
V+ NIPP GL E + G G +G ND G+RGP P+ HR+ F+LYA
Sbjct: 59 VIFNIPPDSTGLEENVP----DAGRLPDGSVQGYNDSGTLGYRGPCPPSGVHRYFFRLYA 114
Query: 151 LDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
LD + L +KE +LEA+EGHVLGEA L ++
Sbjct: 115 LDTVLDLEPGASKEDVLEAMEGHVLGEAKLIGLY 148
>sp|Q9Z729|Y877_CHLPN UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia
pneumoniae GN=CPn_0877 PE=3 SV=1
Length = 150
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 24 FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
+L+SP + +P+KYT +G G ISP L + +VP +SLAL+VED D P
Sbjct: 1 MQLLSPAFAYGAPIPKKYTCQGAG----ISPPLTFVDVPGAAQSLALIVEDPDVPKEIRS 56
Query: 84 IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHR 143
W HW+V N+ T+ L EG E ++ N K P + GP P+ HR
Sbjct: 57 DGLWIHWIVYNLSTTITNLAEG---------AEIFAVQGLNTSGK-PVYEGPCPPDKQHR 106
Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
+ F L+ALD + VT+++L EA+E H++ +A L +
Sbjct: 107 YFFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTY 147
>sp|Q9PLJ0|Y109_CHLMU UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=TC_0109 PE=3 SV=1
Length = 150
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 14/161 (8%)
Query: 24 FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
+L S ++ +P+KY+ +G G ISP L + ++P KSLAL+VED D P
Sbjct: 1 MQLTSQAFSYGRPIPKKYSCQGVG----ISPPLSFSDIPSEAKSLALIVEDPDVPANVRE 56
Query: 84 IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHR 143
W HW+V N+ P + L EG + ++ N ++ G+ P P+ HR
Sbjct: 57 DGLWIHWIVYNLSPIVSNLAEG---------AQIFAVQGINTAGEI-GYCPPCPPDAKHR 106
Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
+ F YALD + VTKE+LLEA+EGH+L A L +
Sbjct: 107 YYFYAYALDVVLPEEEGVTKEQLLEAMEGHILATAELMGTY 147
>sp|O84741|Y736_CHLTR UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=CT_736 PE=1 SV=1
Length = 150
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 24 FRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGP 83
+L S ++ +P+KY+ +G G ISP L + +VP KSL L+VED D P
Sbjct: 1 MQLTSQAFSYGRPIPKKYSCQGVG----ISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE 56
Query: 84 IVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHR 143
W HW+V N+ P + L EG + ++ N ++ G+ P P+ HR
Sbjct: 57 DGLWIHWIVYNLSPVVSNLAEG---------AQIFAVQGLNTAGEI-GYCPPCPPDAKHR 106
Query: 144 FQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
+ F YALD + VTKE+LLEA++GH++ A L +
Sbjct: 107 YYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTY 147
>sp|O67293|Y1250_AQUAE UPF0098 protein aq_1250 OS=Aquifex aeolicus (strain VF5) GN=aq_1250
PE=3 SV=1
Length = 171
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 17/151 (11%)
Query: 37 LPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIP 96
+P+ YT +G K+ISP + W +VPEGTKS L+++D DA PI +THWVV +IP
Sbjct: 32 IPKVYTCDG----KDISPHIGWEDVPEGTKSFVLIMDDPDA-----PIGTFTHWVVYDIP 82
Query: 97 PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HG-HRFQFKLYALDDE 154
+ L E F E +GIK+G ND+ G+ GP P HG HR+ FK++AL E
Sbjct: 83 SQTRELLEDFPKVP-----EVSGIKQGINDFGRVGYGGPCPPRGHGYHRYFFKVFALSVE 137
Query: 155 -MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
+ L +++ + + G +L +A + ++
Sbjct: 138 SLGLPPGASRKDVELKMNGKILAQAHIIGLY 168
>sp|O58984|Y1269_PYRHO UPF0098 protein PH1269 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1269
PE=3 SV=1
Length = 198
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 15/187 (8%)
Query: 1 MIPDQAAHNKFIAQASIAMASEEFRL-VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWY 59
+IP A + I E+ L VS + +P KYT EG +I+P L+
Sbjct: 21 LIPIVLATLVILGMGCIGGGEEKMSLKVSSVFGNNEFIPAKYTCEGV----DINPPLKIE 76
Query: 60 NVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAG 119
+ + KSL ++V+D DAP + +THW+ NIPP + +PEG K+ E+ +
Sbjct: 77 GLSDNVKSLVIIVDDPDAPMGT-----FTHWIAWNIPPVTE-IPEGIP-KQGEVD-KPIH 128
Query: 120 IKEGNNDWKVPGWRGPKLPN-HG-HRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGE 177
I +G ND+ G+ GP P HG H + FK+YALD ++L +++ L +A+EGHV+
Sbjct: 129 IIQGRNDFGRIGYNGPCPPRGHGVHHYHFKVYALDTTLNLKPGASRKELEKAMEGHVIQY 188
Query: 178 AVLTAIF 184
L ++
Sbjct: 189 GELVGLY 195
>sp|P12994|YBHB_ECOLI UPF0098 protein YbhB OS=Escherichia coli (strain K12) GN=ybhB PE=1
SV=2
Length = 158
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
Query: 24 FRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
+L+S ++ +LP ++ G G NISP L W +VP GTKS + D DAP SG
Sbjct: 1 MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG 60
Query: 83 PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP-NHG 141
W HWVVVN+P + LP+GF + G+ + D+ G+ G P
Sbjct: 61 ----WWHWVVVNLPADTRVLPQGFGSGLVAMPD---GVLQTRTDFGKTGYDGAAPPKGET 113
Query: 142 HRFQFKLYALDDE-MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
HR+ F ++ALD E + + + + + H L A +TA+F
Sbjct: 114 HRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMF 157
>sp|P77368|YBCL_ECOLI UPF0098 protein YbcL OS=Escherichia coli (strain K12) GN=ybcL PE=1
SV=1
Length = 183
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 9 NKFIAQASIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKK-NISPRLEWYNVPEGTKS 67
+ +A + + + F++ S EI +L + G G + N SP L W VPEGTKS
Sbjct: 7 STVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKS 66
Query: 68 LALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEY-AGIKEGNND 126
A+ V D DAP SG W HW VVNIP T+ LP +G+ + G + G +G ND
Sbjct: 67 FAVTVYDPDAPTGSG----WWHWTVVNIPATVTYLPVD-AGRRD--GTKLPTGAVQGRND 119
Query: 127 WKVPGWRGPKLP--NHGHRFQFKLYALDDE 154
+ G+ G P + H +QFK++AL E
Sbjct: 120 FGYAGFGGACPPKGDKPHHYQFKVWALKTE 149
>sp|Q9UZJ3|Y1153_PYRAB UPF0098 protein PYRAB11530 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB11530 PE=3 SV=2
Length = 178
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 14/150 (9%)
Query: 37 LPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIP 96
+P KYT EG +++P L + E KSL ++V+D DAP + +THW+ NIP
Sbjct: 38 IPAKYTCEG----IDVNPPLRIEGISENAKSLVIIVDDPDAP-----LGTFTHWIAWNIP 88
Query: 97 PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPN-HG-HRFQFKLYALDDE 154
P ++ +PEG K+ E+ I +G ND+ G+ GP P HG H + FK+Y LD
Sbjct: 89 P-VEEIPEGIP-KQGEVEKPIHMI-QGRNDFGRIGYNGPCPPRGHGVHHYHFKVYVLDTT 145
Query: 155 MHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
++L T+E L +A+EGH++ L ++
Sbjct: 146 LNLRPGATREELEKAMEGHIIQFGELVGLY 175
>sp|O28575|Y1698_ARCFU UPF0098 protein AF_1698 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1698 PE=3 SV=1
Length = 287
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 15/149 (10%)
Query: 27 VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVP 86
V + G++P KYT +G+ +ISP L + E KSL ++ ED P P+
Sbjct: 141 VKSAFENGGKIPAKYTCDGE----DISPPLYIEGLREDVKSLVIICED-----PDAPMGV 191
Query: 87 WTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQF 146
+THW+ N+ PT + +PE K + + + + +G ND+ G+ GP P+ HR+ F
Sbjct: 192 FTHWIAWNVEPTSE-IPENVP-KTKFV--DEPKMVQGRNDFGKVGYNGPCPPSGEHRYYF 247
Query: 147 KLYALDDEMHLGNKVTKERLLEAIEGHVL 175
++YA+D L +++ LL AIEGH+L
Sbjct: 248 RIYAID--TLLQGDYSRQELLRAIEGHIL 274
>sp|P55185|YXKA_BACSU Uncharacterized protein YxkA OS=Bacillus subtilis (strain 168)
GN=yxkA PE=4 SV=2
Length = 168
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 40 KYTNEGQGAKKN--ISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPP 97
KY +E + N +S + + ++P G K+LAL D DA G W HW NIP
Sbjct: 17 KYADEKYKREGNPFVSFPIHFDDIPSGAKTLALTFIDHDAIPVCG--FSWIHWTAANIPA 74
Query: 98 TLKGLPEGFSGKEEEI----GGEYAGIKEGNNDWKV-PGWRGPKLPNHGHRFQFKLYALD 152
+ LPE S + +++ +A G+ND KV + GP P+ H + +YALD
Sbjct: 75 YIGELPEHASEERQDLMIQGQNSFASPLAGSNDPKVIHQYCGPTPPDKDHAYTLTVYALD 134
Query: 153 DEMHLGNKVTKERLLEAIEGHVLGEAVL 180
E++L L + ++ H+L E +
Sbjct: 135 AELNLQPGFYLNELYQEMKEHILAETSI 162
>sp|Q9X9Z8|Y1794_STRCO UPF0098 protein SCO1794 OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=SCO1794 PE=3 SV=1
Length = 179
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 23 EFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSG 82
F + S ++ G L ++ A N SP L W P TKS A+ D DAP SG
Sbjct: 19 SFTVTSEDVPEGGTL----KDDQVHAAGNTSPHLRWEGFPAETKSFAVTCYDPDAPTGSG 74
Query: 83 PIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP--NH 140
+ HWVV +IP ++ LP G E G G + ND+ G+ G P +
Sbjct: 75 ----FWHWVVFDIPASVTELPVGAGSGAFE--GLPQGAVQARNDYGSKGFGGAAPPPGDG 128
Query: 141 GHRFQFKLYALDDE 154
HR+ F +YA+D E
Sbjct: 129 PHRYVFTVYAVDQE 142
>sp|P67227|Y2164_MYCBO UPF0098 protein Mb2164c OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=Mb2164c PE=3 SV=1
Length = 176
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 23 EFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
F L S I L + GA + SP+L W P T+S A+ V D DAP S
Sbjct: 16 SFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLS 75
Query: 82 GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHG 141
G + HW V N+P + LPEG E GG + + V G P P HG
Sbjct: 76 G----FWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYV-GAAPP--PGHG 128
Query: 142 -HRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
HR+ ++A+ +++ L + L + H + AV+ +
Sbjct: 129 VHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTY 173
>sp|P67226|Y2140_MYCTU UPF0098 protein Rv2140c/MT2198 OS=Mycobacterium tuberculosis
GN=Rv2140c PE=3 SV=1
Length = 176
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 23 EFRLVSPEINHQGRLPRKYTNEGQGAK-KNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
F L S I L + GA + SP+L W P T+S A+ V D DAP S
Sbjct: 16 SFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLS 75
Query: 82 GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHG 141
G + HW V N+P + LPEG E GG + + V G P P HG
Sbjct: 76 G----FWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYV-GAAPP--PGHG 128
Query: 142 -HRFQFKLYALD-DEMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184
HR+ ++A+ +++ L + L + H + AV+ +
Sbjct: 129 VHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTY 173
>sp|P67223|Y1945_MYCBO UPF0098 protein Mb1945c OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=Mb1945c PE=3 SV=1
Length = 201
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 22 EEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
+ + SP +P +YT +G NI+P L W + P G ALVV+D DAP
Sbjct: 58 DVLTISSPAFADGAPIPEQYTCKG----ANIAPPLTW-SAPFGG---ALVVDDPDAPR-- 107
Query: 82 GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP--N 139
P+ HW+V+ I P G + E GG GI N+ + P + GP P
Sbjct: 108 ---EPYVHWIVIGIAPG-----AGSTADGETPGG---GISLPNSSGQ-PAYTGPCPPAGT 155
Query: 140 HGHRFQFKLYAL 151
H ++F LY L
Sbjct: 156 GTHHYRFTLYHL 167
>sp|P67222|Y1910_MYCTU UPF0098 protein Rv1910c/MT1961 OS=Mycobacterium tuberculosis
GN=Rv1910c PE=3 SV=1
Length = 201
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 22 EEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPS 81
+ + SP +P +YT +G NI+P L W + P G ALVV+D DAP
Sbjct: 58 DVLTISSPAFADGAPIPEQYTCKG----ANIAPPLTW-SAPFGG---ALVVDDPDAPR-- 107
Query: 82 GPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLP--N 139
P+ HW+V+ I P G + E GG GI N+ + P + GP P
Sbjct: 108 ---EPYVHWIVIGIAPG-----AGSTADGETPGG---GISLPNSSGQ-PAYTGPCPPAGT 155
Query: 140 HGHRFQFKLYAL 151
H ++F LY L
Sbjct: 156 GTHHYRFTLYHL 167
>sp|P67225|Y1946_MYCBO UPF0098 protein Mb1946c OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=Mb1946c PE=3 SV=1
Length = 205
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 18 AMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDA 77
A A+E + SP +P +++ +G N++P L W + P G LALVV+D
Sbjct: 54 APAAEPLTIASPMFADGAPIPVQFSCKG----ANVAPPLTWSS-PAGAAELALVVDD--- 105
Query: 78 PDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKL 137
PD G + + HW+V I P SG + G AG N G+ GP
Sbjct: 106 PDAVGGL--YVHWIVTGIAPG--------SGSTAD-GQTPAGGHSVPNSGGRQGYFGPCP 154
Query: 138 P--NHGHRFQFKLYALDDEMHL 157
P H ++F LY L + L
Sbjct: 155 PAGTGTHHYRFTLYHLPVALQL 176
>sp|P67224|Y1911_MYCTU UPF0098 protein Rv1911c/MT1962 OS=Mycobacterium tuberculosis
GN=Rv1911c PE=3 SV=1
Length = 205
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 18 AMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDA 77
A A+E + SP +P +++ +G N++P L W + P G LALVV+D
Sbjct: 54 APAAEPLTIASPMFADGAPIPVQFSCKG----ANVAPPLTWSS-PAGAAELALVVDD--- 105
Query: 78 PDPSGPIVPWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKL 137
PD G + + HW+V I P SG + G AG N G+ GP
Sbjct: 106 PDAVGGL--YVHWIVTGIAPG--------SGSTAD-GQTPAGGHSVPNSGGRQGYFGPCP 154
Query: 138 P--NHGHRFQFKLYALDDEMHL 157
P H ++F LY L + L
Sbjct: 155 PAGTGTHHYRFTLYHLPVALQL 176
>sp|P54185|OBA5_DROME Putative odorant-binding protein A5 OS=Drosophila melanogaster
GN=a5 PE=2 SV=2
Length = 210
Score = 37.4 bits (85), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 52 ISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIV-PWTHWVVVNIP--PTLKGLP 103
PRL+W PE ++ ++ D AP+ P+ W HW+VVN+P +KG P
Sbjct: 71 FQPRLDWNADPESFYTVLMICPD--APNRENPMYRSWLHWLVVNVPGLDIMKGQP 123
>sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2
Length = 197
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 27/121 (22%)
Query: 69 ALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDW 127
LV+ D DAP P+ W HW+++NI G + + +Y G
Sbjct: 93 TLVMTDPDAPSRKNPVFREWHHWLIINI--------SGQNVSSGTVLSDYIG-------- 136
Query: 128 KVPGWRGPKLPNHGHRFQFKLY----ALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAI 183
GP+ HR+ F +Y ++ D H GN+ ++++ H LG V
Sbjct: 137 -----SGPRKGTGLHRYVFLVYKQPGSITDTQHGGNR-RNFKVMDFANKHHLGNPVAGNF 190
Query: 184 F 184
F
Sbjct: 191 F 191
>sp|Q6FJV0|GLGB_CANGA 1,4-alpha-glucan-branching enzyme OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GLC3 PE=3 SV=1
Length = 706
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 16 SIAMASEEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDI 75
S A +F LV ++ L ++ NE A +N + +W N P+ SL V+ +
Sbjct: 566 SYHYARRQFNLVDDDL-----LRYRHLNEFDAAMQNCESKHQWLNTPQAYVSLKHEVDKV 620
Query: 76 DAPDPSGPIVPWTHWVVVNIPPT 98
A + +G H V N PT
Sbjct: 621 IAFERNG------HLFVFNFHPT 637
>sp|Q9XFK7|MFT_ARATH Protein MOTHER of FT and TF 1 OS=Arabidopsis thaliana GN=MFT PE=1
SV=1
Length = 173
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 69 ALVVEDIDAPDPSGP-IVPWTHWVVVNIP 96
LV+ D DAP PS P + W HW+VV+IP
Sbjct: 64 TLVMTDPDAPSPSEPNMREWVHWIVVDIP 92
>sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1
Length = 152
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 69 ALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDW 127
LV+ D DAP P+ W HW+++NI G + + +Y G
Sbjct: 48 TLVMTDPDAPSRKNPVFREWHHWLIINI--------SGQNVSSGTVLSDYIG-------- 91
Query: 128 KVPGWRGPKLPNHGHRFQFKLY----ALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAI 183
GP HR+ F +Y ++ D H GN+ ++++ H LG V
Sbjct: 92 -----SGPPKGTGLHRYVFLVYKQPGSITDTQHGGNR-PNFKVMDFANKHHLGNPVAGNF 145
Query: 184 F 184
F
Sbjct: 146 F 146
>sp|A7KAM6|ATG17_PENCW Autophagy-related protein 17 OS=Penicillium chrysogenum (strain
ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg17 PE=3
SV=1
Length = 554
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Query: 82 GPIVPWTHWVVVNIPPT-----------LKGLPEGFSGKEEEIGGEYAG-IKEGNNDWKV 129
G +P W V + P L G P G EE GGEYAG K G +D
Sbjct: 462 GDFLPSDIWPGVGLAPMQVQFTRLSGGQLDGGPIGQKPLEEPSGGEYAGAAKAGVSDGSA 521
Query: 130 PGWRGPKLPNH 140
G + P LP H
Sbjct: 522 EGEQIPDLPRH 532
>sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT
PE=3 SV=1
Length = 177
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 68 LALVVEDIDAPDPSGPIV-PWTHWVVVNIPPT 98
L++ D DAP PS P + + HW+V +IP T
Sbjct: 65 FTLIMMDPDAPSPSNPYMREYLHWMVTDIPGT 96
>sp|P54188|D3_ONCVO Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1
Length = 134
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 29/140 (20%)
Query: 50 KNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSG 108
KN ++ W P LV+ D DAP P+ W HW+++NI G +
Sbjct: 13 KNQPTKVSWDAEPGAL--YTLVMTDPDAPSRKNPVFREWHHWLIINI--------SGQNV 62
Query: 109 KEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLY----ALDDEMHLGNKVTKE 164
+ +Y G + +G L HR+ F +Y ++ D H GN+
Sbjct: 63 SSGTVLSDYIGSGQP---------KGTGL----HRYVFLVYKQPGSITDTQHGGNR-PNF 108
Query: 165 RLLEAIEGHVLGEAVLTAIF 184
++++ H LG V F
Sbjct: 109 KVMDFANKHHLGNPVAGNFF 128
>sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=3 SV=1
Length = 114
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 27/121 (22%)
Query: 69 ALVVEDIDAPDPSGPIV-PWTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNNDW 127
LV+ D D P P+ W HW+++NI G + + +Y G
Sbjct: 10 TLVMTDPDVPSRKNPVFREWHHWLIINI--------SGQNVSSGTVLSDYIG-------- 53
Query: 128 KVPGWRGPKLPNHGHRFQFKLY----ALDDEMHLGNKVTKERLLEAIEGHVLGEAVLTAI 183
GP HR+ F +Y ++ D H GN+ ++++ H LG V
Sbjct: 54 -----SGPPKGTGLHRYVFLVYKQPGSITDTQHGGNR-RNFKVMDFANKHHLGNPVAGNF 107
Query: 184 F 184
F
Sbjct: 108 F 108
>sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A
PE=1 SV=1
Length = 179
Score = 30.8 bits (68), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 69 ALVVEDIDAPDPSGP-IVPWTHWVVVNIPPT 98
LV+ D DAP PS P + + HW+V +IP T
Sbjct: 68 TLVMVDPDAPSPSDPNLREYLHWLVTDIPGT 98
>sp|Q8VWH2|HD3B_ORYSJ Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B
PE=2 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 69 ALVVEDIDAPDPSGP-IVPWTHWVVVNIPPT 98
LV+ D DAP PS P + + HW+V +IP T
Sbjct: 67 TLVMVDPDAPSPSNPNLREYLHWLVTDIPGT 97
>sp|Q9D9G2|PEBP4_MOUSE Phosphatidylethanolamine-binding protein 4 OS=Mus musculus GN=Pebp4
PE=2 SV=1
Length = 242
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 53 SPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVP-WTHWVVVNI 95
+P ++++ +G L LV+ D DAP S P++ W HW+V NI
Sbjct: 98 APIVKFHTALDGALYL-LVMVDPDAPSRSNPVMKYWRHWLVSNI 140
>sp|A6Q6B4|RF1_SULNB Peptide chain release factor 1 OS=Sulfurovum sp. (strain NBC37-1)
GN=prfA PE=3 SV=1
Length = 355
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 110 EEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGN 159
+E G + G+ K+ + P+ HR LYALDD M+ GN
Sbjct: 284 DETAGQRKLQVGSGDRSEKIRTYNYPQNRLTDHRIGLTLYALDDVMNNGN 333
>sp|Q9U3X4|DHSA_DICDI Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
mitochondrial OS=Dictyostelium discoideum GN=sdhA PE=3
SV=1
Length = 626
Score = 30.4 bits (67), Expect = 7.4, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 51 NISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG-LPEGFSGK 109
++SP + +P G + A++ +D P++P H+ + IP KG + GK
Sbjct: 348 HLSPEIIDERLP-GIRETAMIFAGVDVTKEPIPVIPTVHYNMGGIPTNYKGQVITQVDGK 406
Query: 110 EEEIGGEYAG 119
++ + G YA
Sbjct: 407 DKLVKGLYAA 416
>sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1
Length = 177
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 68 LALVVEDIDAPDPSGPIVP-WTHWVVVNIPPTLKGLPEGFSGKE 110
LV+ D D P PS P + HW+V NIP G + GKE
Sbjct: 68 FTLVMIDPDVPGPSDPFLKEHLHWIVTNIP----GTTDATFGKE 107
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,915,707
Number of Sequences: 539616
Number of extensions: 3714124
Number of successful extensions: 5715
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 5662
Number of HSP's gapped (non-prelim): 57
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)