Query 029999
Match_columns 184
No_of_seqs 148 out of 1271
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 10:54:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n08_A Putative phosphatidylet 100.0 6.8E-54 2.3E-58 335.0 18.8 149 22-184 2-150 (153)
2 1fjj_A Hypothetical 17.1 kDa p 100.0 4.4E-51 1.5E-55 321.0 17.8 155 23-184 1-158 (159)
3 1fux_A Hypothetical 19.5 kDa p 100.0 5.6E-50 1.9E-54 316.7 17.0 156 23-184 2-161 (166)
4 2evv_A Hypothetical protein HP 100.0 2.6E-45 8.8E-50 298.7 11.2 151 17-184 19-199 (207)
5 1wpx_B Carboxypeptidase Y inhi 100.0 2.3E-30 7.7E-35 212.4 8.5 125 23-158 36-178 (220)
6 2iqy_A Phosphatidylethanolamin 99.9 3.1E-28 1.1E-32 195.9 9.9 105 22-158 26-137 (190)
7 2jyz_A CG7054-PA, GH14779P, PE 99.9 2.1E-28 7.1E-33 195.2 8.8 105 23-156 16-126 (179)
8 3axy_A Protein heading DATE 3A 99.9 6.1E-28 2.1E-32 191.1 9.1 107 23-160 31-138 (170)
9 1wko_A Terminal flower 1 prote 99.9 7.8E-27 2.7E-31 186.3 9.1 102 27-159 39-141 (180)
10 2gzq_A Phosphatidylethanolamin 99.9 3.1E-25 1E-29 179.7 8.8 102 30-157 48-155 (200)
No 1
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=100.00 E-value=6.8e-54 Score=335.02 Aligned_cols=149 Identities=36% Similarity=0.590 Sum_probs=140.2
Q ss_pred CccEEEcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999 22 EEFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG 101 (184)
Q Consensus 22 ~~~~l~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~ 101 (184)
..|+|+|++|.+|+.||.+|+|+| +|+||+|+|+++|++||||+|+|+|||||++..+.++|+||+|||||+++++
T Consensus 2 ~~~~l~S~~f~~g~~ip~~~t~~G----~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~~~~~~HWvv~nIp~~~~~ 77 (153)
T 3n08_A 2 NAMQLTSQAFSYGRPIPKKYSCQG----VGISPPLSFSDVPREAKSLVLIVEDPDVPPSVREDGLWIHWIVYNLSPVVSN 77 (153)
T ss_dssp CCCEEEBTTBCTTEECCGGGSTTS----CCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCTTSCEEEEEEEEECTTCCE
T ss_pred CcEEEECCCcCCCCCCCHHHcCCC----CCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCCCCcEEEEEEEcCCCCccc
Confidence 469999999999999999999988 5899999999999999999999999999987666678999999999999889
Q ss_pred CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCCcccHHHHHHHHhcCeeEEEEEE
Q 029999 102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNKVTKERLLEAIEGHVLGEAVLT 181 (184)
Q Consensus 102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~~~~~~~l~~a~~~hvl~~~~l~ 181 (184)
|++|.. .+.+||.|+++..+|.|||||.|.|||+|+||||+.+|+|++++++++|.++|++|+|++|+|+
T Consensus 78 l~~g~~----------~g~~~g~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~~~~~~~~l~~a~~ghvl~~a~l~ 147 (153)
T 3n08_A 78 LAEGAQ----------IFAVQGLNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELM 147 (153)
T ss_dssp ECTTCC----------CSSEECBCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCCSSCCHHHHHHHHTTTEEEEEEEE
T ss_pred ccCCCC----------CCceEeecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCCCCCCHHHHHHHhhhCeEEEEEEE
Confidence 999862 3578999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEC
Q 029999 182 AIF 184 (184)
Q Consensus 182 g~y 184 (184)
|+|
T Consensus 148 g~y 150 (153)
T 3n08_A 148 GTY 150 (153)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 2
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*
Probab=100.00 E-value=4.4e-51 Score=321.01 Aligned_cols=155 Identities=34% Similarity=0.595 Sum_probs=138.1
Q ss_pred ccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999 23 EFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG 101 (184)
Q Consensus 23 ~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~ 101 (184)
.|+|+|++|.+|+.||.+|++.+.+| |+|+||+|+|+++|++||||+|+|+|||||++. +|+||+|+|||+++++
T Consensus 1 ~~~l~S~~f~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~~----~~~HW~v~nIp~~~~~ 76 (159)
T 1fjj_A 1 AMKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS----GWWHWVVVNLPADTRV 76 (159)
T ss_dssp CCEEECSSCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT----CEEEEEEEEEETTCCE
T ss_pred CeEEEccCcCCcCCCChhHhccccccCCCCcCCeEEEcCCCCCCeEEEEEEECCCCCCCC----cEEEEEEEccCCCccc
Confidence 48999999999999999966554443 479999999999999999999999999999753 5999999999999889
Q ss_pred CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC-CceEEEEEEeeCC-cCCCCCcccHHHHHHHHhcCeeEEEE
Q 029999 102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH-GHRFQFKLYALDD-EMHLGNKVTKERLLEAIEGHVLGEAV 179 (184)
Q Consensus 102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g-~HrY~f~vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~~ 179 (184)
|++|...... ..+.|.+||.|+++..+|.|||||.| .|||+|+||||+. +|+|++++++++|.++|++|+|++|+
T Consensus 77 l~~g~~~~~~---~~~~g~~~g~n~~g~~~Y~GP~PP~g~~HRY~F~lyald~~~l~l~~~~~~~~l~~a~~ghvl~~a~ 153 (159)
T 1fjj_A 77 LPQGFGSGLV---AMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASAS 153 (159)
T ss_dssp ECTTGGGTSS---CCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCCTTCCHHHHHHHHHHHEEEEEE
T ss_pred cCCCcccccc---cCCCCcEEeecCCCCCcccCCCCcCCCceEEEEEEEEccCcccCCCCCCCHHHHHHHhhhceEEEEE
Confidence 9998753211 12457899999999999999999999 6999999999996 79999999999999999999999999
Q ss_pred EEEEC
Q 029999 180 LTAIF 184 (184)
Q Consensus 180 l~g~y 184 (184)
|+|+|
T Consensus 154 l~g~y 158 (159)
T 1fjj_A 154 ITAMF 158 (159)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99998
No 3
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2
Probab=100.00 E-value=5.6e-50 Score=316.71 Aligned_cols=156 Identities=34% Similarity=0.567 Sum_probs=137.4
Q ss_pred ccEEEcCCCCCCCCCCcccccCCCCC-CCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCCcceEEEEEEccCCCCCC
Q 029999 23 EFRLVSPEINHQGRLPRKYTNEGQGA-KKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPIVPWTHWVVVNIPPTLKG 101 (184)
Q Consensus 23 ~~~l~S~~f~~g~~lp~~~t~~g~g~-~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~~~~~HW~v~nIp~~~~~ 101 (184)
+|+|+|++|.+|+.||.+|++++.+| |+|+||+|+|+++|++||||+|+|+|||||++. +|+||+|+|||+++++
T Consensus 2 ~~~l~S~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~~----~~~HW~v~nIp~~~~~ 77 (166)
T 1fux_A 2 EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS----GWWHWTVVNIPATVTY 77 (166)
T ss_dssp CCEEECSSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT----CEEEEEEEEEETTCCE
T ss_pred ceEEeccCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCCC----cEEEeEEeCcCCCccc
Confidence 59999999999999999775443333 469999999999999999999999999999753 6999999999999889
Q ss_pred CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCC-cCCCCCcccHHHHHHHHhcCeeEEE
Q 029999 102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDD-EMHLGNKVTKERLLEAIEGHVLGEA 178 (184)
Q Consensus 102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~ 178 (184)
|++|...... ...+.|.+||.|+++..+|.|||||.| .|||+|+||||+. +|+|++++++++|.++|++|+|++|
T Consensus 78 l~~g~~~~~~--~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~~~~~~~~l~~a~~ghvl~~a 155 (166)
T 1fux_A 78 LPVDAGRRDG--TKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATA 155 (166)
T ss_dssp ECTTTTCTTC--TTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCCTTCCHHHHHHHHHTTEEEEE
T ss_pred ccCCcccccc--ccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCCCCCCHHHHHHHhhcCeEEEE
Confidence 9999754210 012457899999999999999999987 6999999999996 7999999999999999999999999
Q ss_pred EEEEEC
Q 029999 179 VLTAIF 184 (184)
Q Consensus 179 ~l~g~y 184 (184)
+|+|+|
T Consensus 156 ~l~g~y 161 (166)
T 1fux_A 156 EITPVY 161 (166)
T ss_dssp EECCEE
T ss_pred EEEEEE
Confidence 999987
No 4
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}
Probab=100.00 E-value=2.6e-45 Score=298.70 Aligned_cols=151 Identities=26% Similarity=0.432 Sum_probs=130.1
Q ss_pred hhccCCccEEEcCCCCCCCCCCcccccC-CCCCCCCCcC---------eeEeccCCCCceEEEEEEecCCCCCCCCCCcc
Q 029999 17 IAMASEEFRLVSPEINHQGRLPRKYTNE-GQGAKKNISP---------RLEWYNVPEGTKSLALVVEDIDAPDPSGPIVP 86 (184)
Q Consensus 17 ~~~~~~~~~l~S~~f~~g~~lp~~~t~~-g~g~~~n~sP---------~l~w~~~P~~tks~alim~DpDaP~~~~p~~~ 86 (184)
+....+.|+|+|+ |.+|+.||++|+|+ |. |+|| +|+|+++ ++||||||+|+|||||++.+ ++
T Consensus 19 ~~~~~~~~~lss~-f~~g~~ip~~y~~~~G~----~~sP~~~~p~~Sp~L~W~~~-~gtks~aLvm~DPDAP~~~g--~~ 90 (207)
T 2evv_A 19 FQGHMKTFEVMIQ-TDSKGYLDAKFGGNAPK----AFLNSNGLPTYSPKISWQKV-EGAQSYALELIDHDAQKVCG--MP 90 (207)
T ss_dssp ----CEECCEECC-CCTTSBCCGGGSTTSCG----GGBCTTSCBCCCCCEEECCC-TTCSEEEEEEEETTHHHHHS--SC
T ss_pred ccCCCcceEEecC-CCCcCCCChhhcccCCC----CcCCccCCCCccceEEEecC-CCCeEEEEEEECCCCCCCCC--Cc
Confidence 3334457999987 99999999999998 64 5555 8999999 89999999999999997532 57
Q ss_pred eEEEEEEccCCCCCCCCCCCCCCcccccCcccCeeeecCC----CCC---------------CCccCCCCCCCCceEEEE
Q 029999 87 WTHWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNND----WKV---------------PGWRGPKLPNHGHRFQFK 147 (184)
Q Consensus 87 ~~HW~v~nIp~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~----~g~---------------~~Y~GP~Pp~g~HrY~f~ 147 (184)
|+||+|+|| ..++|++|+.. .+.+++||.|+ ++. .+|.|||||.|.|||+|+
T Consensus 91 ~~HWvv~NI--~~~~l~eg~~~-------~~~g~~qG~N~~~~~~g~~~~~~~~k~~~~~~~~~Y~GP~PP~G~HRYvF~ 161 (207)
T 2evv_A 91 FVHWVVGNI--AHNVLEENASM-------MDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQ 161 (207)
T ss_dssp EEEEEEEEE--CSSEECTTHHH-------HCSSSEECCCTTCSCSTTCSSCHHHHHHHHHHTCSCCCCCCSSSCEEEEEE
T ss_pred EEEEEEeCC--CCCccccCccc-------CCCCceecccccccccccccccccccccccccccccCCCCCCCCcEEEEEE
Confidence 999999999 45689998642 12468999999 887 899999999999999999
Q ss_pred EEeeCC-cCCCCCcccHHHHHHHHhcCeeEEEEEEEEC
Q 029999 148 LYALDD-EMHLGNKVTKERLLEAIEGHVLGEAVLTAIF 184 (184)
Q Consensus 148 vyAl~~-~l~l~~~~~~~~l~~a~~~hvl~~~~l~g~y 184 (184)
||||+. +|+|++++++++|.++|++|||++|+|+|+|
T Consensus 162 vyALd~~~L~l~~~~~~~~l~~am~gHvLa~a~l~g~y 199 (207)
T 2evv_A 162 VYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLY 199 (207)
T ss_dssp EEEESSSCCCCCSSCCHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EEEecCccCCCCCCCCHHHHHHHhhcCeEEEEEEEEEE
Confidence 999996 9999999999999999999999999999997
No 5
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1
Probab=99.96 E-value=2.3e-30 Score=212.38 Aligned_cols=125 Identities=18% Similarity=0.205 Sum_probs=96.3
Q ss_pred ccEEEcCC---CCCCCCCCcccccCCCCCCCCCcCe----------eEeccCCCCceEEEEEEecCCCCCCCCCC-cceE
Q 029999 23 EFRLVSPE---INHQGRLPRKYTNEGQGAKKNISPR----------LEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWT 88 (184)
Q Consensus 23 ~~~l~S~~---f~~g~~lp~~~t~~g~g~~~n~sP~----------l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~ 88 (184)
.|+|+.+. +.+|..|+.+++|.+. +++.. ..|+++|+++++|+|+|+|||||++.++. ++|+
T Consensus 36 ~L~V~y~~~~~v~~G~~l~~~~t~~~P----~v~~~~~~~~~~~~~~~~~~~p~~~~~~~lvm~DpDaP~~~~p~~~~~~ 111 (220)
T 1wpx_B 36 ILAVEYSSSAPVAMGNTLPTEKARSKP----QFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFC 111 (220)
T ss_dssp EEEEEEETTEEECSSCBCCGGGGSSCC----EEEEEEETTCC------CCCCCCSSCCEEEEEEESSSSCSSCCTTCSEE
T ss_pred EEEEEECCCcEeCCCCCcCHHHhcCCC----eeEeCCCCCcccccccccccCCCCCceEEEEEECCCCCCCCCCCcCcEE
Confidence 68898877 7899999999999863 44444 47999999999999999999999987666 7899
Q ss_pred EEEEEccCCCCCCCCCCCCCCcccccCcccCeeeecCC--CCCCCccCCCCCCC--CceEEEEEEeeCCcCCCC
Q 029999 89 HWVVVNIPPTLKGLPEGFSGKEEEIGGEYAGIKEGNND--WKVPGWRGPKLPNH--GHRFQFKLYALDDEMHLG 158 (184)
Q Consensus 89 HW~v~nIp~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~--~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~ 158 (184)
||+++|||++.++|++|.... +.|.+++.|+ .+..+|.|||||.| .|||+|+||||+.+|+++
T Consensus 112 HW~v~nIp~~~~~l~~~~~~~-------~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~lya~~~~l~~~ 178 (220)
T 1wpx_B 112 HLVECDLKLLNEATHETSGAT-------EFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSS 178 (220)
T ss_dssp EEEEEEEEECC---------C-------CEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEECCTTCCGG
T ss_pred EEEEEccCCCccccccccCCC-------CccceEeecCCccccccccCCCCccCCCCceEEEEEEecCCcCCcc
Confidence 999999999998998875321 2356777664 46789999999976 699999999999887643
No 6
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A
Probab=99.95 E-value=3.1e-28 Score=195.88 Aligned_cols=105 Identities=23% Similarity=0.434 Sum_probs=90.5
Q ss_pred CccEEEc---CCCCCCCCCCcccccCCCCCCCCCcCe-eEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccC
Q 029999 22 EEFRLVS---PEINHQGRLPRKYTNEGQGAKKNISPR-LEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIP 96 (184)
Q Consensus 22 ~~~~l~S---~~f~~g~~lp~~~t~~g~g~~~n~sP~-l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp 96 (184)
..|+|++ ..|.+|+.|+.+++|++ |+ |+|++.|++ ++|+|+|+|||||++.+|. ++|+||+++|||
T Consensus 26 ~~l~v~~~~~~~v~~G~~l~~~~~~~~--------P~~l~~~~~~~~-~~ytlvm~DpDaP~~~~p~~~~~~HWlv~nIp 96 (190)
T 2iqy_A 26 HALRVDYGGVTVDELGKVLTPTQVMNR--------PSSISWDGLDPG-KLYTLVLTDPDAPSRKDPKFREWHHFLVVNMK 96 (190)
T ss_dssp EECEEECSSCBCCSTTEECCGGGGSSC--------CSEEECTTCCTT-SEEEEEEEESSSSCSSSCTTCCEEEEEEEEEE
T ss_pred ceEEEEECCCcccCCCCEECHHHHhCC--------CceEEEccCCCC-CEEEEEEECCCCCCCCCCCcCCEEEEEEeCCC
Confidence 3799999 67999999999999864 99 999999977 9999999999999988777 689999999999
Q ss_pred CCCCCCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCCCC
Q 029999 97 PTLKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMHLG 158 (184)
Q Consensus 97 ~~~~~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~l~ 158 (184)
++ .|++|. ...+|.|||||.| .|||+|+||||+.+|+++
T Consensus 97 ~~--~~~~G~---------------------~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~ 137 (190)
T 2iqy_A 97 GN--DISSGT---------------------VLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCD 137 (190)
T ss_dssp TT--BGGGSE---------------------EEECCCCCCCCTTSCCEEEEEEEEECSSCCCCC
T ss_pred hh--ccccCc---------------------cccceeCCCCcCCCCceEEEEEEEEeCCccCcc
Confidence 86 454431 1468999999976 699999999999887664
No 7
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}
Probab=99.95 E-value=2.1e-28 Score=195.16 Aligned_cols=105 Identities=25% Similarity=0.502 Sum_probs=91.0
Q ss_pred ccEEEcC---CCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCC
Q 029999 23 EFRLVSP---EINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPT 98 (184)
Q Consensus 23 ~~~l~S~---~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~ 98 (184)
.|+|+++ .+.+|..|+.++++. +|+|+|++.|++|++|+|+|+|||||++.++. ++|+||+++|||++
T Consensus 16 ~l~V~y~~~~~v~~G~~l~~~~~~~--------~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HWlv~nIp~~ 87 (179)
T 2jyz_A 16 TIKVIYGDDLEVKQGNELTPTQVKD--------QPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHWSVVNIPGS 87 (179)
T ss_dssp ECEEESSSSCCBCTTEECCSSCTTS--------CCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCCEEECCCTT
T ss_pred eEEEEECCCcccCCCCEeCHHHhcc--------CCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEEEEECCCCC
Confidence 7999985 588999999988753 69999999999999999999999999987776 78999999999998
Q ss_pred CCCCCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEEeeCCcCC
Q 029999 99 LKGLPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLYALDDEMH 156 (184)
Q Consensus 99 ~~~l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vyAl~~~l~ 156 (184)
.+.|++|. ...+|.|||||.| .|||+|+||||+++|+
T Consensus 88 ~~~l~~g~---------------------~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~ 126 (179)
T 2jyz_A 88 NENPSGGH---------------------SLADYVGSGPPKDTGLHRYIFLLYRQENKIE 126 (179)
T ss_dssp SSSTTSSE---------------------EEECCCSCCSCGGGCSEEEEEEEEEECSCCC
T ss_pred ccccCccc---------------------ccccccCCCCCCCCCceEEEEEEEEcCCcCC
Confidence 76665542 1368999999975 6999999999998776
No 8
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A
Probab=99.95 E-value=6.1e-28 Score=191.09 Aligned_cols=107 Identities=25% Similarity=0.337 Sum_probs=87.9
Q ss_pred ccEEEcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCC
Q 029999 23 EFRLVSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKG 101 (184)
Q Consensus 23 ~~~l~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~ 101 (184)
.++..|..+.+|+.|+.+++ +.+|+|+|++.|+ +++|+|+|+|||||++.++. ++|+||+++|||++.+.
T Consensus 31 ~v~y~s~~v~~G~~l~~~~~--------~~~P~l~~~~~~~-~~~ytlvm~DpDaP~~~~p~~~~~~HWlv~nIp~~~~~ 101 (170)
T 3axy_A 31 KVTYGSKTVSNGLELKPSMV--------THQPRVEVGGNDM-RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAA 101 (170)
T ss_dssp EEEETTEECCTTEECCGGGS--------SSCCEEEECCSCT-TCEEEEEEEETTCSCTTSCTTCSEEEEEEEEEETTSBG
T ss_pred EEEECCeEcCCCCEeCHHHh--------CcCCeEEEeCCCC-CcEEEEEEECCCCCCCccCCCccEEEEEEeCCCCCccc
Confidence 34445677899999999886 5799999999986 59999999999999987776 68999999999986421
Q ss_pred CCCCCCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCCc
Q 029999 102 LPEGFSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGNK 160 (184)
Q Consensus 102 l~~g~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~~ 160 (184)
.. |. ...+|.|||||.|.|||+|+||||+.++++++.
T Consensus 102 -~~--------------G~-------~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~~p 138 (170)
T 3axy_A 102 -SF--------------GQ-------EVMSYESPRPTMGIHRLVFVLFQQLGRQTVYAP 138 (170)
T ss_dssp -GG--------------SE-------EEECCCCCCCCSSCEEEEEEEEECSSCCCCCCC
T ss_pred -cC--------------Cc-------eeceecCCCCCCCcEEEEEEEEecCCccCCCCc
Confidence 00 10 146899999999999999999999998877643
No 9
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A
Probab=99.94 E-value=7.8e-27 Score=186.28 Aligned_cols=102 Identities=26% Similarity=0.360 Sum_probs=84.9
Q ss_pred EcCCCCCCCCCCcccccCCCCCCCCCcCeeEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCC
Q 029999 27 VSPEINHQGRLPRKYTNEGQGAKKNISPRLEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEG 105 (184)
Q Consensus 27 ~S~~f~~g~~lp~~~t~~g~g~~~n~sP~l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g 105 (184)
.|..+.+|..|+.+.+. .+|+|+|++.|+++ +|+|+|+|||||++.+|. ++|+||+++|||++... ..
T Consensus 39 ~s~~v~~G~~l~~~~~~--------~~P~l~~~~~~~~~-~ytlvm~DPDaP~~~~p~~~~~~HWlv~nIp~~~~~-~~- 107 (180)
T 1wko_A 39 NKKQVSNGHELFPSSVS--------SKPRVEIHGGDLRS-FFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDA-TF- 107 (180)
T ss_dssp TTEECCTTCBCCGGGGS--------SCCEEEEESSCTTC-EEEEEEEECSCSBTTBCTTCCEEEEEEEEEETTSBG-GG-
T ss_pred CCeEcCCCCCcCHHHhC--------cCCeEEEecCCCCc-eEEEEEeCCCCCCCccCCCccEEEEEEeccCcCccc-cC-
Confidence 35567888999888764 38999999999887 999999999999987776 78999999999987432 11
Q ss_pred CCCCcccccCcccCeeeecCCCCCCCccCCCCCCCCceEEEEEEeeCCcCCCCC
Q 029999 106 FSGKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNHGHRFQFKLYALDDEMHLGN 159 (184)
Q Consensus 106 ~~~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g~HrY~f~vyAl~~~l~l~~ 159 (184)
| .+..+|.|||||.|.|||+|+||||+.++++++
T Consensus 108 -------------G-------~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~ 141 (180)
T 1wko_A 108 -------------G-------KEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFP 141 (180)
T ss_dssp -------------S-------EEEECCCCCCCCSSCEEEEEEEEECCTTCCCCC
T ss_pred -------------C-------ceeeeeCCCCCCCCceEEEEEEEecCCccCCCC
Confidence 1 135789999999999999999999998887764
No 10
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A
Probab=99.92 E-value=3.1e-25 Score=179.71 Aligned_cols=102 Identities=25% Similarity=0.382 Sum_probs=82.5
Q ss_pred CCCCCCCCCcccccCCCCCCCCCcCe-eEeccCCCCceEEEEEEecCCCCCCCCCC-cceEEEEEEccCCCCCCCCCCCC
Q 029999 30 EINHQGRLPRKYTNEGQGAKKNISPR-LEWYNVPEGTKSLALVVEDIDAPDPSGPI-VPWTHWVVVNIPPTLKGLPEGFS 107 (184)
Q Consensus 30 ~f~~g~~lp~~~t~~g~g~~~n~sP~-l~w~~~P~~tks~alim~DpDaP~~~~p~-~~~~HW~v~nIp~~~~~l~~g~~ 107 (184)
.+.+|..|+.+.+. .+|+ |+|++.|+++++|+|+|+|||||++.++. ++|+||+++|||++ .+++|..
T Consensus 48 ~v~~G~~l~~~~~~--------~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~~~~~~~~~~HWlv~nIp~~--~~~~g~~ 117 (200)
T 2gzq_A 48 EVNHGNILDLAGTG--------SVPRNIKFSEEPPEDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSK--ELVKGTD 117 (200)
T ss_dssp EECSSCEEESTTCS--------SCCSEEEESSCCCTTEEEEEEEEETTCSCSSCCTTCSEEEEEEEEECSS--EEETTCC
T ss_pred ccCCCCEeCHHHHh--------CCCceEEEccCCCCCceEEEEEECCCCCCCCCCCCCCEEEEEEeCCCcC--cccCCcc
Confidence 46778878776553 4899 99999999999999999999999987776 78999999999986 3555432
Q ss_pred CCcccccCcccCeeeecCCCCCCCccCCCCCCC--CceEEEEEE--eeCCcCCC
Q 029999 108 GKEEEIGGEYAGIKEGNNDWKVPGWRGPKLPNH--GHRFQFKLY--ALDDEMHL 157 (184)
Q Consensus 108 ~~~~~~~~~~~g~~~g~n~~g~~~Y~GP~Pp~g--~HrY~f~vy--Al~~~l~l 157 (184)
.|+.+..+|.|||||.| .|||+|+|| +|+.++++
T Consensus 118 ----------------~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~ 155 (200)
T 2gzq_A 118 ----------------KNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNV 155 (200)
T ss_dssp ----------------TTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCB
T ss_pred ----------------CCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccc
Confidence 23345679999999976 699999986 99876654
Done!