BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030007
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp.
japonica GN=Os08g0359500 PE=2 SV=1
Length = 213
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 97/134 (72%), Gaps = 6/134 (4%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSRHP VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSAT+G D YE ++L DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
V+V ESK SVG+R+I +V+KAE KWW +L++ K P F+KVDWDKW+DED++G
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG----- 115
Query: 121 PADMDFGDLDFSKM 134
AD++ +DFS
Sbjct: 116 -ADVNVDGMDFSNF 128
>sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica
GN=OsI_027940 PE=1 SV=2
Length = 210
Score = 153 bits (387), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 97/134 (72%), Gaps = 6/134 (4%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSRHP VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSAT+G D YE ++L DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
V+V ESK SVG+R+I +V+KAE KWW +L++ K P F+KVDWDKW+DED++G
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG----- 115
Query: 121 PADMDFGDLDFSKM 134
AD++ +DFS
Sbjct: 116 -ADVNVDGMDFSNF 128
>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana
GN=At3g03773 PE=1 SV=1
Length = 150
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSR+P V WAQR+D+VY+T+ LPDA+D+ +K EP+G F FSA G +E ++LY K
Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGK 59
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 114
+ + E + +VGLRNI + ++K E WW+RLLK KP ++KVDW+KW DEDEE
Sbjct: 60 I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112
>sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=wos2 PE=2 SV=1
Length = 186
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 25/169 (14%)
Query: 2 SRHPTVKWAQRTDR-------VYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVD 54
++ P V WAQR+++ +Y+T+ +PDA D K+ L PE K + SG + Y V
Sbjct: 5 TQIPEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPE-KLVIDSKSGANA-HYAVQ 62
Query: 55 IDLYDKVDVNESKASVGLRNIHYLVKKAE--NKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
ID + +DV +SK SV R I +++ K E ++W RL K+ + +L+ D+D+W+DED
Sbjct: 63 IDFFKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLTKEKLRLH-WLRTDFDRWVDED 121
Query: 113 EE---------GKDDKP--PADMDFGDLDFSKMNMGGLDAEAAGGDEND 150
E+ G P A G +DFS+ G L AG D +D
Sbjct: 122 EQEAQPEVSPFGAGGMPDLSALGGMGGMDFSQ--FGNLGGAGAGEDASD 168
>sp|Q23280|YOCA_CAEEL Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans
GN=ZC395.10 PE=3 SV=1
Length = 175
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
M++ PTV WAQR VY+TI++ +A+ +LK E K F +S DK YE ++ +D+
Sbjct: 1 MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEG-NKLHFQGSSKTDK--YEATLEFFDE 57
Query: 61 VD---VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKW 108
+D V + +S R + V+K WW RLL+ GK +LKVD+ KW
Sbjct: 58 IDPASVKHTGSST--RVVEITVQKKTPAWWPRLLQNKGKVH-WLKVDFGKW 105
>sp|Q5NVM4|TEBP_PONAB Prostaglandin E synthase 3 OS=Pongo abelii GN=PTGES3 PE=2 SV=1
Length = 160
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADM 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 125 DFGDLDFSKM--NMGG 138
FS+M NMGG
Sbjct: 123 ------FSEMMNNMGG 132
>sp|Q6PWL5|TEBP_MACFA Prostaglandin E synthase 3 OS=Macaca fascicularis GN=PTGES3 PE=1
SV=1
Length = 160
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADM 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 125 DFGDLDFSKM--NMGG 138
FS+M NMGG
Sbjct: 123 ------FSEMMNNMGG 132
>sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1
Length = 160
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADM 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 125 DFGDLDFSKM--NMGG 138
FS+M NMGG
Sbjct: 123 ------FSEMMNNMGG 132
>sp|Q3ZBF7|TEBP_BOVIN Prostaglandin E synthase 3 OS=Bos taurus GN=PTGES3 PE=1 SV=1
Length = 160
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADM 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 125 DFGDLDFSKM--NMGG 138
FS+M NMGG
Sbjct: 123 ------FSEMMNNMGG 132
>sp|P83868|TEBP_RAT Prostaglandin E synthase 3 OS=Rattus norvegicus GN=Ptges3 PE=1 SV=2
Length = 160
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADM 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 125 DFGDLDFSKM--NMGG 138
FS+M +MGG
Sbjct: 123 ------FSEMMDHMGG 132
>sp|Q9R0Q7|TEBP_MOUSE Prostaglandin E synthase 3 OS=Mus musculus GN=Ptges3 PE=1 SV=1
Length = 160
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADM 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR 122
Query: 125 DFGDLDFSKM--NMGG 138
FS+M +MGG
Sbjct: 123 ------FSEMMDHMGG 132
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPD-KIPYEVDIDLYDKVDV 63
P V WAQR +Y+ +++ DAQD+ + +E F G + YE ++ V
Sbjct: 6 PHVYWAQRHGEIYLRVEISDAQDLSIGVEENILQFRGQGHGAKGENEYEFSLEFLKPVK- 64
Query: 64 NESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E K R ++ V+K E WW+RL KQ K P+FL D+D+W+DE
Sbjct: 65 PEVKHKSTQRQVNITVRKQEEVWWNRLTKQE-KKPLFLAPDFDRWLDES 112
>sp|Q90955|TEBP_CHICK Prostaglandin E synthase 3 (Fragment) OS=Gallus gallus GN=PTGES3
PE=1 SV=1
Length = 146
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Query: 16 VYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNI 75
V+I + D++DV + E + K FS G D + +IDL++ +D NESK R+I
Sbjct: 1 VFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSI 59
Query: 76 HYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPADMDFGDLDFSKM 134
++K E+ + W RL K+ K +L VD++ W D +++ +D D FS+M
Sbjct: 60 LCCLRKGESGQAWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFDR------FSEM 112
Query: 135 --NMGG 138
NMGG
Sbjct: 113 MNNMGG 118
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHHELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K E++WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKESQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SBA1 PE=1 SV=3
Length = 216
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 20/145 (13%)
Query: 5 PTVKWAQRT-------DRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP-----DKIPYE 52
P V WAQR+ + V IT+ + D +L ++P A S P + Y+
Sbjct: 8 PQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKP-SYIELKAQSKPHVGDENVHHYQ 66
Query: 53 VDIDLYDKVDVNESKASVGLRNIHYLV----KKAENKWWSRLLKQAGKPPVFLKVDWDKW 108
+ IDLY ++ ++ V HY + K E+++W RL K+ K P ++K D+DKW
Sbjct: 67 LHIDLYKEIIPEKTMHKVA-NGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDKW 124
Query: 109 IDEDEEGKDDKPPADMDFGDLDFSK 133
+DEDE+ + + D G +DFS+
Sbjct: 125 VDEDEQDEVEAEGNDAAQG-MDFSQ 148
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 2 SRHPTVKWAQRTDRVYITIDLPDAQ-------DVKLKLEPEGKFFFSATSGPDKIPYEVD 54
S P V WAQR +Y+ ++L D + D L+ +G + D I YE
Sbjct: 5 SLRPHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGH-----GAKGDNI-YEFQ 58
Query: 55 IDLYDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
I+ + V+ + V R ++ V+K E+ WW RL KQ K P+FL D+D+W+DE
Sbjct: 59 IEFLEPVE-PKPVCRVTQRQLNITVQKKESSWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K ++WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITDNVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K + WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPAYRLTQRQVNITVQKKGSHWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDK--IPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + E F A K YE ++ D V
Sbjct: 10 PHVYWAQRHRELYLRVELSDVQNPAIS-TTENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 68
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K ++WW RL KQ K P+FL D+D+W+DE
Sbjct: 69 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 116
>sp|Q9VH95|YC17_DROME Uncharacterized protein CG16817 OS=Drosophila melanogaster
GN=CG16817 PE=1 SV=1
Length = 184
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPD-KIPYEVDIDLYDKVDV 63
P V WAQR D +Y+ ID+ + +D++ K+ E F F + D YEV ++ +VD
Sbjct: 10 PPVSWAQRNDLIYVIIDV-ECKDIEHKVT-EKTFTFKGVNVLDPSKKYEVTLNFLHEVDP 67
Query: 64 NESKASVGLRNIHYLV-KKAENKWWSRLLKQAGKPPVFLKVDWDKWIDE--DEEG 115
+ + R + + + KKA +WS L K FLK ++ KW DE DEEG
Sbjct: 68 EKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKTKLH-FLKANFAKWRDESDDEEG 121
>sp|Q9D9A7|PTG3L_MOUSE Putative protein PTGES3L OS=Mus musculus GN=Ptges3l PE=2 SV=1
Length = 131
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 1 MSRHPT-VKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYD 59
M R P W R V++ + D+ DV + +E + + FS +G D + +I+ Y
Sbjct: 1 MERQPARTLWYDRPKYVFMEFCVEDSTDVSVLIE-DHRVVFSCRNG-DGVELYNEIEFYA 58
Query: 60 KVDVNESKASVGLRNIHYLVKKAENKW-WSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDD 118
KV+ +S+ R+I V+K + K W RL K+ KP V+L VD+D W D EG D+
Sbjct: 59 KVNSKDSQDKRSGRSITCFVRKWKEKVAWPRLTKEDIKP-VWLSVDFDNW--RDWEGDDE 115
Query: 119 KPPADMD 125
A ++
Sbjct: 116 VELAQVE 122
>sp|Q9CWU0|TDR12_MOUSE Tudor domain-containing protein 12 OS=Mus musculus GN=Tdrd12 PE=2
SV=2
Length = 1215
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 2 SRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKV 61
S HP +KW Q+ D V + I + + +D K K + + FSA G DK Y D++L +
Sbjct: 1073 SFHPQIKWFQKDDVVILKIKIRNVKDYKCKFFTD-RVIFSAWVG-DKF-YLADLELQGDI 1129
Query: 62 DVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
++ K + + K + + W LLKQ F D+D W EE ++D P
Sbjct: 1130 RKDDCKCIIKDDEPLITLAKEKQECWCGLLKQRNPNVAF---DFDHW----EECEEDSP 1181
>sp|P24851|LT_POVBO Large T antigen OS=Bovine polyomavirus PE=2 SV=2
Length = 619
Score = 33.9 bits (76), Expect = 0.65, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 22/83 (26%)
Query: 98 PVFLKVDWDKWIDEDEEGKDDKPPADMDFGDLDFSKMNMGGLDAEAAGGDENDESDTEEE 157
P + W++W +E +G D++ DL +E + SD EEE
Sbjct: 70 PEYGTSQWEQWWEEFNQGFDEQ--------DLHCD--------------EELEPSDNEEE 107
Query: 158 NEVGTTPAGNREAPPPSTSSEPD 180
N G+ G++ PP + PD
Sbjct: 108 NPAGSQAPGSQATPPKKPRTSPD 130
>sp|Q9CR95|NECP1_MOUSE Adaptin ear-binding coat-associated protein 1 OS=Mus musculus
GN=Necap1 PE=1 SV=2
Length = 275
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 109 IDEDEEGKDDKPPADMDFGDLDFSKMNMGGLDAEAAGGDENDESDTEEENEVGTTPAGNR 168
I ++ + D++P D+ F + K+++G + A+ G + S T + + P G
Sbjct: 136 ISKESQEMDNRPKLDLGFKEGQTIKLSIGNITAKKGGASKPRASGTGGLSLLPPPPGGKV 195
Query: 169 EAPPPSTS 176
PPPS+S
Sbjct: 196 TIPPPSSS 203
>sp|P69682|NECP1_RAT Adaptin ear-binding coat-associated protein 1 OS=Rattus norvegicus
GN=Necap1 PE=1 SV=1
Length = 277
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 109 IDEDEEGKDDKPPADMDFGDLDFSKMNMGGLDAEAAGGDENDESDTEEENEVGTTPAGNR 168
I ++ + D +P D+ F + K+++G + A+ G + S T + + P G
Sbjct: 136 ISKESQEMDSRPKLDLGFKEGQTIKLSIGNITAKKGGTSKPRASGTGGLSLLPPPPGGKV 195
Query: 169 EAPPPSTS 176
PPPS+S
Sbjct: 196 TIPPPSSS 203
>sp|A2ALU4|SHRM2_MOUSE Protein Shroom2 OS=Mus musculus GN=Shroom2 PE=1 SV=1
Length = 1481
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 107 KWI-DEDEEGKDDKPPADMDFGDLDFSKMNMGGLDAEAAGGDENDESDTEEENEVGTTPA 165
+W+ +D G+ PP + F D+ F K G + DE+ + + + TP
Sbjct: 401 RWLCSDDRAGRPSGPPGRLQFSDVHFLKSYHGSQHQQQC-SDESPRAPSSPRELLHITPG 459
Query: 166 GNREAPP 172
G + PP
Sbjct: 460 GGLQEPP 466
>sp|Q869L3|MDN1_DICDI Midasin OS=Dictyostelium discoideum GN=mdn1 PE=3 SV=2
Length = 5900
Score = 30.8 bits (68), Expect = 5.5, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 111 EDEEGKDDKPPADMDFGDLDFSKMNMGGLDAEAAGGDENDESD--------TEEENEVGT 162
+DE KD + P + D SK N+ D E D +D T EN+ G
Sbjct: 5295 QDETPKDSEQP--LGVKDKTGSKSNVSNTDEEMKDESNQDNADDDSGMTQPTPSENDTGA 5352
Query: 163 TPAGNREAPPPSTSSEPDTK 182
+ PP S++ +P K
Sbjct: 5353 LKNLKSQPPPQSSAQQPPKK 5372
>sp|Q6K223|ARFH_ORYSJ Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8
PE=2 SV=1
Length = 681
Score = 30.4 bits (67), Expect = 7.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 117 DDKPPADMDFGD--LDFSKMNMGGLDAEAAGGDENDESDTEEENEVGTTPAGNREAPPPS 174
D KPP M FG L +M++ G + AA G+ + +TE+ G+ + +P +
Sbjct: 514 DAKPPGLMLFGQRILTERQMSLSGTTSPAATGNSSLNWNTEKGASEGSGSGVIQNSPTDN 573
Query: 175 TSSE 178
TSSE
Sbjct: 574 TSSE 577
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.132 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,978,928
Number of Sequences: 539616
Number of extensions: 3803248
Number of successful extensions: 12375
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 11890
Number of HSP's gapped (non-prelim): 517
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)