BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030012
(184 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|343887275|dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]
Length = 231
Score = 314 bits (805), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 159/184 (86%), Positives = 164/184 (89%), Gaps = 11/184 (5%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 60
MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD
Sbjct: 59 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 118
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPR 120
VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVS + +++
Sbjct: 119 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSRI-----------LLNVSST 167
Query: 121 RTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEK 180
+GDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSP LKIQFAHFPF LPSDGDEK
Sbjct: 168 CSGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPALKIQFAHFPFRLPSDGDEK 227
Query: 181 CTPR 184
TPR
Sbjct: 228 RTPR 231
>gi|225429574|ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera]
gi|296081671|emb|CBI20676.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 234 bits (598), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 60
+RPGA D G+ V P+P + G TA ++KGY +P+ DPNLIGQRRD+A GI+P IPD
Sbjct: 59 VRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPD 118
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPR 120
+ PSS N P ESN+LFVDGLP DCTRREV HLFRPF+G++EIRV+HKEPR
Sbjct: 119 IER--PSSFGNVESLPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPR 176
Query: 121 RTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
+GD+AMVLCFVEF+D C+RTA++AL GYKFDDKKPDSPTL+IQFAHFPF LPSD
Sbjct: 177 HSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPSD 232
>gi|224088786|ref|XP_002308540.1| predicted protein [Populus trichocarpa]
gi|222854516|gb|EEE92063.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 140/213 (65%), Gaps = 33/213 (15%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIA--------P 52
++ G+ GL +GVG PEP + G+ AS KGYSSPL DP+L+ QR D + P
Sbjct: 59 LQLGSYGLNGYSGVGFRPEPVIGGVMPGASGKGYSSPLEDPSLLAQRGDASMHAIGGAIP 118
Query: 53 G-------------------------INPTIPDVINGVPSSLRNNAGSPLKKGESNLLFV 87
G + IPD+IN P SLR+ G P+ KGESN+LFV
Sbjct: 119 GSTGKGYPSPLEDPSLLSQRGDASVRVTAAIPDMINDRPGSLRSADGPPVPKGESNILFV 178
Query: 88 DGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDAL 147
DGLPTDCTRREV HLFRPF+GY+EIRV+HKE R++GDRA VLCFVEF D CA TAM+AL
Sbjct: 179 DGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAATAMEAL 238
Query: 148 HGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEK 180
GYKFDDKKPDSPTLKIQFA FPF PSD D K
Sbjct: 239 QGYKFDDKKPDSPTLKIQFARFPFRPPSDRDGK 271
>gi|449447147|ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED: uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 134/184 (72%), Gaps = 7/184 (3%)
Query: 3 PGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTI---P 59
PGA G D G +PEP + G+T+ S GY+SP D +L QR+DIA G +P +
Sbjct: 63 PGAYGYTDLGGNSKYPEPVIGGVTSGGSATGYASPFAD-SLASQRQDIAVGSSPGVMGRA 121
Query: 60 DVINGVPSSL---RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIH 116
D+ + +SL R P ESN+LFVDGLPTDCTRREV HLFRPF+GY++IRV+H
Sbjct: 122 DIGHERANSLNLIRTAECDPSPLRESNVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVH 181
Query: 117 KEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
KEPRRTGD+AMVLCFVEF + K ++ AM+AL GYKFDDKKPDSP LKIQFAHFPFHLPS+
Sbjct: 182 KEPRRTGDKAMVLCFVEFVEAKFSQAAMEALQGYKFDDKKPDSPVLKIQFAHFPFHLPSN 241
Query: 177 GDEK 180
D++
Sbjct: 242 HDDR 245
>gi|225429572|ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
vinifera]
Length = 229
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 128/176 (72%), Gaps = 12/176 (6%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 60
+RPGA D G+ V P+P + G TA ++KGY +P+ DPNLIGQRRD+A GI+P IPD
Sbjct: 59 VRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPD 118
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPR 120
+ PSS N P ESN+LFVDGLP DCTRREV +IRV+HKEPR
Sbjct: 119 IER--PSSFGNVESLPPPVQESNILFVDGLPKDCTRREVG----------QIRVVHKEPR 166
Query: 121 RTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
+GD+AMVLCFVEF+D C+RTA++AL GYKFDDKKPDSPTL+IQFAHFPF LPSD
Sbjct: 167 HSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPSD 222
>gi|356514689|ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 124/176 (70%), Gaps = 13/176 (7%)
Query: 10 DTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAP-GINPTIPDVINGVPSS 68
DT G VH EP VKGYS PL DP+ ++RD P I +PDV + P+S
Sbjct: 59 DTFGSRVHSEP----------VKGYS-PLADPD-PSKKRDTTPLSITHGVPDVNSERPAS 106
Query: 69 LRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV 128
+ G P+ +SN+LFV GLP DCTRREV HLFRPF+GY++IRV+HKEPRR+GD+AM
Sbjct: 107 KSSYDGLPISAADSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMT 166
Query: 129 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTPR 184
LCFVEF D KCA TAM+AL GYKFDDKKPDSPTLKI+FAHFPF LPSD + R
Sbjct: 167 LCFVEFVDSKCALTAMEALQGYKFDDKKPDSPTLKIEFAHFPFRLPSDHGSSLSTR 222
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 120/167 (71%), Gaps = 13/167 (7%)
Query: 11 TAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAP-GINPTIPDVINGVPSSL 69
T G VH EP VKGYS PL DP L ++RD P GIN +PDV + P+S
Sbjct: 59 TLGSRVHSEP----------VKGYS-PLADPCL-SKKRDTTPLGINNGVPDVSSERPASK 106
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
+ G P+ +SN+LFV GLP DCTRREV HLFRPF+GY++IRV+HKEPRR+GD+AM L
Sbjct: 107 SSYDGLPISAADSNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTL 166
Query: 130 CFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
CFVEF D CA TA++ L GYKFDDKKPDSPTLKIQ AHFPF LPSD
Sbjct: 167 CFVEFVDSNCALTALETLQGYKFDDKKPDSPTLKIQPAHFPFRLPSD 213
>gi|255550095|ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 128/183 (69%), Gaps = 7/183 (3%)
Query: 2 RPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQR-RDIAPGINP-TIP 59
+P + GL ++ + P G+ AS +GY SPL DP+L R RD + + IP
Sbjct: 58 QPVSYGLNNSNNDDI---PVRSGVIPGASSRGYLSPLNDPSLPSHRLRDTSVNVTTLAIP 114
Query: 60 DVINGVP-SSLRNNAGSP-LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK 117
DVIN P + LR NA SP + + ESN+LFVDGLPTDCTRREV HLFRPF+GY++I+VIH+
Sbjct: 115 DVINDQPPNYLRINADSPSVSRTESNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHR 174
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDG 177
EPRR GD+AMV CFVEF D KCA TAM+AL GYKFDD++ +SP L+I A FPF P D
Sbjct: 175 EPRRDGDKAMVYCFVEFADAKCAITAMEALQGYKFDDRRSNSPVLRIHLARFPFRPPHDR 234
Query: 178 DEK 180
+E+
Sbjct: 235 NEQ 237
>gi|388521817|gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 114/153 (74%), Gaps = 9/153 (5%)
Query: 30 SVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDG 89
++KGYS PL DP ++ +RD + G+NP DV + P N G +SN+LFVD
Sbjct: 86 NIKGYS-PLDDP-VLRTKRDTSLGVNP---DVSSERPIPKANREG----LADSNVLFVDV 136
Query: 90 LPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHG 149
LP DCTRREV HLFRPF+GY++IRV+HKEPRR+GD+AMVLCFVEFDD KCA TAM+AL G
Sbjct: 137 LPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCALTAMEALQG 196
Query: 150 YKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCT 182
YKFDDKKPDS TLKIQFAHFPF P+D T
Sbjct: 197 YKFDDKKPDSRTLKIQFAHFPFRPPADNGTTTT 229
>gi|357465775|ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 229
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 116/172 (67%), Gaps = 13/172 (7%)
Query: 7 GLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVI--NG 64
G+ DT G VH E +PL D +L +RD G++ +PD I N
Sbjct: 66 GVDDTRGSRVHSEHNATSY----------NPLEDVDL-STKRDALLGVSTGVPDPIANNE 114
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
S N P+ ESN+LFV GLP DCTRREV HLFRPF+GY++I+V+HKEPRR+GD
Sbjct: 115 RSISKSNYDALPVSAAESNILFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGD 174
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
+AM+ CFVEF +PKCA TAM+AL GYKFDDKKPDSPTLKI+FAHFPF P+D
Sbjct: 175 KAMIFCFVEFTEPKCALTAMEALQGYKFDDKKPDSPTLKIKFAHFPFRPPTD 226
>gi|147810268|emb|CAN75823.1| hypothetical protein VITISV_004156 [Vitis vinifera]
Length = 441
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
Query: 29 ASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVD 88
A++KGY + L +PNLIGQRRD+A GI+P IPD+ P+SLRN P ESN+LFVD
Sbjct: 280 ANIKGYPTSLENPNLIGQRRDVAHGISPGIPDIER--PNSLRNVESLPPLVRESNILFVD 337
Query: 89 GLPTDCTRREVSHLFRPFVGYREIRVIHKEPR-RTGDRAMVLCFVEFDDPKCARTAMDAL 147
GLP TRREV HLF PF+ ++EIRV+HKEPR +GD+AMVLCFVEF+D KC+RTA++AL
Sbjct: 338 GLPKYYTRREVGHLFLPFIDFKEIRVVHKEPRCNSGDKAMVLCFVEFNDAKCSRTALEAL 397
Query: 148 HGYKFDDKKPDSPTLKIQ 165
GY F DKKPDSP L IQ
Sbjct: 398 QGYIFVDKKPDSPALGIQ 415
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 114/157 (72%), Gaps = 7/157 (4%)
Query: 27 AVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLF 86
AVA +G +SPL D L+ RR + G TIPD+ P N P + ESN+LF
Sbjct: 57 AVARPRG-ASPLEDQALV--RRSSSLGRTATIPDIERPNPVL---NIDRP-SEDESNILF 109
Query: 87 VDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDA 146
VDGLPTDC RREV+HLFRPFVG++++R++HKEPRR+GD+A VLCFVEF+D KCA TAM A
Sbjct: 110 VDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKCAFTAMQA 169
Query: 147 LHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTP 183
L Y+FD++KPD+P LKIQFA FPF LP+ D++ P
Sbjct: 170 LQEYRFDERKPDAPVLKIQFARFPFRLPAAHDDRRLP 206
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 116/171 (67%), Gaps = 7/171 (4%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 60
++P A GL AG HP +G A + SPL DP L+ RR + G +IPD
Sbjct: 53 LQPRAYGLDGAAGAS-HPALAGLGGLAAGTTARGPSPLEDPALV--RRSSSLGKTASIPD 109
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPR 120
V + P L N G ++ ESN+LFVDGLPTDCTRREV+HLFRPFVG+++IR++HKEPR
Sbjct: 110 VEH--PRPLLNLDGP--REDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPR 165
Query: 121 RTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
+ DRA VLCFVEF D KCA TAM+AL Y+FD++KPD+ L I+FA FPF
Sbjct: 166 HSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAVLNIKFARFPF 216
>gi|226492197|ref|NP_001148276.1| LOC100281884 [Zea mays]
gi|195617106|gb|ACG30383.1| nucleic acid binding protein [Zea mays]
Length = 297
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 5 ALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVING 64
A G G G +P + G++ +A + L R + G +IPDV +
Sbjct: 119 ATGGATARGSGALEDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIPDVEHH 178
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
SS+ N G + ESN+LFVD LPTDCTRREV+HLFR F G+++IRV+HKEPRR+GD
Sbjct: 179 --SSIPNFDGP--SENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSGD 234
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLP 174
+A VLCFVEF++ K ART M AL GY+FDD+KPD L+I FA FPF LP
Sbjct: 235 KAYVLCFVEFENAKFARTPMQALQGYRFDDRKPDDRCLEIHFARFPFALP 284
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 94/138 (68%), Gaps = 3/138 (2%)
Query: 40 DPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGES-NLLFVDGLPTDCTRRE 98
DP L+GQR+ GI+P + + + S LK ES N +F++GLP DC+RRE
Sbjct: 161 DPVLMGQRQG-GVGIDPALARLPDSAISGSTFRLPDHLKPDESSNTIFIEGLPADCSRRE 219
Query: 99 VSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPD 158
V+H+FRPF+GY++I+VIHKEPRR G VLCFVEF D KCA TA+ AL GYKFD+ + D
Sbjct: 220 VAHIFRPFIGYKQIKVIHKEPRRAGGEPYVLCFVEFTDAKCALTALSALKGYKFDEHEHD 279
Query: 159 -SPTLKIQFAHFPFHLPS 175
S +LK+Q A+FP P+
Sbjct: 280 SSSSLKLQLANFPGSRPA 297
>gi|116781833|gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 71/89 (79%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN LFV+GLP DCTRRE +H+FRPF+G++E+R++ KEPRR G +VLCFV+F D +CA
Sbjct: 157 SNTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRPGGDPLVLCFVDFTDARCAA 216
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TA++AL GYKFD+ +S L++QFA FP
Sbjct: 217 TALEALQGYKFDETDRESTGLRLQFARFP 245
>gi|116781380|gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 72/89 (80%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN LFV+GLP CTRRE +H+FRPFVG++E+R+++KE R G +VLCFV+F +P CA
Sbjct: 158 SNTLFVEGLPPKCTRREAAHIFRPFVGFKEVRLVNKEARNPGGEPLVLCFVDFANPNCAA 217
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TAM+AL GYKFD+ + +SP+LK+QFA +P
Sbjct: 218 TAMEALQGYKFDENEKESPSLKLQFARYP 246
>gi|302760451|ref|XP_002963648.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
gi|300168916|gb|EFJ35519.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
Length = 92
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 70/86 (81%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S+ LFVDGLP+DCTRRE +H+FRPF+G++E+R++HK+ +RT +VLCFVEF D KCA
Sbjct: 6 SSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRTTGEKLVLCFVEFMDAKCAA 65
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
TA++AL GYKFD+ PDS L++ FA
Sbjct: 66 TALEALQGYKFDENDPDSYVLRLTFA 91
>gi|302785932|ref|XP_002974737.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
gi|300157632|gb|EFJ24257.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
Length = 92
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 69/86 (80%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S+ LFVDGLP+DCTRRE +H+FRPF+G++E+R++HK+ +R +VLCFVEF D KCA
Sbjct: 6 SSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRATGEKLVLCFVEFMDAKCAA 65
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
TA++AL GYKFD+ PDS L++ FA
Sbjct: 66 TALEALQGYKFDENDPDSYVLRLTFA 91
>gi|413953430|gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 262
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 73/94 (77%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++G+P+DCTRREVSH+FRPFVG+RE+R+++KEP+ G +VLCFV+F
Sbjct: 154 PLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFA 213
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
+P + A+DAL GYKFD+ +SP L++QFA F
Sbjct: 214 EPTQSAIALDALQGYKFDEHDRNSPNLRLQFARF 247
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL + SN LFV+GLP +CTRREVSH+FRPFVG+RE+R+++KE R G +VLCFV+F
Sbjct: 174 PLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFS 233
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A A+DAL GYKFD+ +S L++QFA FP
Sbjct: 234 TPAQAAVALDALQGYKFDEHDRESANLRLQFARFP 268
>gi|302143942|emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ LFV+GLP +CTRREVSH+FRPFVGY+E+R++ KE R +G +VLCFV+F
Sbjct: 124 PLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFV 183
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A TAMDAL GYKFD+ DS L++QFA +P
Sbjct: 184 SPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 218
>gi|359490723|ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ LFV+GLP +CTRREVSH+FRPFVGY+E+R++ KE R +G +VLCFV+F
Sbjct: 123 PLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFV 182
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A TAMDAL GYKFD+ DS L++QFA +P
Sbjct: 183 SPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 217
>gi|223973687|gb|ACN31031.1| unknown [Zea mays]
Length = 221
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 73/94 (77%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++G+P+DCTRREVSH+FRPFVG+RE+R+++KEP+ G +VLCFV+F
Sbjct: 113 PLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFA 172
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
+P + A+DAL GYKFD+ +SP L++QFA F
Sbjct: 173 EPTQSAIALDALQGYKFDEHDRNSPNLRLQFARF 206
>gi|427199356|gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
Length = 233
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 72/95 (75%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ LFV+GLP++CTRREV+H+FRPFVGY+E+R++ KE R G +VLCFV+F
Sbjct: 127 PLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFL 186
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A TAMDAL GYKFD+ DS +L++QFA +P
Sbjct: 187 SPAHAATAMDALQGYKFDEHDRDSVSLRLQFARYP 221
>gi|242091796|ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
gi|241914611|gb|EER87755.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
Length = 266
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 72/94 (76%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++G+PT CTRREVSH+FRPFVG+RE+R+++KEP+ G +VLCFV+F
Sbjct: 157 PLPPDASNTLYIEGIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFA 216
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
+P + AM+AL GYKFD+ +SP L++QFA F
Sbjct: 217 EPTQSAIAMEALQGYKFDEHDRNSPNLRLQFARF 250
>gi|413953429|gb|AFW86078.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 130
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 73/94 (77%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++G+P+DCTRREVSH+FRPFVG+RE+R+++KEP+ G +VLCFV+F
Sbjct: 22 PLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFA 81
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
+P + A+DAL GYKFD+ +SP L++QFA F
Sbjct: 82 EPTQSAIALDALQGYKFDEHDRNSPNLRLQFARF 115
>gi|255549562|ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 232
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
Query: 55 NPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV 114
PT+ D G+ S + L ++ LFV+GLP+DC+RREV+H+FRPFVGY+E+R+
Sbjct: 108 GPTVKDRTLGLGS---GRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
Query: 115 IHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+ KE RR G +VLCFV+F P A TAMDAL GYKFD+ DS L++QFA +P
Sbjct: 165 VSKESRRPGGDPLVLCFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARYP 220
>gi|224118350|ref|XP_002317797.1| predicted protein [Populus trichocarpa]
gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S+ LFV+GLP+DCTRREVSH+FRPFVGY+E+R++ KE R G +VLCFV+F P A
Sbjct: 133 SSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAA 192
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TAMDAL GY+FD+ DS L++QFA +P
Sbjct: 193 TAMDALQGYRFDEHDRDSFHLRLQFARYP 221
>gi|449456997|ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
gi|449529543|ref|XP_004171759.1| PREDICTED: uncharacterized protein LOC101224897 [Cucumis sativus]
Length = 232
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 70/95 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN LFV+GLP+ CTRREV+H+FRPFVGY+E+R+++KE R G +VL FV+F
Sbjct: 126 PLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVLGFVDFV 185
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A TAMDAL GYKFD+ DS L++QFA FP
Sbjct: 186 SPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFP 220
>gi|224135091|ref|XP_002321981.1| predicted protein [Populus trichocarpa]
gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 69/89 (77%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S+ LFV+GLP+DCTRREVSH+FRPFVGY+E+R++ KE R G +VLCFV+F P A
Sbjct: 120 SSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVLCFVDFLSPAHAA 179
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
T+MDAL GY+FD+ DS L++QFA +P
Sbjct: 180 TSMDALQGYRFDEHDRDSVDLRLQFARYP 208
>gi|356576041|ref|XP_003556143.1| PREDICTED: uncharacterized protein LOC100812551 isoform 1 [Glycine
max]
Length = 252
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 146 PLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 205
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 206 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 240
>gi|356576043|ref|XP_003556144.1| PREDICTED: uncharacterized protein LOC100812551 isoform 2 [Glycine
max]
Length = 244
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 138 PLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 197
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 198 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 232
>gi|356576045|ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
max]
Length = 252
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 146 PLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 205
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 206 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 240
>gi|356535806|ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
Length = 251
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 145 PLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 204
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 205 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 239
>gi|388504624|gb|AFK40378.1| unknown [Medicago truncatula]
Length = 228
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 70/91 (76%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G +N LFV+GLP++CTRREV+H+FRPFVGY+E+R++ KE R+ G ++LCFV+F P
Sbjct: 127 GATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAH 186
Query: 140 ARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
A TAMDALHGYKFD+ +S L+ QFA P
Sbjct: 187 AATAMDALHGYKFDELDRNSVNLRFQFARNP 217
>gi|255637493|gb|ACU19073.1| unknown [Glycine max]
Length = 251
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 145 PLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 204
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 205 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 239
>gi|356576047|ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
max]
Length = 245
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 139 PLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 198
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 199 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 233
>gi|212722122|ref|NP_001131419.1| uncharacterized protein LOC100192748 [Zea mays]
gi|194691466|gb|ACF79817.1| unknown [Zea mays]
Length = 270
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 5 ALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVING 64
A G G G +P + G++ +A + L R + G +IPDV +
Sbjct: 119 ATGGATARGSGALEDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIPDVEHH 178
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
SS+ N G + ESN+LFVD LPTDCTRREV+HLFR F G+++IRV+HKEPRR+GD
Sbjct: 179 --SSIPNFDGP--SENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSGD 234
Query: 125 RAMVLCFVEFDDPKCARTAMDALHG 149
+A VLCFVEF++ K ART M AL G
Sbjct: 235 KAYVLCFVEFENAKFARTPMQALQG 259
>gi|358345383|ref|XP_003636759.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|23304837|emb|CAD48198.1| RNA-binding protein [Medicago truncatula]
gi|355502694|gb|AES83897.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 261
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 4 GALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVIN 63
GALGL G+G P + +A+ G P PN G P ++P
Sbjct: 84 GALGL--QRGIGGLPNHSLSDPSAMIGRHGGGGPDLAPNGRGMNYGFQPPMDPV------ 135
Query: 64 GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
S + L S L+++GLP+DCTRREV+H+FRPFVGYRE+R++ KE + G
Sbjct: 136 ----SRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPFVGYREVRLVSKEAKHRG 191
Query: 124 DRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
D ++LCFV+F +P CA TA+ AL GYK D+ P+S L++QF+ +P
Sbjct: 192 D-PLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQFSRYP 237
>gi|168024982|ref|XP_001765014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683823|gb|EDQ70230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 11/120 (9%)
Query: 62 INGVPSSLRNNAGSP----LKKG-------ESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
+ G P +L N G+P L+ G S+ LFVDGLP DC+RRE +H+FRPF+G++
Sbjct: 36 MGGRPGALGLNGGAPEPDVLRGGLEVLPPDASSTLFVDGLPQDCSRREAAHIFRPFIGFK 95
Query: 111 EIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
E+R++HK+ +R +VLCFVEF D +CA TA++AL GYKFD+ +S L++ FA P
Sbjct: 96 EVRLVHKDAKRADGGKVVLCFVEFADARCAATALEALQGYKFDETDHESYVLRLTFARHP 155
>gi|224066731|ref|XP_002302187.1| predicted protein [Populus trichocarpa]
gi|222843913|gb|EEE81460.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN L+V+G P DC+RREV+H+FRPFVGY+E+R++ KE R+ G ++LCFV+F +P+CA
Sbjct: 150 SNTLYVEGFPPDCSRREVAHIFRPFVGYKEVRLVSKEARQRGGDPIILCFVDFVNPECAA 209
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TAM AL GYK D+ PDS L++QF+ P
Sbjct: 210 TAMSALQGYKVDEHDPDSRYLRLQFSRHP 238
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN LF++G+PTDC RREVSH+FRPFVG+RE+R++ KE R G ++LCFV+F+
Sbjct: 156 PLPPDASNTLFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPGGDPILLCFVDFE 215
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
A AMDAL GYKFD+ +SP L++QFA F
Sbjct: 216 TASQAAIAMDALQGYKFDEHDRNSPHLRLQFARF 249
>gi|449462154|ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
sativus]
gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis
sativus]
Length = 257
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 5/138 (3%)
Query: 38 LPDPNLIGQRRDIAPGINPTIPDVI--NGVPSSLRNNAGS---PLKKGESNLLFVDGLPT 92
LPDP ++ + ++P + P ++ N +P + G PL SN L+V+GLP
Sbjct: 108 LPDPIVMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPP 167
Query: 93 DCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKF 152
D +RREV+H+FRPFVGY+E+R++ KE + G ++LCFV+F +P CA TAM AL GYK
Sbjct: 168 DSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKM 227
Query: 153 DDKKPDSPTLKIQFAHFP 170
D++ P+S L++QF+ P
Sbjct: 228 DEQDPESNYLRLQFSRHP 245
>gi|293331463|ref|NP_001168957.1| uncharacterized protein LOC100382777 [Zea mays]
gi|223974013|gb|ACN31194.1| unknown [Zea mays]
Length = 287
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 72/95 (75%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+++GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 181 PLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 240
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P A A++AL GYKFD+ + DS L++QF+ FP
Sbjct: 241 NPAQATIALEALQGYKFDEHERDSAHLRLQFSRFP 275
>gi|326499832|dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 177 PLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 236
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A A++AL GYKFD+ +S L++QF+ FP
Sbjct: 237 SPAQATIALEALQGYKFDEHDRESAHLRLQFSRFP 271
>gi|218201560|gb|EEC83987.1| hypothetical protein OsI_30140 [Oryza sativa Indica Group]
Length = 218
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 112 PLPADASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 171
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P A A++AL GYKFD+ DS L++QF+ FP
Sbjct: 172 NPAQATLALEALQGYKFDEHDRDSAHLRLQFSRFP 206
>gi|222640974|gb|EEE69106.1| hypothetical protein OsJ_28175 [Oryza sativa Japonica Group]
Length = 268
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 162 PLPADASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 221
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P A A++AL GYKFD+ DS L++QF+ FP
Sbjct: 222 NPAQATLALEALQGYKFDEHDRDSAHLRLQFSRFP 256
>gi|357148760|ref|XP_003574884.1| PREDICTED: uncharacterized protein LOC100836479 [Brachypodium
distachyon]
Length = 296
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 190 PLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 249
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A A++AL GYKFD+ +S L++QF+ FP
Sbjct: 250 SPAQATIALEALQGYKFDEHDRESAHLRLQFSRFP 284
>gi|356535808|ref|XP_003536435.1| PREDICTED: uncharacterized protein LOC100816230 isoform 1 [Glycine
max]
Length = 251
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+ TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 145 PLPPDASSTLYVEGLPSGSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 204
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 205 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 239
>gi|449506960|ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus]
gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus]
Length = 257
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 5/138 (3%)
Query: 38 LPDPNLIGQRRDIAPGINPTIPDVI--NGVPSSLRNNAGS---PLKKGESNLLFVDGLPT 92
LPDP ++ + ++P + P ++ N +P + G PL SN L+V+GLP
Sbjct: 108 LPDPIVMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPP 167
Query: 93 DCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKF 152
D +RREV+H+FRPFVGY+E+R + KE + G ++LCFV+F +P CA TAM AL GYK
Sbjct: 168 DSSRREVAHIFRPFVGYKELRFVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKI 227
Query: 153 DDKKPDSPTLKIQFAHFP 170
D++ P+S L++QF+ P
Sbjct: 228 DEQDPESNYLRLQFSRHP 245
>gi|388500704|gb|AFK38418.1| unknown [Medicago truncatula]
Length = 252
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL + S+ L+V+GLP+D T+REV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 145 PLPRDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFA 204
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ P
Sbjct: 205 NPACAATALSALQGYKVDEINPESSYLRLQFSRSP 239
>gi|357443729|ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 252
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL + S+ L+V+GLP+D T+REV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 145 PLPRDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFA 204
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ P
Sbjct: 205 NPACAATALSALQGYKVDEINPESSYLRLQFSRSP 239
>gi|388513795|gb|AFK44959.1| unknown [Lotus japonicus]
Length = 239
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 72/95 (75%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+D T+REV+H+FRPFVGYRE+R++ KE + G ++LCFV+F+
Sbjct: 133 PLPPDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVTKESKHRGGDPLILCFVDFE 192
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ +P
Sbjct: 193 NPACAATALSALQGYKVDELDPESGHLRLQFSRYP 227
>gi|356535810|ref|XP_003536436.1| PREDICTED: uncharacterized protein LOC100816230 isoform 2 [Glycine
max]
Length = 243
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP+ TRREV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 137 PLPPDASSTLYVEGLPSGSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPLILCFVDFA 196
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ FP
Sbjct: 197 NPACAATALSALQGYKVDELNPESSHLRLQFSRFP 231
>gi|357443731|ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula]
Length = 147
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL + S+ L+V+GLP+D T+REV+H+FRPFVGYRE+R++ KE + G ++LCFV+F
Sbjct: 40 PLPRDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFA 99
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P CA TA+ AL GYK D+ P+S L++QF+ P
Sbjct: 100 NPACAATALSALQGYKVDEINPESSYLRLQFSRSP 134
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S+ L+V+GLP+D TRREV+H+FRPFVGYRE+R++ KE + G LCFV+F +P CA
Sbjct: 142 SSTLYVEGLPSDSTRREVAHIFRPFVGYREVRLVSKESKHRGGDPHYLCFVDFANPACAA 201
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TAM AL GYK D+ P+S L++QF+ +P
Sbjct: 202 TAMSALQGYKVDELNPESSHLRLQFSRYP 230
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334950|gb|EFH65368.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%)
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
RN PL SN L+V+GLP++C+RREV+H+FRPFVGYRE+R++ K+ + +VL
Sbjct: 130 RNRETLPLPPDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVL 189
Query: 130 CFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLP 174
CFV+F +P CA TA+ AL GY+ D+ + DS L++QF+ P P
Sbjct: 190 CFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP 234
>gi|363807818|ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
gi|255640386|gb|ACU20480.1| unknown [Glycine max]
Length = 230
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 69/89 (77%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
++ LFV+GLP++CTRREV+H+FRPFVGY+E+R++ KE R+ G +VLCFV+F P A
Sbjct: 130 TSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFMSPAHAA 189
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TAM+AL GYKFD+ +S L+ QFA +P
Sbjct: 190 TAMEALQGYKFDELDRNSVNLRFQFARYP 218
>gi|242081967|ref|XP_002445752.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
gi|241942102|gb|EES15247.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
Length = 203
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S L+++GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 97 PLPPDASPTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 156
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+P A A++AL GYKFD+ DS L++QF+ FP
Sbjct: 157 NPAQATIALEALQGYKFDEHDRDSAHLRLQFSRFP 191
>gi|388505956|gb|AFK41044.1| unknown [Lotus japonicus]
Length = 232
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
++ LFV+GLPT+C RREV+H+FRPFVGY+E+R++ KE R+ G +VLCFV+F+ P A
Sbjct: 130 TSTLFVEGLPTNCPRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLCFVDFESPAHAA 189
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TA DAL GYKFD+ +S L+ QFA +P
Sbjct: 190 TAKDALQGYKFDELDRNSANLRFQFARYP 218
>gi|313761403|gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
Length = 118
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 70/89 (78%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
++ L+V+G+P DC+RRE +H+FRPFVG++E+R++ K+ +R G VLCFV+F DPKCA
Sbjct: 3 TSTLYVEGVPADCSRREAAHIFRPFVGFKEVRLVRKDAKRPGGDQFVLCFVDFTDPKCAS 62
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
A++AL GYKFD+ +S TL++Q++ FP
Sbjct: 63 IALEALQGYKFDETDRNSETLRLQYSRFP 91
>gi|294463261|gb|ADE77166.1| unknown [Picea sitchensis]
Length = 376
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Query: 15 GVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNA- 73
G+H + + S + +S+ D +LIG G+ + G R+ A
Sbjct: 199 GMHANDFEGTVLGIGSKRVHSASFDDTSLIGSGSRFDRGMGSLQGSL--GRDGHGRDIAL 256
Query: 74 -GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
G +LF+DGLP DCT RE +H+FRPF+G++E+RV+HKEP+R G VLCFV
Sbjct: 257 TGGGADSAREPVLFIDGLPLDCTVREAAHIFRPFIGFKEVRVVHKEPKRPGGEKSVLCFV 316
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
EF D + A A +AL GYK D+ P+S TL+I F+ +
Sbjct: 317 EFTDLRHAAIAREALQGYKVDEHDPNSGTLRISFSLY 353
>gi|359493018|ref|XP_002264314.2| PREDICTED: uncharacterized protein LOC100242739 [Vitis vinifera]
Length = 261
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 68/96 (70%)
Query: 75 SPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEF 134
+PL S+ L+V+GLP D TRREV+H+FRPFVGY+E+R++ KE + G +VLCFV+F
Sbjct: 136 APLPPDASSTLYVEGLPPDSTRREVAHIFRPFVGYKEVRLVSKESKHRGRDPLVLCFVDF 195
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P CA TA+ AL GYK + DS +++QF+ +P
Sbjct: 196 TSPACAATALSALQGYKISEHDRDSAQMRLQFSQYP 231
>gi|296088114|emb|CBI35503.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 68/96 (70%)
Query: 75 SPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEF 134
+PL S+ L+V+GLP D TRREV+H+FRPFVGY+E+R++ KE + G +VLCFV+F
Sbjct: 167 APLPPDASSTLYVEGLPPDSTRREVAHIFRPFVGYKEVRLVSKESKHRGRDPLVLCFVDF 226
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P CA TA+ AL GYK + DS +++QF+ +P
Sbjct: 227 TSPACAATALSALQGYKISEHDRDSAQMRLQFSQYP 262
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|119360107|gb|ABL66782.1| At1g76940 [Arabidopsis thaliana]
gi|332197785|gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 233
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 69/93 (74%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN L+V+GLP++C+RREV+H+FRPFVGYRE+R++ K+ + +VLCFV+F +P CA
Sbjct: 135 SNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAA 194
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLP 174
TA+ AL GY+ D+ + DS L++QF+ P P
Sbjct: 195 TALSALQGYRMDENESDSKFLRLQFSRKPGSRP 227
>gi|26450151|dbj|BAC42194.1| unknown protein [Arabidopsis thaliana]
Length = 156
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 69/93 (74%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN L+V+GLP++C+RREV+H+FRPFVGYRE+R++ K+ + +VLCFV+F +P CA
Sbjct: 58 SNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAA 117
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLP 174
TA+ AL GY+ D+ + DS L++QF+ P P
Sbjct: 118 TALSALQGYRMDENESDSKFLRLQFSRKPGSRP 150
>gi|334183951|ref|NP_001185414.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197786|gb|AEE35907.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 179
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 69/93 (74%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN L+V+GLP++C+RREV+H+FRPFVGYRE+R++ K+ + +VLCFV+F +P CA
Sbjct: 81 SNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAA 140
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLP 174
TA+ AL GY+ D+ + DS L++QF+ P P
Sbjct: 141 TALSALQGYRMDENESDSKFLRLQFSRKPGSRP 173
>gi|357464011|ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491335|gb|AES72538.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 258
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Query: 80 GESNLLFVDGLPTDCTRREV-----SHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEF 134
G +N LFV+GLP++CTRREV S +FRPFVGY+E+R++ KE R+ G ++LCFV+F
Sbjct: 127 GATNTLFVEGLPSNCTRREVARILSSDIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDF 186
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A TAMDALHGYKFD+ +S L+ QFA P
Sbjct: 187 VSPAHAATAMDALHGYKFDELDRNSVNLRFQFARNP 222
>gi|326533746|dbj|BAK05404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 70/94 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN LF++G+PTDC RREVSH+FRPFVG++E+R+++KEPR G +VLCFV+F
Sbjct: 149 PLPPDASNTLFIEGIPTDCERREVSHIFRPFVGFQEVRLVNKEPRHPGGDPIVLCFVDFA 208
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
+ A AM+AL GYKFD+ SP L++QFA F
Sbjct: 209 NAAQAAIAMEALQGYKFDEHDRSSPQLRLQFARF 242
>gi|363818125|ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
gi|255644702|gb|ACU22853.1| unknown [Glycine max]
Length = 230
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
++ LFV+GLP +CTRREV+H+F PFVGY+E+R++ KE R+ G +VLCFV+F P A
Sbjct: 130 TSTLFVEGLPPNCTRREVAHIFPPFVGYKEVRLVSKESRQPGGDPLVLCFVDFLSPAHAA 189
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
TAM+AL GYKFD+ +S L+ QFA +P
Sbjct: 190 TAMEALQGYKFDELDRNSVNLRFQFARYP 218
>gi|186478724|ref|NP_173554.3| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191963|gb|AEE30084.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 421
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+V+GLP++C+RREVSH+FRPFVGYRE+R++ ++ + VLCFV+F+
Sbjct: 316 PLPPDVSNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFE 375
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+ CA TA+ AL Y+ D+ +PDS L++QF P
Sbjct: 376 NSACAATALSALQDYRMDEDEPDSKILRLQFFRNP 410
>gi|238478568|ref|NP_001154354.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191964|gb|AEE30085.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 253
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 68/95 (71%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+V+GLP++C+RREVSH+FRPFVGYRE+R++ ++ + VLCFV+F+
Sbjct: 148 PLPPDVSNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFE 207
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+ CA TA+ AL Y+ D+ +PDS L++QF P
Sbjct: 208 NSACAATALSALQDYRMDEDEPDSKILRLQFFRNP 242
>gi|357110599|ref|XP_003557104.1| PREDICTED: uncharacterized protein LOC100821534 [Brachypodium
distachyon]
Length = 261
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN LF++G+P DC RREVSH+FRPFVG++E+R++ KEPR G +VLCFV+F
Sbjct: 150 PLPPDASNTLFIEGIPNDCERREVSHIFRPFVGFKEVRLVTKEPRHPGGDPIVLCFVDFT 209
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF 169
+ A AM+AL GYKFD+ SP L++QFA F
Sbjct: 210 NAAQAAVAMEALQGYKFDEHDRTSPHLRLQFARF 243
>gi|115480273|ref|NP_001063730.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|52077323|dbj|BAD46364.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113631963|dbj|BAF25644.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|218202489|gb|EEC84916.1| hypothetical protein OsI_32115 [Oryza sativa Indica Group]
gi|222641953|gb|EEE70085.1| hypothetical protein OsJ_30081 [Oryza sativa Japonica Group]
Length = 235
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
ES L+V+GLP++CT+REV+H+FRPF G+RE+R+++KE R G +LCFV+F P A
Sbjct: 135 ESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGS-CNLLCFVDFSSPPEA 193
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDG 177
R A++ L GYKFD+ +S L+IQF+ P P G
Sbjct: 194 RAALETLQGYKFDEHDHESSNLRIQFSLTPRRRPIGG 230
>gi|222634952|gb|EEE65084.1| hypothetical protein OsJ_20123 [Oryza sativa Japonica Group]
Length = 180
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 102 LFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT 161
LFRPFVG+++IR++HKEPR + DRA VLCFVEF D KCA TAM+AL Y+FD++KPD+
Sbjct: 4 LFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAV 63
Query: 162 LKIQFAHFPFHLPSDGDEKCT 182
L I+FA +L +++CT
Sbjct: 64 LNIKFAR---NLEQQQNKECT 81
>gi|215707027|dbj|BAG93487.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 135
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ ES L+V+GLP++CT+REV+H+FRPF G+RE+R+++KE R G +LCFV+F P
Sbjct: 33 RTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGS-CNLLCFVDFSSPP 91
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
AR A++ L GYKFD+ +S L+ QF+ P
Sbjct: 92 EARAALETLQGYKFDEHDHESSNLRTQFSLTP 123
>gi|115480271|ref|NP_001063729.1| Os09g0527100 [Oryza sativa Japonica Group]
gi|113631962|dbj|BAF25643.1| Os09g0527100 [Oryza sativa Japonica Group]
Length = 149
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ ES L+V+GLP++CT+REV+H+FRPF G+RE+R+++KE R G +LCFV+F P
Sbjct: 47 RTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGS-CNLLCFVDFSSPP 105
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
AR A++ L GYKFD+ +S L+ QF+ P
Sbjct: 106 EARAALETLQGYKFDEHDHESSNLRTQFSLTP 137
>gi|218202488|gb|EEC84915.1| hypothetical protein OsI_32114 [Oryza sativa Indica Group]
gi|222641952|gb|EEE70084.1| hypothetical protein OsJ_30080 [Oryza sativa Japonica Group]
Length = 119
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ ES L+V+GLP++CT+REV+H+FRPF G+RE+R+++KE R G +LCFV+F P
Sbjct: 17 RTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGS-CNLLCFVDFSSPP 75
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
AR A++ L GYKFD+ +S L+ QF+ P
Sbjct: 76 EARAALETLQGYKFDEHDHESSNLRTQFSLTP 107
>gi|215693881|dbj|BAG89080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ ES L+V+GLP++CT+REV+H+FRPF G+RE+R+++KE R G +LCFV+F P
Sbjct: 17 RTESRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGS-CNLLCFVDFSSPP 75
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
AR A++ L GYKFD+ +S L+ QF+ P
Sbjct: 76 EARAALETLQGYKFDEHDHESSNLRTQFSLTP 107
>gi|302771087|ref|XP_002968962.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
gi|302816665|ref|XP_002990011.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300142322|gb|EFJ09024.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300163467|gb|EFJ30078.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
Length = 73
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 55/68 (80%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S LFVDGLP DCTRRE +H+FRPF+G++E+RV+HK+ +R +VLCFVEF DP+CA
Sbjct: 6 SATLFVDGLPIDCTRREAAHIFRPFIGFKEVRVVHKDAKRAVGEKIVLCFVEFADPRCAA 65
Query: 142 TAMDALHG 149
TA++AL G
Sbjct: 66 TALEALQG 73
>gi|147806465|emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]
Length = 337
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 16/112 (14%)
Query: 75 SPLKKGESNLLFVDGLPTDCTRREV----------------SHLFRPFVGYREIRVIHKE 118
+PL S+ L+V+GLP D TRREV S++FRPFVGY+E+R++ KE
Sbjct: 176 APLPPDASSTLYVEGLPPDSTRREVARILQDVITLPRNYCDSYIFRPFVGYKEVRLVSKE 235
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+ G +VLCFV+F P CA TA+ AL GYK + DS +++QF+ +P
Sbjct: 236 SKHRGRDPLVLCFVDFTSPACAATALSALQGYKIXEHDRDSAQMRLQFSQYP 287
>gi|357464013|ref|XP_003602288.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491336|gb|AES72539.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 243
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 57/70 (81%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G +N LFV+GLP++CTRREV+H+FRPFVGY+E+R++ KE R+ G ++LCFV+F P
Sbjct: 127 GATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLCFVDFVSPAH 186
Query: 140 ARTAMDALHG 149
A TAMDALHG
Sbjct: 187 AATAMDALHG 196
>gi|115466130|ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group]
gi|25553563|dbj|BAC24834.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|55295879|dbj|BAD67747.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113594704|dbj|BAF18578.1| Os06g0127500 [Oryza sativa Japonica Group]
Length = 293
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 28/122 (22%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHL----------------------------FRPFV 107
PL SN LF++G+PTDC RREVS + FRPFV
Sbjct: 156 PLPPDASNTLFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFV 215
Query: 108 GYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
G+RE+R++ KE R G ++LCFV+F+ A AMDAL GYKFD+ +SP L++QFA
Sbjct: 216 GFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFA 275
Query: 168 HF 169
F
Sbjct: 276 RF 277
>gi|125553883|gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indica Group]
Length = 227
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 28/122 (22%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHL----------------------------FRPFV 107
PL SN LF++G+PTDC RREVS + FRPFV
Sbjct: 90 PLPPDASNTLFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFV 149
Query: 108 GYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
G+RE+R++ KE R G ++LCFV+F+ A AMDAL GYKFD+ +SP L++QFA
Sbjct: 150 GFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFA 209
Query: 168 HF 169
F
Sbjct: 210 RF 211
>gi|255584574|ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis]
gi|223527202|gb|EEF29367.1| conserved hypothetical protein [Ricinus communis]
Length = 1031
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/160 (37%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 11 TAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLR 70
+ G G GM G+ + S + +L RDI P N + +R
Sbjct: 865 SVGFGRASGGGMTGLPILDSGMARRARPSGQDLASNGRDIGFVSQPPA----NKIARPVR 920
Query: 71 NNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLC 130
PL + S+ L+V+GLP RREV+H+FRPFVGY+E+R++ KE + ++LC
Sbjct: 921 ETV--PLPQDASSTLYVEGLPPGSKRREVAHIFRPFVGYKEVRLVSKESKNRTRDPIILC 978
Query: 131 FVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
FV+FDD CA TAM AL GYK D+ +S L++QF+ +P
Sbjct: 979 FVDFDDAACAATAMSALQGYKMDEHDCESSCLRLQFSRYP 1018
>gi|297850552|ref|XP_002893157.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
gi|297338999|gb|EFH69416.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 66 PSSLRNNAGS----PLKKGESNLLFVDGLPTDCTRRE-------VSHLFRPFVGYREIRV 114
PS R N + PL SN L+V+GLP++C+RRE +FRPFVGYRE+R+
Sbjct: 285 PSDFRPNGRAIGREPLPPDVSNTLYVEGLPSNCSRRENVLSCSLSLTVFRPFVGYREVRL 344
Query: 115 IHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+ K+ + +VLCFV+F++P CA TA+ AL GY+ D+ + D L++QF+ P
Sbjct: 345 VTKDSKHRSGDPVVLCFVDFENPACAATALSALQGYRMDEAESDFKILRLQFSRNP 400
>gi|162462145|ref|NP_001105534.1| meg5 protein [Zea mays]
gi|47078331|gb|AAT09814.1| MEG5 [Zea mays]
Length = 163
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+++GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 31 PLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 90
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPT 161
+P A A++AL G+ DD +P
Sbjct: 91 NPAQATIALEALQGHVTDDVNVSAPA 116
>gi|222634953|gb|EEE65085.1| hypothetical protein OsJ_20124 [Oryza sativa Japonica Group]
Length = 236
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 77/120 (64%), Gaps = 7/120 (5%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 60
++P A GL AG HP +G A + SPL DP L+ RR + G +IPD
Sbjct: 53 LQPRAYGLDGAAGAS-HPALAGLGGLAAGTTARGPSPLEDPALV--RRSSSLGKTASIPD 109
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPR 120
V + P L N G ++ ESN+LFVDGLPTDCTRREV+HLFRPFVG+++IR++HKEPR
Sbjct: 110 VEH--PRPLLNLDGP--REDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPR 165
>gi|326490583|dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+++GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 177 PLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 236
Query: 136 DPKCARTAMDALHG 149
P A A++AL G
Sbjct: 237 SPAQATIALEALQG 250
>gi|115477659|ref|NP_001062425.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|42408101|dbj|BAD09242.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|42408712|dbj|BAD09930.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113624394|dbj|BAF24339.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|215767903|dbj|BAH00132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 294
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL S+ L+V+GLP +CTRREVSH+FRPFVG+RE+R+++KE R G VLCFV+FD
Sbjct: 162 PLPADASSTLYVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 221
Query: 136 DPKCARTAMDALHG 149
+P A A++AL G
Sbjct: 222 NPAQATLALEALQG 235
>gi|293334753|ref|NP_001168219.1| hypothetical protein [Zea mays]
gi|223946801|gb|ACN27484.1| unknown [Zea mays]
gi|414591373|tpg|DAA41944.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 441
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 14/115 (12%)
Query: 59 PDVINGVPSSLRNNAGSP---LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVI 115
P++ NGVP G+P L +N ++V+GLP +CTRREV+H+FR ++G+ E+R++
Sbjct: 330 PNIHNGVPYF-----GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLV 384
Query: 116 HKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+K + LCFV+F P A AM L GYKFD++ P S L +QF+ P
Sbjct: 385 NKGSNKH------LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 433
>gi|224033783|gb|ACN35967.1| unknown [Zea mays]
Length = 331
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 14/115 (12%)
Query: 59 PDVINGVPSSLRNNAGSP---LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVI 115
P++ NGVP G+P L +N ++V+GLP +CTRREV+H+FR ++G+ E+R++
Sbjct: 220 PNIHNGVPYF-----GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLV 274
Query: 116 HKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+K + LCFV+F P A AM L GYKFD++ P S L +QF+ P
Sbjct: 275 NKGSNKH------LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 323
>gi|414591374|tpg|DAA41945.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 469
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 14/115 (12%)
Query: 59 PDVINGVPSSLRNNAGSP---LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVI 115
P++ NGVP G+P L +N ++V+GLP +CTRREV+H+FR ++G+ E+R++
Sbjct: 330 PNIHNGVPYF-----GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLV 384
Query: 116 HKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+K + LCFV+F P A AM L GYKFD++ P S L +QF+ P
Sbjct: 385 NKGSNKH------LCFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 433
>gi|242045360|ref|XP_002460551.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
gi|241923928|gb|EER97072.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
Length = 122
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDD 136
L + ++ ++V+GLPT+CTRREV+H+FR ++G+ +R+++K R LCFV+F
Sbjct: 27 LPRDATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLVNKGSNRH------LCFVDFAT 80
Query: 137 PKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
P A AM L GY+FD++ P S LK+QF+H P
Sbjct: 81 PAQAFLAMRTLQGYRFDEQDPHSRILKLQFSHSP 114
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 59 PDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE 118
P N +R+N +K ++ L+VDG+P D REV+H+FRP+ G++ +R+I K+
Sbjct: 9 PMFNNQYFELIRDNQQFQPQKDSTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQ 68
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
++ R +LCFV+FDD A M L GY+FD K D LKI FA+ P
Sbjct: 69 TQKG--REYLLCFVDFDDAFQATIVMQTLQGYRFD--KNDKTGLKIYFANNP 116
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 59 PDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE 118
P N +R+N +K ++ L+VDG+P D REV+H+FRP+ G++ +R+I K+
Sbjct: 9 PMFNNQYFELIRDNQQFQPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQ 68
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
++ R +LCFV+FDD A M L GY+FD K D LKI FA+ P
Sbjct: 69 TQKG--REYLLCFVDFDDALQATIVMQTLQGYRFD--KNDKTGLKIYFANNP 116
>gi|307109197|gb|EFN57435.1| hypothetical protein CHLNCDRAFT_142904 [Chlorella variabilis]
Length = 529
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Query: 54 INPTIPDVINGVPSSLRNNAGSPLKKGES-----NLLFVDGLPTDCTRREVSHLFRPFVG 108
+ PT P V+ G+P R +P + N L+++GLP+D TRRE+ H+FR G
Sbjct: 394 MQPTQPQVM-GMPGGQRGEILAPTAMRQYPPDACNTLYIEGLPSDVTRRELGHIFRSREG 452
Query: 109 YREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+R +R++ K+ ++ +V+ FVE+ A AMD L GY FD P++ T ++FA
Sbjct: 453 FRSLRLVIKDSKKHVGEKLVMAFVEYSSTYFAAQAMDTLQGYPFDLDNPETMTFFVKFA 511
>gi|229595477|ref|XP_001017208.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila]
gi|225565995|gb|EAR96963.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila
SB210]
Length = 616
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N L+VDG+P D REVSH+FRPF G++ +R+I K R R CFV+F+ +
Sbjct: 454 TNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRK--RTQAGREFYFCFVDFESALQST 511
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDE 179
A+ L GY+FD K D+ LKI +A+ P H P ++
Sbjct: 512 IALRTLQGYRFDKK--DTQGLKISYANEP-HQPKKQEQ 546
>gi|413953214|gb|AFW85863.1| nucleic acid binding protein [Zea mays]
Length = 248
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 5 ALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVING 64
A G G G +P + G++ +A + L R + G +IPDV +
Sbjct: 119 ATGGATARGSGALEDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIPDVEHH 178
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRT 122
SS+ N G + ESN+LFVD LPTDCTRREV+HLFR F G+++IRV+HKEPRR
Sbjct: 179 --SSIPNFDGP--SENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRV 232
>gi|384247133|gb|EIE20621.1| hypothetical protein COCSUDRAFT_83539 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ GLP T+REV+H+ RP G++E+R++ K R D ++ CF EF + A AM
Sbjct: 143 LFLSGLPLKITKREVAHILRPCEGFKELRLVQKVDRNNKD--VMWCFAEFSSKQLAARAM 200
Query: 145 DALHGYKFDDKKPDSPTLKIQFAH 168
+ L GY D DSPTL+I +A
Sbjct: 201 NDLQGYAVDLDDQDSPTLRISYAR 224
>gi|110430655|gb|ABG73445.1| RNA recognition motif family protein [Oryza brachyantha]
Length = 237
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 97 REVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKK 156
R+ S++FRPF G+RE+R+++KE R G R +LCFV+F P AR+A++ L GYKFD+
Sbjct: 154 RDASNIFRPFSGFREVRLVNKESRHAG-RYNLLCFVDFATPSEARSALETLQGYKFDEHD 212
Query: 157 PDSPTLKIQFA 167
S L+I+ +
Sbjct: 213 HQSSNLRIELS 223
>gi|403347348|gb|EJY73094.1| RRM domain containing protein [Oxytricha trifallax]
Length = 429
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 55 NPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV 114
N T+ + +N + S ++N P+ K +N ++V+GLP D T REV+H+FRPF+G++++R+
Sbjct: 288 NTTVINSLNRLSQSFKHNL--PIPKNATNTVYVEGLPHDTTEREVAHIFRPFLGFKQLRL 345
Query: 115 IHKEPRRTGDRAMV-LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
I PR T D V F +F+ ++ L GY+F K D L+ +A
Sbjct: 346 I---PRDTKDGQRVHFAFADFESVYQTTMVINTLQGYRF--HKDDIIGLQFSYA 394
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L+V+GLP D T REV+H+FR GY IR+ KE ++ R LC+VEF+ A A+
Sbjct: 237 LYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFNLCWVEFETKYNAAVAL 296
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
L GYK D K D+ L I +A
Sbjct: 297 HHLKGYKMD--KNDTKGLTISYA 317
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S LF+ +P + T E F GY R+ RR + V FVEF D K A
Sbjct: 45 STALFIAEIPLEVTEAEFRSTFSSEPGYISARL-----RRDRNENTV-GFVEFSDHKSAA 98
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAH 168
A + + +KF D + I FAH
Sbjct: 99 EAREQFNNFKFSHN--DDHGITIHFAH 123
>gi|303286151|ref|XP_003062365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455882|gb|EEH53184.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 107
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S L+++G+P D T RE++H+FRPF G++ R++ KE R LCF EF A
Sbjct: 16 SPTLYIEGVPHDATVREIAHIFRPFDGFQSTRLVKKENVRGP-----LCFAEFAGADLAF 70
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A++ L GY D P SP L+I FA
Sbjct: 71 AALNTLQGYVLDRDDPKSPALRIVFA 96
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVI-HKEPRRTGDRAMVLCFVEFDDPKCARTA 143
L + G+P D T RE+ H+FRPF G++ R++ K+P R LCF EF +P+ A A
Sbjct: 234 LHISGVPKDATVREICHIFRPFDGFQSARLVPSKDPERG-----PLCFAEFTNPELAFVA 288
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
++ L GY D PDS L I FA
Sbjct: 289 LETLEGYLIDRDDPDSSALHIAFA 312
>gi|8920632|gb|AAF81354.1|AC036104_3 Contains weak similarity to bab503 major core protein from Simian
T-cell lymphotrophic virus type 1 gb|AF230486
[Arabidopsis thaliana]
Length = 430
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 23/95 (24%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
PL SN L+V+GLP++C+RRE R+GD VLCFV+F+
Sbjct: 316 PLPPDVSNTLYVEGLPSNCSRRE----------------------RSGD-PTVLCFVDFE 352
Query: 136 DPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
+ CA TA+ AL Y+ D+ +PDS L++QF P
Sbjct: 353 NSACAATALSALQDYRMDEDEPDSKILRLQFFRNP 387
>gi|302844823|ref|XP_002953951.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
gi|300260763|gb|EFJ44980.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
Length = 817
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N L+++ LPTD T RE++H+FRPF G+ +R++ KE T FV+F D + A
Sbjct: 472 TNSLYLENLPTDVTHRELTHIFRPFAGFVTLRLVVKE--HTNREKSAKAFVDFTDAQAAT 529
Query: 142 TAMDALHGYKFD 153
AM AL+GY+ D
Sbjct: 530 AAMSALNGYQLD 541
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 17/113 (15%)
Query: 61 VINGVPS-SLRNNAGS--PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVI 115
+++GV SL A S PLKK E LFV GLP D RE+ LFRPF GY I++
Sbjct: 225 LLSGVSGPSLERGASSLVPLKK-EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLT 283
Query: 116 HKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
++P + FV FD A A +AL+G +FD + P TL+++FA
Sbjct: 284 ARQP---------VGFVIFDSRAGAEAAKNALNGIRFDPENPQ--TLRLEFAK 325
>gi|403345552|gb|EJY72148.1| hypothetical protein OXYTRI_06855 [Oxytricha trifallax]
Length = 425
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 87/162 (53%), Gaps = 23/162 (14%)
Query: 21 GMVGITAVASVKGYSSPLPDPNLIGQRRDI-APGINPTIPDVINGVPSSLRNNAGSPLKK 79
G+ G + A+ S + +P ++GQ+ + + N + D I+ + S N P+ K
Sbjct: 259 GLSGQSGSAATS--HSHIQNPLMMGQQMNQPSHSQNAKLQDSISRIHSIFGPNI-MPIPK 315
Query: 80 GESNLLFVDGLPTDCTRREV-----SH--------LFRPFVGYREIRVIHKEPRRTGDRA 126
+N ++V+G+P D + REV SH +FRP+ G++ +R+I +E ++ G++
Sbjct: 316 NATNTVYVEGIPLDASEREVARKILSHFYQSFSLDIFRPYPGFKSVRLIPRE-KKPGEK- 373
Query: 127 MVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
++ CF +F++ ++ L GY+FD K D L +QF++
Sbjct: 374 VIFCFADFENAFQTTLVINTLQGYRFD--KDD--ILGLQFSY 411
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 23/109 (21%)
Query: 71 NNAGSPLKK---GESNL-------LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKE 118
NN+G K+ GE+NL LFV GLP D RE+ LFRPF GY I++ K+
Sbjct: 2 NNSGKAEKENTPGEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
P + FV FD A A +AL+G +FD + P TL+++FA
Sbjct: 62 P---------VGFVSFDSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+I+FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRIEFA 99
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLPTD RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 18 EVRTLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRS 68
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 69 GAEAAKNALNGVRFDPENPQ--TLRLEFA 95
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|359806644|ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
gi|255647802|gb|ACU24361.1| unknown [Glycine max]
Length = 232
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 63 NGVPS-SLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRR 121
NG P+ S R G+ +N+LF++ LP + T R + LF + G++E+R+I +P
Sbjct: 137 NGGPTASFRQGPGAQETAAPNNILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEAKPG- 195
Query: 122 TGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ FV+F+D + AM ALHG+K + P
Sbjct: 196 -------IAFVDFEDEVQSSMAMQALHGFKITPQNP 224
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 63 NGVPSSLRNNAGSP-LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEP 119
NGV + N L++ E LFV GLP D RE+ LFRPF GY I++ K+P
Sbjct: 3 NGVKAEKENTPNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP 62
Query: 120 RRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FV FD A A +AL+G +FD + P TL+++FA
Sbjct: 63 ---------VGFVSFDSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 23/109 (21%)
Query: 71 NNAGSPLKK---GESNL-------LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKE 118
NN+G K+ GE+NL LFV GLP D RE+ LFRPF GY I++ K+
Sbjct: 2 NNSGKAEKENTPGEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 61
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
P + FV FD A A +AL+G +FD + P TL+++FA
Sbjct: 62 P---------VGFVSFDSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 17 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 67
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 68 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 98
>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]
Length = 183
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVI 115
PL SN L+++GLP D +RREV+H+FRPFVGY+E+R++
Sbjct: 144 PLPPDASNTLYIEGLPADSSRREVAHIFRPFVGYKEVRLV 183
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 13/94 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFAK 100
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCF 131
GSPL++ E LFV GLP D RE+ LFRPF GY I++ ++P + F
Sbjct: 17 GSPLEE-EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGF 66
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
V FD A A +AL+G +FD + P TL+++FA
Sbjct: 67 VIFDSRAGAEAAKNALNGIRFDPENPQ--TLRLEFA 100
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCF 131
GSPL++ E LFV GLP D RE+ LFRPF GY I++ ++P + F
Sbjct: 17 GSPLEE-EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGF 66
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
V FD A A +AL+G +FD + P TL+++FA
Sbjct: 67 VIFDSRAGAEAAKNALNGIRFDPENPQ--TLRLEFA 100
>gi|422294869|gb|EKU22169.1| U2 small nuclear ribonucleoprotein B'', partial [Nannochloropsis
gaditana CCMP526]
Length = 289
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 73 AGSPLKKGE-SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
AG L GE S++L LPT+CT ++ LFR F G+ EIR+ G R + F
Sbjct: 205 AGMALAAGEVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRL-------AGQRG--IAF 255
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+EF D ARTA A +G+K + LK+ +A
Sbjct: 256 IEFRDEVSARTAFQAYNGFKLS----QTDALKLTYA 287
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+
Sbjct: 19 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRT 69
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 70 GAEAAKNALNGIRFDPESPQ--TLRLEFA 96
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
LKK + LFV GLP D RE+ LFRPF GY I++ ++P + FV F
Sbjct: 4 LKKKKVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIF 54
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 55 DSRAGAEAAKNALNGIRFDPENPQ--TLRLEFA 85
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 73 AGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLC 130
A + L + E LFV GLP D RE+ LFRPF GY I++ K+P +
Sbjct: 13 ADTSLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VG 63
Query: 131 FVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
FV FD A A +AL+G +FD + P TL+++FA
Sbjct: 64 FVSFDSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFAK 99
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEF 134
L + E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 76 LTEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 126
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 127 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 157
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 13/94 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFAK 100
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 31 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRA 81
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 82 GAEAAKNALNGIRFDPENPQ--TLRLEFA 108
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+ A
Sbjct: 22 LFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRAGAEA 72
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 73 AKNALNGIRFDPENPQ--TLRLEFA 95
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 69 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 99
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 18 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRS 68
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 69 GAEAAKNALNGIRFDPESPQ--TLRLEFA 95
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 18 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRS 68
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 69 GAEAAKNALNGIRFDPESPQ--TLRLEFA 95
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 2 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRA 52
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 53 GAEAAKNALNGIRFDPENPQ--TLRLEFA 79
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 88 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRS 138
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 139 GAEAAKNALNGIRFDPENPQ--TLRLEFA 165
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 20 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRA 70
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 71 GAEAAKNALNGIRFDPENPQ--TLRLEFA 97
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L + E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 17 LPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 67
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 68 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 98
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 4 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRSGAEA 54
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 55 AKNALNGIRFDPENPQ--TLRLEFA 77
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+ A
Sbjct: 22 LFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRAGAEA 72
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 73 AKNALNGIRFDPENPQ--TLRLEFA 95
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 60 DVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEP 119
D I P + NNA K+ E LFV GLP D +RE+ LFR F GY E +I +
Sbjct: 63 DRITMNPDTNNNNA----KEEEVRTLFVSGLPADAKKRELYLLFRGFTGY-EGSII-RTT 116
Query: 120 RRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ G + + FV FD A A ++L G KFD + P TL+++FA
Sbjct: 117 AKPGKAPVPVGFVTFDSRGEADLAKNSLQGIKFDPELPH--TLRLEFA 162
>gi|297724471|ref|NP_001174599.1| Os06g0148000 [Oryza sativa Japonica Group]
gi|55297048|dbj|BAD68617.1| unknown protein [Oryza sativa Japonica Group]
gi|55297147|dbj|BAD68790.1| unknown protein [Oryza sativa Japonica Group]
gi|215765432|dbj|BAG87129.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676715|dbj|BAH93327.1| Os06g0148000 [Oryza sativa Japonica Group]
Length = 150
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 1 MRPGALGLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD 60
++P A GL AG HP +G A + SPL DP L+ RR + G +IPD
Sbjct: 53 LQPRAYGLDGAAGAS-HPALAGLGGLAAGTTARGPSPLEDPALV--RRSSSLGKTASIPD 109
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLF 103
V + P L N G ++ ESN+LFVDGLPTDCTRREV+ +
Sbjct: 110 VEH--PRPLLNLDGP--REDESNILFVDGLPTDCTRREVARIL 148
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+ A
Sbjct: 22 LFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRAGAEA 72
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 73 AKNALNGIRFDPENPQ--TLRLEFA 95
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+ A
Sbjct: 4 LFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRAGAEA 54
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 55 AKNALNGIRFDPENPQ--TLRLEFA 77
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEF 134
L + E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 17 LPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 67
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
D A A +AL+G +FD + P TL+++FA
Sbjct: 68 DSRSEAEAAKNALNGIRFDPEIPQ--TLRLEFA 98
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 68 SLRNNAGSP--LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTG 123
+LR SP G LFV GLP D RE+ LFRPF GY I++ ++P
Sbjct: 102 ALREGLASPHLCALGSVRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSRQP---- 157
Query: 124 DRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FV FD A A +AL+G +FD + P TL+++FA
Sbjct: 158 -----VGFVIFDSRAGAEVAKNALNGIRFDPENPQ--TLRLEFA 194
>gi|357491327|ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|355517286|gb|AES98909.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
Length = 233
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 64 GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
G +S R +G+ +N+LF++ LP + T R + LF + G++E+R+I +P
Sbjct: 140 GSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG--- 196
Query: 124 DRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ FV+F+D + AM AL G+K + P
Sbjct: 197 -----IAFVDFEDDGQSSMAMQALQGFKITPQNP 225
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+ A
Sbjct: 22 LFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRAGAEA 72
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 73 AKNALNGIRFDPENPQ--TLRLEFA 95
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 59 PDVINGVPSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK 117
P NG P+S R N + +N+LF+ LP + T + LF+ + G+RE+R+I
Sbjct: 134 PAESNGGPTSFRQGNQSAQETVPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEA 193
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT 161
+P + FVEF+D + AM AL G+K + P + T
Sbjct: 194 KPG--------IAFVEFEDDVQSSMAMQALQGFKITPQNPMAIT 229
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+
Sbjct: 20 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRT 70
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 71 GAEAAKNALNGIRFDPECPQ--TLRLEFA 97
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV LP D T REVS LFR G+ IR+I+KE + + +CF +F D + A A+
Sbjct: 247 LFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGK------LPMCFCDFVDSQSAAMAL 300
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
D L G++ D K S ++ I+F
Sbjct: 301 DFLQGFRMDPKDI-SSSISIEF 321
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 4 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 54
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 55 AKNALNGIRFDPEIPQ--TLRLEFA 77
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 4 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRAGAEA 54
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 55 AKNALNGIRFDPENPQ--TLRLEFA 77
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 28 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRAGAEA 78
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 79 AKNALNGIRFDPENPQ--TLRLEFA 101
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 16 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 66
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 67 AKNALNGIRFDPEIPQ--TLRLEFA 89
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 21 EVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRS 71
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 72 EAEAAKNALNGVRFDPEIPQ--TLRLEFA 98
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 31 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRAGAEA 81
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 82 AKNALNGIRFDPENPQ--TLRLEFA 104
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 18 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 68
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAH 168
A +AL+G +FD + P TL+++FA
Sbjct: 69 AKNALNGIRFDPEIPQ--TLRLEFAK 92
>gi|449439191|ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
gi|449520549|ref|XP_004167296.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
Length = 231
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 64 GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
G ++ R+ S + +N+LF++ LP + + + LF+ + G+RE+R+I +P
Sbjct: 138 GSNATFRHANPSATEATPNNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAKPG--- 194
Query: 124 DRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FVEF+D + AM AL G+K D + P + I FA
Sbjct: 195 -----IAFVEFEDDVQSSMAMQALQGFKIDPQHP----MAISFA 229
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 83 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRS 133
Query: 139 CARTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A A +AL+G +FD P+SP TL+++FA
Sbjct: 134 GAEAAKNALNGIRFD---PESPQTLRLEFA 160
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 63 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 113
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 114 AKNALNGIRFDPEIPQ--TLRLEFA 136
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 146 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRA 196
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 197 GAEAAKNALNGIRFDPENPQ--TLRLEFA 223
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 16 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 66
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAH 168
A +AL+G +FD + P TL+++FA
Sbjct: 67 AKNALNGIRFDPEIPQ--TLRLEFAK 90
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 43 LIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHL 102
R + AP + P P + SP++ LFV GLP D RE+ L
Sbjct: 82 WWASRAESAPRLLPARPSFSTLAWPATFFRGASPVRT-----LFVSGLPVDIKPRELYLL 136
Query: 103 FRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSP 160
FRPF GY I++ ++P + FV FD A A +AL+G +FD + P
Sbjct: 137 FRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEAAKNALNGIRFDPENPQ-- 185
Query: 161 TLKIQFA 167
TL+++FA
Sbjct: 186 TLRLEFA 192
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 21 EVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRS 71
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 72 EAEAAKNALNGVRFDPEIPQ--TLRLEFA 98
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 4 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 54
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 55 AKNALNGIRFDPEIPQ--TLRLEFA 77
>gi|388501866|gb|AFK38999.1| unknown [Medicago truncatula]
Length = 234
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 67 SSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA 126
+S R +G+ +N+LF++ LP + T R + LF + G++E+R+I +P
Sbjct: 144 ASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG------ 197
Query: 127 MVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ FV+F+D + AM AL G+K + P
Sbjct: 198 --IAFVDFEDDGQSSMAMQALQGFKITPQNP 226
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 10 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 60
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 61 AKNALNGIRFDPEIPQ--TLRLEFA 83
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD
Sbjct: 21 EVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRS 71
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 72 EAEAAKNALNGVRFDPEIPQ--TLRLEFA 98
>gi|351726226|ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
gi|255627621|gb|ACU14155.1| unknown [Glycine max]
Length = 232
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 63 NGVPS-SLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRR 121
NG P+ S R G+ +N+LF++ LP + T R + LF + G++E+ +I +P
Sbjct: 137 NGGPTASFRQGPGAQEAAAPNNILFIENLPHETTGRMLEMLFEQYPGFKEVCLIEAKPG- 195
Query: 122 TGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ FV+F+D + AM ALHG+K + P
Sbjct: 196 -------IAFVDFEDEVQSSMAMQALHGFKITPQNP 224
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 82 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 132
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 133 AKNALNGIRFDPEIPQ--TLRLEFA 155
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 94 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 144
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 145 AKNALNGIRFDPENPQ--TLRLEFA 167
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 5 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 55
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 56 AKNALNGIRFDPENPQ--TLRLEFA 78
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 33 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRA 83
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 84 GAEAAKNALNGIRFDPENPQ--TLRLEFA 110
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 5 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 55
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 56 AKNALNGIRFDPEIPQ--TLRLEFA 78
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 7 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 57
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 58 AKNALNGIRFDPEIPQ--TLRLEFA 80
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 75 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 125
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 126 AKNALNGIRFDPEIPQ--TLRLEFA 148
>gi|169589|gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
Length = 231
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G+RE+R+I +P + FVEFDD +
Sbjct: 156 NNILFIQNLPHETTSMMLEVLFKQYPGFREVRMIEAKPG--------IAFVEFDDDVQSS 207
Query: 142 TAMDALHGYKFDDKKPDSPT 161
AM AL G+K + P + T
Sbjct: 208 VAMQALQGFKITPQNPMAIT 227
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 5 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 55
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 56 AKNALNGIRFDPEIPQ--TLRLEFA 78
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 65 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 115
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 116 AKNALNGIRFDPEIPQ--TLRLEFA 138
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 29 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRA 79
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 80 GAEAAKNALNGIRFDPENPQ--TLRLEFA 106
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 14/94 (14%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVE 133
PL++ E LFV GLP D RE+ LFRPF GY I++ ++P + FV
Sbjct: 25 PLEE-EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVI 74
Query: 134 FDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
FD A A +AL+G +FD + P TL+++FA
Sbjct: 75 FDSRAGAEAAKNALNGIRFDPENPQ--TLRLEFA 106
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 79 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRAGAEA 129
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 130 AKNALNGIRFDPENPQ--TLRLEFA 152
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 29 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRA 79
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 80 GAEAAKNALNGIRFDPENPQ--TLRLEFA 106
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 4 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 54
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 55 AKNALNGIRFDPEIPQ--TLRLEFA 77
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 29 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRA 79
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 80 GAEAAKNALNGIRFDPENPQ--TLRLEFA 106
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 29 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRA 79
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 80 GAEAAKNALNGIRFDPENPQ--TLRLEFA 106
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 58 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRA 108
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 109 GAEAAKNALNGIRFDPENPQ--TLRLEFA 135
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 8 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 58
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 59 AKNALNGIRFDPENPQ--TLRLEFA 81
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 15/86 (17%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 4 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 54
Query: 143 AMDALHGYKFDDKKPDSP-TLKIQFA 167
A +AL+G +FD PD+P TL+++FA
Sbjct: 55 AKNALNGIRFD---PDNPQTLRLEFA 77
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 34 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRA 84
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 85 GAEAAKNALNGIRFDPENPQ--TLRLEFA 111
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 5 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 55
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 56 AKNALNGIRFDPENPQ--TLRLEFA 78
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ ++P + FV FD
Sbjct: 31 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRA 81
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A A +AL+G +FD + P TL+++FA
Sbjct: 82 GAEAAKNALNGIRFDPENPQ--TLRLEFA 108
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 28 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 78
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 79 AKNALNGIRFDPENPQ--TLRLEFA 101
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 5 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRAGAEA 55
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 56 AKNALNGIRFDPENPQ--TLRLEFA 78
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 8 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 58
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 59 AKNALNGIRFDPENPQ--TLRLEFA 81
>gi|328774045|gb|EGF84082.1| hypothetical protein BATDEDRAFT_84797 [Batrachochytrium
dendrobatidis JAM81]
Length = 262
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LPTD T +S LF F G++E+R++ P R+ + FVE+ + +
Sbjct: 186 NSILFIQNLPTDITNASLSALFNQFPGFKEVRLV---PGRSD-----IAFVEYHNEMHSA 237
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A ALHGY+ P+ +K+ FA
Sbjct: 238 IAKQALHGYRL---LPEQEEIKVTFA 260
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 54 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRAGAEA 104
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 105 AKNALNGIRFDPENPQ--TLRLEFA 127
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 5 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRAGAEA 55
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 56 AKNALNGIRFDPENPQ--TLRLEFA 78
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 110 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 160
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 161 AKNALNGIRFDPENPQ--TLRLEFA 183
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D REV LFR F GY +++ K+P + FV F++ CA
Sbjct: 4 LFVSGLPLDVKPREVYLLFRSFKGYEGSLLKLTDKQP---------VAFVTFENKDCASD 54
Query: 143 AMDALHGYKFDDKKPD-SPTLKIQFAH 168
A L G +FD PD S TL+++FA
Sbjct: 55 AKSELQGVQFD---PDVSQTLRLEFAK 78
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 38 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQP---------VGFVIFDSRAGAEA 88
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 89 AKNALNGIRFDPENPQ--TLRLEFA 111
>gi|255083026|ref|XP_002504499.1| predicted protein [Micromonas sp. RCC299]
gi|226519767|gb|ACO65757.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 60 DVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEP 119
D +GV + +R + +P + +LFV GLP T +S LF+ F G++E+R++ +P
Sbjct: 131 DAASGVTAKVRTDPSAP----PNEILFVQGLPGATTAAMLSMLFQQFPGFKEVRMVEAKP 186
Query: 120 RRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFD 153
+ FVEF+ A A+ L G+K +
Sbjct: 187 G--------IAFVEFETDAQASVALSGLQGFKIN 212
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 33 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 83
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAH 168
A +AL+G +FD + P TL+++FA
Sbjct: 84 AKNALNGIRFDPEIPQ--TLRLEFAK 107
>gi|242036017|ref|XP_002465403.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
gi|241919257|gb|EER92401.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
Length = 233
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP T + LF+ + G+RE+R+I +P + FVEF+D +
Sbjct: 158 NNILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG--------IAFVEFEDDSQSM 209
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 210 VAMQALQGFKITPENP 225
>gi|255553401|ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223543140|gb|EEF44674.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 233
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 63 NGVPSSLRNNAGSPLKKGE---------SNLLFVDGLPTDCTRREVSHLFRPFVGYREIR 113
NG S++ N +P ++G +N+LF+ LP + T + LF+ + G+RE+R
Sbjct: 131 NGT-STVNNRGTAPFRQGNRGEQEAAPPNNILFIQNLPHETTSMMLQVLFQQYPGFREVR 189
Query: 114 VIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT 161
+I +P + FVEF+D + AM AL +K + P + T
Sbjct: 190 MIEAKPG--------IAFVEFEDDVQSSMAMQALQSFKITPQNPMAIT 229
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 27 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 77
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 78 AKNALNGIRFDPENPQ--TLRLEFA 100
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 6 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 56
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 57 AKNALNGIRFDPENPQ--TLRLEFA 79
>gi|225434417|ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
gi|297745807|emb|CBI15863.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP T + LF+ + G+RE+R+I +P + FVEF+D +
Sbjct: 159 NNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAKPG--------IAFVEFEDDVQSS 210
Query: 142 TAMDALHGYKFDDKKP 157
AM+AL G+K + P
Sbjct: 211 MAMEALQGFKITPQNP 226
>gi|116781538|gb|ABK22144.1| unknown [Picea sitchensis]
Length = 235
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G++E+R+I +P + FVE+ D A
Sbjct: 160 NNILFIQNLPHETTTMMLQMLFQQYPGFKEVRMIEAKPG--------IAFVEYGDEMQAS 211
Query: 142 TAMDALHGYKFDDKKPDSPTL 162
AM AL G+K P +P L
Sbjct: 212 VAMQALQGFKIT---PQNPML 229
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LF+ GLP D RE+ +LFR F GYR ++ R + V F F D + A
Sbjct: 81 EVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQL-----RNSEGGTQVYAFTVFTDQQSA 135
Query: 141 RTAMDALHGYKFD 153
AM AL+G FD
Sbjct: 136 LAAMHALNGMDFD 148
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ ++P + FV FD A
Sbjct: 28 LFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEA 78
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL+G +FD + P TL+++FA
Sbjct: 79 AKNALNGIRFDPENPQ--TLRLEFA 101
>gi|384950746|sp|B8AM21.1|RU2B_ORYSI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|218192634|gb|EEC75061.1| hypothetical protein OsI_11177 [Oryza sativa Indica Group]
Length = 232
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G+RE+R+I +P + FVE++D +
Sbjct: 157 NNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPG--------IAFVEYEDDSQSM 208
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K P
Sbjct: 209 VAMQALQGFKITPYNP 224
>gi|226531516|ref|NP_001149883.1| spliceosomal protein [Zea mays]
gi|194696844|gb|ACF82506.1| unknown [Zea mays]
gi|195635261|gb|ACG37099.1| spliceosomal protein [Zea mays]
gi|195659375|gb|ACG49155.1| spliceosomal protein [Zea mays]
gi|413956009|gb|AFW88658.1| Spliceosomal protein [Zea mays]
Length = 233
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP T + LF+ + G+RE+R+I +P + FVEF+D +
Sbjct: 158 NNILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG--------IAFVEFEDDGQSM 209
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 210 VAMQALQGFKITPENP 225
>gi|108707670|gb|ABF95465.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 231
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G+RE+R+I +P + FVE++D +
Sbjct: 156 NNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPG--------IAFVEYEDDSQSM 207
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K P
Sbjct: 208 VAMQALQGFKITPYNP 223
>gi|115452491|ref|NP_001049846.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|122247158|sp|Q10MR0.1|RU2B_ORYSJ RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|108707669|gb|ABF95464.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548317|dbj|BAF11760.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|215737098|dbj|BAG96027.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624757|gb|EEE58889.1| hypothetical protein OsJ_10509 [Oryza sativa Japonica Group]
Length = 232
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G+RE+R+I +P + FVE++D +
Sbjct: 157 NNILFIQNLPAETTSMMLQILFQQYPGFREVRMIEAKPG--------IAFVEYEDDSQSM 208
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K P
Sbjct: 209 VAMQALQGFKITPYNP 224
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV--LCFVEFDDPK 138
E LFV GLP+D +RE+ LFRP+ G+ + K P++ G + + FV F
Sbjct: 61 EVRTLFVSGLPSDVKQRELRLLFRPYKGFES--AVLKFPQKPGKVYPIAPVAFVTFKSKA 118
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A+ + L G KFD+ P TL+++FA
Sbjct: 119 EAQVPKEELQGEKFDNDNPT--TLRLEFA 145
>gi|293333676|ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea mays]
gi|224029017|gb|ACN33584.1| unknown [Zea mays]
gi|414866361|tpg|DAA44918.1| TPA: hypothetical protein ZEAMMB73_448604 [Zea mays]
Length = 233
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP T + LF+ + G+RE+R+I +P + FVEF+D +
Sbjct: 158 NNILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAKPG--------IAFVEFEDDGQSM 209
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 210 VAMQALQGFKITPENP 225
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 86 FVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
FV GLP D RE+ LFRPF GY I++ ++P + FV FD A A
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQP---------VGFVIFDSRAGAEAA 51
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
+AL+G +FD + P TL+++FA
Sbjct: 52 KNALNGIRFDPENPQ--TLRLEFA 73
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 45 GQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFR 104
QR + A G + P NGVP+ +G +N+LF+ LP + T + LF
Sbjct: 121 SQRPNTANGPSANGPSANNGVPAPSFQPSGQETMP-PNNILFIQNLPHETTSMMLQLLFE 179
Query: 105 PFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ G++EIR+I +P + FVE++D A AM L G+K + P
Sbjct: 180 QYPGFKEIRMIDAKPG--------IAFVEYEDDVQASIAMQPLQGFKITPQNP 224
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 63 NGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRT 122
G+P L LK S L FV LP D T RE+S LFR G+ +R++ +E +
Sbjct: 252 TGMPYFLPTRPSYDLKDACSTL-FVSNLPKDVTERELSILFRFMRGFINVRLVQREGK-- 308
Query: 123 GDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLP 174
+CF +F D A AM+ L+G+K D K S ++ I+F H P
Sbjct: 309 ----YPICFCDFRDTLSAAGAMEMLNGFKMDTKDI-SSSISIEFDKSRTHRP 355
>gi|224068352|ref|XP_002302719.1| predicted protein [Populus trichocarpa]
gi|222844445|gb|EEE81992.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G++E+R++ +P + FVE+ D +
Sbjct: 177 NNILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETKPG--------IAFVEYGDEMQST 228
Query: 142 TAMDALHGYKFDD 154
AM AL G+K
Sbjct: 229 VAMHALQGFKLQQ 241
>gi|326512082|dbj|BAJ96022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP T + LF+ + G+RE+R+I +P + FVE++D +
Sbjct: 158 NNILFLQNLPDQTTSVMLQILFQQYPGFREVRMIEAKPG--------IAFVEYEDENQSM 209
Query: 142 TAMDALHGYKFDDKKP 157
AM+AL G+K + P
Sbjct: 210 VAMEALQGFKISPENP 225
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 45 GQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFR 104
QR + A G + P NGVP+ +G +N+LF+ LP + T + LF
Sbjct: 121 SQRPNTANGPSANGPSANNGVPAPSFQPSGQETMPP-NNILFIQNLPHETTSMMLQLLFE 179
Query: 105 PFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ G++EIR+I +P + FVE++D A AM L G+K + P
Sbjct: 180 QYPGFKEIRMIDAKPG--------IAFVEYEDDVQASIAMQPLQGFKITPQNP 224
>gi|348683636|gb|EGZ23451.1| hypothetical protein PHYSODRAFT_484798 [Phytophthora sojae]
Length = 236
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF++ LP C + +S LF+ + G++E+R++ P + G L FVEF D A
Sbjct: 161 NKILFLEALPESCNKEMLSVLFKQYQGFKEVRMV---PGKKG-----LAFVEFGDEAQAA 212
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A+ L G+K +PT LK+ FA
Sbjct: 213 IALQGLFGFKL------TPTDALKVSFA 234
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV--LCFVEFDDPK 138
E LFV GLP+D +RE+ LFRP+ G+ + K P++ G + + FV F
Sbjct: 78 EVRTLFVSGLPSDVKQRELRLLFRPYKGFES--AVLKFPQKPGKVYPIAPVAFVTFKSKA 135
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A+ + L G KFD+ P TL+++FA
Sbjct: 136 EAQVPKEELQGEKFDNDNPT--TLRLEFA 162
>gi|50288333|ref|XP_446595.1| hypothetical protein [Candida glabrata CBS 138]
gi|42557534|emb|CAE84437.1| putative Whi3 protein [Candida glabrata]
gi|49525903|emb|CAG59522.1| unnamed protein product [Candida glabrata]
Length = 671
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K TG +CFVEFDD CA
Sbjct: 544 NTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPMCFVEFDDVSCATR 603
Query: 143 AMDALHGYKF 152
A+ L+G +
Sbjct: 604 ALVELYGSQL 613
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+G +++LFV+ LP V LF+ F G++E+R++ +P + FVE+ D
Sbjct: 157 RGPNHILFVENLPGTANEAMVGMLFQQFTGFKEVRMVPAKPG--------IAFVEYSDEG 208
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
A AM L G+K KP + I FA+
Sbjct: 209 QAGVAMQGLQGFKLATDKP----MAISFAN 234
>gi|357112644|ref|XP_003558118.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Brachypodium distachyon]
Length = 233
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 52 PGIN-PTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
PG N P P + G +S A + +LF+ LP T + LFR + G+
Sbjct: 127 PGPNAPVAPSNVTGYQASRFGKAPQEPPAPPNKILFIQNLPDQTTSMMLQLLFRQYPGFW 186
Query: 111 EIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
E+R+I +P + FVEF+D + AM AL G+K + P
Sbjct: 187 EVRMIEAKPG--------IAFVEFEDESQSMVAMQALQGFKISPENP 225
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 44 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 97
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A T M AL+G FD +K TL I A
Sbjct: 98 SAVTVMHALNGMVFDLEKYS--TLHIDLA 124
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 45 GQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFR 104
QR + A G + P NGVP+ +G +N+LF+ LP + T + LF
Sbjct: 121 SQRPNTANGPSANGPSANNGVPAPSFPPSGQE-AMPPNNILFIQNLPHETTSMMLQLLFE 179
Query: 105 PFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
+ G++EIR+I +P + FVE++D A AM L G+K + P
Sbjct: 180 QYPGFKEIRMIDAKPG--------IAFVEYEDDVQASIAMQPLQGFKITPQNP 224
>gi|357465777|ref|XP_003603173.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492221|gb|AES73424.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 173
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 7 GLVDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVI--NG 64
G+ DT G VH E +PL D +L +RD G++ +PD I N
Sbjct: 66 GVDDTRGSRVHSEHNATSY----------NPLEDVDL-STKRDALLGVSTGVPDPIANNE 114
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLF 103
S N P+ ESN+LFV GLP DCTRREV +
Sbjct: 115 RSISKSNYDALPVSAAESNILFVGGLPKDCTRREVGRIL 153
>gi|342321005|gb|EGU12943.1| RNA binding protein [Rhodotorula glutinis ATCC 204091]
Length = 298
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D T+ + LFRPF E+R I P R + FVEF D + +
Sbjct: 211 NKILFVQNLPDDTTKEGLEALFRPFPNLVEVRTI---PGRKN-----IAFVEFADEQSSG 262
Query: 142 TAMDALHGYKF 152
A DALH KF
Sbjct: 263 VARDALHNTKF 273
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F +
Sbjct: 34 GAINTLFVSGLPNDVKAREIHNLFRRRYGFESCQLKY-----TGRGDQVVAFATFTSHRF 88
Query: 140 ARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A AM+ L+G KFD + TL I+ A
Sbjct: 89 AMAAMNELNGVKFDPQT--GSTLHIELA 114
>gi|168028479|ref|XP_001766755.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681964|gb|EDQ68386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 235
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF+ F G++E+R+I +P + FVEF D A
Sbjct: 160 NNILFVQNLPHEATSLAIQVLFQQFPGFKEVRMIEAKPG--------IAFVEFGDELQAT 211
Query: 142 TAMDALHGYK 151
A+ LH +K
Sbjct: 212 VALQGLHNFK 221
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E+N LFV GLP D ++ E+ +FRPF G + +R++ RR G + L +VEF+D A
Sbjct: 626 ETNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLV---CRRDG-KPKGLAYVEFEDDASA 680
Query: 141 RTAMDALHGYKFDD 154
+ AM+ G D
Sbjct: 681 KKAMEKTDGMTVGD 694
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E+N LFV GLP D ++ E+ +FRPF G + +R++ RR G + L +VEF+D A
Sbjct: 616 ETNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLV---CRRDG-KPKGLAYVEFEDDASA 670
Query: 141 RTAMDALHGYKFDD 154
+ AM+ G D
Sbjct: 671 KKAMEKTDGMTVGD 684
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +FR + GY+ + K + G +A + FV F++ +
Sbjct: 23 QQEVRTLFVSGLPMDTKPREIYLMFRSYSGYQG--SLLKLTGKEGKKATPVAFVTFENRE 80
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A L G +FD + P S ++I+FA
Sbjct: 81 QAEVCKAELQGIRFDPELPTS--IRIEFA 107
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I+ K+P + FV F A
Sbjct: 23 LFVSGLPMDIKPRELYLLFRPFQGYEGSLIKFTSKQP---------VGFVSFSSRSEAEA 73
Query: 143 AMDALHGYKFDDKKPDSP-TLKIQFA 167
A + L+G +FD PD P TL+++FA
Sbjct: 74 AKNRLNGVRFD---PDVPQTLRLEFA 96
>gi|156402885|ref|XP_001639820.1| predicted protein [Nematostella vectensis]
gi|156226951|gb|EDO47757.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T +S LF F G++E+R++ P R+ + FVEF++ A
Sbjct: 134 NNILFLTNLPMETTELMLSMLFNQFPGFKEVRLV---PGRSD-----ISFVEFENEVQAG 185
Query: 142 TAMDALHGYK 151
TA DAL G++
Sbjct: 186 TAKDALQGFR 195
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 77 LKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
L+ GE N +LF+ G+P DC+ +++ LF F GY+E R+ + R + FVEF+
Sbjct: 169 LQVGEPNHVLFIAGIPQDCSLQQLESLFVQFPGYKETRLAAGQER--------VAFVEFE 220
Query: 136 DPKCARTAMDALHGYKFDD 154
A A+ + G++ +
Sbjct: 221 TEDQATVALQGMQGFRISE 239
>gi|260827881|ref|XP_002608892.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
gi|229294246|gb|EEN64902.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
Length = 256
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T +S LF F G++E+R++ P R + FVEFD+ +
Sbjct: 181 NNILFLTNLPEETTEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEMQSG 232
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A DAL G+K +PT +KI FA
Sbjct: 233 AARDALQGFKI------TPTHAMKISFA 254
>gi|403373310|gb|EJY86574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 303
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 68 SLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFV--GYREIRVIHKEPRRTGD 124
S++ AG + ESN LLF++GL ++ +F V G++E+R I ++
Sbjct: 208 SIQKIAGFSVNGQESNNLLFIEGLSKRTPTSILNEIFSQAVIGGFKEVRHIAEKE----- 262
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FVE++D A AM+AL GY+ + ++ L I FA
Sbjct: 263 ----VAFVEYEDDHVASIAMNALQGYQIKESNGETTVLSISFA 301
>gi|255564206|ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223537662|gb|EEF39285.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 254
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP D T + LF+ + G++E+R++ +P + FVE+ D +
Sbjct: 180 NNILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMVESKPG--------IAFVEYADEMQST 231
Query: 142 TAMDALHGYKFDD 154
AM L G K
Sbjct: 232 VAMQGLQGLKIQQ 244
>gi|313219885|emb|CBY30800.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 22/121 (18%)
Query: 50 IAPGINPTIPDVINGVPSSLRNNAGSPLKK-GESNLLFVDGLPTDCTRREVSHLFRPFVG 108
+APG +P + VP+ N G P K G +N++FV LP + + ++ LF F
Sbjct: 214 VAPGAAVPLP---SAVPAP---NMGLPEGKFGSNNIIFVQDLPEEVDEKMLTALFNQFDN 267
Query: 109 YREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQF 166
+ E+R+ P +TG A F+E+ + + A A D L G+K +PT LKI F
Sbjct: 268 FMEVRM---APSKTGRAA----FIEYTNERSAANAKDTLQGFKV------TPTTQLKITF 314
Query: 167 A 167
A
Sbjct: 315 A 315
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 76 PLKKGES-NLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFV 132
P K +S LFV GLP D RE+ LFR + GY ++V K+P + FV
Sbjct: 8 PAKMADSVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTTKQP---------VGFV 58
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSP-TLKIQFA 167
F+ A A AL G +FD PD P TL+++FA
Sbjct: 59 TFESRAGAEAAKQALQGVRFD---PDMPQTLRLEFA 91
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 21/116 (18%)
Query: 52 PGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
P N T P V G+P+ + A P + G + F G+P + PF G+
Sbjct: 100 PKQNSTTPQV--GIPAIGPHFAREPYELGGA---FFTGVPE-------AWAHHPFPGFSR 147
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+R+ +K +CF+EF D CA AM+AL GY D L+I++A
Sbjct: 148 LRLNNKG-------GSPVCFIEFTDIPCATQAMNALQGYVL--LSSDRGGLRIEYA 194
>gi|449513275|ref|XP_004175808.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Taeniopygia guttata]
Length = 99
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 26 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRQD-----IAFVEFENENQAGAA 77
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K P S +KI +A
Sbjct: 78 RDALQGFKI----PPSHAMKITYA 97
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 68 SLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
+L N G + + +FV GLP D RE+ LFR F GY+ + K + G
Sbjct: 67 TLATNGGVDDTEHQVRTIFVSGLPLDAKPRELYLLFRGFKGYQSSTL--KPAGKNGKPTA 124
Query: 128 VLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FV FD + A AM L G KFD + + ++++FA
Sbjct: 125 PVGFVTFDSREQAEDAMRKLQGVKFDPE--GNQLMRLEFA 162
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 31 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 84
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A M AL+G FD +K TL I A
Sbjct: 85 SAVAVMHALNGMVFDLEKHS--TLHIDLA 111
>gi|313232389|emb|CBY24056.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 22/121 (18%)
Query: 50 IAPGINPTIPDVINGVPSSLRNNAGSPLKK-GESNLLFVDGLPTDCTRREVSHLFRPFVG 108
+APG +P + VP+ N G P K G +N++FV LP + + ++ LF F
Sbjct: 214 VAPGAAVPLP---SAVPAP---NMGLPEGKFGSNNIIFVQDLPEEVDEKMLTALFNQFDN 267
Query: 109 YREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQF 166
+ E+R+ P +TG A F+E+ + + A A D L G+K +PT LKI F
Sbjct: 268 FMEVRM---APSKTGRAA----FIEYTNERSAANAKDTLQGFKV------TPTTQLKITF 314
Query: 167 A 167
A
Sbjct: 315 A 315
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV LP D T RE+S LFR G+ IR+I+KE + + +CF +F D + + A+
Sbjct: 274 LFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGK------LPMCFCDFIDTQSSMFAL 327
Query: 145 DALHGYKFD 153
+ L G++ D
Sbjct: 328 EFLQGFRMD 336
>gi|303281170|ref|XP_003059877.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458532|gb|EEH55829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 224
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV GLP T +S LF+ F G++E+R++ +P + FVEF A
Sbjct: 149 NEILFVQGLPEATTAAMLSMLFQQFPGFKEVRMVEAKPG--------IAFVEFTAETQAS 200
Query: 142 TAMDALHGYKFD 153
A+ L G+K +
Sbjct: 201 VALQGLQGFKIN 212
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR F GY + K + G + FV F+ + A AM
Sbjct: 93 LFVSGLPLDAKPRELYLLFRSFKGYLSSTL--KPAGKNGKLTAPVGFVTFESREQAEEAM 150
Query: 145 DALHGYKFDDKKPD-SPTLKIQFA 167
L G KFD PD + ++++FA
Sbjct: 151 SKLQGVKFD---PDGNQHMRLEFA 171
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF + G++EIR+I +P + FVE++D +
Sbjct: 125 NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--------IAFVEYEDDVQSS 176
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 177 MAMQALQGFKITPQNP 192
>gi|297843490|ref|XP_002889626.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
gi|297335468|gb|EFH65885.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF + G++EIR+I +P + FVE++D +
Sbjct: 159 NNILFIHNLPIEMTSMMLQLLFEQYTGFKEIRMIEAKPG--------IAFVEYEDDVQSS 210
Query: 142 TAMDALHGYK 151
AM AL G++
Sbjct: 211 MAMQALQGFQ 220
>gi|449679798|ref|XP_002163097.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Hydra
magnipapillata]
Length = 219
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
+P S+ + + + + +LF+ LP + T ++ LF+ F GY+E+R++ P R
Sbjct: 127 IPQSMPGHMQMQMPEIPNQILFLSELPDETTEIMLAMLFQQFDGYKEVRLV---PGRHD- 182
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF++ + AR A D L+G+K +PT +KI FA
Sbjct: 183 ----IAFVEFEEAEKARIAKDTLNGFKI------TPTHAMKITFA 217
>gi|339238293|ref|XP_003380701.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 60 DVINGVPSSLRNNAGSPLKKG-ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIR-VIHK 117
DV G S + N+G G E N LFV +PT T EV LFR + R +R V+HK
Sbjct: 767 DVETGQQSD-KPNSGFQYSVGLEKNKLFVKNIPTFATENEVETLFRQYGDLRSVRLVLHK 825
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFP 170
R G L +VEFD+ + A A +G F K+ L ++F++ P
Sbjct: 826 SGRSKG-----LAYVEFDNEEAAERARLGQNGAHFLGKR-----LSVEFSNPP 868
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF + G++EIR+I +P + FVE++D +
Sbjct: 172 NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--------IAFVEYEDDVQSS 223
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 224 MAMQALQGFKITPQNP 239
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF + G++EIR+I +P + FVE++D +
Sbjct: 153 NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--------IAFVEYEDDVQSS 204
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 205 MAMQALQGFKITPQNP 220
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF + G++EIR+I +P + FVE++D +
Sbjct: 153 NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--------IAFVEYEDDVQSS 204
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 205 MAMQALQGFKITPRNP 220
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF + G++EIR+I +P + FVE++D +
Sbjct: 154 NNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAKPG--------IAFVEYEDDVQSS 205
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 206 MAMQALQGFKITPQNP 221
>gi|297824861|ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
gi|297326152|gb|EFH56572.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R++ +P + FVEF D +
Sbjct: 175 NNILFVQNLPHETTPMVLQMLFYQYQGFKEVRMVEAKPG--------IAFVEFADEMQST 226
Query: 142 TAMDALHGYKFDDKK 156
AM L G+K +
Sbjct: 227 VAMQGLQGFKIQQNQ 241
>gi|294461275|gb|ADE76200.1| unknown [Picea sitchensis]
gi|294464400|gb|ADE77712.1| unknown [Picea sitchensis]
Length = 241
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R+I +P + FVE+ D +
Sbjct: 166 NNILFVQNLPHETTSMMLQMLFCQYHGFKEVRMIEAKPG--------IAFVEYADEMQST 217
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 218 VAMQALQGFKITPQNP 233
>gi|217072842|gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 170 NNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPG--------IAFVEYGDEMQST 221
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 222 MAMQALQGFKIAPQNP 237
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ +LFR F GY + R+ D A F F D + A
Sbjct: 33 EVRTLFVAGLPEDVKPREIXNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQSA 86
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA 167
M AL+G FD +K TL I A
Sbjct: 87 VAVMHALNGMVFDLEKHS--TLHIDLA 111
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F +
Sbjct: 34 GAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL-----KYTGRGDQVVAFATFTSHRF 88
Query: 140 ARTAMDALHGYKFD 153
A AM+ L+G KFD
Sbjct: 89 ALAAMNELNGVKFD 102
>gi|255647418|gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP D T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 166 NNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG--------IAFVEYGDEMQST 217
Query: 142 TAMDALHGYKFDDKKPDSPTL 162
AM L G+K P +P L
Sbjct: 218 VAMQTLQGFKIT---PQNPML 235
>gi|356573171|ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP D T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 166 NNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG--------IAFVEYGDEMQST 217
Query: 142 TAMDALHGYKFDDKKP 157
AM L G+K + P
Sbjct: 218 VAMQTLQGFKITPQNP 233
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
Length = 233
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 16/89 (17%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF++ LP C + + LF+ + G++E+R++ P + G L FVEF D A
Sbjct: 158 NKILFLEELPESCNKEMLGVLFKQYQGFKEVRMV---PGKKG-----LAFVEFGDEAQAA 209
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFAH 168
A+ L G+K +PT LK+ FA
Sbjct: 210 IALQGLFGFKL------TPTEALKVSFAK 232
>gi|410909846|ref|XP_003968401.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Takifugu rubripes]
Length = 273
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 198 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 249
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 250 AARDALQGFKIT----QSNAMKISFA 271
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LF+ GLP D REV +LFR F GY + RTG + F F D +
Sbjct: 54 RDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHL------RTGKSSQAYAFAVFADQQ 107
Query: 139 CARTAMDALHGYKFDDKK 156
A A+ A +G FD +K
Sbjct: 108 SALAALSATNGMVFDLEK 125
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 31 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 84
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A M AL+G FD +K TL I A
Sbjct: 85 SAVAVMHALNGMVFDLEKHS--TLHIDLA 111
>gi|119479645|ref|XP_001259851.1| RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408005|gb|EAW17954.1| RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 616
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 407 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 459
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
A++ L+GYK + + +++ F+ P
Sbjct: 460 ALNELYGYKLSNS--NKTGIRLSFSKNPL 486
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 67 SSLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDR 125
S + NAGS KK N + V LP + TR++V LF F + +RV P++
Sbjct: 721 SHRQGNAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKS 776
Query: 126 AMVLCFVEFDDPKCARTAMDALHG 149
A FVEF PK A AMD L G
Sbjct: 777 ARGFAFVEFVLPKEAENAMDQLQG 800
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF+ F GY+E+R++ P R + FVEF + + +
Sbjct: 160 NNILFLTNLPEETNELMLEVLFKQFNGYKEVRLV---PGRHD-----IAFVEFANEQQSG 211
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
TA DAL G+K + TLKI +A
Sbjct: 212 TAKDALQGFKIT----PTNTLKIAYA 233
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 46 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 99
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A M AL+G FD +K TL I A
Sbjct: 100 SAVAVMHALNGMVFDLEKHS--TLHIDLA 126
>gi|388497184|gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 157 NNILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPG--------IAFVEYGDEMQST 208
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 209 MAMQALQGFKIAPQNP 224
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 46 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 99
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A M AL+G FD +K TL I A
Sbjct: 100 SAVAVMHALNGMVFDLEKHS--TLHIDLA 126
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 46 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 99
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A M AL+G FD +K TL I A
Sbjct: 100 SAVAVMHALNGMVFDLEKHS--TLHIDLA 126
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LF+ GLP D REV +LFR F GY + RTG + F F D +
Sbjct: 58 RDELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHL------RTGKSSQAYAFAVFADQQ 111
Query: 139 CARTAMDALHGYKFDDKK 156
A TA+ +G FD +K
Sbjct: 112 SALTALSGTNGMVFDLEK 129
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LFV GLP D RE+ +LFR F GY + R+ D A F F D +
Sbjct: 31 RDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHL------RSSDGAKPFAFAVFSDLQ 84
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A M AL+G FD +K TL I A
Sbjct: 85 SAVAVMHALNGMVFDLEKHS--TLHIDLA 111
>gi|326507414|dbj|BAK03100.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528465|dbj|BAJ93414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 42/146 (28%)
Query: 9 VDTAGVGVHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSS 68
V+ AGVG+H PG G + S LP G +P++I VP
Sbjct: 136 VNQAGVGMHAYPGAYGAPPL-------SQLP----------FGAGPKVMMPEII--VP-- 174
Query: 69 LRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV 128
+N+LFV LP D T + F + G++E+R+I +P
Sbjct: 175 -------------NNILFVQELPHDATALMLQMFFCQYPGFKEVRMIEAKPG-------- 213
Query: 129 LCFVEFDDPKCARTAMDALHGYKFDD 154
+ FVE+ D A AM+ L G+K +
Sbjct: 214 IAFVEYGDEGQATAAMNLLQGFKIKE 239
>gi|302832471|ref|XP_002947800.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
gi|300267148|gb|EFJ51333.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
Length = 224
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP + + LF+ F G+RE+R++ P + FVEF++ +
Sbjct: 149 NKILFVQNLPENSNEAMLGMLFQQFPGFREVRMVEARPG--------IAFVEFENDMQST 200
Query: 142 TAMDALHGYK 151
TAM L G+K
Sbjct: 201 TAMQGLQGFK 210
>gi|149597291|ref|XP_001509496.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Ornithorhynchus anatinus]
Length = 139
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 55 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 106
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 107 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 137
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFR + GY ++V K+ + T + FV F+ A
Sbjct: 4 LFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKQGKNTSP----VGFVTFETRVGAEA 59
Query: 143 AMDALHGYKFDDKKPDSP-TLKIQFA 167
A AL G +FD PD P TL+++FA
Sbjct: 60 AKQALQGVRFD---PDIPQTLRLEFA 82
>gi|449513226|ref|XP_002193869.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 322
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 249 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENENQAGAA 300
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K P S +KI +A
Sbjct: 301 RDALQGFKI----PLSHAMKITYA 320
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ GLP D RE+ +LFR G+ ++ + TG V+ F F + + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 143 AMDALHGYKFD 153
A+ AL+G KFD
Sbjct: 81 ALHALNGVKFD 91
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K ++ G + FV F+ A A
Sbjct: 68 LFVSGLPIDAKPRELYLLFRAYKGYES--SLLKVTQKNGKATTPIGFVTFNSRAAAEEAK 125
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
+L G KFD + P ++++FA
Sbjct: 126 QSLQGVKFDPELPQP--IRLEFA 146
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 66 PSSLRNNAGSPLKKGE-SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
P+SL + S + G+ S LFV L +E+ +F G+ +R++HK
Sbjct: 247 PASLPPTSVSSMSAGQPSTTLFVANLGAKTQEQELLEVFSNIPGFIRLRILHKN------ 300
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FVE+ D A A++AL G+ D ++I+FA
Sbjct: 301 -GFPVAFVEYSDVINANHALNALQGFVLMSS--DRGGMRIEFA 340
>gi|212534592|ref|XP_002147452.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210069851|gb|EEA23941.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 591
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 385 NTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 437
Query: 143 AMDALHGYKFDDK 155
A++ L+GYK +
Sbjct: 438 ALNELYGYKLSNS 450
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ GLP D RE+ +LFR G+ ++ + TG V+ F F + + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 143 AMDALHGYKFD 153
A+ AL+G KFD
Sbjct: 81 ALHALNGVKFD 91
>gi|70998148|ref|XP_753803.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851439|gb|EAL91765.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|159126462|gb|EDP51578.1| RNA binding protein [Aspergillus fumigatus A1163]
Length = 616
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 407 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 459
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
A++ L+GYK + +++ F+ P
Sbjct: 460 ALNELYGYKLSNSTKTG--IRLSFSKNPL 486
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
+NN+ S + V LP + TR++V LF F + +RV P++ A
Sbjct: 749 QNNSTKTKSNKRSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGF 804
Query: 130 CFVEFDDPKCARTAMDALHG 149
FVEF PK A AMD LHG
Sbjct: 805 AFVEFLLPKEAENAMDQLHG 824
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LF+ GLP D REV +LFR F GY + RTG + F F D +
Sbjct: 54 RDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHL------RTGKSSQAYAFAVFADQQ 107
Query: 139 CARTAMDALHGYKFDDKK 156
A A+ A +G FD +K
Sbjct: 108 SALAALSATNGMVFDLEK 125
>gi|242790607|ref|XP_002481586.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218718174|gb|EED17594.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 546
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 340 NTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 392
Query: 143 AMDALHGYKFDDK 155
A++ L+GYK +
Sbjct: 393 ALNELYGYKLSNS 405
>gi|410909848|ref|XP_003968402.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Takifugu rubripes]
Length = 279
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 204 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 255
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 256 AARDALQGFKIT----QSNAMKISFA 277
>gi|194375486|dbj|BAG56688.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 119 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 170
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 171 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 201
>gi|328854301|gb|EGG03434.1| hypothetical protein MELLADRAFT_109264 [Melampsora larici-populina
98AG31]
Length = 364
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP + + + LF+ + E+R I P R + FVE+ D +
Sbjct: 289 NKILFVQNLPENAGKDALEVLFKQYANLVEVRTI---PGRA-----TIAFVEYTDATSSG 340
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YKFD + +K+ FA
Sbjct: 341 VAKDALHNYKFDGEHK----IKVTFA 362
>gi|255949550|ref|XP_002565542.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592559|emb|CAP98914.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 391 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 443
Query: 143 AMDALHGYKFDDK 155
A++ L+GYK +
Sbjct: 444 ALNELYGYKLSNS 456
>gi|15226631|ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana]
gi|2529669|gb|AAC62852.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|16649011|gb|AAL24357.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|330255767|gb|AEC10861.1| spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R+I +P + FVEF D +
Sbjct: 176 NNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAKPG--------IAFVEFADEMQST 227
Query: 142 TAMDALHGYKFDDKK 156
AM L G+K +
Sbjct: 228 VAMQGLQGFKIQQNQ 242
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K + G + FV F+ A A
Sbjct: 15 LFVSGLPMDAKPRELYLLFRAYQGYEG--SLLKVTSKPGKNQSPVGFVTFESRAGAEAAK 72
Query: 145 DALHGYKFDDKKPDSPTLKIQFAH 168
AL G +FD + P T++++FA
Sbjct: 73 QALQGVRFDPELPQ--TIRLEFAK 94
>gi|121713206|ref|XP_001274214.1| RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119402367|gb|EAW12788.1| RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 616
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 407 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 459
Query: 143 AMDALHGYKFDDK 155
A++ L+GYK +
Sbjct: 460 ALNELYGYKLSNS 472
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDD 136
+ + E LF+ GLP D RE+ +LFR F GY ++ + +G ++ F F D
Sbjct: 10 MAEEEVKTLFLSGLPDDIKEREIYNLFRNFEGYESCQL-----KFSGRGFQIVAFAVFTD 64
Query: 137 PKCARTAMDALHGYKFD 153
A A + L+G KFD
Sbjct: 65 QATALKAKEELNGLKFD 81
>gi|327276255|ref|XP_003222885.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Anolis
carolinensis]
Length = 280
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 205 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 256
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 257 AARDALQGFKITQNN----AMKISFA 278
>gi|449512588|ref|XP_004176179.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 221
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 148 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENENQAGAA 199
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K P S +KI +A
Sbjct: 200 RDALQGFKI----PPSHAMKITYA 219
>gi|409052167|gb|EKM61643.1| hypothetical protein PHACADRAFT_248371 [Phanerochaete carnosa
HHB-10118-sp]
Length = 267
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 60 DVINGVPSSLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE 118
D + VP S R N P + N +LF+ LP + T+ ++ LF + E+R+I
Sbjct: 169 DGASAVPVSRRPNVMMPDEYLPPNKILFLQNLPENVTKDQLMALFSQYPNLYEVRLI--- 225
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
P + + FVE+ D A A DALH YK D + +KI FA
Sbjct: 226 PTKKD-----IAFVEYLDEASATVAKDALHNYKLDGEN----KIKITFA 265
>gi|425774296|gb|EKV12605.1| RNA binding protein [Penicillium digitatum Pd1]
gi|425776297|gb|EKV14519.1| RNA binding protein [Penicillium digitatum PHI26]
Length = 518
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFD+ A
Sbjct: 308 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDEVAMASK 360
Query: 143 AMDALHGYKFDDK 155
A++ L+GYK +
Sbjct: 361 ALNELYGYKLSNS 373
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 27 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFHTRAGA 84
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 85 EAAKQDLQGVRFD---PDMPQTIRLEFA 109
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 27 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTSKNGKTASPVGFVTFHTRAGA 84
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 85 EAAKQDLQGVRFD---PDMPQTIRLEFA 109
>gi|147902061|ref|NP_001088194.1| small nuclear ribonucleoprotein polypeptide B [Xenopus laevis]
gi|54035240|gb|AAH84107.1| LOC495019 protein [Xenopus laevis]
Length = 223
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEFD+ A +A
Sbjct: 150 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNETEAGSA 201
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI FA
Sbjct: 202 RDALQGFKIT----PSNAMKITFA 221
>gi|114052106|ref|NP_056597.3| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|114052541|ref|NP_001040102.1| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|41017904|sp|Q62189.3|SNRPA_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|349004|gb|AAC37611.1| small nuclear RNA [Mus musculus]
gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|62740156|gb|AAH94006.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|66794539|gb|AAH96648.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|148692250|gb|EDL24197.1| mCG22754, isoform CRA_a [Mus musculus]
gi|148692251|gb|EDL24198.1| mCG22754, isoform CRA_a [Mus musculus]
Length = 287
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 203 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 254
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 255 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 285
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 57 TIPDVIN------GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
T+P ++N G +S A P ES LFV L T +S LFRP G+
Sbjct: 577 TMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFI 636
Query: 111 EIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
+V +P++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 637 SAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLD 681
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 57 TIPDVIN------GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
T+P ++N G +S A P ES LFV L T +S LFRP G+
Sbjct: 540 TMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFI 599
Query: 111 EIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
+V +P++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 600 SAQVKTRPDPKKPGERLSMGFGFVEFKGRAQAEAALKALNGYKLD 644
>gi|441653781|ref|XP_003270568.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Nomascus
leucogenys]
Length = 211
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 136 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 187
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 188 AARDALQGFKITQNN----AMKISFA 209
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 71 NNAGSPLK-KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
++A PL + E LF+ GLP D REV +LFR F GY + R +G +
Sbjct: 56 DHAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAY 110
Query: 130 CFVEFDDPKCARTAMDALHGYKFD 153
F F D A AM A +G FD
Sbjct: 111 AFAVFADQPSALAAMSATNGRIFD 134
>gi|85114567|ref|XP_964717.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
gi|28926509|gb|EAA35481.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
Length = 530
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R H P +CFVEF+D A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGP---------MCFVEFEDVSFA 397
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
A++ L+G+ + + +++ F+ P
Sbjct: 398 TKALNELYGHTLSNSRKGG--MRLSFSKNPL 426
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F + + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 143 AMDALHGYKFD 153
A+ AL+G KFD
Sbjct: 76 ALHALNGVKFD 86
>gi|395859647|ref|XP_003802145.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Otolemur
garnettii]
Length = 282
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|351715411|gb|EHB18330.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 282
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LF+ GLP D REV +LFR F GY + RTG + F F D +
Sbjct: 54 RDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHL------RTGKSSQAYAFAVFADQQ 107
Query: 139 CARTAMDALHGYKFDDKK 156
A A+ A +G FD +K
Sbjct: 108 SALAALSATNGMVFDLEK 125
>gi|73948310|ref|XP_533663.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Canis lupus
familiaris]
gi|149722301|ref|XP_001499386.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Equus
caballus]
gi|301776649|ref|XP_002923740.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Ailuropoda
melanoleuca]
gi|403305332|ref|XP_003943221.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Saimiri
boliviensis boliviensis]
gi|281340732|gb|EFB16316.1| hypothetical protein PANDA_012942 [Ailuropoda melanoleuca]
Length = 282
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 198 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 249
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 250 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 280
>gi|56605690|ref|NP_001008304.1| U1 small nuclear ribonucleoprotein A [Rattus norvegicus]
gi|55562825|gb|AAH86331.1| Small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
gi|149056537|gb|EDM07968.1| small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
Length = 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 197 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 248
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 249 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 279
>gi|336465288|gb|EGO53528.1| hypothetical protein NEUTE1DRAFT_92899 [Neurospora tetrasperma FGSC
2508]
gi|350295585|gb|EGZ76562.1| hypothetical protein NEUTE2DRAFT_98501 [Neurospora tetrasperma FGSC
2509]
Length = 530
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R H P +CFVEF+D A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGP---------MCFVEFEDVSFA 397
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
A++ L+G+ + + +++ F+ P
Sbjct: 398 TKALNELYGHTLSNSRKGG--MRLSFSKNPL 426
>gi|348552486|ref|XP_003462058.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cavia
porcellus]
Length = 282
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 68 SLRNNAGSPLK-KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA 126
+ ++A PL + E LF+ GLP D REV +LFR F GY + R +G +
Sbjct: 53 AYYDHAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSS 107
Query: 127 MVLCFVEFDDPKCARTAMDALHGYKFD 153
F F D A AM A +G FD
Sbjct: 108 QAYAFAVFADQPSALAAMSATNGRIFD 134
>gi|443720886|gb|ELU10438.1| hypothetical protein CAPTEDRAFT_179768 [Capitella teleta]
Length = 218
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 16/87 (18%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
++LF+ LP + T +S LF F G+RE+R++ P R + FVEF++ A
Sbjct: 144 HILFLTNLPEETTEMMLSMLFNQFPGFREVRLV---PGRHD-----IAFVEFENEVQAGA 195
Query: 143 AMDALHGYKFDDKKPDSPT--LKIQFA 167
A DAL G+K +PT +KI FA
Sbjct: 196 AKDALQGFKI------TPTNAMKISFA 216
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ +LFR F GY + R + + F F K A
Sbjct: 77 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSNSSQPFAFAVFASQKSA 131
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA 167
AM AL+G FD +K TL I A
Sbjct: 132 ILAMHALNGLVFDLEK--GSTLYIDLA 156
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 53 GINPTIPDVIN------GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPF 106
G T+P ++N G +S A P ES LFV L T +S LFRP
Sbjct: 546 GPTVTMPSLLNEKVVSQGFSTSDTFRADEPEAPMESATLFVRNLNFITTDTGLSDLFRPL 605
Query: 107 VGYREIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
G+ +V +P++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 606 DGFISAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLD 654
>gi|114051315|ref|NP_001039504.1| U1 small nuclear ribonucleoprotein A [Bos taurus]
gi|187607541|ref|NP_001119825.1| U1 small nuclear ribonucleoprotein A [Ovis aries]
gi|122142801|sp|Q2KIR1.1|SNRPA_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|86437996|gb|AAI12545.1| Small nuclear ribonucleoprotein polypeptide A [Bos taurus]
gi|184191137|gb|ACC76781.1| SNPRA [Ovis aries]
gi|296477802|tpg|DAA19917.1| TPA: U1 small nuclear ribonucleoprotein A [Bos taurus]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|410983004|ref|XP_003997834.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Felis catus]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 198 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 249
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 250 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 280
>gi|440910289|gb|ELR60098.1| U1 small nuclear ribonucleoprotein A, partial [Bos grunniens mutus]
Length = 287
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 212 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 263
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 264 AARDALQGFKITQNN----AMKISFA 285
>gi|354486243|ref|XP_003505291.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cricetulus griseus]
Length = 284
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 200 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 251
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 252 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 282
>gi|116175267|ref|NP_001070690.1| U1 small nuclear ribonucleoprotein A [Sus scrofa]
gi|122131847|sp|Q06AA4.1|SNRPA_PIG RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|115371743|gb|ABI96196.1| SNRPA [Sus scrofa]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|383873129|ref|NP_001244434.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|114677331|ref|XP_512674.2| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Pan
troglodytes]
gi|297704832|ref|XP_002829283.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pongo abelii]
gi|397482634|ref|XP_003812525.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pan paniscus]
gi|402905610|ref|XP_003915609.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Papio anubis]
gi|355703564|gb|EHH30055.1| hypothetical protein EGK_10636 [Macaca mulatta]
gi|355755853|gb|EHH59600.1| hypothetical protein EGM_09749 [Macaca fascicularis]
gi|380784673|gb|AFE64212.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|383414025|gb|AFH30226.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|384943590|gb|AFI35400.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|410207170|gb|JAA00804.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
gi|410287236|gb|JAA22218.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|444732044|gb|ELW72368.1| U1 small nuclear ribonucleoprotein A [Tupaia chinensis]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|426388777|ref|XP_004060809.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Gorilla
gorilla gorilla]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|355721034|gb|AES07131.1| small nuclear ribonucleoprotein polypeptide A [Mustela putorius
furo]
Length = 281
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 198 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 249
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 250 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 280
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 71 NNAGSPLK-KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
++A PL + E LF+ GLP D REV +LFR F GY + R +G +
Sbjct: 56 DHAAEPLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAY 110
Query: 130 CFVEFDDPKCARTAMDALHGYKFD 153
F F D A AM A +G FD
Sbjct: 111 AFAVFADQPSALAAMSATNGRIFD 134
>gi|189053747|dbj|BAG35999.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|12851426|dbj|BAB29037.1| unnamed protein product [Mus musculus]
Length = 287
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 203 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 254
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 255 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 285
>gi|4759156|ref|NP_004587.1| U1 small nuclear ribonucleoprotein A [Homo sapiens]
gi|134092|sp|P09012.3|SNRPA_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|315583598|pdb|3PGW|A Chain A, Crystal Structure Of Human U1 Snrnp
gi|315583607|pdb|3PGW|P Chain P, Crystal Structure Of Human U1 Snrnp
gi|37541|emb|CAA29653.1| unnamed protein product [Homo sapiens]
gi|340052|gb|AAA61245.1| U1 snRNP-specific protein A [Homo sapiens]
gi|12653273|gb|AAH00405.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|14249835|gb|AAH08290.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|119577399|gb|EAW56995.1| small nuclear ribonucleoprotein polypeptide A, isoform CRA_a [Homo
sapiens]
gi|208967436|dbj|BAG73732.1| small nuclear ribonucleoprotein polypeptide A [synthetic construct]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K ++ G + FV F+ A A
Sbjct: 4 LFVSGLPIDAKPRELYLLFRAYKGYES--SLLKVTQKNGKATTPIGFVTFNSRAAAEEAK 61
Query: 145 DALHGYKFDDKKPDSPTLKIQFAH 168
+L G KFD + P ++++FA
Sbjct: 62 QSLQGVKFDPELPQP--IRLEFAR 83
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F + + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 143 AMDALHGYKFD 153
A+ AL+G KFD
Sbjct: 76 ALHALNGVKFD 86
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 57 TIPDVIN------GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
T+P ++N G +S A P ES LFV L T +S LFRP G+
Sbjct: 710 TMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFI 769
Query: 111 EIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
+V +P++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 770 SAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLD 814
>gi|295314954|gb|ADF97627.1| small nuclear ribonucleoprotein polypeptide A [Hypophthalmichthys
molitrix]
Length = 281
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 257
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL G+K S +KI FA
Sbjct: 258 AAREALQGFKIT----QSNAMKISFA 279
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 57 TIPDVIN------GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
T+P ++N G +S A P ES LFV L T +S LFRP G+
Sbjct: 568 TMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFI 627
Query: 111 EIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
+V +P++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 628 SAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLD 672
>gi|431920192|gb|ELK18231.1| U1 small nuclear ribonucleoprotein A [Pteropus alecto]
Length = 282
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ E LF+ GLP D REV +LFR F GY V R+G A F F D
Sbjct: 64 RDELRTLFIAGLPADVKPREVYNLFRDFPGYVSSHV------RSGKSAQSYAFAVFGDQP 117
Query: 139 CARTAMDALHGYKFDDKK 156
A A+ A +G FD +K
Sbjct: 118 SALAAVSATNGLVFDLEK 135
>gi|41054443|ref|NP_955965.1| U1 small nuclear ribonucleoprotein A [Danio rerio]
gi|39850066|gb|AAH64308.1| Small nuclear ribonucleoprotein polypeptide A [Danio rerio]
Length = 281
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 257
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL G+K S +KI FA
Sbjct: 258 AAREALQGFKIT----QSNAMKISFA 279
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 57 TIPDVIN------GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
T+P ++N G +S A P ES LFV L T +S LFRP G+
Sbjct: 540 TMPSLLNQKVVSQGFSTSDTFKADEPEAPMESATLFVRNLNFVTTDAGLSDLFRPLDGFI 599
Query: 111 EIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
+V +P++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 600 SAQVKTRPDPKKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLD 644
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ N LF+ GLP D RE+ +LFR G+ ++ + TG V+ F F + +
Sbjct: 22 RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQ 76
Query: 139 CARTAMDALHGYKFD 153
A TA+ AL+G KFD
Sbjct: 77 SAVTALHALNGVKFD 91
>gi|432109445|gb|ELK33675.1| U1 small nuclear ribonucleoprotein A [Myotis davidii]
Length = 282
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 259 AARDALQGFKITQNN----AMKISFA 280
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K + G A + FV F+ A A
Sbjct: 23 LFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFNTRAGAEAAK 80
Query: 145 DALHGYKFDDKKPDSP-TLKIQFA 167
L G +FD PD P T++++FA
Sbjct: 81 QDLQGVRFD---PDLPQTIRLEFA 101
>gi|219121341|ref|XP_002185896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582745|gb|ACI65366.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 226
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S L LP+DC + LFR + GY+E+R+ PR L F+EF+D A
Sbjct: 153 SKYLLAQNLPSDCNEMMLGMLFRQYSGYKEVRM----PRPG------LAFIEFEDEPHAT 202
Query: 142 TAMDALHGYKF 152
A +AL+G+K
Sbjct: 203 LARNALNGFKL 213
>gi|410075513|ref|XP_003955339.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
gi|372461921|emb|CCF56204.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
Length = 571
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 51 APGINPTIPDVINGVPSSLRNNAGS--------------PLKKGESN----LLFVDGLPT 92
+ G + +++N SSL NNAG P + N L+V LP
Sbjct: 392 SAGTTTSTNNIVNKSSSSLANNAGGISQADLSLLARVPPPANPADQNPPCNTLYVGNLPP 451
Query: 93 DCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKF 152
D T +E+ LF G+R + +K G M CFVEFDD A A+ L+G +
Sbjct: 452 DATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGPM--CFVEFDDVSFATRALAELYGSQL 509
>gi|157836397|pdb|2U1A|A Chain A, Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20
Structures
Length = 88
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 13 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 64
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 65 AARDALQGFKITQNN----AMKISFA 86
>gi|417409102|gb|JAA51075.1| Putative spliceosomal protein snrnp-u1a/u2b, partial [Desmodus
rotundus]
Length = 258
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 183 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 234
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 235 AARDALQGFKITQNN----AMKISFA 256
>gi|390479015|ref|XP_003735632.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Callithrix jacchus]
Length = 275
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 200 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 251
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 252 AARDALQGFKITQNN----AMKISFA 273
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F + + A
Sbjct: 22 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 76
Query: 143 AMDALHGYKFD 153
A+ AL+G KFD
Sbjct: 77 ALHALNGVKFD 87
>gi|126329351|ref|XP_001371614.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Monodelphis
domestica]
Length = 340
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 265 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 316
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 317 AARDALQGFKITQNN----AMKISFA 338
>gi|339255862|ref|XP_003370674.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316965776|gb|EFV50450.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 220
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 62 INGVPSSLRNNAGSPLKKGESN-----LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIH 116
I + LR + G+ ESN +LF LP + T + LF F G++E+R++
Sbjct: 124 IAAEKARLRASEGTNYVSVESNPPPNKILFCTNLPEEATEHMLQMLFNQFPGFKEVRLV- 182
Query: 117 KEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYK 151
P R + FVEFD+ ++TA D L +K
Sbjct: 183 --PNRHD-----IAFVEFDNEYQSKTARDTLQNFK 210
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LF+ GLP D RE+ +LFR F GY + R + F F D + A
Sbjct: 76 EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQSA 130
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA 167
AM AL+G FD +K TL I A
Sbjct: 131 IAAMHALNGMVFDLEK--GSTLYIDLA 155
>gi|387018110|gb|AFJ51173.1| U1 small nuclear ribonucleoprotein A [Crotalus adamanteus]
Length = 281
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 257
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 258 AARDALQGFKITQNN----AMKISFA 279
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LF+ GLP D RE+ +LFR F GY + R + F F D + A
Sbjct: 79 EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQSA 133
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA 167
AM AL+G FD +K TL I A
Sbjct: 134 IAAMHALNGMVFDLEK--GSTLYIDLA 158
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ GLP D RE+ +LFR F GY + R + + F F + + A A+
Sbjct: 84 LFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPNNSSQAFAFAVFSNQQSAIMAL 138
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
AL+G FD +K TL I A
Sbjct: 139 HALNGMIFDLEK--GSTLYIDLA 159
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
K + LFV LP D T RE+S LFR G+ R++ +E + +CF +F D
Sbjct: 211 KDPQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGK------YPICFCDFRDIP 264
Query: 139 CARTAMDALHGYKFD 153
A AM+ L GY+ D
Sbjct: 265 SAIMAMEILQGYRMD 279
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ +LFR F GY + + P +T + F F D A AM
Sbjct: 77 LFVAGLPEDVMPREIYNLFREFPGYESSHL--RTPTQT---SQPFAFATFADQPSAVAAM 131
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
AL+G FD +K TL I A
Sbjct: 132 HALNGMVFDLEK--GSTLYIDLA 152
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV L +CT +E++ LF F G+ ++++ + FV+F D C+ A+
Sbjct: 240 LFVANLGPNCTEQELTQLFSRFAGFLKLKM-------QSTYGAPVAFVDFQDTACSTGAL 292
Query: 145 DALHG 149
+ L G
Sbjct: 293 NHLQG 297
>gi|291234607|ref|XP_002737237.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Saccoglossus
kowalevskii]
Length = 249
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + + LF F ++E+R++ P R + FVEF++ A
Sbjct: 174 NNILFLTNLPEETNEMMLQMLFNQFQAFKEVRLV---PGRHD-----IAFVEFENETQAG 225
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 226 VAKDALQGFKIT----PSNAMKISFA 247
>gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|60618430|gb|AAH90598.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|89273875|emb|CAJ82017.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
Length = 282
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A ++L G+K S ++KI FA
Sbjct: 259 AARESLQGFKIT----QSNSMKISFA 280
>gi|395859649|ref|XP_003802146.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Otolemur
garnettii]
Length = 231
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 156 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 207
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K +KI FA
Sbjct: 208 AARDALQGFKITQNN----AMKISFA 229
>gi|402220077|gb|EJU00150.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 276
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP T ++ LF + G E+R++ P + + FVE+ D A
Sbjct: 201 NKILFLQNLPDSTTLDQLQMLFSQYPGLHEVRLV---PTKKD-----IAFVEYVDENAAS 252
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
TA DALH Y+ D + +K+ FA
Sbjct: 253 TAKDALHNYRLDGE----AKMKVTFA 274
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A ++L G+K S ++KI FA
Sbjct: 259 AARESLQGFKIT----QSNSMKISFA 280
>gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 197 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAA 248
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL G+K + +KI FA
Sbjct: 249 AAREALQGFKIT----QTNAMKISFA 270
>gi|325182719|emb|CCA17174.1| U1 small nuclear ribonucleoprotein A putative [Albugo laibachii
Nc14]
Length = 234
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
++LF+ LP C + + LF + GY+E+R++ P ++ L FVEF D A
Sbjct: 161 HILFLQDLPPSCNQDMLRVLFEQYHGYKEVRMV---PGKS------LAFVEFGDESQASV 211
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A+ L+G+K + LKI FA
Sbjct: 212 ALQGLYGFKL----TSTDVLKISFA 232
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A ++L G+K S ++KI FA
Sbjct: 259 AARESLQGFKIT----QSNSMKISFA 280
>gi|401887165|gb|EJT51169.1| RNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 269
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP T+ ++ +F + G EIR I + + FVE+ D +
Sbjct: 194 NNVLFVQNLPEGTTQDDLREVFEQYPGLVEIRTIAAKKD--------IAFVEYADETASA 245
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH +K D + +K+ FA
Sbjct: 246 VAKDALHNFKIDGET----KMKVTFA 267
>gi|453081177|gb|EMF09226.1| small nuclear ribonucleo protein U [Mycosphaerella populorum
SO2202]
Length = 236
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
+L + LP+D T+ V+ +F+ F G +E+R++ P R+G L F E++D A
Sbjct: 162 KILILRDLPSDYTKEAVTAVFQRFPGLKEVRMV---PGRSG-----LAFAEYNDEIEAAV 213
Query: 143 AMDALHGYKFDDKKPDSPTLKIQF 166
A +A+HG DK T+++ F
Sbjct: 214 AREAMHGVTLGDK-----TVRVTF 232
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKG-----ESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
PT + NG PS++ NN SP++ G ++NL+ V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTSNG-PSTMSNNCSSPVESGSIEDSKTNLI-VNYLPQNMTQEELKSLFGSIGEIE 95
Query: 111 EIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 96 SCKLVRD--KITG-QSLGYGFVNYVDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 145
>gi|392597982|gb|EIW87304.1| RNA binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +++ LF + E+R+I P + + FVEF D A
Sbjct: 188 NKILFLQNLPENVDKEQLTTLFTQYPNLHEVRLI---PTKKD-----IAFVEFVDEASAG 239
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YK D + +KI FA
Sbjct: 240 VAKDALHNYKLDGEN----KIKITFA 261
>gi|384251055|gb|EIE24533.1| U1 small nuclear ribonucleo protein A [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV LP + T ++ LF+ + GY E R++ P + FVEF+D A A
Sbjct: 151 ILFVQNLPEETTSAMLALLFQQYAGYIETRMVEARPG--------IAFVEFEDEDKATVA 202
Query: 144 MDALHGYK 151
M L G+K
Sbjct: 203 MAGLQGFK 210
>gi|148706068|gb|EDL38015.1| mCG22457 [Mus musculus]
Length = 275
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ + + FVEFD+ A
Sbjct: 202 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVRHD----------IAFVEFDNEVQAG 251
Query: 142 TAMDALHGYKF 152
A DAL G+K
Sbjct: 252 AARDALQGFKI 262
>gi|323346831|gb|EGA81110.1| Whi3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 629
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHGYKF 152
A+ L+G +
Sbjct: 598 ALAELYGXQL 607
>gi|378734415|gb|EHY60874.1| hypothetical protein HMPREF1120_08818 [Exophiala dermatitidis
NIH/UT8656]
Length = 460
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 50 IAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGY 109
+AP + P I NG P + +P + ++V LP TR+++ ++FR F
Sbjct: 227 MAPSVEPRIRGTFNGSP--VVRGFSTPRSAVDQKSIYVGNLPDGTTRQDLENIFREFGHI 284
Query: 110 REIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
++ VI K GD + FVEF +P+ A A
Sbjct: 285 VQVNVIRKN--FAGDSVNIFAFVEFSNPREAERA 316
>gi|323450983|gb|EGB06862.1| hypothetical protein AURANDRAFT_28680 [Aureococcus anophagefferens]
Length = 214
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN+LF LP DC +S LF+ + G++E+R++ P + G + FVEF D A
Sbjct: 139 SNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRMV---PGKKG-----IAFVEFADETQAS 190
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAH 168
A+ L +K + TL + FA
Sbjct: 191 LALQGLDNFKL----TPTDTLALSFAK 213
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + T +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 146
>gi|353234729|emb|CCA66751.1| related to small nuclear ribonucleoprotein snRNP U1A
[Piriformospora indica DSM 11827]
Length = 274
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D T+ + +F F + E+R+I P + + FVE+ D A
Sbjct: 199 NQILFVQNLPPDITKDALVAMFSRFENFYEVRMI---PTKKD-----IAFVEYADEASAT 250
Query: 142 TAMDALHGYKFD 153
A DALH +K D
Sbjct: 251 VAKDALHNFKLD 262
>gi|344250312|gb|EGW06416.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 291
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 207 AQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFV 258
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A DAL G+K +KI FA
Sbjct: 259 EFDNEVQAGAARDALQGFKITQNN----AMKISFA 289
>gi|347966393|ref|XP_003435906.1| AGAP013145-PA [Anopheles gambiae str. PEST]
gi|333470078|gb|EGK97506.1| AGAP013145-PA [Anopheles gambiae str. PEST]
Length = 411
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F+ A
Sbjct: 246 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFNTRAGA 303
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 304 EAAKQDLQQGVRFD---PDMPQTIRLEFA 329
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 61 VINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV-IHKEP 119
V G +S A P ES LFV L T +S LFRP G+ +V +P
Sbjct: 551 VSQGFSTSDTFKADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDP 610
Query: 120 RRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFD 153
++ G+R +M FVEF A A+ AL+GYK D
Sbjct: 611 KKPGERLSMGFGFVEFKSRAQAEAALKALNGYKLD 645
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + T +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 146
>gi|323335900|gb|EGA77178.1| Whi3p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHGYKF 152
A+ L+G +
Sbjct: 598 ALAELYGXQL 607
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ +LFR F GY + + P +T + F F D A AM
Sbjct: 78 LFVAGLPDDVKPREIYNLFREFPGYESSHL--RSPTQT---SQPFAFATFIDQPSAVAAM 132
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
AL+G FD +K TL I A
Sbjct: 133 HALNGMVFDLEK--GSTLYIDLA 153
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K + G A + FV F A A
Sbjct: 59 LFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFHTRAGAEAAK 116
Query: 145 DALHGYKFDDKKPDSP-TLKIQFA 167
L G +FD PD P T++++FA
Sbjct: 117 QDLQGVRFD---PDMPQTIRLEFA 137
>gi|401623965|gb|EJS42043.1| whi3p [Saccharomyces arboricola H-6]
Length = 664
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 601 ALAELYG 607
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
AMD LHG
Sbjct: 817 ENAMDQLHG 825
>gi|151944344|gb|EDN62622.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 661
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|6324132|ref|NP_014202.1| Whi3p [Saccharomyces cerevisiae S288c]
gi|465481|sp|P34761.1|WHI3_YEAST RecName: Full=Protein WHI3
gi|393077|gb|AAA03320.1| Whi3p [Saccharomyces cerevisiae]
gi|600068|emb|CAA55511.1| N1382 [Saccharomyces cerevisiae]
gi|1302195|emb|CAA96092.1| WHI3 [Saccharomyces cerevisiae]
gi|285814462|tpg|DAA10356.1| TPA: Whi3p [Saccharomyces cerevisiae S288c]
gi|392296797|gb|EIW07898.1| Whi3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|395529330|ref|XP_003766769.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Sarcophilus
harrisii]
Length = 241
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 166 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 217
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K + +KI FA
Sbjct: 218 AARDALQGFKIT----QNNAMKISFA 239
>gi|323352890|gb|EGA85192.1| Whi3p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|347966391|ref|XP_003435905.1| AGAP013145-PB [Anopheles gambiae str. PEST]
gi|333470079|gb|EGK97507.1| AGAP013145-PB [Anopheles gambiae str. PEST]
Length = 515
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F+ A
Sbjct: 246 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFNTRAGA 303
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 304 EAAKQDLQQGVRFD---PDMPQTIRLEFA 329
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
AMD LHG
Sbjct: 817 ENAMDQLHG 825
>gi|259149165|emb|CAY82407.1| Whi3p [Saccharomyces cerevisiae EC1118]
gi|365763510|gb|EHN05038.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHGYKF 152
A+ L+G +
Sbjct: 598 ALAELYGTQL 607
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G++E+R++ +P + FVE+ D +
Sbjct: 179 NNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPG--------IAFVEYGDEMQST 230
Query: 142 TAMDALHGYK 151
AM L G+K
Sbjct: 231 GAMHGLQGFK 240
>gi|323303359|gb|EGA57155.1| Whi3p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|159470585|ref|XP_001693437.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282940|gb|EDP08691.1| predicted protein [Chlamydomonas reinhardtii]
Length = 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 64 GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
G PS + + + +LFV LP + LF+ F G+RE+R++ P
Sbjct: 140 GWPSMQAGVSAAGAANAPNKILFVQNLPETSNEAMLGMLFQQFPGFREVRMVEARPG--- 196
Query: 124 DRAMVLCFVEFDDPKCARTAMDALHGYK 151
+ FVE+++ + TAM L G+K
Sbjct: 197 -----IAFVEYENEMQSGTAMQGLQGFK 219
>gi|126723082|ref|NP_001075629.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
Length = 282
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A D+L G+K +KI FA
Sbjct: 259 AARDSLQGFKITQNN----AMKISFA 280
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 67 SSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA 126
SS +N + K S + V LP + TR++V LF F + +RV P++ A
Sbjct: 740 SSQNSNTKTKSNK-RSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSA 794
Query: 127 MVLCFVEFDDPKCARTAMDALHG 149
FVEF PK A AMD LHG
Sbjct: 795 RGFAFVEFLLPKEAENAMDQLHG 817
>gi|357621621|gb|EHJ73396.1| U1 small nuclear ribonucleoprotein A [Danaus plexippus]
Length = 220
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 23/115 (20%)
Query: 56 PTIPDVINGVPSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV 114
P +P G PS L N NA P + +LF+ LP + + +S LF F G++E+R+
Sbjct: 124 PNVPGF--GQPSVLNNVNAEQP----PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRL 177
Query: 115 IHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ P R + FVEF + + A +AL G+K +PT +KI FA
Sbjct: 178 V---PNRHD-----IAFVEFANEMQSAAAKEALQGFKI------TPTHAMKISFA 218
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV GLP D RE+ ++FR G+ ++ + TG V+ F F + + A
Sbjct: 31 NTLFVSGLPDDVKAREIHNIFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQSAIA 85
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A+ +L+G KFD + TL I+ A
Sbjct: 86 ALHSLNGVKFDPQS--GSTLHIELA 108
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
AMD LHG
Sbjct: 817 ENAMDQLHG 825
>gi|349580746|dbj|GAA25905.1| K7_Whi3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 661
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|432890232|ref|XP_004075429.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Oryzias latipes]
gi|432890234|ref|XP_004075430.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Oryzias latipes]
Length = 272
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 197 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 248
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A D+L G+K + +KI FA
Sbjct: 249 AARDSLQGFKIT----QTHAMKISFA 270
>gi|256270770|gb|EEU05931.1| Whi3p [Saccharomyces cerevisiae JAY291]
Length = 661
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
AMD LHG
Sbjct: 817 ENAMDQLHG 825
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
AMD LHG
Sbjct: 817 ENAMDQLHG 825
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
AMD LHG
Sbjct: 817 ENAMDQLHG 825
>gi|91078752|ref|XP_968271.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A
[Tribolium castaneum]
gi|270003743|gb|EFA00191.1| hypothetical protein TcasGA2_TC003016 [Tribolium castaneum]
Length = 214
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
GS ++ + +LF+ LP + + +S LF F G++E+R++ P R + FVE
Sbjct: 131 GSNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVE 182
Query: 134 FDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
F++ + A DAL G+K +PT +KI FA
Sbjct: 183 FENELQSGAAKDALQGFKI------TPTHAMKISFA 212
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F + + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQAAMQ 75
Query: 143 AMDALHGYKFD 153
A+ +L+G KFD
Sbjct: 76 ALHSLNGVKFD 86
>gi|207341833|gb|EDZ69780.1| YNL197Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 661
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 598 ALAELYG 604
>gi|119630691|gb|EAX10286.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_b
[Homo sapiens]
Length = 242
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFAHF 169
DAL G+K S +KI +A F
Sbjct: 204 RDALQGFKI----TPSHAMKITYAKF 225
>gi|332855731|ref|XP_003316404.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Pan
troglodytes]
Length = 227
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 152 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 203
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K + +KI FA
Sbjct: 204 AARDALQGFKIT----QNNAMKISFA 225
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKG-----ESNLLFVDGLPTDCTRREVSHLFRPFVGYR 110
PT + NG PS++ NN SP++ G ++NL+ V+ LP + T+ E+ LF
Sbjct: 89 PTCNNTSNG-PSTITNNCSSPVESGSVEDSKTNLI-VNYLPQNMTQEELKSLFGSIGEIE 146
Query: 111 EIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 147 SCKLVR--DKITG-QSLGYGFVNYVDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 196
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP T+ E+ +F+ +E+R++ R G + L +VE+DD A
Sbjct: 751 EKNKLFVKGLPVTTTKEELEEIFKVHGTLKEVRIV---TYRNG-HSKGLAYVEYDDENSA 806
Query: 141 RTAMDALHGYKFDDK 155
A+ A G K DK
Sbjct: 807 AKALLATDGMKVSDK 821
>gi|225437410|ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + F + G++E+R++ +P + FVE+ D +
Sbjct: 170 NNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPG--------IAFVEYGDEMQST 221
Query: 142 TAMDALHGYKFDDKKP 157
AM L G K + + P
Sbjct: 222 VAMQGLQGLKINQQNP 237
>gi|392570636|gb|EIW63808.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 281
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + ++ ++ LF + E+R+I P + + FVEF D A
Sbjct: 206 NKILFLQNLPKNVSKDQLMALFAQYPNLHEVRLI---PTKKD-----IAFVEFLDEASAT 257
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YK D + +KI FA
Sbjct: 258 VAKDALHNYKLDGEN----KIKITFA 279
>gi|336365379|gb|EGN93730.1| hypothetical protein SERLA73DRAFT_189480 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377939|gb|EGO19099.1| hypothetical protein SERLADRAFT_480314 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 60 DVINGVPSSLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE 118
D + VP+ R N P + N +LF+ LP + T+ ++ LF + E+R+I
Sbjct: 164 DGVTAVPAPKRPNVQMPDEYLPPNKILFLQNLPENVTKDQLMALFSQYPNLYEVRLI--- 220
Query: 119 PRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
P + + FVE+ D A A DALH YK D + +KI FA
Sbjct: 221 PTKKD-----IAFVEYIDEGSAGVAKDALHNYKLDGEN----KIKITFA 260
>gi|426388779|ref|XP_004060810.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Gorilla
gorilla gorilla]
Length = 229
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 154 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 205
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K + +KI FA
Sbjct: 206 AARDALQGFKIT----QNNAMKISFA 227
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + LF+ + G++E+R++ +P + FVE+ D +
Sbjct: 156 NNILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPG--------IAFVEYGDEMQST 207
Query: 142 TAMDALHGYK 151
AM L G+K
Sbjct: 208 GAMHGLQGFK 217
>gi|357134589|ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Brachypodium
distachyon]
Length = 251
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP D T + LF + G++E R+I +P + FVE+ D A
Sbjct: 176 NNILFVQNLPHDTTPMMLQMLFCQYQGFKEARMIEAKPG--------IAFVEYGDEGQAT 227
Query: 142 TAMDALHGYK 151
AM AL +K
Sbjct: 228 AAMSALQNFK 237
>gi|350632868|gb|EHA21235.1| hypothetical protein ASPNIDRAFT_54716 [Aspergillus niger ATCC 1015]
Length = 611
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFDD A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDDVGTAGK 458
Query: 143 AMDALHGYKFDDK 155
A++ L+G K +
Sbjct: 459 ALNELYGVKLSNS 471
>gi|348534739|ref|XP_003454859.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oreochromis
niloticus]
Length = 282
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEF++ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K + +KI FA
Sbjct: 259 AARDALQGFKIT----QTNAMKISFA 280
>gi|145235395|ref|XP_001390346.1| RNA binding protein [Aspergillus niger CBS 513.88]
gi|134058028|emb|CAK38257.1| unnamed protein product [Aspergillus niger]
Length = 611
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFDD A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDDVGTAGK 458
Query: 143 AMDALHGYKFDDK 155
A++ L+G K +
Sbjct: 459 ALNELYGVKLSNS 471
>gi|406694958|gb|EKC98273.1| hypothetical protein A1Q2_07287 [Trichosporon asahii var. asahii
CBS 8904]
Length = 865
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP T+ ++ +F + G EIR I + + FVE+ D +
Sbjct: 790 NNVLFVQNLPEGTTQDDLREVFEQYPGLVEIRTIAAKKD--------IAFVEYADETASA 841
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH +K D + +K+ FA
Sbjct: 842 VAKDALHNFKIDGET----KMKVTFA 863
>gi|365758778|gb|EHN00605.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 664
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R + +K G +CFVEFDD A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 143 AMDALHGYKF 152
A+ L+G +
Sbjct: 601 ALAELYGRQL 610
>gi|449280001|gb|EMC87413.1| U2 small nuclear ribonucleoprotein B'' [Columba livia]
Length = 226
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 153 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENENQAGAA 204
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 205 RDALQGFKI----TPSHAMKITYA 224
>gi|389742376|gb|EIM83563.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 274
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP T+ ++ LF + E+R+I P + + FVE+ D A
Sbjct: 199 NKILFLQNLPESVTKPQLEALFTQYPNLHEVRLI---PTKKD-----IAFVEYVDEGSAT 250
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YK D + +KI FA
Sbjct: 251 VAKDALHNYKLDGEN----KIKITFA 272
>gi|358374685|dbj|GAA91275.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEFDD A
Sbjct: 404 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFDDVGTAGK 456
Query: 143 AMDALHGYKFDDK 155
A++ L+G K +
Sbjct: 457 ALNELYGVKLSNS 469
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K + G A + FV F A A
Sbjct: 33 LFVSGLPMDAKPRELYLLFRAYSGYES--SLLKITSKNGKTASPVGFVTFSTKAEADEAR 90
Query: 145 DALHGYKFDDKKPD-SPTLKIQFA 167
AL G +FD PD + T++++ A
Sbjct: 91 KALQGVRFD---PDNAQTIRLELA 111
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTTNG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY ++ K + G + FV F A A
Sbjct: 5 LFVSGLPMDAKPRELYLLFRAYDGYENSQL--KVTSKNGKTTSPVGFVTFATRASAEGAK 62
Query: 145 DALHGYKFDDKKPDSP-TLKIQFA 167
L G +FD PD P T++++FA
Sbjct: 63 QDLQGVRFD---PDIPQTIRLEFA 83
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PS++ A +P + LFV L + +E+ LF F GY +R+ +K
Sbjct: 173 TPSAMGGGANAPC-----STLFVANLGQFVSEQELKELFGSFPGYCRLRMHNKG------ 221
Query: 125 RAMVLCFVEFDDPKCARTAMDALHG 149
+ FVE+ D +CA A+ +L G
Sbjct: 222 -GAPVAFVEYADVRCAAQALISLQG 245
>gi|90077244|dbj|BAE88302.1| unnamed protein product [Macaca fascicularis]
Length = 197
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 122 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNEVQAG 173
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K + +KI FA
Sbjct: 174 AARDALQGFKI----TQNNAMKISFA 195
>gi|238495454|ref|XP_002378963.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|317149634|ref|XP_001823556.2| RNA binding protein [Aspergillus oryzae RIB40]
gi|220695613|gb|EED51956.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|391872269|gb|EIT81403.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 614
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 405 NTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQ-------NGPMCFVEFEDVGTAGK 457
Query: 143 AMDALHGYKFDDK 155
+++ L+GYK +
Sbjct: 458 SLNELYGYKLSNS 470
>gi|67901426|ref|XP_680969.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|40742696|gb|EAA61886.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|259484045|tpe|CBF79932.1| TPA: RNA binding protein (AFU_orthologue; AFUA_5G08330)
[Aspergillus nidulans FGSC A4]
Length = 628
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D E+ LF GY+ + +K+ +CFVEF+D + A
Sbjct: 413 NTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQ-------NGPMCFVEFEDVRTAGK 465
Query: 143 AMDALHGYKFDDK 155
++ L+GYK +
Sbjct: 466 TLNELYGYKLSNS 478
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LF+ GLP D RE+ +LFR F GY + R + F F D + A
Sbjct: 76 EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQSA 130
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA 167
M AL+G FD +K TL I A
Sbjct: 131 IATMHALNGMVFDLEK--GSTLYIDLA 155
>gi|401825322|ref|XP_003886756.1| putative RNA-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392997912|gb|AFM97775.1| putative RNA-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 247
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV+ P + +S +F PF + I+++ +EPR + VEF DP+ A+ AM
Sbjct: 5 LFVNNFPESYSEESMSLIFSPFGEIKSIKIL-REPR-------LFSIVEFRDPQNAKAAM 56
Query: 145 DALHGYKF 152
D+L+G K
Sbjct: 57 DSLNGRKL 64
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ LFR + GY + K + G A + FV F A A
Sbjct: 33 LFVSGLPMDAKPRELYLLFRAYSGYES--SLLKITSKNGKTASPVGFVTFSTKAEADEAR 90
Query: 145 DALHGYKFDDKKPD-SPTLKIQFA 167
AL G +FD PD + T++++ A
Sbjct: 91 KALQGVRFD---PDNAQTIRLELA 111
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTTNG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|390338613|ref|XP_003724811.1| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 1
[Strongylocentrotus purpuratus]
Length = 469
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 73 AGSPLKKG-ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
A +P ++G E LF+ LP + E++ +F PF +V R +++ F
Sbjct: 373 AAAPQREGPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVD---RVTNQSKCFGF 429
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQ 165
V FD+P+CA+ A+ A++G++ K+ LK+Q
Sbjct: 430 VSFDNPQCAQAAIQAMNGFQIGMKR-----LKVQ 458
>gi|195456672|ref|XP_002075236.1| GK16926 [Drosophila willistoni]
gi|194171321|gb|EDW86222.1| GK16926 [Drosophila willistoni]
Length = 806
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E+N +FV LP+DCT+ +++ +F+PF +++R++ K ++ + ++E++ P A
Sbjct: 627 ETNKIFVKNLPSDCTKEQLTGIFKPFGTIKDVRLVFKFNKQFKG----IAYIEYELPSEA 682
Query: 141 RTAMDALHGYKFDDKK 156
+ A+ G+ +K
Sbjct: 683 QKAVTQRDGFSIGGQK 698
>gi|258570691|ref|XP_002544149.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904419|gb|EEP78820.1| predicted protein [Uncinocarpus reesii 1704]
Length = 603
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEFDD A
Sbjct: 392 NTLYVGNLPPDTSEDELKALFSKQRGYKRM-IFRQKPNGP------ICFVEFDDISWATK 444
Query: 143 AMDALHGYKFDDK 155
++ L+GY+ +
Sbjct: 445 SLKELYGYELSNS 457
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV GLP D RE+ +LFR G+ ++ + TG V+ F F + + A
Sbjct: 21 NTLFVSGLPDDVKPREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQTAVA 75
Query: 143 AMDALHGYKFD 153
A+ AL+G KFD
Sbjct: 76 ALHALNGVKFD 86
>gi|322797045|gb|EFZ19352.1| hypothetical protein SINV_13322 [Solenopsis invicta]
Length = 152
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 77 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 128
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 129 AAKDALQGFKIT----PSHAMKISFA 150
>gi|449495575|ref|XP_004176204.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 225
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENENQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKI----TPSHAMKITYA 223
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 71 NNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLC 130
++AGS K SN + + LP + TR+++ LF F + +RV P++ A
Sbjct: 701 SSAGSKTSKSGSNKIIIKNLPFEATRKDILELFGAFGQLKSVRV----PKKFDKSARGFA 756
Query: 131 FVEFDDPKCARTAMDALHG 149
FVEF+ K A AM+ L G
Sbjct: 757 FVEFNLLKEAENAMNQLEG 775
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 145
>gi|449512082|ref|XP_002199484.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 221
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 148 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENENQAGAA 199
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 200 RDALQGFKIT----PSHAMKITYA 219
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N LFV GLPT EV L PF E+R + G + FVEF DP
Sbjct: 234 NNKLFVGGLPTTLGSDEVKELLTPF---GELRTFNLVKEGNGSVSKGFAFVEFLDPAVTD 290
Query: 142 TAMDALHGYKFDDK 155
A+ L+G++ D+
Sbjct: 291 IAIQGLNGFQLGDR 304
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 37 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 95
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 96 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 144
>gi|297743906|emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP + T + F + G++E+R++ +P + FVE+ D +
Sbjct: 157 NNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPG--------IAFVEYGDEMQST 208
Query: 142 TAMDALHGYKFDDKKP 157
AM L G K + + P
Sbjct: 209 VAMQGLQGLKINQQNP 224
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 37 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 95
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 96 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 144
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|449469074|ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LFV LP + T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 173 NSILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--------IAFVEYSDEVQST 224
Query: 142 TAMDALHGYKFD 153
AM AL G+K +
Sbjct: 225 VAMQALQGFKMN 236
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 66 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 124
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 125 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 173
>gi|83772293|dbj|BAE62423.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 566
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 357 NTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQ-------NGPMCFVEFEDVGTAGK 409
Query: 143 AMDALHGYKFDDK 155
+++ L+GYK +
Sbjct: 410 SLNELYGYKLSNS 422
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 283 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 341
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 342 CKLVRD---KITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 390
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 145
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LFV LP + T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 167 NSILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--------IAFVEYSDEVQST 218
Query: 142 TAMDALHGYKFD 153
AM AL G+K +
Sbjct: 219 VAMQALQGFKMN 230
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 23 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 81
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 82 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 130
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|321172607|gb|ADW77182.1| couch potato [Culex pipiens]
Length = 252
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 85 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFSTRSGA 142
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 143 EAAKQDLQQGVRFD---PDMPQTIRLEFA 168
>gi|226372064|gb|ACO51657.1| U1 small nuclear ribonucleoprotein A [Rana catesbeiana]
Length = 279
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEF++ A
Sbjct: 204 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEVQAG 255
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A ++L G+K S ++KI FA
Sbjct: 256 AARESLQGFKIT----QSNSMKISFA 277
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 23 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 81
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 82 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 130
>gi|115462171|ref|NP_001054685.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|122169518|sp|Q0DKM4.1|RU1A_ORYSJ RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|384950745|sp|A2Y0J7.1|RU1A_ORYSI RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|113578236|dbj|BAF16599.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|125550898|gb|EAY96607.1| hypothetical protein OsI_18512 [Oryza sativa Indica Group]
gi|222630249|gb|EEE62381.1| hypothetical protein OsJ_17170 [Oryza sativa Japonica Group]
Length = 253
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R++ +P + FVE+ D A
Sbjct: 178 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--------IAFVEYGDEGQAT 229
Query: 142 TAMDALHGYK 151
AM+ L G+K
Sbjct: 230 AAMNHLQGFK 239
>gi|340726396|ref|XP_003401545.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Bombus
terrestris]
gi|350423999|ref|XP_003493658.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Bombus
impatiens]
Length = 233
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 158 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 209
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 210 AAKDALQGFKIT----PSHAMKISFA 231
>gi|213510744|ref|NP_001134742.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
gi|209735590|gb|ACI68664.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
Length = 281
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFDNDVQAG 257
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +AL G+K + +KI FA
Sbjct: 258 AAREALQGFKIT----QTNAMKISFA 279
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 145
>gi|156548050|ref|XP_001606482.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Nasonia vitripennis]
gi|345485456|ref|XP_003425274.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Nasonia vitripennis]
Length = 230
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 155 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 206
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 207 AAKDALQGFKIT----PSHAMKISFA 228
>gi|383847977|ref|XP_003699629.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Megachile
rotundata]
Length = 231
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 156 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 207
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 208 AAKDALQGFKIT----PSHAMKISFA 229
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G++ L V+ LP + T+ E+ LF
Sbjct: 19 PTCNNTANG-PTTVNNNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 77
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 78 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 126
>gi|303320063|ref|XP_003070031.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109717|gb|EER27886.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 615
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEFDD A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFDDISWATK 455
Query: 143 AMDALHGYKFDDK 155
++ L+GY+ +
Sbjct: 456 SLKELYGYELSNS 468
>gi|119183856|ref|XP_001242909.1| hypothetical protein CIMG_06805 [Coccidioides immitis RS]
gi|392865813|gb|EAS31646.2| RNA binding protein [Coccidioides immitis RS]
Length = 615
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEFDD A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFDDISWATK 455
Query: 143 AMDALHGYKFDDK 155
++ L+GY+ +
Sbjct: 456 SLKELYGYELSNS 468
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 17 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 75
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 76 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 124
>gi|320031854|gb|EFW13811.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 615
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEFDD A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFDDISWATK 455
Query: 143 AMDALHGYKFDDK 155
++ L+GY+ +
Sbjct: 456 SLKELYGYELSNS 468
>gi|307190556|gb|EFN74543.1| U1 small nuclear ribonucleoprotein A [Camponotus floridanus]
Length = 184
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 109 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 160
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 161 AAKDALQGFKIT----PSHAMKISFA 182
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 23 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 81
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 82 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 130
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|307195443|gb|EFN77329.1| U2 small nuclear ribonucleoprotein B'' [Harpegnathos saltator]
Length = 231
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 156 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 207
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 208 AAKDALQGFKIT----PSHAMKISFA 229
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G++ L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|347966395|ref|XP_003435907.1| AGAP013145-PC [Anopheles gambiae str. PEST]
gi|333470080|gb|EGK97508.1| AGAP013145-PC [Anopheles gambiae str. PEST]
Length = 243
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F+ A
Sbjct: 78 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFNTRAGA 135
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 136 EAAKQDLQQGVRFD---PDMPQTIRLEFA 161
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|380024353|ref|XP_003695965.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Apis
florea]
Length = 231
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 156 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 207
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 208 AAKDALQGFKIT----PSHAMKISFA 229
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G++ L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|270047496|ref|NP_001161808.1| U1 small nuclear ribonucleoprotein A [Apis mellifera]
Length = 231
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 156 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 207
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 208 AAKDALQGFKIT----PSHAMKISFA 229
>gi|384499199|gb|EIE89690.1| hypothetical protein RO3G_14401 [Rhizopus delemar RA 99-880]
Length = 400
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 65 VPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PS R +A + + N L+V LP + E+ LF +GY+ + R
Sbjct: 277 TPSLSRLSAATMDQNPPCNTLYVGNLPLCTNQEELRSLFSKCLGYKRMSF-----RIKSQ 331
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDD 154
+ +CFVEF+D CA AM L G+ +
Sbjct: 332 QQGPMCFVEFEDVLCASQAMSQLQGFALSN 361
>gi|387018112|gb|AFJ51174.1| u2 small nuclear ribonucleoprotein B-like [Crotalus adamanteus]
Length = 225
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF++ LP + +S LF F G++E+R++ P R + FVEF++ A
Sbjct: 150 NHILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----ISFVEFENEGQAG 201
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI +A
Sbjct: 202 AARDALQGFKI----TPSHAMKITYA 223
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 47 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 105
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 106 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 154
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G++ L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|332022263|gb|EGI62578.1| U2 small nuclear ribonucleoprotein B'' [Acromyrmex echinatior]
Length = 184
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 109 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSG 160
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI FA
Sbjct: 161 AAKDALQGFKIT----PSHAMKISFA 182
>gi|428185283|gb|EKX54136.1| hypothetical protein GUITHDRAFT_100384 [Guillardia theta CCMP2712]
Length = 424
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ G+P DC RE+ ++FR F G+R +H+ + +++ FV F+ P A A
Sbjct: 137 LFLSGIPYDCRAREIYNMFRLFPGFR-YSTLHRNGK------ILVAFVTFETPDQAINAG 189
Query: 145 DALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
++G +FD +L++ AH +P D
Sbjct: 190 RQVNGTRFDPYV--RLSLRVHVAHRTSTIPRD 219
>gi|407921246|gb|EKG14398.1| hypothetical protein MPH_08387 [Macrophomina phaseolina MS6]
Length = 1116
Score = 46.2 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 68 SLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
S+++ P+ +G +FV + T +EV L G+ +RV PR G R
Sbjct: 798 SIKDRRHGPIYEGRE--VFVGNVDMSVTDQEVQDLVSSLDGFVNVRV----PRNLGGRGK 851
Query: 128 VLCFVEFDDPKCARTAMDALHGYKFDDK 155
+ FVEFD P A+ +AL+ +F D+
Sbjct: 852 GVAFVEFDTPDNAKKGAEALNAKEFKDR 879
>gi|159475870|ref|XP_001696037.1| hypothetical protein CHLREDRAFT_104778 [Chlamydomonas reinhardtii]
gi|158275208|gb|EDP00986.1| predicted protein [Chlamydomonas reinhardtii]
Length = 269
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LFV L E+ LF G+R+++++ + P+ T L FVEFDD A T
Sbjct: 168 NTLFVGNLSDSVDENELRSLFSGSPGFRQLKLM-RGPKAT------LGFVEFDDTGSAIT 220
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKC 181
A +A + D +++QF+ PF D D +C
Sbjct: 221 AHNAQQNAMLNSS--DRGPIRVQFSKNPFGRKRDVDGRC 257
>gi|242247219|ref|NP_001156146.1| U1 small nuclear ribonucleoprotein A-like [Acyrthosiphon pisum]
gi|239790514|dbj|BAH71814.1| ACYPI003668 [Acyrthosiphon pisum]
Length = 224
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + T +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 149 NQILFLTNLPDETTEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEHQSN 200
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
TA +L+G+K +PT +KI FA
Sbjct: 201 TAKLSLNGFKI------TPTHAMKITFA 222
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
+ N S K +S + V LP + TR++V LF F + +RV P++ A
Sbjct: 730 KGNNTSSKNKTKSAKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGF 785
Query: 130 CFVEFDDPKCARTAMDALHG 149
F+EF PK A AMD L G
Sbjct: 786 AFIEFLLPKEAENAMDQLQG 805
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 77 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 135
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 136 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 184
>gi|149041255|gb|EDL95188.1| rCG27500, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 59 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 110
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 111 RDALQGFKIT----PSHAMKITYA 130
>gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
Length = 253
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LFV LP T + LF + G++E+R+I +P + F+E+ D +
Sbjct: 178 NSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAKPG--------IAFIEYGDEMQST 229
Query: 142 TAMDALHGYKFDDKKP 157
AM AL G+K + P
Sbjct: 230 VAMQALQGFKITAENP 245
>gi|391342685|ref|XP_003745646.1| PREDICTED: uncharacterized protein LOC100903800 [Metaseiulus
occidentalis]
Length = 319
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 63 NGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRT 122
N P +L + S + E LFV GLP D RE+ LFR + GY + K +
Sbjct: 7 NESPMTLSQSMDSVNTEEEVRTLFVSGLPMDAKPRELYLLFRAYKGYEG--SLLKVTSKN 64
Query: 123 GDRAMVLCFVEFDDPKCARTAMDAL-HGYKFDDKKPDSP-TLKIQFA 167
G + + FV F A A L G +FD PD P T++++FA
Sbjct: 65 GKTSSPVGFVTFSTRAGAEAAKQELQQGVRFD---PDLPQTIRLEFA 108
>gi|351722454|ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LF+ LP D T + LF + G++E+R++ +P + FVE+ D +
Sbjct: 166 NNILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETKPG--------IAFVEYGDEMQST 217
Query: 142 TAMDALHGYKFDDKKP 157
AM L +K + P
Sbjct: 218 VAMQTLQCFKITPQNP 233
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTITNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 145
>gi|327260920|ref|XP_003215280.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Anolis
carolinensis]
Length = 224
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 151 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEGQAGAA 202
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 203 RDALQGFKI----TPSHAMKITYA 222
>gi|840823|emb|CAA44752.1| U2-snRNP-specific b'' [Mus musculus]
Length = 123
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 50 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 101
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 102 RDALQGFKIT----PSHAMKITYA 121
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|355784710|gb|EHH65561.1| U2 small nuclear ribonucleoprotein B'' [Macaca fascicularis]
Length = 225
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKI----TTSHAMKITYA 223
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LF+ GLP D RE+ +LFR F GY + + P +T F F D + A
Sbjct: 66 EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL--RTPTQT---TQPFAFAVFSDQQSA 120
Query: 141 RTAMDALHGYKFDDKK 156
AM A++G FD +K
Sbjct: 121 VGAMHAVNGMVFDLEK 136
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|148696477|gb|EDL28424.1| mCG19497, isoform CRA_a [Mus musculus]
Length = 132
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 59 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 110
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 111 RDALQGFKIT----PSHAMKITYA 130
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 38 PTCNNTANG-PTTITNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 96
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 97 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 145
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 23 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 81
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 82 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 130
>gi|326433216|gb|EGD78786.1| hypothetical protein PTSG_01762 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV +P T +++LF+ F G++E+R + P + FVE+D+P + A
Sbjct: 389 ILFVQNIPAGTTAERITNLFKQFAGFKEVRTVPSRPD--------IAFVEYDNPMQSGYA 440
Query: 144 MDALHGYK 151
LH ++
Sbjct: 441 KVQLHQHE 448
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ +LFR F GY + R + F F D A AM
Sbjct: 75 LFVAGLPDDIKPREMYNLFREFPGYESSHL-----RTPSQNSQPFAFATFTDQPSAVAAM 129
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
AL+G FD +K TL I A
Sbjct: 130 HALNGMVFDLEK--GSTLYIDLA 150
>gi|444319050|ref|XP_004180182.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
gi|387513224|emb|CCH60663.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
Length = 420
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++P+ A A+
Sbjct: 109 LFVRPFPFDVQESELNEIFAPFGAMKEVKILNG-----------FAFVEFEEPESASKAI 157
Query: 145 DALHGYKFDDKKPDSPTLKIQFAHFP 170
+ ++G F D+ L++ F+ P
Sbjct: 158 EEVNGKTFADQ-----PLEVLFSKLP 178
>gi|189234175|ref|XP_968800.2| PREDICTED: similar to RE20544p [Tribolium castaneum]
Length = 187
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F+ A
Sbjct: 24 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFNTRAGA 81
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 82 EAAKQDLQQGVRFD---PDMPQTIRLEFA 107
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRR-----TGDRAMVLCFVE 133
+ E LFV GLP D RE LF+ F G+ I K+P R + F+
Sbjct: 40 REELRTLFVSGLPQDVKEREFYLLFQGFSGFE--CAIVKQPVRNVKLPNNQPLGPVAFLT 97
Query: 134 FDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
F K A TA D HG+ D + D+ +KI+FA
Sbjct: 98 FASRKDAETAKDKFHGFALDPQV-DNLVMKIEFA 130
>gi|358054072|dbj|GAA99871.1| hypothetical protein E5Q_06574 [Mixia osmundae IAM 14324]
Length = 302
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP + + LF F E+R+I P R G + FVEF D +
Sbjct: 228 NKILFVQNLPDSVNKDALETLFTQFPNLSEVRMI---PGRKG-----IAFVEFTDETSSG 279
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +ALH K+++ K +K+ FA
Sbjct: 280 VAREALHNQKYEESK-----IKVTFA 300
>gi|195995899|ref|XP_002107818.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
gi|190588594|gb|EDV28616.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
Length = 204
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + T +S LF F GY+E+R++ P R + FVEF+ A
Sbjct: 129 NKILFLTNLPEETTELMLSMLFNQFPGYKEVRLV---PGRHD-----IAFVEFESEIQAA 180
Query: 142 TAMDALHGYK 151
TA ++L+G+K
Sbjct: 181 TARNSLNGFK 190
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
K + LF LP D T RE+S LFR G+ +R++ + D +CF +F
Sbjct: 550 KDANTTLFFSNLPKDVTERELSILFRFMRGFLNVRLVQR------DGKYPICFCDFRGVP 603
Query: 139 CARTAMDALHGYKFDDKKPDS 159
A AM+ L+G+K D K S
Sbjct: 604 SAAIAMEMLNGFKMDPKDTSS 624
>gi|355721048|gb|AES07135.1| small nuclear ribonucleoprotein polypeptide B [Mustela putorius
furo]
Length = 99
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 26 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 77
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 78 RDALQGFKIT----PSHAMKITYA 97
>gi|387915158|gb|AFK11188.1| RNA binding protein with multiple splicing 2 [Callorhinchus milii]
Length = 180
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 93 DCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGY 150
D RE+ LFRPF GY I++ K+P + FV FD A A +AL+G
Sbjct: 2 DIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDSRTGAEAAKNALNGI 52
Query: 151 KFDDKKPDSPTLKIQFA 167
+FD + P TL+++FA
Sbjct: 53 RFDPENPQ--TLRLEFA 67
>gi|149640848|ref|XP_001514376.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Ornithorhynchus anatinus]
gi|345329106|ref|XP_003431335.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Ornithorhynchus anatinus]
Length = 225
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|149041256|gb|EDL95189.1| rCG27500, isoform CRA_b [Rattus norvegicus]
Length = 203
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 130 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 181
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 182 RDALQGFKIT----PSHAMKITYA 201
>gi|297716585|ref|XP_002834591.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Pongo abelii]
Length = 99
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 26 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 77
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 78 RDALQGFKIT----PSHAMKITYA 97
>gi|344255667|gb|EGW11771.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 180
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 107 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 158
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 159 RDALQGFKIT----PSHAMKITYA 178
>gi|331231467|ref|XP_003328397.1| hypothetical protein PGTG_09691 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307387|gb|EFP83978.1| hypothetical protein PGTG_09691 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 315
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + + LF+ + E+R I P R+ + FVE+ D +
Sbjct: 240 NKILFIQNLPENAGKDALEVLFKQYPNLVEVRTI---PGRSN-----IAFVEYVDATSSG 291
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YKFD + +K+ FA
Sbjct: 292 VAKDALHNYKFDGEH----KIKVTFA 313
>gi|58331942|ref|NP_001011120.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
gi|54038268|gb|AAH84519.1| hypothetical LOC496533 [Xenopus (Silurana) tropicalis]
gi|89268683|emb|CAJ82680.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
Length = 223
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 150 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENETEAGAA 201
Query: 144 MDALHGYKFDDKKPDSPTLKIQFAH 168
DAL G+K S +KI +A+
Sbjct: 202 RDALQGFKI----TPSHAMKITYAN 222
>gi|217069866|gb|ACJ83293.1| unknown [Medicago truncatula]
Length = 211
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 64 GVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
G +S R +G+ +N+LF++ LP + T R + LF + G++E+R+I +P
Sbjct: 140 GSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAKPG--- 196
Query: 124 DRAMVLCFVEFDD 136
+ FV+F+D
Sbjct: 197 -----IAFVDFED 204
>gi|195554301|ref|XP_002076873.1| GD24751 [Drosophila simulans]
gi|194202891|gb|EDX16467.1| GD24751 [Drosophila simulans]
Length = 169
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PSS N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 77 PSSAENSNPNTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 132
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 133 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 167
>gi|148696478|gb|EDL28425.1| mCG19497, isoform CRA_b [Mus musculus]
Length = 203
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 130 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 181
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 182 RDALQGFKIT----PSHAMKITYA 201
>gi|90086371|dbj|BAE91738.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 74 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 125
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 126 RDALQGFKIT----PSHAMKITYA 145
>gi|390338611|ref|XP_781047.3| PREDICTED: CUGBP Elav-like family member 3-A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 520
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 73 AGSPLKKGESN----LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV 128
A +P ++GE LF+ LP + E++ +F PF +V R +++
Sbjct: 421 AAAPQREGEYGPEGCNLFIYHLPQEFGDAELTQMFVPFGQVISSKVFVD---RVTNQSKC 477
Query: 129 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQ 165
FV FD+P+CA+ A+ A++G++ K+ LK+Q
Sbjct: 478 FGFVSFDNPQCAQAAIQAMNGFQIGMKR-----LKVQ 509
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----YAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A+ A+ HGY FD + L+++ AH
Sbjct: 51 EFEDPRDAQDAIYGRHGYDFDGHR-----LRVELAH 81
>gi|225683351|gb|EEH21635.1| RNA-binding protein Scw1 [Paracoccidioides brasiliensis Pb03]
Length = 594
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 392 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 444
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 445 ALHELYGYQLSNS 457
>gi|194888638|ref|XP_001976948.1| GG18748 [Drosophila erecta]
gi|190648597|gb|EDV45875.1| GG18748 [Drosophila erecta]
Length = 216
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PSS N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PSSAENSNPNTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|432881561|ref|XP_004073841.1| PREDICTED: CUGBP Elav-like family member 3-like [Oryzias latipes]
Length = 374
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+TA+
Sbjct: 291 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPSSAQTAI 347
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 348 QAMNGFQIGMKR-----LKVQL 364
>gi|328702215|ref|XP_001952194.2| PREDICTED: protein couch potato-like [Acyrthosiphon pisum]
Length = 295
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 23 VGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGES 82
+G T V K Y + + D+ + ++ + V L+ + KK E
Sbjct: 1 MGCTWVVEWKVYG--------LSKNIDVHAIVRESLGIEVISVALPLKEDYSLRQKKNEK 52
Query: 83 NLL----FVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
LL FV GLP D RE+ LFR + GY + K + G A + FV F
Sbjct: 53 KLLVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTSKNGKTASPVGFVTFQTRA 110
Query: 139 CARTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A A D G +FD PD P T++++FA
Sbjct: 111 GAEAAKQDLQQGVRFD---PDMPQTIRLEFA 138
>gi|428182625|gb|EKX51485.1| hypothetical protein GUITHDRAFT_159319 [Guillardia theta CCMP2712]
Length = 237
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 69 LRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV 128
++ P+ K +LF++ LP + + LF+ F G E+R++ P +TG
Sbjct: 152 MQEETNQPINK----ILFLERLPDEINVEMLQTLFKQFPGLAEVRMV---PGKTG----- 199
Query: 129 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+ FVEF+ A TA D L G+K + TL+I +A
Sbjct: 200 IAFVEFESDAQAATARDTLQGFKL----TPTNTLRITYAK 235
>gi|358385005|gb|EHK22602.1| hypothetical protein TRIVIDRAFT_22864, partial [Trichoderma virens
Gv29-8]
Length = 437
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF P GY+ + R P +CFVEF+D A
Sbjct: 297 NTLYVGNLPIDTSEEELKALFSPVRGYKRLCFRTKQNGP---------MCFVEFEDIGHA 347
Query: 141 RTAMDALHGY 150
A+ L+G+
Sbjct: 348 TKALSQLYGW 357
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GL T+ ++ ++FR +++R++ R G + L +VEFDD CA
Sbjct: 770 EKNKLFVKGLSPTTTKEDLENIFRVHGSLKDVRIV---TYRNG-HSKGLAYVEFDDENCA 825
Query: 141 RTAMDALHGYKFDDK 155
A+ A G DK
Sbjct: 826 AKALVATDGMTIADK 840
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
MD LHG
Sbjct: 817 ENVMDQLHG 825
>gi|295657738|ref|XP_002789435.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283857|gb|EEH39423.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 583
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 381 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 433
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 434 ALHELYGYQLSNS 446
>gi|195501252|ref|XP_002097723.1| GE24318 [Drosophila yakuba]
gi|194183824|gb|EDW97435.1| GE24318 [Drosophila yakuba]
Length = 256
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 29/126 (23%)
Query: 69 LRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV 128
L NNA S +G++NL+ ++ LP D T EV LF F R+ ++I RRTG +
Sbjct: 30 LINNAYS---RGQTNLI-LNYLPQDMTELEVHRLFSKFGEIRKAKIIRH--RRTG----I 79
Query: 129 LC---FVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH-----------FPFHLP 174
C FV++ P+ A A +++ GY+ K+ LK+ FA + +LP
Sbjct: 80 SCCYGFVDYVSPRQAAAAQESMDGYETRGKR-----LKVAFARPSEDPPRNNNLYVANLP 134
Query: 175 SDGDEK 180
+ DEK
Sbjct: 135 TYMDEK 140
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 31/111 (27%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEF 134
L++ E LFV GLP D RE+ LFRPF GY I++ K+P + FV F
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSF 68
Query: 135 DDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHF-PFHLPSDGDEKCTPR 184
D A A +AL+ + Q+ HF P L KC PR
Sbjct: 69 DSRSEAEAAKNALN-------------MSSQYLHFTPVAL------KCGPR 100
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 761 KSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEA 816
Query: 141 RTAMDALHG 149
MD LHG
Sbjct: 817 ENVMDQLHG 825
>gi|157819927|ref|NP_001102062.1| U2 small nuclear ribonucleoprotein B'' [Rattus norvegicus]
gi|354492046|ref|XP_003508163.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cricetulus
griseus]
gi|149041257|gb|EDL95190.1| rCG27500, isoform CRA_c [Rattus norvegicus]
gi|197245976|gb|AAI68760.1| Small nuclear ribonucleoprotein polypeptide B'' [Rattus norvegicus]
Length = 225
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|226286959|gb|EEH42472.1| RNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 380 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 432
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 433 ALHELYGYQLSNS 445
>gi|395507829|ref|XP_003758221.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Sarcophilus
harrisii]
Length = 225
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|291389004|ref|XP_002711008.1| PREDICTED: small nuclear ribonucleoprotein polypeptide B''
[Oryctolagus cuniculus]
Length = 225
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|195476907|ref|XP_002100029.1| GE16390 [Drosophila yakuba]
gi|194187553|gb|EDX01137.1| GE16390 [Drosophila yakuba]
Length = 216
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PSS N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PSSAENSNPNTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|224034387|gb|ACN36269.1| unknown [Zea mays]
gi|413944623|gb|AFW77272.1| hypothetical protein ZEAMMB73_456532 [Zea mays]
Length = 254
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R+I +P + FVE+ D A
Sbjct: 179 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAKPG--------IAFVEYGDETQAT 230
Query: 142 TAMDALHGYKF 152
AM+ L +K
Sbjct: 231 AAMNNLQSFKI 241
>gi|195340669|ref|XP_002036935.1| GM12396 [Drosophila sechellia]
gi|194131051|gb|EDW53094.1| GM12396 [Drosophila sechellia]
Length = 216
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PSS N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PSSAENSNPNTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|426200920|gb|EKV50843.1| hypothetical protein AGABI2DRAFT_189187 [Agaricus bisporus var.
bisporus H97]
Length = 292
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP T+ ++ LF + E+R+I P + + FVE+ D A
Sbjct: 217 NKILFLQNLPESVTKDQLMSLFSQYPNLYEVRMI---PTKKD-----IAFVEYVDEGSAG 268
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YK D + +KI FA
Sbjct: 269 VAKDALHNYKLDGEN----KIKITFA 290
>gi|17737284|ref|NP_511045.1| sans fille [Drosophila melanogaster]
gi|1173325|sp|P43332.1|SNRPA_DROME RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A; AltName: Full=Sex
determination protein snf
gi|157172|gb|AAA28441.1| small nuclear ribonucleoprotein [Drosophila melanogaster]
gi|463051|gb|AAA28903.1| nuclear protein [Drosophila melanogaster]
gi|7290566|gb|AAF46017.1| sans fille [Drosophila melanogaster]
gi|16769640|gb|AAL29039.1| LD45302p [Drosophila melanogaster]
gi|220944458|gb|ACL84772.1| snf-PA [synthetic construct]
gi|220954252|gb|ACL89669.1| snf-PA [synthetic construct]
Length = 216
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PSS N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PSSAENSNPNAQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|395858003|ref|XP_003801365.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Otolemur
garnettii]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|417397429|gb|JAA45748.1| Putative spliceosomal protein snrnp-u1a/u2b [Desmodus rotundus]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B'' [Mus musculus]
gi|52783420|sp|Q9CQI7.1|RU2B_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|12847289|dbj|BAB27510.1| unnamed protein product [Mus musculus]
gi|12851400|dbj|BAB29026.1| unnamed protein product [Mus musculus]
gi|20072417|gb|AAH26794.1| U2 small nuclear ribonucleoprotein B [Mus musculus]
gi|126035620|gb|ABN72533.1| U2 small nuclear ribonucleoprotein B [Mus spretus]
gi|148696479|gb|EDL28426.1| mCG19497, isoform CRA_c [Mus musculus]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 45.1 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP T+ E+ +F+ +E+R++ R G + L +VEF D A
Sbjct: 751 EKNKLFVKGLPVSTTKEELEEIFKVHGALKEVRIV---TYRNG-HSKGLAYVEFMDENSA 806
Query: 141 RTAMDALHGYKFDDK 155
A+ A G K DK
Sbjct: 807 AKALLATDGMKIADK 821
>gi|444729539|gb|ELW69952.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|403263452|ref|XP_003924046.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Saimiri
boliviensis boliviensis]
gi|197692169|dbj|BAG70048.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|197692419|dbj|BAG70173.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|390601524|gb|EIN10918.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 247
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVI-HKEPRRTGDRAMVLCFVEFDDPKCARTA 143
L LP + T +S LF+ + G+ ++V P TG +A+ + +V F+ P+ A A
Sbjct: 169 LMASNLPQEVTEDMLSVLFQQYQGFLSVQVSPTATPDATG-QAIKMAYVVFESPQLAMVA 227
Query: 144 MDALHGYKFDDKKP 157
DALHG+ P
Sbjct: 228 KDALHGFNLKKNWP 241
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYRE--IRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D +R++ LFR GY + ++ K+P G+++ + F F+ + A
Sbjct: 18 LFVSGLPVDVKQRDLHLLFRGLPGYLDSILKTSTKQPGH-GNKSGPVAFATFETRELANE 76
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A L G++FD DS L++ FA
Sbjct: 77 AKAILQGFQFDPDVTDS-HLRVDFA 100
>gi|388583280|gb|EIM23582.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 263
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ LP+ ++ ++ +F + E+RVI P + FVE+ D + A
Sbjct: 190 ILFIQNLPSGTSKEKLEEIFGQYPNLAEVRVIPARPD--------IAFVEYMDESSSSVA 241
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL+ Y+ + KP +K+ FA
Sbjct: 242 KDALNNYQIESDKP----IKVTFA 261
>gi|344279401|ref|XP_003411476.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Loxodonta
africana]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|237829859|ref|XP_002364227.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
ME49]
gi|211961891|gb|EEA97086.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
ME49]
gi|221487300|gb|EEE25532.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
GT1]
gi|221507093|gb|EEE32697.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
VEG]
Length = 385
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF++ LP D T + LF G E+R + RR + FVE+D+ A
Sbjct: 312 NKVLFLENLPEDATMEGLVSLFSKHAGMIEVRPVLW--RR-------VAFVEYDNEMLAA 362
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
AM+AL GY + ++KI +A
Sbjct: 363 NAMNALQGYNMNGS-----SIKITYA 383
>gi|114681082|ref|XP_514523.2| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 5 [Pan
troglodytes]
gi|114681084|ref|XP_001137830.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 4 [Pan
troglodytes]
gi|296200238|ref|XP_002747509.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Callithrix jacchus]
gi|296200240|ref|XP_002747510.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 3
[Callithrix jacchus]
Length = 225
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|4507123|ref|NP_003083.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|38149981|ref|NP_937863.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|332238115|ref|XP_003268248.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Nomascus leucogenys]
gi|332238117|ref|XP_003268249.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Nomascus leucogenys]
gi|397478615|ref|XP_003810638.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Pan
paniscus]
gi|397478617|ref|XP_003810639.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pan
paniscus]
gi|426391004|ref|XP_004061878.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Gorilla gorilla gorilla]
gi|426391006|ref|XP_004061879.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Gorilla gorilla gorilla]
gi|134095|sp|P08579.1|RU2B_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|340105|gb|AAA36796.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|17390031|gb|AAH18022.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|22477822|gb|AAH36737.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|119630689|gb|EAX10284.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|119630690|gb|EAX10285.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|123979922|gb|ABM81790.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|189066590|dbj|BAG35840.1| unnamed protein product [Homo sapiens]
gi|410226668|gb|JAA10553.1| small nuclear ribonucleoprotein polypeptide B [Pan troglodytes]
gi|410226670|gb|JAA10554.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410263358|gb|JAA19645.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410342435|gb|JAA40164.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|403283665|ref|XP_003933231.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Saimiri
boliviensis boliviensis]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|301787297|ref|XP_002929064.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Ailuropoda
melanoleuca]
gi|410954385|ref|XP_003983845.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Felis
catus]
gi|410954387|ref|XP_003983846.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Felis
catus]
gi|281346668|gb|EFB22252.1| hypothetical protein PANDA_019153 [Ailuropoda melanoleuca]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|123994687|gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|261861662|dbj|BAI47353.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKI----TPSHAMKITYA 223
>gi|349605397|gb|AEQ00652.1| U2 small nuclear ribonucleoprotein B''-like protein, partial [Equus
caballus]
Length = 197
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 124 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 175
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 176 RDALQGFKIT----PSHAMKITYA 195
>gi|359718900|ref|NP_001240769.1| U2 small nuclear ribonucleoprotein B'' [Equus caballus]
gi|328908863|gb|AEB61099.1| u2 small nuclear ribonucleoprotein B''-like protein [Equus
caballus]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|354542538|ref|NP_001238897.1| U2 small nuclear ribonucleoprotein B'' [Canis lupus familiaris]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|116175273|ref|NP_001070696.1| uncharacterized protein LOC768116 [Sus scrofa]
gi|426240670|ref|XP_004014217.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Ovis
aries]
gi|115371759|gb|ABI96204.1| RU2B [Sus scrofa]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|409084026|gb|EKM84383.1| hypothetical protein AGABI1DRAFT_110905 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 292
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP T+ ++ LF + E+R+I P + + FVE+ D A
Sbjct: 217 NKILFLQNLPESVTKDQLMSLFSQYPNLYEVRMI---PTKKD-----IAFVEYVDEGSAG 268
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YK D + +KI FA
Sbjct: 269 VAKDALHNYKLDGEN----KIKITFA 290
>gi|261201640|ref|XP_002628034.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590131|gb|EEQ72712.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|327352905|gb|EGE81762.1| RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 591
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 393 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 445
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 446 ALHELYGYQLSNS 458
>gi|348581624|ref|XP_003476577.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cavia
porcellus]
Length = 224
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 151 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 202
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 203 RDALQGFKI----TPSHAMKITYA 222
>gi|297706381|ref|XP_002830019.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pongo
abelii]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|154285786|ref|XP_001543688.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407329|gb|EDN02870.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 408
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 210 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 262
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 263 ALHELYGYQLSNS 275
>gi|55732648|emb|CAH93023.1| hypothetical protein [Pongo abelii]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|225558198|gb|EEH06482.1| RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 591
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 393 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 445
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 446 ALHELYGYQLSNS 458
>gi|386781069|ref|NP_001247823.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|402883260|ref|XP_003905142.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Papio
anubis]
gi|402883262|ref|XP_003905143.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Papio
anubis]
gi|402883264|ref|XP_003905144.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 3 [Papio
anubis]
gi|355563375|gb|EHH19937.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|380787253|gb|AFE65502.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|383414075|gb|AFH30251.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|384942630|gb|AFI34920.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
Length = 225
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|326428976|gb|EGD74546.1| hypothetical protein PTSG_05910 [Salpingoeca sp. ATCC 50818]
Length = 215
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G + +L+V LP T+ +V +LF F G E+R++ P +CFVE++ +
Sbjct: 138 GTNKILYVSHLPPTATKSDVHNLFAKFEGLVEVRMVDGRPD--------MCFVEYETARA 189
Query: 140 ARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ AM L G+ + TL + +A
Sbjct: 190 SAVAMQNLDGFSMG----EDNTLSVTYA 213
>gi|452000412|gb|EMD92873.1| hypothetical protein COCHEDRAFT_1223605 [Cochliobolus
heterostrophus C5]
Length = 561
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 427
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTPR 184
A++ L+GY + +++ F+ P + S + P+
Sbjct: 428 TKALNELYGYMLHNSVKGG--IRLSFSKNPLGVRSGQNSGLGPQ 469
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D +RE+ LFR GY E ++ + G A + FV F + A AM
Sbjct: 41 LFVSGLPMDAKQRELYLLFRSCRGY-ENSLLRITQSKDGGIASPVGFVTFSSAEDAEIAM 99
Query: 145 DALHGYKFD 153
AL FD
Sbjct: 100 KALQSALFD 108
>gi|351695324|gb|EHA98242.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 224
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 151 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 202
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 203 RDALQGFKI----TPSHAMKITYA 222
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----YAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A+ A+ HGY FD + L+++ AH
Sbjct: 51 EFEDPRDAQDAIYGRHGYDFDGHR-----LRVELAH 81
>gi|147902216|ref|NP_001085460.1| MGC80122 protein [Xenopus laevis]
gi|49257361|gb|AAH72799.1| MGC80122 protein [Xenopus laevis]
Length = 223
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A +A
Sbjct: 150 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENETEAGSA 201
Query: 144 MDALHGYK 151
DAL G+K
Sbjct: 202 RDALQGFK 209
>gi|47219454|emb|CAG10818.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+TA+
Sbjct: 330 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPSSAQTAI 386
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 387 QAMNGFQIGMKR-----LKVQL 403
>gi|299742799|ref|XP_001832784.2| RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298405354|gb|EAU89029.2| RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP T+ +++ LF + E+R+I P + + FVEF D +
Sbjct: 182 NKILFVQNLPESVTKDQLTTLFSQYPNLYEVRLI---PTKKD-----IAFVEFLDEASSG 233
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH +K D + +KI FA
Sbjct: 234 VAKDALHNFKIDGEN----KIKITFA 255
>gi|330917653|ref|XP_003297901.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
gi|311329202|gb|EFQ94032.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
Length = 559
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 375 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 425
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTPR 184
A++ L+GY + +++ F+ P + S + P+
Sbjct: 426 TKALNELYGYMLHNSVKGG--IRLSFSKNPLGVRSGQNSGMGPQ 467
>gi|189188620|ref|XP_001930649.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972255|gb|EDU39754.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 561
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 427
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTPR 184
A++ L+GY + +++ F+ P + S + P+
Sbjct: 428 TKALNELYGYMLHNSVKGG--IRLSFSKNPLGVRSGQNSGMGPQ 469
>gi|440893400|gb|ELR46188.1| U2 small nuclear ribonucleoprotein B'', partial [Bos grunniens
mutus]
Length = 233
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 160 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 211
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 212 RDALQGFKI----TPSHAMKITYA 231
>gi|239611843|gb|EEQ88830.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
Length = 531
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 382 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 434
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 435 ALHELYGYQLSNS 447
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDPK 138
E++ LFV L T ++ +F+P G+ RV K P+R G+ +M FVEF
Sbjct: 576 ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSA 635
Query: 139 CARTAMDALHGYKFD 153
AR A+ ++GYK D
Sbjct: 636 QARAALATMNGYKLD 650
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----YAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A+ A+ HGY FD + L+++ AH
Sbjct: 51 EFEDPRDAQDAIYGRHGYDFDGHR-----LRVELAH 81
>gi|50738734|ref|XP_419331.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Gallus
gallus]
gi|326914835|ref|XP_003203728.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Meleagris
gallopavo]
Length = 226
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 153 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENECQAGAA 204
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 205 RDALQGFKI----TPSHAMKITYA 224
>gi|408388147|gb|EKJ67837.1| hypothetical protein FPSE_11985 [Fusarium pseudograminearum CS3096]
Length = 571
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF GY+ + R P +CFVEFDD CA
Sbjct: 388 NTLYVGNLPGDASEEELKTLFSNARGYKRLCFRTKQNGP---------MCFVEFDDVSCA 438
Query: 141 RTAMDALHG 149
A+ +G
Sbjct: 439 TKALSDFYG 447
>gi|63592914|ref|XP_356179.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1 [Mus
musculus]
Length = 281
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 197 AQPLSENPPNHILFLTNLPEETNELMLSMLFTQFPGFKEVRLV---PGRHD-----IDFV 248
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A D L G+K +KI FA
Sbjct: 249 EFDNEVQAGAARDVLQGFKITQNN----AMKISFA 279
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
K S+ + V LP + +R++V LF F + +RV P++ A FVEF PK
Sbjct: 731 KAVSSKIIVKNLPFEASRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLIPK 786
Query: 139 CARTAMDALHG 149
A++AMD L G
Sbjct: 787 EAQSAMDQLQG 797
>gi|239790913|dbj|BAH71988.1| ACYPI002883 [Acyrthosiphon pisum]
Length = 169
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP CT+ ++ ++F+P+ +++RV+ R G + L +V+F+D A
Sbjct: 19 EKNKLFVKGLPFTCTKTDIENIFKPYGALKDVRVVT---FRNG-HSKGLAYVDFEDEVSA 74
Query: 141 RTAM 144
A+
Sbjct: 75 AQAL 78
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 44.7 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 68 SLRNNAGSPLKKGESNL---LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
S R S K + N+ + V LP + TR+++ LF F + +RV P++
Sbjct: 711 SHRQGTASTAKTSKKNINGKIIVKNLPFEATRKDIFELFSSFGQLKSVRV----PKKFDK 766
Query: 125 RAMVLCFVEFDDPKCARTAMDALHG 149
A FVEF PK A AMD L G
Sbjct: 767 SARGFAFVEFLLPKEAENAMDQLEG 791
>gi|328697641|ref|XP_003240396.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Acyrthosiphon pisum]
Length = 854
Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP CT+ ++ ++F+P+ +++RV+ R G + L +V+F+D A
Sbjct: 704 EKNKLFVKGLPFTCTKTDIENIFKPYGALKDVRVV---TFRNG-HSKGLAYVDFEDEVSA 759
Query: 141 RTAM 144
A+
Sbjct: 760 AQAL 763
>gi|328697639|ref|XP_001946245.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Acyrthosiphon pisum]
Length = 854
Score = 44.7 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP CT+ ++ ++F+P+ +++RV+ R G + L +V+F+D A
Sbjct: 704 EKNKLFVKGLPFTCTKTDIENIFKPYGALKDVRVV---TFRNG-HSKGLAYVDFEDEVSA 759
Query: 141 RTAM 144
A+
Sbjct: 760 AQAL 763
>gi|300796380|ref|NP_001179481.1| U2 small nuclear ribonucleoprotein B'' [Bos taurus]
gi|426240672|ref|XP_004014218.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Ovis
aries]
gi|296481542|tpg|DAA23657.1| TPA: small nuclear ribonucleoprotein polypeptide B'' [Bos taurus]
Length = 218
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 145 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 196
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 197 RDALQGFKI----TPSHAMKITYA 216
>gi|240277155|gb|EER40664.1| RNA binding protein [Ajellomyces capsulatus H143]
gi|325093977|gb|EGC47287.1| RNA binding protein [Ajellomyces capsulatus H88]
Length = 509
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 311 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQ-------NGPMCFVEFEDISFATK 363
Query: 143 AMDALHGYKFDDK 155
A+ L+GY+ +
Sbjct: 364 ALHELYGYQLSNS 376
>gi|148689095|gb|EDL21042.1| mCG15722 [Mus musculus]
Length = 281
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S LF F G++E+R++ P R + FV
Sbjct: 197 AQPLSENPPNHILFLTNLPEETNELMLSMLFTQFPGFKEVRLV---PGRHD-----IDFV 248
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ A A D L G+K +KI FA
Sbjct: 249 EFDNEVQAGAARDVLQGFKITQNN----AMKISFA 279
>gi|378730449|gb|EHY56908.1| hypothetical protein HMPREF1120_04972 [Exophiala dermatitidis
NIH/UT8656]
Length = 501
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R H P +CFVEF+D A
Sbjct: 312 NTLYVGNLPMDTSEDELKAIFSKQRGYKRLCFRTKHNGP---------MCFVEFEDISFA 362
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTP 183
A++ L+G + + +++ F+ P + + TP
Sbjct: 363 TKALNELYGAQLHNSVKGG--IRLSFSKNPLGVRAGQPGSATP 403
>gi|363731244|ref|XP_003640940.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Gallus
gallus]
Length = 207
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 134 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENECQAGAA 185
Query: 144 MDALHGYK 151
DAL G+K
Sbjct: 186 RDALQGFK 193
>gi|281202145|gb|EFA76350.1| U2 small nuclear ribonucleoprotein B [Polysphondylium pallidum
PN500]
Length = 246
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV+ LP C ++ LF F G++ I + T + + FVEFDD +
Sbjct: 171 NKILFVENLPEQCEEMMLNMLFSQFPGFQGISMT------TAKKG--VAFVEFDDDSKSA 222
Query: 142 TAMDALHGYKFDDKKP 157
AM L G+K +KP
Sbjct: 223 VAMTHLQGFKVTPEKP 238
>gi|449541608|gb|EMD32591.1| hypothetical protein CERSUDRAFT_118631 [Ceriporiopsis subvermispora
B]
Length = 272
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 64 GVPSSLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRT 122
VP S R N P + N +LF+ LP ++ ++ LF + E+R+I P +
Sbjct: 178 AVPVSKRPNVQMPDEYLPPNKILFLQNLPESVSKDQLMALFSQYPNLHEVRLI---PTKK 234
Query: 123 GDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FVE+ D A A +ALH YK D + +KI FA
Sbjct: 235 D-----IAFVEYLDEGSATVAKEALHNYKLDGEN----KIKITFA 270
>gi|309266585|ref|XP_003086803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 282
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E+R++ P R + FVEFD+ A
Sbjct: 207 NHILFLTNLPEETNELMLSMLFTQFPGFKEVRLV---PGRHD-----IDFVEFDNEVQAG 258
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A D L G+K +KI FA
Sbjct: 259 AARDVLQGFKITQNN----AMKISFA 280
>gi|348529973|ref|XP_003452486.1| PREDICTED: CUGBP Elav-like family member 3-like [Oreochromis
niloticus]
Length = 453
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+TA+
Sbjct: 370 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPSSAQTAI 426
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 427 QAMNGFQIGMKR-----LKVQL 443
>gi|171683983|ref|XP_001906933.1| hypothetical protein [Podospora anserina S mat+]
gi|170941952|emb|CAP67604.1| unnamed protein product [Podospora anserina S mat+]
Length = 570
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF GY+ + R P +CFVEF++ A
Sbjct: 373 NTLYVGNLPVDTSEEELKQLFSKQRGYKRLCFRTKQNGP---------MCFVEFENITFA 423
Query: 141 RTAMDALHGYKFDDK 155
A++ L+G++ +
Sbjct: 424 TKALNELYGFQLHNS 438
>gi|25012435|gb|AAN71324.1| RE20544p [Drosophila melanogaster]
Length = 194
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 27 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTSKNGKTASPVGFVTFHTRAGA 84
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 85 EAAKQDLQQGVRFD---PDMPQTIRLEFA 110
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 21 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTSKNGKTASPVGFVTFHTRAGA 78
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 79 EAAKQDLQQGVRFD---PDMPQTIRLEFA 104
>gi|225719260|gb|ACO15476.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 72 NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
NA P + + +LF+ LP + +S LF F G++E+R++ P R + F
Sbjct: 132 NAAHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAF 183
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
VEF++ + A ++L G+K P++ ++KI FA
Sbjct: 184 VEFENEVQSAAARESLQGFKIT---PNA-SMKISFA 215
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 21 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTSKNGKTASPVGFVTFHTRAGA 78
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 79 EAAKQDLQQGVRFD---PDMPQTIRLEFA 104
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N LFV GLP + T +E+ + F PF + + ++ ++P+ R+ CFVE++ R
Sbjct: 98 NNTLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLV-RDPKTNEQRSY--CFVEYETEAGFR 154
Query: 142 TAMDALHGYKFDDKKP 157
A++ H KF KKP
Sbjct: 155 NALN--HKDKFFIKKP 168
>gi|403411353|emb|CCL98053.1| predicted protein [Fibroporia radiculosa]
Length = 271
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP ++ ++ LF + E+R+I P + + FVE+ D A
Sbjct: 196 NKILFLQNLPESVSKDQLMALFSQYPNLHEVRLI---PTKKD-----IAFVEYMDEGSAT 247
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DALH YK D + +KI FA
Sbjct: 248 VAKDALHNYKLDGEN----KIKITFA 269
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S + V LP + TR++V LF F + +RV P++ A FVEF PK A
Sbjct: 722 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEAE 777
Query: 142 TAMDALHG 149
AMD L G
Sbjct: 778 AAMDQLQG 785
>gi|367008274|ref|XP_003678637.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
gi|359746294|emb|CCE89426.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
Length = 682
Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T +E+ HLF G+R + +K G M CFVEF+D A
Sbjct: 553 NTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGPM--CFVEFEDVSFATR 610
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 611 ALAELYG 617
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP T+ ++ +F+ +E+R++ R G + L +VEF D A
Sbjct: 767 EKNKLFVKGLPVSTTKEDLEEIFKVHGSLKEVRIV---TYRNG-HSKGLAYVEFVDENSA 822
Query: 141 RTAMDALHGYKFDDK 155
A+ A+ G K DK
Sbjct: 823 GKALLAIDGMKIGDK 837
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRNSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----YAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A+ A+ HGY FD + L+++ AH
Sbjct: 51 EFEDPRDAQDAIYGRHGYDFDGHR-----LRVELAH 81
>gi|171690714|ref|XP_001910282.1| hypothetical protein [Podospora anserina S mat+]
gi|170945305|emb|CAP71417.1| unnamed protein product [Podospora anserina S mat+]
Length = 248
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D + E++ +F F G+RE+R + P R+G + FVE+D A
Sbjct: 172 NRILFVQNLPDDFGKDELTGIFSRFEGFREVRTV---PGRSG-----IAFVEYDAEAGAI 223
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQF 166
TA + G K T+K+ +
Sbjct: 224 TAKENTAGMAL---KNGEKTMKVTY 245
>gi|452979111|gb|EME78874.1| hypothetical protein MYCFIDRAFT_144592, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 224
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 13/82 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L + P + + E+S LF F G++E+RV+ P R G L FVE++D A
Sbjct: 153 LILRDFPDEYGKDELSALFARFPGFKEVRVV---PGRKG-----LAFVEYEDELGGTAAK 204
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
+A+HG + DK T+K+ +
Sbjct: 205 EAMHGQELGDK-----TIKVTY 221
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
E LFV GLP D RE+ LFRPF GY I++ K+P + FV FD+
Sbjct: 19 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVTFDNRT 69
Query: 139 CARTAMDALH 148
A A +AL+
Sbjct: 70 GAEAAKNALN 79
>gi|68074359|ref|XP_679094.1| u1 small nuclear ribonucleoprotein a [Plasmodium berghei strain
ANKA]
gi|56499751|emb|CAH97936.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium berghei]
Length = 371
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 69 LRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV 128
++NN P K +LFV+ + + + +F+ F G+ E R+I P+R
Sbjct: 290 IQNNPVIPYK-----ILFVENVDENVNTEAFNDIFKAFSGFVEARII---PQRN------ 335
Query: 129 LCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ FV++ D A +AM AL Y+ K LKI +A
Sbjct: 336 VAFVDYTDESSATSAMKALQNYELQGSK-----LKISYA 369
>gi|344229622|gb|EGV61507.1| hypothetical protein CANTEDRAFT_94398 [Candida tenuis ATCC 10573]
Length = 526
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D T +E+ LF P G+R + R + +CFVEF+D A
Sbjct: 407 NTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKANASGSGSNNHGPMCFVEFEDVAHA 466
Query: 141 RTAMDALHG 149
A+ L+G
Sbjct: 467 TRALAELYG 475
>gi|167537765|ref|XP_001750550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770971|gb|EDQ84646.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S +LF++ LP+D T+ ++ LF+ F G++E+R++ P + FVE+++ A
Sbjct: 269 SPILFLENLPSDRTQEMLTALFKEFPGFKEVRLVPIRPD--------IGFVEYENEVQAS 320
Query: 142 TAMDALHG 149
A+ AL+G
Sbjct: 321 AALPALNG 328
>gi|397633851|gb|EJK71162.1| hypothetical protein THAOC_07424, partial [Thalassiosira oceanica]
Length = 449
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N +F+ GLP T +V L F R ++ EP T + CFVE+ DP +
Sbjct: 366 NKIFIGGLPYHLTESQVLELLGAFGSVRAFHLVKSEPSATTSKG--YCFVEYADPNITQV 423
Query: 143 AMDALHGYKFDDKKPDSPTLKIQ 165
A L+G K S + +Q
Sbjct: 424 ACMGLNGMDLGGGKQLSCRMAVQ 446
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
++ S + V LP + TR++V LF F + +RV P++ A FVEF P
Sbjct: 741 QRKPSGKIIVKNLPFEATRKDVFELFSSFGQLKSVRV----PKKFDKSARGFAFVEFLLP 796
Query: 138 KCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
K A AMD L G ++ L IQ+A
Sbjct: 797 KEAENAMDQLQGVHLLGRR-----LVIQYAQ 822
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 44.3 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 67 SSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA 126
S +++ S K +S + V L + TR ++ LF PF + +RV P++ A
Sbjct: 685 SQGKSDTASAKKGKKSPKIIVKNLAFESTRNDIFELFSPFGNLKSVRV----PKKFDKSA 740
Query: 127 MVLCFVEFDDPKCARTAMDALHG 149
FVEF K A +AMD L G
Sbjct: 741 RGFAFVEFSTLKEAESAMDQLQG 763
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ N+ SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNSCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|346473641|gb|AEO36665.1| hypothetical protein [Amblyomma maculatum]
Length = 183
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 108 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEIQSS 159
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 160 AAKEALQGFKI------TPTHAMKITFA 181
>gi|255531570|ref|YP_003091942.1| RNP-1 like RNA-binding protein [Pedobacter heparinus DSM 2366]
gi|255344554|gb|ACU03880.1| RNP-1 like RNA-binding protein [Pedobacter heparinus DSM 2366]
Length = 86
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP + T E+ LF V E+ ++ + G R++ FV+ + A+ A+
Sbjct: 5 LFVAGLPHNMTEIELLELFSNHVLVHELNIV-----KEGTRSLCYGFVQVQNQAFAQRAI 59
Query: 145 DALHGYKFDDKK 156
DAL+G D++K
Sbjct: 60 DALNGKLIDNRK 71
>gi|377835922|ref|XP_003688944.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP + +S LF F G++E ++ P R + + FVEFD+ A
Sbjct: 209 NHILFLTNLPEETNELMLSMLFTQFRGFKEAGLV---PGR-----LDIAFVEFDNEVQAG 260
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQF 166
A+DAL G+K +KI F
Sbjct: 261 AALDALQGFKITQNN----AMKISF 281
>gi|194763787|ref|XP_001964014.1| GF21334 [Drosophila ananassae]
gi|190618939|gb|EDV34463.1| GF21334 [Drosophila ananassae]
Length = 216
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
P+S N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PTSAENSNPNTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP T+ ++ +F+ +E+R++ R G + L ++EF D A
Sbjct: 756 EKNKLFVKGLPVSTTKEDLEEIFKVHGALKEVRIV---TYRNG-HSKGLAYIEFKDENSA 811
Query: 141 RTAMDALHGYKFDDK 155
A+ A G K DK
Sbjct: 812 AKALLATDGMKIADK 826
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 44.3 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 72 NAGSPLKKG-ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLC 130
+ G+ KG +S + V LP + TR+++ LF F + +RV P++ A
Sbjct: 726 STGTSKSKGKQSGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRV----PKKFDKSARGFA 781
Query: 131 FVEFDDPKCARTAMDALHG 149
F+EF PK A AMD L G
Sbjct: 782 FIEFLLPKEAENAMDQLQG 800
>gi|388582912|gb|EIM23215.1| hypothetical protein WALSEDRAFT_62589 [Wallemia sebi CBS 633.66]
Length = 200
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
K S LL+V G P D T E++ FR F R I H++ ++ A FV ++ P
Sbjct: 98 KFRSQLLYVTGQPLDSTEEELTRAFRKFGTVRWIEQSHQDRKKF---AFAYAFVMYESPD 154
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGD 178
A A Y+ D+ LKI F P P DG+
Sbjct: 155 FATKA------YENGVYIRDNIKLKISFFKRPIKYPKDGN 188
>gi|148909446|gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ GLP D RE+ +LFR G+ ++ + TG ++ F F + A A
Sbjct: 38 LFISGLPEDIKHREIYNLFRRRPGFEACQL-----KYTGRGYQIVAFAVFSHHQLALAAK 92
Query: 145 DALHGYKFDDKKPDS-PTLKIQFA 167
D L+G FD P++ TL I+ A
Sbjct: 93 DVLNGLTFD---PETGATLNIELA 113
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 21 EVRTLFVSGLPMDAKPRELYLLFRAYEGYE--GSLLKVTNKNGKTASPVGFVTFHTRSEA 78
Query: 141 RTAM-DALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 79 EAAKHDLQQGVRFD---PDMPQTIRLEFA 104
>gi|239938030|gb|ACS36114.1| RNA-binding protein Elav2 [Capitella teleta]
Length = 341
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV + D RE+ LF PF +++ VI + TG FV + + A +A
Sbjct: 261 VLFVYNIGPDADERELWQLFSPFGVVQKVNVIRDTAKNTGKG---FGFVSMANYQEAMSA 317
Query: 144 MDALHGYKFDDKKPDSPTLK 163
+ L+GYK+ KP + K
Sbjct: 318 IHNLNGYKYYQNKPLQVSFK 337
>gi|410911840|ref|XP_003969398.1| PREDICTED: CUGBP Elav-like family member 3-like [Takifugu rubripes]
Length = 458
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+TA+
Sbjct: 375 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPSSAQTAI 431
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 432 QAMNGFQIGMKR-----LKVQL 448
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ N+ SP+ G + L V+ LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTINNSCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP T+ ++ +F+ +E+R++ R G + L +VEF D A
Sbjct: 767 EKNKLFVKGLPVTTTKEDLEEIFKVHGSLKEVRIV---TYRNG-HSKGLAYVEFVDENSA 822
Query: 141 RTAMDALHGYKFDDK 155
A+ A+ G K DK
Sbjct: 823 GKALLAIDGMKIGDK 837
>gi|50288343|ref|XP_446600.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525908|emb|CAG59527.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + +E+ LF P G+R + +K +CFVEF+D A
Sbjct: 558 NTLYVGNLPPDTSEQELRQLFSPQPGFRRLSFKNKNNNGHTHGHGPMCFVEFEDVSFATR 617
Query: 143 AMDALHGYKFDDKKPDSP-TLKIQFAHFPFHLPSDGDEKCT 182
A+ L+G + +S +++ F+ P + + K T
Sbjct: 618 ALAELYGRQLPRTGANSKGGIRLSFSKNPLGVRGPNNRKMT 658
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 43.9 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 56 PTIPDVINGVPSSLRNNAGSP-LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV 114
P + +N V ++ G+ ++ ++ ++V L + E +F+P GY +
Sbjct: 591 PELAQKVNAVEATTSEKVGTEDIESLDTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVI 650
Query: 115 IHK-EPRRTGDR-AMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
K +P+R G +M FVEF D A AM A++G+ D K L+I+ +H
Sbjct: 651 RAKPDPKRPGKYLSMGFGFVEFKDKASAVAAMHAMNGFVLDGHK-----LEIKLSH 701
>gi|195448090|ref|XP_002071505.1| GK25839 [Drosophila willistoni]
gi|194167590|gb|EDW82491.1| GK25839 [Drosophila willistoni]
Length = 216
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 66 PSSLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
P+S N A S + N +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PASTENAAPSTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV+ LP C + LF F GY+E+ ++ + G + FVEF D + AM
Sbjct: 161 LFVENLPDKCDPMMLEMLFSQFPGYKEVHMVE---SKKG-----IAFVEFQDESKSGLAM 212
Query: 145 DALHGYKFDDKKP 157
+L +K +KP
Sbjct: 213 QSLQHFKVTQEKP 225
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K ++ G + + FV F A
Sbjct: 26 EVRTLFVSGLPMDAKPRELYLLFRAYKGYE--GSLLKVTQKNGKTSSPVGFVTFSSRAGA 83
Query: 141 RTAMDAL-HGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 84 EAAKQELQQGVRFD---PDLPQTIRLEFA 109
>gi|70947892|ref|XP_743519.1| u1 small nuclear ribonucleoprotein a [Plasmodium chabaudi chabaudi]
gi|56523052|emb|CAH75488.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium chabaudi
chabaudi]
Length = 444
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV+ + + + +F+ F G+ E R+I P+R + FV++ D A +A
Sbjct: 373 ILFVENVDENVNTEAFNDIFKAFSGFVEARII---PQRN------VAFVDYTDESSATSA 423
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
M AL Y+ K LKI +A
Sbjct: 424 MKALQDYELQGSK-----LKISYA 442
>gi|344257423|gb|EGW13527.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 113
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 32/127 (25%)
Query: 41 PNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVS 100
PNL + + AP NP +PD P + +LF++ LP + +S
Sbjct: 17 PNLANTQGNTAP--NPQVPDY----PPNY--------------ILFLNNLPEETNEMMLS 56
Query: 101 HLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSP 160
LF F G++E+ +I P R + FVEF++ A A DAL G+K S
Sbjct: 57 MLFNQFPGFKEVCLI---PGRHD-----IAFVEFENDGQAGAARDALQGFKIT----PSH 104
Query: 161 TLKIQFA 167
+KI +A
Sbjct: 105 AMKITYA 111
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-----FAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 51 EFEDPRDAEDAIQGRDGYNFDGNR-----LRVELAH 81
>gi|195497499|ref|XP_002096126.1| GE25503 [Drosophila yakuba]
gi|194182227|gb|EDW95838.1| GE25503 [Drosophila yakuba]
Length = 1140
Score = 43.9 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 458 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 515
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 516 EAAKQDLQGVRFD---PDMPQTIRLEFA 540
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+ + E+ LF GY+ + K P++ +CFVEF+D A
Sbjct: 282 NTLYVGNLPSSTNQEELRSLFSKCEGYKRMSFRIKSPQQGP-----MCFVEFEDVLYATQ 336
Query: 143 AMDALHGYKFDD 154
AM L G+ +
Sbjct: 337 AMTQLQGHALSN 348
>gi|189197515|ref|XP_001935095.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981043|gb|EDU47669.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 825
Score = 43.9 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 52 PGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
P + PT D++ P N + L+V L T ++ F+P G+R
Sbjct: 579 PVVKPTATDLLVDAPEPEATNTAT---------LYVRNLNFSTTTERLTEAFKPLSGFRS 629
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKK 156
V K + G +M FVEF++P+ A A+ A+ G+ + K
Sbjct: 630 ATVKTKMDPKRGVLSMGFGFVEFNNPETATAALRAMDGHDLEGHK 674
>gi|50508361|dbj|BAD30314.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|50510235|dbj|BAD31433.1| putative apoptosis-related RNA binding protein [Oryza sativa
Japonica Group]
gi|215687308|dbj|BAG91895.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 414
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ LP D EVS LF + R+++V+ + P++T +A +EF + AR A+
Sbjct: 19 LFIGMLPRDVKENEVSALFSQYGNIRQLKVL-RSPQKT-RKAAACAILEFGSKEHARAAI 76
Query: 145 DALHG 149
+AL+G
Sbjct: 77 EALNG 81
>gi|298707794|emb|CBJ30225.1| RNA binding / nucleic acid binding [Ectocarpus siliculosus]
Length = 252
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N+L+ GLP + T+ +S LF + G+ E R+ G +A F+EF D A
Sbjct: 179 NILYATGLPPEITQVMLSKLFEQYPGFSEARM------APGGQA----FIEFADQMQAGI 228
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFA 167
A++AL+G+K P L++ FA
Sbjct: 229 ALNALNGFKLSATNP----LQLAFA 249
>gi|320167853|gb|EFW44752.1| SNF [Capsaspora owczarzaki ATCC 30864]
Length = 262
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFV-GYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
N+LFV LP T+ ++ +LFR + G ++R++ P R + FVE+++ A
Sbjct: 188 NILFVQNLPQGITQDDIFNLFRGYTAGSCDVRLV---PNRAD-----IAFVEYENEGIAA 239
Query: 142 TAMDALHGYKFDD 154
A LHGYK D
Sbjct: 240 NAKATLHGYKMGD 252
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D +RE+ LFR GY E ++ + G A + FV F + A AM
Sbjct: 41 LFVSGLPMDAKQRELYLLFRSCRGY-ENSLLRITQSKDGGIASPVGFVTFSSAEDAEIAM 99
Query: 145 DALHGYKFD 153
AL FD
Sbjct: 100 KALQSALFD 108
>gi|47028317|gb|AAT09091.1| small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 227
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF LP T++ + LF+ + G++E+R++ +P + F+EF+D + +
Sbjct: 152 NKILFARNLPPQATKKMLETLFKQYDGFKEVRLVDGKPD--------IAFIEFNDAQESA 203
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAH 168
A + L +K + +K+ FA
Sbjct: 204 LAKEGLQNFKITSQN----AMKLTFAK 226
>gi|115666403|ref|XP_802063.2| PREDICTED: ELAV-like protein 2-like isoform 7 [Strongylocentrotus
purpuratus]
Length = 367
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 42 NLIGQRRDIAPGI--NP-TIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRRE 98
N IG R +A NP T DVI+ + N + G+ +FV LP DC
Sbjct: 246 NFIGPMRHMAHCFRFNPMTSSDVISHM------NLQAMTNNGQGWCIFVYNLPADCEDGL 299
Query: 99 VSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPD 158
+ LF P+ ++V+ +P + R FV + A +A++ L+GY+ + K+
Sbjct: 300 LWQLFGPYGAVTNVKVVRDQPNQ---RCKGYGFVNMLNYDEALSAINTLNGYQLNGKR-- 354
Query: 159 SPTLKIQF 166
TL++ F
Sbjct: 355 --TLQVSF 360
>gi|195046460|ref|XP_001992159.1| GH24608 [Drosophila grimshawi]
gi|193893000|gb|EDV91866.1| GH24608 [Drosophila grimshawi]
Length = 216
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 66 PSSLRN-NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD 124
PS+ N N + ++ + +LF+ LP + +S LF F G++E+R++ P R
Sbjct: 124 PSNAENANPNTQTEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD- 179
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPT--LKIQFA 167
+ FVEF + A +AL G+K +PT +KI FA
Sbjct: 180 ----IAFVEFTTELQSNAAKEALQGFKI------TPTHAMKITFA 214
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA- 143
LFV GLP D RE+ LFR + GY + K + G A + FV F A A
Sbjct: 12 LFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTSKNGKTASPVGFVTFSTRSGAEAAK 69
Query: 144 MDALHGYKFDDKKPDSP-TLKIQFA 167
D G +FD PD P T++++FA
Sbjct: 70 QDLQQGVRFD---PDMPQTIRLEFA 91
>gi|115433500|ref|XP_001216887.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189739|gb|EAU31439.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + +K+ +CFVEF+D A
Sbjct: 404 NTLYVGNLPPDASEEELKALFIKQRGYKRLCFRNKQ-------NGPMCFVEFEDVGTAGK 456
Query: 143 AMDALHGYKFDDK 155
+ L+GY+ +
Sbjct: 457 TLHELYGYRLSNS 469
>gi|169613152|ref|XP_001799993.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
gi|111061852|gb|EAT82972.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
Length = 572
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 389 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 439
Query: 141 RTAMDALHGYKFDDK 155
A++ L+GY +
Sbjct: 440 TKALNELYGYMLHNS 454
>gi|442619721|ref|NP_001014632.3| couch potato, isoform S [Drosophila melanogaster]
gi|440217575|gb|AAX52960.3| couch potato, isoform S [Drosophila melanogaster]
Length = 962
Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 440 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 497
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 498 EAAKQDLQGVRFD---PDMPQTIRLEFA 522
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 43.5 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 466 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 523
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 524 EAAKQDLQGVRFD---PDMPQTIRLEFA 548
>gi|431896232|gb|ELK05648.1| CUG-BP- and ETR-3-like factor 4 [Pteropus alecto]
Length = 379
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ LP + E+ +F PF +V DRA FV FD+P A+TA+
Sbjct: 300 LFIYHLPQEFGDAELMQMFLPFGNVISSKVFV-------DRATNQSFVSFDNPASAQTAI 352
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 353 QAMNGFQIGMKR-----LKVQL 369
>gi|452843907|gb|EME45842.1| hypothetical protein DOTSEDRAFT_71515 [Dothistroma septosporum
NZE10]
Length = 623
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF GYR + R P +CFVEF+D A
Sbjct: 386 NTLYVGNLPVDTSEDELKSLFMKQRGYRRLCFRTKQNGP---------MCFVEFEDISFA 436
Query: 141 RTAMDALHGY 150
A++ L+G+
Sbjct: 437 TKALNELYGH 446
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
++V LP+D +E+ +F Y EIR I + R + F++FDD + A+ A
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHK---YGEIRNIDIKSRSRD--SPAFAFIQFDDRRDAKEA 59
Query: 144 MDALHGYKFDDKKPDSPTLKIQF 166
+ A GY+FD K+ L+++F
Sbjct: 60 VRACDGYEFDGKR-----LRVEF 77
>gi|403216283|emb|CCK70780.1| hypothetical protein KNAG_0F01120 [Kazachstania naganishii CBS
8797]
Length = 635
Score = 43.5 bits (101), Expect = 0.038, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T +E+ HLF G+R R+ + G+ +CFVEFDD A
Sbjct: 497 NTLYVGNLPPDATEQELRHLFSAQQGFR--RLSFRNKNGNGNGHGPMCFVEFDDVSFATR 554
Query: 143 AMDALHGYKF 152
A+ L+G K
Sbjct: 555 ALAELYGSKL 564
>gi|431894149|gb|ELK03949.1| U2 small nuclear ribonucleoprotein B'' [Pteropus alecto]
Length = 291
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 214 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 265
Query: 144 MDALHGYK 151
DAL G+K
Sbjct: 266 RDALQGFK 273
>gi|242086969|ref|XP_002439317.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
gi|241944602|gb|EES17747.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
Length = 259
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R++ +P + FVE+ D A
Sbjct: 184 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPG--------IAFVEYGDEGQAT 235
Query: 142 TAMDALHGYK 151
AM+ L +K
Sbjct: 236 AAMNNLQSFK 245
>gi|85109011|ref|XP_962704.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|28924315|gb|EAA33468.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|39979161|emb|CAE85534.1| related to small nuclear ribonucleoprotein snRNP U1A [Neurospora
crassa]
Length = 247
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D T+ +++ +F F G+RE+R + P R+G + FVE+D A
Sbjct: 171 NRILFVQNLPDDFTKDDLTTIFSRFDGFREVRTV---PGRSG-----IAFVEYDAEAGAI 222
Query: 142 TAMDALHG 149
TA + G
Sbjct: 223 TAKENTAG 230
>gi|115473901|ref|NP_001060549.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|33354192|dbj|BAC81150.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|50510234|dbj|BAD31432.1| putative CUG triplet repeat RNA-binding protein 1 [Oryza sativa
Japonica Group]
gi|113612085|dbj|BAF22463.1| Os07g0663300 [Oryza sativa Japonica Group]
gi|215713561|dbj|BAG94698.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ LP D EVS LF + R+++V+ + P++T +A +EF + AR A+
Sbjct: 104 LFIGMLPRDVKENEVSALFSQYGNIRQLKVL-RSPQKT-RKAAACAILEFGSKEHARAAI 161
Query: 145 DALHG 149
+AL+G
Sbjct: 162 EALNG 166
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-----FAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 51 EFEDPRDAEDAIHGRDGYNFDGNR-----LRVELAH 81
>gi|396474256|ref|XP_003839528.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
gi|312216097|emb|CBX96049.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
Length = 572
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 384 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 434
Query: 141 RTAMDALHGYKFDDK 155
A++ L+GY +
Sbjct: 435 TKALNDLYGYMLHNS 449
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 43.5 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
K +S + V LP + TR++V LF F + +RV P++ FVEF P
Sbjct: 735 KNSKSGKIIVKNLPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSTRGFAFVEFLLP 790
Query: 138 KCARTAMDALHG 149
K A AMD L G
Sbjct: 791 KEAEDAMDQLQG 802
>gi|48429205|sp|Q01617.3|CPO_DROME RecName: Full=Protein couch potato
Length = 738
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 449 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 506
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 507 EAAKQDLQGVRFD---PDMPQTIRLEFA 531
>gi|226498478|ref|NP_001144860.1| uncharacterized protein LOC100277950 [Zea mays]
gi|195648000|gb|ACG43468.1| hypothetical protein [Zea mays]
Length = 254
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP + T + LF + G++E+R+I +P + FVE+ D
Sbjct: 179 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAKPG--------IAFVEYGDETQVT 230
Query: 142 TAMDALHGYKF 152
AM+ L +K
Sbjct: 231 AAMNNLQSFKI 241
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query: 52 PGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PG + D++ +P N + L+V L + ++ F+P G+R
Sbjct: 582 PGTKLSATDLLVDIPEPEATNTAT---------LYVRNLNFSTSTERLTEAFKPLSGFRS 632
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+V K + G +M FVEF+ P+ A A+ A+ GY + K L+I+ +H
Sbjct: 633 AKVKTKVDPKRGVLSMGFGFVEFNSPETATAALRAMDGYDLEGHK-----LQIKASH 684
Score = 36.6 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
KK S + + LP + +++EV LF P+ R +RV P++ + F EF
Sbjct: 700 KKAASTKIIIKNLPFEASKKEVRALFAPYGQLRSVRV----PKKFDASSRGFGFAEFTTK 755
Query: 138 KCARTAMDAL 147
+ A AM+AL
Sbjct: 756 RDAVNAMNAL 765
>gi|401415852|ref|XP_003872421.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488645|emb|CBZ23892.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 923
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV--LCFVEFDDPKCART 142
LFV +P DCTR ++ LF F R++ +HK+ D AMV + FV + + A
Sbjct: 321 LFVRNVPLDCTRTDLEELFGAFGSVRQV-TLHKDTSPVQDEAMVRLIAFVIYTEEGAAER 379
Query: 143 AMDALHGYK 151
A +H K
Sbjct: 380 AAREVHNTK 388
>gi|195396809|ref|XP_002057021.1| GJ16850 [Drosophila virilis]
gi|194146788|gb|EDW62507.1| GJ16850 [Drosophila virilis]
Length = 216
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFTTELQSN 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAKEALQGFKI------TPTHAMKITFA 214
>gi|357611617|gb|EHJ67566.1| putative Protein couch potato [Danaus plexippus]
Length = 324
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA- 143
LFV GLP D RE+ LFR + GY + K + G A + FV F A A
Sbjct: 19 LFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTSKNGKTASPVGFVTFHTRAGAEAAK 76
Query: 144 MDALHGYKFDDKKPDSP-TLKIQFA 167
D G +FD PD P T++++FA
Sbjct: 77 QDLQQGVRFD---PDMPQTIRLEFA 98
>gi|149241847|ref|XP_001526367.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450490|gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 868
Score = 43.5 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
K G+SN + + LP + TR+++ LF F + +RV P++ A F+EF+
Sbjct: 739 KSGKSNKIIIKNLPFEATRKDLLELFGAFGSLKSVRV----PKKFDQSARGFAFIEFNLL 794
Query: 138 KCARTAMDALHG 149
K A AM L G
Sbjct: 795 KEAENAMTQLEG 806
>gi|225713086|gb|ACO12389.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 72 NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
NA P + + +LF+ LP + +S LF F G++E+R++ P R + F
Sbjct: 132 NAVHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAF 183
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
VEF++ + A ++L G+K P++ ++KI FA
Sbjct: 184 VEFENEVQSAAARESLQGFKIT---PNA-SMKISFA 215
>gi|195134172|ref|XP_002011511.1| snf [Drosophila mojavensis]
gi|193906634|gb|EDW05501.1| snf [Drosophila mojavensis]
Length = 216
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFTTELQSN 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAKEALQGFKI------TPTHAMKITFA 214
>gi|443690134|gb|ELT92349.1| hypothetical protein CAPTEDRAFT_169706 [Capitella teleta]
Length = 383
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV + D RE+ LF PF +++ VI + TG FV + + A +A
Sbjct: 303 VLFVYNIGPDADERELWQLFSPFGVVQKVNVIRDTAKNTGKG---FGFVSMANYQEAMSA 359
Query: 144 MDALHGYKFDDKKPDSPTLK 163
+ L+GYK+ KP + K
Sbjct: 360 IHNLNGYKYYQNKPLQVSFK 379
>gi|442619713|ref|NP_001262688.1| couch potato, isoform O [Drosophila melanogaster]
gi|440217571|gb|AGB96068.1| couch potato, isoform O [Drosophila melanogaster]
Length = 748
Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 440 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 497
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 498 EAAKQDLQGVRFD---PDMPQTIRLEFA 522
>gi|331218892|ref|XP_003322123.1| hypothetical protein PGTG_03660 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301113|gb|EFP77704.1| hypothetical protein PGTG_03660 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 311
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++GLP + T ++ LF+ + G++ +R++ P RTG + FV++D + A
Sbjct: 237 VLFLEGLPAEVTDDMMAVLFQQYPGFQSVRLV---PGRTG-----IAFVQYDTAAQSDMA 288
Query: 144 MDALHGYKF 152
AL G+K
Sbjct: 289 KAALDGFKL 297
>gi|442619715|ref|NP_001262689.1| couch potato, isoform P [Drosophila melanogaster]
gi|440217572|gb|AGB96069.1| couch potato, isoform P [Drosophila melanogaster]
Length = 841
Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 440 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 497
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 498 EAAKQDLQGVRFD---PDMPQTIRLEFA 522
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 52 PGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
P I PT D++ P N + L+V L T ++ F+P G+R
Sbjct: 579 PVIKPTATDLLVDAPEPEATNTAT---------LYVRNLNFSTTIERLTEAFKPLSGFRS 629
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKK 156
V K + G +M FVEF+ P+ A A+ A+ G+ + K
Sbjct: 630 ATVKTKMDPKRGVLSMGFGFVEFNSPETATAALRAMDGHDLEGHK 674
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
++V LP+D +E+ +F Y EIR I + R + F++FDD + A+ A
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHK---YGEIRNIDIKSRSRD--SPAFAFIQFDDRRDAKEA 59
Query: 144 MDALHGYKFDDKKPDSPTLKIQF 166
+ A GY+FD K+ L+++F
Sbjct: 60 VRARDGYEFDGKR-----LRVEF 77
>gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Length = 225
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF+ A A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFEYDGQAGAA 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA- 143
LFV GLP D RE+ LFR + GY + K + G A + FV F A A
Sbjct: 18 LFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGAEAAK 75
Query: 144 MDALHGYKFDDKKPDSP-TLKIQFA 167
D G +FD PD P T++++FA
Sbjct: 76 QDLQQGVRFD---PDMPQTIRLEFA 97
>gi|426246411|ref|XP_004016988.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Ovis aries]
Length = 225
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P R + FVEF++ A
Sbjct: 152 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAG 203
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 204 RDALQGFKIT----PSHAMKITYA 223
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-----FAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 51 EFEDPRDAEDAIHGRDGYNFDGNR-----LRVELAH 81
>gi|448106273|ref|XP_004200705.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|448109390|ref|XP_004201336.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382127|emb|CCE80964.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382892|emb|CCE80199.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV------LCFVEFDD 136
N L+V LP D T +E+ LF P G+R + K + +CFVEF+D
Sbjct: 359 NTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKNSSSSNSGHSGSHNHGPMCFVEFED 418
Query: 137 PKCARTAMDALHG 149
A A+ L+G
Sbjct: 419 VAHATRALAELYG 431
>gi|225710606|gb|ACO11149.1| U1 small nuclear ribonucleoprotein A [Caligus rogercresseyi]
Length = 217
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 142 NQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSA 193
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A ++L G+K P++ ++KI FA
Sbjct: 194 AARESLQGFKIT---PNA-SMKISFA 215
>gi|442619717|ref|NP_001262690.1| couch potato, isoform Q [Drosophila melanogaster]
gi|440217573|gb|AGB96070.1| couch potato, isoform Q [Drosophila melanogaster]
Length = 762
Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 440 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 497
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 498 EAAKQDLQGVRFD---PDMPQTIRLEFA 522
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKG---ESNLLFVDG-LPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G +S +D LP + T+ E+ LF
Sbjct: 9 PTCNNTANG-PTTVNNNCSSPVDSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIES 67
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ + TG +++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 68 CKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 116
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDPK 138
E++ LFV L T ++ +F+P G+ RV K P+R G+ +M FVEF
Sbjct: 575 ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSA 634
Query: 139 CARTAMDALHGYKFD 153
AR A+ ++GYK D
Sbjct: 635 QARAALATMNGYKLD 649
>gi|225719682|gb|ACO15687.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 72 NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
NA P + + +LF+ LP + +S LF F G++E+R++ P R + F
Sbjct: 132 NAVHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAF 183
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
VEF++ + A ++L G+K P++ ++KI FA
Sbjct: 184 VEFENEVQSAAARESLQGFKIT---PNA-SMKISFA 215
>gi|122919626|pdb|2B0G|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
gi|134103993|pdb|2AYM|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
Length = 83
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 8 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFTTELQSN 59
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 60 AAKEALQGFKI------TPTHAMKITFA 81
>gi|453085210|gb|EMF13253.1| hypothetical protein SEPMUDRAFT_148613 [Mycosphaerella populorum
SO2202]
Length = 568
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF GY+ + R H+ +CFVEF+D A
Sbjct: 375 NTLYVGNLPVDTSEDELKALFSKVRGYKRLCFRTKHQG---------SMCFVEFEDVSFA 425
Query: 141 RTAMDALHG 149
A++ L+G
Sbjct: 426 TKALNELYG 434
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+ V LP + TR+++ LF F + +RV P++ A FVEF PK A AM
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEAENAM 798
Query: 145 DALHG 149
D L G
Sbjct: 799 DQLQG 803
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDPK 138
E++ LFV L T ++ +F+P G+ RV K P+R G+ +M FVEF
Sbjct: 590 ETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSA 649
Query: 139 CARTAMDALHGYKFD 153
AR A+ ++GYK D
Sbjct: 650 QARAALATMNGYKLD 664
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
K+G + + LP + T+++V LF F R +RV P++ A F +F P
Sbjct: 696 KRGTKTKIIIKNLPFEATKKDVRALFGAFGQLRSVRV----PKKMDRAARGFAFADFTTP 751
Query: 138 KCARTAMDAL 147
K A +AM+AL
Sbjct: 752 KEAESAMEAL 761
>gi|302673457|ref|XP_003026415.1| hypothetical protein SCHCODRAFT_35516 [Schizophyllum commune H4-8]
gi|300100097|gb|EFI91512.1| hypothetical protein SCHCODRAFT_35516, partial [Schizophyllum
commune H4-8]
Length = 230
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 34 YSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESN-LLFVDGLPT 92
Y++PL L +R +A D ++ +P++ R N P + N +LF+ LP
Sbjct: 119 YTNPLKQ-KLKAKRLALAS-------DGVSHLPATRRPNVLMPDEYLPPNKILFLQNLPE 170
Query: 93 DCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKF 152
++ +++ LF + E+R++ P + + FVE+ D A A DALH YK
Sbjct: 171 TVSKDQLTALFSQYPNLHEVRMV---PTKKD-----IAFVEYYDEASATNAKDALHNYKM 222
Query: 153 D 153
D
Sbjct: 223 D 223
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L+V LP DCT+REV F F ++++ E +RT + FVEF D + AR A+
Sbjct: 9 LYVGNLPDDCTQREVEEEFEKFG-----KIVYCELKRTVS-GLPFAFVEFSDYRDARDAI 62
Query: 145 DALHGYKFDDKK 156
G +F+ K+
Sbjct: 63 KNKDGAEFNGKR 74
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E+ ++V LP++C +RE+ F F + V + G FVEF+DP+ A
Sbjct: 6 ENGRVYVGNLPSECDQREIEEEFEKFGKIKRCDV------KRGANGSSFAFVEFEDPRDA 59
Query: 141 RTAMDALHGYKF 152
+ A+ GY+F
Sbjct: 60 KDAIKEKDGYEF 71
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 449 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 506
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 507 EAAKQDLQGVRFD---PDMPQTIRLEFA 531
>gi|326479306|gb|EGE03316.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 543
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEF+D A
Sbjct: 340 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFEDVSFATK 392
Query: 143 AMDALHGYKFDDK 155
+ L+GY+ +
Sbjct: 393 CLTELYGYELSNS 405
>gi|840821|emb|CAA44751.1| U2-snRNP-specific b'' [Mus musculus]
Length = 97
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S L F G++E+R++ P R + FVEF++ A A
Sbjct: 24 ILFLNNLPEETNEMMLSMLLNQFPGFKEVRLV---PGRHD-----IAFVEFENDGQAGAA 75
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 76 RDALQGFKIT----PSHAMKITYA 95
>gi|410080362|ref|XP_003957761.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
gi|372464348|emb|CCF58626.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
Length = 680
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 40 DPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESN----LLFVDGLPTDCT 95
+PN +R +++ N I+ SL P + N L+V LP D T
Sbjct: 509 NPNSEKKRPNVSNAANVKNESAISQADLSLLAKIPPPANPADQNPPCNTLYVGNLPPDAT 568
Query: 96 RREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDK 155
+E+ LF G+R + +K G +CFVEFDD + A+ L+G +
Sbjct: 569 EQELRQLFSSQEGFRRLSFKNKSIPGHGHGHGPMCFVEFDDVSFSTRALAKLYGSQLPRS 628
Query: 156 KPDSP-TLKIQFAHFPF 171
+S +++ F+ P
Sbjct: 629 TINSKGGIRLSFSKNPL 645
>gi|302660324|ref|XP_003021842.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
gi|291185760|gb|EFE41224.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
Length = 654
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEF+D A
Sbjct: 427 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFEDVSFATK 479
Query: 143 AMDALHGYKFDDK 155
+ L+GY+ +
Sbjct: 480 CLTELYGYELSNS 492
>gi|302505920|ref|XP_003014917.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
gi|291178488|gb|EFE34277.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
Length = 655
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEF+D A
Sbjct: 428 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFEDVSFATK 480
Query: 143 AMDALHGYKFDDK 155
+ L+GY+ +
Sbjct: 481 CLTELYGYELSNS 493
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 451 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 508
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 509 EAAKQDLQGVRFD---PDMPQTIRLEFA 533
>gi|393233936|gb|EJD41503.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 249
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP T+ ++ LF + E+R+I P + + FVE+ D A
Sbjct: 174 NKILFLQNLPDSVTKDQLVTLFSQYPNLHEVRLI---PTKKD-----IAFVEYVDEGSAT 225
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +ALH YK D + +K+ FA
Sbjct: 226 VAKEALHNYKLDGE----TKIKVTFA 247
>gi|389637036|ref|XP_003716159.1| hypothetical protein MGG_03722 [Magnaporthe oryzae 70-15]
gi|351641978|gb|EHA49840.1| hypothetical protein MGG_03722 [Magnaporthe oryzae 70-15]
gi|440469252|gb|ELQ38369.1| hypothetical protein OOU_Y34scaffold00542g61 [Magnaporthe oryzae
Y34]
gi|440486718|gb|ELQ66557.1| hypothetical protein OOW_P131scaffold00378g26 [Magnaporthe oryzae
P131]
Length = 648
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDR-AMVLCFVEFDDPKCARTA 143
+FV LP D T +V+ LF +++I +RTG F+EFD P A
Sbjct: 369 VFVGNLPRDITEEQVADLFSAIGTVNRVQII----KRTGTTIEQPFAFIEFDRPDTPEAA 424
Query: 144 MDALHGYKFDDKKPDSPTLKIQFAHFPFHLPS 175
+ ALHG+ + + ++ H P +PS
Sbjct: 425 IAALHGFIHEGSRLRVERKVVKDKHSPRRVPS 456
>gi|58262246|ref|XP_568533.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134118674|ref|XP_771840.1| hypothetical protein CNBN0220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254444|gb|EAL17193.1| hypothetical protein CNBN0220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230707|gb|AAW47016.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 285
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LFV LP T ++ +F G EIR I P + + FVEF D A
Sbjct: 209 NSVLFVQNLPDGTTSEDLREVFEVHPGLIEIRTI---PAKKD-----IAFVEFADEGAAT 260
Query: 142 TAMDALHGYKFD 153
A DALH +K D
Sbjct: 261 IAKDALHNFKID 272
>gi|392883960|gb|AFM90812.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 153 ILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEGQAGAA 204
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G++ S +KI +A
Sbjct: 205 RDALQGFRI----TPSHAMKITYA 224
>gi|296816757|ref|XP_002848715.1| RNA binding protein [Arthroderma otae CBS 113480]
gi|238839168|gb|EEQ28830.1| RNA binding protein [Arthroderma otae CBS 113480]
Length = 621
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEF+D A
Sbjct: 399 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFEDVSFATK 451
Query: 143 AMDALHGYKFDDK 155
+ L+GY+ +
Sbjct: 452 CLTELYGYELSNS 464
>gi|198434778|ref|XP_002132163.1| PREDICTED: similar to GH24608 isoform 1 [Ciona intestinalis]
Length = 216
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF++ LP + ++ LF F G++E+R++ P R + FVEF+ + A
Sbjct: 141 NHILFLNNLPPETQEEMLNMLFNRFNGFKEVRLV---PGRHD-----IAFVEFEGEQQAS 192
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A AL G+K S +K+ FA
Sbjct: 193 EAKGALQGFKIS----PSNAMKVTFA 214
>gi|451850380|gb|EMD63682.1| hypothetical protein COCSADRAFT_27011 [Cochliobolus sativus ND90Pr]
Length = 936
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 752 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 802
Query: 141 RTAMDALHGYKFDDK 155
A++ L+GY +
Sbjct: 803 TKALNELYGYMLHNS 817
>gi|384501069|gb|EIE91560.1| hypothetical protein RO3G_16271 [Rhizopus delemar RA 99-880]
Length = 314
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N ++V LP+ + E+ LF GYR + K P +CFVEF+D CA
Sbjct: 219 NTIYVGNLPSTTSEDELRALFSNCKGYRRMCFRTKGP---------MCFVEFEDILCASQ 269
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPFHL 173
A+ L GY + +++ F+ P ++
Sbjct: 270 AIKDLQGYTLSNSAKSG--VRLSFSKNPLYI 298
>gi|387914214|gb|AFK10716.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392878676|gb|AFM88170.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884228|gb|AFM90946.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884422|gb|AFM91043.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884424|gb|AFM91044.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ LP + +S LF F G++E+R++ P R + FVEF++ A A
Sbjct: 153 ILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEGQAGAA 204
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G++ S +KI +A
Sbjct: 205 RDALQGFRI----TPSHAMKITYA 224
>gi|358340304|dbj|GAA48227.1| U1 small nuclear ribonucleoprotein A [Clonorchis sinensis]
Length = 314
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP D +S LF F GYRE+R++ P R + FVEF + A
Sbjct: 239 NKILFLTNLPEDSDEAMLSMLFNQFSGYREVRMV---PGRHD-----IAFVEFGNEIEAG 290
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A L G+ +P ++I FA
Sbjct: 291 AAKHGLQGFNIRPGRP----IRITFA 312
>gi|432892495|ref|XP_004075809.1| PREDICTED: TATA-binding protein-associated factor 2N-like [Oryzias
latipes]
Length = 446
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEP-------RRT 122
R+++G ++N +FV GL D T +EV F+ +G ++ +P + T
Sbjct: 218 RDDSGGEQDNSDNNTIFVQGLGEDATVQEVGDYFKQ-IGIIKVNKKTGQPMINIYSDKAT 276
Query: 123 GDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
G R V FDDP A+ A+D G +F+ K +K+ FA
Sbjct: 277 G-RPKGEATVSFDDPPSAKAAIDWFDGKEFNGK-----PIKVSFA 315
>gi|327293680|ref|XP_003231536.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326466164|gb|EGD91617.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 556
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D + E+ LF GY+ + + ++P +CFVEF+D A
Sbjct: 329 NTLYVGNLPPDTSEDELKALFSRQRGYKRM-IFRQKPNGP------ICFVEFEDVSFATK 381
Query: 143 AMDALHGYKFDDK 155
+ L+GY+ +
Sbjct: 382 CLTELYGYELSNS 394
>gi|283779286|ref|YP_003370041.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
gi|283437739|gb|ADB16181.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
Length = 100
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L+V L D + + LF F R +VI + R TG R+ FVE D AR+A+
Sbjct: 5 LYVGNLSYDVNNQSLEELFSQFGAVRSAQVI--QDRETG-RSKGFGFVEMQDDNAARSAI 61
Query: 145 DALH 148
ALH
Sbjct: 62 QALH 65
>gi|149263421|ref|XP_995150.2| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVI---HKEPRRTGDRAMVLCFVEFDDPK 138
+++LF+ LP + +S LF F G++E ++ H + FVEFD+
Sbjct: 209 NHILFLTNLPEETNELMLSMLFTQFPGFKEAHLVPGCHD-----------IAFVEFDNEV 257
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQF 166
A A+DAL G+K +KI F
Sbjct: 258 QAGAALDALQGFKITQNN----AMKISF 281
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-----FAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 51 EFEDPRDAEDAIQGRDGYNFDGNR-----LRVELAH 81
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 42.7 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 57 TIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIH 116
+ P V + ++ S + KG N + + +P + +R+E+S L F + +R+
Sbjct: 722 SAPSVSDAASATSHKVTKSLMPKGPKNKILIRNVPFEASRKELSQLLSTFGKIKNLRLPK 781
Query: 117 KEPRRTGDRAMVLCFVEFDDPKCARTAMDAL 147
K+ R CFVE+ + AR+A ++L
Sbjct: 782 KQNEPNSHRG--FCFVEYSTTEDARSAFESL 810
>gi|194763797|ref|XP_001964019.1| GF20948 [Drosophila ananassae]
gi|190618944|gb|EDV34468.1| GF20948 [Drosophila ananassae]
Length = 857
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E+N +FV L CT+ E+ LF PF +++R++HK ++ + +VEF+ P A
Sbjct: 682 ETNKIFVRNLYPACTKEELQELFSPFGNIKDVRLVHKLNKQLKG----IAYVEFELPAEA 737
Query: 141 RTAMDALHG 149
+ A+ G
Sbjct: 738 QKAVAGRDG 746
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 440 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 497
Query: 141 RTAMDALHGYKFDDKKPDSP-TLKIQFA 167
A L G +FD PD P T++++FA
Sbjct: 498 EAAKQDLQGVRFD---PDMPQTIRLEFA 522
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+ V LP + TR++V LF F + +RV P++ A FVEF PK A AM
Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEAENAM 809
Query: 145 DALHG 149
D L G
Sbjct: 810 DQLQG 814
>gi|326505342|dbj|BAK03058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ +SN+LF+ L CT ++++ LF F E++++ + + R++ FV+F DP
Sbjct: 8 QNQSNVLFIGDLSIFCTEKDLNDLFSGFGTVTEVKIMKSDDK---GRSLSYGFVKFSDPA 64
Query: 139 CARTAMDALH 148
A AM+ L
Sbjct: 65 DAARAMNHLQ 74
>gi|198434776|ref|XP_002132167.1| PREDICTED: similar to GH24608 isoform 2 [Ciona intestinalis]
Length = 220
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF++ LP + ++ LF F G++E+R++ P R + FVEF+ + A
Sbjct: 145 NHILFLNNLPPETQEEMLNMLFNRFNGFKEVRLV---PGRHD-----IAFVEFEGEQQAS 196
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A AL G+K S +K+ FA
Sbjct: 197 EAKGALQGFKIS----PSNAMKVTFA 218
>gi|125983292|ref|XP_001355411.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|195162057|ref|XP_002021872.1| GL14287 [Drosophila persimilis]
gi|54643726|gb|EAL32469.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|194103770|gb|EDW25813.1| GL14287 [Drosophila persimilis]
Length = 216
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFTTELQSN 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAKEALQGFKI------TPTHAMKITFA 214
>gi|442760027|gb|JAA72172.1| Putative spliceosomal protein snrnp-u1a/u2b [Ixodes ricinus]
Length = 239
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 162 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEIQSS 213
Query: 142 TAMDALHGYK 151
A +AL G+K
Sbjct: 214 AAKEALQGFK 223
>gi|224084380|ref|XP_002307278.1| predicted protein [Populus trichocarpa]
gi|222856727|gb|EEE94274.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV GLP D E+ LFR F GY + R + F F D A A
Sbjct: 12 ILFVAGLPDDIKPSEIYSLFREFPGYESSHL-----RSPSQNSQPFAFATFADQPSAVAA 66
Query: 144 MDALHGYKFDDKK 156
M AL+G FD ++
Sbjct: 67 MHALNGMVFDLER 79
>gi|391337372|ref|XP_003743043.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Metaseiulus occidentalis]
Length = 212
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ GLP + + LF F G++E+R+I P + FVE++D + A
Sbjct: 139 ILFLTGLPEETNDMMLQMLFGQFPGFKEVRLIPGRPD--------IAFVEYEDEAQSTAA 190
Query: 144 MDALHGYKFDDKKPDSPTLKIQFAH 168
+ L G+K P +P ++I FA
Sbjct: 191 KNGLQGFKVT---PTAP-IRITFAK 211
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----FAFV 116
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 117 EFEDPRDAEDAIRGRDGYNFDGNR-----LRVELAH 147
>gi|359358253|gb|AEV40671.1| SNF [Antheraea pernyi]
Length = 228
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + + +S LF F G++E+R++ P R + FVEF + +
Sbjct: 153 NQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFGNEMQSA 204
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 205 AAKEALQGFKI------TPTHAMKITFA 226
>gi|429864037|gb|ELA38421.1| u1 small nuclear [Colletotrichum gloeosporioides Nara gc5]
Length = 247
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D V+ +F F G+RE+R++ P R G + FVE+D + A
Sbjct: 172 NKILFVQNLPDDYDIEAVTSIFGRFEGFREVRLV---PGRRG-----IAFVEYDGEQGAI 223
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQF 166
TA + G DS T+K+ +
Sbjct: 224 TAKENTAGMVLG----DSHTIKVTY 244
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 42.7 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+ V LP + TR+++ LF F + +RV P++ A FVEF PK A AM
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVRV----PKKFDKSARGFAFVEFLLPKEAENAM 785
Query: 145 DALHG 149
D L G
Sbjct: 786 DQLQG 790
>gi|261329508|emb|CBH12490.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 340
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L V+ +PT T ++ LFRPF +R+I R G+ FV + + A AM
Sbjct: 10 LIVNYIPTPVTEEDLEELFRPFGPLVSVRIICD--RENGNHPKGYGFVRYKFVESAMNAM 67
Query: 145 DALHGYKFDDKK 156
++GY ++K+
Sbjct: 68 SRMNGYSINNKR 79
>gi|390360288|ref|XP_003729672.1| PREDICTED: ELAV-like protein 2-like [Strongylocentrotus purpuratus]
Length = 385
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 72 NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
N + G+ +FV LP DC + LF P+ ++V+ +P + R F
Sbjct: 291 NLQAMTNNGQGWCIFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQ---RCKGYGF 347
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQF 166
V + A +A++ L+GY+ + K+ TL++ F
Sbjct: 348 VNMLNYDEALSAINTLNGYQLNGKR----TLQVSF 378
>gi|388516627|gb|AFK46375.1| unknown [Medicago truncatula]
Length = 314
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + EV LF G++++++I +E R T +CF+EF+D A
Sbjct: 210 NTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQE-RHT------VCFIEFEDVNSATN 262
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDG 177
L G S ++IQ++ PF DG
Sbjct: 263 VHHNLQGAVIPSS--GSIGMRIQYSKNPFGKREDG 295
>gi|242207485|ref|XP_002469596.1| predicted protein [Postia placenta Mad-698-R]
gi|220731400|gb|EED85245.1| predicted protein [Postia placenta Mad-698-R]
Length = 231
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 64 GVPSSLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRT 122
VP S R N P + N +LF+ LP ++ ++ LF + E+R+I P +
Sbjct: 137 AVPVSKRPNVQMPDEYLPPNKILFLQNLPDSVSKDQLMALFSQYPNLYEVRLI---PTKK 193
Query: 123 GDRAMVLCFVEFDDPKCARTAMDALHGYKFD 153
+ FVE+ D A A DALH YK D
Sbjct: 194 D-----IAFVEYMDEGSATVAKDALHNYKLD 219
>gi|72391404|ref|XP_845996.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175909|gb|AAX70033.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70802532|gb|AAZ12437.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 340
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L V+ +PT T ++ LFRPF +R+I R G+ FV + + A AM
Sbjct: 10 LIVNYIPTPVTEEDLEELFRPFGPLVSVRIICD--RENGNHPKGYGFVRYKFVESAMNAM 67
Query: 145 DALHGYKFDDKK 156
++GY ++K+
Sbjct: 68 SRMNGYSINNKR 79
>gi|405123760|gb|AFR98523.1| RNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 284
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LFV LP T ++ +F G EIR I P + + FVEF D A
Sbjct: 209 NSVLFVQNLPDGTTSEDLREVFEVHPGLIEIRTI---PAKKD-----IAFVEFADEGAAT 260
Query: 142 TAMDALHGYKFD 153
A DALH +K D
Sbjct: 261 IAKDALHNFKID 272
>gi|321265410|ref|XP_003197421.1| RNA binding protein [Cryptococcus gattii WM276]
gi|317463901|gb|ADV25634.1| RNA binding protein, putative [Cryptococcus gattii WM276]
Length = 286
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LFV LP T ++ +F G EIR I P + + FVEF D A
Sbjct: 209 NSVLFVQNLPDGTTSEDLREVFEVHPGLIEIRTI---PAKKD-----IAFVEFADEGAAT 260
Query: 142 TAMDALHGYKFD 153
A DALH +K D
Sbjct: 261 VAKDALHNFKID 272
>gi|405974726|gb|EKC39350.1| U1 small nuclear ribonucleoprotein A [Crassostrea gigas]
Length = 541
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 466 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGRHD-----IAFVEFENEVQSG 517
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G+K S +KI +A
Sbjct: 518 AAKDALQGFKI----TPSNAMKISYA 539
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----FAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 51 EFEDPRDAEDAIRGRDGYNFDGNR-----LRVELAH 81
>gi|440355222|gb|AGC00413.1| SNF [Antheraea pernyi]
Length = 222
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF + +
Sbjct: 147 NQILFLTNLPDGTSEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFGNEMQSA 198
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 199 AAKEALQGFKI------TPTHAMKITFA 220
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 42.4 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 52 PGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PG + D++ +P N + L+V L + + F+P G+R
Sbjct: 582 PGTKLSATDLLVDIPEPEATNTAT---------LYVRNLNFSTSTERLIEAFKPLSGFRS 632
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+V K + G +M FVEF+ P+ A A+ A+ GY + K L+I+ +H
Sbjct: 633 AKVKTKVDPKRGVLSMGFGFVEFNSPETATAALRAMDGYDLEGHK-----LQIKASH 684
>gi|340519782|gb|EGR50020.1| predicted protein [Trichoderma reesei QM6a]
Length = 660
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D E+ LF GY+ + R+ H P +CFVE++D A
Sbjct: 445 NTLYVGNLPMDACEDELKVLFSLTKGYKRMCFRIKHNGP---------MCFVEYEDIAHA 495
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 496 TKALTTLYGFPLHNS 510
>gi|167517167|ref|XP_001742924.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778023|gb|EDQ91638.1| predicted protein [Monosiga brevicollis MX1]
Length = 231
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
++V G+P D +E++ FRPF ++ + + ++ CFVE+D P+ A A+
Sbjct: 21 VYVGGIPFDAGEQEIAEAFRPFGAIQQCAFTYDQAL---NKHKGFCFVEYDAPEAALLAL 77
Query: 145 DALHGYKFDDKKPDSPTLKI 164
+ + Y + TLKI
Sbjct: 78 EQMTSYNIKGR-----TLKI 92
>gi|432953888|ref|XP_004085464.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Oryzias latipes]
Length = 218
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF++ LP + +S LF F G++E+R++ P + + FVEF+ A
Sbjct: 143 NHILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----IAFVEFESDTQAG 194
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G++ + +KI FA
Sbjct: 195 VAKDALQGFRIT----ATCAMKITFA 216
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 42.4 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G K ++N + + LP + TR++V LF F + +RV P++ A FVE
Sbjct: 743 GGASKTNKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRV----PKKFDKSARGFAFVE 798
Query: 134 FDDPKCARTAMDALHG 149
F K A AMD L G
Sbjct: 799 FVLLKEAENAMDQLEG 814
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 42.4 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G K ++N + + LP + TR++V LF F + +RV P++ A FVE
Sbjct: 743 GGASKTNKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRV----PKKFDKSARGFAFVE 798
Query: 134 FDDPKCARTAMDALHG 149
F K A AMD L G
Sbjct: 799 FVLLKEAENAMDQLEG 814
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 42.4 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 73 AGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
G P+K+ + L+V +P+ T + LFRPF RV+ R MV
Sbjct: 592 GGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFG-----RVVQARMFRFQRYGMV---- 642
Query: 133 EFDDPKCARTAMDALHGYK 151
FD+P CA A+D L GY+
Sbjct: 643 RFDNPSCAAAAIDHLDGYQ 661
>gi|432953883|ref|XP_004085463.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Oryzias latipes]
Length = 217
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF++ LP + +S LF F G++E+R++ P + + FVEF+ A
Sbjct: 142 NHILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----IAFVEFESDTQAG 193
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A DAL G++ + +KI FA
Sbjct: 194 VAKDALQGFRI----TATCAMKITFA 215
>gi|452838817|gb|EME40757.1| hypothetical protein DOTSEDRAFT_27368 [Dothistroma septosporum
NZE10]
Length = 234
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +L + LP D + ++ +F+ F G++E+RV+ P R G L F E++D +
Sbjct: 160 NKILLLRELPEDYGKEALTAVFQRFPGFKEVRVV---PGRKG-----LAFAEYEDETGST 211
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQF 166
A +A++G +K T+K+ F
Sbjct: 212 AAREAMNGVTLGEK-----TIKVTF 231
>gi|296005347|ref|XP_002809001.1| U1 small nuclear ribonucleoprotein a, putative [Plasmodium
falciparum 3D7]
gi|225631938|emb|CAX64282.1| U1 small nuclear ribonucleoprotein a, putative [Plasmodium
falciparum 3D7]
Length = 449
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV+ + + + + LF+ + G+ E R+I P+R + FV+F D A A
Sbjct: 378 ILFVENVVENVDTQAFNDLFKNYAGFVEARII---PQRN------VAFVDFTDETTATFA 428
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
M A+ Y+ K LKI +A
Sbjct: 429 MKAVQNYELQGSK-----LKISYA 447
>gi|146093107|ref|XP_001466665.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|134071028|emb|CAM69708.1| putative RNA binding protein [Leishmania infantum JPCM5]
Length = 663
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 70 RNNAGSPLKKGESNL--LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
R + G P+ + + LFV +P DCT+ ++ LF + R++ +HK+ D AM
Sbjct: 220 RRSEGGPVGEARKKIMKLFVRNIPLDCTKMDLEELFGAYGSVRQV-TLHKDTSPVQDEAM 278
Query: 128 V--LCFVEFDDPKCARTAMDALHGYK 151
V + FV + + A A +H K
Sbjct: 279 VRLIAFVIYTEEGAAERAAREVHNTK 304
>gi|391330723|ref|XP_003739804.1| PREDICTED: CUGBP Elav-like family member 3-like [Metaseiulus
occidentalis]
Length = 484
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ LP + E++H+F PF +V R +++ FV FD+ A++A+
Sbjct: 401 LFIYHLPQEFGDAELTHMFLPFGNVISAKVFID---RATNQSKCFGFVSFDNQNSAQSAI 457
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 458 QAMNGFQIGMKR-----LKVQL 474
>gi|428171290|gb|EKX40208.1| hypothetical protein GUITHDRAFT_75811, partial [Guillardia theta
CCMP2712]
Length = 209
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP D T +V+ +F PF G++E+R++ P R G + FVE++ + A
Sbjct: 151 ILFLENLPLDITSDDVAAVFSPFPGFKEVRLV---PSRPG-----IAFVEYESDVQSGMA 202
Query: 144 MDALH 148
M L
Sbjct: 203 MARLQ 207
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G P+K+ + L+V +P+ T + LFRPF RV+ R MV
Sbjct: 677 GKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFG-----RVVQARMFRFQRYGMV----R 727
Query: 134 FDDPKCARTAMDALHGYKF 152
FD+P CA A+D L GY+
Sbjct: 728 FDNPSCAAAAIDHLDGYQI 746
>gi|157131009|ref|XP_001655775.1| hypothetical protein AaeL_AAEL011963 [Aedes aegypti]
gi|108871684|gb|EAT35909.1| AAEL011963-PA [Aedes aegypti]
Length = 891
Score = 42.4 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 68 SLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
S R N +K E N LFV GLP + T +V LF P+ +++RV++ R+G ++
Sbjct: 718 SSRQNKFKYSEKFEPNKLFVKGLPFEATNDDVRKLFEPYGKLKDVRVVY---YRSG-KSK 773
Query: 128 VLCFVEFDDPKCARTAM 144
L +VE++ A+ A+
Sbjct: 774 GLAYVEYESEVAAKNAV 790
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G P+K+ + L+V +P+ T + LFRPF RV+ R MV
Sbjct: 680 GKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFG-----RVVQARMFRFQRYGMV----R 730
Query: 134 FDDPKCARTAMDALHGYKF 152
FD+P CA A+D L GY+
Sbjct: 731 FDNPSCAAAAIDHLDGYQI 749
>gi|255710361|gb|ACU31000.1| U1 small nuclear ribonucleoprotein A [Ochlerotatus triseriatus]
Length = 202
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 127 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFATELQSG 178
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 179 AAREALQGFKI------TPTHAMKISFA 200
>gi|398018803|ref|XP_003862566.1| RNA binding protein, putative [Leishmania donovani]
gi|322500796|emb|CBZ35873.1| RNA binding protein, putative [Leishmania donovani]
Length = 663
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 70 RNNAGSPLKKGESNL--LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
R + G P+ + + LFV +P DCT+ ++ LF + R++ +HK+ D AM
Sbjct: 220 RRSEGGPVGEARKKIMKLFVRNIPLDCTKMDLEELFGAYGSVRQV-TLHKDTSPVQDEAM 278
Query: 128 V--LCFVEFDDPKCARTAMDALHGYK 151
V + FV + + A A +H K
Sbjct: 279 VRLIAFVIYTEEGAAERAAREVHNTK 304
>gi|313238053|emb|CBY13172.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
++V+ LP + ++ LF F G+++ R P G +A FVEF DP A +A
Sbjct: 132 IYVENLPDEANESMLNLLFSQFPGFKKSR-----PIPAGGKA----FVEFADPGAATSAK 182
Query: 145 DALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K PD P +K+ +A
Sbjct: 183 DALQGFKVT---PDRP-IKLTYA 201
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G P+K+ + L+V +P+ T + LFRPF RV+ R MV
Sbjct: 670 GKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFG-----RVVQARMFRFQRYGMV----R 720
Query: 134 FDDPKCARTAMDALHGYKF 152
FD+P CA A+D L GY+
Sbjct: 721 FDNPSCAAAAIDHLDGYQI 739
>gi|290562822|gb|ADD38806.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 142 NQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFENEVQSA 193
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A +L G+K P++ ++KI FA
Sbjct: 194 AARGSLQGFKIT---PNA-SMKISFA 215
>gi|156088273|ref|XP_001611543.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798797|gb|EDO07975.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 285
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 68 SLRNNAGSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA 126
S R + + + +G N LFV+GLP + +V+ +F VG++E RVI A
Sbjct: 197 SSRYASTASMARGLPNRTLFVEGLPEGVSLADVNAVFARSVGFQEARVIA---------A 247
Query: 127 MVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ F++FD+ A AM AL + D TL+I +A
Sbjct: 248 RKVAFIDFDNEFNAGCAMQALQEHPMGDS-----TLRISYA 283
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 19/90 (21%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD--------------- 124
G N LFV GLP D RE+ +LFR G+ ++ + GD
Sbjct: 34 GAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYT---GRGDQVCKNLQFLFFFIPI 90
Query: 125 -RAMVLCFVEFDDPKCARTAMDALHGYKFD 153
R V+ F F + A AM+ L+G KFD
Sbjct: 91 FRKAVVAFATFTSHRFALAAMNELNGVKFD 120
>gi|328352765|emb|CCA39163.1| Protein WHI4 [Komagataella pastoris CBS 7435]
Length = 496
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV--LCFVEFDDPKCA 140
N L+V LP D T E+ LF P G+R + +K +CFVEF+ A
Sbjct: 382 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 441
Query: 141 RTAMDALHG 149
A+ L+G
Sbjct: 442 AEALANLYG 450
>gi|254572223|ref|XP_002493221.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
gi|238033019|emb|CAY71042.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
Length = 497
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV--LCFVEFDDPKCA 140
N L+V LP D T E+ LF P G+R + +K +CFVEF+ A
Sbjct: 383 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 442
Query: 141 RTAMDALHG 149
A+ L+G
Sbjct: 443 AEALANLYG 451
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G P+K+ + L+V +P+ T + LFRPF RV+ R MV
Sbjct: 582 GKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFG-----RVVQARMFRFQRYGMV----R 632
Query: 134 FDDPKCARTAMDALHGYKF 152
FD+P CA A+D L GY+
Sbjct: 633 FDNPSCAAAAIDHLDGYQI 651
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GL D T + ++ F + + VI R TG R FV++D+P+ A+ AM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIM--DRETG-RPRGFGFVKYDNPEDAKDAM 63
Query: 145 DALHGYKFD 153
DA++G D
Sbjct: 64 DAMNGQSLD 72
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 24 MSRRNSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----YAFV 73
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A+ A+ +GY FD + L+++ AH
Sbjct: 74 EFEDPRDAQDAIYGRNGYDFDGHR-----LRVELAH 104
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GL D T + ++ F + + VI R TG R FV++D+P+ A+ AM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIM--DRETG-RPRGFGFVKYDNPEDAKDAM 63
Query: 145 DALHGYKFD 153
DA++G D
Sbjct: 64 DAMNGQSLD 72
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D E+ +F GY+ + +K G +CFVEF+D A
Sbjct: 380 NTLYVGNLPPDANEEELKSMFSKCAGYKRLSFRNKS---NGP----MCFVEFEDAIFAAQ 432
Query: 143 AMDALHG 149
A+ LHG
Sbjct: 433 ALQDLHG 439
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 67 SSLRNNAGSPL---KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
S L N G L K + + +FV G P D RE ++F G+ E + + G
Sbjct: 19 SGLMNGDGEQLISPTKEDISTIFVVGFPEDMQEREFQNMFMFSSGF-EAATLKVPSSKDG 77
Query: 124 DRAM---------VLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFH 172
+ M ++ F +F K A A D L+G K D +K + TLK + A H
Sbjct: 78 EEDMTSTSNIKKQIIGFAKFRTRKEAIEAKDTLNGRKIDAEKGN--TLKAEMAKKNLH 133
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 27/117 (23%)
Query: 56 PTIPDVINGVPSSLRNNAGSPLKKGES----NLLFVDGLPTDCTRREVSHLFRPFVGYRE 111
PT + NG P+++ NN SP+ G + L V+ LP + T+ E+ LF
Sbjct: 16 PTCNNTANG-PTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSI----- 69
Query: 112 IRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+++ FV + DPK A A++ L+G + K T+K+ +A
Sbjct: 70 ------------GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK-----TIKVSYAR 109
>gi|84998042|ref|XP_953742.1| nucleolar phosphoprotein (Nopp34 ) [Theileria annulata]
gi|65304739|emb|CAI73064.1| nucleolar phosphoprotein (Nopp34 homologue), putative [Theileria
annulata]
Length = 195
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
KK E+N+++V LP + ++ F F +IR++ K + G R FV+F+D
Sbjct: 8 KKNENNVIYVGNLPKQLSEEQLKTYFNQFGDVIKIRLM-KSKKTNGSRGY--AFVQFEDH 64
Query: 138 KCARTAMDALHGYKFDDK 155
+ A+ A + + Y D K
Sbjct: 65 EIAKIAAETMDKYIIDGK 82
>gi|156847787|ref|XP_001646777.1| hypothetical protein Kpol_1023p90 [Vanderwaltozyma polyspora DSM
70294]
gi|156117457|gb|EDO18919.1| hypothetical protein Kpol_1023p90 [Vanderwaltozyma polyspora DSM
70294]
Length = 415
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF+D + A A+
Sbjct: 119 LFVRPFPLDVQESELNEIFAPFGSMKEVKILNG-----------FAFVEFEDSESAAKAI 167
Query: 145 DALHGYKFDDK 155
+ ++G F D+
Sbjct: 168 EEVNGKTFADQ 178
>gi|443713681|gb|ELU06415.1| hypothetical protein CAPTEDRAFT_112394, partial [Capitella teleta]
Length = 347
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA- 143
LFV GLP D RE+ LFR + GY + K + G + FV F A A
Sbjct: 5 LFVSGLPMDAKPRELYLLFRAYKGYEG--SLLKVTGKNGKTTSPVGFVTFTSRVAAEAAK 62
Query: 144 MDALHGYKFDDKKPDSP-TLKIQFA 167
D G +FD PD P TL+++FA
Sbjct: 63 QDLQQGVRFD---PDLPQTLRLEFA 84
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 16 VHPEPGMVGITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGS 75
VHP M G A A +S +P P++ +P + + + + + A +
Sbjct: 162 VHPALAMSGHHAAA----MNSAVPHPHMAA-----SPVLGSPVGGATSTSTLTSPSLATA 212
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
+ LFV L C+ +E+ LF+ G+ +R+ +K + FVE+
Sbjct: 213 TSTHAPCSTLFVANLGPFCSEQELKDLFQSISGFLRLRMHNKG-------GSPVAFVEYQ 265
Query: 136 DPKCARTAMDALHG 149
D +CA AM L G
Sbjct: 266 DVRCAMEAMLKLQG 279
>gi|328869164|gb|EGG17542.1| U2 small nuclear ribonucleoprotein B [Dictyostelium fasciculatum]
Length = 241
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LFV+ LP +C + LF F G++ + + R G + FVE+DD + A
Sbjct: 168 ILFVENLPDNCQEMMIQMLFSQFPGFQSVNMT---TARKG-----VAFVEYDDDIKSGLA 219
Query: 144 MDALHGYKFDDKKP 157
M L G+K +P
Sbjct: 220 MSHLQGFKVTSDRP 233
>gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + EV LF G+++++++ +E R T +CF+EF+D A
Sbjct: 180 NTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQE-RHT------VCFIEFEDVNSATN 232
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGD 178
L G S ++IQ++ PF DG+
Sbjct: 233 VHHNLQGAVIPSS--GSVGMRIQYSKNPFGKRKDGN 266
>gi|260943586|ref|XP_002616091.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
gi|238849740|gb|EEQ39204.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
Length = 589
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV------LCFVEFDD 136
N L+V LP D T E+ LF P G+R + K + +CFVEF+D
Sbjct: 458 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSSSGSGSSGHNHGPMCFVEFED 517
Query: 137 PKCARTAMDALHG 149
A A+ L+G
Sbjct: 518 VAHATIALAELYG 530
>gi|312372120|gb|EFR20150.1| hypothetical protein AND_20571 [Anopheles darlingi]
Length = 216
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFASEVQSG 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAREALQGFKI------TPTHAMKISFA 214
>gi|340368063|ref|XP_003382572.1| PREDICTED: hypothetical protein LOC100640859 [Amphimedon
queenslandica]
Length = 790
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + T + LF F G +EIR++ P RT + FVE+++ A
Sbjct: 715 NKILFISNLPPETTEVMLKMLFEQFPGLQEIRLV---PSRTD-----IAFVEYENESQAT 766
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAH 168
AM +L +K P +KI +A+
Sbjct: 767 EAMSSLQDFKIVPTHP----MKITYAN 789
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D +RE+ LFR GY E ++ + G A + FV F + A AM
Sbjct: 41 LFVSGLPMDAKQRELYLLFRSCRGY-ENSLLRITQSKDGGIASPVGFVTFSSAEDADIAM 99
Query: 145 DALHGYKFD 153
L FD
Sbjct: 100 KTLQSVLFD 108
>gi|238879649|gb|EEQ43287.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 915
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
++ LLFV+ P+ ++ V +F +IR P +T + C+V+ + A
Sbjct: 616 QNALLFVNNYPSTFSQATVKEMFEKIGPVAKIRF----PNQTSKKIKRFCYVQMISNEDA 671
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA-HFPFHLPSDGDEKCTP 183
+ +D HG K+DD P L +F+ F P + E+ +P
Sbjct: 672 QKIIDQYHGQKYDD-----PNLGGEFSWEIKFSNPEEKHERSSP 710
>gi|223649102|gb|ACN11309.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 146 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----ISFVEFESEGQAGVA 197
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 198 KDALQGFR 205
>gi|226443332|ref|NP_001139849.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
gi|221219334|gb|ACM08328.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 146 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----ISFVEFESEGQAGVA 197
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 198 KDALQGFR 205
>gi|68475216|ref|XP_718326.1| hypothetical protein CaO19.10095 [Candida albicans SC5314]
gi|68475415|ref|XP_718230.1| hypothetical protein CaO19.2563 [Candida albicans SC5314]
gi|46439988|gb|EAK99299.1| hypothetical protein CaO19.2563 [Candida albicans SC5314]
gi|46440088|gb|EAK99398.1| hypothetical protein CaO19.10095 [Candida albicans SC5314]
Length = 915
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
++ LLFV+ P+ ++ V +F +IR P +T + C+V+ + A
Sbjct: 616 QNALLFVNNYPSTFSQATVKEMFEKIGPVAKIRF----PNQTSKKIKRFCYVQMISNEDA 671
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFA-HFPFHLPSDGDEKCTP 183
+ +D HG K+DD P L +F+ F P + E+ +P
Sbjct: 672 QKIIDQYHGQKYDD-----PNLGGEFSWEIKFSNPEEKHERSSP 710
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 12/105 (11%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G L++ G P D RE+ +LFRP+ GY + + + + FV F +
Sbjct: 20 GTMRTLWLSGFPLDVKHREIHNLFRPYRGYEDSIL----------KPNGVAFVTFTSHEA 69
Query: 140 ARTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKCTPR 184
A A + G FD D LK++FA + +E +P
Sbjct: 70 AVAAKSDITGLHFDPDGTD--VLKVEFAKQNSKRRREAEESASPE 112
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----FAFV 116
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 117 EFEDPRDAEDAIRGRDGYNFDGNR-----LRVELAH 147
>gi|156837691|ref|XP_001642865.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113441|gb|EDO15007.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 600
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T +E+ LF G+R + +K G M CFVEF+D A
Sbjct: 459 NTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGPM--CFVEFEDASFATV 516
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 517 ALAELYG 523
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D +RE+ LFR GY E ++ + G A + FV F + A AM
Sbjct: 41 LFVSGLPMDAKQRELYLLFRSCRGY-ENSLLRITQSKDGGIASPVGFVTFSSAEDADIAM 99
Query: 145 DALHGYKFD 153
L FD
Sbjct: 100 KTLQSVLFD 108
>gi|58394659|ref|XP_320869.2| AGAP011637-PA [Anopheles gambiae str. PEST]
gi|55235062|gb|EAA00418.2| AGAP011637-PA [Anopheles gambiae str. PEST]
Length = 216
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFATELQSG 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAREALQGFKI------TPTHAMKISFA 214
>gi|154303210|ref|XP_001552013.1| hypothetical protein BC1G_09625 [Botryotinia fuckeliana B05.10]
Length = 266
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 70 NTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 120
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 121 TKALHELYGHPLHNS 135
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S + V LP + +R +V LF F + +RV P++ A FVEF+ K A
Sbjct: 13 STKIIVKNLPFEASRDDVFQLFSSFAHLKSVRV----PKKFDRSARGFAFVEFNTVKEAE 68
Query: 142 TAMDALHG 149
T MD L G
Sbjct: 69 TVMDQLQG 76
>gi|170070159|ref|XP_001869484.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
gi|167866053|gb|EDS29436.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
Length = 216
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFATELQSG 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAREALQGFKI------TPTHAMKISFA 214
>gi|347839385|emb|CCD53957.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 349 NTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGP---------MCFVEFEDTSFA 399
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 400 TKALHELYGHPLHNS 414
>gi|269868220|gb|ACZ52416.1| Bruno-3 transcript variant 4, partial [Drosophila pseudoobscura]
Length = 396
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ LP + E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 324 LFIYHLPQEFGDAELMQMFLPFGNVISSKVFID---RATNQSKCFGFVSFDNPASAQAAI 380
Query: 145 DALHGYKFDDKKP 157
A++G++ K+P
Sbjct: 381 QAMNGFQIGMKRP 393
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
+ +S + V LP + R++V LF F + +RV P++ A FVEF PK
Sbjct: 736 RKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRV----PKKFDKSARGFAFVEFLLPK 791
Query: 139 CARTAMDALHG 149
A AMD L G
Sbjct: 792 EAENAMDQLQG 802
>gi|371874989|ref|NP_001243119.1| U2 small nuclear ribonucleoprotein B'' [Danio rerio]
Length = 220
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 147 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----ISFVEFESEAQAGVA 198
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 199 KDALQGFR 206
>gi|294658856|ref|XP_461195.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
gi|202953439|emb|CAG89583.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
Length = 529
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV------LCFVEFDD 136
N L+V LP D T E+ LF P G+R + K + +CFVEF+D
Sbjct: 393 NTLYVGNLPPDATESELRALFSPQKGFRRLSFRTKNQSSSNPNQSSNHNHGPMCFVEFED 452
Query: 137 PKCARTAMDALHG 149
A A+ L+G
Sbjct: 453 VAHATRALAELYG 465
>gi|150865889|ref|XP_001385283.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
gi|149387145|gb|ABN67254.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 732
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV--------LCFVEF 134
N L+V LP D T E+ LF P G+R + K + +CFVEF
Sbjct: 587 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSGTSGSSGTSGHNHGPMCFVEF 646
Query: 135 DDPKCARTAMDALHG 149
+D A A+ L+G
Sbjct: 647 EDVAHATRALAELYG 661
>gi|323508363|emb|CBQ68234.1| related to small nuclear ribonucleoprotein snRNP U1A [Sporisorium
reilianum SRZ2]
Length = 291
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ +P + E+ LF + GY +++ I P + + FVEF D +
Sbjct: 216 NKMLFLQNIPEGVGKGELESLFSAYSGYVDVQTI---PGKAD-----IAFVEFSDIPSSA 267
Query: 142 TAMDALHGYKF--DDKKPDSPTLKIQFA 167
TA AL+GY F DK LKI FA
Sbjct: 268 TARGALNGYNFGAGDK------LKITFA 289
>gi|13898849|gb|AAK48899.1|AF357912_1 ribonucleoprotein [Labeo rohita]
Length = 179
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 18/139 (12%)
Query: 43 LIGQRRDIAPGINPTIPDVINGV----PSSLRNNAGSPLKKGESN-----LLFVDGLPTD 93
L+ Q + I + P + + N PSS + SP++ G SN L V+ LP +
Sbjct: 26 LLTQPKMIISNMEPQVTNGPNSATANGPSSNSRSCPSPMQTGGSNDDSKTNLIVNYLPQN 85
Query: 94 CTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFD 153
T+ E LF +++ + TG +++ FV + DPK A A++ L+G +
Sbjct: 86 MTQEEFRSLFGSIGEIESCKLVRD--KITG-QSLGYGFVNYIDPKDAEKAINTLNGLRLQ 142
Query: 154 DKKPDSPTLKIQ-FAHFPF 171
K T+K++ F+ PF
Sbjct: 143 TK-----TIKVEAFSQSPF 156
>gi|7670536|dbj|BAA95118.1| Etr-1 [Danio rerio]
Length = 452
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPASAQAAI 425
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 426 QAMNGFQIGMKR-----LKVQL 442
>gi|320589895|gb|EFX02351.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 562
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V +P D + E+ LF GY+ + V R G+ M CFVEF+D A
Sbjct: 348 NTLYVGNIPMDTSEEELKALFSKQRGYKRLSV-----RSKGNGPM--CFVEFEDISFATK 400
Query: 143 AMDALHG 149
+ L+G
Sbjct: 401 TLYELYG 407
>gi|42476252|ref|NP_571569.2| CUGBP Elav-like family member 3 [Danio rerio]
gi|152013393|sp|Q9IBD1.2|CELF3_DANRE RecName: Full=CUGBP Elav-like family member 3; Short=CELF-3;
AltName: Full=Bruno-like protein 1; AltName:
Full=CUG-BP- and ETR-3-like factor 3; AltName:
Full=ELAV-type RNA-binding protein 1; Short=ETR-1;
AltName: Full=RNA-binding protein BRUNOL-1; AltName:
Full=Trinucleotide repeat-containing gene 4 protein
gi|38173873|gb|AAH60923.1| Trinucleotide repeat containing 4 [Danio rerio]
Length = 452
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPASAQAAI 425
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 426 QAMNGFQIGMKR-----LKVQL 442
>gi|37748043|gb|AAH59527.1| Snrpb2 protein [Danio rerio]
Length = 229
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 156 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----ISFVEFESEAQAGVA 207
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 208 KDALQGFR 215
>gi|269868277|gb|ACZ52443.1| Bruno-3 transcript variant 5 [Drosophila virilis]
Length = 372
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LF+ LP + E+ +F PF +V R +++ FV FD+P A
Sbjct: 296 EGRNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFID---RATNQSKCFGFVSFDNPTSA 352
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQ 165
+ A+ A++G++ K+ LK+Q
Sbjct: 353 QAAIQAMNGFQIGTKR-----LKVQ 372
>gi|225707030|gb|ACO09361.1| U2 small nuclear ribonucleoprotein B [Osmerus mordax]
Length = 219
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 146 ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----ISFVEFESEARAGVA 197
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 198 KDALQGFR 205
>gi|348513017|ref|XP_003444039.1| PREDICTED: CUGBP Elav-like family member 2-like [Oreochromis
niloticus]
Length = 531
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 73 AGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV-IHKEPRRTGDRAMVLCF 131
AGS + E LF+ LP +C +++ +F PF +V I K+ + + F
Sbjct: 436 AGSQKEGPEGANLFIYHLPQECGDQDLLQMFMPFGNVVSAKVFIDKQT----NLSKCFGF 491
Query: 132 VEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQF 166
V +D+P A+ A+ A++G++ K+ LK+Q
Sbjct: 492 VSYDNPVSAQAAIQAMNGFQIGMKR-----LKVQL 521
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGD--RAMVLCFVEFDDPKCART 142
+FV +P + E+ LF PF +I ++ RT + ++ CFV F K A
Sbjct: 62 MFVGQIPRSWSETELKELFEPFGAVHQINILRD---RTQNPPQSKGCCFVTFYTRKAALE 118
Query: 143 AMDALHGYK 151
A +ALH K
Sbjct: 119 AQNALHNIK 127
>gi|366992418|ref|XP_003675974.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
gi|342301840|emb|CCC69610.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
Length = 626
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T +E+ LF G+R + +K G M CFVEF+D A
Sbjct: 516 NTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGPM--CFVEFEDISFATR 573
Query: 143 AMDALHGYKFDDKKPDSP-TLKIQFAHFPFHLPSDGDEKCT 182
A+ L+G + S +++ F+ P + + K T
Sbjct: 574 ALAELYGSQLPRPSLSSKGGIRLSFSKNPLGVRGSNNRKGT 614
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV+ LP C +S LF F G++E+ ++ + G + F+EF+D + AM
Sbjct: 169 LFVENLPDKCDSMMLSMLFSQFQGFKEVHMVE---SKKG-----IAFIEFEDEIKSGFAM 220
Query: 145 DALHGYKFDDKKP 157
L +K +KP
Sbjct: 221 TNLQHFKVTPEKP 233
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GL D T + ++ F + + VI R TG R FV++D+P+ A+ AM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIM--DRETG-RPRGFGFVKYDNPEDAKDAM 63
Query: 145 DALHGYKFD 153
DA++G D
Sbjct: 64 DAMNGQSLD 72
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GL D T + ++ F + + VI R TG R FV++D+P+ A+ AM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIM--DRETG-RPRGFGFVKYDNPEDAKDAM 63
Query: 145 DALHGYKFD 153
DA++G D
Sbjct: 64 DAMNGQSLD 72
>gi|428673292|gb|EKX74205.1| nucleolar phosphoprotein, putative [Babesia equi]
Length = 197
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+ N+++V LP T ++ F F +IR++ K + G R FV+F++ + A
Sbjct: 12 KKNIIYVGNLPRQLTESQIKRYFLQFGDVLKIRLM-KSKKTNGSRG--YAFVQFENNEIA 68
Query: 141 RTAMDALHGYKFDDK 155
+ A DA++ Y D K
Sbjct: 69 QIAADAMNNYFIDGK 83
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
++V LP++ +E+ +F Y EIR I + R + F++FDD + A+ A+
Sbjct: 6 VYVGNLPSNVREKEIEDIFHK---YGEIRNIDIKSRSRD--SPAFAFIQFDDRRDAKEAV 60
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A GY+FD K+ L+++F
Sbjct: 61 RARDGYEFDGKR-----LRVEF 77
>gi|156845900|ref|XP_001645839.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156116508|gb|EDO17981.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 683
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T E+ LF G+R R+ + G+ +CFVEF+D A
Sbjct: 562 NTLYVGNLPSDATEHELRQLFSSQPGFR--RLSFRNKNTNGNGHGPICFVEFEDVSFATR 619
Query: 143 AMDALHGYKF 152
A+ L+G +
Sbjct: 620 ALAELYGSQL 629
>gi|158253638|gb|AAI54064.1| tnrc4 protein [Xenopus (Silurana) tropicalis]
Length = 462
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPGSAQAAI 435
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 436 QAMNGFQIGMKR-----LKVQL 452
>gi|123504802|ref|XP_001328836.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911784|gb|EAY16613.1| hypothetical protein TVAG_434500 [Trichomonas vaginalis G3]
Length = 280
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 79 KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
K E LF+ LP + + V +F P+ +++ R R+ + FVEF+ +
Sbjct: 8 KSEKKTLFIANLPIEALEKHVREVFEPYGTILTAFIVNT---RGTVRSRGIAFVEFEKHE 64
Query: 139 CARTAMDALHGYKFDDKKPDSPTLKIQFA 167
A AM A +G KF + + +++Q+A
Sbjct: 65 QAEAAMAATNGMKFWENQ-----IRVQWA 88
>gi|367007687|ref|XP_003688573.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
gi|357526882|emb|CCE66139.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
Length = 619
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP+D T +E+ LF G+R R+ + G+ +CFVEFDD A
Sbjct: 499 NTLYVGNLPSDATEQELRQLFSVQQGFR--RLSFRNKNNNGNGHGPICFVEFDDVSFATR 556
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 557 ALAELYG 563
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 67 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----FAFV 116
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 117 EFEDPRDAEDAIRGRDGYNFDGNR-----LRVELAH 147
>gi|452984744|gb|EME84501.1| hypothetical protein MYCFIDRAFT_182368 [Pseudocercospora fijiensis
CIRAD86]
Length = 479
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF GY+ + R P +CFVEF+D A
Sbjct: 286 NTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNGP---------MCFVEFEDISFA 336
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSD 176
A+ L+G+ + +++ F+ P + S+
Sbjct: 337 TKALHELYGHPLHNSVKGG--IRLSFSKNPLGVRSN 370
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
+ G P + E++++ V LP T++E+S LF+ + + +R+ P+ G+
Sbjct: 670 KKKEGGPTE--ENDVIIVKNLPFQATKKELSDLFKHYANVKTVRL----PKSAGNTHRGF 723
Query: 130 CFVEFDDPKCARTAMDAL 147
FVEF A+TAM+ L
Sbjct: 724 GFVEFMSKSDAKTAMENL 741
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S L+V LP D REV LF + +I + PR G CF+EF+D + A
Sbjct: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIVDID-LKIPPRPPG-----YCFIEFEDARDAE 59
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAH 168
A+ GY FD + L+++ AH
Sbjct: 60 DAIRGRDGYNFDGNR-----LRVELAH 81
>gi|365989942|ref|XP_003671801.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
gi|343770574|emb|CCD26558.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
Length = 742
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T E+ LF G+R + +K G +CFVEF+D A
Sbjct: 626 NTLYVGNLPPDATENELRQLFSCQNGFRRLSFRNKNTNGHGHGHGPMCFVEFEDINFATQ 685
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 686 ALGELYG 692
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 19/96 (19%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFV 132
+ + S ++V LP D REV LF Y+ R++ + PR G FV
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-----FAFV 50
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
EF+DP+ A A+ GY FD + L+++ AH
Sbjct: 51 EFEDPRDAEDAIRGRDGYNFDGNR-----LRVELAH 81
>gi|157103841|ref|XP_001648152.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|157133359|ref|XP_001656219.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|108869334|gb|EAT33559.1| AAEL014167-PA [Aedes aegypti]
gi|108881556|gb|EAT45781.1| AAEL002980-PA [Aedes aegypti]
Length = 216
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF +
Sbjct: 141 NQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PNRHD-----IAFVEFATELQSG 192
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A +AL G+K +PT +KI FA
Sbjct: 193 AAREALQGFKI------TPTHAMKISFA 214
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GLP D RE+ +LF G+ + + TG V+ FV F + + A +AM
Sbjct: 34 LFVAGLPDDVKPREIHNLFSSRPGFDHCLLEY-----TGRGNQVVAFVSFVNHQAALSAM 88
Query: 145 DALHGYKFD 153
AL+G FD
Sbjct: 89 SALNGTVFD 97
>gi|606976|gb|AAA81375.1| ribonucleoprotein [Xenopus laevis]
Length = 462
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPGSAQAAI 435
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 436 QAMNGFQIGMKR-----LKVQL 452
>gi|147907254|ref|NP_001079936.1| CUGBP Elav-like family member 3-A [Xenopus laevis]
gi|152013388|sp|Q91579.2|CEL3A_XENLA RecName: Full=CUGBP Elav-like family member 3-A; Short=CELF-3A;
AltName: Full=Bruno-like protein 1-A; AltName:
Full=CUG-BP- and ETR-3-like factor 3-A; AltName:
Full=ELAV-type RNA-binding protein 1-A; Short=ETR-1-A;
AltName: Full=RNA-binding protein BRUNOL-1-A; AltName:
Full=Trinucleotide repeat-containing gene 4 protein A
gi|34785486|gb|AAH57704.1| Etr-1 protein [Xenopus laevis]
gi|47937574|gb|AAH72134.1| Etr-1 protein [Xenopus laevis]
Length = 462
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPGSAQAAI 435
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
A++G++ K+ LK+Q
Sbjct: 436 QAMNGFQIGMKR-----LKVQL 452
>gi|255731644|ref|XP_002550746.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131755|gb|EER31314.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 665
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMV------LCFVEFDD 136
N L+V LP D T E+ LF P G+R + K T +CFVEF+D
Sbjct: 523 NTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKNQSSTNGSGSTSHNHGPMCFVEFED 582
Query: 137 PKCARTAMDALHG 149
A A+ L+G
Sbjct: 583 VAHATRALAELYG 595
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRV-IHKEPRRTGDR-AMVLCFVEFDDPKCART 142
+FV + T + + F+ GYR R+ + +P+ TG +M FVEFD A
Sbjct: 637 IFVKNISFSTTVESLRNAFKGIPGYRSSRINVKPDPKNTGKTLSMGYGFVEFDSKSNAEK 696
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAH 168
A++A+ GY D+ L+++ +H
Sbjct: 697 AINAMQGYLLDEH-----ALQLKLSH 717
>gi|348538124|ref|XP_003456542.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Oreochromis
niloticus]
Length = 218
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 145 ILFLSNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----IAFVEFESDTQAGVA 196
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 197 KDALQGFR 204
>gi|218200205|gb|EEC82632.1| hypothetical protein OsI_27223 [Oryza sativa Indica Group]
gi|222637626|gb|EEE67758.1| hypothetical protein OsJ_25469 [Oryza sativa Japonica Group]
Length = 497
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF+ LP D EVS LF + R+++V+ + P++T +L EF + AR A+
Sbjct: 104 LFIGMLPRDVKENEVSALFSQYGNIRQLKVL-RSPQKTRKACAIL---EFGSKEHARAAI 159
Query: 145 DALHG 149
+AL+G
Sbjct: 160 EALNG 164
>gi|380482693|emb|CCF41081.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 519
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 338 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP---------MCFVEFEDVSFA 388
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 389 TKALHELYGHPLHNS 403
>gi|310791144|gb|EFQ26673.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 539
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 357 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP---------MCFVEFEDVSFA 407
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 408 TKALHELYGHPLHNS 422
>gi|170103054|ref|XP_001882742.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642113|gb|EDR06370.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP T+ ++ LF + E+R+I P + + FVE+ D A
Sbjct: 168 NKILFLQNLPESVTKEQLLGLFSQYPNLYEVRLI---PTKRD-----IAFVEYMDEGSAG 219
Query: 142 TAMDALHGYKFD 153
A DALH +K D
Sbjct: 220 VAKDALHNFKLD 231
>gi|294463303|gb|ADE77187.1| unknown [Picea sitchensis]
Length = 245
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + E+ LF G+R+++V+ +E R T +CF+E++D A
Sbjct: 132 NTLFIGNLGENTNETELRGLFSGQPGFRQMKVLRQE-RST------VCFIEYEDLHSAAA 184
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
+ L G + ++IQ++ PF
Sbjct: 185 VHNNLQGAVLSSSERGG--MRIQYSKNPF 211
>gi|391341498|ref|XP_003745067.1| PREDICTED: uncharacterized protein LOC100900989 [Metaseiulus
occidentalis]
Length = 462
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 58 IPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK 117
+P ++ +SL N AG + E + LF+ LP D T ++ LF PF +V
Sbjct: 333 LPVALSQHLASLHNPAGKQQEGPEGSNLFIYHLPQDLTDMDLVSLFAPFGEVISAKVF-- 390
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQF 166
R + FV + + A+ A+ ALHG+ DK+ LK+Q
Sbjct: 391 -VDRHTQLSKCFGFVSYSNGLHAQAAIRALHGFAIGDKR-----LKVQL 433
>gi|321448797|gb|EFX61589.1| hypothetical protein DAPPUDRAFT_338859 [Daphnia pulex]
Length = 293
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 55 NPTIPDV--INGVPSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREI 112
NP + + N P G + E LF+ LP + E+ +F PF
Sbjct: 178 NPVLSQIPLANPKPCQTTERKGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISS 237
Query: 113 RVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQF 166
+V R +++ FV FD+P A+ A+ A++G++ K+ LK+Q
Sbjct: 238 KVFID---RATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKR-----LKVQL 283
>gi|310798243|gb|EFQ33136.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 246
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D V+ +F F G+RE+R++ P R G + FVE+D + A
Sbjct: 171 NKILFVQNLPEDYDIDAVTSIFGRFEGFREVRLV---PGRRG-----IAFVEYDGEQGAI 222
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQF 166
TA + G D+ T+K+ +
Sbjct: 223 TAKENTAGMVLG----DTYTIKVTY 243
>gi|261328774|emb|CBH11752.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 757
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G PL + +N++FV TD T ++ LF PF G+ + IH + F
Sbjct: 402 GIPLSETPTNVIFVGQFATDVTEEDIEALFEPFEGFINSKFIHSS---------CIAFGH 452
Query: 134 FDDPKCARTAMDALH 148
FD AR A AL+
Sbjct: 453 FDTVDHARAARVALN 467
>gi|71033823|ref|XP_766553.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353510|gb|EAN34270.1| RNA-binding protein, putative [Theileria parva]
Length = 195
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFD 135
KK ++N+++V LP T ++ F F +IR+ R +R+ FV+F+
Sbjct: 6 SFKKNKNNVIYVGNLPKQLTEEQLKTYFNQFGDVIKIRLF---KSRKTNRSRGYAFVQFE 62
Query: 136 DPKCARTAMDALHGYKFDDK 155
D + A+ A + + Y D K
Sbjct: 63 DHEIAKIAAETMDKYLIDGK 82
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L++ GLP T+ E+ +FRP+ RV+ +E D+ + F+ FD K A A+
Sbjct: 129 LYISGLPKTITQEELETIFRPYGEIITSRVLVQEGN---DKPKGVGFIRFDQRKEAERAI 185
Query: 145 DALHG 149
AL+G
Sbjct: 186 AALNG 190
>gi|72390163|ref|XP_845376.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360473|gb|AAX80887.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70801911|gb|AAZ11817.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 724
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 74 GSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVE 133
G PL + +N++FV TD T ++ LF PF G+ + IH + F
Sbjct: 369 GIPLSETPTNVIFVGQFATDVTEEDIEALFEPFEGFINSKFIHSS---------CIAFGH 419
Query: 134 FDDPKCARTAMDALH 148
FD AR A AL+
Sbjct: 420 FDTVDHARAARVALN 434
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 44/103 (42%), Gaps = 25/103 (24%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYR--EIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
LFV GLP D RE+ LFRPF GY I++ K+P + FV FD A
Sbjct: 9 LFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQP---------VGFVSFDSRSEAEA 59
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHF-PFHLPSDGDEKCTPR 184
A +AL+ + Q+ HF P L CT R
Sbjct: 60 AKNALN-------------MSSQYLHFTPVALKCGPRTLCTQR 89
>gi|321460285|gb|EFX71329.1| sans fille-like protein [Daphnia pulex]
Length = 227
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP + +S LF F G++E+R++ P R + FVEF++ +
Sbjct: 152 NQILFLTNLPEETNEMMLSMLFTQFPGFKEVRLV---PGRHD-----IAFVEFENEVQSA 203
Query: 142 TAMDALHGYKFDDKKPDSPT--LKIQFA 167
A ++L G+K +PT +KI FA
Sbjct: 204 GARESLQGFKI------TPTHSMKISFA 225
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDD 136
L +G S+ LF+ GL R + F PF E+RVI + R TG R+ FV +
Sbjct: 31 LSRGFSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVI--QDRETG-RSRGFGFVSYIT 87
Query: 137 PKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
+ A+ AM+A+ G D + T+++ +A
Sbjct: 88 DQEAQKAMEAMDGRVLDGR-----TIRVNYA 113
>gi|242081063|ref|XP_002445300.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
gi|241941650|gb|EES14795.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
Length = 320
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L E+ LF GY++++V+ + DR V CF+EF+D A +
Sbjct: 221 NTLFIGNLGDTVVEEELRSLFSVQPGYKQMKVLRQ------DRNTV-CFIEFEDVNAATS 273
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
L G ++IQF+ PF
Sbjct: 274 VHQTLQGAVIPSSGRGG--MRIQFSKNPF 300
>gi|156085834|ref|XP_001610326.1| RNA recognition motif containing protein [Babesia bovis T2Bo]
gi|154797579|gb|EDO06758.1| RNA recognition motif containing protein [Babesia bovis]
Length = 187
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
+SN+++V LP + F F ++IR++ + ++TG+ + CF++F+ + A
Sbjct: 8 KSNIIYVGNLPKALNESNIRKYFEQFGTVKKIRLM--KSKKTGN-SRGYCFLQFESNEIA 64
Query: 141 RTAMDALHGYKFD 153
+ A +A++ Y D
Sbjct: 65 KIAAEAMNNYFID 77
>gi|154341082|ref|XP_001566494.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063817|emb|CAM40006.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 648
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 70 RNNAGSPLKKGESNL--LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
R + G+P+ + + LFV +P DCT+ ++ LF + G R++ +HK+ D M
Sbjct: 222 RRSEGAPVGEARKKIMKLFVRNIPLDCTKVDLEELFGVYGGVRQV-TLHKDTSPVQDETM 280
Query: 128 --VLCFVEFDDPKCARTAMDALHGYK 151
++ FV + + A A +H K
Sbjct: 281 MRLIAFVIYTEEGAAERAAREVHNTK 306
>gi|302420163|ref|XP_003007912.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
gi|261353563|gb|EEY15991.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
Length = 450
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 266 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP---------MCFVEFEDVTFA 316
Query: 141 RTAMDALHG 149
A++ L+G
Sbjct: 317 TKALNELYG 325
>gi|158292878|ref|XP_314164.4| AGAP005249-PA [Anopheles gambiae str. PEST]
gi|157017199|gb|EAA09490.4| AGAP005249-PA [Anopheles gambiae str. PEST]
Length = 862
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+ V +P + +EV LF+PF + +R+ K D CFVE+D+ A+ A
Sbjct: 714 ILVRNIPFQASAKEVRDLFKPFGDIKSLRLPKKMAASADDTHRGFCFVEYDEESDAKRAF 773
Query: 145 DAL 147
D L
Sbjct: 774 DTL 776
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 56 PTIPDVINGVPSSLR---NNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREI 112
P + I+G+ + + + A + GE++ LFV + ++ + +F G+
Sbjct: 556 PEVVQKIDGISTENKAAVDEAVTEPADGETSTLFVKNISFSTSQTDFQRIFASLNGFLSA 615
Query: 113 RVIHKEPRRTGD-RAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+ K +R G +M FVEF + A TAM+A+ G+ D K L+I+ +H
Sbjct: 616 VIRAKPSKRPGQLMSMGFGFVEFRSKEDAVTAMNAMQGFLLDGHK-----LEIKLSH 667
>gi|366988651|ref|XP_003674093.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
gi|342299956|emb|CCC67712.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
Length = 869
Score = 41.2 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 90 LPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHG 149
LP + TR++V LF F + +RV P++ A FVEF PK A AMD L G
Sbjct: 749 LPFEATRKDVFELFNSFGQLKSVRV----PKKFDKSARGFAFVEFLLPKEAENAMDQLQG 804
>gi|302769730|ref|XP_002968284.1| hypothetical protein SELMODRAFT_409510 [Selaginella moellendorffii]
gi|302788648|ref|XP_002976093.1| hypothetical protein SELMODRAFT_175284 [Selaginella moellendorffii]
gi|300156369|gb|EFJ22998.1| hypothetical protein SELMODRAFT_175284 [Selaginella moellendorffii]
gi|300163928|gb|EFJ30538.1| hypothetical protein SELMODRAFT_409510 [Selaginella moellendorffii]
Length = 235
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP D + ++ LF G++E+R++ +P + FVE+ + A
Sbjct: 161 NNILFVQKLPHDTSSAQLQMLFSSIPGFKEVRMVDAKPG--------IAFVEYAEVDQAS 212
Query: 142 TAMDALHGYKFDD 154
A H ++ ++
Sbjct: 213 VAKSTFHAFRVNE 225
>gi|380483560|emb|CCF40546.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 246
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LFV LP D V+ +F F G+RE+R++ P R G + FVE++ + A
Sbjct: 171 NKILFVQNLPEDYDVDAVTSIFGRFEGFREVRLV---PGRRG-----IAFVEYEGEQGAI 222
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQF 166
TA + G DS T+K+ +
Sbjct: 223 TAKENTAGMVLG----DSHTIKVTY 243
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDP 137
E+ LFV L T ++ +F P G+ RV K +P+R G +M FVEF
Sbjct: 565 AETASLFVRNLNFATTTNRLAEIFEPLDGFVSARVKTKIDPKRPGQTLSMGFGFVEFRSK 624
Query: 138 KCARTAMDALHGYKFD 153
A+ A+ A+ GY D
Sbjct: 625 DQAQAALKAMDGYVLD 640
>gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 145 ILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----IAFVEFESDLQAGVA 196
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G++ + +KI FA
Sbjct: 197 KDALQGFRIT----ATCAMKITFA 216
>gi|396080871|gb|AFN82491.1| putative polyadenylate-binding-like RNA-binding protein
[Encephalitozoon romaleae SJ-2008]
Length = 247
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P + ++ +F PF R I+++ +EPR + VEF DP A+ A+
Sbjct: 5 LFVSNFPESYSEENINLIFSPFGEIRSIKIL-REPR-------MFSIVEFRDPLDAKAAI 56
Query: 145 DALHG 149
D+L+G
Sbjct: 57 DSLNG 61
>gi|367021232|ref|XP_003659901.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
gi|347007168|gb|AEO54656.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
Length = 565
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 380 NTLYVGNLPLDTSEEELKAMFSRQRGYKRLCFRTKQNGP---------MCFVEFEDVTFA 430
Query: 141 RTAMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEK 180
A+ L+G + +++ F+ P + S+ ++
Sbjct: 431 TKALHELYGQPLHNSVKGG--IRLSFSKNPLGVRSNQNQN 468
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 19/91 (20%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFVEFDDP 137
S ++V LP D E+ LF Y+ R++ + PR G F+EFDDP
Sbjct: 5 SRTIYVGNLPGDVRESEIDDLF-----YKYGRILDIDLKLPPRPPG-----YAFIEFDDP 54
Query: 138 KCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+ A A+ A GY FD + L+++FAH
Sbjct: 55 RDAEDAIKARDGYVFDGHR-----LRVEFAH 80
>gi|255568059|ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
gi|223535714|gb|EEF37378.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
Length = 337
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + E+ LF G+++++V+ +E R T +CF+EF+D A
Sbjct: 233 NTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQE-RHT------VCFIEFEDVNSASN 285
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPFHLPSDGDEKC 181
+L G S ++IQ++ PF DG
Sbjct: 286 VHRSLQGAVIPSS--GSVGMRIQYSKNPFGKRKDGSHSV 322
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 66 PSSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDR 125
P+ L +N+ E +F+ GLP D RE+ +L R GY +V +K G++
Sbjct: 42 PTVLVDNSNRGPTHDEVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNYK-----GEK 96
Query: 126 AMVLCFVEFDDPKCARTAMDALHGYKFD 153
M F F + A A +AL FD
Sbjct: 97 PM--GFALFSTSQFAIAAKEALQDMLFD 122
>gi|392574488|gb|EIW67624.1| hypothetical protein TREMEDRAFT_33230 [Tremella mesenterica DSM
1558]
Length = 250
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+N+LFV LP E+ +F G EIR I P + + FVE+ D CA
Sbjct: 175 NNVLFVQNLPEGTEADELREVFGTHPGLVEIRTI---PAKKD-----IAFVEYTDEACAG 226
Query: 142 TAMDALHGYKFD 153
A ALH +K D
Sbjct: 227 LAKTALHNFKID 238
>gi|146183888|ref|XP_001027266.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|146143436|gb|EAS07024.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 247
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LF++ LP + + F F G++E+R++ P++ + FVE++D A A+
Sbjct: 177 LFLENLPINSNTEVIKAFFATFPGFKEVRLV---PQKR------VAFVEYEDENKATAAL 227
Query: 145 DALHGYKFDDK 155
+L +K D+
Sbjct: 228 ASLQSFKIGDQ 238
>gi|226488853|emb|CAX74776.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP D +S LF F GYRE+R++ P R + FVEF + A
Sbjct: 258 NKILFLTNLPDDSDEAMLSMLFGQFTGYREVRMV---PGRHD-----IAFVEFGNEVEAS 309
Query: 142 TAMDALHGYKF 152
A L G+
Sbjct: 310 AAKLGLQGFNI 320
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDD 136
+ + S ++V LP D REV LF + +I + PR G FVEF+D
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDID-LKVPPRPPG-----YAFVEFED 54
Query: 137 PKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
P+ A A+ GY FD + L+++ AH
Sbjct: 55 PRDAEEAIAGRDGYNFDGHR-----LRVEAAH 81
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ +LFR F Y + R + + F F + A
Sbjct: 71 EVRTLFVAGLPEDVKPREIYNLFREFPDYESSHL-----RSPSNSSQPFAFAVFASQQSA 125
Query: 141 RTAMDALHGYKFDDKK 156
A AL+G FD +K
Sbjct: 126 IMAKHALNGLVFDLEK 141
>gi|324507603|gb|ADY43223.1| U2 small nuclear ribonucleoprotein B [Ascaris suum]
Length = 226
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF LP + T + +S LF P+ G ++IR I P + FVEF+ A
Sbjct: 151 NKILFCTNLPEETTEQMLSLLFNPYPGLKDIRRIPNRPD--------IAFVEFESEGEAT 202
Query: 142 TAMDALHGYK 151
A +AL+ +K
Sbjct: 203 VARNALNNFK 212
>gi|224100531|ref|XP_002311913.1| predicted protein [Populus trichocarpa]
gi|222851733|gb|EEE89280.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 71 NNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLC 130
+N G P + E +F+ G P D RE+ +L R GY +V +K GD+AM
Sbjct: 44 SNRGPPTHE-EVRTIFITGFPDDVKERELQNLLRWLPGYEASQVNYK-----GDKAM--G 95
Query: 131 FVEFDDPKCARTAMDALHGYKFD 153
F F + A A D+L FD
Sbjct: 96 FALFSSSQHAIAAKDSLQDMVFD 118
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + E+ LF G+++++++ +E R T +CF+EF+D A
Sbjct: 227 NTLFIGNLGQNINEDELRGLFSVQPGFKQMKILRQE-RHT------VCFIEFEDLNSATN 279
Query: 143 AMDALHG 149
+L G
Sbjct: 280 VHHSLQG 286
>gi|387916084|gb|AFK11651.1| CUGBP Elav-like family member 2 isoform 2 [Callorhinchus milii]
Length = 513
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+FV +P T +E+ LF P+ +I V+ ++ + ++ CFV F K A A
Sbjct: 48 MFVGQIPRSWTEKELKELFEPYGAVHQINVL-RDRSQNPPQSKGCCFVTFYTRKAALEAQ 106
Query: 145 DALHGYK 151
+ALH K
Sbjct: 107 NALHNIK 113
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV L T + +S F P G+ RV +E + G +M F EF K A+ A+
Sbjct: 598 LFVRNLNFSTTTKILSEAFTPLDGFLSARVKTREDPKRGTLSMGFGFAEFRSTKQAQAAL 657
Query: 145 DALHGYKFDDKKPDSPTLKIQFAH 168
+ + GY + K L+++ +H
Sbjct: 658 ETMDGYTLEGHK-----LQVRASH 676
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
S + + LP + T+++V LF + R +RV P++ A F EF K A+
Sbjct: 698 STKIIIKNLPFETTKKDVRALFGAYGQLRSVRV----PKKIDRAARGFAFAEFTTAKEAQ 753
Query: 142 TAMDALH 148
+AMDAL
Sbjct: 754 SAMDALR 760
>gi|449297722|gb|EMC93739.1| hypothetical protein BAUCODRAFT_48247, partial [Baudoinia
compniacensis UAMH 10762]
Length = 444
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 25 ITAVASVKGYSSPLPDPNLIGQRRDIAPGINPTIPD--VINGVPSSLRNNAGSPL----- 77
+T + G+ SP P R++ P ++PT NG SS P
Sbjct: 243 LTTNGNAGGFGSP--SPAAFTSSRNVEPAMSPTALSGGEQNGTHSSTNTRMQYPPVNPAD 300
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFD 135
+ N L+V LP + + E+ +F GY+ + R P +CFVEF+
Sbjct: 301 QNPPCNTLYVGNLPINTSEDELKAIFSRQRGYKRLCFRTKQNGP---------MCFVEFE 351
Query: 136 DPKCARTAMDALHGYKFDDK 155
D A A++ L+G+ +
Sbjct: 352 DVGFATRALNDLYGFVLSNS 371
>gi|389593935|ref|XP_003722216.1| putative RNA binding protein [Leishmania major strain Friedlin]
gi|321438714|emb|CBZ12474.1| putative RNA binding protein [Leishmania major strain Friedlin]
Length = 664
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 70 RNNAGSPLKKGESNL--LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
R + G P+ + + LFV +P DCT+ ++ LF + R++ +HK+ D AM
Sbjct: 220 RRSEGGPVGEARKKIMKLFVRNVPLDCTKIDLEKLFGAYGNVRQV-TLHKDTSPVQDEAM 278
Query: 128 V--LCFVEFDDPKCARTAMDALHGYK 151
V + FV + + A A +H K
Sbjct: 279 VRLIAFVIYTEEGAAERAAREVHNTK 304
>gi|82542283|gb|ABB82038.1| RNP4F [Drosophila melanogaster]
Length = 260
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N +FV L C++ E+ LF PF +++R++HK + + +VEF+ P A
Sbjct: 181 EINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHK----LNKQFKGIAYVEFEKPGEA 236
Query: 141 RTAMDALHGYKFD 153
+ A+ G F
Sbjct: 237 QRAVAGRDGCLFK 249
>gi|119568196|gb|EAW47811.1| hCG22524, isoform CRA_b [Homo sapiens]
Length = 174
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++ LP + +S LF F G++E+ ++ P R + FVEF++ A A
Sbjct: 101 ILFLNNLPEETNEMMLSMLFNQFPGFKEVCLV---PGRHD-----IAFVEFENDGKAGAA 152
Query: 144 MDALHGYKFDDKKPDSPTLKIQFA 167
DAL G+K S +KI +A
Sbjct: 153 RDALQGFKI----TTSHAMKITYA 172
>gi|323309712|gb|EGA62920.1| Npl3p [Saccharomyces cerevisiae FostersO]
Length = 419
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++ + A A+
Sbjct: 132 LFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESAAKAI 180
Query: 145 DALHGYKFDDK 155
+ +HG F ++
Sbjct: 181 EEVHGKSFANQ 191
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP+D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 276 NTLYVGNLPSDTSEEELKAMFSKQRGYKRLCFRTKSNGP---------MCFVEFEDVSFA 326
Query: 141 RTAMDALHGY 150
A+ L+G+
Sbjct: 327 TKALHELYGH 336
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFVEFDDP 137
S ++V LP D RE+ LF Y+ R++ + PR G CF+EF+D
Sbjct: 6 SRTIYVGNLPGDVREREIEDLF-----YKYGRIVDIDLKLPPRPPG-----YCFIEFEDA 55
Query: 138 KCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+ A A+ GY FD + L+++ AH
Sbjct: 56 RDAEDAIRGRDGYNFDGNR-----LRVEIAH 81
>gi|346977589|gb|EGY21041.1| RNA binding protein [Verticillium dahliae VdLs.17]
Length = 508
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ +F GY+ + R P +CFVEF+D A
Sbjct: 324 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP---------MCFVEFEDVTFA 374
Query: 141 RTAMDALHG 149
A++ L+G
Sbjct: 375 TKALNELYG 383
>gi|226469924|emb|CAX70243.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
gi|226488855|emb|CAX74777.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP D +S LF F GYRE+R++ P R + FVEF + A
Sbjct: 258 NKILFLTNLPDDSDEAMLSMLFGQFTGYREVRMV---PGRHD-----IAFVEFGNEVEAS 309
Query: 142 TAMDALHGYKF 152
A L G+
Sbjct: 310 AAKLGLQGFNI 320
>gi|323338031|gb|EGA79266.1| Npl3p [Saccharomyces cerevisiae Vin13]
Length = 357
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++ + A A+
Sbjct: 127 LFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESAAKAI 175
Query: 145 DALHGYKFDDK 155
+ +HG F ++
Sbjct: 176 EEVHGKSFANQ 186
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPF--VGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
+FV LP+D +R++ +F + + + +I+ P FVEFDDP+ AR
Sbjct: 9 VFVGNLPSDVKQRDLEDIFYKYGRINFIDIKFTRDVP---------FAFVEFDDPRDARD 59
Query: 143 AMDALHGYKFD 153
A+ GY FD
Sbjct: 60 AVHGRDGYDFD 70
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV GL D T + ++ F + + VI R TG R FV++D+P+ A+ AM
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIM--DRETG-RPRGFGFVKYDNPEDAKDAM 63
Query: 145 DALHGYKFDDK 155
DA++G D +
Sbjct: 64 DAMNGQSLDGR 74
>gi|318065773|ref|NP_001187499.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
gi|308322301|gb|ADO28288.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus furcatus]
gi|308323171|gb|ADO28722.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
Length = 219
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF+ LP + +S LF F G++E+R++ P + + FVEF+ A A
Sbjct: 146 ILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV---PGKHD-----IAFVEFEGEAQAGVA 197
Query: 144 MDALHGYK 151
DAL G++
Sbjct: 198 KDALQGFR 205
>gi|425772063|gb|EKV10488.1| U1 small nuclear ribonucleoprotein, putative [Penicillium digitatum
Pd1]
gi|425777240|gb|EKV15421.1| U1 small nuclear ribonucleoprotein, putative [Penicillium digitatum
PHI26]
Length = 249
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP D T+ +S +F F G++E+R++ P R G + FVE++ A
Sbjct: 173 NKILFLRELPDDATQEGLSAIFGRFEGFQEVRLV---PGRKG-----IAFVEYEAEAGAI 224
Query: 142 TAMDALHGYKFDDK 155
+A +A G D+
Sbjct: 225 SAKEATSGMPMGDQ 238
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDD 136
+ + S ++V LP D REV LF + +I + PR G FVEF+D
Sbjct: 1 MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVDID-LKVPPRPPG-----YAFVEFED 54
Query: 137 PKCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
P+ A A+ GY FD + L+++ AH
Sbjct: 55 PRDAEEAIAGRDGYNFDGHR-----LRVEAAH 81
>gi|367003990|ref|XP_003686728.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
gi|357525030|emb|CCE64294.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
Length = 588
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T +E+ LF G+R R+ + G+ +CFVEFDD A
Sbjct: 451 NTLYVGNLPPDATEQELRQLFSSQPGFR--RLSFRNKNNNGNGHGPMCFVEFDDVSFATV 508
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 509 ALAELYG 515
>gi|170059947|ref|XP_001865584.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878529|gb|EDS41912.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 892
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 62 INGVP---SSL-RNNAGSPLK-----KGESNLLFVDGLPTDCTRREVSHLFRPFVGYREI 112
+NG P SSL R+ + P K + E N LFV GLP + T ++ LF P +++
Sbjct: 699 LNGRPVFISSLARDKSARPNKFKYSERFEPNKLFVKGLPFEATPDDIRKLFEPHGKLKDV 758
Query: 113 RVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFD 153
RV++ R+G ++ L +VE++ A++A+ + Y D
Sbjct: 759 RVVY---YRSG-KSKGLAYVEYESEAAAKSAVVHMDQYCMD 795
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+++ LP DC++RE+ F F R+I+ E +++ F+EF D + AR A+
Sbjct: 9 IYIGNLPEDCSQRELEEEFEKFG-----RIIYCELKKSYS-GSPFAFIEFSDSRDARDAI 62
Query: 145 DALHGYKFDDKK 156
GY+F KK
Sbjct: 63 RDKDGYEFHGKK 74
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E +F+ GLP D RE+ +L R GY +V K G+ M F F P+ A
Sbjct: 48 EVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFK-----GEHPM--GFALFSTPQLA 100
Query: 141 RTAMDALHGYKFD 153
A DAL FD
Sbjct: 101 VAAKDALQEMVFD 113
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + E+ LF G+++++++ +E R T +CF+EF+D A
Sbjct: 224 NTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQE-RHT------VCFIEFEDMNTATN 276
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
+L G S ++IQ++ PF
Sbjct: 277 VHHSLQGAVIPSS--GSVGMRIQYSKNPF 303
>gi|440472158|gb|ELQ41041.1| RNA binding protein [Magnaporthe oryzae Y34]
Length = 622
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ F GY+ + R P +CFVEF+D A
Sbjct: 418 NTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGP---------MCFVEFEDVSFA 468
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 469 TKALHELYGHMLHNS 483
>gi|398366591|ref|NP_010720.3| Npl3p [Saccharomyces cerevisiae S288c]
gi|400605|sp|Q01560.1|NOP3_YEAST RecName: Full=Nucleolar protein 3; AltName: Full=Mitochondrial
targeting suppressor 1 protein; AltName: Full=Nuclear
polyadenylated RNA-binding protein 1
gi|4040|emb|CAA46817.1| nucleolar protein [Saccharomyces cerevisiae]
gi|172052|gb|AAA34818.1| Npl3p [Saccharomyces cerevisiae]
gi|288587|emb|CAA50291.1| Mts1p [Saccharomyces cerevisiae]
gi|927699|gb|AAB64865.1| Npl3p: nucleolar RNA processing and export protein [Saccharomyces
cerevisiae]
gi|151942401|gb|EDN60757.1| nuclear shuttling protein [Saccharomyces cerevisiae YJM789]
gi|190404638|gb|EDV07905.1| nucleolar protein NOP3 [Saccharomyces cerevisiae RM11-1a]
gi|259145668|emb|CAY78932.1| Npl3p [Saccharomyces cerevisiae EC1118]
gi|285811446|tpg|DAA12270.1| TPA: Npl3p [Saccharomyces cerevisiae S288c]
gi|323333961|gb|EGA75347.1| Npl3p [Saccharomyces cerevisiae AWRI796]
gi|323349057|gb|EGA83289.1| Npl3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355452|gb|EGA87274.1| Npl3p [Saccharomyces cerevisiae VL3]
gi|365766219|gb|EHN07718.1| Npl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300550|gb|EIW11641.1| Npl3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++ + A A+
Sbjct: 127 LFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESAAKAI 175
Query: 145 DALHGYKFDDK 155
+ +HG F ++
Sbjct: 176 EEVHGKSFANQ 186
>gi|254580201|ref|XP_002496086.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
gi|238938977|emb|CAR27153.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
Length = 745
Score = 40.4 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T +E+ LF G+R + +K G M CFVEF+D A
Sbjct: 617 NTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGPM--CFVEFEDVSFATR 674
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 675 ALAELYG 681
>gi|349577479|dbj|GAA22648.1| K7_Npl3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 414
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++ + A A+
Sbjct: 127 LFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESAAKAI 175
Query: 145 DALHGYKFDDK 155
+ +HG F ++
Sbjct: 176 EEVHGKSFANQ 186
>gi|389645993|ref|XP_003720628.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|86196803|gb|EAQ71441.1| hypothetical protein MGCH7_ch7g848 [Magnaporthe oryzae 70-15]
gi|351638020|gb|EHA45885.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|440479486|gb|ELQ60251.1| RNA binding protein [Magnaporthe oryzae P131]
Length = 622
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ F GY+ + R P +CFVEF+D A
Sbjct: 418 NTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGP---------MCFVEFEDVSFA 468
Query: 141 RTAMDALHGYKFDDK 155
A+ L+G+ +
Sbjct: 469 TKALHELYGHMLHNS 483
>gi|413956010|gb|AFW88659.1| hypothetical protein ZEAMMB73_209786 [Zea mays]
Length = 61
Score = 40.4 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 102 LFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
LF+ + G+RE+R+I +P + FVEF+D + AM AL G+K + P
Sbjct: 6 LFQQYPGFREVRMIEAKPG--------IAFVEFEDDGQSMVAMQALQGFKITPENP 53
>gi|351712152|gb|EHB15071.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 272
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 74 GSPLKKGESN-LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
PL + N +LF+ LP + +S F F G++E R++ P R + FV
Sbjct: 162 AQPLSENPPNHILFLTNLPEETNELMLSMPFNQFPGFQEARLV---PGRHD-----IAFV 213
Query: 133 EFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
EFD+ + A A +AL GYK +KI FA
Sbjct: 214 EFDEVQ-AGAAREALQGYKITQNN----AMKISFA 243
>gi|255081268|ref|XP_002507856.1| predicted protein [Micromonas sp. RCC299]
gi|226523132|gb|ACO69114.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 65 VPSSLRNNAGSPLKKGES-------NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK 117
VP S+R A S GES N + V L D +++ LFRPF I V
Sbjct: 184 VPPSMRAGASSGASMGESMNRRREENSVRVSNLSEDTREQDLQELFRPFGPVTRIYVAFN 243
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQFA 167
R TG+ + FV F + A+ A++ L GY +D+ L++++A
Sbjct: 244 --RETGE-SRGFAFVNFVNKDDAQRAINKLDGYGYDN-----LILRVEWA 285
>gi|50289145|ref|XP_447002.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526311|emb|CAG59935.1| unnamed protein product [Candida glabrata]
Length = 383
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++ + A A+
Sbjct: 107 LFVRPFPLDVQESELNEIFGPFGAMKEVKILNG-----------FAFVEFEEAESASKAI 155
Query: 145 DALHGYKFDDKKPDSPTLKIQFAHFP 170
+ ++G F ++ L++ F+ P
Sbjct: 156 EEVNGKTFANQ-----PLEVMFSKMP 176
>gi|145544152|ref|XP_001457761.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425579|emb|CAK90364.1| unnamed protein product [Paramecium tetraurelia]
Length = 228
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 74 GSPLKKGE-SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFV 132
S L +GE +N+L ++ LP T +S LFR + GY I++I P R L FV
Sbjct: 145 SSNLNQGEINNVLLIESLPPFVTEIMLSELFRQYPGYSLIKLI---PARG------LAFV 195
Query: 133 EFDDPKCARTAMDALHGYK 151
E+ + A A+ L +K
Sbjct: 196 EYQNDDQATVALKGLSNFK 214
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N LFV GLP T+ E+ +F+ + +E+R++ R G + L +VE+ D A
Sbjct: 748 EKNKLFVKGLPITTTKEELEEIFKIYGALKEVRLV---TYRNG-HSKGLAYVEYCDEATA 803
Query: 141 RTAMDALHGYKFDDK 155
A+ + G K K
Sbjct: 804 AKALLGIDGMKIHGK 818
>gi|449447968|ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 335
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + E+ LF G+++++++ +E R T +CF+EF+D A
Sbjct: 231 NTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQE-RHT------VCFIEFEDVNNATN 283
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAHFPF 171
+L G S ++IQF+ PF
Sbjct: 284 VHHSLQGAVIPSS--GSVGMRIQFSKNPF 310
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E +F+ GLP D RE+ +L R GY +V K G++ M F F + + A
Sbjct: 55 EVRTIFITGLPEDVKERELQNLLRWLPGYEASQVNFK-----GEKPM--GFALFSNAQFA 107
Query: 141 RTAMDALHGYKFD 153
A DAL FD
Sbjct: 108 IAAKDALQDMVFD 120
>gi|330794853|ref|XP_003285491.1| hypothetical protein DICPUDRAFT_149370 [Dictyostelium purpureum]
gi|325084582|gb|EGC38007.1| hypothetical protein DICPUDRAFT_149370 [Dictyostelium purpureum]
Length = 352
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
SN +F+ GLPT+ T ++ LF P E +++ + + R L V + D + A
Sbjct: 122 SNNVFIKGLPTEYTMDQLKALFSPHGEILESKIL-TDISTSASRGQAL--VRYGDVQSAS 178
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFAH 168
A+ L+GY D PD P L ++FA
Sbjct: 179 NAVKELNGYIIQD--PDKP-LIVKFAE 202
>gi|255953987|ref|XP_002567746.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589457|emb|CAP95601.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 249
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP D T+ +S +F F G++E+R++ P R G + FVE++ A
Sbjct: 173 NKILFLRELPDDATQEGLSAIFGRFEGFQEVRLV---PGRKG-----IAFVEYEAEAGAI 224
Query: 142 TAMDALHGYKFDDK 155
+A +A G D+
Sbjct: 225 SAKEATSGMPMGDQ 238
>gi|195444819|ref|XP_002070044.1| GK11234 [Drosophila willistoni]
gi|194166129|gb|EDW81030.1| GK11234 [Drosophila willistoni]
Length = 571
Score = 40.4 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 27 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 84
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 85 EAAKQDLQQGVRFD---PDMPQTIRLEFA 110
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGD-RAMVLCFVEFDDPK 138
++ LFV L T + ++ +F+P G+ RV K +P++ G +M F+EF
Sbjct: 608 DTTTLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKS 667
Query: 139 CARTAMDALHGYKFDDKK 156
A+ A+ A+ GY D+ K
Sbjct: 668 QAQAAIKAMDGYTLDNHK 685
>gi|353244298|emb|CCA75715.1| hypothetical protein PIIN_09705 [Piriformospora indica DSM 11827]
Length = 91
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 67 SSLRNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA 126
++ + AG L G + +LFV L T ++ LF + G R+IR I E + G
Sbjct: 2 AAAQARAGPKLPPGANRILFVKNLSYSITGEDLYDLFGRYGGIRQIR-IGNEAKTKGT-- 58
Query: 127 MVLCFVEFDDPKCARTAMDALHGYKFDDK 155
FV FDD A+ A++ L+G+ ++
Sbjct: 59 ---AFVVFDDVMDAKNALEHLNGFHLQER 84
>gi|256270661|gb|EEU05825.1| Npl3p [Saccharomyces cerevisiae JAY291]
gi|323305350|gb|EGA59095.1| Npl3p [Saccharomyces cerevisiae FostersB]
Length = 409
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +E+++++ FVEF++ + A A+
Sbjct: 122 LFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESAAKAI 170
Query: 145 DALHGYKFDDK 155
+ +HG F ++
Sbjct: 171 EEVHGKSFANQ 181
>gi|255711664|ref|XP_002552115.1| KLTH0B07546p [Lachancea thermotolerans]
gi|238933493|emb|CAR21677.1| KLTH0B07546p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D T E+ LF G+R + +K G M CFVEF+D A
Sbjct: 521 NTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGPM--CFVEFEDVAHATR 578
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 579 ALAELYG 585
>gi|443896718|dbj|GAC74062.1| spliceosomal protein snRNP-U1A/U2B [Pseudozyma antarctica T-34]
Length = 581
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ +P + E+ LF + GY +++ I P + + FVEF D +
Sbjct: 246 NKMLFLQKIPDGVGKGELESLFSAYSGYVDVQTI---PGKAD-----IAFVEFSDIPSSV 297
Query: 142 TAMDALHGYKF 152
TA AL+GY F
Sbjct: 298 TARGALNGYNF 308
>gi|409079579|gb|EKM79940.1| hypothetical protein AGABI1DRAFT_127618 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1064
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 89 GLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDA 146
G+P D + LFR GYR + R H P +CFVEF+D A AM
Sbjct: 845 GMPQDHLEESLRELFRNQPGYRRLCFRQKHNGP---------MCFVEFEDVGFAARAMSD 895
Query: 147 LHG 149
LHG
Sbjct: 896 LHG 898
>gi|198431689|ref|XP_002121627.1| PREDICTED: similar to CUG triplet repeat, RNA binding protein 2
[Ciona intestinalis]
Length = 498
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 49 DIAPGINPTIPDVIN-GVPSSLRNN----------AGSPLKKGESNLLFVDGLPTDCTRR 97
A GINPT + P+S+ N AGS + E + LF+ LPT T
Sbjct: 368 STATGINPTAHMLAALTSPTSMYNQSMMHPHNSSPAGSHKEGPEGSNLFIYHLPTHFTDH 427
Query: 98 EVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKP 157
++ F F +V + + + FV +D+P A+ A+ A+HG++ K+
Sbjct: 428 DLMQTFFTFGTIVSAKVF---IDKQTNLSKCFGFVSYDNPASAQHAIQAMHGFQIGMKR- 483
Query: 158 DSPTLKIQF 166
LK+Q
Sbjct: 484 ----LKVQL 488
>gi|426192468|gb|EKV42404.1| hypothetical protein AGABI2DRAFT_188573 [Agaricus bisporus var.
bisporus H97]
Length = 911
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 89 GLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDA 146
G+P D + LFR GYR + R H P +CFVEF+D A AM
Sbjct: 692 GMPQDHLEESLRELFRNQPGYRRLCFRQKHNGP---------MCFVEFEDVGFAARAMSD 742
Query: 147 LHG 149
LHG
Sbjct: 743 LHG 745
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDPKCART 142
LFV L D T +F+P G+ R+ K +P+R G +M FV+F A+
Sbjct: 600 LFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQA 659
Query: 143 AMDALHGYKFD 153
A+ A++GYK D
Sbjct: 660 ALAAMNGYKLD 670
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDPKCART 142
LFV L D T +F+P G+ R+ K +P+R G +M FV+F A+
Sbjct: 601 LFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQA 660
Query: 143 AMDALHGYKFD 153
A+ A++GYK D
Sbjct: 661 ALAAMNGYKLD 671
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGDR-AMVLCFVEFDDPKCART 142
LFV L D T +F+P G+ R+ K +P+R G +M FV+F A+
Sbjct: 601 LFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQA 660
Query: 143 AMDALHGYKFD 153
A+ A++GYK D
Sbjct: 661 ALAAMNGYKLD 671
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 19/91 (20%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFVEFDDP 137
S ++V LP D E+ LF Y+ R++ + PR G F+EFDDP
Sbjct: 5 SRTIYVGNLPGDVRESEIDDLF-----YKYGRILDIDLKLPPRPPG-----YAFIEFDDP 54
Query: 138 KCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+ A A+ A GY FD + L+++FAH
Sbjct: 55 RDAEDAIKARDGYVFDGHR-----LRVEFAH 80
>gi|413953431|gb|AFW86080.1| hypothetical protein ZEAMMB73_802063, partial [Zea mays]
Length = 177
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 76 PLKKGESNLLFVDGLPTDCTRREVSHLFR 104
PL SN L+++G+P+DCTRREVS + R
Sbjct: 134 PLPPDASNTLYIEGVPSDCTRREVSRILR 162
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 78 KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDP 137
K+ E LFV L C EV +F PF E V+ R ++ FV +
Sbjct: 99 KRNEERKLFVGMLSKKCNENEVRMMFAPFGTIEECTVL----REQNGQSRGCAFVTYASK 154
Query: 138 KCARTAMDALH 148
+CA+ A+ +H
Sbjct: 155 QCAQNAIKGMH 165
>gi|194888671|ref|XP_001976954.1| GG18501 [Drosophila erecta]
gi|190648603|gb|EDV45881.1| GG18501 [Drosophila erecta]
Length = 896
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N +FV L C++ E+ LF PF +++R++HK ++ + +VEF+ P A
Sbjct: 726 EINKIFVRNLHPACSKEELHELFSPFGSIKDVRLVHKLNKQFKG----IAYVEFEKPGEA 781
Query: 141 RTAMDALHGY 150
+ A+ G+
Sbjct: 782 QRAVAGRDGH 791
>gi|363751515|ref|XP_003645974.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889609|gb|AET39157.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
Length = 319
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
LFV P D E++ +F PF +++++++ FVEF+ + A A+
Sbjct: 38 LFVRPFPLDVQESELNEIFSPFGALKDVKILNG-----------FAFVEFEQAEAAEQAI 86
Query: 145 DALHGYKFDDK 155
+ ++G F D+
Sbjct: 87 NEVNGKSFADQ 97
>gi|384496525|gb|EIE87016.1| hypothetical protein RO3G_11727 [Rhizopus delemar RA 99-880]
Length = 292
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+++LF+ LP T++++ LF+ + G+RE+R + P + + FVE+++ +
Sbjct: 217 NSILFLQNLPETITQQQLVDLFQRYPGFREVRTV---PAKKS-----IAFVEYENEIQSA 268
Query: 142 TAMDALHGYKFDDKKPDSPTLKIQFA 167
A L GY PD LK+ FA
Sbjct: 269 VARAELSGYFLG---PDQ-ALKVTFA 290
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKE----PRRTGDRAMVLCFVEFDDP 137
S ++V LP D RE+ LF Y+ R++ + PR G CF+EF+D
Sbjct: 6 SRTIYVGNLPGDVREREIEDLF-----YKYGRIVDIDLKLPPRPPG-----YCFIEFEDG 55
Query: 138 KCARTAMDALHGYKFDDKKPDSPTLKIQFAH 168
+ A A+ GY FD + L+++ AH
Sbjct: 56 RDAEDAIRGRDGYNFDGNR-----LRVEIAH 81
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
L++ GLP T+ E+ +FRP+ RV+ ++ D+ + F+ FD K A A+
Sbjct: 169 LYISGLPKTITQEELETIFRPYGEIITSRVLIQD---GNDKPKGVGFIRFDQRKEAERAI 225
Query: 145 DALHG 149
AL+G
Sbjct: 226 QALNG 230
>gi|328850245|gb|EGF99412.1| hypothetical protein MELLADRAFT_40307 [Melampsora larici-populina
98AG31]
Length = 252
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 84 LLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTA 143
+LF++GLP + T ++ LF+ + G++ +R++ P RTG + FV++D + A
Sbjct: 178 VLFLEGLPAEVTDDMMAVLFQQYPGFQSVRLV---PGRTG-----IGFVQYDTSTQSDMA 229
Query: 144 MDALHGYKF 152
AL G++
Sbjct: 230 KTALDGFQL 238
>gi|346973867|gb|EGY17319.1| multiple RNA-binding domain-containing protein [Verticillium
dahliae VdLs.17]
Length = 866
Score = 40.0 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 70 RNNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVL 129
R + + G+ + V LP + +++E+ LF + R +R+ P++ G
Sbjct: 728 RREDKAKMMAGQRTKIVVKNLPFEISKKELRALFATYGTLRAVRL----PKKMGQSTRGF 783
Query: 130 CFVEFDDPKCARTAMDALH 148
F EF PK A+ A+DAL
Sbjct: 784 AFAEFSTPKEAQNAIDALQ 802
>gi|320580822|gb|EFW95044.1| hypothetical protein HPODL_3416 [Ogataea parapolymorpha DL-1]
Length = 602
Score = 40.0 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM--VLCFVEFDDPKCA 140
N L+V LP D T E+ LF+P G+R + K+ G + +CFVEF+D A
Sbjct: 449 NTLYVGNLPPDATELELRTLFQPQKGFRRLSFRTKQNTGNGSSSHHGPMCFVEFEDVAYA 508
Query: 141 RTAMDALHG 149
A+ L+G
Sbjct: 509 TRALAELYG 517
>gi|307102554|gb|EFN50825.1| hypothetical protein CHLNCDRAFT_28661 [Chlorella variabilis]
Length = 219
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 80 GESNL-LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPK 138
GE N LFV+ LP T + LF+ F G +E+ + +P + F+EF+
Sbjct: 142 GEPNAKLFVENLPAATTAAMLEMLFQQFPGCKEVTTVPAKPG--------IAFIEFETEM 193
Query: 139 CARTAMDALHGYK 151
A AM L G+K
Sbjct: 194 QATVAMTGLQGFK 206
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 40.0 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK-EPRRTGD-RAMVLCFVEFDDPK 138
++ LFV L T + ++ +F+P G+ RV K +P++ G +M F+EF
Sbjct: 612 DTTTLFVRNLNFSTTSQRLTEVFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKS 671
Query: 139 CARTAMDALHGYKFDDKK 156
A+ A+ A+ GY D+ K
Sbjct: 672 QAQAAIKAMDGYTLDNHK 689
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
G+ + +++ LP DC++RE+ F F R+I+ + +++ F+EF D +
Sbjct: 4 GDISRIYIGNLPEDCSQRELEEEFEKFG-----RIIYCDLKKSYS-GSPFAFIEFSDSRD 57
Query: 140 ARTAMDALHGYKFDDKK 156
AR A+ GY+F KK
Sbjct: 58 ARDAIRDKDGYEFHGKK 74
>gi|356501392|ref|XP_003519509.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Glycine max]
Length = 124
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 34/120 (28%)
Query: 73 AGSPLKKGESNL-------LFVDGLPTDCTRREVSHLFRPFVGYREIRV-IHKEPRRTGD 124
A L+KG + L L+V LP + T E+ +F + R+IR+ +K+ R T
Sbjct: 2 AAISLRKGNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGT-- 59
Query: 125 RAMVLCFVEFDDPKCARTAMDALHGY-------------------KFDDKKPDSPTLKIQ 165
FV ++D A+TA+D L G+ KFD KK + ++Q
Sbjct: 60 -----AFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDQKKKEDEIARMQ 114
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 87 VDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDA 146
V LP + TR++V LF F + +RV P++ A FVEF P A AMD
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRV----PKKFDKSARGFAFVEFLLPSEAENAMDQ 771
Query: 147 LHG 149
L G
Sbjct: 772 LQG 774
>gi|198455332|ref|XP_001359948.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
gi|198133199|gb|EAL29100.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E LFV GLP D RE+ LFR + GY + K + G A + FV F A
Sbjct: 525 EVRTLFVSGLPMDAKPRELYLLFRAYEGYEG--SLLKVTSKNGKTASPVGFVTFHTRAGA 582
Query: 141 RTA-MDALHGYKFDDKKPDSP-TLKIQFA 167
A D G +FD PD P T++++FA
Sbjct: 583 EAAKQDLQQGVRFD---PDMPQTIRLEFA 608
>gi|298204782|emb|CBI25280.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E +F+ GLP D RE+ +L R GY +V K G+ M F F P+ A
Sbjct: 48 EVRTIFISGLPEDVKERELQNLLRWLPGYEASQVNFK-----GEHPM--GFALFSTPQLA 100
Query: 141 RTAMDALHGYKFD 153
A DAL FD
Sbjct: 101 VAAKDALQEMVFD 113
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N LF+ L + E+ LF G+++++++ +E R T +CF+EF+D A
Sbjct: 224 NTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQE-RHT------VCFIEFEDMNTATN 276
Query: 143 AMDALHG 149
+L G
Sbjct: 277 VHHSLQG 283
>gi|342882619|gb|EGU83235.1| hypothetical protein FOXB_06235 [Fusarium oxysporum Fo5176]
Length = 454
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
N L+V LP D E+ LF GY+ + R G+ M CFVEF+D A
Sbjct: 297 NTLYVGNLPMDTAEEELKTLFSKQRGYKRLCF-----RTKGNGPM--CFVEFEDIPFASK 349
Query: 143 AMDALHG 149
A+ L+G
Sbjct: 350 ALTELYG 356
>gi|195476890|ref|XP_002100023.1| GE16818 [Drosophila yakuba]
gi|194187547|gb|EDX01131.1| GE16818 [Drosophila yakuba]
Length = 903
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 81 ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
E N +FV L C++ E+ LF PF +++R++HK ++ + +VEF+ P A
Sbjct: 728 EINKIFVRNLHPACSKEELHELFSPFGSIKDVRLVHKLNKQFKG----IAYVEFEKPGEA 783
Query: 141 RTAMDALHGY 150
+ A+ G+
Sbjct: 784 QRAVAGRDGH 793
>gi|448521115|ref|XP_003868429.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis Co 90-125]
gi|380352769|emb|CCG25525.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis]
Length = 819
Score = 40.0 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 72 NAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCF 131
+A +P K +++ + + LP + +R+++ LF F + +RV P++ A F
Sbjct: 685 SATAPSKSAKTSKIIIKNLPFEASRKDLLELFGAFGQLKSVRV----PKKFDQSARGFAF 740
Query: 132 VEFDDPKCARTAMDALHG 149
VEF+ K A AM L G
Sbjct: 741 VEFNLLKEAEDAMKQLEG 758
>gi|147905119|ref|NP_001080695.1| CUGBP Elav-like family member 3-B [Xenopus laevis]
gi|82241483|sp|Q7ZWM3.1|CEL3B_XENLA RecName: Full=CUGBP Elav-like family member 3-B; Short=CELF3-B;
AltName: Full=Bruno-like protein 1-B; AltName:
Full=CUG-BP- and ETR-3-like factor 3-B; AltName:
Full=ELAV-type RNA-binding protein 1-B; Short=ETR-1-B;
AltName: Full=RNA-binding protein BRUNOL-1-B; AltName:
Full=Trinucleotide repeat-containing gene 4 protein B
gi|28422663|gb|AAH46942.1| Tnrc4-prov protein [Xenopus laevis]
Length = 462
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 144
+F+ LP + T E+ +F PF +V R +++ FV FD+P A+ A+
Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVD---RATNQSKCFGFVSFDNPGSAQAAI 435
Query: 145 DALHGYKFDDKKPDSPTLKIQF 166
+++G++ K+ LK+Q
Sbjct: 436 QSMNGFQIGMKR-----LKVQL 452
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 85 LFVDGLPTDCTRREVSHLFRPF--VGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCART 142
+++ LP+D +R++ LF + + Y +I++ P F+EFDDP+ AR
Sbjct: 9 IYIGNLPSDVKQRDLEDLFYKYGRINYIDIKLSRGAP---------FAFIEFDDPRDARD 59
Query: 143 AMDALHGYKFD 153
A+ GY D
Sbjct: 60 AVHGRDGYDMD 70
>gi|401415850|ref|XP_003872420.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488644|emb|CBZ23891.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 665
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 70 RNNAGSPLKKGESNL--LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAM 127
R + G P+ + + LFV +P DCTR ++ LF F R++ +HK+ D AM
Sbjct: 220 RRSEGGPVGEARKKIMKLFVRNVPLDCTRTDLEELFGAFGSVRQV-TLHKDTSPVQDEAM 278
Query: 128 V--LCFVEFDDPKCARTAMDALHGYK 151
V + FV + + A A +H K
Sbjct: 279 VRLIAFVIYTEEGAAARAAREVHNTK 304
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 68 SLRNNAGSPL----KKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTG 123
S R + +P KK S + V LP + R++V LF F + +RV P++
Sbjct: 732 SHRQGSAAPTSGQSKKKSSGKIVVKNLPFEAERKQVFELFSSFGQLKSVRV----PKKFD 787
Query: 124 DRAMVLCFVEFDDPKCARTAMDALHG 149
FVEF PK A AM+ L G
Sbjct: 788 KSTRGFAFVEFLLPKEAENAMEQLQG 813
>gi|19114339|ref|NP_593427.1| RNA-binding protein Mug28 [Schizosaccharomyces pombe 972h-]
gi|74698440|sp|Q9UT83.1|MUG28_SCHPO RecName: Full=Meiotically up-regulated gene 28 protein
gi|5706508|emb|CAB52270.1| RNA-binding protein Mug28 [Schizosaccharomyces pombe]
Length = 609
Score = 40.0 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRA--MVLCFVEFDDPKCART 142
++V LP+ C ++ LF PF + + ++ ++ ++ D + F+ F++ A
Sbjct: 22 IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSADN 81
Query: 143 AMDALHGYKFDDKKPDSPTLKIQFAH 168
A+ +L+G F TLK+++ H
Sbjct: 82 AIASLNGSSFQGN-----TLKVEYTH 102
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 40.0 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 77 LKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDD 136
LKK S + + LP + +++EV LF P+ R +RV P++ + F EF
Sbjct: 701 LKKAASTKILIKNLPFEASKKEVRALFTPYGQLRSVRV----PKKFDSSSRGFGFAEFTT 756
Query: 137 PKCARTAMDAL 147
+ A AM+AL
Sbjct: 757 KRDALNAMNAL 767
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Query: 53 GINPTIPDVINGVPSSLRNNAGSPLKKG------ESNLLFVDGLPTDCTRREVSHLFRPF 106
G+ P +P ++ + + +A L+ ++ LFV L T ++ F+P
Sbjct: 570 GVVPNVPQPVSVGKAGTKLSATDLLEDAPEPETSDTATLFVRNLNFTTTSERLTEAFKPL 629
Query: 107 VGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKFDDKKPDSPTLKIQF 166
G+R +V K + G +M FVEF + + A A+ + G+ + K L+I+
Sbjct: 630 SGFRSAKVKTKIDPKRGVLSMGFGFVEFTNAETATAALRTMDGHDLEGHK-----LQIKA 684
Query: 167 AH 168
+H
Sbjct: 685 SH 686
>gi|431917652|gb|ELK16917.1| CUG-BP- and ETR-3-like factor 2 [Pteropus alecto]
Length = 443
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 85 LFVDGLPTDCTRREVSHLFRPFVGYREIRVI----HKEPRRTGDRAMVLCFVEFDDPKCA 140
+FV +P + +E+ LF P+ +I V+ P+ G CFV F K A
Sbjct: 18 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG-----CCFVTFYTRKAA 72
Query: 141 RTAMDALHGYK 151
A +ALH K
Sbjct: 73 LEAQNALHNIK 83
>gi|24639833|ref|NP_511047.2| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|45554213|ref|NP_996353.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|161077571|ref|NP_001096884.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|59800212|sp|Q9W4D2.1|RNP4F_DROME RecName: Full=RNA-binding protein 4F
gi|7290571|gb|AAF46022.1| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|16769448|gb|AAL28943.1| LD32008p [Drosophila melanogaster]
gi|45446810|gb|AAS65263.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|158031720|gb|ABW09340.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|220947218|gb|ACL86152.1| Rnp4F-PA [synthetic construct]
gi|220956760|gb|ACL90923.1| Rnp4F-PA [synthetic construct]
Length = 941
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 66 PSSLRNNAGSPLKKG--------ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK 117
PS ++ A + K+ E N +FV L C++ E+ LF PF +++R++HK
Sbjct: 699 PSKVKGPANAEAKESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHK 758
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKF 152
++ + +VEF+ P A+ A+ G F
Sbjct: 759 LNKQFKG----IAYVEFEKPGEAQRAVAGRDGCLF 789
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 80 GESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKC 139
GE ++V LP D +EV +F + + I V ++G R F+EF+D +
Sbjct: 5 GEDQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDV------KSG-RGPAFAFIEFEDNRD 57
Query: 140 ARTAMDALHGYKFDDKKPDSPTLKIQF 166
A A+ A GY+FD ++ ++++F
Sbjct: 58 AEDAVRARDGYEFDGRR-----IRVEF 79
>gi|256083949|ref|XP_002578197.1| small nuclear ribonucleoprotein U)1aU)2b [Schistosoma mansoni]
gi|353232716|emb|CCD80071.1| putative small nuclear ribonucleoprotein U)1a,U)2b [Schistosoma
mansoni]
Length = 328
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 82 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 141
+ +LF+ LP D +S LF F GYRE+R++ P R + FVEF + A
Sbjct: 253 NKILFLTNLPDDSDEAMLSMLFGQFTGYREVRMV---PGRHD-----IAFVEFGNEVEAS 304
Query: 142 TAMDALHGYKF 152
A L G+
Sbjct: 305 AAKLGLQGFNI 315
>gi|2582672|emb|CAA75535.1| RNA binding protein [Drosophila melanogaster]
Length = 943
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 66 PSSLRNNAGSPLKKG--------ESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHK 117
PS ++ A + K+ E N +FV L C++ E+ LF PF +++R++HK
Sbjct: 701 PSKVKGPANAEAKESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHK 760
Query: 118 EPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYKF 152
++ + +VEF+ P A+ A+ G F
Sbjct: 761 LNKQFKG----IAYVEFEKPGEAQRAVAGRDGCLF 791
>gi|116193039|ref|XP_001222332.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
gi|88182150|gb|EAQ89618.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
Length = 650
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 83 NLLFVDGLPTDCTRREVSHLFRPFVGYREI--RVIHKEPRRTGDRAMVLCFVEFDDPKCA 140
N L+V LP D + E+ LF GY+ + R P +CFVEF+D A
Sbjct: 465 NTLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNGP---------MCFVEFEDVTFA 515
Query: 141 RTAMDALHG 149
A+ L+G
Sbjct: 516 TKALHDLYG 524
>gi|395827347|ref|XP_003786866.1| PREDICTED: CUGBP Elav-like family member 2 isoform 1 [Otolemur
garnettii]
Length = 521
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 58 IPDVINGVPSSLR---NNAGSPLKKGESNLLFVDGLPTDCTRREVSHLFRPFVGYREIRV 114
+PD ING S + +++ P ++ +FV +P + +E+ LF P+ +I V
Sbjct: 21 VPDRINGTASKMNGALDHSDQP--DPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINV 78
Query: 115 I----HKEPRRTGDRAMVLCFVEFDDPKCARTAMDALHGYK 151
+ P+ G CFV F K A A +ALH K
Sbjct: 79 LRDRSQNPPQSKG-----CCFVTFYTRKAALEAQNALHNIK 114
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.141 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,402,302,986
Number of Sequences: 23463169
Number of extensions: 151503832
Number of successful extensions: 296155
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 1504
Number of HSP's that attempted gapping in prelim test: 294109
Number of HSP's gapped (non-prelim): 2572
length of query: 184
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 51
effective length of database: 9,238,593,890
effective search space: 471168288390
effective search space used: 471168288390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)