BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030013
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2
Length = 330
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Query: 60 KGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQ 119
KG T+ Q+ A + + D +++K F+ FK +KF+ N Y LA GQ
Sbjct: 93 KGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQ 152
Query: 120 APKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE-SGPSETNAALEFAVNSVK 178
+PKFMV AC+DSRVCPS++L FQPGEAF+VRNVANMVPP + + S AA+E+AV +K
Sbjct: 153 SPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLK 212
Query: 179 I 179
+
Sbjct: 213 V 213
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1
Length = 328
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 91 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVR 150
+++K FL FKK+K+ +N Y LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+VR
Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181
Query: 151 NVANMVPPCESGP-SETNAALEFAVNSVKITPV 182
NVAN+VPP + + T AA+E+AV +K++ +
Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNI 214
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1
Length = 330
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 73 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSR 132
Q+ A + + D +++K F+ FK +KF+ N Y LA GQ+PKFMV AC+DSR
Sbjct: 106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSR 165
Query: 133 VCPSNILGFQPGEAFIVRNVANMVPPCE-SGPSETNAALEFAVNSVKI 179
VCPS++L FQPGEAF+VRNVANMVPP + + S AA+E+AV +K+
Sbjct: 166 VCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1
Length = 330
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 73 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSR 132
Q+ A + + D +++K F+ FK +KF+ N Y LA GQ+PKFMV AC+DSR
Sbjct: 106 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSR 165
Query: 133 VCPSNILGFQPGEAFIVRNVANMVPPCE-SGPSETNAALEFAVNSVKI 179
VCPS++L FQPGEAF+VRNVANMVPP + + S AA+E+AV +K+
Sbjct: 166 VCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1
Length = 329
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 73 QVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSR 132
Q+ A + + D +++K F+ FK +KF+ N Y LA GQ+PKFMV AC+DSR
Sbjct: 105 QITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSR 164
Query: 133 VCPSNILGFQPGEAFIVRNVANMVPPCE-SGPSETNAALEFAVNSVKI 179
VCPS++L FQPGEAF+VRNVANMVPP + + S AA+E+AV +K+
Sbjct: 165 VCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 212
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1
PE=1 SV=2
Length = 347
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 88 DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAF 147
D + +K F+ FKK+K+ N Y LA GQ+PK+MV AC+DSRVCPS++L FQPG+AF
Sbjct: 127 DPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAF 186
Query: 148 IVRNVANMVPPCESGP-SETNAALEFAVNSVKI 179
+VRN+ANMVPP + AA+E+AV +K+
Sbjct: 187 VVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKV 219
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 321
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 88 DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAF 147
D + MK F+ FK +K+ +N Y L+ GQ+PKFMV AC+DSRVCPS++L FQPGEAF
Sbjct: 112 DPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAF 171
Query: 148 IVRNVANMVPPCE-SGPSETNAALEFAVNSVKI 179
+VRN+ANMVP + + S AA+E+AV +K+
Sbjct: 172 VVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKV 204
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2
PE=1 SV=2
Length = 259
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 88 DFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAF 147
D +++K F++FKK+K+ N Y LA GQ+PK+MV AC+DSRVCPS++L F PG+AF
Sbjct: 50 DPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAF 109
Query: 148 IVRNVANMVPPCES-GPSETNAALEFAVNSVKITPV 182
+VRN+ANMVPP + + AA+E+AV +K+ +
Sbjct: 110 VVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENI 145
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 319
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 92 KMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRN 151
++K F+ FKK+K+ +N Y L+ GQAPKFMV AC+DSRVCPS++L FQPGEAF+VRN
Sbjct: 114 RIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRN 173
Query: 152 VANMVPPCESGP-SETNAALEFAVNSVKI 179
+ANMVP + + AA+E+AV +K+
Sbjct: 174 IANMVPVFDKDKYAGVGAAIEYAVLHLKV 202
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 324
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 91 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVR 150
+++K F FK + + + + ++ L GQAPK+MV ACADSRVCPS LG +PGEAF +R
Sbjct: 128 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 187
Query: 151 NVANMVPP-CESGPSETNAALEFAVNSVKI 179
N+ANMVP C++ + +A+E+AV ++K+
Sbjct: 188 NIANMVPAYCKNKYAGVGSAIEYAVCALKV 217
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1
Length = 190
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCES-GPSETNAAL 170
Y LA GQ+PKF+V AC+DSRVCPS+IL FQPGEAF+VRN+ANMVPP ++ S AA+
Sbjct: 5 YGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAI 64
Query: 171 EFAVNSVKI 179
E+AV +K+
Sbjct: 65 EYAVLHLKV 73
>sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori (strain J99) GN=cynT PE=3
SV=1
Length = 221
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 98 LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVP 157
L F++ ++ E E Y++L Q P + I+C DSRV P+ I G QPGE +++RN+ N++P
Sbjct: 8 LEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIP 67
Query: 158 PCESGPS--ETNAALEFAVNSVKI 179
P S T A++E+A+ V +
Sbjct: 68 PKTSYKESLSTIASVEYAIAHVGV 91
>sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=cynT PE=3 SV=1
Length = 220
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%)
Query: 97 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
FL F++ + + +++LA QAPK + IAC+DSRV P + +PGE F++RN N+V
Sbjct: 8 FLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIV 67
Query: 157 PPCESGPSETNAALEFAVNSVKITPV 182
P P +A++E+AV + + +
Sbjct: 68 PGYGPQPGGVSASVEYAVAVLGVGDI 93
>sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1
SV=1
Length = 219
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 55/86 (63%)
Query: 97 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
FL F+++ F + ++ LA Q+P+ + I+C+DSR+ P + +PG+ F++RN N+V
Sbjct: 8 FLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIV 67
Query: 157 PPCESGPSETNAALEFAVNSVKITPV 182
P P +A++E+AV +++++ +
Sbjct: 68 PSYGPEPGGVSASVEYAVAALRVSDI 93
>sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1
Length = 219
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 55/86 (63%)
Query: 97 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
FL F+++ F + ++ LA Q+P+ + I+C+DSR+ P + +PG+ F++RN N+V
Sbjct: 8 FLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIV 67
Query: 157 PPCESGPSETNAALEFAVNSVKITPV 182
P P +A++E+AV +++++ +
Sbjct: 68 PSYGPEPGGVSASVEYAVAALRVSDI 93
>sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1805 PE=1
SV=2
Length = 228
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 110 EHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAA 169
E + LA GQ+P+++ I C+DSRV + I+G GE F+ RN+AN+VP + + +
Sbjct: 38 EFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTID---LSSMSV 94
Query: 170 LEFAVNSVKITPVA 183
+ +AV +K+ +
Sbjct: 95 INYAVGHLKVKHIV 108
>sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942)
GN=icfA PE=3 SV=1
Length = 272
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 89 FFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFI 148
+ ++H F+ + + + ++ A GQ P+ + I C+DSR+ P+ I GE F+
Sbjct: 4 LIEGLRH----FRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFV 59
Query: 149 VRNVANMVPPCESGPSETNAALEFAVNSVKITPVA 183
+RN N++PP + A++E+A+ ++ I V
Sbjct: 60 IRNAGNLIPPFGAANGGEGASIEYAIAALNIEHVV 94
>sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=can PE=1 SV=1
Length = 229
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKITPV 182
F+ RNVAN V + + +++AV+ +KI +
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHI 93
>sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=icfA PE=1 SV=1
Length = 274
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%)
Query: 100 FKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPC 159
F++ F + + ++ L+ GQ P+ + I C+DSRV P+ I + G+ F++RN N++PP
Sbjct: 11 FREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPY 70
Query: 160 ESGPSETNAALEFAVNSVKITPV 182
+ AA+E+A+ +++I +
Sbjct: 71 GAANGGEGAAMEYALVALEINQI 93
>sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBP8B7.05c PE=1 SV=2
Length = 328
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 80 AAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNIL 139
A +++ + D ++ R L++ +Q + + D Q P+ + I C+DSRV + IL
Sbjct: 116 AGKIDQNGEIKDLLE-RNLTWSQQTSRKYPSFFTATKDIQTPQVLWIGCSDSRVPETTIL 174
Query: 140 GFQPGEAFIVRNVANMVPPCESGPSETN--AALEFAVNSVKITPV 182
PGE F+ RN+AN+VP S+ N A +E++V +K+ +
Sbjct: 175 NLLPGEVFVHRNIANVVP-----RSDINALAVMEYSVTVLKVKHI 214
>sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN=can PE=3 SV=1
Length = 220
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 70
>sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (strain K12) GN=can PE=1
SV=1
Length = 220
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV 70
>sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NCE103 PE=1 SV=1
Length = 221
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 116 ADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVN 175
A GQ+P + I C+DSR N LG PGE F +NVAN+ C S A LEFA+
Sbjct: 45 AKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANI---CHSEDLTLKATLEFAII 100
Query: 176 SVKITPV 182
+K+ V
Sbjct: 101 CLKVNKV 107
>sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=cynT PE=3 SV=1
Length = 221
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 115 LADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPS--ETNAALEF 172
L Q P + I+C DSRV P+ I G +PGE +++ N+ N+ PP S T A++E+
Sbjct: 25 LKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEY 84
Query: 173 AVNSVKI 179
A+ V +
Sbjct: 85 AIAHVGV 91
>sp|O53573|MTCA2_MYCTU Carbonic anhydrase 2 OS=Mycobacterium tuberculosis GN=mtcA2 PE=1
SV=1
Length = 207
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANM 155
RF++ + Q ++++H LA GQ P ++ CADSRV I G+ F+VR ++
Sbjct: 19 RFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHV 78
Query: 156 VPPCESGPSETNAALEFAVNSVKI 179
+ G ++E+AV + +
Sbjct: 79 IDSAVLG------SIEYAVTVLNV 96
>sp|A8XKV0|BCA1_CAEBR Beta carbonic anhydrase 1 OS=Caenorhabditis briggsae GN=bca-1 PE=3
SV=2
Length = 270
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 109 LEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVP--PCESGPSET 166
++ +++++D P ++ C DSR+ P+ G+ F+VRN NM+P P SE
Sbjct: 20 VKQFEHVSDHPNPTAVMFTCMDSRMLPTRFTQSAVGDMFVVRNAGNMIPAAPNYGSYSEV 79
Query: 167 N-----AALEFAVNSVKITPVA 183
+ AALE AV KI V
Sbjct: 80 SINTEPAALELAVKRGKIRHVV 101
>sp|Q22460|BCA1_CAEEL Beta carbonic anhydrase 1 OS=Caenorhabditis elegans GN=bca-1 PE=3
SV=1
Length = 270
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 90 FDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIV 149
+K+ + F+ + ++ ++ + + +P ++ C DSR+ P+ Q G+ F+V
Sbjct: 1 MNKILRGVIQFRNTIRKDLVKQFEEIKNNPSPTAVMFTCMDSRMLPTRFTQSQVGDMFVV 60
Query: 150 RNVANMVP--PCESGPSETN-----AALEFAV 174
RN NM+P P SE + AALE AV
Sbjct: 61 RNAGNMIPDAPNYGAFSEVSVNTEPAALELAV 92
>sp|A0R566|CYNT_MYCS2 Carbonic anhydrase OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=cynT PE=1 SV=1
Length = 206
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANM 155
RF++ + + +E +L Q P +V C DSRV + G+ F+VR ++
Sbjct: 19 RFVAGQPLHPSQGIERRASLTQAQRPTAVVFGCGDSRVAAEILFDQGLGDMFVVRTAGHV 78
Query: 156 VPPCESGPSETNAALEFAVNSVKI 179
+ G ++E+AV +K+
Sbjct: 79 IDNAVLG------SIEYAVTVLKV 96
>sp|P64798|Y1315_MYCBO Uncharacterized protein Mb1315 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb1315 PE=4 SV=1
Length = 163
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 125 VIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++AC D+R+ +LG + GEA ++RN +V
Sbjct: 32 IVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 63
>sp|P64797|MTCA1_MYCTU Beta-carbonic anhydrase 1 OS=Mycobacterium tuberculosis GN=mtcA1
PE=1 SV=1
Length = 163
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 125 VIACADSRVCPSNILGFQPGEAFIVRNVANMV 156
++AC D+R+ +LG + GEA ++RN +V
Sbjct: 32 IVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 63
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,093,687
Number of Sequences: 539616
Number of extensions: 2216045
Number of successful extensions: 5378
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5344
Number of HSP's gapped (non-prelim): 38
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)