Query 030013
Match_columns 184
No_of_seqs 193 out of 1140
Neff 4.9
Searched_HMMs 46136
Date Fri Mar 29 07:09:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030013.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030013hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03006 carbonate dehydratase 100.0 1.2E-46 2.7E-51 331.2 10.4 174 1-184 2-176 (301)
2 PLN03014 carbonic anhydrase 100.0 2E-40 4.3E-45 296.1 11.0 141 40-184 83-224 (347)
3 PLN03019 carbonic anhydrase 100.0 3.6E-40 7.8E-45 292.9 10.2 141 40-184 78-219 (330)
4 PLN00416 carbonate dehydratase 100.0 2.2E-37 4.9E-42 267.8 10.6 138 40-184 6-144 (258)
5 COG0288 CynT Carbonic anhydras 100.0 6.9E-31 1.5E-35 220.8 8.4 94 88-184 2-96 (207)
6 PLN02154 carbonic anhydrase 100.0 1.8E-30 3.9E-35 227.8 10.4 114 67-184 57-170 (290)
7 PRK15219 carbonic anhydrase; P 100.0 3.9E-30 8.4E-35 221.3 9.0 94 84-184 51-147 (245)
8 cd00883 beta_CA_cladeA Carboni 100.0 2.7E-30 5.9E-35 212.4 7.2 85 97-184 1-85 (182)
9 PRK10437 carbonic anhydrase; P 100.0 7.5E-30 1.6E-34 216.6 8.6 93 89-184 3-95 (220)
10 cd00884 beta_CA_cladeB Carboni 100.0 1.2E-29 2.6E-34 210.6 7.0 89 96-184 1-91 (190)
11 cd03378 beta_CA_cladeC Carboni 100.0 1.3E-28 2.7E-33 199.1 8.4 93 86-184 1-96 (154)
12 KOG1578 Predicted carbonic anh 99.9 6.5E-26 1.4E-30 197.0 3.3 125 43-184 33-158 (276)
13 cd00382 beta_CA Carbonic anhyd 99.9 1.8E-23 3.9E-28 161.6 5.9 63 119-184 1-63 (119)
14 PF00484 Pro_CA: Carbonic anhy 99.8 1E-21 2.2E-26 154.9 3.8 59 123-184 1-59 (153)
15 cd03379 beta_CA_cladeD Carboni 99.8 3.2E-21 7E-26 152.7 5.3 60 119-184 1-60 (142)
16 KOG1578 Predicted carbonic anh 96.1 6.5E-05 1.4E-09 66.3 -8.3 88 93-183 3-112 (276)
17 TIGR02742 TrbC_Ftype type-F co 35.8 89 0.0019 24.8 4.9 54 106-177 58-111 (130)
18 KOG2882 p-Nitrophenyl phosphat 27.0 87 0.0019 28.5 3.9 48 110-176 169-217 (306)
19 PF04019 DUF359: Protein of un 23.1 2E+02 0.0043 22.5 4.8 55 115-176 6-60 (121)
20 KOG4780 Uncharacterized conser 20.0 46 0.001 31.8 0.8 33 127-159 390-422 (467)
No 1
>PLN03006 carbonate dehydratase
Probab=100.00 E-value=1.2e-46 Score=331.15 Aligned_cols=174 Identities=49% Similarity=0.796 Sum_probs=152.4
Q ss_pred CCcCCCCccccCCCCCCCCCCCCCCCccceeCCCccccccchhhhhhhhhhhhc-cCccccccccchhhhHHhhcccccc
Q 030013 1 MAILAPASVSKDPLPSSSSALTPLRSSTQIFGPKFKFRQIGQTQLSLSTSFKKS-SGFKLKGWRHSEGITQEFQVDKLET 79 (184)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~~~~~~-~~~~~~a~~~~~~~t~el~~~~~~~ 79 (184)
+|+|+++|||+|||+|+|+. +.+.....+|..+ ...|+++|...+|++ .+|+.+|++|++++|+||+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~- 74 (301)
T PLN03006 2 AATPTHFSVSHDPFSSTSLL--NLQTQAIFGPNHS----LKTTQLRIPASFRRKATNLQVMASGKTPGLTQEANGVAID- 74 (301)
T ss_pred CCCCCCcccccCCcchhhhh--ccCcceeecCCcc----cceeEecccccccccccchhhhhhhchHHHHHHHhhccCC-
Confidence 47899999999999999996 2233344445544 667889999988775 589999999999999999865322
Q ss_pred ccccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCC
Q 030013 80 AAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPC 159 (184)
Q Consensus 80 ~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~ 159 (184)
..++.+.+++|++||.+|+..++.+++++|++|++||+|+++||+||||||+|+.|||++|||+||+||+||+|+|+
T Consensus 75 ---~~~~~~~~~~L~~rf~~f~~~~~~~~~~~~~~La~GQ~P~~lvI~CsDSRV~Pe~Ifd~~pGDlFVVRNaGNiVpp~ 151 (301)
T PLN03006 75 ---RQNNTDVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVIACADSRVCPSAVLGFQPGDAFTVRNIANLVPPY 151 (301)
T ss_pred ---CCCcccHHHHHHHHHHhchhhccccCHHHHHHhccCCCCCEEEEEeccCCCCHHHHhCCCCCCEEEEeccccccCCc
Confidence 23478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHhcCCCcccC
Q 030013 160 ESGPSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 160 d~~~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
|.+..++.++|||||.+|||++|||
T Consensus 152 d~~~~~~~aSLEYAV~~L~V~~IVV 176 (301)
T PLN03006 152 ESGPTETKAALEFSVNTLNVENILV 176 (301)
T ss_pred cccccchhhhHHHHHHHhCCCEEEE
Confidence 8655679999999999999999986
No 2
>PLN03014 carbonic anhydrase
Probab=100.00 E-value=2e-40 Score=296.05 Aligned_cols=141 Identities=38% Similarity=0.629 Sum_probs=129.6
Q ss_pred cchhhhhhhhhhhhccCccccccccchhhhHHhhccccccccccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCC
Q 030013 40 IGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQ 119 (184)
Q Consensus 40 ~~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~el~~~~~~~~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ 119 (184)
.++++.+|+|||+||.+|+.+|++|++++|+||+..... ...+++++++|++||++|+.+.+.+++++|+++++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~lerL~~GN~rF~~~~~~~~~~~~~~La~GQ 158 (347)
T PLN03014 83 YDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSS----DKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQ 158 (347)
T ss_pred HHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCC----CCCCcCHHHHHHHHHHHHHhhccccCHHHHHhhccCC
Confidence 688999999999999999999999999999999964211 2456899999999999999999889999999999999
Q ss_pred CCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCC-cchhHHHHHHHHhcCCCcccC
Q 030013 120 APKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 120 ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~-~sv~aSLEYAV~~LgV~~IV~ 184 (184)
+|+++||+||||||+|+.|||++|||+||+||+||+|+++|... +++.++|||||.+|||++|||
T Consensus 159 ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~V~~IVV 224 (347)
T PLN03014 159 SPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVV 224 (347)
T ss_pred CCCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999987533 468999999999999999986
No 3
>PLN03019 carbonic anhydrase
Probab=100.00 E-value=3.6e-40 Score=292.93 Aligned_cols=141 Identities=38% Similarity=0.625 Sum_probs=130.2
Q ss_pred cchhhhhhhhhhhhccCccccccccchhhhHHhhccccccccccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCC
Q 030013 40 IGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQ 119 (184)
Q Consensus 40 ~~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~el~~~~~~~~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ 119 (184)
.++++.+|+|||+||.+|+.+|++|++++|+||++.... ...+++++++|++||++|+.+.+.+++++|+++++||
T Consensus 78 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~ale~Ll~GN~rF~~~~~~~~p~~~~~La~gQ 153 (330)
T PLN03019 78 YEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSS----DSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQ 153 (330)
T ss_pred HHHHHHHHHhhcccccccchHHHHHHHHhhHHhhhccCC----CCchhHHHHHHHHHHHHHHhccccccHHHHHhhccCC
Confidence 688999999999999999999999999999999974321 2457999999999999999998889999999999999
Q ss_pred CCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCC-cchhHHHHHHHHhcCCCcccC
Q 030013 120 APKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 120 ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~-~sv~aSLEYAV~~LgV~~IV~ 184 (184)
+|+++||+||||||+|+.|||++|||+||+||+||+|+++|... +++.++|||||.+|||++|||
T Consensus 154 ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~p~d~~~~~~v~aSIEYAV~~L~V~~IVV 219 (330)
T PLN03019 154 SPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVV 219 (330)
T ss_pred CCCEEEEEecccCCCHHHHhCCCCCceEEEeccccccCCcccccccccchhHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999987533 578999999999999999986
No 4
>PLN00416 carbonate dehydratase
Probab=100.00 E-value=2.2e-37 Score=267.77 Aligned_cols=138 Identities=37% Similarity=0.626 Sum_probs=129.1
Q ss_pred cchhhhhhhhhhhhccCccccccccchhhhHHhhccccccccccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCC
Q 030013 40 IGQTQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQ 119 (184)
Q Consensus 40 ~~~t~~~l~~~~~~~~~~~~~a~~~~~~~t~el~~~~~~~~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ 119 (184)
.++...+|.++|+.+..++.+++.+...++++|++.. .+|.+++++|++||+||+.+.+.+++++|+.++.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~al~~Ll~Gn~rF~~~~~~~~~~~~~~la~gQ 78 (258)
T PLN00416 6 YEAAIKGLNDLLSTKADLGNVAAAKIKALTAELKELD-------SSNSDAIERIKTGFTQFKTEKYLKNSTLFNHLAKTQ 78 (258)
T ss_pred HHHHHHHHHhhcccccccchHHHHhHHHHHHHHHHhh-------cCHHHHHHHHHHHHHHHHhcccccCHHHHHhhccCC
Confidence 5788899999999999999999999999999999974 568999999999999999998888899999999999
Q ss_pred CCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCC-cchhHHHHHHHHhcCCCcccC
Q 030013 120 APKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 120 ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~-~sv~aSLEYAV~~LgV~~IV~ 184 (184)
+|+++||+||||||+|+.|||.+|||+||+||+||+|+++|... +++.++|||||.+|||++|||
T Consensus 79 ~P~alvI~CsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~~~~~asLEyAv~~L~V~~IVV 144 (258)
T PLN00416 79 TPKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPFDQKRHSGVGAAVEYAVVHLKVENILV 144 (258)
T ss_pred CCCEEEEEecCCCCCHHHHcCCCCCCEEEEeccccccCCccccccccchhHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999987532 468999999999999999986
No 5
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=99.97 E-value=6.9e-31 Score=220.84 Aligned_cols=94 Identities=32% Similarity=0.555 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhhhhhcccChHHHHhhh-cCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcch
Q 030013 88 DFFDKMKHRFLSFKKQKFMENLEHYQNLA-DGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSET 166 (184)
Q Consensus 88 ~~l~~Ll~GN~rF~~~~~~~~~~~~~~La-~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv 166 (184)
..+++|++||++|.++.+..++.+|+.++ ++|+|+++|||||||||+||.+||++|||+||+||+||+|++++ .++
T Consensus 2 ~~~~~ll~gn~~f~~~~~~~~~~~~~~l~~~~Q~P~~lii~C~DSRv~~e~i~~~~pGdlfV~RNaGniV~~~~---~~~ 78 (207)
T COG0288 2 SALKDLLAGNQRFAEGKFPEQSALFRKLADKGQSPKALIITCSDSRVPPELITGLGPGDLFVIRNAGNIVTHPD---GSV 78 (207)
T ss_pred cHHHHHHHHHHHHHhcccccchHHHHHHhccCCCCcEEEEEEccCCCCHHHHhCCCCccEEEEeecccccCCCc---cch
Confidence 47899999999999998888899998876 56999999999999999999999999999999999999999876 379
Q ss_pred hHHHHHHHHhcCCCcccC
Q 030013 167 NAALEFAVNSVKITPVAG 184 (184)
Q Consensus 167 ~aSLEYAV~~LgV~~IV~ 184 (184)
++||||||.+|||++|||
T Consensus 79 l~sleyAv~~L~v~~IiV 96 (207)
T COG0288 79 LRSLEYAVYVLGVKEIIV 96 (207)
T ss_pred hHHHHHHHHHcCCCEEEE
Confidence 999999999999999986
No 6
>PLN02154 carbonic anhydrase
Probab=99.97 E-value=1.8e-30 Score=227.83 Aligned_cols=114 Identities=55% Similarity=0.970 Sum_probs=101.6
Q ss_pred hhhHHhhccccccccccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCce
Q 030013 67 GITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146 (184)
Q Consensus 67 ~~t~el~~~~~~~~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDl 146 (184)
+.+.+|+.... +.....+.|++|++||++|+.+++.+++++|++|+.||+|+++||+||||||+|+.|||++|||+
T Consensus 57 ~~~~~~~~~~~----~~~~~~~~l~~Ll~gf~~f~~~~~~~~~e~f~~La~GQ~P~~lvi~C~DSRV~pe~if~~~pGdl 132 (290)
T PLN02154 57 GIREEFMDLNR----ETETSYDFLDEMRHRFLKFKRQKYLPEIEKFKALAIAQSPKVMVIGCADSRVCPSYVLGFQPGEA 132 (290)
T ss_pred hhhHHHHhccc----CcchhHHHHHHHHHHHHHHhhccccccHHHHHHhccCCCCCEEEEEecCCCCCHHHHcCCCCCCE
Confidence 44556655432 23556789999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCcchhHHHHHHHHhcCCCcccC
Q 030013 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 147 FVvRNaGNiV~~~d~~~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
||+||+||+|++++.+..++.++|||||.+|||++|||
T Consensus 133 FvvRN~GNiv~~~~~g~~~~~aslEyAv~~L~v~~IvV 170 (290)
T PLN02154 133 FTIRNVANLVTPVQNGPTETNSALEFAVTTLQVENIIV 170 (290)
T ss_pred EEEeccCCccCCccCCccchhhHHHHHHHHhCCCEEEE
Confidence 99999999999987655689999999999999999986
No 7
>PRK15219 carbonic anhydrase; Provisional
Probab=99.96 E-value=3.9e-30 Score=221.26 Aligned_cols=94 Identities=23% Similarity=0.285 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHHhhhhhcccChHHH---HhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCC
Q 030013 84 ENECDFFDKMKHRFLSFKKQKFMENLEHY---QNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCE 160 (184)
Q Consensus 84 ~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~---~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d 160 (184)
.+|.+++++|++||+||+++.+. +++++ .++++||+|+++||+|||||||||.|||.+|||+||+||+||+|++
T Consensus 51 ~~p~~al~~L~~GN~rF~~~~~~-~~~~~~~~~~la~gQ~P~a~vi~CsDSRV~pe~ifd~~~GdlFvvRnaGN~v~~-- 127 (245)
T PRK15219 51 MTPDQIIESLKQGNKRFRSGKPA-QHDYLAQKRASAAGQYPAAVILSCIDSRAPAEIILDTGIGETFNSRVAGNISND-- 127 (245)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcC-CchhhHHhhhhccCCCCeEEEEecccCCCCHHHHhCCCCCcEEEEeccccccCc--
Confidence 57899999999999999998764 34333 3467999999999999999999999999999999999999999976
Q ss_pred CCCcchhHHHHHHHHhcCCCcccC
Q 030013 161 SGPSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 161 ~~~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
++.+||||||.+|||++|||
T Consensus 128 ----~~~~slEyAv~~L~v~~IvV 147 (245)
T PRK15219 128 ----DLLGSMEFACAVAGAKVVLV 147 (245)
T ss_pred ----chhhHHHHHHHHcCCCEEEE
Confidence 37899999999999999986
No 8
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.96 E-value=2.7e-30 Score=212.35 Aligned_cols=85 Identities=34% Similarity=0.653 Sum_probs=81.0
Q ss_pred HHHhhhhhcccChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHh
Q 030013 97 FLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNS 176 (184)
Q Consensus 97 N~rF~~~~~~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~ 176 (184)
|++|+...+.+++++|++++++|+|+++|||||||||+|+.|||.+|||+||+||+||+|++++. ++.+||||||.+
T Consensus 1 n~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~CsDSRv~pe~if~~~~GdlFViRnaGN~v~~~~~---~~~asleyAv~~ 77 (182)
T cd00883 1 NRAWAEEKKAKDPDFFPRLAKGQTPEYLWIGCSDSRVPENTILGLLPGEVFVHRNIANLVSPTDL---NCLSVLQYAVDV 77 (182)
T ss_pred ChhhhhhccccCHHHHHHhhcCCCCCEEEEEecCCCCCHHHhcCCCCCCEEEEEeeccccCCCCc---chhhhHHHHHHh
Confidence 67899988889999999999999999999999999999999999999999999999999999764 799999999999
Q ss_pred cCCCcccC
Q 030013 177 VKITPVAG 184 (184)
Q Consensus 177 LgV~~IV~ 184 (184)
|||++|||
T Consensus 78 L~v~~IvV 85 (182)
T cd00883 78 LKVKHIIV 85 (182)
T ss_pred cCCCEEEE
Confidence 99999986
No 9
>PRK10437 carbonic anhydrase; Provisional
Probab=99.96 E-value=7.5e-30 Score=216.56 Aligned_cols=93 Identities=29% Similarity=0.500 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhH
Q 030013 89 FFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNA 168 (184)
Q Consensus 89 ~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~a 168 (184)
.+++|++||++|+...+..++++|++++++|+|+++|||||||||+|+.|||.+|||+||+||+||+|++.|. ++.+
T Consensus 3 ~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~~q~p~~~~i~C~DSRv~p~~i~~~~~Gd~fv~Rn~gn~v~~~~~---~~~~ 79 (220)
T PRK10437 3 DIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDL---NCLS 79 (220)
T ss_pred hHHHHHHHHHHHHHhhhccChHHHHhcccCCCCCEEEEEecccCCCHHHhcCCCCCcEEEEeecccccCCCCc---chHH
Confidence 5789999999999988888999999999999999999999999999999999999999999999999998764 6899
Q ss_pred HHHHHHHhcCCCcccC
Q 030013 169 ALEFAVNSVKITPVAG 184 (184)
Q Consensus 169 SLEYAV~~LgV~~IV~ 184 (184)
+|||||.+|||++|||
T Consensus 80 ~leyAV~~L~v~~IvV 95 (220)
T PRK10437 80 VVQYAVDVLEVEHIII 95 (220)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 9999999999999986
No 10
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.96 E-value=1.2e-29 Score=210.57 Aligned_cols=89 Identities=48% Similarity=0.775 Sum_probs=82.9
Q ss_pred HHHHhhhhhcccChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCC--CCcchhHHHHHH
Q 030013 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCES--GPSETNAALEFA 173 (184)
Q Consensus 96 GN~rF~~~~~~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~--~~~sv~aSLEYA 173 (184)
||++|++..+.+++++|+++++||+|+++||+||||||+|+.||+.+|||+||+||+||+|++++. ...++.++||||
T Consensus 1 G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~~i~C~DsRv~~~~i~~~~~Gd~fv~Rn~gn~v~~~~~~~~~~~~~asleya 80 (190)
T cd00884 1 GFRRFRKEYFPEERELFEKLAKGQSPKALFIACSDSRVVPALITQTQPGELFVVRNVGNLVPPYEPDGGFHGTSAAIEYA 80 (190)
T ss_pred ChHHHHhhhhhhhHHHHHHhccCCCCCeEEEeeeCCCCCHHHHcCCCCCCEEEEeccCCcCCcccccccccchhhhHHHH
Confidence 789999988888999999999999999999999999999999999999999999999999999754 235799999999
Q ss_pred HHhcCCCcccC
Q 030013 174 VNSVKITPVAG 184 (184)
Q Consensus 174 V~~LgV~~IV~ 184 (184)
|.+|||++|||
T Consensus 81 v~~l~v~~ivV 91 (190)
T cd00884 81 VAVLKVEHIVV 91 (190)
T ss_pred HHHhCCCEEEE
Confidence 99999999986
No 11
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.95 E-value=1.3e-28 Score=199.10 Aligned_cols=93 Identities=29% Similarity=0.468 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcc---cChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCC
Q 030013 86 ECDFFDKMKHRFLSFKKQKFM---ENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESG 162 (184)
Q Consensus 86 ~~~~l~~Ll~GN~rF~~~~~~---~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~ 162 (184)
|.+++++|++||++|.++... ..++.|.+++++|+|+++||||||||++|+.+|+.+|||+||+||+||++++
T Consensus 1 p~~~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fviRn~gn~v~~---- 76 (154)
T cd03378 1 PDEALERLKEGNKRFVSGKPLHPDQDLARRRELAKGQKPFAVILSCSDSRVPPEIIFDQGLGDLFVVRVAGNIVDD---- 76 (154)
T ss_pred ChHHHHHHHHHHHHHHhcCccCccccHHHHHHhccCCCCcEEEEEcCCCCCCHHHHcCCCCCCEEEEeccccccCh----
Confidence 457899999999999987542 1256688999999999999999999999999999999999999999999987
Q ss_pred CcchhHHHHHHHHhcCCCcccC
Q 030013 163 PSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 163 ~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
++.++||||+.+|||++|||
T Consensus 77 --~~~~sl~yav~~l~v~~IvV 96 (154)
T cd03378 77 --DVLGSLEYAVEVLGVPLVVV 96 (154)
T ss_pred --hHHHHHHHHHHHhCCCEEEE
Confidence 47999999999999999986
No 12
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=99.92 E-value=6.5e-26 Score=197.04 Aligned_cols=125 Identities=30% Similarity=0.490 Sum_probs=113.2
Q ss_pred hhhhhhhhhhhccCccccccccchhhhHHhhccccccccccCCHHHHHHHHHHHHHHhhhhhcccChHHHHhhhcCCCCc
Q 030013 43 TQLSLSTSFKKSSGFKLKGWRHSEGITQEFQVDKLETAAEVENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPK 122 (184)
Q Consensus 43 t~~~l~~~~~~~~~~~~~a~~~~~~~t~el~~~~~~~~~~~~~~~~~l~~Ll~GN~rF~~~~~~~~~~~~~~La~gQ~P~ 122 (184)
..-.+.++|.++.++ +|++++.++|++ .+.+++++++|..|..+++..+|..|..++++|+|+
T Consensus 33 ~~~~dsrml~~r~~~--~~~~~~~~~~~~---------------~~~~~~i~~~Fv~~~~~~~~~~p~~f~~~~~~qsp~ 95 (276)
T KOG1578|consen 33 FTCMDSRMLPTRYNL--VAAAKIKKLTAE---------------FDTLEDIGDMFVVRNSGNYIPNPTLFGALAKSQSPE 95 (276)
T ss_pred HHHHHhhccchhhhh--hhhhhhhhhhhc---------------cchHHHHHhhHhhhccccCCCChhhhHHHhccCCCc
Confidence 344566777777777 899999999983 358899999999999999999999999999999999
Q ss_pred EEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCC-cchhHHHHHHHHhcCCCcccC
Q 030013 123 FMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGP-SETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 123 ~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~-~sv~aSLEYAV~~LgV~~IV~ 184 (184)
.+||+|+||||+|++|++++|||.|++||++|+++|.|..+ .++.|+|||||.+|||++|++
T Consensus 96 ~l~i~csdsRv~~shIL~~~pge~f~irniaNlv~p~~~~~~~~~~AalE~aV~~lkvenIiv 158 (276)
T KOG1578|consen 96 PLALECSDSRVCISHILVCGPGECFAIRNIANLVPPPDKSKPTNVGAALEYAVTTLKVENIIV 158 (276)
T ss_pred ceEEEeccccCCCceEEEecCchHhHHHHHHhccCcccccCcccccchHHHHHHHhccceEEE
Confidence 99999999999999999999999999999999999987654 788999999999999999975
No 13
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.88 E-value=1.8e-23 Score=161.56 Aligned_cols=63 Identities=43% Similarity=0.799 Sum_probs=60.0
Q ss_pred CCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHhcCCCcccC
Q 030013 119 QAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 119 Q~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
|+|+++||||||||++|+.+||++|||+||+||+||++++.+. ++.+|||||+.+|||++|||
T Consensus 1 q~p~~~vltC~DsRv~~~~~~~~~~Gd~fv~Rn~Gn~v~~~~~---~~~~sl~~av~~l~v~~ivV 63 (119)
T cd00382 1 QKPKALIIGCSDSRVPPELIFGLGPGDLFVVRNAGNLVPPYDL---DVLASLEYAVEVLGVKHIIV 63 (119)
T ss_pred CCCeEEEEEeeCCCCCHHHHhCCCCCCEEEEeccCCcCCCCcc---cHHHHHHHHHHhhCCCEEEE
Confidence 7999999999999999999999999999999999999998763 79999999999999999985
No 14
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=99.84 E-value=1e-21 Score=154.94 Aligned_cols=59 Identities=41% Similarity=0.775 Sum_probs=50.4
Q ss_pred EEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHhcCCCcccC
Q 030013 123 FMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 123 ~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
++||+|||||++|+.+|+.+|||+||+||+||++++.+ .++.++||||+.+|||++|||
T Consensus 1 a~vi~C~DsR~~~~~~~~~~~Gd~fviRnaGn~v~~~~---~~~~~sle~av~~l~v~~IiV 59 (153)
T PF00484_consen 1 ALVITCSDSRVPPEEIFGLKPGDLFVIRNAGNRVPPPD---DSALASLEYAVYHLGVKEIIV 59 (153)
T ss_dssp EEEEEETTTTSTHHHHHTS-TTSEEEEEETTG---TT----HHHHHHHHHHHHTST-SEEEE
T ss_pred CEEEEEcCCCCCHHHHhCCCCcceeeeeEEeeecCccc---cchhhheeeeeecCCCCEEEE
Confidence 58999999999999999999999999999999999875 379999999999999999986
No 15
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.83 E-value=3.2e-21 Score=152.75 Aligned_cols=60 Identities=25% Similarity=0.445 Sum_probs=56.7
Q ss_pred CCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHhcCCCcccC
Q 030013 119 QAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKITPVAG 184 (184)
Q Consensus 119 Q~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~LgV~~IV~ 184 (184)
++++++||+|||||++|+.+||.+|||+||+||+||+|++ ++++|||||+.+||+++|+|
T Consensus 1 ~~~~~~vitC~DsRv~~e~i~~~~~GdlfviRnaGn~V~~------~~~~sl~~av~~l~~~~IiV 60 (142)
T cd03379 1 PARKLAIVTCMDARLDPEKALGLKLGDAKVIRNAGGRVTD------DAIRSLVVSVYLLGTREIIV 60 (142)
T ss_pred CCceEEEEEEeCCCCCHHHHcCCCCCcEEEEeccCCccCH------hHHHHHHHHHHHhCCCEEEE
Confidence 4689999999999999999999999999999999999997 37999999999999999985
No 16
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=96.14 E-value=6.5e-05 Score=66.33 Aligned_cols=88 Identities=24% Similarity=0.347 Sum_probs=64.3
Q ss_pred HHHHHHHhhhhhcccChHHHHhhhcCCCCcEEEEeecCCCCCcccc----------------cCCCCCceEEEeecCCCC
Q 030013 93 MKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNI----------------LGFQPGEAFIVRNVANMV 156 (184)
Q Consensus 93 Ll~GN~rF~~~~~~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~I----------------f~~~pGDlFVvRNaGNiV 156 (184)
|+.|..+|+..... +.-.++..-++|.+.+++|+|||.-|..- +..+.||.|++||.||..
T Consensus 3 i~~~~~~~~~t~~~---~~~~~~~~mp~~~~~~~~~~dsrml~~r~~~~~~~~~~~~~~~~~~~~~i~~~Fv~~~~~~~~ 79 (276)
T KOG1578|consen 3 ILRGVIRFRNTTRK---DLVEEIRDMPSPTAVMFTCMDSRMLPTRYNLVAAAKIKKLTAEFDTLEDIGDMFVVRNSGNYI 79 (276)
T ss_pred cccccchhhhhhHH---HhHHHHHhCCCHHHHHHHHHHhhccchhhhhhhhhhhhhhhhccchHHHHHhhHhhhccccCC
Confidence 66777888876543 22356677789999999999999999776 666889999999999999
Q ss_pred CCCCCCC------cchhHHHHHHHHhcCCCccc
Q 030013 157 PPCESGP------SETNAALEFAVNSVKITPVA 183 (184)
Q Consensus 157 ~~~d~~~------~sv~aSLEYAV~~LgV~~IV 183 (184)
+.....+ +--.++|+-|+..-...||+
T Consensus 80 ~~p~~f~~~~~~qsp~~l~i~csdsRv~~shIL 112 (276)
T KOG1578|consen 80 PNPTLFGALAKSQSPEPLALECSDSRVCISHIL 112 (276)
T ss_pred CChhhhHHHhccCCCcceEEEeccccCCCceEE
Confidence 9853321 22234566666666666665
No 17
>TIGR02742 TrbC_Ftype type-F conjugative transfer system pilin assembly protein TrbC. This protein is an essential component of the F-type conjugative pilus assembly system for the transfer of plasmid DNA. The N-terminal portion of these proteins are heterogeneous and are not covered by this model.
Probab=35.84 E-value=89 Score=24.75 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=33.1
Q ss_pred ccChHHHHhhhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHhc
Q 030013 106 MENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSV 177 (184)
Q Consensus 106 ~~~~~~~~~La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~L 177 (184)
.-+|..|++..-.+-| ++|+.|.+..+..+.. ..+++-. +..||+ +|+||++.+
T Consensus 58 ~IdP~lF~~f~I~~VP-a~V~~~~~~~c~~~~~--~~~~~~d--~v~Gdv-------------sl~~ALe~i 111 (130)
T TIGR02742 58 QIDPQWFKQFDITAVP-AFVVVKDGLACLPEQP--CPESDYD--VVYGNV-------------SLKGALEKM 111 (130)
T ss_pred EEChHHHhhcCceEcC-EEEEECCCCcccccCC--CCCCCee--EEEecc-------------cHHHHHHHH
Confidence 4589999988776677 4566676664444433 2444433 334554 677777654
No 18
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.99 E-value=87 Score=28.55 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=31.2
Q ss_pred HHHHhhhcCCCCcEEEE-eecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHh
Q 030013 110 EHYQNLADGQAPKFMVI-ACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNS 176 (184)
Q Consensus 110 ~~~~~La~gQ~P~~lvI-tCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~ 176 (184)
++...+..-|.|.++++ ||.|++.||. +|+..|. .++..++|+.+...
T Consensus 169 KL~kA~~yLqnP~clflatn~D~~~p~~----------------~~~~ipG---~G~~v~av~~~t~R 217 (306)
T KOG2882|consen 169 KLMKALNYLQNPGCLFLATNRDATTPPT----------------PGVEIPG---AGSFVAAVKFATGR 217 (306)
T ss_pred HHHHHHHHhCCCCcEEEeccCccccCCC----------------CCeeccC---CccHHHHHHHHhcC
Confidence 34445556789988877 7888888854 2333332 14678888887653
No 19
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=23.15 E-value=2e+02 Score=22.52 Aligned_cols=55 Identities=18% Similarity=0.183 Sum_probs=45.3
Q ss_pred hhcCCCCcEEEEeecCCCCCcccccCCCCCceEEEeecCCCCCCCCCCCcchhHHHHHHHHh
Q 030013 115 LADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNS 176 (184)
Q Consensus 115 La~gQ~P~~lvItCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~sv~aSLEYAV~~ 176 (184)
+..|-.|++.+|-+=--|-+...... .....+.++|..+.+.. +...+|.+|+..
T Consensus 6 l~~g~~P~laIvD~kTkR~~~~~~~~-~~~~~i~v~NPpG~It~------el~~ai~~a~~~ 60 (121)
T PF04019_consen 6 LEAGIIPDLAIVDGKTKREPVVEEVR-KFYRVIEVKNPPGTITE------ELIEAIKKALES 60 (121)
T ss_pred HhCCCCCCEEEEeCcccccCCccccc-CCceEEEEECCCCcccH------HHHHHHHHHHhC
Confidence 45678999999999999988766555 67889999999999887 478899999755
No 20
>KOG4780 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.04 E-value=46 Score=31.81 Aligned_cols=33 Identities=27% Similarity=0.078 Sum_probs=30.9
Q ss_pred eecCCCCCcccccCCCCCceEEEeecCCCCCCC
Q 030013 127 ACADSRVCPSNILGFQPGEAFIVRNVANMVPPC 159 (184)
Q Consensus 127 tCsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~ 159 (184)
.-.|||.+...+.+-..||+--+||.+|.+.|-
T Consensus 390 s~~~s~~~~w~~~~~~~~e~~~~r~~~~a~~pl 422 (467)
T KOG4780|consen 390 SKKLSRSVTWADQNDGRGELCEVRNNDNAAGPL 422 (467)
T ss_pred cccccccchhhhccccccchhheeccCceeccc
Confidence 678999999999999999999999999999984
Done!