BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030014
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q11066|YHI2_MYCTU Uncharacterized HIT-like protein Rv1262c/MT1300 OS=Mycobacterium
tuberculosis GN=Rv1262c PE=4 SV=2
Length = 144
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCA 110
CVFC II GE+PA+++YE L ILD P + GH+L++PK H L TPP +A M A
Sbjct: 3 CVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVA 62
Query: 111 KVPLISNA 118
I+ A
Sbjct: 63 IGQRIARA 70
>sp|P94252|YHIT_BORBU Uncharacterized HIT-like protein BB_0379 OS=Borrelia burgdorferi
(strain ATCC 35210 / B31 / CIP 102532 / DSM 4680)
GN=BB_0379 PE=4 SV=1
Length = 139
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL---DATPPSVVA 106
DC+FCKII E P+ K+YE D L LD NPL++GH+L++PK H L D V
Sbjct: 3 DCIFCKIINKELPSYKVYEDDLVLAFLDINPLTVGHTLVIPKEHSESLLNMDDKFNERVL 62
Query: 107 AMCAKVPLISNAIMK 121
+C K ISNA+ +
Sbjct: 63 KVCKK---ISNALKR 74
>sp|Q58276|Y866_METJA Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0866 PE=4 SV=2
Length = 129
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCA 110
C+FCKII GE PA +YE + L LD NP + GH+L+VPK H+ D P +
Sbjct: 2 CIFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIK 61
Query: 111 KVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYS 153
V + K G + +H+ +P Y
Sbjct: 62 GVKKTVEVLKKLGFDGYNIVNNNGRVAGQEVNHVHFHIIPRYE 104
>sp|O66536|YHIT_AQUAE Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus (strain
VF5) GN=aq_141 PE=4 SV=1
Length = 121
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPS 103
E DC+FCKI+RGE PA K+YE D L D NP++ H LI+PK H + P
Sbjct: 3 EKDCIFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPE 58
>sp|Q9CPS6|HINT3_MOUSE Histidine triad nucleotide-binding protein 3 OS=Mus musculus
GN=Hint3 PE=2 SV=1
Length = 165
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 22/156 (14%)
Query: 20 PAPCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPAVKLY--EYDTCLCILD 77
P P SS G S S+ ++++CVFC++ G+ P +L+ E + +C D
Sbjct: 12 PDPEGSSPGTSESW------------NYDSNCVFCRVAAGQEPKTELFHCENEDLVCFKD 59
Query: 78 TNPLSLGHSLIVPKSHF-SCLDATPPSV--VAAMCA--KVPLISNAIMKATDAGMCQIFY 132
P +L H L+VPK H SC D + V +M A K L N TD M F+
Sbjct: 60 IKPAALYHYLVVPKKHIGSCKDLNKDHIEMVESMVAAGKTMLERNNFTDFTDVRMG--FH 117
Query: 133 TAVTTKLSHSHLPLFFLPSYSLGFLALSCIKSATGW 168
+SH HL + P GFL+ + + W
Sbjct: 118 VPPFCSISHLHLHV-IAPVKEFGFLSKLVYRQDSYW 152
>sp|O07513|HIT_BACSU Protein hit OS=Bacillus subtilis (strain 168) GN=hit PE=1 SV=1
Length = 145
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMC 109
+C+FCKII G+ P+ K+YE + L LD + ++ GH+L++PK+H + +
Sbjct: 6 NCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYF 65
Query: 110 AKVPLISNAIMKATD-AGMCQIFYTAVTTKLSHSHLPLFFLPSYSLG 155
VP I+ AI + G+ + S H + +P Y G
Sbjct: 66 HAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIPRYGKG 112
>sp|P95937|YHIT_SULSO Uncharacterized HIT-like protein SSO2163 OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=SSO2163 PE=4 SV=1
Length = 139
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCA 110
C+FC I+ G +Y D + LD P++ GH+L+VP++H+ V+ +C
Sbjct: 2 CIFCNIVEGRDHGYIVYSNDRVVAFLDKFPITPGHTLVVPRTHYENFLEISEDVIPYLCT 61
Query: 111 KVPLISNAIMKATDAGMCQIF 131
V IS A+ KA A +I
Sbjct: 62 AVRKISIAVKKALKADGIRIL 82
>sp|Q8K3P7|HINT3_RAT Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus
GN=Hint3 PE=2 SV=2
Length = 175
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 42 SQESGHENDCVFCKIIRGESPAVKLY--EYDTCLCILDTNPLSLGHSLIVPKSHF-SCLD 98
S+ ++++CVFC++ G+ P +L E +C D P +L H L+VPK H SC D
Sbjct: 32 SESRDYDSNCVFCRVAAGQEPETELLYCENKDLVCFKDIKPAALHHYLVVPKKHIGSCKD 91
Query: 99 ATPPSV--VAAM--CAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSL 154
+ V +M K L N TD M F+ +SH HL + P+
Sbjct: 92 LNKDHIEMVESMVTVGKTILERNNFTDFTDVRMG--FHVPPFCSVSHLHLHV-IAPAKEF 148
Query: 155 GFLALSCIKSATGW 168
GFL+ + + W
Sbjct: 149 GFLSRVVYRRDSYW 162
>sp|O07817|HITA_NEIGO Protein HitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1
Length = 107
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPS---VV 105
++C+FCKI E PA +YE +C D NP + H L++PK HF L P ++
Sbjct: 2 DNCIFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVHFDSLAHAAPEHQPLL 61
Query: 106 AAMCAKVPLISNAIMKATDAGMCQIFYTAVTT 137
M KVP I+ A +G+ F T + T
Sbjct: 62 GKMMLKVPEIAKA------SGLTDGFKTLINT 87
>sp|O94586|HNT1_SCHPO Hit family protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hnt1 PE=3 SV=1
Length = 133
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSH 93
C+FCKI++G+ P VKL E L LD P S GH+L++PK H
Sbjct: 3 CIFCKIVKGDIPCVKLAETALSLAFLDIAPTSKGHALVIPKEH 45
>sp|P73481|YHIT_SYNY3 Uncharacterized HIT-like protein slr1234 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr1234 PE=4 SV=1
Length = 114
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAM 108
D +F KIIR E PA +YE D CL D NP + H L++PK L A P A +
Sbjct: 3 EDTIFSKIIRREIPAAIVYEDDLCLAFKDVNPQAPVHVLLIPKKPLPQLSAATPEDHALL 62
Query: 109 CAKVPLISNAIMKATDAGMCQIFYTAVTT 137
L+ A A D G+ F +
Sbjct: 63 GH---LLLKAKEVAADLGIGDQFRLVINN 88
>sp|Q04344|HNT1_YEAST Hit family protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HNT1 PE=1 SV=2
Length = 158
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATP 101
C+FCKII+ E P+ KL E LD P + GH+LI+PK H + L P
Sbjct: 25 CIFCKIIKSEIPSFKLIETKYSYAFLDIQPTAEGHALIIPKYHGAKLHDIP 75
>sp|P47378|YHIT_MYCGE Uncharacterized HIT-like protein MG132 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG132 PE=4
SV=1
Length = 141
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSH---FSCLDATPPSVVAA 107
C+FC I++G + K+ E + + LD P++ GH+L++PK H FS D V+
Sbjct: 9 CIFCDIVQGSITSYKIGENEHAIAFLDAFPVADGHTLVIPKKHAVDFSSTDQKELQAVSL 68
Query: 108 MCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLGFLALSCIKSATG 167
+ ++ L +K + G+ + H L +P Y G G
Sbjct: 69 LAKQIALKLKMTLKPS--GLNYVSNEGAIAGQVVFHFHLHIVPKYETG----------KG 116
Query: 168 WGY 170
+GY
Sbjct: 117 FGY 119
>sp|P75504|YHIT_MYCPN Uncharacterized 16.1 kDa HIT-like protein OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_273 PE=4 SV=1
Length = 144
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 42 SQESGHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSH---FSCLD 98
++S N+C+FC I+ G + K+ E + LD P++ GH+L++PK H +S D
Sbjct: 3 QKQSMANNNCIFCGIVEGNVKSFKVGENEHAFAFLDAFPVADGHTLVIPKKHAVNYSSTD 62
Query: 99 ATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLGF 156
V+ + ++ L ++ AG+ + H + +P Y G
Sbjct: 63 DESLKAVSLLAKEMALKLQQRLQP--AGLNYVVNEGAKAGQEVFHYHMHVVPKYETGL 118
>sp|P80912|HINT1_RABIT Histidine triad nucleotide-binding protein 1 OS=Oryctolagus
cuniculus GN=HINT1 PE=1 SV=2
Length = 126
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDAT 100
D +F KIIR E PA ++E D CL D +P + H L++PK H S + A
Sbjct: 15 GDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAA 66
>sp|P0A5B5|YHI1_MYCTU Uncharacterized HIT-like protein Rv0759c/MT0784 OS=Mycobacterium
tuberculosis GN=Rv0759c PE=4 SV=1
Length = 133
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAK 111
+F KII E P +YE D + L P++ GH+L+VP++ P++ + +
Sbjct: 3 IFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSV 62
Query: 112 VPLISNAIMKA---TDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSL 154
LI A+ +A AGM + L HL + P+ SL
Sbjct: 63 SQLIGKAVCRAFSTQRAGM-------IIAGLEVPHLHIHVFPTRSL 101
>sp|P0A5B6|YHI1_MYCBO Uncharacterized HIT-like protein Mb0782c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0782c PE=4 SV=1
Length = 133
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAK 111
+F KII E P +YE D + L P++ GH+L+VP++ P++ + +
Sbjct: 3 IFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPRAEIDHWQNVDPALFGRVMSV 62
Query: 112 VPLISNAIMKA---TDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSL 154
LI A+ +A AGM + L HL + P+ SL
Sbjct: 63 SQLIGKAVCRAFSTQRAGM-------IIAGLEVPHLHIHVFPTRSL 101
>sp|P49774|YHI1_MYCLE Uncharacterized HIT-like protein ML2237 OS=Mycobacterium leprae
(strain TN) GN=ML2237 PE=4 SV=2
Length = 134
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAK 111
+F KII E P +YE D + L P++ GH+L+VP + P++ + A
Sbjct: 4 IFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPCAEIDQWQNVDPAIFGRVIAV 63
Query: 112 VPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLGFLALSCIK 163
LI + +A +A + ++ H H+ +F P++SL + + +
Sbjct: 64 SQLIGKGVCRAFNAERAGVIIAGF--EVPHLHIHVF--PTHSLSNFSFANVD 111
>sp|P62958|HINT1_BOVIN Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1
PE=1 SV=2
Length = 126
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDAT 100
D +F KIIR E PA +YE D CL D +P + H L++PK + S + A
Sbjct: 15 GDTIFGKIIRKEIPAKIIYEDDQCLAFHDISPQAPTHFLVIPKKYISQISAA 66
>sp|Q5RF69|HINT1_PONAB Histidine triad nucleotide-binding protein 1 OS=Pongo abelii
GN=HINT1 PE=2 SV=3
Length = 126
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL 97
D +F KIIR E PA ++E D CL D +P + H L++PK H S +
Sbjct: 16 DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQI 63
>sp|P62959|HINT1_RAT Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus
GN=Hint1 PE=1 SV=5
Length = 126
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL 97
D +F KIIR E PA ++E D CL D +P + H L++PK H S +
Sbjct: 15 GDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQI 63
>sp|P70349|HINT1_MOUSE Histidine triad nucleotide-binding protein 1 OS=Mus musculus
GN=Hint1 PE=1 SV=3
Length = 126
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL 97
D +F KIIR E PA ++E D CL D +P + H L++PK H S +
Sbjct: 15 GDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQI 63
>sp|P49773|HINT1_HUMAN Histidine triad nucleotide-binding protein 1 OS=Homo sapiens
GN=HINT1 PE=1 SV=2
Length = 126
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL 97
D +F KIIR E PA ++E D CL D +P + H L++PK H S +
Sbjct: 15 GDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQI 63
>sp|P53795|HINT_CAEEL Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis
elegans GN=hint-1 PE=4 SV=1
Length = 130
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAM 108
ND +F KIIR E PA ++E D L D +P + H L++PK L+ S AA+
Sbjct: 19 NDTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDS-DAAL 77
Query: 109 CAKVPLISNAIMKATDAGMCQIFYTAVTT 137
K+ + ++ + K GM + V
Sbjct: 78 IGKLMVTASKVAKQL--GMANGYRVVVNN 104
>sp|P32084|Y1390_SYNE7 Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus
elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1
Length = 114
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHF-SCLDATPPSVVAA 107
D +F KIIR E PA +YE D CL D P + H L++PK + L+AT A
Sbjct: 3 EDTIFGKIIRREIPADIVYEDDLCLAFRDVAPQAPVHILVIPKQPIANLLEATAEH--QA 60
Query: 108 MCAKVPLISNAIMKATDAGMCQIFYTAVTT 137
+ + L AI A G+ + + T + T
Sbjct: 61 LLGHLLLTVKAI--AAQEGLTEGYRTVINT 88
>sp|P64382|YHIT_HELPY Uncharacterized HIT-like protein HP_0404 OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=HP_0404 PE=4 SV=1
Length = 104
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCA 110
VF KII+GE P K+ E + L D NP + H+L++PK + P ++A M +
Sbjct: 3 VFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTS 61
>sp|P64383|YHIT_HELPJ Uncharacterized HIT-like protein jhp_0977 OS=Helicobacter pylori
(strain J99) GN=jhp_0977 PE=4 SV=1
Length = 104
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCA 110
VF KII+GE P K+ E + L D NP + H+L++PK + P ++A M +
Sbjct: 3 VFEKIIQGEIPCSKILENERFLSFYDINPKAKVHALVIPKQSIQDFNGITPELMAQMTS 61
>sp|Q5R9L4|HINT3_PONAB Histidine triad nucleotide-binding protein 3 OS=Pongo abelii
GN=HINT3 PE=2 SV=1
Length = 182
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 11 LSSHLLPTGPAPCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPAVKLY--E 68
LS+ L P A ++ S VS + + ++ CVFC+I + P +L E
Sbjct: 8 LSAGLAPDCEASATAESTVSLVGTCEAAAKSPEPKDSDSTCVFCRIAGRQDPGTELLHCE 67
Query: 69 YDTCLCILDTNPLSLGHSLIVPKSHF---SCLDATPPSVVAAM--CAKVPLISNAIMKAT 123
+ +C D P + H L+VPK H L +V M K L N T
Sbjct: 68 NEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFT 127
Query: 124 DAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLGFLALSCIKSATGW 168
+ M F+ +SH HL + P LGFL+ + + W
Sbjct: 128 NVRMG--FHMPPFCSISHLHLHV-LAPVDQLGFLSKLVYRVNSYW 169
>sp|Q9NQE9|HINT3_HUMAN Histidine triad nucleotide-binding protein 3 OS=Homo sapiens
GN=HINT3 PE=1 SV=1
Length = 182
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 12 SSHLLPTGPAPCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPAVKLY--EY 69
S+ L P A ++ + VS+ + + +++ CVFC+I + P +L E
Sbjct: 9 SAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPGTELLHCEN 68
Query: 70 DTCLCILDTNPLSLGHSLIVPKSHF---SCLDATPPSVVAAM--CAKVPLISNAIMKATD 124
+ +C D P + H L+VPK H L +V M K L N T+
Sbjct: 69 EDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTN 128
Query: 125 AGMCQIFYTAVTTKLSHSHLPLFFLPSYSLGFLALSCIKSATGW 168
M F+ +SH HL + P LGFL+ + + W
Sbjct: 129 VRMG--FHMPPFCSISHLHLHV-LAPVDQLGFLSKLVYRVNSYW 169
>sp|Q28BZ2|HINT3_XENTR Histidine triad nucleotide-binding protein 3 OS=Xenopus tropicalis
GN=hint3 PE=2 SV=1
Length = 153
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 42 SQESGHENDCVFCKII-RGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHF-SCLDA 99
Q ++ C+FC+I + ES A L+ D +C D P H L+VPK H +C
Sbjct: 10 EQNHSYDMSCIFCRIANKQESGAELLHSDDDLVCFKDIRPAVTHHYLVVPKKHVGTCKTL 69
Query: 100 TPPSV--VAAM--CAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLG 155
T V + M K L N + D + F+ +SH HL + P+ LG
Sbjct: 70 TKDHVQLIKTMMEVGKSTLQKNNVTDLEDIRLG--FHYPPFCSISHLHLHV-LAPASQLG 126
Query: 156 FLALSCIKSATGW 168
FL+ + + W
Sbjct: 127 FLSRMIYRVNSYW 139
>sp|P32083|YHIT_MYCHR Uncharacterized 13.1 kDa HIT-like protein in P37 5'region
OS=Mycoplasma hyorhinis PE=4 SV=1
Length = 111
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSH 93
+ +F KII+ E PA LYE D + LD + GH L+VPK++
Sbjct: 6 EELFLKIIKREEPATILYEDDKVIAFLDKYAHTKGHFLVVPKNY 49
>sp|Q23921|PKIA_DICDI Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2
Length = 127
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPK 91
D +F KII G P+ K Y+ + C+ I D NP + H L++PK
Sbjct: 13 RDTIFAKIISGAIPSKKFYDDEYCIAIEDINPQAPVHLLVIPK 55
>sp|P26724|YHIT_AZOBR Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region
OS=Azospirillum brasilense PE=4 SV=1
Length = 122
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 47 HENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLD 98
++ + VF +I+RGE P K+ E + L D NP + H L++PK + +D
Sbjct: 5 YDPNNVFARILRGEIPCKKVLETEHALAFHDINPQAPTHILVIPKGAYVDMD 56
>sp|Q2YDJ4|HINT3_BOVIN Histidine triad nucleotide-binding protein 3 OS=Bos taurus GN=HINT3
PE=2 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 45 SGHENDCVFCKIIRGESPAVKLY--EYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPP 102
+ + + CVFC+I + P +L E + +C D P + H L+VPK HF
Sbjct: 42 ANYSSKCVFCRIAAHQDPGTELLHCENEDLVCFKDIKPAAPHHYLVVPKKHFENCKYLKK 101
Query: 103 SVVAAMCAKVPLISNAIMKA---TDAGMCQI-FYTAVTTKLSHSHLPLFFLPSYSLGFLA 158
+ + + + AI++ TD ++ F+ + ++H HL + P+ L F++
Sbjct: 102 DQI-ELIENMVTVGKAILERNNFTDFENTRMGFHVSPFCSIAHLHLHV-LAPADQLSFMS 159
Query: 159 LSCIKSATGW 168
+ + W
Sbjct: 160 RLVYRVNSYW 169
>sp|Q5PNN8|HINT3_DANRE Histidine triad nucleotide-binding protein 3 OS=Danio rerio
GN=hint3 PE=2 SV=1
Length = 160
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 30 SASFCAQQRLSHSQESGHENDCVFCKIIRGESPAVK-LYEYDTCLCILDTNPLSLGHSLI 88
++ FC ++ + + + C+FC I +G+ + L E + +C D NP + H L+
Sbjct: 4 NSCFCENKQ--DTIDESLDKTCIFCTIAKGDDRYTEILAEDEDFVCFRDINPGAPHHYLV 61
Query: 89 VPKSH-FSCLD--ATPPSVVAAMC--AKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSH 143
+PK H +SCL A S+V M + L +N + D + F+ + H H
Sbjct: 62 IPKKHIYSCLSLYADDISLVRGMAEMGRNVLKANNVTDLKDISLG--FHVPPYITVPHLH 119
Query: 144 LPLFFLPSYSLGFLALSCIKSATGWGYFGIVNVISVMSHGQ 184
L + P L A++ K T W Y + ++ G+
Sbjct: 120 LHV-LAPYSQLYKWAIN--KFRTNW-YINEEKTVEILMKGK 156
>sp|Q9ZDL1|YHIT_RICPR Uncharacterized HIT-like protein RP317 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP317 PE=4 SV=1
Length = 120
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 47 HENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVA 106
+ + VF KII PA +YE L D P++ H +++PK+ + +D T A
Sbjct: 2 YNKENVFAKIITKNLPAEIIYEDKQILAFKDIAPIAPVHIIVIPKNEY--IDYTDFISKA 59
Query: 107 AMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLG 155
++ S A +AG+ ++ Y +T K S +F + +G
Sbjct: 60 SIDEIKHFFSKIADIANEAGLDKVGYRLITNKGEKSGQTIFHFHFHIIG 108
>sp|P42856|ZB14_MAIZE 14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1
Length = 128
Score = 38.5 bits (88), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPK 91
+F KII+ E P+ +YE + L D NP + H LI+PK
Sbjct: 17 TIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPK 57
>sp|P42855|ZB14_BRAJU 14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3
SV=1
Length = 113
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPK 91
D +F KII E P+ +YE D L D P H L++PK
Sbjct: 1 DTIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPK 42
>sp|P44956|Y961_HAEIN HIT-like protein HI_0961 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0961 PE=1 SV=1
Length = 116
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAM 108
+ +F KIIR E PA +Y+ + D +P + H LI+P ++ A+
Sbjct: 3 EETIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDEVAL 62
Query: 109 CAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPSYSLG 155
L S A A + G+ + Y + H +F L + +G
Sbjct: 63 GR---LFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVG 106
>sp|Q9PK09|Y664_CHLMU Uncharacterized HIT-like protein TC_0664 OS=Chlamydia muridarum
(strain MoPn / Nigg) GN=TC_0664 PE=4 SV=1
Length = 126
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL 97
+F +II G K++E + + I D P + H LI+PK H L
Sbjct: 18 TIFERIIEGAVECDKVFEDENFIVIKDKFPQAPVHLLIIPKKHIEKL 64
>sp|O84390|YHIT_CHLTR Uncharacterized HIT-like protein CT_385 OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=CT_385 PE=4 SV=1
Length = 111
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCL 97
+F +II G K++E + + I D P + H LI+PK H L
Sbjct: 3 TIFERIIEGAVECDKVFEDENFIVIKDKFPQAPVHLLIIPKKHIEKL 49
>sp|Q9BX68|HINT2_HUMAN Histidine triad nucleotide-binding protein 2, mitochondrial
OS=Homo sapiens GN=HINT2 PE=1 SV=1
Length = 163
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKS 92
+F +I+ PA LYE CL D P + H L++PK
Sbjct: 54 TIFSRILDKSLPADILYEDQQCLVFRDVAPQAPVHFLVIPKK 95
>sp|Q8SQ21|HINT2_BOVIN Histidine triad nucleotide-binding protein 2, mitochondrial
OS=Bos taurus GN=HINT2 PE=2 SV=1
Length = 163
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKS 92
+F +I+ PA LYE CL D P + H L++PK
Sbjct: 55 IFSRILDRSLPADILYEDQQCLAFRDVAPQAPVHFLVIPKK 95
>sp|Q9D0S9|HINT2_MOUSE Histidine triad nucleotide-binding protein 2, mitochondrial
OS=Mus musculus GN=Hint2 PE=2 SV=1
Length = 163
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKS 92
G + +F +I+ PA LYE CL D P + H L++P+
Sbjct: 49 GGASPTIFSRILDRSLPADILYEDQQCLVFRDVAPQAPVHFLVIPRK 95
>sp|Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis
thaliana GN=At5g56900 PE=2 SV=1
Length = 596
Score = 32.0 bits (71), Expect = 2.3, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 37 QRLSHSQESGHENDCVFCKIIRGESPAVKLYEY----DTCLCILDTNPLSLGHSLIVPKS 92
QR S+ + +C FC SP+V+ + ++ C L L H LI+P
Sbjct: 369 QRKPRSENANRSKECWFCL----SSPSVESHLIVSVGESFYCALPKGSLVEDHILIIPIE 424
Query: 93 HFSCLDATPPSVVAAMCAKVPLISNAIM-KATDAGMCQIFYTAVTTKLSHSHLPLFFLPS 151
H P V + + + N + DA +F+ V+ ++SH++L + +PS
Sbjct: 425 HLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDA----VFFELVSKRVSHANLQVVPVPS 480
>sp|Q558W0|Y2839_DICDI HIT domain-containing protein DDB_G0272839 OS=Dictyostelium
discoideum GN=DDB_G0272839 PE=2 SV=1
Length = 390
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 64 VKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAM 108
V LY D + +LD P + H L++P+ + LD PS + +
Sbjct: 243 VVLYYDDKTVAVLDKYPKAKHHYLVIPRVEINTLDELTPSFIPML 287
>sp|B6ES35|GCSP_ALISL Glycine dehydrogenase [decarboxylating] OS=Aliivibrio salmonicida
(strain LFI1238) GN=gcvP PE=3 SV=1
Length = 955
Score = 32.0 bits (71), Expect = 2.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 22 PCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPA 63
P S +SG A A QR S+ GH N C+ G +PA
Sbjct: 566 PNSGASGEYAGLIAIQRYHESRNEGHRNVCLIPSSAHGTNPA 607
>sp|C3LUU7|GCSP_VIBCM Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype
O1 (strain M66-2) GN=gcvP PE=3 SV=1
Length = 954
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 22 PCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPA 63
P S +SG A A QR S+ GH N C+ G +PA
Sbjct: 565 PNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIPSSAHGTNPA 606
>sp|A5EYY8|GCSP_VIBC3 Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype
O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3
SV=1
Length = 954
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 22 PCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPA 63
P S +SG A A QR S+ GH N C+ G +PA
Sbjct: 565 PNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIPSSAHGTNPA 606
>sp|A7N5C4|GCSP_VIBHB Glycine dehydrogenase [decarboxylating] OS=Vibrio harveyi (strain
ATCC BAA-1116 / BB120) GN=gcvP PE=3 SV=1
Length = 954
Score = 31.6 bits (70), Expect = 3.3, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 22 PCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPA 63
P S +SG A A QR S+ GH N C+ G +PA
Sbjct: 565 PNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSAHGTNPA 606
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,089,690
Number of Sequences: 539616
Number of extensions: 2471944
Number of successful extensions: 5167
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5111
Number of HSP's gapped (non-prelim): 58
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)