Query 030014
Match_columns 184
No_of_seqs 181 out of 1311
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 07:10:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030014.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030014hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0537 Hit Diadenosine tetrap 100.0 2.4E-31 5.1E-36 204.5 13.0 106 49-156 1-109 (138)
2 PRK10687 purine nucleoside pho 100.0 5.1E-30 1.1E-34 192.5 11.3 106 48-155 2-111 (119)
3 cd01277 HINT_subgroup HINT (hi 100.0 2.2E-29 4.7E-34 182.6 12.2 100 50-151 1-103 (103)
4 cd01275 FHIT FHIT (fragile his 100.0 9.9E-29 2.1E-33 186.3 12.5 103 51-155 1-107 (126)
5 cd01276 PKCI_related Protein K 100.0 1.1E-27 2.3E-32 174.5 11.1 99 50-151 1-104 (104)
6 PF01230 HIT: HIT domain; Int 99.9 3.2E-26 7E-31 165.4 9.6 94 58-153 1-97 (98)
7 TIGR00209 galT_1 galactose-1-p 99.9 2.8E-26 6E-31 199.9 9.8 156 19-177 157-326 (347)
8 cd01278 aprataxin_related apra 99.9 2E-25 4.3E-30 162.7 11.7 98 50-149 1-103 (104)
9 KOG3275 Zinc-binding protein o 99.9 5.4E-25 1.2E-29 161.9 11.7 102 48-155 15-123 (127)
10 PLN02643 ADP-glucose phosphory 99.9 2.1E-25 4.6E-30 193.6 11.3 120 47-177 196-320 (336)
11 PRK11720 galactose-1-phosphate 99.9 2.8E-25 6.2E-30 193.5 10.0 154 19-177 157-326 (346)
12 cd00608 GalT Galactose-1-phosp 99.9 2.6E-24 5.7E-29 186.3 10.0 155 18-177 146-317 (329)
13 cd00468 HIT_like HIT family: H 99.9 9E-23 2E-27 142.9 9.5 83 66-150 1-86 (86)
14 KOG3379 Diadenosine polyphosph 99.8 2.5E-20 5.5E-25 140.7 9.7 105 62-168 16-124 (150)
15 PF11969 DcpS_C: Scavenger mRN 99.8 4.9E-19 1.1E-23 132.3 7.7 98 50-150 1-103 (116)
16 KOG4359 Protein kinase C inhib 99.7 6.1E-16 1.3E-20 117.4 9.1 132 22-158 8-144 (166)
17 COG1085 GalT Galactose-1-phosp 99.6 9.5E-16 2.1E-20 132.4 7.1 133 18-150 147-291 (338)
18 PF02744 GalP_UDP_tr_C: Galact 99.6 2.4E-15 5.3E-20 118.9 8.0 85 49-133 13-100 (166)
19 KOG2958 Galactose-1-phosphate 99.3 2.2E-12 4.8E-17 108.8 6.0 105 46-151 196-309 (354)
20 PF04677 CwfJ_C_1: Protein sim 99.1 1.2E-09 2.7E-14 82.2 12.2 103 45-152 7-109 (121)
21 KOG2476 Uncharacterized conser 98.5 1.1E-06 2.5E-11 78.6 12.1 102 45-151 315-416 (528)
22 KOG0562 Predicted hydrolase (H 98.4 6.1E-07 1.3E-11 70.4 4.9 103 62-172 14-122 (184)
23 PLN03103 GDP-L-galactose-hexos 97.7 0.00015 3.2E-09 64.6 7.2 71 68-146 167-239 (403)
24 KOG2477 Uncharacterized conser 97.6 0.00053 1.1E-08 62.4 9.4 103 47-152 405-508 (628)
25 cd00608 GalT Galactose-1-phosp 97.1 0.0025 5.5E-08 55.4 8.7 66 85-150 95-163 (329)
26 KOG2720 Predicted hydrolase (H 97.1 0.00047 1E-08 60.1 3.8 71 73-151 169-241 (431)
27 KOG3969 Uncharacterized conser 97.0 0.0078 1.7E-07 51.2 9.9 88 62-152 159-257 (310)
28 PLN02643 ADP-glucose phosphory 96.7 0.017 3.6E-07 50.6 10.0 67 84-150 108-177 (336)
29 COG1085 GalT Galactose-1-phosp 96.6 0.015 3.3E-07 50.9 9.2 68 85-152 96-166 (338)
30 PRK11720 galactose-1-phosphate 96.2 0.041 8.9E-07 48.4 9.4 65 84-150 106-173 (346)
31 TIGR00672 cdh CDP-diacylglycer 96.0 0.029 6.2E-07 47.2 7.3 96 49-147 39-143 (250)
32 PRK05471 CDP-diacylglycerol py 95.6 0.052 1.1E-06 45.7 7.4 97 49-147 40-144 (252)
33 TIGR00209 galT_1 galactose-1-p 95.0 0.23 4.9E-06 43.8 9.8 65 84-150 106-173 (347)
34 PF02611 CDH: CDP-diacylglycer 94.3 0.12 2.7E-06 42.7 6.0 83 63-147 26-115 (222)
35 COG2134 Cdh CDP-diacylglycerol 91.4 0.58 1.3E-05 38.5 5.8 82 66-150 58-147 (252)
36 COG5075 Uncharacterized conser 89.4 0.71 1.5E-05 38.9 4.8 87 61-150 153-250 (305)
37 COG4360 APA2 ATP adenylyltrans 87.6 0.65 1.4E-05 39.1 3.5 68 71-151 93-163 (298)
38 PF01844 HNH: HNH endonuclease 86.8 0.45 9.7E-06 28.8 1.6 32 8-39 12-45 (47)
39 PRK11295 hypothetical protein; 77.7 1.1 2.4E-05 33.3 1.0 33 7-39 39-73 (113)
40 smart00507 HNHc HNH nucleases. 77.4 1.4 3E-05 26.4 1.2 27 9-35 23-51 (52)
41 cd00085 HNHc HNH nucleases; HN 76.6 0.8 1.7E-05 28.1 -0.0 30 8-37 24-55 (57)
42 PF13395 HNH_4: HNH endonuclea 74.4 2.1 4.5E-05 27.2 1.5 30 10-39 18-49 (54)
43 PF01087 GalP_UDP_transf: Gala 73.8 7.6 0.00017 30.8 5.0 61 85-145 112-175 (183)
44 PF14317 YcxB: YcxB-like prote 70.3 10 0.00023 23.5 4.2 39 64-112 23-61 (62)
45 PF03432 Relaxase: Relaxase/Mo 69.0 8.2 0.00018 31.2 4.3 37 115-155 77-115 (242)
46 PF01076 Mob_Pre: Plasmid reco 68.4 17 0.00037 29.1 6.0 52 98-155 93-145 (196)
47 PF11296 DUF3097: Protein of u 67.0 3.3 7.2E-05 34.9 1.5 15 3-17 156-170 (275)
48 KOG2958 Galactose-1-phosphate 65.0 37 0.0008 29.6 7.5 51 92-145 117-173 (354)
49 TIGR03793 TOMM_pelo TOMM prope 41.2 67 0.0015 22.1 4.4 23 83-108 52-74 (77)
50 PF02729 OTCace_N: Aspartate/o 40.4 35 0.00075 26.0 3.2 31 92-122 1-31 (142)
51 PF03389 MobA_MobL: MobA/MobL 40.4 77 0.0017 25.9 5.4 46 99-153 78-125 (216)
52 COG1943 Transposase and inacti 36.3 1.4E+02 0.0031 22.4 6.0 60 80-151 10-69 (136)
53 PF06156 DUF972: Protein of un 33.3 20 0.00044 26.3 0.8 15 41-55 92-106 (107)
54 TIGR01865 cas_Csn1 CRISPR-asso 32.6 13 0.00029 36.4 -0.3 31 9-39 601-633 (805)
55 PLN02921 naphthoate synthase 29.7 1.2E+02 0.0026 26.4 5.2 20 1-20 1-20 (327)
56 PF13960 DUF4218: Domain of un 29.1 24 0.00052 26.8 0.6 34 99-132 17-50 (128)
57 smart00538 POP4 A domain found 27.3 1E+02 0.0022 21.8 3.6 30 62-95 30-59 (92)
58 PF09779 Ima1_N: Ima1 N-termin 26.9 31 0.00067 26.0 0.9 31 29-59 1-31 (131)
59 PF14394 DUF4423: Domain of un 26.5 1.6E+02 0.0035 23.1 5.0 51 91-150 119-170 (171)
60 COG2928 Uncharacterized conser 25.9 85 0.0018 26.1 3.3 36 69-105 152-188 (222)
61 KOG4692 Predicted E3 ubiquitin 25.4 34 0.00073 30.6 1.0 10 47-56 455-464 (489)
62 COG2108 Uncharacterized conser 25.4 34 0.00074 30.2 1.0 43 29-71 19-62 (353)
63 cd01617 DCX Ubiquitin-like dom 25.4 75 0.0016 21.6 2.6 28 71-98 2-29 (80)
64 TIGR02768 TraA_Ti Ti-type conj 25.3 1.4E+02 0.0031 29.0 5.3 41 99-145 95-137 (744)
65 PRK07218 replication factor A; 25.1 1.6E+02 0.0035 26.8 5.3 65 29-110 298-362 (423)
66 smart00537 DCX Domain in the D 24.6 57 0.0012 22.8 1.9 29 71-99 7-35 (89)
67 PRK03879 ribonuclease P protei 24.0 1.3E+02 0.0028 21.6 3.6 29 62-95 32-60 (96)
68 COG1403 McrA Restriction endon 23.1 24 0.00052 25.6 -0.3 31 9-39 81-113 (146)
69 PRK13169 DNA replication intia 23.1 31 0.00067 25.5 0.3 15 41-55 89-104 (110)
70 PF05840 Phage_GPA: Bacterioph 20.7 6.1E+02 0.013 22.7 8.0 81 68-151 176-259 (371)
71 PHA00330 putative replication 20.0 3.6E+02 0.0079 23.6 6.2 73 107-181 105-190 (316)
No 1
>COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only]
Probab=99.97 E-value=2.4e-31 Score=204.47 Aligned_cols=106 Identities=36% Similarity=0.557 Sum_probs=101.5
Q ss_pred CCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCce
Q 030014 49 NDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMC 128 (184)
Q Consensus 49 ~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ 128 (184)
+.|+||+++.+|.|+.+||||++++||+|.+|.++||+|||||+|+.++.+++++++.+|+.+++++++++++.+++++|
T Consensus 1 ~~ciFc~ii~~e~~~~~Vye~~~~~afld~~P~~~gH~LviPk~h~~~l~~l~~~~~~~l~~~~~~ia~al~~~~~~~g~ 80 (138)
T COG0537 1 MMCIFCKIIRGEIPANKVYEDEHVLAFLDIYPAAPGHTLVIPKRHVSDLEDLDPEELAELFLLAQKIAKALKEAFGADGY 80 (138)
T ss_pred CCceeeeeecCCCCceEEEeCCCEEEEecCCCCCCCeEEEEeccchhhhhhCCHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEe---CCCCceeeeEecceeecCCCCCC
Q 030014 129 QIFYT---AVTTKLSHSHLPLFFLPSYSLGF 156 (184)
Q Consensus 129 ni~~n---~~gq~v~HlHlHi~iiPR~~~~~ 156 (184)
|+++| .+||.|+|+|+| ||||+++|.
T Consensus 81 ni~~N~g~~agq~V~HlH~H--vIPr~~~d~ 109 (138)
T COG0537 81 NIGINNGKAAGQEVFHLHIH--IIPRYKGDD 109 (138)
T ss_pred EEEEecCcccCcCcceEEEE--EcCCcCCCC
Confidence 99998 368999999999 999999763
No 2
>PRK10687 purine nucleoside phosphoramidase; Provisional
Probab=99.97 E-value=5.1e-30 Score=192.51 Aligned_cols=106 Identities=19% Similarity=0.320 Sum_probs=96.0
Q ss_pred CCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHH-HcCCC
Q 030014 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMK-ATDAG 126 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~-~~~~~ 126 (184)
.++|+||+|++|+.|..+|||||.++||+|.+|.++||+||+||+|+.++.||+++++.+++.+++.+.+.+++ .++++
T Consensus 2 ~~~CiFC~I~~g~~p~~~v~edd~~~aflD~~P~~~GH~LViPK~H~~~l~dl~~~~~~~l~~l~~~~~~~~~~~~~~~~ 81 (119)
T PRK10687 2 AEETIFSKIIRREIPSDIVYQDELVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_pred CCCCchhhhhcCCCCCCEEEECCCEEEEEcCCCCCCccEEEEehhHhCChhHCChHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 35799999999999999999999999999999999999999999999999999999999999998877776653 47889
Q ss_pred ceEEEEeC---CCCceeeeEecceeecCCCCC
Q 030014 127 MCQIFYTA---VTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 127 ~~ni~~n~---~gq~v~HlHlHi~iiPR~~~~ 155 (184)
+||+++|. +||+|+|+|+| ||||+...
T Consensus 82 g~~l~~n~G~~agQ~V~HlHiH--vI~g~~~~ 111 (119)
T PRK10687 82 GYRLIMNTNRHGGQEVYHIHMH--LLGGRPLG 111 (119)
T ss_pred ceEEEEeCCCcCCcccCEEEEE--ECCCcccC
Confidence 99999983 69999999998 99998743
No 3
>cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides. This subgroup includes members from all three forms of cellular life. Although the biochemical function has not been characterised for many of the members of this subgroup, the proteins from Yeast have been shown to be involved in secretion, peroxisome formation and gene expression.
Probab=99.96 E-value=2.2e-29 Score=182.59 Aligned_cols=100 Identities=38% Similarity=0.644 Sum_probs=95.6
Q ss_pred CCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceE
Q 030014 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQ 129 (184)
Q Consensus 50 ~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~n 129 (184)
+|+||+++++|.+.++|||+++|+||+|.+|.+|||+||+||+|+.++.||+++|+.+|+.+++++.+++++.+++++||
T Consensus 1 ~C~~c~ii~~e~~~~iv~e~~~~~a~~~~~~~~pg~~lI~Pk~H~~~~~~l~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 80 (103)
T cd01277 1 DCIFCKIIAGEIPSYKVYEDDHVLAFLDINPASKGHTLVIPKKHYENLLDLDPEELAELILAAKKVARALKKALKADGLN 80 (103)
T ss_pred CCccccccCCCCCCCEEEeCCCEEEEECCCCCCCeeEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 59999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEe---CCCCceeeeEecceeecC
Q 030014 130 IFYT---AVTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 130 i~~n---~~gq~v~HlHlHi~iiPR 151 (184)
+++| ..||+++|+|+| |+||
T Consensus 81 ~~~~~~~~~g~~~~H~HiH--iiPR 103 (103)
T cd01277 81 ILQNNGRAAGQVVFHVHVH--VIPR 103 (103)
T ss_pred EEEeCCcccCcccCEEEEE--EccC
Confidence 9997 357899999998 9998
No 4
>cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours.
Probab=99.96 E-value=9.9e-29 Score=186.34 Aligned_cols=103 Identities=23% Similarity=0.399 Sum_probs=98.0
Q ss_pred CeeceeccCCCc-ccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceE
Q 030014 51 CVFCKIIRGESP-AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQ 129 (184)
Q Consensus 51 C~FC~ii~~e~~-~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~n 129 (184)
|+||++++++.+ .++|||+++++||+|.+|.+|||+||+||+|+.++.+|+++|+.+|+.+++++++++++.+++++||
T Consensus 1 C~fC~i~~~e~~~~~iv~e~~~~~~~~~~~p~~~gh~lIiPk~H~~~~~~L~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 80 (126)
T cd01275 1 CVFCDIPIKPDEDNLVFYRTKHSFAVVNLYPYNPGHVLVVPYRHVPRLEDLTPEEIADLFKLVQLAMKALKVVYKPDGFN 80 (126)
T ss_pred CccccCccCCCccccEEEeCCCEEEEEcCCCCCCCcEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 999999999876 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEe---CCCCceeeeEecceeecCCCCC
Q 030014 130 IFYT---AVTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 130 i~~n---~~gq~v~HlHlHi~iiPR~~~~ 155 (184)
+++| .+||+++|+|+| |+||+.++
T Consensus 81 ~~~~~g~~~gq~v~H~HiH--iiPR~~~d 107 (126)
T cd01275 81 IGINDGKAGGGIVPHVHIH--IVPRWNGD 107 (126)
T ss_pred EEEeCCcccCCCcCEEEEE--EeCCcCCC
Confidence 9997 268999999998 99999876
No 5
>cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.
Probab=99.95 E-value=1.1e-27 Score=174.46 Aligned_cols=99 Identities=31% Similarity=0.504 Sum_probs=89.8
Q ss_pred CCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CCc
Q 030014 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD--AGM 127 (184)
Q Consensus 50 ~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~--~~~ 127 (184)
+|+||+++++|.+.++||||+.++||+|++|.+|||+||+||+|+.++.||+++++.++..+++.+ +++.+.++ +++
T Consensus 1 ~C~fc~i~~~e~~~~iv~e~~~~~a~~~~~p~~~gh~lIiPk~H~~~~~dl~~~~~~~l~~~~~~~-~~~~~~~~~~~~~ 79 (104)
T cd01276 1 DCIFCKIIRGEIPAKKVYEDDEVLAFHDINPQAPVHILVIPKKHIASLSDATEEDEELLGHLLSAA-AKVAKDLGIAEDG 79 (104)
T ss_pred CCcceecccCCCccCEEEECCCEEEEECCCCCCCCEEEEEecceeCChHHcccccHHHHHHHHHHH-HHHHHHhCCCCCC
Confidence 599999999999999999999999999999999999999999999999999999999999888888 56666666 789
Q ss_pred eEEEEeC---CCCceeeeEecceeecC
Q 030014 128 CQIFYTA---VTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 128 ~ni~~n~---~gq~v~HlHlHi~iiPR 151 (184)
||+++|. +||+++|+|+| ||+|
T Consensus 80 ~n~~~~~g~~~g~~v~H~HiH--ii~~ 104 (104)
T cd01276 80 YRLVINCGKDGGQEVFHLHLH--LLGG 104 (104)
T ss_pred EEEEEeCCCCCCCceeEEEEE--EeCC
Confidence 9999983 58999999998 8885
No 6
>PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms []. Crystal structure of rabbit Hint, purified as an adenosine and AMP-binding protein, showed that proteins in the HIT superfamily are conserved as nucleotide-binding proteins and that Hint homologues, which are found in all forms of life, are structurally related to Fhit homologues and GalT-related enzymes, which have more restricted phylogenetic profiles []. Hint homologues including rabbit Hint and yeast Hnt1 hydrolyse adenosine 5' monophosphoramide substrates such as AMP-NH2 and AMP-lysine to AMP plus the amine product and function as positive regulators of Cdk7/Kin28 in vivo []. Fhit homologues are diadenosine polyphosphate hydrolases [] and function as tumour suppressors in human and mouse [] though the tumour suppressing function of Fhit does not depend on ApppA hydrolysis []. The third branch of the HIT superfamily, which includes GalT homologues, contains a related His-X-His-X-Gln motif and transfers nucleoside monophosphate moieties to phosphorylated second substrates rather than hydrolysing them [].; PDB: 3LB5_B 1EMS_A 1Y23_A 3ANO_B 1KPE_B 1KPC_A 4EQE_B 1KPA_A 1KPB_B 4EQG_B ....
Probab=99.93 E-value=3.2e-26 Score=165.36 Aligned_cols=94 Identities=32% Similarity=0.537 Sum_probs=87.7
Q ss_pred cCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---C
Q 030014 58 RGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---A 134 (184)
Q Consensus 58 ~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~ 134 (184)
++|.+..+|||||.++||++.+|.++||+||+||+|+.++.||+++++.+|+.+++++++++++.+++++||+.++ .
T Consensus 1 ~~e~~~~vv~e~~~~~~~~~~~p~~~gh~LVipk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~g~~ 80 (98)
T PF01230_consen 1 RGEIPARVVYEDDHFVAFLDIFPISPGHLLVIPKRHVESLSDLPPEERAELMQLVQKVAKALKEAFGPDGYNVIINNGPA 80 (98)
T ss_dssp TTSSHCEEEEE-SSEEEEEESSTSSTTEEEEEESSTGSSGGGSHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESGG
T ss_pred CCCCCeeEEEECCCEEEEEcCCCCCCeEEEEEecccccchhcCCHHHHHHHHHHHHHHHHHHhcccccceeeccccchhh
Confidence 3678899999999999999999999999999999999999999999999999999999999999999999999997 3
Q ss_pred CCCceeeeEecceeecCCC
Q 030014 135 VTTKLSHSHLPLFFLPSYS 153 (184)
Q Consensus 135 ~gq~v~HlHlHi~iiPR~~ 153 (184)
+||+++|+|+| ||||++
T Consensus 81 ~gq~v~HlH~H--viPR~~ 97 (98)
T PF01230_consen 81 AGQSVPHLHFH--VIPRYK 97 (98)
T ss_dssp GTSSSSS-EEE--EEEEST
T ss_pred hcCccCEEEEE--EecccC
Confidence 79999999999 999986
No 7
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1. This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM.
Probab=99.93 E-value=2.8e-26 Score=199.87 Aligned_cols=156 Identities=8% Similarity=0.034 Sum_probs=120.4
Q ss_pred CCCCCCCCCC--ccc----hhhhhhccCCccc-CCCCCCCeeceeccCCC--cccEEEECCeEEEEEcCCCCCceEEEEE
Q 030014 19 GPAPCSSSSG--VSA----SFCAQQRLSHSQE-SGHENDCVFCKIIRGES--PAVKLYEYDTCLCILDTNPLSLGHSLIV 89 (184)
Q Consensus 19 ~~~~~~~~~~--~~~----~~c~~~~~~~~~~-~~~~~~C~FC~ii~~e~--~~~iV~E~d~~~af~~~~p~~pGH~LVv 89 (184)
..|.|-+|+| ..+ ++-.+.+....+. -...+.|+||+|+++|. +.++||||++|+||+|++|.+|||+||+
T Consensus 157 ~~GaSl~HPH~Qi~a~p~vP~~~~~e~~~~~~y~~~~g~clfcdIi~~E~~~~~riV~End~fvAf~p~~p~~Pgh~lIi 236 (347)
T TIGR00209 157 AMGCSNPHPHGQIWANSFLPNEVEREDRLQKEYFAEHKSPMLVDYVKRELADKSRTVVETEHWIAVVPYWAIWPFETLLL 236 (347)
T ss_pred ccCcCCCCCceeeeeCCCCChHHHHHHHHHHHHHHHcCCccHHHHHHhHhhcCCeEEEECCCEEEEeccCCCCCCeEEEe
Confidence 4556667777 222 3333332211111 13447899999999987 4799999999999999999999999999
Q ss_pred eCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEe---CCCCceeeeEecceeecCCC-CCCcccccccc
Q 030014 90 PKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG-MCQIFYT---AVTTKLSHSHLPLFFLPSYS-LGFLALSCIKS 164 (184)
Q Consensus 90 PKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~-~~ni~~n---~~gq~v~HlHlHi~iiPR~~-~~~~~~~~~~~ 164 (184)
||+|+.+|.+|+++++.+|+.+++++.+++++.++.+ +||+++| ..++..+|+|||+||+||+. .+. ...+..
T Consensus 237 PKrH~~~~~dl~d~e~~~La~~lk~v~~~l~~~~~~~~pYn~~~h~~p~~~~~~~~~H~HihiiPrl~R~~~--~~k~~a 314 (347)
T TIGR00209 237 PKAHVLRITDLTDAQRSDLALILKKLTSKYDNLFETSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSAT--VRKFMV 314 (347)
T ss_pred eccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcceeEEecccCCCCCcEEEEEEEEeCCcccccc--ccccee
Confidence 9999999999999999999999999999999999755 8999998 24666788888888999964 221 223445
Q ss_pred CCCccceeeeeee
Q 030014 165 ATGWGYFGIVNVI 177 (184)
Q Consensus 165 ~~~Wg~~~~~n~~ 177 (184)
+..| .+.++|++
T Consensus 315 GfE~-~g~~in~~ 326 (347)
T TIGR00209 315 GYEM-LGETQRDL 326 (347)
T ss_pred ehhh-hcCccCCC
Confidence 6778 77777775
No 8
>cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome. All the members of this subgroup have the conserved HxHxHxx (where x is a hydrophobic residue) signature motif. Members of this subgroup are predominantly eukaryotic in origin.
Probab=99.93 E-value=2e-25 Score=162.72 Aligned_cols=98 Identities=27% Similarity=0.433 Sum_probs=88.8
Q ss_pred CCeeceeccCCC--cccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHH--cCC
Q 030014 50 DCVFCKIIRGES--PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKA--TDA 125 (184)
Q Consensus 50 ~C~FC~ii~~e~--~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~--~~~ 125 (184)
.|+||+++++|. +.++|||++.++||.|++|.+|||+||+||+|+.++.+|+++++.+|+.+++.+.+.+++. +++
T Consensus 1 ~c~fc~i~~~e~~~~~~iv~~~~~~~a~~~~~p~~~~h~lIiPk~h~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~ 80 (104)
T cd01278 1 LCHFCDIAKRRDPDPEDQVYEDDRVVVFKDIYPKARHHYLVIPKEHIASLKALTKEDVPLLEHMETVGREKLLRSDNTDP 80 (104)
T ss_pred CCccccCccCCCCCCccEEEeCCCEEEEECCCCCCCceEEEEecCCCCChHHCCHhHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 499999999886 5799999999999999999999999999999999999999999999999999888878776 577
Q ss_pred CceEEEEeC-CCCceeeeEecceee
Q 030014 126 GMCQIFYTA-VTTKLSHSHLPLFFL 149 (184)
Q Consensus 126 ~~~ni~~n~-~gq~v~HlHlHi~ii 149 (184)
++||+++|. ..|+|+|+|+| ||
T Consensus 81 ~~~n~g~h~~p~~~v~H~H~H--vi 103 (104)
T cd01278 81 SEFRFGFHAPPFTSVSHLHLH--VI 103 (104)
T ss_pred cCeEEEeCCCCCcCeeeEEEE--ee
Confidence 899999983 34799999999 65
No 9
>KOG3275 consensus Zinc-binding protein of the histidine triad (HIT) family [Signal transduction mechanisms]
Probab=99.93 E-value=5.4e-25 Score=161.87 Aligned_cols=102 Identities=27% Similarity=0.448 Sum_probs=86.6
Q ss_pred CCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCcc---CCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 030014 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHF---SCLDATPPSVVAAMCAKVPLISNAIMKATD 124 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv---~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~ 124 (184)
+.+|+||+|+++|+|+.+|||||.++||.|..|..|+|.|||||+|+ +...|.+++.+..|+.+.++++ +.+|
T Consensus 15 ~~~tIF~kIi~keIPa~ii~Edd~~lAF~Di~Pqap~HfLvIPK~hi~~~s~aed~~~e~Lg~ll~~~k~va----k~~G 90 (127)
T KOG3275|consen 15 AAPTIFCKIIRKEIPAKIIFEDDRCLAFHDIAPQAPGHFLVIPKKHITQLSKAEDRDDELLGHLLPVAKKVA----KALG 90 (127)
T ss_pred CCCcEeeeeecccCCcceEeeccceEEEEecCCCCCceEEEeecccccchhhcccCCHHHHHHHHHHHHHHH----HHhC
Confidence 78899999999999999999999999999999999999999999994 4456777777777776555554 4567
Q ss_pred CC-ceEEEEeC---CCCceeeeEecceeecCCCCC
Q 030014 125 AG-MCQIFYTA---VTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 125 ~~-~~ni~~n~---~gq~v~HlHlHi~iiPR~~~~ 155 (184)
.+ |||+.+|+ +.|+|+|+|+| ++|++...
T Consensus 91 l~~gYrvv~NnG~~g~QsV~HvH~H--vlgGrqm~ 123 (127)
T KOG3275|consen 91 LEDGYRVVQNNGKDGHQSVYHVHLH--VLGGRQMQ 123 (127)
T ss_pred cccceeEEEcCCcccceEEEEEEEE--EeCCcccC
Confidence 54 69999984 57999999999 99976655
No 10
>PLN02643 ADP-glucose phosphorylase
Probab=99.92 E-value=2.1e-25 Score=193.64 Aligned_cols=120 Identities=15% Similarity=0.187 Sum_probs=107.6
Q ss_pred CCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 030014 47 HENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG 126 (184)
Q Consensus 47 ~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~ 126 (184)
..+.|+||+|+++|. +||||++|+||+|++|.+|||+||+||+|+.++.+|+++|+.+|+++++++.+++++.++..
T Consensus 196 ~~g~Clfcdii~~E~---iV~en~~f~Af~p~ap~~P~evlIiPKrH~~~~~dl~~~e~~~La~ilk~v~~~l~~~~~~~ 272 (336)
T PLN02643 196 KTGKCSLCEVVKKDL---LIDESSHFVSIAPFAATFPFEIWIIPRDHSSNFHEIDDDKAVDLGGLLKLMLQKISKQLNDP 272 (336)
T ss_pred HhCCCcHHHHHhCcc---EEEeCCCEEEEeccccCCCCEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 347899999998876 99999999999999999999999999999999999999999999999999999999999988
Q ss_pred ceEEEEeC-----CCCceeeeEecceeecCCCCCCccccccccCCCccceeeeeee
Q 030014 127 MCQIFYTA-----VTTKLSHSHLPLFFLPSYSLGFLALSCIKSATGWGYFGIVNVI 177 (184)
Q Consensus 127 ~~ni~~n~-----~gq~v~HlHlHi~iiPR~~~~~~~~~~~~~~~~Wg~~~~~n~~ 177 (184)
+||+++|. +++.++|+|||+||+||++. ..+..||....+|++
T Consensus 273 pyN~~~~~~P~~~~~~~~~~~H~hihi~PRl~~--------~aGfElg~g~~in~~ 320 (336)
T PLN02643 273 PYNYMIQTSPLGVEESNLPYTHWFLQIVPQLSG--------VGGFELGTGCYINPV 320 (336)
T ss_pred CceeeeecCCCccccCcccceEEEEEEecCcCC--------ccceeccCCCeeCCC
Confidence 99999982 24577999999999999764 245678888888875
No 11
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional
Probab=99.92 E-value=2.8e-25 Score=193.48 Aligned_cols=154 Identities=8% Similarity=0.019 Sum_probs=114.4
Q ss_pred CCCCCCCCCC--ccc----hhhhhhccCCccc-CCCCCCCeeceeccCCCc--ccEEEECCeEEEEEcCCCCCceEEEEE
Q 030014 19 GPAPCSSSSG--VSA----SFCAQQRLSHSQE-SGHENDCVFCKIIRGESP--AVKLYEYDTCLCILDTNPLSLGHSLIV 89 (184)
Q Consensus 19 ~~~~~~~~~~--~~~----~~c~~~~~~~~~~-~~~~~~C~FC~ii~~e~~--~~iV~E~d~~~af~~~~p~~pGH~LVv 89 (184)
..|.|-+|+| ..+ ++..+.+....+. -...+.|+||+|+++|.+ .++||||++|+||+|++|.+|||+||+
T Consensus 157 ~~GaSl~HPH~Qi~a~p~vP~~~~~e~~~~~~y~~~~g~Clfcdii~~E~~~~~RiV~End~fvAf~p~~p~~P~h~lIi 236 (346)
T PRK11720 157 AMGCSNPHPHGQIWANSFLPNEAEREDRLQRAYFAEHGSPLLVDYVQRELADGERIVVETEHWLAVVPYWAAWPFETLLL 236 (346)
T ss_pred ccCcCCCCCceeeeeCCCCChHHHHHHHHHHHHHHHcCCeEHHHHHHhhhhcCCeEEEECCCEEEEeccccCCCCeEEEe
Confidence 4556667777 333 3333332211121 134478999999999876 599999999999999999999999999
Q ss_pred eCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEeC---C--CCceeeeEecceeecCCC-CCCcccccc
Q 030014 90 PKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG-MCQIFYTA---V--TTKLSHSHLPLFFLPSYS-LGFLALSCI 162 (184)
Q Consensus 90 PKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~-~~ni~~n~---~--gq~v~HlHlHi~iiPR~~-~~~~~~~~~ 162 (184)
||+|+.+|.+|+++++.+|+.+++++++++++.++.+ .||+++|. . ++.+.|+|+| |+||+. .+. ...+
T Consensus 237 PKrH~~~~~dl~dee~~~La~~lk~v~~~l~~~~~~~~pyn~~~h~~p~~~~~~~~~H~Hih--iiPrl~Rs~~--~~k~ 312 (346)
T PRK11720 237 PKAHVLRLTDLTDAQRDDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENDHWQLHAH--FYPPLLRSAT--VRKF 312 (346)
T ss_pred cccCCCChhhCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEEecccCCCCCeeEEEEEE--EeCCccCccc--cccc
Confidence 9999999999999999999999999999999999755 69999982 2 3455555555 999964 221 1233
Q ss_pred ccCCCccceeeeeee
Q 030014 163 KSATGWGYFGIVNVI 177 (184)
Q Consensus 163 ~~~~~Wg~~~~~n~~ 177 (184)
..+..| .+..+|++
T Consensus 313 ~aGfE~-~g~~in~~ 326 (346)
T PRK11720 313 MVGYEM-LAETQRDL 326 (346)
T ss_pred eeeeec-ccCccCCC
Confidence 456667 55577765
No 12
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.
Probab=99.91 E-value=2.6e-24 Score=186.33 Aligned_cols=155 Identities=12% Similarity=0.072 Sum_probs=118.3
Q ss_pred CCCCCCCCCCC--ccc----hhhhhhccCCccc-CCCCCCCeeceeccCCCc--ccEEEECCeEEEEEcCCCCCceEEEE
Q 030014 18 TGPAPCSSSSG--VSA----SFCAQQRLSHSQE-SGHENDCVFCKIIRGESP--AVKLYEYDTCLCILDTNPLSLGHSLI 88 (184)
Q Consensus 18 ~~~~~~~~~~~--~~~----~~c~~~~~~~~~~-~~~~~~C~FC~ii~~e~~--~~iV~E~d~~~af~~~~p~~pGH~LV 88 (184)
..+|.|.+|+| ..+ ++-.+.+....+. -...+.|+||+++++|.+ .++||||++|+||+|++|.+|||+||
T Consensus 146 ~~aGaSl~HpH~Qi~a~~~vp~~~~~e~~~~~~y~~~~g~clfcdii~~E~~~~~riV~end~~va~~p~~~~~P~e~lI 225 (329)
T cd00608 146 AEMGASLPHPHGQIWALPFLPPEVARELRNQKAYYEKHGRCLLCDYLKLELESKERIVVENEHFVAVVPFWARWPFEVHI 225 (329)
T ss_pred cccccCCCCCCeeeeeCCcCChHHHHHHHHHHHHHHHcCCccHHHHHHhhhhcCCeEEEeCCCEEEEEecCCCCCcEEEE
Confidence 34567778888 333 2222222211111 234478999999999876 79999999999999999999999999
Q ss_pred EeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCceEEEEeC---C----CCceeeeEecceeecCCCCCCcccc
Q 030014 89 VPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD-AGMCQIFYTA---V----TTKLSHSHLPLFFLPSYSLGFLALS 160 (184)
Q Consensus 89 vPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~-~~~~ni~~n~---~----gq~v~HlHlHi~iiPR~~~~~~~~~ 160 (184)
+||+|+.++.+|+++++.+|+++++++.+++++.++ ..+||+++|. . ++.+.|+|+| |+||+..+.+
T Consensus 226 iPKrH~~~~~dl~~~e~~~La~~l~~v~~~l~~~~~~~~pyn~~~h~~P~~~~~~~~~~~H~Hih--i~Pr~~~~~~--- 300 (329)
T cd00608 226 LPKRHVSRFTDLTDEEREDLAEILKRLLARYDNLFNCSFPYSMGWHQAPTGGKELENWYYHWHFE--IPPRRSATVL--- 300 (329)
T ss_pred ecCCCcCChhHCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeccCCCCCcCCcceEEEEEE--eCCCcCCCce---
Confidence 999999999999999999999999999999999999 6689999972 2 4567777776 9999885543
Q ss_pred ccccCCCccceeeeeee
Q 030014 161 CIKSATGWGYFGIVNVI 177 (184)
Q Consensus 161 ~~~~~~~Wg~~~~~n~~ 177 (184)
.+..+..|+.+..+|.+
T Consensus 301 ~~~aGfE~~~g~~in~~ 317 (329)
T cd00608 301 KFMAGFELGAGEFINDV 317 (329)
T ss_pred eeeEEeeccCCCccCCC
Confidence 23344566665556553
No 13
>cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified in the literacture into three major branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Further sequence analysis reveals several new closely related, yet uncharacterized subgroups.
Probab=99.89 E-value=9e-23 Score=142.91 Aligned_cols=83 Identities=20% Similarity=0.395 Sum_probs=79.4
Q ss_pred EEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeee
Q 030014 66 LYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHS 142 (184)
Q Consensus 66 V~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~Hl 142 (184)
||||++++||+|++|.++||+||+||+|+.++.+|+++++.+++.+++++.+++++.++++++|+++| .+||+++|+
T Consensus 1 ~~e~~~~~a~~~~~p~~~gh~lIipk~H~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~n~g~~~g~~v~H~ 80 (86)
T cd00468 1 VPDDEHSFAFVNLKPAAPGHVLVCPKRHVETLPDLDEALLADLVITAQRVAAELEKHGNVPSLTVFVNDGAAAGQSVPHV 80 (86)
T ss_pred CeecCcEEEEECCCCCCCCcEEEeCchhhCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCccCCCcCCEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999998 378999999
Q ss_pred Eecceeec
Q 030014 143 HLPLFFLP 150 (184)
Q Consensus 143 HlHi~iiP 150 (184)
|+| |+|
T Consensus 81 H~h--iiP 86 (86)
T cd00468 81 HLH--VLP 86 (86)
T ss_pred EEE--eCC
Confidence 998 888
No 14
>KOG3379 consensus Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family [Nucleotide transport and metabolism; General function prediction only]
Probab=99.83 E-value=2.5e-20 Score=140.72 Aligned_cols=105 Identities=17% Similarity=0.233 Sum_probs=93.9
Q ss_pred cccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCc
Q 030014 62 PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTK 138 (184)
Q Consensus 62 ~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~ 138 (184)
+..++|++++.+||.+..|..|||+||.|+|-+..|.||+.+|.++|+..++++.+.|++.++.+.+|+.+. .+||+
T Consensus 16 ~~~VFykT~~sfafvNlkPvvpgHVLv~P~R~vpRl~dLt~~E~aDlF~t~~~v~~~lek~~~~ts~ti~iQDG~~AGQT 95 (150)
T KOG3379|consen 16 PDHVFYKTKHSFAFVNLKPVVPGHVLVSPLRVVPRLTDLTAAETADLFTTVQKVQRVLEKHYNATSLTIAIQDGPEAGQT 95 (150)
T ss_pred cceEEEeccceEEEEeccccccceEEEeccccccccccCCcHHHHHHHHHHHHHHHHHHHHhcccceEEEeccccccCcc
Confidence 468999999999999999999999999999999999999999999999999999999999999999999987 38999
Q ss_pred eeeeEecceeecCCCCCCccc-cccccCCCc
Q 030014 139 LSHSHLPLFFLPSYSLGFLAL-SCIKSATGW 168 (184)
Q Consensus 139 v~HlHlHi~iiPR~~~~~~~~-~~~~~~~~W 168 (184)
|+|+|+| |+||+.+|.-+. ..|..-..|
T Consensus 96 VpHvHvH--IlPR~~gDf~~Nd~IY~~L~~~ 124 (150)
T KOG3379|consen 96 VPHVHVH--ILPRKAGDFGDNDLIYDELDKH 124 (150)
T ss_pred cceeEEE--EccccccccccchHHHHHHHhc
Confidence 9999998 999999886655 444333334
No 15
>PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B.
Probab=99.78 E-value=4.9e-19 Score=132.25 Aligned_cols=98 Identities=26% Similarity=0.454 Sum_probs=77.0
Q ss_pred CCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCC-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC----
Q 030014 50 DCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKS-HFSCLDATPPSVVAAMCAKVPLISNAIMKATD---- 124 (184)
Q Consensus 50 ~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKr-Hv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~---- 124 (184)
+|+||.|.+++.+.+++|||+.+++|.|.+|.++.|+||+||+ |+.++.+|+.+.+.-|..+...+.+.+++.+.
T Consensus 1 ~cif~~i~~~~~~~~vly~d~~~v~~~D~~P~a~~H~LviPk~~~i~sl~~L~~~~~~lL~~m~~~~~~~~~~~~~~~~~ 80 (116)
T PF11969_consen 1 NCIFCIIIRGEEPERVLYEDDDFVVFKDIYPKAPVHLLVIPKDPHIRSLRDLTPEHLPLLERMREVARELLKEEYPGDLD 80 (116)
T ss_dssp HHHHHHHTTSSSGGGESEEETSEEEEE-TT-SCCEEEEEEESSSS-SSGGG--GGGHHHHHHHHHHHHHHHHHHH-TT-E
T ss_pred CccceEeEcCCCCCcEEEEeCCEEEeeCCCCCcCcEEEEEeecCCCCChHHcCHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4999999999999999999999999999999999999999999 99999999998887666665556566666653
Q ss_pred CCceEEEEeCCCCceeeeEecceeec
Q 030014 125 AGMCQIFYTAVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 125 ~~~~ni~~n~~gq~v~HlHlHi~iiP 150 (184)
...++++++. .++++|+|+| ++.
T Consensus 81 ~~~~~~gfH~-~PS~~HLHlH--vi~ 103 (116)
T PF11969_consen 81 SDDIRLGFHY-PPSVYHLHLH--VIS 103 (116)
T ss_dssp GGGEEEEEES-S-SSSS-EEE--EEE
T ss_pred hhhhcccccC-CCCcceEEEE--Ecc
Confidence 4579999983 4599999999 555
No 16
>KOG4359 consensus Protein kinase C inhibitor-like protein [General function prediction only]
Probab=99.65 E-value=6.1e-16 Score=117.41 Aligned_cols=132 Identities=22% Similarity=0.376 Sum_probs=96.4
Q ss_pred CCCCCCCccchhhhhhccCCcccCCCCCCCeeceeccCCCc--ccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCC
Q 030014 22 PCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESP--AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDA 99 (184)
Q Consensus 22 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~FC~ii~~e~~--~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~d 99 (184)
|+.+.--.+..-|..++- ++.....|.||+|+..+.+ .-...|++.+++|.|++|.+.-|.|++||+|+.+..+
T Consensus 8 ~~~~~~~~si~~c~~~e~----~~~~~~~C~FCDia~r~~~~~ell~~En~~~V~fkDikPaA~~HYLvipK~Hi~~~~~ 83 (166)
T KOG4359|consen 8 PTAETTVSSVGTCEAAEK----SPEPKSTCVFCDIAGRQDPGTELLHCENEDLVCFKDIKPAATHHYLVVPKKHIGNCRT 83 (166)
T ss_pred ccceEEEEEEeeeecccc----ccCCCCceEEEEeecccCCCCceeEecCCcEEEEecCCccccceEEEechHHcCChhh
Confidence 333333344455655543 2456668999999975443 3567899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHcC--CCceEEEEe-CCCCceeeeEecceeecCCCCCCcc
Q 030014 100 TPPSVVAAMCAKVPLISNAIMKATD--AGMCQIFYT-AVTTKLSHSHLPLFFLPSYSLGFLA 158 (184)
Q Consensus 100 L~~ee~~~L~~~l~~v~~~l~~~~~--~~~~ni~~n-~~gq~v~HlHlHi~iiPR~~~~~~~ 158 (184)
|+.++..-+-+.++.-...+++... ++...++++ +...+|.|+|+|+ |.|...+...+
T Consensus 84 L~k~~V~Lve~m~~~G~~~l~r~~~td~~~~r~GFHLPPf~SV~HLHlH~-I~P~~DMgf~s 144 (166)
T KOG4359|consen 84 LRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHLPPFCSVSHLHLHV-IAPVDDMGFLS 144 (166)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhccCCchheeEeccCCCcceeeeeeEee-ecchHHhchhh
Confidence 9999877443344444444555443 456888888 7789999999996 78876665444
No 17
>COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion]
Probab=99.61 E-value=9.5e-16 Score=132.37 Aligned_cols=133 Identities=15% Similarity=0.181 Sum_probs=105.1
Q ss_pred CCCCCCCCCCC--ccch----hhhhhccCCccc-CCCCCCCeeceeccCCCc--ccEEEECCeEEEEEcCCCCCceEEEE
Q 030014 18 TGPAPCSSSSG--VSAS----FCAQQRLSHSQE-SGHENDCVFCKIIRGESP--AVKLYEYDTCLCILDTNPLSLGHSLI 88 (184)
Q Consensus 18 ~~~~~~~~~~~--~~~~----~c~~~~~~~~~~-~~~~~~C~FC~ii~~e~~--~~iV~E~d~~~af~~~~p~~pGH~LV 88 (184)
+.+|.|.+|+| +.|. .=.+.+...++. -...+.|.||++++.|.. .|+|+|+++|+||+++++.+|.+++|
T Consensus 147 k~~G~S~~HPH~Qi~a~~~~P~~v~~e~~~~~~y~~~~~~~~~~~~ve~E~~~~~R~v~e~~~~~a~~Pf~a~~pfEv~i 226 (338)
T COG1085 147 KAAGASLPHPHGQIVALPVLPLEVARELRSAREYYEENGSCMYCDLVEREKGDGERIVVENDHFLAFVPFWARWPFEVLI 226 (338)
T ss_pred cccCccCCCCCcceeecccCChHHHHHHHHHHHHHHhcCCchHHHHHHHHhccCceEEecCceeEEeccccccCceEEEe
Confidence 45667788888 4442 111111101111 236789999999987764 59999999999999999999999999
Q ss_pred EeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEeC--CCCceeeeEecceeec
Q 030014 89 VPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG-MCQIFYTA--VTTKLSHSHLPLFFLP 150 (184)
Q Consensus 89 vPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~-~~ni~~n~--~gq~v~HlHlHi~iiP 150 (184)
.||+|+..+.+|++++..+|+.+++.+..++.+.++.. .|+++++. ......|+|+|++++|
T Consensus 227 ~pk~hv~~l~~~sdee~~~lA~ilk~~~~~y~~~~~~~fpY~m~~h~ap~~~~~~~~~~h~~~~p 291 (338)
T COG1085 227 YPKEHVSFLTDLSDEELKDLAEILKKLLARYDNLFGNSFPYSMGFHQAPFNEVNEHYHLHAEIYP 291 (338)
T ss_pred ccHHHhhhhhhCCHHHHHHHHHHHHHHHHHHhhccCCCCceeeeeecCCCCcccccceEEEEEcc
Confidence 99999999999999999999999999999999999876 79999872 2344567888888999
No 18
>PF02744 GalP_UDP_tr_C: Galactose-1-phosphate uridyl transferase, C-terminal domain; InterPro: IPR005850 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism. The enzyme is present in prokaryotes and eukaryotes. Defects in GalT in humans is the cause of galactosemia, an inherited disorder of galactose metabolism that leads to jaundice, cataracts and mental retardation. This domain describes the C-terminal of Galactose-1-phosphate uridyl transferase. SCOP reports fold duplication of the C-terminal with the N-terminal domain. Both are involved in Zn and Fe binding; GO: 0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity, 0006012 galactose metabolic process; PDB: 1GUP_C 1HXP_A 1HXQ_A 1GUQ_C.
Probab=99.60 E-value=2.4e-15 Score=118.91 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=66.4
Q ss_pred CCCeeceeccCCC--cccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-C
Q 030014 49 NDCVFCKIIRGES--PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD-A 125 (184)
Q Consensus 49 ~~C~FC~ii~~e~--~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~-~ 125 (184)
+.|+||++++-|. ..|+|+++++|++|.+....+|..++|+||||+.+|.+|+++|..+|+.+++.++.++++.|+ +
T Consensus 13 Gs~L~~D~~~~E~~~~~Riv~en~~f~a~vP~~a~wP~ev~ilpkrh~~~l~~l~~~E~~dlA~~l~~i~~r~d~lf~~~ 92 (166)
T PF02744_consen 13 GSCLFCDHLQMELAEGERIVYENEHFVAFVPFAARWPFEVWILPKRHVPSLADLTDEERDDLAAILKPILRRYDNLFETS 92 (166)
T ss_dssp SS-HHHHHHHHHHHH-TTEEEE-SSEEEE--TT--STT-EEEEESS--SSGGG--HHHHHHHHHHHHHHHHHHHHHCTS-
T ss_pred CCchHHHHHHHhhcCCCEEEEECCceEEEEECcccCCcEEEEecCCChhhHHHhhhHHHhhHHHHHHHHHHHhcccCCCC
Confidence 8899999998654 359999999999999999999999999999999999999999999999999999999999998 4
Q ss_pred CceEEEEe
Q 030014 126 GMCQIFYT 133 (184)
Q Consensus 126 ~~~ni~~n 133 (184)
..|+++++
T Consensus 93 ~pY~m~ih 100 (166)
T PF02744_consen 93 FPYNMGIH 100 (166)
T ss_dssp --EEEEEE
T ss_pred CCCchhhh
Confidence 68999997
No 19
>KOG2958 consensus Galactose-1-phosphate uridylyltransferase [Energy production and conversion]
Probab=99.32 E-value=2.2e-12 Score=108.79 Aligned_cols=105 Identities=12% Similarity=0.167 Sum_probs=85.5
Q ss_pred CCCCCCeeceeccCCC--cccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHc
Q 030014 46 GHENDCVFCKIIRGES--PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKAT 123 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~--~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~ 123 (184)
+..+.|.+-+.++-|. +.+||.|+++|+++.|++..+|+.+||+||||+.+|.+|++.+..+|+.+++.+..++++.|
T Consensus 196 e~hgk~ll~dy~~~E~l~Kervv~enehfivvvPywA~wPfEtllipk~h~~~~~~l~~~~k~dLasiLK~ll~Kydnlf 275 (354)
T KOG2958|consen 196 EEHGKCLLMDYVKQEALEKERVVVENEHFIVVVPYWATWPFETLLIPKRHVSRFHELDEVEKVDLASILKLLLIKYDNLF 275 (354)
T ss_pred HHcCCchHHHHHHHHHhhhceEEeecCceEEEeehhhcCcceeeeechhhhhhhcccchHHHhhHHHHHHHHHHHHHHhh
Confidence 4567899944443332 45999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CceEEEEeC------CCCceeeeEecceeecC
Q 030014 124 DA-GMCQIFYTA------VTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 124 ~~-~~~ni~~n~------~gq~v~HlHlHi~iiPR 151 (184)
.. -.|+++++. .+.--.|+ +|+|++|.
T Consensus 276 etsfPYsmg~h~aPl~~t~~e~~n~W-~h~hFypp 309 (354)
T KOG2958|consen 276 ETSFPYSMGIHGAPLGSTEQENYNHW-LHMHFYPP 309 (354)
T ss_pred ccCCccccccccCCcccccccccchh-hhhhcccc
Confidence 87 589999972 11223454 44457773
No 20
>PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues. Cwf19 is part of the Cdc5p complex involved in mRNA splicing []. This domain is found in association with IPR006767 from INTERPRO, which is generally C-terminal and adjacent to this domain.
Probab=99.14 E-value=1.2e-09 Score=82.20 Aligned_cols=103 Identities=20% Similarity=0.338 Sum_probs=75.2
Q ss_pred CCCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 030014 45 SGHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD 124 (184)
Q Consensus 45 ~~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~ 124 (184)
+...++|.||--...-....||.-++++++.++..|..+||++|+|-.|+.++.+++++.++|+.+..+.+.+.. +..|
T Consensus 7 ~~~~~~C~fCl~n~~~~khliisiG~~~YLalpkg~L~~gH~lIvPi~H~~s~~~~de~~~~Ei~~f~~~L~~mf-~~~~ 85 (121)
T PF04677_consen 7 NKAPDNCWFCLSNPNVEKHLIISIGDEVYLALPKGPLVPGHCLIVPIQHVPSLTELDEEVWEEIRNFQKSLRKMF-ASQG 85 (121)
T ss_pred CCCCCCCCCccCCCCccceEEEEEcCcEEEEeCCCCccCCEEEEEecceecccccCCHHHHHHHHHHHHHHHHHH-HHcC
Confidence 456788999974322224579999999999999999999999999999999999999999999887555555444 3344
Q ss_pred CCceEEEEeCCCCceeeeEecceeecCC
Q 030014 125 AGMCQIFYTAVTTKLSHSHLPLFFLPSY 152 (184)
Q Consensus 125 ~~~~ni~~n~~gq~v~HlHlHi~iiPR~ 152 (184)
.+- +++-.......|+|++ +||--
T Consensus 86 ~~v--vf~E~~~~~~~H~~iq--~vPvp 109 (121)
T PF04677_consen 86 KDV--VFFERVRKRNPHTHIQ--CVPVP 109 (121)
T ss_pred CCE--EEEEEeCCCCcEEEEE--EEEcC
Confidence 432 2221124456777776 77743
No 21
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.55 E-value=1.1e-06 Score=78.56 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=70.4
Q ss_pred CCCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 030014 45 SGHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD 124 (184)
Q Consensus 45 ~~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~ 124 (184)
....+.|+||=-...-....||.-+++|++-+++.|.+.+|+||+|-.|+.++..|++|.+.+|-+ -+...+.+.+..|
T Consensus 315 ~~~pg~CwFCLSnP~vEkHLIVsIG~~~YlAlaKGpLs~~HvlIipi~H~p~~~~ls~ev~~Ei~k-ykaal~~myk~~g 393 (528)
T KOG2476|consen 315 KIPPGSCWFCLSNPNVEKHLIVSIGNHFYLALAKGPLSSDHVLIIPIEHIPSLVPLSAEVTQEINK-YKAALRKMYKKQG 393 (528)
T ss_pred CCCCCceEEEecCCChhhheEEEecceeEEeecCCCCCCCeEEEEEcccccccccCCHHHHHHHHH-HHHHHHHHHHhcC
Confidence 467789999975433334579999999999999999999999999999999999999877766543 2333333444444
Q ss_pred CCceEEEEeCCCCceeeeEecceeecC
Q 030014 125 AGMCQIFYTAVTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 125 ~~~~ni~~n~~gq~v~HlHlHi~iiPR 151 (184)
.+-+-+-.. ....-|+|+. +||-
T Consensus 394 ~~~vvfE~~--~~rs~Hlq~Q--vipv 416 (528)
T KOG2476|consen 394 KDAVVFERQ--SYRSVHLQLQ--VIPV 416 (528)
T ss_pred CeEEEEEee--cccceeeEEE--EEec
Confidence 443333221 1123366665 7764
No 22
>KOG0562 consensus Predicted hydrolase (HIT family) [General function prediction only]
Probab=98.35 E-value=6.1e-07 Score=70.41 Aligned_cols=103 Identities=15% Similarity=0.251 Sum_probs=74.2
Q ss_pred cccEEEEC-CeEEEEEcCCCCCceEEEEEeCC-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC----ceEEEEeCC
Q 030014 62 PAVKLYEY-DTCLCILDTNPLSLGHSLIVPKS-HFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG----MCQIFYTAV 135 (184)
Q Consensus 62 ~~~iV~E~-d~~~af~~~~p~~pGH~LVvPKr-Hv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~----~~ni~~n~~ 135 (184)
+.+++.|. |.++++.|.+|.+..|+||+||+ -++++..+..+.+. +.+.+..+...+...++.+ .|++|++ +
T Consensus 14 ~e~V~~es~d~vvvIrD~fPKa~~H~LvLpr~s~i~~l~~~~qe~l~-ll~~~h~~~~~~v~~~~~~~~~~~f~vG~H-a 91 (184)
T KOG0562|consen 14 PENVYIESPDDVVVIRDKFPKARMHLLVLPRRSSIDSLFSVVQEHLS-LLKEDHAVGPCWVDQLTNEALCNYFRVGFH-A 91 (184)
T ss_pred cceeeccCcccEEEEcccCccceeEEEEecccchhHHHHHHHHHHhh-HhHHHhhcCchHHHHhcchhhhhheeeeec-c
Confidence 34555566 79999999999999999999964 45666666656554 5566666665666666544 5788887 4
Q ss_pred CCceeeeEecceeecCCCCCCccccccccCCCcccee
Q 030014 136 TTKLSHSHLPLFFLPSYSLGFLALSCIKSATGWGYFG 172 (184)
Q Consensus 136 gq~v~HlHlHi~iiPR~~~~~~~~~~~~~~~~Wg~~~ 172 (184)
+.+..++|+| ||-. .|...+.++.+.|..|.
T Consensus 92 vPSM~~LHLH--VISk----Df~S~sLKNKKHwnSFn 122 (184)
T KOG0562|consen 92 VPSMNNLHLH--VISK----DFVSPSLKNKKHWNSFN 122 (184)
T ss_pred CcchhheeEE--Eeec----ccCCchhccchhhcccC
Confidence 5688899998 7764 24445677788999886
No 23
>PLN03103 GDP-L-galactose-hexose-1-phosphate guanyltransferase; Provisional
Probab=97.65 E-value=0.00015 Score=64.60 Aligned_cols=71 Identities=14% Similarity=0.296 Sum_probs=47.6
Q ss_pred ECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeC--CCCceeeeEec
Q 030014 68 EYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTA--VTTKLSHSHLP 145 (184)
Q Consensus 68 E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~--~gq~v~HlHlH 145 (184)
++....++.+.+|+.+||+|+||+.--.--.-++.+-+. ++..+....+...|.+++|. +..+++|+|+|
T Consensus 167 ~~s~~~VlINvsPI~~gH~LlvP~~~~~lPQ~i~~~~l~--------la~~~a~~~~~p~frvgYNSlGA~ASvNHLHFQ 238 (403)
T PLN03103 167 SNSPNVVAINVSPIEYGHVLLVPRVLDCLPQRIDPDSFL--------LALYMAAEANNPYFRVGYNSLGAFATINHLHFQ 238 (403)
T ss_pred CCCccEEEEeCCCCccCeEEEcCCcccCCCeEecHHHHH--------HHHHHHHhcCCCcEEEEecCCccccCcceeeee
Confidence 355568899999999999999986622222334443322 22233334456789999994 44599999999
Q ss_pred c
Q 030014 146 L 146 (184)
Q Consensus 146 i 146 (184)
.
T Consensus 239 a 239 (403)
T PLN03103 239 A 239 (403)
T ss_pred e
Confidence 4
No 24
>KOG2477 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.00053 Score=62.42 Aligned_cols=103 Identities=13% Similarity=0.072 Sum_probs=69.7
Q ss_pred CCCCCeeceeccCCCcccEEEECCeEEEEEc-CCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 47 HENDCVFCKIIRGESPAVKLYEYDTCLCILD-TNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 47 ~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~-~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
..++|++|---.......||-=....|+.++ ..++..||++|+|-.|..+-..|++++|+++-...+-++... ...+-
T Consensus 405 ~lD~C~rCfds~klpkhlviSlg~~tYLsLp~~~gL~~gHciIvptqH~~~t~slDEdvWDEIrnfrKcL~~Mf-as~n~ 483 (628)
T KOG2477|consen 405 VLDTCPRCFDSEKLPKHLVISLGHRTYLSLPTQPGLAKGHCIIVPTQHRINTLSLDEDVWDEIRNFRKCLALMF-ASMNL 483 (628)
T ss_pred HhhhchhhhcccccccceeEEeccceeEeccccCccccCceEEecccccccccccchHHHHHHHHHHHHHHHHH-HhcCC
Confidence 4578999975444334567777777776666 455899999999999999999999999999876665444333 33333
Q ss_pred CceEEEEeCCCCceeeeEecceeecCC
Q 030014 126 GMCQIFYTAVTTKLSHSHLPLFFLPSY 152 (184)
Q Consensus 126 ~~~ni~~n~~gq~v~HlHlHi~iiPR~ 152 (184)
+-+-+-....-+.-+|+-+| .||--
T Consensus 484 dviFyE~a~~l~rrpH~~Ie--CIPvp 508 (628)
T KOG2477|consen 484 DVIFYENAPSLQRRPHTAIE--CIPVP 508 (628)
T ss_pred CeEEEeccCccccCCceeEE--Eeech
Confidence 32211111233567888887 78853
No 25
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.
Probab=97.14 E-value=0.0025 Score=55.41 Aligned_cols=66 Identities=17% Similarity=0.210 Sum_probs=46.1
Q ss_pred EEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeec
Q 030014 85 HSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 85 H~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiP 150 (184)
.++|...+|..++.+++.+++.+++.+.+.-...+.+.-+..-+.++.| .+|.|.+|-|..|...|
T Consensus 95 eVii~sp~H~~~l~~~~~~~i~~v~~~~~~r~~~l~~~~~~~yv~if~N~G~~aGaSl~HpH~Qi~a~~ 163 (329)
T cd00608 95 EVICFSPDHNLTLAEMSVAEIREVVEAWAERTRELGKNPRIKYVQIFENKGAEMGASLPHPHGQIWALP 163 (329)
T ss_pred EEEEECCcccCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeecCcccccCCCCCCeeeeeCC
Confidence 6788889999999999999988777766555554443222222334445 47899999999854444
No 26
>KOG2720 consensus Predicted hydrolase (HIT family) [General function prediction only]
Probab=97.12 E-value=0.00047 Score=60.15 Aligned_cols=71 Identities=18% Similarity=0.428 Sum_probs=49.6
Q ss_pred EEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeC--CCCceeeeEecceeec
Q 030014 73 LCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTA--VTTKLSHSHLPLFFLP 150 (184)
Q Consensus 73 ~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~--~gq~v~HlHlHi~iiP 150 (184)
+|..+..|+..||+||+|+----.-.-++-+.+. ++-.+....+.+.|.+++|. +..+|.|+|+|.--.|
T Consensus 169 vvaIN~sPie~~H~LiiP~V~kc~pQrit~~al~--------lav~~m~~~dd~~frlgyNSlga~AsVNHLHfha~y~p 240 (431)
T KOG2720|consen 169 VVAINVSPIEYGHVLIIPRVLKCLPQRITHKALL--------LAVTMMAEADDPYFRLGYNSLGAFASVNHLHFHAYYLP 240 (431)
T ss_pred eEEEecCccccCcEEEecchhccCcceeeHHHHH--------HHHHHHHhcCCchhheecccchhhhhhhhhhhhhhhcc
Confidence 6778899999999999998644333444433322 33445555667789999984 4569999999965555
Q ss_pred C
Q 030014 151 S 151 (184)
Q Consensus 151 R 151 (184)
.
T Consensus 241 ~ 241 (431)
T KOG2720|consen 241 M 241 (431)
T ss_pred c
Confidence 3
No 27
>KOG3969 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.0078 Score=51.17 Aligned_cols=88 Identities=14% Similarity=0.119 Sum_probs=63.0
Q ss_pred cccEEEECC----eEEEEEcCC----CCCceEEEEEeCCc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC--CceEE
Q 030014 62 PAVKLYEYD----TCLCILDTN----PLSLGHSLIVPKSH-FSCLDATPPSVVAAMCAKVPLISNAIMKATDA--GMCQI 130 (184)
Q Consensus 62 ~~~iV~E~d----~~~af~~~~----p~~pGH~LVvPKrH-v~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~--~~~ni 130 (184)
..+||||+. .|+++.|.. ..-.-|+|.|-+|+ +.++.||+++.+.-|..+-+++..++...||. +...+
T Consensus 159 ~driV~ed~d~~nGFillPDlKWdgqtld~LyllaIvhr~dikSiRDL~~~h~~lL~n~r~k~~~~i~~~y~v~~dqlrm 238 (310)
T KOG3969|consen 159 DDRIVYEDPDPENGFILLPDLKWDGQTLDSLYLLAIVHRRDIKSIRDLRPSHLQLLRNIRNKSREAIPQRYGVDPDQLRM 238 (310)
T ss_pred ccceEEecCCCcCCeEEccccccCcccccceeEEEEEecCCcchhhhCCHHHHHHHHHHHHHHHHHHHHHhCCCchhEEE
Confidence 358899875 356665532 23445677666655 89999999999998888888888888888874 56777
Q ss_pred EEeCCCCceeeeEecceeecCC
Q 030014 131 FYTAVTTKLSHSHLPLFFLPSY 152 (184)
Q Consensus 131 ~~n~~gq~v~HlHlHi~iiPR~ 152 (184)
+++- -.+..|+|+| |++-.
T Consensus 239 f~HY-qPSyYHlHVH--i~nik 257 (310)
T KOG3969|consen 239 FFHY-QPSYYHLHVH--IVNIK 257 (310)
T ss_pred EEEe-cCceEEEEEE--EEecc
Confidence 7761 2366777777 88843
No 28
>PLN02643 ADP-glucose phosphorylase
Probab=96.69 E-value=0.017 Score=50.63 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=46.5
Q ss_pred eEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeec
Q 030014 84 GHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 84 GH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiP 150 (184)
-.++|..-+|..++.+|+.+++..++++.+.-...|++.-+..-+.++.| .+|.+.+|-|--|.-+|
T Consensus 108 ~eVii~sp~H~~~l~~~~~~~i~~v~~~~~~r~~~l~~~~~i~yv~iF~N~G~~aGaSl~HPH~Qi~a~~ 177 (336)
T PLN02643 108 HDVVIETPVHSVQLSDLPARHIGEVLKAYKKRINQLQSDSRFKYVQVFKNHGASAGASMSHSHSQIIALP 177 (336)
T ss_pred EEEEEeCCccCCChHHCCHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeecCccCCcCCCCCceeeEecC
Confidence 46788889999999999999998887765555444433322333344446 47899999998854444
No 29
>COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion]
Probab=96.62 E-value=0.015 Score=50.85 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=52.5
Q ss_pred EEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeecCC
Q 030014 85 HSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLPSY 152 (184)
Q Consensus 85 H~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiPR~ 152 (184)
.++|....|-.++.+|+.+++.++..+.+...+.|.+.-...-+.++.| +.|.|.+|.|.-|-.+|..
T Consensus 96 ~VIvesp~H~~~l~~~~~~~~~~vv~~~~e~~~~L~~~~~~~yV~iF~N~Gk~~G~S~~HPH~Qi~a~~~~ 166 (338)
T COG1085 96 RVIVESPDHSKTLPELPVEEIEEVVKLWQERVRELYEREKYKYVQIFENKGKAAGASLPHPHGQIVALPVL 166 (338)
T ss_pred EEEEECCcccCccccCCHHHHHHHHHHHHHHHHHHhhccCcceEEeeeccCcccCccCCCCCcceeecccC
Confidence 4666678899999999999999999888887777777654444555556 4689999999987666653
No 30
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional
Probab=96.17 E-value=0.041 Score=48.42 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=48.0
Q ss_pred eEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeec
Q 030014 84 GHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 84 GH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiP 150 (184)
-.++|...+|..+|.+|+.+++..++++.+.-...|.+. ..-+.++-| .+|.+.+|-|--|.-.|
T Consensus 106 ~eViv~sp~H~~~l~~~~~~~i~~v~~~~~~r~~~l~~~--i~yv~iF~N~G~~~GaSl~HPH~Qi~a~p 173 (346)
T PRK11720 106 SRVICFSPDHSKTLPELSVAALREVVDTWQEQTAELGKT--YPWVQVFENKGAAMGCSNPHPHGQIWANS 173 (346)
T ss_pred EEEEEECCCcCCChhHCCHHHHHHHHHHHHHHHHHHHhC--CcEEEEEeecCcccCcCCCCCceeeeeCC
Confidence 467888899999999999999998888777766666554 333334445 47899999998754444
No 31
>TIGR00672 cdh CDP-diacylglycerol pyrophosphatase, bacterial type. Alternate names for this enzyme include CDP-diglyceride hydrolase and CDP-diacylglycerol hydrolase.
Probab=96.03 E-value=0.029 Score=47.19 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=60.7
Q ss_pred CCCeeceeccCC-CcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCC---CCHHHHHHHHHHHHHHHHHHHHHcC
Q 030014 49 NDCVFCKIIRGE-SPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDA---TPPSVVAAMCAKVPLISNAIMKATD 124 (184)
Q Consensus 49 ~~C~FC~ii~~e-~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~d---L~~ee~~~L~~~l~~v~~~l~~~~~ 124 (184)
..|+.-+-.++. .|...|.....++++.|. ..|.|.|++|-..++-+++ +++. -..++.........+.+.+|
T Consensus 39 ~qCvp~~~~~~~p~PC~~Vd~~~gyvvlKD~--~Gp~qyLLmPt~rIsGIEsP~Ll~~~-tpnyf~~AW~aR~~v~~~~g 115 (250)
T TIGR00672 39 EECLPNQQQNQNPSPCAEVKPNAGYVVLKDL--NGPLQYLLMPTYRINGTESPLLLDPS-TPNFFWLAWQARDFMSKKYG 115 (250)
T ss_pred hhcCCchhccCCCCCcceEcCCCCeEEEeCC--CCCceeEEeeccccCCccChhhcCCC-CccHHHHHHHHhHHHHHhcC
Confidence 446665544433 245566667888888887 5788999999998877642 1221 11233333334444555554
Q ss_pred ----CCceEEEEeC-CCCceeeeEecce
Q 030014 125 ----AGMCQIFYTA-VTTKLSHSHLPLF 147 (184)
Q Consensus 125 ----~~~~ni~~n~-~gq~v~HlHlHi~ 147 (184)
.+.+.+.+|+ .|.+-+|+|+||-
T Consensus 116 ~pipd~~lsLaINS~~gRSQnQLHIHIs 143 (250)
T TIGR00672 116 QPIPDRAVSLAINSRTGRSQNHFHIHIS 143 (250)
T ss_pred CCCChhheeEEecCCCCcccccceeeHh
Confidence 4568888884 6889999999953
No 32
>PRK05471 CDP-diacylglycerol pyrophosphatase; Provisional
Probab=95.65 E-value=0.052 Score=45.68 Aligned_cols=97 Identities=11% Similarity=0.145 Sum_probs=59.9
Q ss_pred CCCeeceeccCCC-cccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCC---CC---HHHHHHHHHHHHHHHHHHHH
Q 030014 49 NDCVFCKIIRGES-PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDA---TP---PSVVAAMCAKVPLISNAIMK 121 (184)
Q Consensus 49 ~~C~FC~ii~~e~-~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~d---L~---~ee~~~L~~~l~~v~~~l~~ 121 (184)
..|+.-+-.++.. |...|.....++++.|. ..|.|.|++|-..++-+++ ++ +.-+.+-++.=..+.+++.+
T Consensus 40 ~qCvp~~~~~~~p~PC~~Vd~~~gyvvlKD~--~Gp~qyLLiPt~rIsGIEsP~Ll~~~tpnyf~~AW~aR~~v~~~~g~ 117 (252)
T PRK05471 40 EQCLPNQQQNQNPAPCAEVDPQAGYVLLKDR--NGPLQYLLMPTYRISGIESPLLLEPSTPNYFALAWQARDFMSKKYGK 117 (252)
T ss_pred hhcCCchhccCCCCCCeeEccCCCeEEEecC--CCCcceEEeecccccCccCccccCCCCccHHHHHHHHhHHHHHhhCC
Confidence 4466655444332 45566667778888754 4778999999998876643 22 23333223222234444444
Q ss_pred HcCCCceEEEEeC-CCCceeeeEecce
Q 030014 122 ATDAGMCQIFYTA-VTTKLSHSHLPLF 147 (184)
Q Consensus 122 ~~~~~~~ni~~n~-~gq~v~HlHlHi~ 147 (184)
.+..+.+.+.+|+ .|.+-+++|+||-
T Consensus 118 pipd~~lsLaINS~~gRSQnQLHIHIs 144 (252)
T PRK05471 118 PIPDSAVSLAINSRYGRTQDQLHIHIS 144 (252)
T ss_pred CCChhheEEEecCCCCccccceeeehh
Confidence 4444578888884 6889999999953
No 33
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1. This enzyme is involved in glucose and galactose interconversion. This model describes one of two extremely distantly related branches of the model pfam01087 from PFAM.
Probab=95.05 E-value=0.23 Score=43.77 Aligned_cols=65 Identities=14% Similarity=0.122 Sum_probs=47.1
Q ss_pred eEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeec
Q 030014 84 GHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 84 GH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiP 150 (184)
-.++|-.-+|-.++.+|+.+++..++++.+.-...|.+ +..-+.++-| .+|.+.+|-|--|.-+|
T Consensus 106 ~eVii~sp~H~~~l~~m~~~~i~~v~~~~~~r~~~l~~--~i~yv~iF~N~G~~~GaSl~HPH~Qi~a~p 173 (347)
T TIGR00209 106 SRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGK--TYPWVQIFENKGAAMGCSNPHPHGQIWANS 173 (347)
T ss_pred EEEEEeCCCccCChhHCCHHHHHHHHHHHHHHHHHHHh--CCcEEEEEeecCcccCcCCCCCceeeeeCC
Confidence 46788889999999999999999888877776666652 2222333335 47899999998743334
No 34
>PF02611 CDH: CDP-diacylglycerol pyrophosphatase; InterPro: IPR003763 The CDP-diacylglycerol pyrophosphatases 3.6.1.26 from EC play a role in the regulation of phospholipid metabolism by inositol, as well as regulating the cellular levels of phosphatidylinositol [].; GO: 0008715 CDP-diacylglycerol diphosphatase activity, 0008654 phospholipid biosynthetic process, 0016020 membrane; PDB: 2POF_A.
Probab=94.32 E-value=0.12 Score=42.74 Aligned_cols=83 Identities=11% Similarity=0.122 Sum_probs=42.4
Q ss_pred ccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCC------CHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeC-C
Q 030014 63 AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDAT------PPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTA-V 135 (184)
Q Consensus 63 ~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL------~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~-~ 135 (184)
...|-....++++.| +..+.|.|++|-..++-+++- ++.-+.+-++.=..+.+++.+.+..+.+.+.+|+ .
T Consensus 26 C~~Vd~~~gyvvlKd--~~G~~qyLL~Pt~rIsGIEsP~Ll~~~~pNyf~~AW~aR~~v~~~~g~~lpd~~lsLaINS~~ 103 (222)
T PF02611_consen 26 CAQVDLQQGYVVLKD--RNGPLQYLLMPTDRISGIESPALLEPRTPNYFADAWQARGFVSQKLGKPLPDDDLSLAINSQY 103 (222)
T ss_dssp SSEEETTTTEEEEE---SSSSS-EEEEESS---STT-GGGGSTTS--HHHHHHHTTHHHHHHHTS---GGGEEEEEB-GG
T ss_pred CeEEcCCCCEEEEeC--CCCCccEEEeeccccCCccChhhcCCCCccHHHHHHHhhHHHHHhcCCCCCccceEEEecCcc
Confidence 344555667777776 456889999999988776432 2233333332223455555555556788999984 6
Q ss_pred CCceeeeEecce
Q 030014 136 TTKLSHSHLPLF 147 (184)
Q Consensus 136 gq~v~HlHlHi~ 147 (184)
|.+-+++|+||-
T Consensus 104 gRsQdQLHIHis 115 (222)
T PF02611_consen 104 GRSQDQLHIHIS 115 (222)
T ss_dssp G-S--S--EEEE
T ss_pred CccccceEeEhh
Confidence 788999999953
No 35
>COG2134 Cdh CDP-diacylglycerol pyrophosphatase [Lipid metabolism]
Probab=91.43 E-value=0.58 Score=38.55 Aligned_cols=82 Identities=9% Similarity=0.078 Sum_probs=47.5
Q ss_pred EEECCeEEEEEcCCCCCceEEEEEeCCccCCCCC---CCHHHHHHHHHHHHHHHHHHHHHcCC----CceEEEEeC-CCC
Q 030014 66 LYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDA---TPPSVVAAMCAKVPLISNAIMKATDA----GMCQIFYTA-VTT 137 (184)
Q Consensus 66 V~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~d---L~~ee~~~L~~~l~~v~~~l~~~~~~----~~~ni~~n~-~gq 137 (184)
|-+...+.++.|.+ .|.-.|++|--++..+.+ +++..- -++.........+.+.+|. ..+.+.+|+ .|.
T Consensus 58 V~~~AG~av~Kd~~--gPlQyLLmPt~rItGiEsP~L~e~atp-Nyf~~AWqAR~fms~kyg~~ipd~dvsLaINs~~gR 134 (252)
T COG2134 58 VKPQAGYAVLKDRN--GPLQYLLMPTARITGIESPLLLEPATP-NYFYLAWQARDFMSKKYGNPIPDSDVSLAINSKNGR 134 (252)
T ss_pred ecCCCceEEEeccC--CCceeEeeeeecccCCcChhhcCCCCc-cHHHHHHHHHHHHHHHhCCCCCccceEEEecCccCc
Confidence 34444455555544 345668999888876543 111111 1223333445555566653 467778874 578
Q ss_pred ceeeeEecceeec
Q 030014 138 KLSHSHLPLFFLP 150 (184)
Q Consensus 138 ~v~HlHlHi~iiP 150 (184)
+-+|+|+||-.+-
T Consensus 135 tQdqlHIHISCis 147 (252)
T COG2134 135 TQDQLHIHISCIS 147 (252)
T ss_pred cccceEEEEEecC
Confidence 8999999975554
No 36
>COG5075 Uncharacterized conserved protein [Function unknown]
Probab=89.35 E-value=0.71 Score=38.92 Aligned_cols=87 Identities=9% Similarity=0.044 Sum_probs=52.8
Q ss_pred CcccEEEECCeE----EEEEcCC----CCCceEEEEEeCC-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CCceE
Q 030014 61 SPAVKLYEYDTC----LCILDTN----PLSLGHSLIVPKS-HFSCLDATPPSVVAAMCAKVPLISNAIMKATD--AGMCQ 129 (184)
Q Consensus 61 ~~~~iV~E~d~~----~af~~~~----p~~pGH~LVvPKr-Hv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~--~~~~n 129 (184)
...+|||||... +++.|.. -...-|+++|-++ -+.++.||....+.-|..+-.++...+...|+ ++...
T Consensus 153 e~erivyed~~~~ngfiiiPD~KWd~qt~dsL~l~aIv~~~diktiRDlr~~~i~~l~rl~~kiltevp~~f~vd~n~l~ 232 (305)
T COG5075 153 ENERIVYEDESVINGFIIIPDMKWDGQTVDSLYLVAIVYRTDIKTIRDLRYYHILWLIRLNNKILTEVPYQFGVDPNELR 232 (305)
T ss_pred ccceeEecCcccccCceeccccccCccceeeeeEEEEEecCCchhhhhCchhhhhHHHhhcccceEecchhcCcChhHeE
Confidence 346899999864 4454421 1233456655555 58899999998877565555555544444454 34556
Q ss_pred EEEeCCCCceeeeEecceeec
Q 030014 130 IFYTAVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 130 i~~n~~gq~v~HlHlHi~iiP 150 (184)
++++ -..+..|+|+| |+=
T Consensus 233 mfvH-Y~PsYyhlHvH--I~n 250 (305)
T COG5075 233 MFVH-YQPSYYHLHVH--IVN 250 (305)
T ss_pred EEEE-eccceEEEEEE--EEe
Confidence 6665 12367788887 554
No 37
>COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism]
Probab=87.64 E-value=0.65 Score=39.12 Aligned_cols=68 Identities=22% Similarity=0.255 Sum_probs=44.3
Q ss_pred eEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecce
Q 030014 71 TCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLF 147 (184)
Q Consensus 71 ~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~ 147 (184)
....++++.|..+.|+|||.++--..=+.|+..++....+.+ .+.++. +++| .+|.+-+|=|+.
T Consensus 93 th~~llNKF~VVdeHlLiVTrefedQ~s~LTl~Df~ta~~vL----------~~ldgl-vFYNsGp~aGaSq~HkHLQ-- 159 (298)
T COG4360 93 THKLLLNKFPVVDEHLLIVTREFEDQESALTLADFTTAYAVL----------CGLDGL-VFYNSGPIAGASQDHKHLQ-- 159 (298)
T ss_pred hHhhhhhcCCcccceeEEeehhhhhccccCCHHHHHHHHHHH----------hcccce-EEecCCCCcCcCCCcccee--
Confidence 445678999999999999999854444556666554322221 233442 3344 268889999987
Q ss_pred eecC
Q 030014 148 FLPS 151 (184)
Q Consensus 148 iiPR 151 (184)
++|.
T Consensus 160 i~pm 163 (298)
T COG4360 160 IVPM 163 (298)
T ss_pred Eeec
Confidence 7774
No 38
>PF01844 HNH: HNH endonuclease; InterPro: IPR002711 HNH endonuclease is found in bacteria and viruses [, , ]. This family includes pyocins, colicins and anaredoxins.; GO: 0003676 nucleic acid binding, 0004519 endonuclease activity; PDB: 2QGP_C.
Probab=86.77 E-value=0.45 Score=28.79 Aligned_cols=32 Identities=9% Similarity=0.253 Sum_probs=23.4
Q ss_pred eeEeecccccCCCCCCCCCCC--ccchhhhhhcc
Q 030014 8 LAVLSSHLLPTGPAPCSSSSG--VSASFCAQQRL 39 (184)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~ 39 (184)
..+.++|++|...++..+.++ .+|..|++...
T Consensus 12 ~~~~v~Hi~~~~~gg~~~~~Nl~~lC~~Ch~~k~ 45 (47)
T PF01844_consen 12 ESLHVHHIIPRSKGGKNDLENLILLCPSCHRKKH 45 (47)
T ss_dssp -GEEEEESS-TTTT---STTTEEEEEHHHHHHHH
T ss_pred cceEeECcCchhcCCCCCHHHHHHHhHHHHHHhc
Confidence 468899999988899999999 99999988643
No 39
>PRK11295 hypothetical protein; Provisional
Probab=77.68 E-value=1.1 Score=33.32 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=26.5
Q ss_pred eeeEeecccccCCCCCCCCCCC--ccchhhhhhcc
Q 030014 7 RLAVLSSHLLPTGPAPCSSSSG--VSASFCAQQRL 39 (184)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~ 39 (184)
..|++|+|++|...+..++.+| .+|.+|--...
T Consensus 39 ~~a~vVDHIip~~~gd~~D~sNLQ~LC~~CHn~kh 73 (113)
T PRK11295 39 LRELTVHHIDHDHDNNPEDGSNWELLCLYCHDHEH 73 (113)
T ss_pred CCCceeeccCCCCCCCCCchhHHHHHhHHHHhHHH
Confidence 3588999999977777777788 99999976643
No 40
>smart00507 HNHc HNH nucleases.
Probab=77.38 E-value=1.4 Score=26.43 Aligned_cols=27 Identities=11% Similarity=0.267 Sum_probs=22.1
Q ss_pred eEeecccccCCCCCCCCCCC--ccchhhh
Q 030014 9 AVLSSHLLPTGPAPCSSSSG--VSASFCA 35 (184)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~~~c~ 35 (184)
++.++|+.|...+++.+.++ .+|..|+
T Consensus 23 ~~~v~Hi~p~~~~~~~~~~Nl~~~c~~ch 51 (52)
T smart00507 23 GLEVDHIIPLSDGGNDDLDNLVLLCPKCH 51 (52)
T ss_pred CeEEEecCChhcCCCCChHhCeecChhhC
Confidence 68999999988888877777 7777775
No 41
>cd00085 HNHc HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.
Probab=76.58 E-value=0.8 Score=28.11 Aligned_cols=30 Identities=10% Similarity=0.241 Sum_probs=24.7
Q ss_pred eeEeecccccCCCCCCCCCCC--ccchhhhhh
Q 030014 8 LAVLSSHLLPTGPAPCSSSSG--VSASFCAQQ 37 (184)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~ 37 (184)
-.+.++|++|...++..+.++ .+|..|+..
T Consensus 24 ~~~~v~Hi~p~~~~~~~~~~Nl~~~c~~ch~~ 55 (57)
T cd00085 24 EGLEVDHIIPLSDGGNNDLDNLVLLCRKCHRK 55 (57)
T ss_pred CCceEEeecchhhCCCCchHHhHHHHHHHhhc
Confidence 467899999988888888888 888888765
No 42
>PF13395 HNH_4: HNH endonuclease
Probab=74.42 E-value=2.1 Score=27.25 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=24.8
Q ss_pred EeecccccCCCCCCCCCCC--ccchhhhhhcc
Q 030014 10 VLSSHLLPTGPAPCSSSSG--VSASFCAQQRL 39 (184)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~ 39 (184)
..++|++|..-++.++..+ ..|.-||+.+.
T Consensus 18 ~~iDHiiP~s~~~~~s~~Nlvl~~~~~N~~K~ 49 (54)
T PF13395_consen 18 YEIDHIIPRSRGGDDSFWNLVLCCKECNRSKG 49 (54)
T ss_pred ceeEEEecccccCCCCcchhheECHHHhhccc
Confidence 5789999999888888888 66788888755
No 43
>PF01087 GalP_UDP_transf: Galactose-1-phosphate uridyl transferase, N-terminal domain; InterPro: IPR005849 Galactose-1-phosphate uridyl transferase catalyses the conversion of UDP-glucose and alpha-D-galactose 1-phosphate to alpha-D-glucose 1-phosphate and UDP-galactose during galactose metabolism. The enzyme is present in prokaryotes and eukaryotes. Defects in GalT in humans is the cause of galactosemia, an inherited disorder of galactose metabolism that leads to jaundice, cataracts and mental retardation. This domain describes the C-terminal of Galactose-1-phosphate uridyl transferase. SCOP reports fold duplication of the C-terminal with the N-terminal domain. Both are involved in Zn and Fe binding; GO: 0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity, 0006012 galactose metabolic process; PDB: 1GUP_C 1HXP_A 1HXQ_A 1GUQ_C 1Z84_B 1ZWJ_A 2Q4L_A 2H39_B 2Q4H_A.
Probab=73.76 E-value=7.6 Score=30.83 Aligned_cols=61 Identities=13% Similarity=0.081 Sum_probs=35.8
Q ss_pred EEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEec
Q 030014 85 HSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLP 145 (184)
Q Consensus 85 H~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlH 145 (184)
.++|-.-+|-.+|.+|+.++...++.+.+.-...|.+.-.+.-+.++-| .+|.+..|-|--
T Consensus 112 EViIe~p~h~~~~~~~~~~~~~~i~~a~~~r~~~l~~~~~~~yv~~FeN~G~~~GaSl~HpHsQ 175 (183)
T PF01087_consen 112 EVIIESPKHERTLADMSVKEIKEILKAWRDRYRELSSDKYIKYVLIFENEGYEAGASLPHPHSQ 175 (183)
T ss_dssp EEEES-SSTT--GGGS-HHHHHHHHHHHHHHHHHHCT-TT-SEEEEEEEESGGGT-SSSSSEEE
T ss_pred EEEEeCCCCCCChhhCCHHHHHHHHHHHHHHHHHHhccCCcceEEEEEecCCcCCCCCCCCceE
Confidence 6777778899999999999988777665544444433333333333345 367888888875
No 44
>PF14317 YcxB: YcxB-like protein
Probab=70.35 E-value=10 Score=23.47 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=24.9
Q ss_pred cEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHH
Q 030014 64 VKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKV 112 (184)
Q Consensus 64 ~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l 112 (184)
.-|.|++..+++.- .+...+++||+- +++++.+++.+.+
T Consensus 23 ~~v~e~~~~~~l~~----~~~~~~~iPk~~------f~~~e~~~f~~~l 61 (62)
T PF14317_consen 23 KKVVETKDYFYLYL----GKNQAFIIPKRA------FSEEEKEEFREFL 61 (62)
T ss_pred EEEEEeCCEEEEEE----CCCeEEEEEHHH------CCHhHHHHHHHHh
Confidence 35777777666533 345789999984 3466666665543
No 45
>PF03432 Relaxase: Relaxase/Mobilisation nuclease domain ; InterPro: IPR005094 Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalysing trans-esterification [].
Probab=69.01 E-value=8.2 Score=31.22 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=21.0
Q ss_pred HHHHHHHHcCCCc--eEEEEeCCCCceeeeEecceeecCCCCC
Q 030014 115 ISNAIMKATDAGM--CQIFYTAVTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 115 v~~~l~~~~~~~~--~ni~~n~~gq~v~HlHlHi~iiPR~~~~ 155 (184)
++..+.+.++++. |-++.|. .-.|.|+|| +++|...+
T Consensus 77 ~~~~~~~~~~~~~~~~v~~~H~---D~~h~H~Hi-vin~v~~~ 115 (242)
T PF03432_consen 77 IAREFAEEMGPGNHQYVVVVHT---DTDHPHVHI-VINRVDLD 115 (242)
T ss_pred HHHHHHHHcCCCCcceEEEECC---CcCeeeeeE-EEeecccc
Confidence 4444445556643 4444443 245777775 88887644
No 46
>PF01076 Mob_Pre: Plasmid recombination enzyme; InterPro: IPR001668 With some plasmids, recombination can occur in a site specific manner that is independent of RecA. In such cases, the recombination event requires another protein called Pre. Pre is a plasmid recombination enzyme. This protein is also known as Mob (conjugative mobilisation) [].; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005727 extrachromosomal circular DNA
Probab=68.37 E-value=17 Score=29.11 Aligned_cols=52 Identities=10% Similarity=0.046 Sum_probs=34.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCC-ceEEEEeCCCCceeeeEecceeecCCCCC
Q 030014 98 DATPPSVVAAMCAKVPLISNAIMKATDAG-MCQIFYTAVTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 98 ~dL~~ee~~~L~~~l~~v~~~l~~~~~~~-~~ni~~n~~gq~v~HlHlHi~iiPR~~~~ 155 (184)
.++++++..+ .++.....+.+.+|.+ -++..++. -.+.||+|+- ++|...+.
T Consensus 93 ~~~~~e~~~~---~~~~~~~~~~~r~g~~ni~~a~vH~-DE~tPH~H~~--~vP~~~~~ 145 (196)
T PF01076_consen 93 NDLDPEQQKR---WFEDSLEWLQERYGNENIVSAVVHL-DETTPHMHFD--VVPIDEDG 145 (196)
T ss_pred cchhhHHHHH---HHHHHHHHHHHHCCchhEEEEEEEC-CCCCcceEEE--Eeeccccc
Confidence 4566666554 4456777888889854 45555552 3568888886 99987664
No 47
>PF11296 DUF3097: Protein of unknown function (DUF3097); InterPro: IPR021447 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=66.96 E-value=3.3 Score=34.91 Aligned_cols=15 Identities=60% Similarity=1.012 Sum_probs=14.0
Q ss_pred CCcceeeEeeccccc
Q 030014 3 TPKRRLAVLSSHLLP 17 (184)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (184)
+|+||+.||+|||.|
T Consensus 156 ~p~RR~GVLvDHLV~ 170 (275)
T PF11296_consen 156 GPGRRLGVLVDHLVP 170 (275)
T ss_pred CCCceeEeeeecccC
Confidence 589999999999997
No 48
>KOG2958 consensus Galactose-1-phosphate uridylyltransferase [Energy production and conversion]
Probab=64.98 E-value=37 Score=29.61 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=33.6
Q ss_pred CccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEE---e---CCCCceeeeEec
Q 030014 92 SHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFY---T---AVTTKLSHSHLP 145 (184)
Q Consensus 92 rHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~---n---~~gq~v~HlHlH 145 (184)
-|--++.+++..++.++.++-+.+...|.+ .+.|++.+ | +.|.+.+|-|=-
T Consensus 117 nh~ltLp~m~~~~i~~vv~aw~~~~~~l~~---h~~y~yvQIFeNkGa~mGcSn~HpHgQ 173 (354)
T KOG2958|consen 117 NHNLTLPLMDVVEIRDVVDAWKKLYNELGQ---HDSYKYVQIFENKGAAMGCSNPHPHGQ 173 (354)
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHhcc---cCCcceeeeeccCCcccccCCCCcccc
Confidence 344557889999888777766655555443 45666654 4 358888888754
No 49
>TIGR03793 TOMM_pelo TOMM propeptide domain. This model represents a domain that is conserved among a large number of putative thiazole/oxazole-modified microcins (TOMM). Oddly, most of this seqence region appears homologous to nitrile hydratase subunits. This family is expanded especially in Pelotomaculum thermopropionicum SI.
Probab=41.24 E-value=67 Score=22.09 Aligned_cols=23 Identities=13% Similarity=0.034 Sum_probs=18.6
Q ss_pred ceEEEEEeCCccCCCCCCCHHHHHHH
Q 030014 83 LGHSLIVPKSHFSCLDATPPSVVAAM 108 (184)
Q Consensus 83 pGH~LVvPKrHv~~l~dL~~ee~~~L 108 (184)
.-|.||+|.+--. +|++++++++
T Consensus 52 ~~~~lVlP~~P~~---~lse~~L~~v 74 (77)
T TIGR03793 52 TVLYLVLPVNPDI---ELTDEQLDAV 74 (77)
T ss_pred CeEEEEecCCCCC---CCCHHHHHHh
Confidence 3388999999876 8999998765
No 50
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=40.37 E-value=35 Score=26.04 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=25.2
Q ss_pred CccCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 030014 92 SHFSCLDATPPSVVAAMCAKVPLISNAIMKA 122 (184)
Q Consensus 92 rHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~ 122 (184)
||+-++.||+.+|+..|++....+.+..++.
T Consensus 1 r~~l~~~dls~~ei~~ll~~A~~lk~~~~~~ 31 (142)
T PF02729_consen 1 RHLLSIKDLSPEEIEALLDLAKELKAAPKKG 31 (142)
T ss_dssp SEBSSGGGS-HHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcCchhhCCHHHHHHHHHHHHHHHhhhhcC
Confidence 6888999999999999999888777776655
No 51
>PF03389 MobA_MobL: MobA/MobL family; InterPro: IPR005053 This entry represents a domain found at the N terminus of MobA in Escherichia coli, and MobL in Thiobacillus ferrooxidans (Acidithiobacillus ferrooxidans), as well as in conjugal transfer protein TraA. MobA and MobL are mobilisation proteins, which are essential for specific plasmid transfer.; GO: 0009291 unidirectional conjugation; PDB: 2NS6_A.
Probab=40.35 E-value=77 Score=25.88 Aligned_cols=46 Identities=4% Similarity=-0.001 Sum_probs=25.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCc--eEEEEeCCCCceeeeEecceeecCCC
Q 030014 99 ATPPSVVAAMCAKVPLISNAIMKATDAGM--CQIFYTAVTTKLSHSHLPLFFLPSYS 153 (184)
Q Consensus 99 dL~~ee~~~L~~~l~~v~~~l~~~~~~~~--~ni~~n~~gq~v~HlHlHi~iiPR~~ 153 (184)
+|+.++..+| +...+++.+...| +.+.++..+..-+|+|+ ++....
T Consensus 78 EL~~eq~~~L------~~~f~~~~~~~~G~~~d~aIH~d~~~NpHaHi---m~t~R~ 125 (216)
T PF03389_consen 78 ELTLEQNIEL------VREFAQENFVDYGMAADVAIHDDGPRNPHAHI---MFTTRP 125 (216)
T ss_dssp TS-HHHHHHH------HHHHHHHHHTTTT--EEEEEEEETTTEEEEEE---EE--B-
T ss_pred cCCHHHHHHH------HHHHHHHHhhccceEEEEEEecCCCCCCEEEE---EeecCc
Confidence 5888887765 3344455454443 55666644457787777 666443
No 52
>COG1943 Transposase and inactivated derivatives [DNA replication, recombination, and repair]
Probab=36.30 E-value=1.4e+02 Score=22.44 Aligned_cols=60 Identities=18% Similarity=0.146 Sum_probs=30.2
Q ss_pred CCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceeeeEecceeecC
Q 030014 80 PLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 80 p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~HlHlHi~iiPR 151 (184)
+..+.|++++||.-..-| ..+....|.+ +...+.+..+.+-..+.. .-+|+|+-+.+-|+
T Consensus 10 ~~~~yH~v~~~kyRr~vl---~~~~~~~l~~----~l~~~~~~~~~eI~a~~v-----~pdHVHlli~~pp~ 69 (136)
T COG1943 10 YGLKYHFVWVPKYRRKVL---TGEVLNLLRS----ILREVAEQKNFEILAMEV-----MPDHVHLLITLPPK 69 (136)
T ss_pred eCCcEEEEEeccCchHhh---hHhHHHHHHH----HHHHHHHhCCCEEEEEEe-----cCCEEEEEEecCCC
Confidence 456889999998765444 3333333333 333334444433222221 34588885433333
No 53
>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication. SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.
Probab=33.28 E-value=20 Score=26.28 Aligned_cols=15 Identities=33% Similarity=0.917 Sum_probs=11.2
Q ss_pred CcccCCCCCCCeece
Q 030014 41 HSQESGHENDCVFCK 55 (184)
Q Consensus 41 ~~~~~~~~~~C~FC~ 55 (184)
.|+....+++|+||-
T Consensus 92 ~yG~~R~~edClFCl 106 (107)
T PF06156_consen 92 HYGSRRNDEDCLFCL 106 (107)
T ss_pred HhCCcCCCCCCcccC
Confidence 455555789999994
No 54
>TIGR01865 cas_Csn1 CRISPR-associated protein, Csn1 family. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.
Probab=32.60 E-value=13 Score=36.38 Aligned_cols=31 Identities=19% Similarity=0.082 Sum_probs=27.0
Q ss_pred eEeecccccCCCCCCCCCCC--ccchhhhhhcc
Q 030014 9 AVLSSHLLPTGPAPCSSSSG--VSASFCAQQRL 39 (184)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~ 39 (184)
.+.++|++|..-++.++.++ +.|..||+...
T Consensus 601 ~~~iDHIiP~s~~~dds~~N~vl~~~~~N~~K~ 633 (805)
T TIGR01865 601 YYEIDHILPQSRSFDDSISNKVLVLASENQEKG 633 (805)
T ss_pred CCceeeecccccCCCCcHHHHHHHhHHHHhhcc
Confidence 47899999998888888888 78899999876
No 55
>PLN02921 naphthoate synthase
Probab=29.67 E-value=1.2e+02 Score=26.35 Aligned_cols=20 Identities=40% Similarity=0.768 Sum_probs=16.5
Q ss_pred CCCCcceeeEeecccccCCC
Q 030014 1 MGTPKRRLAVLSSHLLPTGP 20 (184)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (184)
|....+|+|.++.|+.|...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (327)
T PLN02921 1 MDAARRRLARVANHLVPSAN 20 (327)
T ss_pred CchhhhHHHHHhcccCcccc
Confidence 56778999999999997444
No 56
>PF13960 DUF4218: Domain of unknown function (DUF4218)
Probab=29.12 E-value=24 Score=26.79 Aligned_cols=34 Identities=6% Similarity=0.031 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEE
Q 030014 99 ATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFY 132 (184)
Q Consensus 99 dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~ 132 (184)
.++.+++.+|-+.+......|+..|++.-+++..
T Consensus 17 vi~~~~l~~L~~~I~~~lc~lE~ifppsffdim~ 50 (128)
T PF13960_consen 17 VIDPDDLDELEEEIVETLCQLEMIFPPSFFDIMV 50 (128)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcchhHhhhhH
Confidence 3677888888888877888899999987666643
No 57
>smart00538 POP4 A domain found in a protein subunit of human RNase MRP and RNase P ribonucleoprotein complexes and archaeal proteins.
Probab=27.34 E-value=1e+02 Score=21.85 Aligned_cols=30 Identities=23% Similarity=0.210 Sum_probs=24.1
Q ss_pred cccEEEECCeEEEEEcCCCCCceEEEEEeCCccC
Q 030014 62 PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFS 95 (184)
Q Consensus 62 ~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~ 95 (184)
.+.+|.|+.+.+++.... +-+.+|||.+..
T Consensus 30 ~GiVv~ET~nt~~I~t~~----~~~~~IpK~~~v 59 (92)
T smart00538 30 EGIVVDETRNTLKIETKE----GRVKTVPKDGAV 59 (92)
T ss_pred EEEEEEeeeeEEEEEeCC----CcEEEEECCCeE
Confidence 357899999999888654 568999999854
No 58
>PF09779 Ima1_N: Ima1 N-terminal domain; InterPro: IPR018617 Members of this family of uncharacterised novel proteins have no known function.
Probab=26.93 E-value=31 Score=26.02 Aligned_cols=31 Identities=23% Similarity=0.467 Sum_probs=22.8
Q ss_pred ccchhhhhhccCCcccCCCCCCCeeceeccC
Q 030014 29 VSASFCAQQRLSHSQESGHENDCVFCKIIRG 59 (184)
Q Consensus 29 ~~~~~c~~~~~~~~~~~~~~~~C~FC~ii~~ 59 (184)
+.|+||+++..--++.....=.|..|.-.+|
T Consensus 1 v~C~fC~~~s~~~~~~~~~~w~C~~C~q~N~ 31 (131)
T PF09779_consen 1 VNCWFCGQNSKVPYDNRNSNWTCPHCEQYNG 31 (131)
T ss_pred CeeccCCCCCCCCCCCCCCeeECCCCCCccC
Confidence 4699999997744555555567999987665
No 59
>PF14394 DUF4423: Domain of unknown function (DUF4423)
Probab=26.51 E-value=1.6e+02 Score=23.12 Aligned_cols=51 Identities=10% Similarity=0.196 Sum_probs=33.8
Q ss_pred CCccCCC-CCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceeeeEecceeec
Q 030014 91 KSHFSCL-DATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHLPLFFLP 150 (184)
Q Consensus 91 KrHv~~l-~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~HlHlHi~iiP 150 (184)
+|++.++ ..++++.+.++.+.++...+.+.+....++ ....|.++-++ ++|
T Consensus 119 ~R~~s~~T~~vs~~~~~ki~~~i~~fRk~i~~i~~~~~-------~~~~Vy~lN~q--lFP 170 (171)
T PF14394_consen 119 ERDFSGLTMSVSREDYEKIKKEIREFRKKIIAIAEEDK-------EPDRVYQLNIQ--LFP 170 (171)
T ss_pred ccceeeeEEEeCHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCCeEEEEEEE--Eec
Confidence 5667666 667888888888877777777666654421 23466666666 666
No 60
>COG2928 Uncharacterized conserved protein [Function unknown]
Probab=25.90 E-value=85 Score=26.10 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=28.1
Q ss_pred CCeEEEEEcCCCC-CceEEEEEeCCccCCCCCCCHHHH
Q 030014 69 YDTCLCILDTNPL-SLGHSLIVPKSHFSCLDATPPSVV 105 (184)
Q Consensus 69 ~d~~~af~~~~p~-~pGH~LVvPKrHv~~l~dL~~ee~ 105 (184)
++.+.||.|..|. +.|.++.+||+.+..+ |++-|+.
T Consensus 152 ~~~v~VfvPTTPNPTsGfl~~Vpkedi~~l-dmtvEda 188 (222)
T COG2928 152 RPMVAVFVPTTPNPTSGFLLLVPKEDIVPL-DMTVEDA 188 (222)
T ss_pred CceEEEEcCCCCCCCcceEEEEEHHHceec-cccHHHH
Confidence 5788899998885 8899999999987643 4565543
No 61
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=25.44 E-value=34 Score=30.63 Aligned_cols=10 Identities=40% Similarity=1.045 Sum_probs=7.5
Q ss_pred CCCCCeecee
Q 030014 47 HENDCVFCKI 56 (184)
Q Consensus 47 ~~~~C~FC~i 56 (184)
..+.|.||+-
T Consensus 455 N~k~CFfCkt 464 (489)
T KOG4692|consen 455 NCKRCFFCKT 464 (489)
T ss_pred cCCeeeEecc
Confidence 4567999983
No 62
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=25.43 E-value=34 Score=30.21 Aligned_cols=43 Identities=12% Similarity=0.277 Sum_probs=30.1
Q ss_pred ccchhhhhhc-cCCcccCCCCCCCeeceeccCCCcccEEEECCe
Q 030014 29 VSASFCAQQR-LSHSQESGHENDCVFCKIIRGESPAVKLYEYDT 71 (184)
Q Consensus 29 ~~~~~c~~~~-~~~~~~~~~~~~C~FC~ii~~e~~~~iV~E~d~ 71 (184)
.-|-.|..+. .-.|.+.-=+.+|.||-.-.......+||.|+.
T Consensus 19 kGC~~C~~G~KlVlFvTG~C~~~CfYCPvs~~r~gkdviyaNEr 62 (353)
T COG2108 19 KGCRLCVLGGKLVLFVTGLCNRSCFYCPVSDERKGKDVIYANER 62 (353)
T ss_pred chhHHHhcCCceEEEEecccCCCcccCcCCHHhcCCcceeeccc
Confidence 4588898883 337777777789999997544333467777664
No 63
>cd01617 DCX Ubiquitin-like domain of DCX. DCX The ubiquitin-like DCX domain is present in tandem within the N-terminal half of the doublecortin protein. Doublecortin is expressed in migrating neurons. Mutations in the gene encoding doublecortin cause lissencephaly in males and 'double-cortex syndrome' in females.
Probab=25.38 E-value=75 Score=21.63 Aligned_cols=28 Identities=21% Similarity=0.446 Sum_probs=23.5
Q ss_pred eEEEEEcCCCCCceEEEEEeCCccCCCC
Q 030014 71 TCLCILDTNPLSLGHSLIVPKSHFSCLD 98 (184)
Q Consensus 71 ~~~af~~~~p~~pGH~LVvPKrHv~~l~ 98 (184)
.+.++.+-.+..+|..++++++.+.+++
T Consensus 2 ~I~~~rNGD~~~~g~~~~i~~~~~~sfd 29 (80)
T cd01617 2 RVVVYRNGDPFFKGVRLLVNRRRFKSFD 29 (80)
T ss_pred EEEEEECCCCCCCCEEEEEChhhhCCHH
Confidence 4567888899999999999999887664
No 64
>TIGR02768 TraA_Ti Ti-type conjugative transfer relaxase TraA. This protein contains domains distinctive of a single strand exonuclease (N-terminus, MobA/MobL, pfam03389) as well as a helicase domain (central region, homologous to the corresponding region of the F-type relaxase TraI, TIGR02760). This protein likely fills the same role as TraI(F), nicking (at the oriT site) and unwinding the coiled plasmid prior to conjugative transfer.
Probab=25.32 E-value=1.4e+02 Score=28.99 Aligned_cols=41 Identities=7% Similarity=-0.104 Sum_probs=25.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCc--eEEEEeCCCCceeeeEec
Q 030014 99 ATPPSVVAAMCAKVPLISNAIMKATDAGM--CQIFYTAVTTKLSHSHLP 145 (184)
Q Consensus 99 dL~~ee~~~L~~~l~~v~~~l~~~~~~~~--~ni~~n~~gq~v~HlHlH 145 (184)
||+.++..+|. ...+++.+...+ +.+.+|..++..||.|+-
T Consensus 95 El~~~~~~~L~------~~f~~~~~~~~g~~~d~aiH~~~~~NpHaHim 137 (744)
T TIGR02768 95 ELNLEQNIELA------RRFVRDHFVEKGMVADWAIHDDGDGNPHAHLL 137 (744)
T ss_pred hcCHHHHHHHH------HHHHHHHHHhCCCeEEEEEecCCCCCCEEEEE
Confidence 68888887663 333444444332 556677567788988883
No 65
>PRK07218 replication factor A; Provisional
Probab=25.10 E-value=1.6e+02 Score=26.75 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=45.8
Q ss_pred ccchhhhhhccCCcccCCCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHH
Q 030014 29 VSASFCAQQRLSHSQESGHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAM 108 (184)
Q Consensus 29 ~~~~~c~~~~~~~~~~~~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L 108 (184)
..||-|++... .+.|..|....++ .+=...+.+|..--+ ...++.++.+..+...+.++..++
T Consensus 298 ~rCP~C~r~v~--------~~~C~~hG~ve~~-------~dlrik~vLDDGtg~--~~~~~~~e~~e~l~G~~~e~a~~~ 360 (423)
T PRK07218 298 ERCPECGRVIQ--------KGQCRSHGAVEGE-------DDLRIKAILDDGTGS--VTVILDRELTEIVYGGTLEDAEEL 360 (423)
T ss_pred ecCcCcccccc--------CCcCCCCCCcCCe-------eeeEEEEEEECCCCe--EEEEEChhhhHhHhCCCHHHHHHH
Confidence 78999988765 2679888865442 222345667776433 667778888889999999887776
Q ss_pred HH
Q 030014 109 CA 110 (184)
Q Consensus 109 ~~ 110 (184)
+.
T Consensus 361 ~~ 362 (423)
T PRK07218 361 AR 362 (423)
T ss_pred HH
Confidence 63
No 66
>smart00537 DCX Domain in the Doublecortin (DCX) gene product. Tandemly-repeated domain in doublin, the Doublecortin gene product. Proposed to bind tubulin. Doublecortin (DCX) is mutated in human X-linked neuronal migration defects.
Probab=24.63 E-value=57 Score=22.78 Aligned_cols=29 Identities=17% Similarity=0.277 Sum_probs=23.8
Q ss_pred eEEEEEcCCCCCceEEEEEeCCccCCCCC
Q 030014 71 TCLCILDTNPLSLGHSLIVPKSHFSCLDA 99 (184)
Q Consensus 71 ~~~af~~~~p~~pGH~LVvPKrHv~~l~d 99 (184)
.+.++.+-.+..+|..++++++.+.+++.
T Consensus 7 ~i~~~rNGD~~~~g~~~~v~~~~~~s~d~ 35 (89)
T smart00537 7 RIRFYRNGDRFFKGVRLVVNRKRFKSFEA 35 (89)
T ss_pred EEEEEeCCCCCCCCEEEEEChhhcCCHHH
Confidence 45677888899999999999998887643
No 67
>PRK03879 ribonuclease P protein component 1; Validated
Probab=23.98 E-value=1.3e+02 Score=21.58 Aligned_cols=29 Identities=24% Similarity=0.243 Sum_probs=23.0
Q ss_pred cccEEEECCeEEEEEcCCCCCceEEEEEeCCccC
Q 030014 62 PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFS 95 (184)
Q Consensus 62 ~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~ 95 (184)
.+.+|.|+.+.+++. ..+-...|||.+..
T Consensus 32 ~GiVv~ETknt~~I~-----~~~~~~~VPK~~~i 60 (96)
T PRK03879 32 KGRVVDETRNTLVIE-----TDGKEWMVPKDGAT 60 (96)
T ss_pred eEEEEEeceeEEEEE-----cCCcEEEEeCCCeE
Confidence 357999999999888 23468899999854
No 68
>COG1403 McrA Restriction endonuclease [Defense mechanisms]
Probab=23.11 E-value=24 Score=25.63 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=25.6
Q ss_pred eEeecccccCCCCCCCCCCC--ccchhhhhhcc
Q 030014 9 AVLSSHLLPTGPAPCSSSSG--VSASFCAQQRL 39 (184)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~ 39 (184)
+..++|++|..-|+.+.-++ .+|..|+....
T Consensus 81 ~~~~dHiip~~~g~~~~~~Nl~~lc~~c~~~k~ 113 (146)
T COG1403 81 DLEVDHIVPLSRGGASAWENLETLCERCHNKKG 113 (146)
T ss_pred CCceeeEeecccCCcchHHHHHHHHHhhccccc
Confidence 78899999988777777766 89999987655
No 69
>PRK13169 DNA replication intiation control protein YabA; Reviewed
Probab=23.10 E-value=31 Score=25.48 Aligned_cols=15 Identities=33% Similarity=0.848 Sum_probs=10.1
Q ss_pred CcccCCCCC-CCeece
Q 030014 41 HSQESGHEN-DCVFCK 55 (184)
Q Consensus 41 ~~~~~~~~~-~C~FC~ 55 (184)
.|+.....+ +|+||-
T Consensus 89 ~yG~~R~~~EdClFCl 104 (110)
T PRK13169 89 HYGSRRENGEDCLFCL 104 (110)
T ss_pred HhCCcCCCCCCcHHHH
Confidence 455544444 899995
No 70
>PF05840 Phage_GPA: Bacteriophage replication gene A protein (GPA); InterPro: IPR008766 Replication gene A proteins (also known as GpA) are found in bacteriophages and in bacteria as part of a suspected prophage. These proteins function as endonucleases during DNA replication [,,].; GO: 0006260 DNA replication
Probab=20.70 E-value=6.1e+02 Score=22.67 Aligned_cols=81 Identities=14% Similarity=0.084 Sum_probs=38.0
Q ss_pred ECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHH-HHHHHHHHHHHHcCCC--ceEEEEeCCCCceeeeEe
Q 030014 68 EYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCA-KVPLISNAIMKATDAG--MCQIFYTAVTTKLSHSHL 144 (184)
Q Consensus 68 E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~-~l~~v~~~l~~~~~~~--~~ni~~n~~gq~v~HlHl 144 (184)
+..++-+|...-....+|-.-.--.-.+.+...++.+..+.+. +=.++.++|.+. +.. |+.+.- +--.+.||+|+
T Consensus 176 ~~G~~g~F~TlT~PSkyHa~~~~G~~n~kw~g~tP~daq~yL~~~W~~~Ra~l~r~-~i~~yG~RV~E-PHhDGTPHWH~ 253 (371)
T PF05840_consen 176 ELGHVGVFITLTAPSKYHATYKNGGFNPKWNGATPRDAQRYLNKVWARIRAALKRR-GIRFYGFRVAE-PHHDGTPHWHL 253 (371)
T ss_pred HCCCeEEEEEecCCccccchhhcCCCccccCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCeeeEEeec-ccCCCCceeee
Confidence 4455566666555556665432111233466667765544433 333333333332 222 233321 22357888888
Q ss_pred cceeecC
Q 030014 145 PLFFLPS 151 (184)
Q Consensus 145 Hi~iiPR 151 (184)
= .++|.
T Consensus 254 L-lf~~~ 259 (371)
T PF05840_consen 254 L-LFMPP 259 (371)
T ss_pred e-eecCH
Confidence 4 34553
No 71
>PHA00330 putative replication initiation protein
Probab=20.03 E-value=3.6e+02 Score=23.61 Aligned_cols=73 Identities=14% Similarity=0.053 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEeCC-CCceeeeEecceeecCCCCCCcccccccc-----------CCCcccee-e
Q 030014 107 AMCAKVPLISNAIMKATDAGMCQIFYTAV-TTKLSHSHLPLFFLPSYSLGFLALSCIKS-----------ATGWGYFG-I 173 (184)
Q Consensus 107 ~L~~~l~~v~~~l~~~~~~~~~ni~~n~~-gq~v~HlHlHi~iiPR~~~~~~~~~~~~~-----------~~~Wg~~~-~ 173 (184)
++-..++++...+++.- ...+.+..-.. ++...-.|+|| |+=....+..+..|+.. ...|+.+. .
T Consensus 105 d~k~FIKRLr~~lkK~~-~~~lKYI~V~EY~~KrgRiH~HI-Iif~~d~d~~E~~~~~~rg~q~y~se~l~~lW~~Gfv~ 182 (316)
T PHA00330 105 HIRLFIKRLREYIDRHY-PHKIKYLGCGEYGDKLQRPHYHL-LIFNYDPDDEKKLLSKKRGNQLYTSEKLMRLWPFGFST 182 (316)
T ss_pred HHHHHHHHHHHHHHhcC-CCCccEEEEeccccccCceEEEE-EecCCCchhHhhhcccccccchhhhHHHHHhccCCcee
Confidence 34456667777776633 34443333222 33333455554 33333333322233322 23688875 5
Q ss_pred eeeeeecc
Q 030014 174 VNVISVMS 181 (184)
Q Consensus 174 ~n~~~~~~ 181 (184)
+|-|..=|
T Consensus 183 i~ki~~~s 190 (316)
T PHA00330 183 VGSVTRQS 190 (316)
T ss_pred eeeccccc
Confidence 55554433
Done!