Query 030014
Match_columns 184
No_of_seqs 181 out of 1311
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 11:18:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l7x_A SMU.412C, putative HIT- 100.0 2.8E-33 9.4E-38 221.4 11.7 136 13-162 12-151 (173)
2 3o0m_A HIT family protein; ssg 100.0 5E-33 1.7E-37 214.5 10.0 111 47-159 3-117 (149)
3 3ksv_A Uncharacterized protein 100.0 9.2E-33 3.1E-37 213.5 10.1 115 46-162 8-126 (149)
4 3imi_A HIT family protein; str 100.0 7.2E-33 2.5E-37 213.2 9.1 115 46-162 6-124 (147)
5 3lb5_A HIT-like protein involv 100.0 2.3E-32 7.7E-37 213.8 10.9 111 46-158 25-138 (161)
6 3p0t_A Uncharacterized protein 100.0 1E-32 3.4E-37 209.9 8.5 110 48-161 4-113 (138)
7 3n1s_A HIT-like protein HINT; 100.0 7.9E-32 2.7E-36 200.7 9.7 107 47-155 1-111 (119)
8 1y23_A HIT, histidine triad pr 100.0 2.6E-31 8.8E-36 203.3 7.3 113 48-162 4-120 (145)
9 4egu_A Histidine triad (HIT) p 100.0 5.1E-31 1.8E-35 195.7 8.6 108 48-157 3-114 (119)
10 2eo4_A 150AA long hypothetical 100.0 1.2E-30 4.2E-35 200.7 9.3 109 51-161 1-114 (149)
11 3oj7_A Putative histidine tria 100.0 1.6E-30 5.5E-35 192.6 9.5 106 47-155 4-113 (117)
12 3o1c_A Histidine triad nucleot 100.0 1.1E-30 3.9E-35 196.1 8.8 108 46-155 12-122 (126)
13 3r6f_A HIT family protein; str 100.0 2.9E-30 9.8E-35 196.0 5.8 109 46-162 3-113 (135)
14 1xqu_A HIT family hydrolase; p 100.0 1.2E-29 4E-34 195.7 8.8 105 46-153 32-141 (147)
15 3ano_A AP-4-A phosphorylase; d 100.0 1.3E-28 4.6E-33 201.0 8.5 106 48-155 68-178 (218)
16 2oik_A Histidine triad (HIT) p 99.9 7.3E-28 2.5E-32 186.3 11.7 103 46-156 7-109 (154)
17 1fit_A FragIle histidine prote 99.9 1.2E-25 4.1E-30 172.4 10.1 100 52-155 4-106 (147)
18 1ems_A Nitfhit, NIT-fragIle hi 99.9 1.9E-24 6.5E-29 191.1 9.9 103 48-155 296-402 (440)
19 1gup_A Galactose-1-phosphate u 99.9 2.2E-24 7.4E-29 186.8 8.5 106 48-155 193-309 (348)
20 1z84_A Galactose-1-phosphate u 99.9 2.9E-24 1E-28 186.2 8.4 102 48-154 213-321 (351)
21 3ohe_A Histidine triad (HIT) p 99.9 6.3E-23 2.2E-27 156.3 11.5 91 63-157 13-103 (137)
22 3i24_A HIT family hydrolase; s 99.9 7.9E-23 2.7E-27 157.9 11.0 90 63-156 13-102 (149)
23 3nrd_A Histidine triad (HIT) p 99.9 4E-21 1.4E-25 145.9 11.4 90 63-157 15-105 (135)
24 3i4s_A Histidine triad protein 99.8 6.7E-20 2.3E-24 141.5 11.4 90 63-157 18-108 (149)
25 3sp4_A Aprataxin-like protein; 99.5 8.6E-15 2.9E-19 117.9 6.7 101 65-172 23-142 (204)
26 3bl9_A Scavenger mRNA-decappin 98.8 1.5E-08 5.3E-13 85.6 9.7 102 51-154 138-251 (301)
27 1vlr_A MRNA decapping enzyme; 98.8 2.4E-08 8E-13 85.8 9.1 102 51-154 185-298 (350)
28 1z84_A Galactose-1-phosphate u 98.7 5.6E-08 1.9E-12 84.0 9.2 103 49-151 61-194 (351)
29 1gup_A Galactose-1-phosphate u 96.4 0.0078 2.7E-07 51.5 7.5 65 85-151 107-174 (348)
30 2pof_A CDP-diacylglycerol pyro 95.0 0.029 9.8E-07 45.4 4.8 83 63-147 31-120 (227)
31 2qgp_A HNH endonuclease; Q39X4 89.7 0.15 5.3E-06 36.5 2.1 31 9-39 49-81 (112)
32 2ns6_A Mobilization protein A; 67.3 16 0.00053 28.2 6.6 62 79-156 68-131 (185)
33 3vg8_G Hypothetical protein TT 63.8 5.5 0.00019 28.4 3.0 26 125-150 76-103 (116)
34 2f5g_A Transposase, putative; 43.7 43 0.0015 23.4 5.2 53 80-144 11-63 (133)
35 3hfn_A ASL2047 protein; HFQ, S 39.2 20 0.00069 23.5 2.5 38 55-96 29-67 (72)
36 3hfo_A SSR3341 protein; HFQ, S 31.4 36 0.0012 22.2 2.7 36 56-95 28-64 (70)
37 4h31_A Otcase, ornithine carba 23.7 71 0.0024 27.0 4.0 30 91-120 31-60 (358)
38 3sds_A Ornithine carbamoyltran 23.6 54 0.0018 27.8 3.2 32 88-119 20-51 (353)
39 2vjv_A Transposase ORFA; DNA-b 23.4 1.4E+02 0.0047 21.7 5.1 52 81-144 20-71 (159)
40 1ts9_A Ribonuclease P protein 23.4 75 0.0026 22.0 3.4 28 62-94 34-61 (102)
41 3cng_A Nudix hydrolase; struct 22.8 67 0.0023 23.6 3.3 66 29-95 4-75 (189)
42 4hbl_A Transcriptional regulat 22.7 1E+02 0.0035 21.4 4.2 28 96-123 120-147 (149)
43 4ekn_B Aspartate carbamoyltran 22.6 81 0.0028 26.1 4.0 29 92-120 2-30 (306)
44 1dxh_A Ornithine carbamoyltran 22.3 1.1E+02 0.0036 25.7 4.7 29 91-119 6-34 (335)
45 3p0t_A Uncharacterized protein 22.1 1.2E+02 0.0041 21.3 4.4 36 79-114 91-132 (138)
46 3qc5_X Platelet binding protei 21.8 1.3E+02 0.0045 25.5 5.1 41 69-114 269-309 (360)
47 3nrv_A Putative transcriptiona 21.7 1.1E+02 0.0037 21.0 4.1 25 97-121 123-147 (148)
48 1lj9_A Transcriptional regulat 21.5 1.1E+02 0.0037 20.9 4.0 26 97-122 112-137 (144)
49 2fbh_A Transcriptional regulat 21.4 96 0.0033 21.1 3.8 24 97-120 121-144 (146)
50 4aik_A Transcriptional regulat 21.2 1.1E+02 0.0036 21.8 4.0 27 97-123 115-141 (151)
51 3bpv_A Transcriptional regulat 20.7 1.2E+02 0.0039 20.5 4.0 25 97-121 112-136 (138)
52 2ef0_A Ornithine carbamoyltran 20.6 99 0.0034 25.5 4.1 28 90-117 8-35 (301)
53 3boq_A Transcriptional regulat 20.3 74 0.0025 22.2 3.0 26 97-122 131-156 (160)
54 1pvv_A Otcase, ornithine carba 20.1 94 0.0032 25.8 3.9 29 91-119 7-35 (315)
No 1
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=100.00 E-value=2.8e-33 Score=221.44 Aligned_cols=136 Identities=30% Similarity=0.556 Sum_probs=118.1
Q ss_pred cccccCCCCCCCCCCCccchhhhhhccCCcccCCCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCC
Q 030014 13 SHLLPTGPAPCSSSSGVSASFCAQQRLSHSQESGHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKS 92 (184)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKr 92 (184)
|=|.|+.+-|++......-. ...|++|+||+|+++|.|.++||||++++||+|++|.+|||+||+||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~------------~~~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkr 79 (173)
T 3l7x_A 12 SGLVPRGSHMASMTGGQQMG------------RGSMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKE 79 (173)
T ss_dssp --CCCCCCTTBCTTSSBCCC-------------CCCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESS
T ss_pred ccceehhhhhhhhccccccc------------CCCCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEecc
Confidence 44567777777776654422 356789999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeecCCC-CCCcccccc
Q 030014 93 HFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLPSYS-LGFLALSCI 162 (184)
Q Consensus 93 Hv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiPR~~-~~~~~~~~~ 162 (184)
|+.++.||+++++.+|+.+++++++++++.+++++||+++| .+||+|+|+|+| ||||+. +++|.+.|.
T Consensus 80 Hv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~g~ni~~n~g~~aGq~V~HlHiH--iIPR~~~d~gf~~~~~ 151 (173)
T 3l7x_A 80 HVRNALEMTQTQAANLFARIPKIARALQKATKADGLNIINNNEETAGQTVFHAHVH--LVPRFADSDEFDIRFV 151 (173)
T ss_dssp CCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCSEEEEEECCSGGGTCCSCSCCEE--EEEECC-CCSCCCCCC
T ss_pred ccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCcccCCCcCEEEEE--EEecccCCCCcccccC
Confidence 99999999999999999999999999999999999999998 368999999998 999999 566665554
No 2
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=100.00 E-value=5e-33 Score=214.51 Aligned_cols=111 Identities=34% Similarity=0.565 Sum_probs=104.8
Q ss_pred CCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCC
Q 030014 47 HENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKA-TDA 125 (184)
Q Consensus 47 ~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~-~~~ 125 (184)
.|++|+||+|+++|.+.++||||++++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++++++++. +++
T Consensus 3 ~m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~ 82 (149)
T 3o0m_A 3 GSMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHA 82 (149)
T ss_dssp CTTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred CCCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4788999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CceEEEEeC---CCCceeeeEecceeecCCCCCCccc
Q 030014 126 GMCQIFYTA---VTTKLSHSHLPLFFLPSYSLGFLAL 159 (184)
Q Consensus 126 ~~~ni~~n~---~gq~v~HlHlHi~iiPR~~~~~~~~ 159 (184)
++||+++|. +||+|+|+|+| ||||+.+|++.+
T Consensus 83 ~~~ni~~n~g~~aGq~v~HlHiH--iiPR~~~d~~~~ 117 (149)
T 3o0m_A 83 DGNNIAINDGKAAFQTVFHIHLH--VVPRRNGDKLSF 117 (149)
T ss_dssp SEEEEECCCSGGGTCCSSSCCEE--EEEECTTCCCCC
T ss_pred CceEEEEecCCCCCCccceEEEE--EECCccCCCccc
Confidence 999999983 68999999998 999999997643
No 3
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.98 E-value=9.2e-33 Score=213.47 Aligned_cols=115 Identities=28% Similarity=0.478 Sum_probs=105.8
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
....+|+||+|++||.|+++||||++++||+|.+|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++
T Consensus 8 ~~~~~~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 87 (149)
T 3ksv_A 8 HMAANCIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGS 87 (149)
T ss_dssp -CCTTCHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred cccccCHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEe---CCCCceeeeEecceeecCCCCC-Ccccccc
Q 030014 126 GMCQIFYT---AVTTKLSHSHLPLFFLPSYSLG-FLALSCI 162 (184)
Q Consensus 126 ~~~ni~~n---~~gq~v~HlHlHi~iiPR~~~~-~~~~~~~ 162 (184)
++||+++| .+||+|+|+|+| |+||+.++ ++.+.|.
T Consensus 88 ~g~ni~~n~g~~aGq~v~HlHiH--iiPR~~~d~g~~~~w~ 126 (149)
T 3ksv_A 88 MQYNVLQNNGSLAHQEVPHVHFH--IIPKTDEKTGLKIGWD 126 (149)
T ss_dssp CEEEEEECCSTTTTCCSSSCCEE--EEEECCTTSSCCCCCC
T ss_pred CCEEEEEecCcccCCCCCEEEEE--EEecccCCCCcccCCC
Confidence 99999998 368999999998 99999974 5655554
No 4
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.98 E-value=7.2e-33 Score=213.17 Aligned_cols=115 Identities=28% Similarity=0.484 Sum_probs=106.6
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
..|++|+||+|+++|.+.++||||++++||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++
T Consensus 6 ~~m~~CifC~i~~~e~~~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~ 85 (147)
T 3imi_A 6 HTADNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNP 85 (147)
T ss_dssp CCGGGCHHHHHHTTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred cccCCCcCcccccCCCcCCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEe---CCCCceeeeEecceeecCCC-CCCcccccc
Q 030014 126 GMCQIFYT---AVTTKLSHSHLPLFFLPSYS-LGFLALSCI 162 (184)
Q Consensus 126 ~~~ni~~n---~~gq~v~HlHlHi~iiPR~~-~~~~~~~~~ 162 (184)
++||+++| .+||+|+|+|+| ||||+. +++|++.|.
T Consensus 86 ~~~ni~~n~g~~aGq~v~HlHiH--iiPR~~~~~~~~~~~~ 124 (147)
T 3imi_A 86 VGFNLLNNNGEKAGQTVFHFHLH--LIPRYGENDGFGAVWK 124 (147)
T ss_dssp SEEEEEEEESGGGTCCSSSCCEE--EEEECSTTCSEEEEEC
T ss_pred CCEEEEEeCCcccCCCcCEEEEE--EeCCccCCCCceeecc
Confidence 99999998 369999999998 999998 466665554
No 5
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.98 E-value=2.3e-32 Score=213.80 Aligned_cols=111 Identities=27% Similarity=0.404 Sum_probs=104.7
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
.++++|+||+|+++|.+.++||||++|+||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++
T Consensus 25 ~~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~ 104 (161)
T 3lb5_A 25 AYDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQA 104 (161)
T ss_dssp CCCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEe---CCCCceeeeEecceeecCCCCCCcc
Q 030014 126 GMCQIFYT---AVTTKLSHSHLPLFFLPSYSLGFLA 158 (184)
Q Consensus 126 ~~~ni~~n---~~gq~v~HlHlHi~iiPR~~~~~~~ 158 (184)
++||+++| .+||+|+|+|+| ||||+.+|++.
T Consensus 105 ~g~ni~~n~g~~aGq~V~HlHiH--iiPR~~~d~~~ 138 (161)
T 3lb5_A 105 DGITVMQFNEAASQQTVYHLHFH--IIPRMEGIELT 138 (161)
T ss_dssp SEEEEEEEESGGGTCCSCSCCEE--EEEECTTCCC-
T ss_pred CCEEEEEecCcccCCCCCEEEEE--EEcccCCCCCC
Confidence 99999998 368999999998 99999999764
No 6
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.97 E-value=1e-32 Score=209.92 Aligned_cols=110 Identities=24% Similarity=0.404 Sum_probs=103.2
Q ss_pred CCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 030014 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGM 127 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~ 127 (184)
.++|+||+|+++|.+.++||||++++||+|.+|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++++
T Consensus 4 ~~~CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~ 83 (138)
T 3p0t_A 4 SMASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTER 83 (138)
T ss_dssp CHHHHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCceeeeEecceeecCCCCCCccccc
Q 030014 128 CQIFYTAVTTKLSHSHLPLFFLPSYSLGFLALSC 161 (184)
Q Consensus 128 ~ni~~n~~gq~v~HlHlHi~iiPR~~~~~~~~~~ 161 (184)
+|+.. +||+|+|+|+| ||||+++|++.+.|
T Consensus 84 ~n~~~--~gq~v~HlH~H--iiPr~~~d~~~~~~ 113 (138)
T 3p0t_A 84 SGLII--AGLEVPHLHVH--VFPTRSLSDFGFAN 113 (138)
T ss_dssp EEEEE--CCSSCSSCCEE--EEEESCGGGSSSTT
T ss_pred CcEEE--CCcccCEEEEE--EeccccCCCCcccC
Confidence 99975 79999999998 99999998776554
No 7
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.97 E-value=7.9e-32 Score=200.68 Aligned_cols=107 Identities=20% Similarity=0.320 Sum_probs=95.2
Q ss_pred CCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHH-HcCC
Q 030014 47 HENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMK-ATDA 125 (184)
Q Consensus 47 ~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~-~~~~ 125 (184)
++++|+||+|+++|.+.++|||||+++||.|.+|.+|||+||+||+|+.++.||+++|..+++++++.+.+.+++ .+++
T Consensus 1 ~~~~CiFC~I~~ge~~~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~ 80 (119)
T 3n1s_A 1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAE 80 (119)
T ss_dssp CCCCCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCCChhhhhhcCCCcCCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 467899999999999999999999999999999999999999999999999999999888787777666555555 4778
Q ss_pred CceEEEEeC---CCCceeeeEecceeecCCCCC
Q 030014 126 GMCQIFYTA---VTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 126 ~~~ni~~n~---~gq~v~HlHlHi~iiPR~~~~ 155 (184)
++||+++|. +||+|+|+|+| ||||++..
T Consensus 81 ~g~ni~~n~g~~agq~V~HlH~H--iipr~~~~ 111 (119)
T 3n1s_A 81 DGYRLIMNTNRHGGQEVYHIHMH--LLGGRPLG 111 (119)
T ss_dssp TCEEEEEEEHHHHTCCSSSCCEE--EEESSCCC
T ss_pred CCeEEEEeCCCCcCCCcCEEEEE--EeCCcccC
Confidence 999999983 69999999998 99998764
No 8
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.97 E-value=2.6e-31 Score=203.25 Aligned_cols=113 Identities=26% Similarity=0.482 Sum_probs=103.9
Q ss_pred CCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 030014 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGM 127 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~ 127 (184)
.++|+||+++++|.+.++||||++++||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++++
T Consensus 4 ~~~C~fC~i~~~e~~~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (145)
T 1y23_A 4 AENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIG 83 (145)
T ss_dssp -CCCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCSE
T ss_pred CCCCcCCccccCCCCCCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEe---CCCCceeeeEecceeecCCCC-CCcccccc
Q 030014 128 CQIFYT---AVTTKLSHSHLPLFFLPSYSL-GFLALSCI 162 (184)
Q Consensus 128 ~ni~~n---~~gq~v~HlHlHi~iiPR~~~-~~~~~~~~ 162 (184)
||+++| .+||+++|+|+| ||||+.+ +++.+.|.
T Consensus 84 ~ni~~n~g~~~g~~v~HlH~H--iiPr~~~~~~~~~~~~ 120 (145)
T 1y23_A 84 LNTLNNNGEKAGQSVFHYHMH--IIPRYGKGDGFGAVWK 120 (145)
T ss_dssp EEEEEEESGGGTCCSSSCCEE--EEEECSTTCSEEEEEC
T ss_pred EEEEEcCCcCCCCCcCEEEEE--EEccccCCCCcccccC
Confidence 999998 368999999998 9999987 55555553
No 9
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.97 E-value=5.1e-31 Score=195.67 Aligned_cols=108 Identities=29% Similarity=0.452 Sum_probs=93.7
Q ss_pred CCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCC
Q 030014 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKA-TDAG 126 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~-~~~~ 126 (184)
+++|+||+|+++|.+.++||||++++||+|.+|.+|||+||+||||+.++.+|+++|+.+|+++++.+.+.+++. ++++
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~ 82 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQT 82 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 467999999999999999999999999999999999999999999999999999998888888887444444432 3478
Q ss_pred ceEEEEe---CCCCceeeeEecceeecCCCCCCc
Q 030014 127 MCQIFYT---AVTTKLSHSHLPLFFLPSYSLGFL 157 (184)
Q Consensus 127 ~~ni~~n---~~gq~v~HlHlHi~iiPR~~~~~~ 157 (184)
+||+++| .+||+++|+|+| ||||++.+.+
T Consensus 83 ~~ni~~n~g~~agq~v~HlH~H--iip~~~~~~~ 114 (119)
T 4egu_A 83 GFRVINNCGSDGGQEVKHLHYH--ILAGKKLPNY 114 (119)
T ss_dssp CEEEEEEETTTTTCCSCSCCEE--EEESSCCCCG
T ss_pred CEEEEEeCCCCCCCCcCEEEEE--EeCCcccCcc
Confidence 9999998 369999999998 9999887644
No 10
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.97 E-value=1.2e-30 Score=200.71 Aligned_cols=109 Identities=29% Similarity=0.508 Sum_probs=102.0
Q ss_pred CeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEE
Q 030014 51 CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQI 130 (184)
Q Consensus 51 C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni 130 (184)
|+||+|+++|.+.++||||+.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++++++++.+++++||+
T Consensus 1 CiFC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni 80 (149)
T 2eo4_A 1 CTFCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLRL 80 (149)
T ss_dssp CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEe---CCCCceeeeEecceeecCCCCCC--ccccc
Q 030014 131 FYT---AVTTKLSHSHLPLFFLPSYSLGF--LALSC 161 (184)
Q Consensus 131 ~~n---~~gq~v~HlHlHi~iiPR~~~~~--~~~~~ 161 (184)
++| .+||+++|+|+| ||||+.+|. +.+.|
T Consensus 81 ~~n~g~~~gq~v~HlHiH--viPr~~~d~~~~~~~~ 114 (149)
T 2eo4_A 81 LTNIGRSAGQVIFHLHVH--IIPTWEGDYPDIFKSF 114 (149)
T ss_dssp ECCCSGGGTCCSCSCCEE--EEEECSSCCCTTSCCC
T ss_pred EEecCcCCCCCcCEEEEE--EECCcCCCCccccccc
Confidence 998 358999999998 999999874 54444
No 11
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.97 E-value=1.6e-30 Score=192.58 Aligned_cols=106 Identities=25% Similarity=0.382 Sum_probs=91.5
Q ss_pred CCCC-CeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 47 HEND-CVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 47 ~~~~-C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
.|.+ |+||+|+++|.+.++|||||+++||+|.+|.+|||+||+||||+.++.||+++|+.+|+++++.+.+.+++.+.
T Consensus 4 ~m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~- 82 (117)
T 3oj7_A 4 SMADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECP- 82 (117)
T ss_dssp -----CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCT-
T ss_pred ccCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 3555 99999999999999999999999999999999999999999999999999999988888888766666665565
Q ss_pred CceEEEEe---CCCCceeeeEecceeecCCCCC
Q 030014 126 GMCQIFYT---AVTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 126 ~~~ni~~n---~~gq~v~HlHlHi~iiPR~~~~ 155 (184)
++||+++| .+||+|+|+|+| ||||++.+
T Consensus 83 ~g~ni~~n~g~~agq~v~H~H~H--iipr~~~~ 113 (117)
T 3oj7_A 83 EGYRVVNNIGEDAGQTVKHIHFH--ILGGKKLA 113 (117)
T ss_dssp TCEEEECCCSTTTTCCSSSCCEE--EEESSCCC
T ss_pred CCeEEEEcCCCCCCeeeeEEEEE--EeCCCCCC
Confidence 49999998 378999999998 99997654
No 12
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.97 E-value=1.1e-30 Score=196.07 Aligned_cols=108 Identities=23% Similarity=0.284 Sum_probs=94.2
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
..+++|+||+|+++|.+.++||||++++||.|.+|.+|||+||+||+|+.++.||++++...|+++++.+.+.+++...+
T Consensus 12 ~~~~~CiFC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~ 91 (126)
T 3o1c_A 12 RPGGDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK 91 (126)
T ss_dssp CTTCSSHHHHHHHTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCCcchhhcCCCcCCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 46788999999999999999999999999999999999999999999999999999999888888776554555544446
Q ss_pred CceEEEEeC---CCCceeeeEecceeecCCCCC
Q 030014 126 GMCQIFYTA---VTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 126 ~~~ni~~n~---~gq~v~HlHlHi~iiPR~~~~ 155 (184)
++||+++|. +||+|+|+|+| ||||.+..
T Consensus 92 ~g~ni~~n~g~~agq~v~HlH~H--iipr~~~~ 122 (126)
T 3o1c_A 92 KGYRMVVNEGSDGGQSVYHVHLH--VLGGRQMN 122 (126)
T ss_dssp TCEEEECCCHHHHTCCSSSCCEE--EEESSCCC
T ss_pred CCeEEEEecCCccCCccCEeEEE--EeCCcccC
Confidence 799999983 59999999998 99997654
No 13
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.96 E-value=2.9e-30 Score=196.01 Aligned_cols=109 Identities=25% Similarity=0.450 Sum_probs=93.7
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
..|++|+||+|++ .+.++||||++++||+|.+|.+|||+||+||+|+.++.||+++++.+|+.++++++++ +++
T Consensus 3 ~~~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~----~~~ 76 (135)
T 3r6f_A 3 GSMEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQK----FGF 76 (135)
T ss_dssp ---CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHH----HTC
T ss_pred CCCCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHH----hCC
Confidence 4578899999997 6789999999999999999999999999999999999999999999999888776654 578
Q ss_pred CceEEEEe-CCCCceeeeEecceeecCCCC-CCcccccc
Q 030014 126 GMCQIFYT-AVTTKLSHSHLPLFFLPSYSL-GFLALSCI 162 (184)
Q Consensus 126 ~~~ni~~n-~~gq~v~HlHlHi~iiPR~~~-~~~~~~~~ 162 (184)
++||+++| +.||+|+|+|+| |+||+.+ +++.+.|.
T Consensus 77 ~~~ni~~n~g~gq~v~HlH~H--iiPR~~~d~g~~~~~~ 113 (135)
T 3r6f_A 77 ERYNILQNNGNHQEVFHVHFH--VIPFVSADERLMINWK 113 (135)
T ss_dssp CSEEEECCSSSSCSSSSCCEE--EEECCBTTBSCCCCCC
T ss_pred CCeEEEEEcCCCCCccEEEEE--EeccccCCCCceecCC
Confidence 89999998 348999999998 9999986 55555454
No 14
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.96 E-value=1.2e-29 Score=195.75 Aligned_cols=105 Identities=26% Similarity=0.395 Sum_probs=91.9
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcC-
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATD- 124 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~- 124 (184)
..|++|+||+|+++|.+.++||||++++||+|++|.+|||+||+||||+.++.||+++|..+|+++++ +++++.+.++
T Consensus 32 ~~m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~-~~~~v~~~~~~ 110 (147)
T 1xqu_A 32 YTLENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHK-AANKVAEDLGI 110 (147)
T ss_dssp --CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHH-HHHHHHHHTTC
T ss_pred hccCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHH-HHHHHHHHhCC
Confidence 34678999999999999999999999999999999999999999999999999999999888888887 5555555555
Q ss_pred -CCceEEEEe---CCCCceeeeEecceeecCCC
Q 030014 125 -AGMCQIFYT---AVTTKLSHSHLPLFFLPSYS 153 (184)
Q Consensus 125 -~~~~ni~~n---~~gq~v~HlHlHi~iiPR~~ 153 (184)
+++||+++| .+||+++|+|+| ||||++
T Consensus 111 ~~~gyni~~n~g~~aGq~v~HlHlH--iiP~~~ 141 (147)
T 1xqu_A 111 AEKGYRLITNCGVAAGQTVFHLHYH--LLGGVD 141 (147)
T ss_dssp TTTCEEEECCCSTTTTCCSCSCCEE--EEESSC
T ss_pred CCCCEEEEEecCcccCCCccEEEEE--EeCCCc
Confidence 579999998 258999999988 999975
No 15
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.3e-28 Score=201.01 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=98.7
Q ss_pred CCCCeeceeccCC-CcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 030014 48 ENDCVFCKIIRGE-SPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG 126 (184)
Q Consensus 48 ~~~C~FC~ii~~e-~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~ 126 (184)
+++|+||+|++++ .+.++|||++.++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++.+++++.++++
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4579999999884 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEe---CCCCce-eeeEecceeecCCCCC
Q 030014 127 MCQIFYT---AVTTKL-SHSHLPLFFLPSYSLG 155 (184)
Q Consensus 127 ~~ni~~n---~~gq~v-~HlHlHi~iiPR~~~~ 155 (184)
+||+++| .+||+| +|+|+| ||||+.++
T Consensus 148 g~ni~~n~G~~aGq~V~~HlHiH--IIPR~~gd 178 (218)
T 3ano_A 148 GFNVGLNLGTSAGGSLAEHLHVH--VVPRWGGD 178 (218)
T ss_dssp EEEEEEEESGGGTCTTTTSCCEE--EEEECTTG
T ss_pred CEEEEEecCcccCCcccCEEEEE--EEcccCCC
Confidence 9999998 368999 999998 99999887
No 16
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.95 E-value=7.3e-28 Score=186.26 Aligned_cols=103 Identities=13% Similarity=0.217 Sum_probs=96.0
Q ss_pred CCCCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 46 GHENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 46 ~~~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
..+++|+||+++ +.++||||++++||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++
T Consensus 7 ~~~~~C~FC~~~----~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~ 82 (154)
T 2oik_A 7 SFHKNCELCTTA----GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRP 82 (154)
T ss_dssp CCCTTCHHHHSC----CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCccCCCC----CCeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456789999854 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeCCCCceeeeEecceeecCCCCCC
Q 030014 126 GMCQIFYTAVTTKLSHSHLPLFFLPSYSLGF 156 (184)
Q Consensus 126 ~~~ni~~n~~gq~v~HlHlHi~iiPR~~~~~ 156 (184)
++||+.. +||+++|+|+| ||||+.+|.
T Consensus 83 ~g~ni~~--~gq~v~HlHiH--iiPr~~~d~ 109 (154)
T 2oik_A 83 DKINLAS--LGNMTPHVHWH--VIPRFKRDR 109 (154)
T ss_dssp SEEEEEE--CCSSSCSCEEE--EEEECTTSS
T ss_pred CcEEhHH--hCCCCCEEEEE--EeCCCCCCC
Confidence 9999984 78999999998 999999774
No 17
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.93 E-value=1.2e-25 Score=172.42 Aligned_cols=100 Identities=16% Similarity=0.277 Sum_probs=91.7
Q ss_pred eeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEE
Q 030014 52 VFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIF 131 (184)
Q Consensus 52 ~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~ 131 (184)
.||.+. ..+.++||||++++||+|++|.+|||+||+||+|+.++.+|+++++.+|+.+++++++++++.+++++||++
T Consensus 4 ~f~~~~--ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~ 81 (147)
T 1fit_A 4 RFGQHL--IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFS 81 (147)
T ss_dssp EETTEE--ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EecCcc--cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 466653 124689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeC---CCCceeeeEecceeecCCCCC
Q 030014 132 YTA---VTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 132 ~n~---~gq~v~HlHlHi~iiPR~~~~ 155 (184)
+|. +||+|+|+|+| ||||+.+|
T Consensus 82 ~n~g~~agq~v~HlH~H--iiPr~~~d 106 (147)
T 1fit_A 82 MQDGPEAGQTVKHVHVH--VLPRKAGD 106 (147)
T ss_dssp ECCSGGGTCCSSSCCEE--EEEECTTC
T ss_pred EecCCccCCCccEEEEE--EECCcCCC
Confidence 983 58999999998 99999987
No 18
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.91 E-value=1.9e-24 Score=191.12 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=96.3
Q ss_pred CCCCeeceeccCCCcc-cEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 030014 48 ENDCVFCKIIRGESPA-VKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAG 126 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~-~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~ 126 (184)
.+.|+||+ +|+|. ++||||++++||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.++++
T Consensus 296 ~~~c~fc~---~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~ 372 (440)
T 1ems_A 296 TGGLKFAR---FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVT 372 (440)
T ss_dssp SSCCEETT---EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cCceeeec---cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 56899998 56665 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEe---CCCCceeeeEecceeecCCCCC
Q 030014 127 MCQIFYT---AVTTKLSHSHLPLFFLPSYSLG 155 (184)
Q Consensus 127 ~~ni~~n---~~gq~v~HlHlHi~iiPR~~~~ 155 (184)
+||+++| .+||+|+|+|+| ||||+.+|
T Consensus 373 ~~n~~~~~g~~~gq~v~HlH~H--iipr~~~d 402 (440)
T 1ems_A 373 STTICVQDGKDAGQTVPHVHIH--ILPRRAGD 402 (440)
T ss_dssp EEEEECCCSGGGTCCSSSCCEE--EEEECSSC
T ss_pred CeEEEEecCCCCCCCccEEEEE--EeCCCCCC
Confidence 9999998 358999999998 99999987
No 19
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=99.90 E-value=2.2e-24 Score=186.78 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=98.0
Q ss_pred CCCCeeceeccCCCcc--cEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 030014 48 ENDCVFCKIIRGESPA--VKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDA 125 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~--~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~ 125 (184)
.++|+||+|+++|.+. ++||||++|+||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++
T Consensus 193 ~~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~ 272 (348)
T 1gup_A 193 QKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQC 272 (348)
T ss_dssp HSSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3689999999998776 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-ceEEEEeC-----CCCceeeeEecceeec---CCCCC
Q 030014 126 G-MCQIFYTA-----VTTKLSHSHLPLFFLP---SYSLG 155 (184)
Q Consensus 126 ~-~~ni~~n~-----~gq~v~HlHlHi~iiP---R~~~~ 155 (184)
+ +||+++|. ++|+++|+|+| |+| |+.++
T Consensus 273 ~~~Yn~g~~~~p~~g~~q~v~HlHiH--iiPpl~R~~~~ 309 (348)
T 1gup_A 273 SFPYSMGWHGAPFNGEENQHWQLHAH--FYPPLLRSATV 309 (348)
T ss_dssp CCCEEEEEECCCSSSSCCTTCCCEEE--EECCBCSSSSC
T ss_pred CCCeEEEEEeCCCCCCCCcccEEEEE--EecchhccCCc
Confidence 7 99999982 24889999988 999 88865
No 20
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=99.90 E-value=2.9e-24 Score=186.24 Aligned_cols=102 Identities=15% Similarity=0.158 Sum_probs=94.2
Q ss_pred CCCCeeceeccCCCcccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCc
Q 030014 48 ENDCVFCKIIRGESPAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGM 127 (184)
Q Consensus 48 ~~~C~FC~ii~~e~~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~ 127 (184)
.++|+||+|+++|. +||||++|+||+|++|.+|||+||+||+|+.++.||+++++.+|+.+++++++++++.+++++
T Consensus 213 ~~~ciFc~ii~~E~---iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~ 289 (351)
T 1z84_A 213 TGKCCLCEAKSKHF---VIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPP 289 (351)
T ss_dssp HSSCTTTTHHHHSE---EEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCHHHHHHhcCe---EEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 36799999998875 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeC---CC----CceeeeEecceeecCCCC
Q 030014 128 CQIFYTA---VT----TKLSHSHLPLFFLPSYSL 154 (184)
Q Consensus 128 ~ni~~n~---~g----q~v~HlHlHi~iiPR~~~ 154 (184)
||+++|. +| |.++|+|+| |+||++.
T Consensus 290 yn~~~n~gp~~g~~~~q~v~HlHiH--iiPR~~~ 321 (351)
T 1z84_A 290 YNYMIHTSPLKVTESQLPYTHWFLQ--IVPQLSG 321 (351)
T ss_dssp EEEEEECCCTTCCGGGGGGCCCEEE--EEECCCC
T ss_pred EEEEEeCCCccCCCCCCccceEEEE--EEccCCC
Confidence 9999983 34 688888887 9999864
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.89 E-value=6.3e-23 Score=156.28 Aligned_cols=91 Identities=15% Similarity=0.092 Sum_probs=86.7
Q ss_pred ccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceeee
Q 030014 63 AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHS 142 (184)
Q Consensus 63 ~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~Hl 142 (184)
..+|+|++.++|+++.+|.+|||+||+||+|+.++.||++++..+++..++++++++++.++++++|++ .+||+|+|+
T Consensus 13 ~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~--~aGq~V~Hl 90 (137)
T 3ohe_A 13 THKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVA--ALGNMVPQL 90 (137)
T ss_dssp EEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE--ECCSSCCSC
T ss_pred cEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe--eccCcCCEE
Confidence 578999999999999999999999999999999999999999999999999999999999999999999 489999999
Q ss_pred EecceeecCCCCCCc
Q 030014 143 HLPLFFLPSYSLGFL 157 (184)
Q Consensus 143 HlHi~iiPR~~~~~~ 157 (184)
|+| |||||.+|..
T Consensus 91 H~H--viPR~~~D~~ 103 (137)
T 3ohe_A 91 HLH--HIVRYQGDPA 103 (137)
T ss_dssp CEE--EEEECTTSTT
T ss_pred EEE--EeCCCCCCCC
Confidence 998 9999998854
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.89 E-value=7.9e-23 Score=157.91 Aligned_cols=90 Identities=7% Similarity=0.077 Sum_probs=86.3
Q ss_pred ccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceeee
Q 030014 63 AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHS 142 (184)
Q Consensus 63 ~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~Hl 142 (184)
..+|+|++.++|+++.+|.+|||+||+||+|+.++.||++++..+++..+++++++|++.++++++|++. +||+|+|+
T Consensus 13 ~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~--aGq~V~Hl 90 (149)
T 3i24_A 13 CIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGA--LGNLVPQL 90 (149)
T ss_dssp EEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEE--CCSSCCSC
T ss_pred CEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhh--hhCCCCEE
Confidence 5799999999999999999999999999999999999999999999999999999999999999999995 89999999
Q ss_pred EecceeecCCCCCC
Q 030014 143 HLPLFFLPSYSLGF 156 (184)
Q Consensus 143 HlHi~iiPR~~~~~ 156 (184)
|+| |||||++|.
T Consensus 91 H~H--vIPR~~~D~ 102 (149)
T 3i24_A 91 HIH--HIARFTTDV 102 (149)
T ss_dssp CEE--EEEECTTST
T ss_pred EEE--EeCCccCCC
Confidence 998 999999885
No 23
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.85 E-value=4e-21 Score=145.88 Aligned_cols=90 Identities=14% Similarity=0.091 Sum_probs=83.3
Q ss_pred ccEEEECCeEEEEEcCCCCCceEEEEEeC-CccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceee
Q 030014 63 AVKLYEYDTCLCILDTNPLSLGHSLIVPK-SHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSH 141 (184)
Q Consensus 63 ~~iV~E~d~~~af~~~~p~~pGH~LVvPK-rHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~H 141 (184)
..+|++++.++|+++.+|.+|| +||||| +|+.++.||++++..+|+..++++++++++.++++++|++. +||+|+|
T Consensus 15 ~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~--aGq~V~H 91 (135)
T 3nrd_A 15 GIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGA--LGNIVRQ 91 (135)
T ss_dssp EEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE--CCSSCCS
T ss_pred CEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee--ccCCCCE
Confidence 4799999999999999999996 577787 79999999999999999999999999999999999999984 8999999
Q ss_pred eEecceeecCCCCCCc
Q 030014 142 SHLPLFFLPSYSLGFL 157 (184)
Q Consensus 142 lHlHi~iiPR~~~~~~ 157 (184)
+|+| |||||.+|..
T Consensus 92 lH~H--viPR~~~D~~ 105 (135)
T 3nrd_A 92 LHVH--VIARREGDPN 105 (135)
T ss_dssp CCEE--EEEECTTSTT
T ss_pred EEEE--EecCCCCCCC
Confidence 9998 9999998863
No 24
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=99.82 E-value=6.7e-20 Score=141.48 Aligned_cols=90 Identities=10% Similarity=0.109 Sum_probs=82.2
Q ss_pred ccEEEECCeEEEEEcCCCCCceEEEEEeCC-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceee
Q 030014 63 AVKLYEYDTCLCILDTNPLSLGHSLIVPKS-HFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSH 141 (184)
Q Consensus 63 ~~iV~E~d~~~af~~~~p~~pGH~LVvPKr-Hv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~H 141 (184)
..+++|...++|++...| +++|+|||||+ |+.++.||+++++.+|+..++++++++++.++++++|++. +||+|+|
T Consensus 18 ~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~~--aGq~V~H 94 (149)
T 3i4s_A 18 TIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIAA--LGNLVPQ 94 (149)
T ss_dssp EEEEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE--CCSSCCS
T ss_pred CEEEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee--cCCcCCE
Confidence 468999999999998655 56699999999 8999999999999999999999999999999999999984 8999999
Q ss_pred eEecceeecCCCCCCc
Q 030014 142 SHLPLFFLPSYSLGFL 157 (184)
Q Consensus 142 lHlHi~iiPR~~~~~~ 157 (184)
+|+| |||||.+|..
T Consensus 95 lH~H--vIPR~~~D~~ 108 (149)
T 3i4s_A 95 LHVH--IIARRTGDAA 108 (149)
T ss_dssp CCEE--EEEECTTSTT
T ss_pred EEEE--EECCcCCCCC
Confidence 9998 9999998863
No 25
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=99.53 E-value=8.6e-15 Score=117.91 Aligned_cols=101 Identities=13% Similarity=0.098 Sum_probs=71.2
Q ss_pred EEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHH--HHHHHHHHHHHHHH-H-HHHHcC----------C-----
Q 030014 65 KLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPS--VVAAMCAKVPLISN-A-IMKATD----------A----- 125 (184)
Q Consensus 65 iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~e--e~~~L~~~l~~v~~-~-l~~~~~----------~----- 125 (184)
+|||||.++||.|.+|.+|||+|||||+|+.++.++.+. +...|...+..++. . |.+.++ .
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 999999999999999999999999999999998876542 12233344433333 2 333221 1
Q ss_pred CceEEEEeCCCCceeeeEecceeecCCCCCCccccccccCCCcccee
Q 030014 126 GMCQIFYTAVTTKLSHSHLPLFFLPSYSLGFLALSCIKSATGWGYFG 172 (184)
Q Consensus 126 ~~~ni~~n~~gq~v~HlHlHi~iiPR~~~~~~~~~~~~~~~~Wg~~~ 172 (184)
..++++++ +++++.|+|+| ||-+. |...+.+..+.|..|.
T Consensus 103 ~~i~~GfH-a~PSm~HLHLH--VIS~D----f~s~~lK~kkH~NSF~ 142 (204)
T 3sp4_A 103 NYIKVGFH-AGPSMNNLHLH--IMTLD----HVSPSLKNSAHYISFT 142 (204)
T ss_dssp TTEEEEEE-SSCSSSSCCEE--EEESC----CCCTTCCSHHHHHHHH
T ss_pred eeEeccCC-CCCcccceeEE--EeccC----CCChhhCccchhcccC
Confidence 25899998 57899999999 77753 3334566666787774
No 26
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=98.82 E-value=1.5e-08 Score=85.60 Aligned_cols=102 Identities=11% Similarity=0.101 Sum_probs=76.9
Q ss_pred CeeceeccC-CCcccEEEECCe----EEEEEcCC----CCCceEEEEEeCCc-cCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 030014 51 CVFCKIIRG-ESPAVKLYEYDT----CLCILDTN----PLSLGHSLIVPKSH-FSCLDATPPSVVAAMCAKVPLISNAIM 120 (184)
Q Consensus 51 C~FC~ii~~-e~~~~iV~E~d~----~~af~~~~----p~~pGH~LVvPKrH-v~~l~dL~~ee~~~L~~~l~~v~~~l~ 120 (184)
-+--+|+.+ +.+.+++|||+. |+++.|.. |...-|+|+||++| +.++.||+++.+.-|-.+...+.+.+.
T Consensus 138 ~Wv~nIl~~~~E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~ 217 (301)
T 3bl9_A 138 QWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAIL 217 (301)
T ss_dssp HHHHHHHTTSSSGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhCCCccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHH
Confidence 344456655 345799999988 99999876 78999999999988 999999999998755555555666777
Q ss_pred HHcC--CCceEEEEeCCCCceeeeEecceeecCCCC
Q 030014 121 KATD--AGMCQIFYTAVTTKLSHSHLPLFFLPSYSL 154 (184)
Q Consensus 121 ~~~~--~~~~ni~~n~~gq~v~HlHlHi~iiPR~~~ 154 (184)
+.+| .+.+.++++. --++.|+|+|| +-+.+..
T Consensus 218 ~~y~~~~~~~rlgfHy-~PS~yHLHlHv-is~~~~s 251 (301)
T 3bl9_A 218 QRYRMKGDHLRVYLHY-LPSYYHLHVHF-TALGFEA 251 (301)
T ss_dssp HHHCCCGGGEEEEEES-SCSSSSCEEEE-EETTSCC
T ss_pred HhcCCChHHeEEEecC-CCCcceEEEEE-EecCCCC
Confidence 7766 5689999983 12788999994 4444433
No 27
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=98.77 E-value=2.4e-08 Score=85.76 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=75.4
Q ss_pred CeeceeccCC-CcccEEEECCe----EEEEEcCC----CCCceEEEEEeCCc-cCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 030014 51 CVFCKIIRGE-SPAVKLYEYDT----CLCILDTN----PLSLGHSLIVPKSH-FSCLDATPPSVVAAMCAKVPLISNAIM 120 (184)
Q Consensus 51 C~FC~ii~~e-~~~~iV~E~d~----~~af~~~~----p~~pGH~LVvPKrH-v~~l~dL~~ee~~~L~~~l~~v~~~l~ 120 (184)
-+-=+|+.+. .+.++||||+. |++|.|.. |...-|+|+||++| +.++.||+.+.+.-|-.+...+.+.+.
T Consensus 185 ~Wv~nIl~~~~E~e~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~ 264 (350)
T 1vlr_A 185 QWVYNILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAIL 264 (350)
T ss_dssp HHHHHHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhCCCccccEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHH
Confidence 3444566553 45799999988 99999876 78999999999988 999999999998755555555666777
Q ss_pred HHcC--CCceEEEEeCCCCceeeeEecceeecCCCC
Q 030014 121 KATD--AGMCQIFYTAVTTKLSHSHLPLFFLPSYSL 154 (184)
Q Consensus 121 ~~~~--~~~~ni~~n~~gq~v~HlHlHi~iiPR~~~ 154 (184)
+.+| .+.+.++++. --++.|+|+|| |-+.+..
T Consensus 265 ~~yg~~~~~lRlgfHy-~PS~yHLHlHv-is~~~~s 298 (350)
T 1vlr_A 265 KRYQVTGDRLRVYLHY-LPSYYHLHVHF-TALGFEA 298 (350)
T ss_dssp HHHCCCGGGEEEEEES-SCSSSSCEEEE-EETTSCC
T ss_pred HhcCCChHHeEEEecC-CCCcceEEEEE-EeccCCC
Confidence 7766 5689999983 12788999994 4444433
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.69 E-value=5.6e-08 Score=83.96 Aligned_cols=103 Identities=20% Similarity=0.227 Sum_probs=78.2
Q ss_pred CCCeeceeccCCCcccEEE-----ECCeEEEEEcCCCCCc------------e-----------EEEEEeCCccCCCCCC
Q 030014 49 NDCVFCKIIRGESPAVKLY-----EYDTCLCILDTNPLSL------------G-----------HSLIVPKSHFSCLDAT 100 (184)
Q Consensus 49 ~~C~FC~ii~~e~~~~iV~-----E~d~~~af~~~~p~~p------------G-----------H~LVvPKrHv~~l~dL 100 (184)
..|+||.-.....+..+.. .+-.+++|.+.+|... | +++|.+.+|..++.+|
T Consensus 61 ~~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~l 140 (351)
T 1z84_A 61 SSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDI 140 (351)
T ss_dssp CCCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGS
T ss_pred CCCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHC
Confidence 3699997432222222221 3456899999999983 5 8899999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeecC
Q 030014 101 PPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 101 ~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiPR 151 (184)
+.+++.+++++.+.-.+.|.+..+...++++.| .+|.+.+|.|.||.-+|.
T Consensus 141 s~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~ 194 (351)
T 1z84_A 141 DPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPV 194 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCc
Confidence 999999998888777777776666778888888 478999999999655554
No 29
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=96.42 E-value=0.0078 Score=51.47 Aligned_cols=65 Identities=11% Similarity=0.066 Sum_probs=46.1
Q ss_pred EEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEe---CCCCceeeeEecceeecC
Q 030014 85 HSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYT---AVTTKLSHSHLPLFFLPS 151 (184)
Q Consensus 85 H~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n---~~gq~v~HlHlHi~iiPR 151 (184)
.++|...+|-.++.+|+.+++.+++++...-...|.+. ..-+.++.| .+|.|.+|-|..|.-+|.
T Consensus 107 ~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~~~--~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~~ 174 (348)
T 1gup_A 107 RVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKT--YPWVQVFENKGAAMGCSNPHPGGQIWANSF 174 (348)
T ss_dssp EEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHHHH--CSEEEEEEEESGGGTCSCCSSEEEEEEESS
T ss_pred EEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHhhc--CCEEEEecccCCcCCcCCCCCceeEEeccc
Confidence 55666679999999999999998888776666666522 222334446 478999999998544443
No 30
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=94.95 E-value=0.029 Score=45.45 Aligned_cols=83 Identities=10% Similarity=0.098 Sum_probs=55.5
Q ss_pred ccEEEECCeEEEEEcCCCCCceEEEEEeCCccCCCCC---C---CHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeC-C
Q 030014 63 AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSCLDA---T---PPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTA-V 135 (184)
Q Consensus 63 ~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~l~d---L---~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~-~ 135 (184)
...|.....++++.| +..|.|.|++|...++-+++ + ++.-+.+-++.=..+.+++.+.+..+.+.+.+|+ .
T Consensus 31 C~~Vd~~~gyvvlKD--~~Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~ 108 (227)
T 2pof_A 31 CAEVKPNAGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRT 108 (227)
T ss_dssp SSEEETTTTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCGG
T ss_pred CceEccCCCEEEEeC--CCCCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCCC
Confidence 344555667777777 44788999999998876643 1 1234443343334455566666656688999984 6
Q ss_pred CCceeeeEecce
Q 030014 136 TTKLSHSHLPLF 147 (184)
Q Consensus 136 gq~v~HlHlHi~ 147 (184)
|.+-+|+|+||-
T Consensus 109 gRSQnQLHIHIs 120 (227)
T 2pof_A 109 GRTQNHFHIHIS 120 (227)
T ss_dssp GCSCCSCCEEEE
T ss_pred Cccccceeeehh
Confidence 789999999953
No 31
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=89.74 E-value=0.15 Score=36.46 Aligned_cols=31 Identities=16% Similarity=0.273 Sum_probs=27.8
Q ss_pred eEeecccccCCCCCCCCCCC--ccchhhhhhcc
Q 030014 9 AVLSSHLLPTGPAPCSSSSG--VSASFCAQQRL 39 (184)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~ 39 (184)
++.++|++|..-||.++.++ .+|..|+..+.
T Consensus 49 ~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~K~ 81 (112)
T 2qgp_A 49 ELTMDHLVPVVRGGKSTRGNVVPACKECNNRKK 81 (112)
T ss_dssp GEEEEESSCTTTTCCCSTTTEEEEEHHHHHHHH
T ss_pred CcEEEEEeehhcCCCCChhhChhhCHHHHHHHc
Confidence 47899999999999998888 99999999866
No 32
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=67.35 E-value=16 Score=28.21 Aligned_cols=62 Identities=16% Similarity=0.037 Sum_probs=36.5
Q ss_pred CCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCc--eEEEEeCCCCceeeeEecceeecCCCCCC
Q 030014 79 NPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGM--CQIFYTAVTTKLSHSHLPLFFLPSYSLGF 156 (184)
Q Consensus 79 ~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~--~ni~~n~~gq~v~HlHlHi~iiPR~~~~~ 156 (184)
.+.+.--.+=+| .+|+.++..+| +...+++.+...+ +.+.++..+..-||+|+ ++.....|+
T Consensus 68 a~lare~~iALP-------~EL~~eq~~~L------~~~f~~~~~~~~G~~~d~AIH~~~~~NpHaHi---m~t~R~~dg 131 (185)
T 2ns6_A 68 GRLFKEVEFALP-------VELTLDQQKAL------ASEFAQHLTGAERLPYTLAIHAGGGENPHCHL---MISERINDG 131 (185)
T ss_dssp SCCEEEEEEECC-------TTSCHHHHHHH------HHHHHHHHHTTTTCCEEEEEEEETTTEEEEEE---EECCBCCCS
T ss_pred CeEEEEEEEECC-------ccCCHHHHHHH------HHHHHHHHHHhcCCEEEEEEEcCCCCCceEEE---EEeeccccc
Confidence 344444445555 45888888766 3344555565444 45666644567777777 666555444
No 33
>3vg8_G Hypothetical protein TTHB210; alpha and beta proteins (A+B), unknown function; 2.20A {Thermus thermophilus}
Probab=63.79 E-value=5.5 Score=28.39 Aligned_cols=26 Identities=12% Similarity=0.215 Sum_probs=20.8
Q ss_pred CCceEEEEeC--CCCceeeeEecceeec
Q 030014 125 AGMCQIFYTA--VTTKLSHSHLPLFFLP 150 (184)
Q Consensus 125 ~~~~ni~~n~--~gq~v~HlHlHi~iiP 150 (184)
.+.+++.+|. .|-++||+|+|+..+|
T Consensus 76 vDHVdi~~~~gHpGve~PHyhI~l~~Vs 103 (116)
T 3vg8_G 76 IDHVNMIPSGPHPGVSEPHYHIELVLVS 103 (116)
T ss_dssp CCEEEEEECCCCTTCCSCEEEEEEESSC
T ss_pred cceEEEecCCCCCCcccCceEEEEEEec
Confidence 5789999974 4779999999976665
No 34
>2f5g_A Transposase, putative; dimer, stem-loop binding, gene regulation; 1.70A {Sulfolobus solfataricus} SCOP: d.58.57.1 PDB: 2f4f_A 2ec2_A
Probab=43.65 E-value=43 Score=23.39 Aligned_cols=53 Identities=17% Similarity=0.114 Sum_probs=27.6
Q ss_pred CCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceeeeEe
Q 030014 80 PLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHL 144 (184)
Q Consensus 80 p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~HlHl 144 (184)
+...+|+.+++|.-..-|. ++....|.+. ...+.+.++..-..+.. .-+|+|+
T Consensus 11 ~~~~yhi~~~~~~R~~v~~---~~~~~~l~~~----l~~~~~~~~~~i~a~~i-----mpdHvHl 63 (133)
T 2f5g_A 11 YLCNYHFVWIPKHRRNTLV---NEIAEYTKEV----LKSIAEELGCEIIALEV-----MPDHIHL 63 (133)
T ss_dssp EECEEEEEECBSSCTTCSC---HHHHHHHHHH----HHHHHHHHTCEEEEEEE-----ETTEEEE
T ss_pred cceEEEEEEecCcchhhhc---hhHHHHHHHH----HHHHHHhCCeEEeeeee-----cCCcEEE
Confidence 3467888888887666443 3433434443 33334444544322222 2347776
No 35
>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}
Probab=39.24 E-value=20 Score=23.54 Aligned_cols=38 Identities=26% Similarity=0.550 Sum_probs=25.6
Q ss_pred eeccCCC-cccEEEECCeEEEEEcCCCCCceEEEEEeCCccCC
Q 030014 55 KIIRGES-PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFSC 96 (184)
Q Consensus 55 ~ii~~e~-~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~~ 96 (184)
++++|+. .+++.++|.+|+++.+.+ ++..+|.|+.+..
T Consensus 29 ~L~tGd~l~G~i~WQD~~cl~L~~~~----~~~~LI~R~AI~~ 67 (72)
T 3hfn_A 29 KLVTGDAITGRVLWQDPTCVCIADEN----SRQTTIWKQAIAY 67 (72)
T ss_dssp EETTSCEEEEEEEEECSSEEEEEC-------CEEEEEGGGEEE
T ss_pred EecCCCEEEEEEEEECCCEEEEEcCC----CCeEEEEeeeeEE
Confidence 3445543 568999999999999776 4557777776643
No 36
>3hfo_A SSR3341 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 1.30A {Synechocystis SP}
Probab=31.39 E-value=36 Score=22.16 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=25.7
Q ss_pred eccCCC-cccEEEECCeEEEEEcCCCCCceEEEEEeCCccC
Q 030014 56 IIRGES-PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFS 95 (184)
Q Consensus 56 ii~~e~-~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~ 95 (184)
+++|+. .+++.+.|.+|+++.+.+ ++..+|.|..+.
T Consensus 28 L~tG~~l~G~i~WQD~~cl~L~~~~----~~~~LI~r~AI~ 64 (70)
T 3hfo_A 28 LLTGDSLFGTIRWQDTDGLGLVDDS----ERSTIVRLAAIA 64 (70)
T ss_dssp ETTSCEEEEEEEEECSSEEEEECTT----CCEEEEEGGGEE
T ss_pred ecCCCEEEEEEEEeCCCEEEEEcCC----CCeEEEEeeeeE
Confidence 445543 568999999999998764 455677776654
No 37
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=23.70 E-value=71 Score=26.98 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=24.6
Q ss_pred CCccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 030014 91 KSHFSCLDATPPSVVAAMCAKVPLISNAIM 120 (184)
Q Consensus 91 KrHv~~l~dL~~ee~~~L~~~l~~v~~~l~ 120 (184)
.||+-++.||+.+|+..|++....+.+..+
T Consensus 31 grhlLsi~dls~eei~~ll~~A~~lK~~~~ 60 (358)
T 4h31_A 31 NRNFLKLLDFSTKEIQFLIDLSADLKKAKY 60 (358)
T ss_dssp TCCBCCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCchhhCCHHHHHHHHHHHHHHHHHHh
Confidence 489999999999999999987777655443
No 38
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=23.62 E-value=54 Score=27.78 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=24.8
Q ss_pred EEeCCccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 030014 88 IVPKSHFSCLDATPPSVVAAMCAKVPLISNAI 119 (184)
Q Consensus 88 VvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l 119 (184)
....||+-++.||+.+|+..|++....+....
T Consensus 20 ~~~~rhlLsi~dls~~ei~~ll~~A~~lK~~~ 51 (353)
T 3sds_A 20 PSTPRHLLSIADLTPTEFATLVRNASSYKKTI 51 (353)
T ss_dssp --CCCCBSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcCchhhCCHHHHHHHHHHHHHHHHHh
Confidence 34579999999999999999988777665543
No 39
>2vjv_A Transposase ORFA; DNA-binding protein, protein-DNA complex, HUH motif, DNA stem loop, transposition; 1.90A {Helicobacter pylori} SCOP: d.58.57.1 PDB: 2vhg_A 2vic_A 2vju_A 2vih_A 2a6m_A 2a6o_A
Probab=23.41 E-value=1.4e+02 Score=21.65 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=28.4
Q ss_pred CCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEeCCCCceeeeEe
Q 030014 81 LSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPLISNAIMKATDAGMCQIFYTAVTTKLSHSHL 144 (184)
Q Consensus 81 ~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~v~~~l~~~~~~~~~ni~~n~~gq~v~HlHl 144 (184)
...+|++.++|.-..-| .++....|.++++. +.+.++.+-..+.. .-+|+|+
T Consensus 20 ~~~YHiv~~~k~R~~vf---~~~~~~~l~~~l~~----~~~~~~~~i~a~~v-----mpDHVHl 71 (159)
T 2vjv_A 20 SCKYHIVWCPKYRRKVL---VGAVEMRLKEIIQE----VAKELRVEIIEMQT-----DKDHIHI 71 (159)
T ss_dssp ECEEEEEECBGGGCCCC---SHHHHHHHHHHHHH----HHHHTTCEEEEEEE-----ETTEEEE
T ss_pred ceEEEEEEeccCCcccc---CccHHHHHHHHHHH----hhccCCEEEEEEee-----cCCcEEE
Confidence 35779999998765534 34455555555444 34445554322222 2357777
No 40
>1ts9_A Ribonuclease P protein component 1; anti-parallel, beta-sheet, alpha helix, internal salt bridge, selenomethionine, SM-fold, hydrolase; 1.70A {Archaeoglobus fulgidus} SCOP: b.137.1.1 PDB: 1tsf_A 1pc0_A
Probab=23.41 E-value=75 Score=22.01 Aligned_cols=28 Identities=18% Similarity=0.022 Sum_probs=23.1
Q ss_pred cccEEEECCeEEEEEcCCCCCceEEEEEeCCcc
Q 030014 62 PAVKLYEYDTCLCILDTNPLSLGHSLIVPKSHF 94 (184)
Q Consensus 62 ~~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv 94 (184)
.+.+|.|+.+.+.+.. .+.+.+|||++.
T Consensus 34 ~GiVV~ETkntf~I~t-----~~~~k~VPK~~~ 61 (102)
T 1ts9_A 34 KGEVVDETQNTLKIMT-----EKGLKVVAKRGR 61 (102)
T ss_dssp EEEEEEECSSEEEEEE-----SSSEEEEECTTC
T ss_pred EEEEEEeccceEEEEe-----CCcEEEEECCCE
Confidence 3568999999998886 457899999986
No 41
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=22.82 E-value=67 Score=23.64 Aligned_cols=66 Identities=15% Similarity=0.128 Sum_probs=36.5
Q ss_pred ccchhhhhhccCCccc--CCCCCCCeeceeccCCCc----ccEEEECCeEEEEEcCCCCCceEEEEEeCCccC
Q 030014 29 VSASFCAQQRLSHSQE--SGHENDCVFCKIIRGESP----AVKLYEYDTCLCILDTNPLSLGHSLIVPKSHFS 95 (184)
Q Consensus 29 ~~~~~c~~~~~~~~~~--~~~~~~C~FC~ii~~e~~----~~iV~E~d~~~af~~~~p~~pGH~LVvPKrHv~ 95 (184)
..|+.|.......... ......|..|....-..+ .-+|+.++.+++........+| .|-+|.-++.
T Consensus 4 ~~C~~CG~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~v~~ii~~~~~vLL~~r~~~~~~g-~w~lPgG~ve 75 (189)
T 3cng_A 4 KFCSQCGGEVILRIPEGDTLPRYICPKCHTIHYQNPKVIVGCIPEWENKVLLCKRAIAPYRG-KWTLPAGFME 75 (189)
T ss_dssp CBCTTTCCBCEEECCTTCSSCEEEETTTTEEECCCCEEEEEEEEEETTEEEEEEESSSSSTT-CEECSEEECC
T ss_pred ccCchhCCccccccccCCCCcceECCCCCCccCCCCceEEEEEEEeCCEEEEEEccCCCCCC-eEECceeecc
Confidence 5799999886521111 112234777763322222 1356677777766655433344 4678887776
No 42
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=22.70 E-value=1e+02 Score=21.37 Aligned_cols=28 Identities=0% Similarity=-0.158 Sum_probs=23.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHc
Q 030014 96 CLDATPPSVVAAMCAKVPLISNAIMKAT 123 (184)
Q Consensus 96 ~l~dL~~ee~~~L~~~l~~v~~~l~~~~ 123 (184)
-+..++++|...|..++.++...+++..
T Consensus 120 ~~~~l~~~e~~~l~~~l~~l~~~l~~~~ 147 (149)
T 4hbl_A 120 LPQEFDTTEYDETKYVFEELEQTLKHLI 147 (149)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3578999999999999999988887654
No 43
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=22.62 E-value=81 Score=26.06 Aligned_cols=29 Identities=3% Similarity=0.103 Sum_probs=23.8
Q ss_pred CccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 030014 92 SHFSCLDATPPSVVAAMCAKVPLISNAIM 120 (184)
Q Consensus 92 rHv~~l~dL~~ee~~~L~~~l~~v~~~l~ 120 (184)
||+-++.||+.+|+..|.+....+.+..+
T Consensus 2 rhll~~~dls~~ei~~ll~~A~~lk~~~~ 30 (306)
T 4ekn_B 2 KHLISMKDIGKEEILEILDEARKMEELLN 30 (306)
T ss_dssp CCBCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCchhhCCHHHHHHHHHHHHHHHhHhh
Confidence 78889999999999999887776665443
No 44
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=22.26 E-value=1.1e+02 Score=25.73 Aligned_cols=29 Identities=7% Similarity=-0.048 Sum_probs=24.5
Q ss_pred CCccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 030014 91 KSHFSCLDATPPSVVAAMCAKVPLISNAI 119 (184)
Q Consensus 91 KrHv~~l~dL~~ee~~~L~~~l~~v~~~l 119 (184)
.||+-++.||+.+|+..|++....+.+..
T Consensus 6 ~rh~Ls~~dls~~ei~~ll~~A~~lk~~~ 34 (335)
T 1dxh_A 6 NRNLLSLMHHSTRELRYLLDLSRDLKRAK 34 (335)
T ss_dssp TCCBSSSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCchHhCCHHHHHHHHHHHHHHHhhh
Confidence 58999999999999999998877776543
No 45
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=22.10 E-value=1.2e+02 Score=21.27 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=22.8
Q ss_pred CCCCceEEEEEeCCccCC--C----CCCCHHHHHHHHHHHHH
Q 030014 79 NPLSLGHSLIVPKSHFSC--L----DATPPSVVAAMCAKVPL 114 (184)
Q Consensus 79 ~p~~pGH~LVvPKrHv~~--l----~dL~~ee~~~L~~~l~~ 114 (184)
....--|+-|+|+..-.+ + ...++++++++++.++.
T Consensus 91 q~v~HlH~HiiPr~~~d~~~~~~~~~~~~~~~l~~~~~~l~~ 132 (138)
T 3p0t_A 91 LEVPHLHVHVFPTRSLSDFGFANVDRNPSPESLDEAQAKIKA 132 (138)
T ss_dssp SSCSSCCEEEEEESCGGGSSSTTCCSSCCHHHHHHHHHHHHH
T ss_pred cccCEEEEEEeccccCCCCcccCCCCCCCHHHHHHHHHHHHH
Confidence 345677999999987532 2 34556777766655443
No 46
>3qc5_X Platelet binding protein GSPB; carbohydrate/sugar binding, sugar binding protein; HET: GOL; 1.40A {Streptococcus gordonii} PDB: 3qc6_X 4i8e_X* 3qd1_X*
Probab=21.83 E-value=1.3e+02 Score=25.52 Aligned_cols=41 Identities=5% Similarity=-0.147 Sum_probs=29.1
Q ss_pred CCeEEEEEcCCCCCceEEEEEeCCccCCCCCCCHHHHHHHHHHHHH
Q 030014 69 YDTCLCILDTNPLSLGHSLIVPKSHFSCLDATPPSVVAAMCAKVPL 114 (184)
Q Consensus 69 ~d~~~af~~~~p~~pGH~LVvPKrHv~~l~dL~~ee~~~L~~~l~~ 114 (184)
+.+|.....+.|..|+ .|--|.+...|+++|..++.+.++.
T Consensus 269 ~G~fklviKy~P~vP~-----~KV~V~DPnnLTd~EKekVkeaVKk 309 (360)
T 3qc5_X 269 NGQFKLIIRFRIKTPE-----NTVFVNNPNQLTEVEKNLVREAVKK 309 (360)
T ss_dssp TTEEEEEEECCCCCCS-----SCEEESCTTSCCHHHHHHHHHHHHH
T ss_pred cccEEEEEecCCCCCC-----cceEecCcccCCHHHHHHHHHHHHH
Confidence 3566666678888886 3336788999999999866555443
No 47
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=21.65 E-value=1.1e+02 Score=21.03 Aligned_cols=25 Identities=8% Similarity=0.086 Sum_probs=20.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH
Q 030014 97 LDATPPSVVAAMCAKVPLISNAIMK 121 (184)
Q Consensus 97 l~dL~~ee~~~L~~~l~~v~~~l~~ 121 (184)
+..++++|...+..++.++...+++
T Consensus 123 ~~~l~~~e~~~l~~~l~~l~~~l~~ 147 (148)
T 3nrv_A 123 LEEFEEAEKDQLFILLKKLRNKVDQ 147 (148)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhhc
Confidence 4678899999898888888877754
No 48
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=21.53 E-value=1.1e+02 Score=20.87 Aligned_cols=26 Identities=4% Similarity=0.120 Sum_probs=21.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 030014 97 LDATPPSVVAAMCAKVPLISNAIMKA 122 (184)
Q Consensus 97 l~dL~~ee~~~L~~~l~~v~~~l~~~ 122 (184)
+..+++++...+.+++.++...+.+.
T Consensus 112 ~~~l~~~e~~~l~~~l~~l~~~l~~~ 137 (144)
T 1lj9_A 112 LQGLSEVEISQLADYLVRMRKNVSED 137 (144)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 56789999999999888888777654
No 49
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=21.41 E-value=96 Score=21.07 Aligned_cols=24 Identities=17% Similarity=-0.040 Sum_probs=19.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 030014 97 LDATPPSVVAAMCAKVPLISNAIM 120 (184)
Q Consensus 97 l~dL~~ee~~~L~~~l~~v~~~l~ 120 (184)
+..++++|...+..++.++...++
T Consensus 121 ~~~l~~~e~~~l~~~l~~l~~~l~ 144 (146)
T 2fbh_A 121 LTGIDESEQALCQQVLLRILANLE 144 (146)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHh
Confidence 567889999888888888877665
No 50
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=21.18 E-value=1.1e+02 Score=21.77 Aligned_cols=27 Identities=11% Similarity=0.260 Sum_probs=22.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHc
Q 030014 97 LDATPPSVVAAMCAKVPLISNAIMKAT 123 (184)
Q Consensus 97 l~dL~~ee~~~L~~~l~~v~~~l~~~~ 123 (184)
+..|+++|+..|..+++++.+-|.+..
T Consensus 115 ~~~l~~ee~~~l~~~L~kl~~nl~~l~ 141 (151)
T 4aik_A 115 LGGISSDEIAVLSGLIDKLEKNIIQLQ 141 (151)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999988887776543
No 51
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=20.66 E-value=1.2e+02 Score=20.45 Aligned_cols=25 Identities=0% Similarity=-0.043 Sum_probs=20.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH
Q 030014 97 LDATPPSVVAAMCAKVPLISNAIMK 121 (184)
Q Consensus 97 l~dL~~ee~~~L~~~l~~v~~~l~~ 121 (184)
+..+++++...+...+.++...+++
T Consensus 112 ~~~l~~~e~~~l~~~l~~~~~~l~~ 136 (138)
T 3bpv_A 112 FRDFTEDERKLFRKMCRRLAEEAVR 136 (138)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999898888888877654
No 52
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=20.58 E-value=99 Score=25.48 Aligned_cols=28 Identities=7% Similarity=0.046 Sum_probs=23.2
Q ss_pred eCCccCCCCCCCHHHHHHHHHHHHHHHH
Q 030014 90 PKSHFSCLDATPPSVVAAMCAKVPLISN 117 (184)
Q Consensus 90 PKrHv~~l~dL~~ee~~~L~~~l~~v~~ 117 (184)
..||+-++.||+.+|+..|++....+.+
T Consensus 8 ~~rhlls~~dls~~ei~~ll~~A~~lk~ 35 (301)
T 2ef0_A 8 LPKDLLDFSGYGPKELQALLDLAEQLKR 35 (301)
T ss_dssp CCSCBSSSTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCcchhhCCHHHHHHHHHHHHHHHh
Confidence 3589999999999999999887666654
No 53
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=20.29 E-value=74 Score=22.25 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=18.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 030014 97 LDATPPSVVAAMCAKVPLISNAIMKA 122 (184)
Q Consensus 97 l~dL~~ee~~~L~~~l~~v~~~l~~~ 122 (184)
+..++++|...|.+++.++...+++.
T Consensus 131 ~~~l~~~e~~~l~~~l~~l~~~l~~~ 156 (160)
T 3boq_A 131 LRAVSDQDMVEASAALRGILESMQTG 156 (160)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHC---
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhhcc
Confidence 56788888888888888877665543
No 54
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=20.14 E-value=94 Score=25.79 Aligned_cols=29 Identities=7% Similarity=0.096 Sum_probs=24.5
Q ss_pred CCccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 030014 91 KSHFSCLDATPPSVVAAMCAKVPLISNAI 119 (184)
Q Consensus 91 KrHv~~l~dL~~ee~~~L~~~l~~v~~~l 119 (184)
.||+-++.||+.+|+..|++....+.+..
T Consensus 7 ~rhlls~~dls~~ei~~ll~~A~~lk~~~ 35 (315)
T 1pvv_A 7 GRDLLCLQDYTAEEIWTILETAKMFKIWQ 35 (315)
T ss_dssp TCCBSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhhCCHHHHHHHHHHHHHHHhhh
Confidence 48999999999999999998877776543
Done!