BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030023
MINRGTFIYFFVQVEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALVLASTNLT
TARIAAGCLALALFIVLFIAQNWTLRGLCIGFIVFLAVIWVLQEETSVRILRYVILFIGV
MNSLFSVYDIYDDLISRRVHSSDAEKFAEVCPCPCNGVGWGVIWGIISFAFLCAAMYLGL
VILS

High Scoring Gene Products

Symbol, full name Information P value
AT1G67060 protein from Arabidopsis thaliana 1.1e-64
CPS_1186
Putative membrane protein
protein from Colwellia psychrerythraea 34H 5.4e-08
CPS_1186
putative membrane protein
protein from Colwellia psychrerythraea 34H 5.4e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030023
        (184 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019743 - symbol:AT1G67060 "AT1G67060" species...   659  1.1e-64   1
ASPGD|ASPL0000071635 - symbol:AN4854 species:162425 "Emer...   213  2.0e-17   1
UNIPROTKB|Q486T6 - symbol:CPS_1186 "Putative membrane pro...   126  5.4e-08   1
TIGR_CMR|CPS_1186 - symbol:CPS_1186 "putative membrane pr...   126  5.4e-08   1


>TAIR|locus:2019743 [details] [associations]
            symbol:AT1G67060 "AT1G67060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            eggNOG:NOG76042 HOGENOM:HOG000235024 EMBL:BT029386 EMBL:AK317440
            IPI:IPI00529725 RefSeq:NP_176877.2 UniGene:At.35696
            EnsemblPlants:AT1G67060.1 GeneID:843026 KEGG:ath:AT1G67060
            TAIR:At1g67060 InParanoid:A0JQ16 OMA:VIWGMIS PhylomeDB:A0JQ16
            ProtClustDB:CLSN2680779 Genevestigator:A0JQ16 Uniprot:A0JQ16
        Length = 234

 Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
 Identities = 131/171 (76%), Positives = 141/171 (82%)

Query:    14 VEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGCXXXXX 73
             VEGM+V+ANEGG+T TRGGIYWLILPAGYLGSSFWGMAL+LASTNL TARIAA       
Sbjct:    65 VEGMEVNANEGGSTTTRGGIYWLILPAGYLGSSFWGMALILASTNLLTARIAAAGLGLAL 124

Query:    74 XXXXXXXQNWTLRGLCIGFIVFLAVIWVLQEETSVRILRYVILFIGVMNSLFSVYDIYDD 133
                    +NWTLRGLCIGFIVFLAVIWVLQE T+V+ILRYVILFIGVMNSLFSVYDIYDD
Sbjct:   125 FIVLFIAKNWTLRGLCIGFIVFLAVIWVLQELTTVKILRYVILFIGVMNSLFSVYDIYDD 184

Query:   134 LISRRVHSSDAEKFAEVCPCPCNXXXXXXXXXXXSFAFLCAAMYLGLVILS 184
             LISRRVHSSDAEKFAE+CPC C            SFAFLCA++YLGLVILS
Sbjct:   185 LISRRVHSSDAEKFAEICPC-CTGCGWGVIWGMISFAFLCASLYLGLVILS 234


>ASPGD|ASPL0000071635 [details] [associations]
            symbol:AN4854 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001303 EMBL:AACD01000083 RefSeq:XP_662458.1
            EnsemblFungi:CADANIAT00005554 GeneID:2872648 KEGG:ani:AN4854.2
            eggNOG:NOG76042 HOGENOM:HOG000235024 OMA:LSHEETH OrthoDB:EOG4BS0VN
            Uniprot:Q5B3M6
        Length = 269

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 54/142 (38%), Positives = 80/142 (56%)

Query:    13 QVEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGCXXXX 72
             +V+ + +  +EGG T  +GG+  + LPAGYLGSS  G  L+ A  N+  +++A+      
Sbjct:    84 RVKSISLDPHEGGVTHMQGGMAAITLPAGYLGSSIIGALLIFAGFNIIASKVASIVLGVC 143

Query:    73 XXXXXXXXQNWTLRGLCIGFIVFLAV-----IWVLQEETSVRILRYVILFIGVMNSLFSV 127
                       W  R L     V LAV      W +    +   L++V+LFIGVM++L+SV
Sbjct:   144 FLLTLW----WARRDLLTIVTVLLAVGLLVACWFIAHGEA---LKWVVLFIGVMSALYSV 196

Query:   128 YDIYDDLISRRVHSSDAEKFAE 149
             +DI DDLI R+V+SSDA  FA+
Sbjct:   197 WDICDDLILRKVNSSDASVFAQ 218


>UNIPROTKB|Q486T6 [details] [associations]
            symbol:CPS_1186 "Putative membrane protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:NOG76042
            RefSeq:YP_267929.1 STRING:Q486T6 GeneID:3523105 KEGG:cps:CPS_1186
            PATRIC:21465621 HOGENOM:HOG000293005 OMA:LCWRRVD
            ProtClustDB:CLSK906786 BioCyc:CPSY167879:GI48-1267-MONOMER
            Uniprot:Q486T6
        Length = 226

 Score = 126 (49.4 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 40/125 (32%), Positives = 65/125 (52%)

Query:    13 QVEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALV-LASTNLTTARIAAGCXXX 71
             ++  +Q+ AN  G   TRGG+ ++I   GY G++FWG  L  LA+++  TA+I +G    
Sbjct:    60 EIMRIQLFANGAGLCTTRGGLSFIISFFGYAGATFWGWLLFKLANSHQRTAQIVSGFMIV 119

Query:    72 XXXXXXXXXQNWTLRGLCIGFIVFLAVIWVLQ-EETSVRILRYVILFIGV---MNSLFSV 127
                        W    L I  I  LAV++VL  +   +  L+ ++ F G+   +NSLFS 
Sbjct:   120 LLLVSIIF---WARDLLTIIIISSLAVMFVLTIKMRRLYTLQVLLKFFGLSILLNSLFSP 176

Query:   128 YDIYD 132
               ++D
Sbjct:   177 TYLFD 181


>TIGR_CMR|CPS_1186 [details] [associations]
            symbol:CPS_1186 "putative membrane protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016020 "membrane" evidence=ISS] EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:NOG76042 RefSeq:YP_267929.1
            STRING:Q486T6 GeneID:3523105 KEGG:cps:CPS_1186 PATRIC:21465621
            HOGENOM:HOG000293005 OMA:LCWRRVD ProtClustDB:CLSK906786
            BioCyc:CPSY167879:GI48-1267-MONOMER Uniprot:Q486T6
        Length = 226

 Score = 126 (49.4 bits), Expect = 5.4e-08, P = 5.4e-08
 Identities = 40/125 (32%), Positives = 65/125 (52%)

Query:    13 QVEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALV-LASTNLTTARIAAGCXXX 71
             ++  +Q+ AN  G   TRGG+ ++I   GY G++FWG  L  LA+++  TA+I +G    
Sbjct:    60 EIMRIQLFANGAGLCTTRGGLSFIISFFGYAGATFWGWLLFKLANSHQRTAQIVSGFMIV 119

Query:    72 XXXXXXXXXQNWTLRGLCIGFIVFLAVIWVLQ-EETSVRILRYVILFIGV---MNSLFSV 127
                        W    L I  I  LAV++VL  +   +  L+ ++ F G+   +NSLFS 
Sbjct:   120 LLLVSIIF---WARDLLTIIIISSLAVMFVLTIKMRRLYTLQVLLKFFGLSILLNSLFSP 176

Query:   128 YDIYD 132
               ++D
Sbjct:   177 TYLFD 181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.142   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      184       161   0.00074  107 3  11 21  0.39    31
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  151 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.98u 0.10s 12.08t   Elapsed:  00:00:01
  Total cpu time:  11.98u 0.10s 12.08t   Elapsed:  00:00:01
  Start:  Fri May 10 05:35:07 2013   End:  Fri May 10 05:35:08 2013

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