Query 030025
Match_columns 184
No_of_seqs 119 out of 1631
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 11:36:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9c_A Caffeic acid O-methyltr 100.0 3.6E-32 1.2E-36 211.5 21.4 180 5-184 185-364 (364)
2 3reo_A (ISO)eugenol O-methyltr 100.0 5.9E-32 2E-36 210.6 20.9 180 5-184 187-366 (368)
3 4a6d_A Hydroxyindole O-methylt 100.0 6E-32 2.1E-36 209.4 17.3 177 3-184 162-345 (353)
4 1fp1_D Isoliquiritigenin 2'-O- 100.0 4.7E-29 1.6E-33 194.5 17.9 178 6-184 194-372 (372)
5 3lst_A CALO1 methyltransferase 100.0 2.3E-28 7.8E-33 189.1 18.6 174 5-184 169-347 (348)
6 1fp2_A Isoflavone O-methyltran 100.0 2.2E-28 7.7E-33 189.4 17.6 169 13-184 179-352 (352)
7 1zg3_A Isoflavanone 4'-O-methy 100.0 1.8E-28 6.2E-33 190.3 16.6 173 11-184 182-358 (358)
8 3gwz_A MMCR; methyltransferase 100.0 2.6E-28 8.9E-33 190.1 17.1 173 5-184 187-368 (369)
9 3i53_A O-methyltransferase; CO 100.0 1.1E-28 3.9E-33 189.6 13.1 166 9-184 158-331 (332)
10 2ip2_A Probable phenazine-spec 100.0 2.1E-27 7E-32 182.7 17.6 173 5-184 153-333 (334)
11 4gek_A TRNA (CMO5U34)-methyltr 100.0 1.5E-27 5.3E-32 177.5 15.8 161 19-184 68-256 (261)
12 1x19_A CRTF-related protein; m 99.9 1.7E-26 6E-31 179.2 17.0 170 7-184 177-358 (359)
13 2r3s_A Uncharacterized protein 99.9 2E-26 6.9E-31 177.1 16.1 178 2-183 145-333 (335)
14 3mcz_A O-methyltransferase; ad 99.9 1.8E-26 6.2E-31 178.6 15.6 168 11-184 169-348 (352)
15 3dp7_A SAM-dependent methyltra 99.9 9.6E-27 3.3E-31 180.9 12.9 171 12-184 171-354 (363)
16 1qzz_A RDMB, aclacinomycin-10- 99.9 1.9E-26 6.5E-31 179.8 14.1 174 5-184 167-355 (374)
17 1tw3_A COMT, carminomycin 4-O- 99.9 1.7E-26 5.9E-31 179.2 13.6 174 5-184 168-355 (360)
18 3dtn_A Putative methyltransfer 99.9 1.6E-24 5.3E-29 158.6 17.2 174 9-184 32-225 (234)
19 3dh0_A SAM dependent methyltra 99.9 1.3E-23 4.3E-28 152.2 15.0 156 9-184 26-192 (219)
20 3dlc_A Putative S-adenosyl-L-m 99.9 5.5E-25 1.9E-29 159.0 6.8 172 6-183 30-213 (219)
21 3hnr_A Probable methyltransfer 99.9 1.6E-23 5.6E-28 151.7 14.6 166 9-184 34-211 (220)
22 3ujc_A Phosphoethanolamine N-m 99.9 1.6E-23 5.3E-28 155.7 14.1 159 6-174 41-207 (266)
23 1vl5_A Unknown conserved prote 99.9 7.4E-23 2.5E-27 152.0 13.6 157 6-173 23-190 (260)
24 3dli_A Methyltransferase; PSI- 99.9 1.5E-22 5E-27 148.8 14.8 153 7-174 27-185 (240)
25 3ou2_A SAM-dependent methyltra 99.9 1.7E-22 5.9E-27 145.9 14.6 162 9-173 34-205 (218)
26 3ege_A Putative methyltransfer 99.9 4.7E-22 1.6E-26 147.9 16.7 155 5-173 19-178 (261)
27 1kpg_A CFA synthase;, cyclopro 99.9 3.3E-22 1.1E-26 150.5 15.8 165 7-173 51-228 (287)
28 3bus_A REBM, methyltransferase 99.9 5E-23 1.7E-27 153.8 11.0 161 5-174 46-217 (273)
29 1nkv_A Hypothetical protein YJ 99.9 1.1E-22 3.9E-27 150.5 12.5 158 4-173 20-187 (256)
30 1xxl_A YCGJ protein; structura 99.9 2.3E-22 7.8E-27 147.7 13.8 160 3-173 4-174 (239)
31 3mgg_A Methyltransferase; NYSG 99.9 5.8E-23 2E-27 153.7 10.1 162 9-173 26-198 (276)
32 2o57_A Putative sarcosine dime 99.9 1.4E-22 4.7E-27 153.3 11.8 157 5-173 63-234 (297)
33 3hem_A Cyclopropane-fatty-acyl 99.9 8.1E-22 2.8E-26 149.5 15.8 165 7-174 59-244 (302)
34 3kkz_A Uncharacterized protein 99.9 2.3E-22 7.9E-27 149.9 12.0 156 6-174 31-197 (267)
35 3f4k_A Putative methyltransfer 99.9 3.1E-22 1.1E-26 148.2 12.2 156 6-174 31-197 (257)
36 1xtp_A LMAJ004091AAA; SGPP, st 99.9 1.6E-22 5.5E-27 149.4 10.7 151 8-174 81-239 (254)
37 2fk8_A Methoxy mycolic acid sy 99.9 6.2E-22 2.1E-26 151.1 13.8 166 6-173 76-254 (318)
38 3h2b_A SAM-dependent methyltra 99.9 2.5E-22 8.5E-27 143.9 10.1 137 22-174 42-183 (203)
39 3e23_A Uncharacterized protein 99.9 7.7E-22 2.6E-26 142.2 12.5 138 19-173 41-182 (211)
40 1pjz_A Thiopurine S-methyltran 99.9 5.1E-22 1.8E-26 142.6 11.4 144 8-173 10-176 (203)
41 3gu3_A Methyltransferase; alph 99.9 3.4E-22 1.2E-26 150.4 11.0 168 4-173 5-190 (284)
42 3pfg_A N-methyltransferase; N, 99.9 2.6E-22 8.8E-27 149.3 9.9 163 20-184 49-248 (263)
43 3l8d_A Methyltransferase; stru 99.9 4.3E-21 1.5E-25 140.8 16.1 142 20-173 52-200 (242)
44 2p7i_A Hypothetical protein; p 99.9 5.2E-22 1.8E-26 146.0 11.1 159 9-173 30-199 (250)
45 3i9f_A Putative type 11 methyl 99.9 1.9E-22 6.5E-27 140.6 8.0 148 10-183 7-158 (170)
46 3ccf_A Cyclopropane-fatty-acyl 99.9 1E-21 3.5E-26 147.3 11.5 157 7-173 44-210 (279)
47 3g2m_A PCZA361.24; SAM-depende 99.9 1.8E-21 6E-26 147.5 12.8 175 5-183 68-290 (299)
48 3vc1_A Geranyl diphosphate 2-C 99.9 1.8E-21 6.2E-26 148.2 12.4 155 8-173 104-269 (312)
49 2ex4_A Adrenal gland protein A 99.9 6.9E-22 2.4E-26 145.2 9.5 138 21-174 79-226 (241)
50 3jwg_A HEN1, methyltransferase 99.9 3.4E-21 1.2E-25 139.5 12.9 156 5-169 14-188 (219)
51 4fsd_A Arsenic methyltransfera 99.9 2.6E-21 9E-26 151.3 12.9 144 20-172 82-250 (383)
52 3ocj_A Putative exported prote 99.9 3.6E-21 1.2E-25 146.2 13.2 165 19-184 116-303 (305)
53 2p35_A Trans-aconitate 2-methy 99.9 2.1E-21 7.2E-26 143.8 11.6 154 5-167 18-184 (259)
54 3jwh_A HEN1; methyltransferase 99.9 2.2E-21 7.5E-26 140.4 10.8 154 6-168 15-187 (217)
55 1ve3_A Hypothetical protein PH 99.9 2.4E-21 8.1E-26 140.8 10.4 171 8-184 28-226 (227)
56 3bxo_A N,N-dimethyltransferase 99.9 2.8E-21 9.7E-26 141.4 10.6 163 20-184 39-238 (239)
57 3bkx_A SAM-dependent methyltra 99.9 8.3E-21 2.9E-25 141.9 12.8 166 5-173 28-219 (275)
58 3lcc_A Putative methyl chlorid 99.9 3.6E-21 1.2E-25 140.8 10.4 142 10-174 57-208 (235)
59 3g5l_A Putative S-adenosylmeth 99.8 1.1E-20 3.6E-25 139.7 11.9 160 10-173 34-216 (253)
60 4htf_A S-adenosylmethionine-de 99.8 9.2E-21 3.2E-25 142.5 11.6 158 10-173 59-232 (285)
61 3bkw_A MLL3908 protein, S-aden 99.8 3.5E-20 1.2E-24 135.9 14.0 160 10-173 33-214 (243)
62 2qe6_A Uncharacterized protein 99.8 4.6E-20 1.6E-24 138.1 14.2 155 6-169 62-238 (274)
63 2yqz_A Hypothetical protein TT 99.8 1E-20 3.6E-25 140.3 10.6 159 7-172 21-195 (263)
64 4hg2_A Methyltransferase type 99.8 3.3E-20 1.1E-24 137.6 12.0 108 6-121 27-138 (257)
65 3e8s_A Putative SAM dependent 99.8 9.5E-21 3.2E-25 137.4 8.5 158 9-172 41-208 (227)
66 2xvm_A Tellurite resistance pr 99.8 9.2E-20 3.1E-24 129.8 13.4 142 10-172 22-172 (199)
67 2p8j_A S-adenosylmethionine-de 99.8 1.2E-20 4.1E-25 135.5 8.3 162 9-171 11-181 (209)
68 1y8c_A S-adenosylmethionine-de 99.8 1.6E-20 5.6E-25 137.8 9.0 165 7-173 22-225 (246)
69 3sm3_A SAM-dependent methyltra 99.8 9.4E-20 3.2E-24 132.8 13.0 149 19-173 28-207 (235)
70 3ggd_A SAM-dependent methyltra 99.8 9.2E-20 3.2E-24 134.1 11.5 158 11-172 46-218 (245)
71 1vlm_A SAM-dependent methyltra 99.8 3.2E-19 1.1E-23 129.2 13.9 136 22-173 48-188 (219)
72 3cgg_A SAM-dependent methyltra 99.8 3.8E-19 1.3E-23 125.9 13.9 132 11-173 38-175 (195)
73 2gb4_A Thiopurine S-methyltran 99.8 1.6E-19 5.4E-24 133.6 12.3 133 19-172 66-226 (252)
74 3g07_A 7SK snRNA methylphospha 99.8 9.3E-21 3.2E-25 143.1 5.7 145 21-173 46-269 (292)
75 4e2x_A TCAB9; kijanose, tetron 99.8 1.3E-20 4.4E-25 148.8 5.9 154 5-174 92-254 (416)
76 3cc8_A Putative methyltransfer 99.8 4E-20 1.4E-24 134.3 7.9 158 8-174 21-186 (230)
77 3thr_A Glycine N-methyltransfe 99.8 2.8E-20 9.5E-25 140.3 6.6 112 6-120 43-177 (293)
78 3d2l_A SAM-dependent methyltra 99.8 4.7E-19 1.6E-23 129.9 12.3 106 7-118 22-137 (243)
79 2aot_A HMT, histamine N-methyl 99.8 1.4E-19 4.9E-24 136.5 9.1 142 20-170 51-218 (292)
80 3g5t_A Trans-aconitate 3-methy 99.8 3.9E-19 1.3E-23 134.5 10.7 153 6-166 23-197 (299)
81 1wzn_A SAM-dependent methyltra 99.8 1.7E-18 5.9E-23 127.7 13.3 108 9-119 30-146 (252)
82 2i62_A Nicotinamide N-methyltr 99.8 2.6E-19 8.8E-24 132.9 8.8 141 19-174 54-240 (265)
83 1ri5_A MRNA capping enzyme; me 99.8 2.1E-19 7.3E-24 135.5 8.3 154 19-173 62-250 (298)
84 3q87_B N6 adenine specific DNA 99.8 7.1E-18 2.4E-22 117.7 15.3 128 10-174 11-150 (170)
85 2a14_A Indolethylamine N-methy 99.8 1.1E-19 3.7E-24 135.3 6.4 140 19-173 53-238 (263)
86 2zfu_A Nucleomethylin, cerebra 99.8 1.1E-18 3.7E-23 125.9 11.4 131 10-184 56-190 (215)
87 3mq2_A 16S rRNA methyltransfer 99.8 6.6E-19 2.2E-23 127.4 10.1 152 8-173 15-184 (218)
88 3e05_A Precorrin-6Y C5,15-meth 99.8 4.4E-18 1.5E-22 121.9 14.0 130 5-170 25-164 (204)
89 2kw5_A SLR1183 protein; struct 99.8 3.3E-18 1.1E-22 122.2 12.4 143 8-173 20-171 (202)
90 3m70_A Tellurite resistance pr 99.8 2.2E-18 7.5E-23 129.5 12.0 141 10-171 110-258 (286)
91 2g72_A Phenylethanolamine N-me 99.8 2.1E-19 7.2E-24 135.4 6.3 150 9-173 58-256 (289)
92 1dus_A MJ0882; hypothetical pr 99.8 6.8E-18 2.3E-22 119.4 12.7 144 7-184 39-193 (194)
93 2gs9_A Hypothetical protein TT 99.8 3.6E-18 1.2E-22 122.8 11.3 143 10-172 27-177 (211)
94 3giw_A Protein of unknown func 99.8 4E-18 1.4E-22 126.4 11.6 158 4-169 61-243 (277)
95 1fbn_A MJ fibrillarin homologu 99.8 1E-17 3.4E-22 122.3 13.5 151 7-183 58-226 (230)
96 3hm2_A Precorrin-6Y C5,15-meth 99.8 8E-18 2.7E-22 117.7 12.5 129 5-170 10-150 (178)
97 3grz_A L11 mtase, ribosomal pr 99.8 4.6E-18 1.6E-22 121.8 11.3 130 19-183 58-195 (205)
98 3orh_A Guanidinoacetate N-meth 99.8 4.5E-19 1.5E-23 130.0 5.4 148 3-170 44-207 (236)
99 3ofk_A Nodulation protein S; N 99.7 2.9E-18 1E-22 123.7 8.3 107 11-120 42-156 (216)
100 4dzr_A Protein-(glutamine-N5) 99.7 3.3E-18 1.1E-22 122.9 7.1 141 5-174 14-193 (215)
101 2b3t_A Protein methyltransfera 99.7 6.5E-17 2.2E-21 121.1 14.4 147 5-183 95-274 (276)
102 3p2e_A 16S rRNA methylase; met 99.7 1.3E-17 4.6E-22 121.3 10.2 154 10-174 15-186 (225)
103 3njr_A Precorrin-6Y methylase; 99.7 9.8E-17 3.4E-21 115.1 14.4 127 6-171 41-178 (204)
104 1zx0_A Guanidinoacetate N-meth 99.7 2.8E-18 9.6E-23 125.6 6.2 145 5-167 46-204 (236)
105 3htx_A HEN1; HEN1, small RNA m 99.7 3.1E-17 1.1E-21 136.2 12.8 113 7-121 708-837 (950)
106 3uwp_A Histone-lysine N-methyl 99.7 2E-17 6.7E-22 128.5 10.9 117 4-124 157-294 (438)
107 4df3_A Fibrillarin-like rRNA/T 99.7 3E-17 1E-21 119.4 11.1 144 7-175 61-219 (233)
108 2vdw_A Vaccinia virus capping 99.7 9.3E-18 3.2E-22 127.2 8.3 151 21-172 48-245 (302)
109 1nt2_A Fibrillarin-like PRE-rR 99.7 1E-16 3.5E-21 115.5 12.8 136 19-183 55-208 (210)
110 3iv6_A Putative Zn-dependent a 99.7 2.1E-17 7.1E-22 122.4 9.1 109 7-119 32-149 (261)
111 3id6_C Fibrillarin-like rRNA/T 99.7 1.5E-16 5.2E-21 115.9 13.1 157 3-183 56-229 (232)
112 3bgv_A MRNA CAP guanine-N7 met 99.7 3.2E-17 1.1E-21 124.8 8.7 112 8-120 20-157 (313)
113 3mti_A RRNA methylase; SAM-dep 99.7 8.6E-17 2.9E-21 113.3 10.0 110 7-120 10-137 (185)
114 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.4E-16 4.7E-21 115.0 10.9 98 21-118 41-156 (214)
115 1l3i_A Precorrin-6Y methyltran 99.7 9.7E-17 3.3E-21 113.2 9.8 127 4-167 17-154 (192)
116 3evz_A Methyltransferase; NYSG 99.7 2.3E-16 7.8E-21 114.8 12.1 126 19-173 53-206 (230)
117 1g8a_A Fibrillarin-like PRE-rR 99.7 7.2E-16 2.5E-20 112.1 14.2 152 7-184 57-226 (227)
118 3m33_A Uncharacterized protein 99.7 3E-17 1E-21 119.5 5.9 125 7-173 36-167 (226)
119 3mb5_A SAM-dependent methyltra 99.7 2E-16 6.8E-21 116.9 10.1 129 8-173 81-222 (255)
120 2nxc_A L11 mtase, ribosomal pr 99.7 3.3E-16 1.1E-20 115.9 11.2 125 19-179 118-250 (254)
121 3fpf_A Mtnas, putative unchara 99.7 4.5E-16 1.5E-20 116.6 11.9 99 14-118 116-222 (298)
122 2fca_A TRNA (guanine-N(7)-)-me 99.7 1.7E-16 5.8E-21 114.5 9.1 98 21-118 38-153 (213)
123 2pxx_A Uncharacterized protein 99.7 1.3E-16 4.4E-21 114.6 8.4 101 19-120 40-161 (215)
124 1xdz_A Methyltransferase GIDB; 99.7 1.8E-16 6.2E-21 116.3 9.2 121 19-172 68-201 (240)
125 2ipx_A RRNA 2'-O-methyltransfe 99.7 2.3E-16 7.8E-21 115.2 9.1 143 15-182 72-229 (233)
126 1yb2_A Hypothetical protein TA 99.7 5.7E-17 1.9E-21 121.3 6.0 125 11-172 101-236 (275)
127 3dxy_A TRNA (guanine-N(7)-)-me 99.7 6.4E-17 2.2E-21 117.2 5.9 98 21-118 34-150 (218)
128 2yxd_A Probable cobalt-precorr 99.7 6.7E-16 2.3E-20 108.1 10.8 127 4-170 19-154 (183)
129 3eey_A Putative rRNA methylase 99.7 1.8E-16 6.1E-21 112.8 7.8 102 19-120 20-141 (197)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.7 5.1E-16 1.8E-20 114.7 10.2 129 8-173 84-224 (258)
131 1af7_A Chemotaxis receptor met 99.7 1.5E-16 5.2E-21 118.7 6.9 97 21-117 105-251 (274)
132 3fzg_A 16S rRNA methylase; met 99.6 4.1E-16 1.4E-20 109.2 8.1 106 8-118 39-152 (200)
133 3hp7_A Hemolysin, putative; st 99.6 5.6E-16 1.9E-20 116.1 9.4 151 8-174 72-233 (291)
134 4dcm_A Ribosomal RNA large sub 99.6 3.3E-16 1.1E-20 122.0 8.1 110 8-118 210-334 (375)
135 3bwc_A Spermidine synthase; SA 99.6 1.2E-15 4.2E-20 115.7 11.0 140 9-173 81-240 (304)
136 3lpm_A Putative methyltransfer 99.6 2.8E-15 9.6E-20 111.2 12.3 139 13-183 41-217 (259)
137 3p9n_A Possible methyltransfer 99.6 2.5E-15 8.7E-20 106.2 11.3 116 5-122 26-157 (189)
138 2avn_A Ubiquinone/menaquinone 99.6 6.1E-16 2.1E-20 114.7 8.4 98 20-121 53-155 (260)
139 2pjd_A Ribosomal RNA small sub 99.6 2.8E-16 9.4E-21 121.1 6.3 112 8-120 184-305 (343)
140 2ld4_A Anamorsin; methyltransf 99.6 5.1E-16 1.7E-20 108.6 6.9 109 19-165 10-128 (176)
141 3opn_A Putative hemolysin; str 99.6 5.1E-16 1.7E-20 113.4 7.1 151 8-174 24-185 (232)
142 2h00_A Methyltransferase 10 do 99.6 1.8E-17 6.2E-22 122.6 -0.6 145 21-174 65-239 (254)
143 1o9g_A RRNA methyltransferase; 99.6 1.6E-15 5.5E-20 111.9 9.2 113 7-120 38-216 (250)
144 2plw_A Ribosomal RNA methyltra 99.6 6.9E-15 2.4E-19 104.8 12.2 106 9-118 10-154 (201)
145 1ej0_A FTSJ; methyltransferase 99.6 3.9E-15 1.3E-19 103.5 10.6 110 7-120 8-138 (180)
146 3lbf_A Protein-L-isoaspartate 99.6 1.1E-15 3.6E-20 109.8 7.9 105 5-120 62-176 (210)
147 3g89_A Ribosomal RNA small sub 99.6 5.5E-16 1.9E-20 114.4 6.5 121 20-173 79-212 (249)
148 1u2z_A Histone-lysine N-methyl 99.6 5.2E-15 1.8E-19 116.6 12.3 115 6-124 228-365 (433)
149 1jsx_A Glucose-inhibited divis 99.6 7.6E-16 2.6E-20 110.3 6.9 104 7-117 49-164 (207)
150 1o54_A SAM-dependent O-methylt 99.6 1.1E-15 3.9E-20 114.3 8.1 128 9-173 101-239 (277)
151 2y1w_A Histone-arginine methyl 99.6 6.1E-16 2.1E-20 119.4 6.6 108 8-117 38-154 (348)
152 3duw_A OMT, O-methyltransferas 99.6 3.4E-15 1.1E-19 108.2 9.8 99 19-122 56-171 (223)
153 3kr9_A SAM-dependent methyltra 99.6 1.9E-14 6.4E-19 104.2 13.2 130 19-183 13-156 (225)
154 2yxe_A Protein-L-isoaspartate 99.6 2.2E-15 7.6E-20 108.5 7.8 105 6-119 63-178 (215)
155 2frn_A Hypothetical protein PH 99.6 9E-15 3.1E-19 109.6 10.9 121 19-169 123-253 (278)
156 3lec_A NADB-rossmann superfami 99.6 2.6E-14 8.8E-19 103.6 12.9 130 19-183 19-162 (230)
157 3u81_A Catechol O-methyltransf 99.6 1.8E-15 6.3E-20 109.6 6.5 99 19-120 56-172 (221)
158 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3.5E-15 1.2E-19 109.2 7.8 99 20-118 45-168 (235)
159 2ozv_A Hypothetical protein AT 99.6 7.6E-15 2.6E-19 109.0 9.7 104 13-117 29-169 (260)
160 3ntv_A MW1564 protein; rossman 99.6 1.5E-15 5.2E-20 110.9 5.8 107 9-121 60-179 (232)
161 3r3h_A O-methyltransferase, SA 99.6 5.8E-15 2E-19 108.5 8.9 100 19-123 58-175 (242)
162 1dl5_A Protein-L-isoaspartate 99.6 3.4E-15 1.2E-19 113.8 7.8 104 7-119 62-176 (317)
163 2bm8_A Cephalosporin hydroxyla 99.6 1.3E-14 4.3E-19 106.3 10.4 94 21-119 81-188 (236)
164 3sso_A Methyltransferase; macr 99.6 2.5E-15 8.6E-20 116.5 6.8 108 7-122 204-328 (419)
165 1vbf_A 231AA long hypothetical 99.6 5.4E-15 1.8E-19 107.6 8.1 105 5-120 55-167 (231)
166 3b3j_A Histone-arginine methyl 99.6 3E-15 1E-19 119.9 7.3 108 7-116 145-261 (480)
167 1p91_A Ribosomal RNA large sub 99.6 6.5E-15 2.2E-19 109.6 8.3 94 20-122 84-182 (269)
168 2fhp_A Methylase, putative; al 99.6 4.7E-15 1.6E-19 104.3 7.1 114 4-121 27-157 (187)
169 1jg1_A PIMT;, protein-L-isoasp 99.6 4.3E-15 1.5E-19 108.6 6.9 106 5-120 76-191 (235)
170 3tfw_A Putative O-methyltransf 99.6 1.1E-14 3.7E-19 107.4 9.0 99 19-122 61-174 (248)
171 3gnl_A Uncharacterized protein 99.6 4.8E-14 1.6E-18 103.0 12.1 130 19-183 19-162 (244)
172 2esr_A Methyltransferase; stru 99.6 2.4E-15 8.3E-20 105.1 5.1 114 5-122 15-142 (177)
173 3lcv_B Sisomicin-gentamicin re 99.6 6E-15 2E-19 107.9 7.0 132 20-171 131-270 (281)
174 3tma_A Methyltransferase; thum 99.6 3.1E-14 1E-18 110.1 11.3 114 4-118 187-317 (354)
175 3r0q_C Probable protein argini 99.6 5E-15 1.7E-19 115.4 6.7 109 9-119 52-170 (376)
176 2fyt_A Protein arginine N-meth 99.6 1.1E-14 3.8E-19 112.0 8.5 105 9-115 53-168 (340)
177 3q7e_A Protein arginine N-meth 99.5 3.5E-15 1.2E-19 115.3 5.5 97 19-116 64-171 (349)
178 3dmg_A Probable ribosomal RNA 99.5 1.7E-14 6E-19 112.4 9.3 96 21-118 233-340 (381)
179 1i9g_A Hypothetical protein RV 99.5 3.3E-14 1.1E-18 106.3 9.8 104 8-119 87-204 (280)
180 2gpy_A O-methyltransferase; st 99.5 7E-15 2.4E-19 107.3 5.9 108 8-121 42-163 (233)
181 3dou_A Ribosomal RNA large sub 99.5 1.2E-13 4.2E-18 97.9 11.5 109 5-119 9-140 (191)
182 2b25_A Hypothetical protein; s 99.5 1.4E-14 4.7E-19 111.3 6.8 104 9-120 94-221 (336)
183 2oxt_A Nucleoside-2'-O-methylt 99.5 6.2E-14 2.1E-18 104.2 9.9 107 9-120 63-187 (265)
184 3tr6_A O-methyltransferase; ce 99.5 5.6E-15 1.9E-19 107.1 4.1 99 19-122 62-178 (225)
185 1nv8_A HEMK protein; class I a 99.5 4.6E-14 1.6E-18 106.0 9.2 110 5-116 108-247 (284)
186 1ws6_A Methyltransferase; stru 99.5 8.2E-15 2.8E-19 101.6 4.6 112 5-122 24-151 (171)
187 3dr5_A Putative O-methyltransf 99.5 8.9E-15 3.1E-19 106.1 4.9 108 8-121 44-166 (221)
188 2wa2_A Non-structural protein 99.5 5.4E-14 1.9E-18 105.1 8.7 104 10-119 72-194 (276)
189 1r18_A Protein-L-isoaspartate( 99.5 2.2E-14 7.5E-19 104.3 6.4 106 6-119 68-195 (227)
190 3adn_A Spermidine synthase; am 99.5 4.5E-14 1.5E-18 106.5 8.2 99 20-118 82-198 (294)
191 2hnk_A SAM-dependent O-methylt 99.5 4.7E-14 1.6E-18 103.3 8.0 106 10-121 50-184 (239)
192 2ift_A Putative methylase HI07 99.5 7.5E-15 2.5E-19 105.0 3.6 111 7-121 39-166 (201)
193 2nyu_A Putative ribosomal RNA 99.5 2.9E-13 9.8E-18 95.9 11.6 107 9-119 10-146 (196)
194 1g6q_1 HnRNP arginine N-methyl 99.5 2.2E-14 7.6E-19 109.8 6.2 107 8-116 26-143 (328)
195 2vdv_E TRNA (guanine-N(7)-)-me 99.5 1.5E-14 5.2E-19 106.4 5.1 94 20-118 48-173 (246)
196 1ixk_A Methyltransferase; open 99.5 1.2E-13 4.3E-18 105.1 10.0 110 9-119 107-247 (315)
197 3bzb_A Uncharacterized protein 99.5 2.1E-13 7.2E-18 102.3 11.0 108 6-117 65-204 (281)
198 3gjy_A Spermidine synthase; AP 99.5 4.1E-14 1.4E-18 107.1 7.2 98 22-119 90-201 (317)
199 2yvl_A TRMI protein, hypotheti 99.5 1.6E-13 5.4E-18 100.7 9.9 101 9-119 80-191 (248)
200 3c3p_A Methyltransferase; NP_9 99.5 3.7E-14 1.3E-18 101.8 5.8 97 20-121 55-163 (210)
201 3gdh_A Trimethylguanosine synt 99.5 9.3E-16 3.2E-20 112.4 -2.7 145 9-174 66-220 (241)
202 1sui_A Caffeoyl-COA O-methyltr 99.5 3.9E-14 1.3E-18 104.4 5.9 98 19-121 77-193 (247)
203 2pbf_A Protein-L-isoaspartate 99.5 8.4E-14 2.9E-18 101.0 7.6 106 7-120 65-195 (227)
204 2fpo_A Methylase YHHF; structu 99.5 6.1E-14 2.1E-18 100.3 6.0 112 5-121 38-163 (202)
205 1i1n_A Protein-L-isoaspartate 99.4 2E-13 7E-18 98.9 7.9 104 8-119 63-183 (226)
206 2p41_A Type II methyltransfera 99.4 3.1E-13 1E-17 102.4 9.0 97 19-118 80-191 (305)
207 1zq9_A Probable dimethyladenos 99.4 9.5E-14 3.2E-18 104.4 6.1 107 5-115 13-144 (285)
208 2qm3_A Predicted methyltransfe 99.4 9.6E-13 3.3E-17 102.4 11.9 95 21-119 172-278 (373)
209 3cbg_A O-methyltransferase; cy 99.4 8.4E-14 2.9E-18 101.6 4.9 98 20-122 71-186 (232)
210 2avd_A Catechol-O-methyltransf 99.4 8.1E-14 2.8E-18 101.2 4.7 98 19-121 67-182 (229)
211 2i7c_A Spermidine synthase; tr 99.4 1.2E-13 4.1E-18 103.7 5.6 110 9-118 64-192 (283)
212 1xj5_A Spermidine synthase 1; 99.4 1.3E-13 4.3E-18 105.7 5.5 109 9-117 106-234 (334)
213 3tm4_A TRNA (guanine N2-)-meth 99.4 1.3E-12 4.3E-17 101.8 11.0 134 5-174 203-353 (373)
214 3a27_A TYW2, uncharacterized p 99.4 2.5E-13 8.5E-18 101.4 6.7 97 19-121 117-222 (272)
215 2o07_A Spermidine synthase; st 99.4 2E-13 6.8E-18 103.4 6.1 111 8-118 80-209 (304)
216 3c3y_A Pfomt, O-methyltransfer 99.4 1.8E-13 6.3E-18 100.1 5.7 98 19-121 68-184 (237)
217 3frh_A 16S rRNA methylase; met 99.4 5E-13 1.7E-17 96.8 6.9 96 19-118 103-206 (253)
218 4azs_A Methyltransferase WBDD; 99.4 7.8E-14 2.7E-18 114.1 3.1 101 19-121 64-176 (569)
219 1ne2_A Hypothetical protein TA 99.4 9.6E-13 3.3E-17 93.7 8.3 88 19-108 49-139 (200)
220 2igt_A SAM dependent methyltra 99.4 2.5E-12 8.5E-17 98.5 10.5 110 9-120 141-274 (332)
221 1uir_A Polyamine aminopropyltr 99.4 2.9E-13 9.9E-18 103.0 5.0 99 20-118 76-195 (314)
222 1wy7_A Hypothetical protein PH 99.4 7E-12 2.4E-16 89.5 11.9 133 7-171 33-173 (207)
223 1mjf_A Spermidine synthase; sp 99.4 4.5E-13 1.5E-17 100.5 5.9 98 20-118 74-193 (281)
224 2xyq_A Putative 2'-O-methyl tr 99.4 2.8E-12 9.5E-17 96.2 9.9 116 19-171 61-195 (290)
225 1qam_A ERMC' methyltransferase 99.4 9.2E-13 3.1E-17 96.9 7.2 108 5-115 15-143 (244)
226 3ajd_A Putative methyltransfer 99.4 3E-13 1E-17 101.1 4.5 109 12-121 75-214 (274)
227 2b2c_A Spermidine synthase; be 99.4 2E-13 7E-18 103.8 3.6 98 20-118 107-222 (314)
228 1iy9_A Spermidine synthase; ro 99.4 3.7E-13 1.3E-17 100.6 4.6 99 20-118 74-189 (275)
229 1inl_A Spermidine synthase; be 99.4 5.1E-13 1.7E-17 100.9 5.3 98 20-117 89-204 (296)
230 2pt6_A Spermidine synthase; tr 99.4 3.5E-13 1.2E-17 102.8 4.4 98 20-118 115-230 (321)
231 4hc4_A Protein arginine N-meth 99.4 5E-13 1.7E-17 103.6 5.3 95 21-116 83-187 (376)
232 2ih2_A Modification methylase 99.4 4.1E-12 1.4E-16 100.1 10.5 112 5-120 24-166 (421)
233 1yub_A Ermam, rRNA methyltrans 99.4 2E-13 7E-18 100.4 2.7 110 5-117 14-144 (245)
234 2cmg_A Spermidine synthase; tr 99.4 1.4E-12 4.8E-17 96.8 7.1 101 8-117 57-170 (262)
235 2yxl_A PH0851 protein, 450AA l 99.3 5E-12 1.7E-16 100.7 9.6 112 9-121 248-392 (450)
236 2h1r_A Dimethyladenosine trans 99.3 4E-12 1.4E-16 96.1 8.0 104 5-112 27-153 (299)
237 2f8l_A Hypothetical protein LM 99.3 3.7E-12 1.3E-16 98.1 6.6 108 12-119 121-257 (344)
238 1sqg_A SUN protein, FMU protei 99.3 1.1E-11 3.8E-16 98.1 9.2 113 7-120 233-376 (429)
239 3k6r_A Putative transferase PH 99.2 2.7E-11 9.1E-16 90.4 8.9 120 19-168 123-252 (278)
240 3m6w_A RRNA methylase; rRNA me 99.2 1E-11 3.5E-16 98.7 6.2 108 10-119 91-230 (464)
241 2frx_A Hypothetical protein YE 99.2 3.7E-11 1.3E-15 96.1 9.4 106 13-119 108-247 (479)
242 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.8E-11 6.3E-16 97.1 7.4 109 10-119 95-235 (456)
243 3b5i_A S-adenosyl-L-methionine 99.2 5.2E-10 1.8E-14 86.6 14.5 164 8-172 35-297 (374)
244 4dmg_A Putative uncharacterize 99.2 1.7E-10 5.8E-15 90.2 11.1 107 9-119 204-327 (393)
245 3gru_A Dimethyladenosine trans 99.2 7.9E-11 2.7E-15 88.6 8.0 83 5-90 35-125 (295)
246 3ftd_A Dimethyladenosine trans 99.2 1.3E-10 4.5E-15 85.5 8.7 89 5-95 16-110 (249)
247 1uwv_A 23S rRNA (uracil-5-)-me 99.1 3E-10 1E-14 90.0 11.0 103 6-117 272-388 (433)
248 2b78_A Hypothetical protein SM 99.1 4.8E-11 1.7E-15 93.2 6.1 99 20-119 211-332 (385)
249 3fut_A Dimethyladenosine trans 99.1 2.2E-10 7.5E-15 85.2 8.6 94 5-103 32-133 (271)
250 3k0b_A Predicted N6-adenine-sp 99.1 2.7E-10 9.2E-15 89.1 9.5 115 4-119 185-351 (393)
251 1wxx_A TT1595, hypothetical pr 99.1 5.2E-11 1.8E-15 92.9 5.3 97 21-119 209-326 (382)
252 3ldg_A Putative uncharacterize 99.1 4.5E-10 1.5E-14 87.5 10.5 115 4-119 178-344 (384)
253 2as0_A Hypothetical protein PH 99.1 4.8E-11 1.6E-15 93.5 4.9 99 20-119 216-336 (396)
254 3ldu_A Putative methylase; str 99.1 2E-10 6.9E-15 89.6 8.2 114 5-119 180-345 (385)
255 2okc_A Type I restriction enzy 99.1 5.2E-11 1.8E-15 94.7 4.8 114 5-119 156-308 (445)
256 3c0k_A UPF0064 protein YCCW; P 99.1 3.1E-10 1.1E-14 88.9 9.0 99 20-119 219-340 (396)
257 2yx1_A Hypothetical protein MJ 99.1 8.8E-11 3E-15 90.1 5.7 93 19-120 193-293 (336)
258 1qyr_A KSGA, high level kasuga 99.1 1.3E-10 4.5E-15 85.6 6.4 88 5-95 6-105 (252)
259 3uzu_A Ribosomal RNA small sub 99.1 7.6E-11 2.6E-15 88.1 4.5 73 5-78 27-105 (279)
260 3tqs_A Ribosomal RNA small sub 99.1 2.8E-10 9.7E-15 84.0 6.7 71 5-78 14-90 (255)
261 3evf_A RNA-directed RNA polyme 99.1 1.1E-09 3.7E-14 80.6 9.7 108 9-117 63-183 (277)
262 2jjq_A Uncharacterized RNA met 99.0 9.3E-10 3.2E-14 86.9 9.4 91 20-117 289-386 (425)
263 1m6e_X S-adenosyl-L-methionnin 99.0 8.3E-09 2.9E-13 79.4 13.7 151 20-170 50-277 (359)
264 2efj_A 3,7-dimethylxanthine me 99.0 6.5E-09 2.2E-13 80.6 12.6 150 22-171 53-290 (384)
265 3v97_A Ribosomal RNA large sub 99.0 9.7E-10 3.3E-14 91.8 7.0 98 21-119 539-658 (703)
266 2qfm_A Spermine synthase; sper 99.0 3.5E-10 1.2E-14 86.8 3.9 98 20-118 187-314 (364)
267 3o4f_A Spermidine synthase; am 98.9 4E-09 1.4E-13 78.9 7.6 110 6-118 66-198 (294)
268 2qy6_A UPF0209 protein YFCK; s 98.9 1.9E-09 6.6E-14 79.5 5.2 118 21-171 60-233 (257)
269 1rjd_A PPM1P, carboxy methyl t 98.9 1.3E-08 4.4E-13 77.9 9.3 144 20-166 96-281 (334)
270 1m6y_A S-adenosyl-methyltransf 98.8 3.5E-09 1.2E-13 79.9 5.9 81 6-87 12-106 (301)
271 3gcz_A Polyprotein; flavivirus 98.8 7.1E-09 2.4E-13 76.4 7.1 108 9-118 79-201 (282)
272 3bt7_A TRNA (uracil-5-)-methyl 98.8 1.7E-09 5.8E-14 84.0 4.0 101 6-118 200-326 (369)
273 2b9e_A NOL1/NOP2/SUN domain fa 98.8 1.8E-08 6.3E-13 76.3 8.7 107 11-119 93-235 (309)
274 4gqb_A Protein arginine N-meth 98.8 3.2E-09 1.1E-13 87.1 4.4 110 6-115 339-464 (637)
275 2r6z_A UPF0341 protein in RSP 98.8 1.7E-08 5.8E-13 74.6 7.6 105 12-121 75-219 (258)
276 3ua3_A Protein arginine N-meth 98.8 1E-08 3.5E-13 84.4 6.5 95 21-115 409-531 (745)
277 2dul_A N(2),N(2)-dimethylguano 98.7 1.3E-08 4.6E-13 79.1 6.4 92 21-118 47-164 (378)
278 3v97_A Ribosomal RNA large sub 98.7 6E-08 2E-12 81.1 9.0 115 4-119 174-348 (703)
279 2ar0_A M.ecoki, type I restric 98.7 2.3E-08 7.7E-13 81.3 5.4 113 6-119 155-313 (541)
280 3axs_A Probable N(2),N(2)-dime 98.6 3E-08 1E-12 77.3 4.4 93 20-118 51-158 (392)
281 3eld_A Methyltransferase; flav 98.6 5.1E-07 1.7E-11 67.1 10.5 108 9-118 70-191 (300)
282 3p8z_A Mtase, non-structural p 98.6 5.5E-07 1.9E-11 64.6 9.8 109 6-116 64-184 (267)
283 3s1s_A Restriction endonucleas 98.5 1.8E-06 6E-11 72.5 11.6 114 6-119 301-466 (878)
284 2px2_A Genome polyprotein [con 98.5 1.1E-06 3.7E-11 64.0 9.0 111 8-119 61-184 (269)
285 2k4m_A TR8_protein, UPF0146 pr 98.4 1.7E-06 5.7E-11 57.7 8.2 96 8-123 25-126 (153)
286 3cvo_A Methyltransferase-like 98.4 8.7E-07 3E-11 62.8 7.2 89 20-118 29-154 (202)
287 2vz8_A Fatty acid synthase; tr 98.4 1.7E-07 6E-12 87.4 4.2 142 21-172 1240-1394(2512)
288 2oyr_A UPF0341 protein YHIQ; a 98.4 1.1E-07 3.9E-12 70.0 2.4 79 10-91 76-176 (258)
289 3khk_A Type I restriction-modi 98.4 1.1E-07 3.9E-12 77.2 2.3 113 5-119 230-396 (544)
290 4auk_A Ribosomal RNA large sub 98.3 3.5E-06 1.2E-10 64.8 10.0 70 19-90 209-281 (375)
291 3lkz_A Non-structural protein 98.3 4.6E-06 1.6E-10 61.8 10.0 107 8-116 82-202 (321)
292 2uyo_A Hypothetical protein ML 98.3 2.4E-06 8.1E-11 64.7 7.6 145 20-168 101-274 (310)
293 2wk1_A NOVP; transferase, O-me 98.3 2.7E-06 9.2E-11 63.4 7.6 105 10-118 95-244 (282)
294 3lkd_A Type I restriction-modi 98.3 3.6E-06 1.2E-10 68.3 8.8 113 6-119 203-359 (542)
295 3c6k_A Spermine synthase; sper 98.3 7E-07 2.4E-11 68.9 4.3 108 9-117 192-330 (381)
296 3iei_A Leucine carboxyl methyl 98.3 0.00016 5.6E-09 55.1 17.3 146 21-173 90-281 (334)
297 3ll7_A Putative methyltransfer 98.2 9.6E-07 3.3E-11 69.1 3.6 66 19-86 91-170 (410)
298 1wg8_A Predicted S-adenosylmet 98.2 3.6E-06 1.2E-10 62.3 6.1 79 5-86 7-96 (285)
299 2zwa_A Leucine carboxyl methyl 98.0 8E-05 2.8E-09 62.3 11.4 147 21-172 107-308 (695)
300 3vyw_A MNMC2; tRNA wobble urid 97.9 7E-05 2.4E-09 56.2 9.0 122 21-175 96-250 (308)
301 1i4w_A Mitochondrial replicati 97.8 2.4E-05 8.4E-10 60.1 5.7 70 5-75 37-116 (353)
302 3tka_A Ribosomal RNA small sub 97.8 7.1E-05 2.4E-09 56.8 7.3 68 7-75 44-115 (347)
303 4fzv_A Putative methyltransfer 97.8 3.9E-05 1.3E-09 59.1 6.0 109 12-121 140-287 (359)
304 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00019 6.5E-09 53.3 7.5 103 9-118 93-217 (344)
305 2zig_A TTHA0409, putative modi 97.6 6.2E-05 2.1E-09 56.6 4.7 55 5-63 221-276 (297)
306 3ufb_A Type I restriction-modi 97.6 0.00035 1.2E-08 56.6 9.1 114 5-119 202-363 (530)
307 3iht_A S-adenosyl-L-methionine 96.8 0.0031 1E-07 42.3 5.8 112 6-120 27-149 (174)
308 1g60_A Adenine-specific methyl 96.7 0.0021 7.3E-08 47.1 4.9 53 6-62 199-252 (260)
309 3tos_A CALS11; methyltransfera 96.2 0.0064 2.2E-07 44.5 5.0 96 20-119 68-218 (257)
310 3pvc_A TRNA 5-methylaminomethy 95.8 0.0091 3.1E-07 49.9 4.5 118 21-171 58-231 (689)
311 3ps9_A TRNA 5-methylaminomethy 95.1 0.034 1.2E-06 46.3 5.9 117 22-171 67-239 (676)
312 1g55_A DNA cytosine methyltran 95.0 0.14 4.7E-06 39.1 8.6 122 22-169 2-145 (343)
313 3g7u_A Cytosine-specific methy 94.9 0.24 8.3E-06 38.3 9.6 120 23-167 3-145 (376)
314 1pl8_A Human sorbitol dehydrog 94.6 0.25 8.5E-06 37.6 9.1 96 14-119 165-274 (356)
315 2py6_A Methyltransferase FKBM; 94.5 0.079 2.7E-06 41.4 6.1 43 19-61 224-269 (409)
316 3ggo_A Prephenate dehydrogenas 94.4 0.25 8.5E-06 37.1 8.6 88 23-115 34-125 (314)
317 3two_A Mannitol dehydrogenase; 94.4 0.076 2.6E-06 40.4 5.8 95 13-119 169-266 (348)
318 2oo3_A Protein involved in cat 94.3 0.073 2.5E-06 39.4 5.2 95 22-120 92-200 (283)
319 2dph_A Formaldehyde dismutase; 94.3 0.24 8.2E-06 38.4 8.4 100 14-119 179-300 (398)
320 1f8f_A Benzyl alcohol dehydrog 94.2 0.088 3E-06 40.4 5.8 98 14-120 184-291 (371)
321 3s2e_A Zinc-containing alcohol 94.0 0.15 5.1E-06 38.6 6.7 96 14-119 160-264 (340)
322 2g1u_A Hypothetical protein TM 94.0 0.82 2.8E-05 30.2 11.9 96 15-116 12-116 (155)
323 3fwz_A Inner membrane protein 93.9 0.24 8.2E-06 32.3 6.8 88 22-116 7-103 (140)
324 1e3j_A NADP(H)-dependent ketos 93.7 1.1 3.7E-05 33.9 11.1 96 14-119 162-272 (352)
325 1boo_A Protein (N-4 cytosine-s 93.6 0.12 4E-06 39.1 5.3 54 6-63 239-293 (323)
326 1zkd_A DUF185; NESG, RPR58, st 93.3 0.21 7.1E-06 38.8 6.4 37 19-55 78-121 (387)
327 1pqw_A Polyketide synthase; ro 93.2 0.26 9E-06 34.0 6.3 89 19-119 36-138 (198)
328 1uuf_A YAHK, zinc-type alcohol 92.8 0.17 6E-06 38.8 5.4 96 14-119 188-289 (369)
329 4ej6_A Putative zinc-binding d 92.8 0.45 1.5E-05 36.5 7.7 98 14-120 176-286 (370)
330 3uko_A Alcohol dehydrogenase c 92.7 0.47 1.6E-05 36.4 7.8 98 14-120 187-297 (378)
331 3m6i_A L-arabinitol 4-dehydrog 92.6 0.45 1.5E-05 36.2 7.4 97 14-119 173-284 (363)
332 1kol_A Formaldehyde dehydrogen 92.5 0.92 3.2E-05 35.0 9.1 100 15-119 180-301 (398)
333 1lss_A TRK system potassium up 92.1 1.5 5.1E-05 27.9 8.9 87 22-116 4-100 (140)
334 2g5c_A Prephenate dehydrogenas 92.0 1.4 4.8E-05 32.1 9.2 89 23-116 2-94 (281)
335 3fpc_A NADP-dependent alcohol 92.0 0.39 1.3E-05 36.5 6.3 99 13-120 159-268 (352)
336 3b1f_A Putative prephenate deh 91.9 1.3 4.5E-05 32.4 9.0 88 23-115 7-98 (290)
337 1eg2_A Modification methylase 91.9 0.24 8E-06 37.4 4.9 55 5-63 228-286 (319)
338 1cdo_A Alcohol dehydrogenase; 91.8 0.88 3E-05 34.8 8.2 93 19-119 190-295 (374)
339 2jhf_A Alcohol dehydrogenase E 91.7 0.94 3.2E-05 34.6 8.3 93 19-119 189-294 (374)
340 4a2c_A Galactitol-1-phosphate 91.6 1.8 6.2E-05 32.5 9.7 99 13-120 153-262 (346)
341 1p0f_A NADP-dependent alcohol 91.5 0.77 2.6E-05 35.1 7.6 97 14-119 185-294 (373)
342 3jv7_A ADH-A; dehydrogenase, n 91.5 0.37 1.3E-05 36.4 5.7 94 19-120 169-272 (345)
343 3qv2_A 5-cytosine DNA methyltr 91.4 0.33 1.1E-05 36.7 5.4 123 21-170 9-157 (327)
344 4dvj_A Putative zinc-dependent 91.4 0.47 1.6E-05 36.3 6.3 89 21-118 171-270 (363)
345 1e3i_A Alcohol dehydrogenase, 90.9 1 3.5E-05 34.4 7.8 93 19-119 193-298 (376)
346 4b7c_A Probable oxidoreductase 90.8 0.91 3.1E-05 34.1 7.3 96 14-120 143-250 (336)
347 4eez_A Alcohol dehydrogenase 1 90.8 1.2 4.2E-05 33.5 8.0 97 13-118 156-263 (348)
348 3l9w_A Glutathione-regulated p 90.7 1.3 4.4E-05 34.7 8.1 89 21-117 3-101 (413)
349 3qwb_A Probable quinone oxidor 90.5 1.3 4.4E-05 33.2 7.9 91 19-119 146-248 (334)
350 3l4b_C TRKA K+ channel protien 90.4 1.1 3.9E-05 31.3 7.1 86 24-116 2-97 (218)
351 4dcm_A Ribosomal RNA large sub 90.3 2.1 7.2E-05 32.9 9.0 99 12-119 29-137 (375)
352 2hcy_A Alcohol dehydrogenase 1 90.2 0.5 1.7E-05 35.7 5.4 94 14-119 163-270 (347)
353 2fzw_A Alcohol dehydrogenase c 90.2 0.89 3.1E-05 34.7 6.9 93 19-119 188-293 (373)
354 2j3h_A NADP-dependent oxidored 90.2 1.2 4.2E-05 33.5 7.6 89 19-119 153-256 (345)
355 1v3u_A Leukotriene B4 12- hydr 90.1 0.47 1.6E-05 35.6 5.2 89 19-119 143-245 (333)
356 2h6e_A ADH-4, D-arabinose 1-de 90.1 0.47 1.6E-05 35.9 5.2 92 19-119 169-270 (344)
357 1jvb_A NAD(H)-dependent alcoho 89.6 0.6 2.1E-05 35.3 5.4 97 14-119 164-272 (347)
358 2c7p_A Modification methylase 89.5 0.52 1.8E-05 35.7 4.9 122 22-169 11-149 (327)
359 3uog_A Alcohol dehydrogenase; 89.5 0.31 1.1E-05 37.2 3.8 95 15-120 184-289 (363)
360 3ubt_Y Modification methylase 89.4 3.8 0.00013 30.6 9.8 121 23-168 1-138 (331)
361 2dq4_A L-threonine 3-dehydroge 89.4 2.3 8E-05 32.0 8.6 91 15-119 160-263 (343)
362 3ius_A Uncharacterized conserv 89.2 2.9 9.9E-05 30.2 8.8 94 23-119 6-103 (286)
363 1piw_A Hypothetical zinc-type 88.7 0.16 5.6E-06 38.7 1.7 97 15-119 174-277 (360)
364 1vj0_A Alcohol dehydrogenase, 88.7 0.66 2.3E-05 35.6 5.1 93 19-119 193-299 (380)
365 1rjw_A ADH-HT, alcohol dehydro 88.6 1.5 5.1E-05 33.0 7.0 94 14-119 158-262 (339)
366 3llv_A Exopolyphosphatase-rela 88.4 3.5 0.00012 26.4 7.9 63 22-87 6-78 (141)
367 2c0c_A Zinc binding alcohol de 88.1 1.9 6.7E-05 32.7 7.4 92 19-120 161-263 (362)
368 2aef_A Calcium-gated potassium 88.1 5.3 0.00018 28.1 10.1 87 20-116 7-103 (234)
369 3gms_A Putative NADPH:quinone 88.1 0.69 2.4E-05 34.9 4.8 96 14-120 138-245 (340)
370 2zig_A TTHA0409, putative modi 86.5 0.51 1.7E-05 35.0 3.2 53 65-117 21-96 (297)
371 3d4o_A Dipicolinate synthase s 86.1 4.5 0.00015 29.8 8.2 96 11-116 144-242 (293)
372 1yb5_A Quinone oxidoreductase; 86.1 1.4 4.6E-05 33.5 5.5 88 19-118 168-269 (351)
373 3dmg_A Probable ribosomal RNA 85.8 1.1 3.6E-05 34.7 4.7 104 7-118 33-139 (381)
374 2f1k_A Prephenate dehydrogenas 85.5 5.9 0.0002 28.6 8.6 84 24-116 2-89 (279)
375 4f3n_A Uncharacterized ACR, CO 85.2 0.55 1.9E-05 37.0 2.9 45 8-53 125-174 (432)
376 2eih_A Alcohol dehydrogenase; 85.2 1.1 3.7E-05 33.8 4.5 90 19-120 164-267 (343)
377 2cf5_A Atccad5, CAD, cinnamyl 84.7 1.2 4.2E-05 33.8 4.6 96 14-119 173-276 (357)
378 3jyn_A Quinone oxidoreductase; 84.7 1.8 6.1E-05 32.3 5.5 92 19-120 138-241 (325)
379 4eye_A Probable oxidoreductase 84.2 1 3.5E-05 34.0 4.0 91 19-119 157-258 (342)
380 2b5w_A Glucose dehydrogenase; 84.1 2.2 7.6E-05 32.3 5.9 94 14-120 160-275 (357)
381 3d1l_A Putative NADP oxidoredu 83.9 5.3 0.00018 28.7 7.6 88 22-117 10-101 (266)
382 2rir_A Dipicolinate synthase, 83.9 2.8 9.6E-05 31.0 6.2 86 21-116 156-244 (300)
383 4a7p_A UDP-glucose dehydrogena 83.8 6.5 0.00022 31.0 8.5 93 23-117 9-128 (446)
384 1iz0_A Quinone oxidoreductase; 83.8 0.53 1.8E-05 34.8 2.2 90 19-119 123-219 (302)
385 3ip1_A Alcohol dehydrogenase, 83.4 4.6 0.00016 31.2 7.5 96 19-119 211-319 (404)
386 1qor_A Quinone oxidoreductase; 83.3 1.4 4.9E-05 32.8 4.5 89 19-119 138-240 (327)
387 2d8a_A PH0655, probable L-thre 83.2 3.1 0.00011 31.3 6.3 95 14-119 162-268 (348)
388 3goh_A Alcohol dehydrogenase, 83.2 0.64 2.2E-05 34.6 2.4 92 14-118 136-229 (315)
389 1yqd_A Sinapyl alcohol dehydro 83.0 2.6 8.9E-05 32.1 5.9 94 14-119 180-283 (366)
390 4ezb_A Uncharacterized conserv 82.2 9.5 0.00032 28.4 8.6 83 23-116 25-119 (317)
391 3c24_A Putative oxidoreductase 81.4 5.5 0.00019 29.0 7.0 84 23-116 12-99 (286)
392 3fbg_A Putative arginate lyase 80.8 2.6 9E-05 31.7 5.1 88 21-117 150-247 (346)
393 3ew7_A LMO0794 protein; Q8Y8U8 80.0 7.1 0.00024 26.7 6.9 93 24-119 2-103 (221)
394 1wly_A CAAR, 2-haloacrylate re 80.0 4.1 0.00014 30.4 6.0 89 19-119 143-245 (333)
395 3ulk_A Ketol-acid reductoisome 80.0 2.7 9.3E-05 33.3 4.9 90 21-118 36-132 (491)
396 1lnq_A MTHK channels, potassiu 79.9 14 0.00046 27.6 8.8 86 21-116 114-209 (336)
397 1boo_A Protein (N-4 cytosine-s 79.7 1.4 4.8E-05 33.1 3.2 54 65-118 14-84 (323)
398 3p2y_A Alanine dehydrogenase/p 79.6 0.71 2.4E-05 35.7 1.6 92 21-116 183-300 (381)
399 3c85_A Putative glutathione-re 79.5 11 0.00039 25.1 8.3 88 22-117 39-138 (183)
400 4dup_A Quinone oxidoreductase; 79.5 3 0.0001 31.5 5.1 91 19-119 165-266 (353)
401 2zb4_A Prostaglandin reductase 79.3 3.6 0.00012 31.1 5.5 95 14-120 152-262 (357)
402 3me5_A Cytosine-specific methy 79.0 9.3 0.00032 30.5 7.9 53 22-75 88-145 (482)
403 3ce6_A Adenosylhomocysteinase; 78.2 3.1 0.00011 33.4 4.9 88 19-118 271-361 (494)
404 2j8z_A Quinone oxidoreductase; 78.2 4.3 0.00015 30.7 5.6 89 19-119 160-262 (354)
405 4dio_A NAD(P) transhydrogenase 78.1 0.87 3E-05 35.5 1.7 41 21-62 189-231 (405)
406 1id1_A Putative potassium chan 77.8 12 0.0004 24.3 8.7 88 22-116 3-103 (153)
407 3gvp_A Adenosylhomocysteinase 77.7 9.7 0.00033 30.0 7.4 97 9-117 207-306 (435)
408 4h0n_A DNMT2; SAH binding, tra 77.5 1.1 3.9E-05 33.9 2.1 122 23-170 4-146 (333)
409 1x13_A NAD(P) transhydrogenase 77.0 1.2 4.1E-05 34.7 2.2 40 21-61 171-212 (401)
410 1l7d_A Nicotinamide nucleotide 76.3 1.8 6E-05 33.4 3.0 39 21-60 171-211 (384)
411 3mag_A VP39; methylated adenin 75.5 3.6 0.00012 30.6 4.2 33 21-53 60-96 (307)
412 2hwk_A Helicase NSP2; rossman 75.5 4 0.00014 30.3 4.4 79 39-119 158-255 (320)
413 4gbj_A 6-phosphogluconate dehy 74.6 13 0.00046 27.4 7.3 85 24-116 7-95 (297)
414 1xa0_A Putative NADPH dependen 74.4 4.2 0.00014 30.3 4.6 91 19-119 146-247 (328)
415 3g79_A NDP-N-acetyl-D-galactos 74.3 31 0.0011 27.5 11.2 97 21-118 17-147 (478)
416 3tqh_A Quinone oxidoreductase; 74.2 8.8 0.0003 28.4 6.3 93 14-117 146-244 (321)
417 2i6t_A Ubiquitin-conjugating e 73.9 7.8 0.00027 28.8 5.9 93 21-118 13-125 (303)
418 2vvp_A Ribose-5-phosphate isom 73.7 2.2 7.7E-05 28.7 2.6 34 30-63 69-102 (162)
419 3nx4_A Putative oxidoreductase 73.6 5.4 0.00018 29.6 5.0 86 24-119 149-242 (324)
420 2o3j_A UDP-glucose 6-dehydroge 73.5 23 0.00079 28.1 8.9 94 23-116 10-133 (481)
421 3gqv_A Enoyl reductase; medium 73.2 28 0.00095 26.4 9.1 91 20-119 163-264 (371)
422 3abi_A Putative uncharacterize 72.9 16 0.00055 27.7 7.6 64 20-87 14-85 (365)
423 4g65_A TRK system potassium up 72.8 3.5 0.00012 32.7 3.9 62 22-85 3-74 (461)
424 1o1x_A Ribose-5-phosphate isom 72.8 2.2 7.6E-05 28.5 2.3 9 22-30 38-46 (155)
425 2vhw_A Alanine dehydrogenase; 72.3 0.51 1.8E-05 36.4 -1.0 95 21-118 167-268 (377)
426 3he8_A Ribose-5-phosphate isom 72.3 2.5 8.6E-05 28.0 2.5 34 30-63 65-98 (149)
427 2qrv_A DNA (cytosine-5)-methyl 71.7 3.8 0.00013 30.4 3.7 67 21-87 15-91 (295)
428 3s5p_A Ribose 5-phosphate isom 70.9 2.9 9.9E-05 28.2 2.6 13 93-105 133-145 (166)
429 3g0o_A 3-hydroxyisobutyrate de 70.4 12 0.00043 27.4 6.3 88 22-116 7-100 (303)
430 1vpt_A VP39; RNA CAP, poly(A) 70.1 27 0.00092 26.4 7.8 79 22-123 76-158 (348)
431 3evt_A Phosphoglycerate dehydr 69.9 2.1 7.3E-05 32.3 2.0 86 22-116 137-225 (324)
432 4e12_A Diketoreductase; oxidor 69.9 6.8 0.00023 28.6 4.7 88 22-115 4-118 (283)
433 3ph3_A Ribose-5-phosphate isom 69.8 2.8 9.6E-05 28.4 2.3 11 22-32 46-56 (169)
434 3dfz_A SIRC, precorrin-2 dehyd 69.8 8.6 0.00029 27.3 5.0 63 21-86 30-98 (223)
435 3krt_A Crotonyl COA reductase; 69.6 8.9 0.0003 30.1 5.6 90 19-118 226-344 (456)
436 4a0s_A Octenoyl-COA reductase/ 69.3 17 0.0006 28.2 7.2 90 19-118 218-336 (447)
437 2vn8_A Reticulon-4-interacting 69.0 12 0.00042 28.3 6.2 92 19-118 181-280 (375)
438 1np3_A Ketol-acid reductoisome 69.0 6.7 0.00023 29.6 4.6 85 22-116 16-105 (338)
439 2ppw_A Conserved domain protei 68.2 2.2 7.6E-05 30.1 1.6 9 23-31 34-42 (216)
440 4g2n_A D-isomer specific 2-hyd 68.1 3 0.0001 31.8 2.5 84 22-115 173-260 (345)
441 2cvz_A Dehydrogenase, 3-hydrox 67.7 17 0.0006 26.1 6.6 83 24-116 3-88 (289)
442 3ono_A Ribose/galactose isomer 67.6 2.5 8.6E-05 29.8 1.8 34 30-63 74-107 (214)
443 2vvr_A Ribose-5-phosphate isom 66.7 2.1 7.1E-05 28.5 1.2 9 22-30 27-35 (149)
444 2km1_A Protein DRE2; yeast, an 66.7 3 0.0001 27.2 1.9 19 98-116 78-96 (136)
445 3c5y_A Ribose/galactose isomer 66.6 2.7 9.4E-05 29.9 1.8 22 9-32 38-59 (231)
446 3k7p_A Ribose 5-phosphate isom 66.5 4 0.00014 27.9 2.6 25 39-63 98-122 (179)
447 3gg2_A Sugar dehydrogenase, UD 66.4 18 0.00061 28.5 6.7 92 23-117 3-121 (450)
448 3r6d_A NAD-dependent epimerase 66.3 16 0.00056 25.0 6.0 136 23-172 6-154 (221)
449 3pid_A UDP-glucose 6-dehydroge 66.3 23 0.00078 27.8 7.2 93 22-118 36-153 (432)
450 4dll_A 2-hydroxy-3-oxopropiona 66.2 37 0.0013 25.1 8.2 87 22-116 31-122 (320)
451 3gaz_A Alcohol dehydrogenase s 66.2 6.7 0.00023 29.5 4.1 93 14-119 144-247 (343)
452 3ic5_A Putative saccharopine d 66.1 19 0.00064 21.6 6.0 63 22-87 5-77 (118)
453 1bg6_A N-(1-D-carboxylethyl)-L 65.7 15 0.00053 27.4 6.1 88 23-117 5-108 (359)
454 2ew2_A 2-dehydropantoate 2-red 65.6 36 0.0012 24.7 8.6 87 23-117 4-107 (316)
455 1zcj_A Peroxisomal bifunctiona 65.6 48 0.0016 26.1 9.3 89 22-116 37-148 (463)
456 1ej6_A Lambda2; icosahedral, n 65.2 3.9 0.00013 35.9 2.8 100 19-120 819-927 (1289)
457 3zwc_A Peroxisomal bifunctiona 65.2 21 0.00073 30.1 7.2 94 22-118 316-429 (742)
458 4dgs_A Dehydrogenase; structur 64.9 21 0.0007 27.1 6.5 81 22-115 171-255 (340)
459 3hn7_A UDP-N-acetylmuramate-L- 64.8 53 0.0018 26.3 10.1 67 22-90 19-91 (524)
460 1wg8_A Predicted S-adenosylmet 64.7 3 0.0001 30.9 1.8 25 96-120 211-235 (285)
461 3n58_A Adenosylhomocysteinase; 64.5 21 0.00072 28.3 6.6 99 8-117 233-333 (464)
462 1tt7_A YHFP; alcohol dehydroge 63.8 6.2 0.00021 29.4 3.5 91 19-119 147-248 (330)
463 3sgw_A Ribose 5-phosphate isom 63.4 4.9 0.00017 27.6 2.6 8 24-31 59-66 (184)
464 3tka_A Ribosomal RNA small sub 62.8 3.2 0.00011 31.6 1.7 25 96-120 252-276 (347)
465 3pp8_A Glyoxylate/hydroxypyruv 62.6 6.5 0.00022 29.4 3.4 83 22-115 139-226 (315)
466 2hmt_A YUAA protein; RCK, KTN, 62.3 26 0.00088 21.9 9.8 87 22-116 6-102 (144)
467 3oj0_A Glutr, glutamyl-tRNA re 62.2 5.1 0.00017 25.8 2.5 83 22-116 21-108 (144)
468 3ado_A Lambda-crystallin; L-gu 62.2 5.7 0.0002 29.9 3.0 96 20-119 4-124 (319)
469 1pjc_A Protein (L-alanine dehy 62.1 3.5 0.00012 31.4 1.9 94 22-118 167-267 (361)
470 1wwk_A Phosphoglycerate dehydr 62.0 2.4 8.2E-05 31.6 0.9 86 21-116 141-230 (307)
471 4em8_A Ribose 5-phosphate isom 62.0 2.7 9.1E-05 27.9 1.0 57 10-68 23-89 (148)
472 2h78_A Hibadh, 3-hydroxyisobut 61.8 28 0.00097 25.3 6.8 86 23-116 4-95 (302)
473 1dxy_A D-2-hydroxyisocaproate 61.2 3.5 0.00012 31.1 1.7 85 21-117 144-232 (333)
474 2eez_A Alanine dehydrogenase; 60.4 4.2 0.00014 31.1 2.0 93 22-118 166-266 (369)
475 3ojo_A CAP5O; rossmann fold, c 60.3 26 0.00088 27.5 6.5 20 97-116 108-127 (431)
476 4g65_A TRK system potassium up 60.0 10 0.00034 30.0 4.2 96 9-111 221-327 (461)
477 2y0c_A BCEC, UDP-glucose dehyd 59.7 31 0.0011 27.4 7.0 93 22-116 8-126 (478)
478 3tri_A Pyrroline-5-carboxylate 59.7 20 0.0007 26.0 5.6 87 23-115 4-95 (280)
479 3e48_A Putative nucleoside-dip 59.6 45 0.0015 23.8 8.5 64 24-89 2-75 (289)
480 4e2x_A TCAB9; kijanose, tetron 59.1 44 0.0015 25.5 7.7 88 21-118 318-410 (416)
481 2q3e_A UDP-glucose 6-dehydroge 58.2 66 0.0023 25.3 8.8 39 22-60 5-46 (467)
482 3slg_A PBGP3 protein; structur 58.0 21 0.00072 26.7 5.7 65 22-87 24-99 (372)
483 3h2s_A Putative NADH-flavin re 58.0 41 0.0014 22.8 10.1 93 24-118 2-104 (224)
484 2g76_A 3-PGDH, D-3-phosphoglyc 57.5 5.7 0.00019 30.1 2.3 86 21-116 164-253 (335)
485 3c7a_A Octopine dehydrogenase; 57.3 49 0.0017 25.3 7.7 33 79-116 82-114 (404)
486 2pv7_A T-protein [includes: ch 56.8 40 0.0014 24.6 6.8 71 23-115 22-96 (298)
487 3jtm_A Formate dehydrogenase, 56.6 2.1 7.1E-05 32.7 -0.2 87 21-115 163-253 (351)
488 1zsy_A Mitochondrial 2-enoyl t 55.8 57 0.002 24.4 7.7 90 19-118 165-270 (357)
489 3slk_A Polyketide synthase ext 55.6 40 0.0014 28.7 7.4 89 19-118 343-442 (795)
490 2cdc_A Glucose dehydrogenase g 55.3 12 0.00041 28.3 3.9 88 22-119 181-279 (366)
491 1t2d_A LDH-P, L-lactate dehydr 54.9 38 0.0013 25.3 6.5 95 21-117 3-125 (322)
492 3ged_A Short-chain dehydrogena 54.8 36 0.0012 24.4 6.1 51 23-75 3-58 (247)
493 1mv8_A GMD, GDP-mannose 6-dehy 54.7 34 0.0012 26.6 6.4 35 24-60 2-39 (436)
494 3gvx_A Glycerate dehydrogenase 54.7 3.2 0.00011 30.8 0.5 83 22-116 122-207 (290)
495 4gwg_A 6-phosphogluconate dehy 54.6 80 0.0027 25.1 9.1 88 23-116 5-101 (484)
496 3h9u_A Adenosylhomocysteinase; 54.3 32 0.0011 27.1 6.1 98 8-116 197-296 (436)
497 3hdj_A Probable ornithine cycl 54.0 8.9 0.0003 28.6 2.9 101 13-123 113-218 (313)
498 1xdw_A NAD+-dependent (R)-2-hy 53.9 3.8 0.00013 30.9 0.8 84 22-116 146-232 (331)
499 4hy3_A Phosphoglycerate oxidor 53.5 7.3 0.00025 29.9 2.3 85 22-116 176-264 (365)
500 3dqp_A Oxidoreductase YLBE; al 52.8 44 0.0015 22.7 6.3 90 24-119 2-106 (219)
No 1
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=3.6e-32 Score=211.48 Aligned_cols=180 Identities=51% Similarity=1.014 Sum_probs=153.0
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccCCCCCEEE
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAIL 84 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~ 84 (184)
+......+++.++.+++..+|||||||+|.++..+++++|+.+++++|++.+++.+++.++++++.+|+++++|.+|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~ 264 (364)
T 3p9c_A 185 SIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTIL 264 (364)
T ss_dssp HHHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEE
T ss_pred hHHHHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEE
Confidence 34456677777765778899999999999999999999999999999999999999988999999999998777669999
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcC
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAG 164 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 164 (184)
+.+++|+|++++..++|++++++|||||+|++.|...++..............++.++....+++.++.++|.++|+++|
T Consensus 265 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AG 344 (364)
T 3p9c_A 265 MKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAG 344 (364)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTT
T ss_pred ehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCC
Confidence 99999999999888999999999999999999998876643322111222345555553345788899999999999999
Q ss_pred CceeEEEeecCceEEEEEeC
Q 030025 165 FSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 165 f~~i~~~~~~~~~~~~~~~~ 184 (184)
|+.+++.+..+..++++++|
T Consensus 345 F~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 345 FTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp CCEEEEEEEETTEEEEEEEC
T ss_pred CceEEEEEcCCceEEEEEeC
Confidence 99999999999999999997
No 2
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=5.9e-32 Score=210.57 Aligned_cols=180 Identities=54% Similarity=0.991 Sum_probs=152.3
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccCCCCCEEE
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAIL 84 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~ 84 (184)
+......+++.++.+++..+|||||||+|.++..+++++|+.+++++|++.+++.+++.++++++.+|+++++|.+|+|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~ 266 (368)
T 3reo_A 187 STITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIF 266 (368)
T ss_dssp HHHHHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEE
T ss_pred hhhHHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEE
Confidence 34445667777755778899999999999999999999999999999999999999988999999999998777669999
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcC
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAG 164 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 164 (184)
+.+++|+|++++..++|++++++|+|||+|++.|...++..............++.++....+++.++.++|.++|+++|
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AG 346 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASG 346 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTT
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCC
Confidence 99999999999888999999999999999999998876543332222223345555554344678899999999999999
Q ss_pred CceeEEEeecCceEEEEEeC
Q 030025 165 FSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 165 f~~i~~~~~~~~~~~~~~~~ 184 (184)
|+.+++.+..+..++++++|
T Consensus 347 F~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 347 FRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp CCEEEEEEEETTEEEEEEEC
T ss_pred CeeeEEEEeCCCcEEEEEEe
Confidence 99999999999999999987
No 3
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=6e-32 Score=209.43 Aligned_cols=177 Identities=27% Similarity=0.443 Sum_probs=152.1
Q ss_pred cccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC------CCceEEEcccCc-
Q 030025 3 NHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY------PGVKHVGGDMFQ- 75 (184)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~------~~i~~~~~d~~~- 75 (184)
..+....+.+++.++ +++..+|+|||||+|.++..+++++|+++++..|.|.+++.+++. ++++++.+|+++
T Consensus 162 ~~~~~~~~~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~ 240 (353)
T 4a6d_A 162 EVWSVNGRSVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD 240 (353)
T ss_dssp TTHHHHHHHHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS
T ss_pred HHHHHHHHHHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccC
Confidence 344556677888887 999999999999999999999999999999999998888877653 689999999997
Q ss_pred cCCCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHH
Q 030025 76 SVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHE 155 (184)
Q Consensus 76 ~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (184)
+.+.+|+|++.+++|+|++++..++|+++++.|+|||+++|.|...++....+ .....+++.++.. .+++.||.++
T Consensus 241 ~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~---~~~~~~dl~ml~~-~~g~ert~~e 316 (353)
T 4a6d_A 241 PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGP---LLTQLYSLNMLVQ-TEGQERTPTH 316 (353)
T ss_dssp CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCC---HHHHHHHHHHHHS-SSCCCCCHHH
T ss_pred CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCC---HHHHHHHHHHHHh-CCCcCCCHHH
Confidence 56666999999999999999999999999999999999999998876654332 2334556666654 4788999999
Q ss_pred HHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 156 FTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 156 ~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
|.++|++|||+.+++++.+..+++|.|+|
T Consensus 317 ~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 317 YHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp HHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred HHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 99999999999999999988999999988
No 4
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.97 E-value=4.7e-29 Score=194.49 Aligned_cols=178 Identities=51% Similarity=0.923 Sum_probs=145.0
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccCCCCCEEEe
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILI 85 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~ 85 (184)
....+.+++.++.+++..+|||||||+|.++..+++++|.++++++|++.+++.+++.++++++.+|+.++++..|+|++
T Consensus 194 ~~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~ 273 (372)
T 1fp1_D 194 ATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMIL 273 (372)
T ss_dssp HHHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEE
Confidence 34456777777547788999999999999999999999999999999989999999888999999999886665799999
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCC
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGF 165 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 165 (184)
.+++||+++++...+|++++++|+|||++++.|...+...............+..++. ..+++.++.++|.++|+++||
T Consensus 274 ~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~t~~e~~~ll~~aGf 352 (372)
T 1fp1_D 274 KAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGF 352 (372)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHH-HHSCCCEEHHHHHHHHHHTTC
T ss_pred ecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHh-ccCCccCCHHHHHHHHHHCCC
Confidence 9999999998888999999999999999999998876543221101012233443332 224677899999999999999
Q ss_pred ceeEEEeecCc-eEEEEEeC
Q 030025 166 SGIRFVCFFHN-LWVMEFYK 184 (184)
Q Consensus 166 ~~i~~~~~~~~-~~~~~~~~ 184 (184)
+.++++....+ .++|+++|
T Consensus 353 ~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 353 SKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp SEEEEEEEETTTEEEEEEEC
T ss_pred ceEEEEEcCCCCeEEEEEeC
Confidence 99999985444 69999987
No 5
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.96 E-value=2.3e-28 Score=189.09 Aligned_cols=174 Identities=28% Similarity=0.446 Sum_probs=143.0
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-----CCceEEEcccCccCCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-----PGVKHVGGDMFQSVPN 79 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-----~~i~~~~~d~~~~~~~ 79 (184)
+....+.+++.++ +++..+|||||||+|.++..+++++|+.+++++|++.++..++.. ++++++.+|+.+++|.
T Consensus 169 ~~~~~~~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~ 247 (348)
T 3lst_A 169 SAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPH 247 (348)
T ss_dssp HHTTHHHHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCC
T ss_pred hhhhHHHHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCC
Confidence 3344667888888 999999999999999999999999999999999996666533221 5799999999876664
Q ss_pred CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 80 GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 80 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
.|+|++.+++||+++++...+|++++++|||||+|++.|...++.... ......+..++.. .+++.++.++|.++
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~----~~~~~~d~~~~~~-~~~~~~t~~e~~~l 322 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDA----HQSKEMDFMMLAA-RTGQERTAAELEPL 322 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSC----CHHHHHHHHHHHT-TSCCCCBHHHHHHH
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc----chhhhcChhhhhc-CCCcCCCHHHHHHH
Confidence 599999999999999988899999999999999999999877654221 1223444444433 46778899999999
Q ss_pred HHHcCCceeEEEeecCceEEEEEeC
Q 030025 160 ATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 160 l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
|+++||+.+++++..+..++++++|
T Consensus 323 l~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 323 FTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred HHHCCCceEEEEECCCCcEEEEEEe
Confidence 9999999999999778889999875
No 6
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.96 E-value=2.2e-28 Score=189.38 Aligned_cols=169 Identities=37% Similarity=0.701 Sum_probs=140.2
Q ss_pred HHHh--cCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhh
Q 030025 13 LEAY--KGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILH 90 (184)
Q Consensus 13 ~~~~--~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~ 90 (184)
++.+ . +++..+|||||||+|.++..+++++|+.+++++|++.+++.+++.++++++.+|+.+++|..|+|++.+++|
T Consensus 179 ~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh 257 (352)
T 1fp2_A 179 LRDCDFV-FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILH 257 (352)
T ss_dssp HHTCHHH-HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGG
T ss_pred HHhcccc-cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhc
Confidence 5566 4 677899999999999999999999999999999998999999988889999999987766679999999999
Q ss_pred cCChHHHHHHHHHHHhhCCC---CcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCce
Q 030025 91 DWSDEHCLKLLKNCHKSIPE---GGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSG 167 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 167 (184)
|+++++...+|++++++||| ||++++.|...++....+.........+..++. . +++.++.++|.++++++||+.
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~~~t~~e~~~ll~~aGf~~ 335 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERNEEEWKKLFIEAGFQH 335 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEEHHHHHHHHHHTTCCE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCCCCCHHHHHHHHHHCCCCe
Confidence 99998888999999999999 999999998876542211001112233443333 2 366789999999999999999
Q ss_pred eEEEeecCceEEEEEeC
Q 030025 168 IRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 168 i~~~~~~~~~~~~~~~~ 184 (184)
++++...+..++|+++|
T Consensus 336 ~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 336 YKISPLTGFLSLIEIYP 352 (352)
T ss_dssp EEEEEEETTEEEEEEEC
T ss_pred eEEEecCCCcEEEEEeC
Confidence 99999878889999986
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.96 E-value=1.8e-28 Score=190.28 Aligned_cols=173 Identities=38% Similarity=0.666 Sum_probs=143.3
Q ss_pred HHHHHhc-CCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccCCCCCEEEechhh
Q 030025 11 KILEAYK-GFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWIL 89 (184)
Q Consensus 11 ~l~~~~~-~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l 89 (184)
.+++.++ ++++..+|||||||+|.++..+++++|+.+++++|++.+++.+++.++++++.+|+.++++.+|+|++.+++
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vl 261 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVL 261 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCG
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccc
Confidence 5677762 266789999999999999999999999999999999999999988888999999998876667999999999
Q ss_pred hcCChHHHHHHHHHHHhhCCC---CcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCc
Q 030025 90 HDWSDEHCLKLLKNCHKSIPE---GGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFS 166 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 166 (184)
|++++++...+|++++++|+| ||++++.|...++....+.........++.++. ..+++.++.++|.++|+++||+
T Consensus 262 h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~g~~~t~~e~~~ll~~aGf~ 340 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT-MFLGKERTKQEWEKLIYDAGFS 340 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH-HHSCCCEEHHHHHHHHHHTTCC
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc-cCCCCCCCHHHHHHHHHHcCCC
Confidence 999998888999999999999 999999998876543211001122334444433 2357788999999999999999
Q ss_pred eeEEEeecCceEEEEEeC
Q 030025 167 GIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 167 ~i~~~~~~~~~~~~~~~~ 184 (184)
.++++...+..++|+++|
T Consensus 341 ~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 341 SYKITPISGFKSLIEVYP 358 (358)
T ss_dssp EEEEEEETTTEEEEEEEC
T ss_pred eeEEEecCCCcEEEEEeC
Confidence 999999878889999986
No 8
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.96 E-value=2.6e-28 Score=190.13 Aligned_cols=173 Identities=25% Similarity=0.544 Sum_probs=145.7
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~~~ 77 (184)
+......+++.++ +++..+|||||||+|.++..+++++|+.+++++|++.+++.++++ ++++++.+|+.+++
T Consensus 187 ~~~~~~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 265 (369)
T 3gwz_A 187 SLTEAGQVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETI 265 (369)
T ss_dssp HHHHHHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCC
T ss_pred HhhhHHHHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCC
Confidence 3445677888887 889999999999999999999999999999999998888887652 67999999999866
Q ss_pred CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH
Q 030025 78 PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF 156 (184)
Q Consensus 78 ~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (184)
|.. |+|++.+++|++++++..++|+++++.|+|||+|++.|...++.... . ....++.++.. .+++.++.++|
T Consensus 266 p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~----~-~~~~d~~~~~~-~~g~~~t~~e~ 339 (369)
T 3gwz_A 266 PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAA----S-TLFVDLLLLVL-VGGAERSESEF 339 (369)
T ss_dssp CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCH----H-HHHHHHHHHHH-HSCCCBCHHHH
T ss_pred CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC----c-hhHhhHHHHhh-cCCccCCHHHH
Confidence 644 99999999999999988899999999999999999999887664221 1 23444444433 36778999999
Q ss_pred HHHHHHcCCceeEEEe-ecCceEEEEEeC
Q 030025 157 TTLATEAGFSGIRFVC-FFHNLWVMEFYK 184 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~-~~~~~~~~~~~~ 184 (184)
.++|+++||+.+++++ ..+..++++++|
T Consensus 340 ~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 340 AALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 9999999999999998 578889999876
No 9
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.96 E-value=1.1e-28 Score=189.61 Aligned_cols=166 Identities=26% Similarity=0.434 Sum_probs=137.9
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCccCCC-C
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQSVPN-G 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~~~~~-~ 80 (184)
.+.+++.++ +++..+|||||||+|.++..+++++|+.+++++|++.+++.++++ ++++++.+|+.+++|. .
T Consensus 158 ~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~ 236 (332)
T 3i53_A 158 YTGIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGA 236 (332)
T ss_dssp HTTGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSC
T ss_pred HHHHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCC
Confidence 445555665 777899999999999999999999999999999998888887653 6799999999876664 4
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHH
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLA 160 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (184)
|+|++.+++|++++++..++++++++.|+|||+|++.|...++. .+ ....+..++.. .+++.++.++|.++|
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~-----~~~~d~~~~~~-~~~~~~t~~e~~~ll 308 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HA-----GTGMDLRMLTY-FGGKERSLAELGELA 308 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----C-----CHHHHHHHHHH-HSCCCCCHHHHHHHH
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--Cc-----cHHHHHHHHhh-CCCCCCCHHHHHHHH
Confidence 99999999999999888899999999999999999999877654 11 12444444433 367788999999999
Q ss_pred HHcCCceeEEEeecCceEEEEEeC
Q 030025 161 TEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 161 ~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
+++||+.+++++..+ .++++++|
T Consensus 309 ~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 309 AQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHTTEEEEEEEECSS-SEEEEEEE
T ss_pred HHCCCEEEEEEECCC-cEEEEEee
Confidence 999999999998877 99999874
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.95 E-value=2.1e-27 Score=182.68 Aligned_cols=173 Identities=29% Similarity=0.474 Sum_probs=143.5
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~~~ 77 (184)
+....+.+++.++ +++ .+|||||||+|..+..+++++|..+++++|++.+++.+++. ++++++.+|+.+++
T Consensus 153 ~~~~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 230 (334)
T 2ip2_A 153 SNLAFHEIPRLLD-FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEV 230 (334)
T ss_dssp GHHHHHHHHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCC
T ss_pred HHHHHHHHHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCC
Confidence 4456678888887 888 99999999999999999999999999999998788877653 57999999998866
Q ss_pred CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH
Q 030025 78 PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF 156 (184)
Q Consensus 78 ~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (184)
+.. |+|++.+++|++++++...+++++++.|+|||++++.|...++... .......+..++... +++.++.++|
T Consensus 231 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~t~~e~ 305 (334)
T 2ip2_A 231 PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP----SPMSVLWDVHLFMAC-AGRHRTTEEV 305 (334)
T ss_dssp CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC----CHHHHHHHHHHHHHH-SCCCCBHHHH
T ss_pred CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC----cchhHHhhhHhHhhC-CCcCCCHHHH
Confidence 654 9999999999999988889999999999999999999987765322 122233444443322 4677899999
Q ss_pred HHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 157 TTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
.++++++||+.+++++.++..++|+++|
T Consensus 306 ~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 306 VDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 9999999999999998888889999876
No 11
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.95 E-value=1.5e-27 Score=177.49 Aligned_cols=161 Identities=18% Similarity=0.201 Sum_probs=124.0
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCCCEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNGDAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~D~i~~~~ 87 (184)
++++.+|||||||+|..+..+++++ ++++++|+|+ +.|++.|+++ .+++++++|+.+ ++++.|+|++.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 4788999999999999999999885 6789999999 9999988763 479999999998 666669999999
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhh--C---------------CCccc
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQ--Y---------------PGGKE 150 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~ 150 (184)
++||+++++...+|++++++|||||+|++.|.......... ....+.+.... . .....
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~-----~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~ 222 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVG-----ELLFNMHHDFKRANGYSELEISQKRSMLENVMLT 222 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHH-----HHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCC
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHH-----HHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccC
Confidence 99999988888899999999999999999998765431100 00001000000 0 00123
Q ss_pred cCHHHHHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 151 RTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
++.+++.++|++|||+.++++....++..+.|.|
T Consensus 223 ~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 223 DSVETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp BCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 5889999999999999999887665666566665
No 12
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.95 E-value=1.7e-26 Score=179.19 Aligned_cols=170 Identities=20% Similarity=0.420 Sum_probs=138.4
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~ 78 (184)
...+.+++.++ +++..+|||||||+|.++..+++++|+.+++++|++.+++.++++ ++++++.+|+.+ +++
T Consensus 177 ~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 177 FAIQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC
T ss_pred hhHHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC
Confidence 56678888888 888999999999999999999999999999999998888877642 459999999998 566
Q ss_pred CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc----cCHH
Q 030025 79 NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE----RTKH 154 (184)
Q Consensus 79 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 154 (184)
+.|+|++.+++|++++++...+++++++.|+|||++++.|...++. ..+. ...... ++....+++. ++.+
T Consensus 256 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~---~~~~~~--~~~~~~~g~~~~~~~t~~ 329 (359)
T 1x19_A 256 EADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP-ENPN---FDYLSH--YILGAGMPFSVLGFKEQA 329 (359)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT-TSCC---HHHHHH--HGGGGGSSCCCCCCCCGG
T ss_pred CCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC-CCch---HHHHHH--HHHhcCCCCcccCCCCHH
Confidence 5699999999999998888899999999999999999999887654 2111 111111 1111112333 8999
Q ss_pred HHHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 155 EFTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
+|.++++++||+.+++.... ..++++++|
T Consensus 330 e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 330 RYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp GHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 99999999999999998876 788898876
No 13
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.94 E-value=2e-26 Score=177.08 Aligned_cols=178 Identities=19% Similarity=0.230 Sum_probs=144.2
Q ss_pred CcccHHhHHHHHHHhcCC--CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcc
Q 030025 2 YNHTTLVLQKILEAYKGF--EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGD 72 (184)
Q Consensus 2 ~~~~~~~~~~l~~~~~~~--~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d 72 (184)
..........+++.++ + .+..+|||+|||+|.++..+++.+|..+++++|++.+++.+++. ++++++.+|
T Consensus 145 ~~~~~~~~~~~~~~~~-~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d 223 (335)
T 2r3s_A 145 SPMMANPAQLIAQLVN-ENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGS 223 (335)
T ss_dssp GGGGHHHHHHHHHHHT-C--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESC
T ss_pred HHHHhhhHHHHHHhcc-cccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecc
Confidence 3445556678888887 7 88899999999999999999999999999999998888877653 469999999
Q ss_pred cCc-cCCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc
Q 030025 73 MFQ-SVPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE 150 (184)
Q Consensus 73 ~~~-~~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (184)
+.+ +++.. |+|++.+++||+++++...+++++++.|+|||++++.+...++....+ ......+..++....++..
T Consensus 224 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 300 (335)
T 2r3s_A 224 AFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDA 300 (335)
T ss_dssp TTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCC
T ss_pred cccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCc
Confidence 987 66665 999999999999988888999999999999999999998776532221 1223344444443336778
Q ss_pred cCHHHHHHHHHHcCCceeEEEeecCceEEEEEe
Q 030025 151 RTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFY 183 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~ 183 (184)
++.++|.++++++||+.++++...+..+++.++
T Consensus 301 ~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 301 YTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred CCHHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 899999999999999999999887766766653
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.94 E-value=1.8e-26 Score=178.57 Aligned_cols=168 Identities=11% Similarity=0.212 Sum_probs=137.8
Q ss_pred HHHHHhcCCCC-CCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-c--CCC
Q 030025 11 KILEAYKGFEH-IKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-S--VPN 79 (184)
Q Consensus 11 ~l~~~~~~~~~-~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~--~~~ 79 (184)
.+++.++ +.+ ..+|||||||+|.++..+++++|..+++++|++.+++.++++ ++++++.+|+.+ + .+.
T Consensus 169 ~~l~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELG-VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCG-GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCC-CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 6777877 777 899999999999999999999999999999997788777653 469999999998 4 555
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHH
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTT 158 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (184)
. |+|++.+++||+++++...+++++++.|+|||++++.|...++....+ ......++.++....+++.++.++|.+
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~e~~~ 324 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTP---ALSADFSLHMMVNTNHGELHPTPWIAG 324 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSS---HHHHHHHHHHHHHSTTCCCCCHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCC---chHHHhhHHHHhhCCCCCcCCHHHHHH
Confidence 4 999999999999998888999999999999999999998876653222 223345555554445677899999999
Q ss_pred HHHHcCCceeEEEeecCceEEEEEeC
Q 030025 159 LATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 159 ~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
+|+++||+.++.. .+..+++.+.|
T Consensus 325 ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 325 VVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp HHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred HHHHCCCceeeec--cCceEEEEEec
Confidence 9999999999843 35677777765
No 15
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.94 E-value=9.6e-27 Score=180.93 Aligned_cols=171 Identities=18% Similarity=0.231 Sum_probs=132.1
Q ss_pred HHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCcc---CCCC-
Q 030025 12 ILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQS---VPNG- 80 (184)
Q Consensus 12 l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~~---~~~~- 80 (184)
++..+. ..+..+|||||||+|.++..+++++|+.+++++|++.+++.++++ ++++++.+|+.++ +|..
T Consensus 171 ~l~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~ 249 (363)
T 3dp7_A 171 ALEIVF-SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGF 249 (363)
T ss_dssp HHHHHG-GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCC
T ss_pred HHHHhc-ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCc
Confidence 444444 356789999999999999999999999999999998888877653 4799999999983 6644
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHh-hhhCCCccccCHHHHHHH
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLV-MTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++.+++|+|++++...+|+++++.|||||+|++.|...+....... ........... +....+++.++.++|.++
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~e~~~l 328 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETA-SYCLTQISLYFTAMANGNSKMFHSDDLIRC 328 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHH-HHHHHHHHHHHHHSSCSSCCSCCHHHHHHH
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccch-hhHHHHhhhhHHhhhCCCCcccCHHHHHHH
Confidence 9999999999999998889999999999999999999987765321100 00000111111 111234667899999999
Q ss_pred HHHcCCceeEEEeec-CceEEEEEeC
Q 030025 160 ATEAGFSGIRFVCFF-HNLWVMEFYK 184 (184)
Q Consensus 160 l~~aGf~~i~~~~~~-~~~~~~~~~~ 184 (184)
|+++||+.+++++.. ...++++++|
T Consensus 329 l~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 329 IENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp HHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred HHHcCCeEEEEEeCCCCCceEEEEee
Confidence 999999999998654 4588888765
No 16
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.94 E-value=1.9e-26 Score=179.76 Aligned_cols=174 Identities=28% Similarity=0.513 Sum_probs=138.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~~~ 77 (184)
+....+.+++.++ +++..+|||||||+|.++..+++.+|..+++++|++.+++.++++ ++++++.+|+.+++
T Consensus 167 ~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 245 (374)
T 1qzz_A 167 EDLAYEAPADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPL 245 (374)
T ss_dssp STTTTHHHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred hHhHHHHHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcC
Confidence 3445577888887 888899999999999999999999999999999997788877653 37999999998766
Q ss_pred CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee--ecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 78 PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES--VLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 78 ~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
+.. |+|++.+++||+++++...+++++++.|+|||++++.+. ..++.. ........+..++.. .++..++.+
T Consensus 246 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~ 320 (374)
T 1qzz_A 246 PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGA----DRFFSTLLDLRMLTF-MGGRVRTRD 320 (374)
T ss_dssp SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-----------HHHHHHHHHHHHHH-HSCCCCCHH
T ss_pred CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCC----CcchhhhcchHHHHh-CCCcCCCHH
Confidence 665 999999999999988877999999999999999999998 554321 111122333333322 256778999
Q ss_pred HHHHHHHHcCCceeEEEeecCce-----EEEEEeC
Q 030025 155 EFTTLATEAGFSGIRFVCFFHNL-----WVMEFYK 184 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~~~~~~~-----~~~~~~~ 184 (184)
+|.++|+++||+.++++...+.. ++++++|
T Consensus 321 ~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 321 EVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred HHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 99999999999999999887766 8888864
No 17
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.94 E-value=1.7e-26 Score=179.20 Aligned_cols=174 Identities=24% Similarity=0.481 Sum_probs=140.1
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~~~ 77 (184)
+....+.+++.++ +++..+|||||||+|.++..+++.+|.++++++|++.+++.++++ ++++++.+|+.+++
T Consensus 168 ~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 246 (360)
T 1tw3_A 168 QDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPL 246 (360)
T ss_dssp TTTTTHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHhHHHHHHhCC-CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCC
Confidence 3344567788887 888899999999999999999999999999999987788777653 37999999998866
Q ss_pred CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee-cCCCCCCCccccchhhhhhHhhhhCCCccccCHHH
Q 030025 78 PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV-LPELPENGTHSKINSLADVLVMTQYPGGKERTKHE 155 (184)
Q Consensus 78 ~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (184)
+.. |+|++.+++|++++++...+++++++.|+|||++++.+.. .++... .......+..++.. .++..++.++
T Consensus 247 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~t~~e 321 (360)
T 1tw3_A 247 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSF----NEQFTELDLRMLVF-LGGALRTREK 321 (360)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCC----SHHHHHHHHHHHHH-HSCCCCBHHH
T ss_pred CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCC----cchhhhccHHHhhh-cCCcCCCHHH
Confidence 665 9999999999999888789999999999999999999987 543211 11112333333322 2567789999
Q ss_pred HHHHHHHcCCceeEEEeecCc-----eEEEEEeC
Q 030025 156 FTTLATEAGFSGIRFVCFFHN-----LWVMEFYK 184 (184)
Q Consensus 156 ~~~~l~~aGf~~i~~~~~~~~-----~~~~~~~~ 184 (184)
|.++|+++||+.++++...+. .++++++|
T Consensus 322 ~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 322 WDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred HHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 999999999999999887665 78898875
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.93 E-value=1.6e-24 Score=158.59 Aligned_cols=174 Identities=17% Similarity=0.152 Sum_probs=130.2
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCCCC-C
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVPNG-D 81 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~~~-D 81 (184)
.+.++..+....+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.++++ +++.++.+|+.+ +.+.. |
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD 111 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYD 111 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEE
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCce
Confidence 455566655345678999999999999999999999999999999 8888877653 489999999988 55544 9
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhh------------hhHh-hhhCCCc
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLA------------DVLV-MTQYPGG 148 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~ 148 (184)
+|++..++||+++++...++++++++|||||++++.+...+...... ......+ .... .......
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIE--NLNKTIWRQYVENSGLTEEEIAAGYERSKLD 189 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHH--HHHHHHHHHHHHTSSCCHHHHHTTC----CC
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhh--hHHHHHHHHHHHhcCCCHHHHHHHHHhcccc
Confidence 99999999999988777899999999999999999998765431000 0000000 0000 0001123
Q ss_pred cccCHHHHHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 149 KERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 149 ~~~~~~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
..++.+++.++|++|||+.++++.....+.++..+|
T Consensus 190 ~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 190 KDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp CCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred cccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 456899999999999999999998877777766554
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.91 E-value=1.3e-23 Score=152.24 Aligned_cols=156 Identities=17% Similarity=0.203 Sum_probs=128.7
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cCCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SVPN 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~~~ 79 (184)
...+++.+. ..+..+|||+|||+|.++..+++.. |..+++++|. +.+++.+++. +++.+..+|+.+ +++.
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 567888887 8889999999999999999999996 7789999999 8898888764 579999999987 5554
Q ss_pred C--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHH
Q 030025 80 G--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFT 157 (184)
Q Consensus 80 ~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (184)
. |+|++..++||+++. ..+++++.++|+|||++++.+.......... .....++.+++.
T Consensus 105 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 165 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEP--LKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----------------PPEEVYSEWEVG 165 (219)
T ss_dssp SCEEEEEEESCGGGCSSH--HHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----------------CGGGSCCHHHHH
T ss_pred CCeeEEEeehhhhhcCCH--HHHHHHHHHHhCCCeEEEEEEecccccccCC-----------------chhcccCHHHHH
Confidence 3 999999999999765 4789999999999999999987655431111 112346899999
Q ss_pred HHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 158 TLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 158 ~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
++++++||+.++.....+....+.+.|
T Consensus 166 ~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 166 LILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 999999999999988877777666654
No 20
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.91 E-value=5.5e-25 Score=159.03 Aligned_cols=172 Identities=13% Similarity=0.233 Sum_probs=126.0
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S 76 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~ 76 (184)
..+...+++.++ .++. +|||+|||+|.++..+++. +..+++++|+ +.+++.++++ +++.++.+|+.+ +
T Consensus 30 ~~~~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 106 (219)
T 3dlc_A 30 PIIAENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP 106 (219)
T ss_dssp HHHHHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS
T ss_pred HHHHHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC
Confidence 445677777877 5555 9999999999999999998 7789999999 8898888764 479999999988 6
Q ss_pred CCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhh-hhhHhhhhCCCccccCH
Q 030025 77 VPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSL-ADVLVMTQYPGGKERTK 153 (184)
Q Consensus 77 ~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 153 (184)
++.. |+|++..++||+++.. .++++++++|+|||++++.+.................. ....... ......++.
T Consensus 107 ~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 183 (219)
T 3dlc_A 107 IEDNYADLIVSRGSVFFWEDVA--TAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFN-RKNISQENV 183 (219)
T ss_dssp SCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHH-HHHSSHHHH
T ss_pred CCcccccEEEECchHhhccCHH--HHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhh-hhccccCCH
Confidence 6543 9999999999997654 79999999999999999987544321000000000000 0000000 001234588
Q ss_pred HHHHHHHHHcCCceeEEEeecCceEEEEEe
Q 030025 154 HEFTTLATEAGFSGIRFVCFFHNLWVMEFY 183 (184)
Q Consensus 154 ~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~ 183 (184)
+++.++|+++||+.+++.......|++..+
T Consensus 184 ~~~~~~l~~aGf~~v~~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 184 ERFQNVLDEIGISSYEIILGDEGFWIIISK 213 (219)
T ss_dssp HHHHHHHHHHTCSSEEEEEETTEEEEEEBC
T ss_pred HHHHHHHHHcCCCeEEEEecCCceEEEEec
Confidence 999999999999999999888888876544
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.91 E-value=1.6e-23 Score=151.74 Aligned_cols=166 Identities=16% Similarity=0.239 Sum_probs=124.7
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--CCceEEEcccCc-cCCCC-CEE
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQ-SVPNG-DAI 83 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~-~~~~~-D~i 83 (184)
...+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++. .++.++.+|+.+ +.+.. |+|
T Consensus 34 ~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 34 YEDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 356777776 667889999999999999999987 579999999 8898888765 389999999988 55544 999
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhh-------hhCCCccccCHHHH
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVM-------TQYPGGKERTKHEF 156 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 156 (184)
++..++||+++++...++++++++|||||.+++.++........ ......... ........++.+++
T Consensus 111 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (220)
T 3hnr_A 111 VSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAY------DKTVEAAKQRGFHQLANDLQTEYYTRIPVM 184 (220)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHH------HHHHHHHHHTTCHHHHHHHHHSCCCBHHHH
T ss_pred EECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHH------HHHHHHHHhCCCccchhhcchhhcCCHHHH
Confidence 99999999998876679999999999999999998765442100 000000000 00001124488999
Q ss_pred HHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 157 TTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
.++++++||+++.... .+..|++.+.|
T Consensus 185 ~~~l~~aGf~v~~~~~-~~~~w~~~~~~ 211 (220)
T 3hnr_A 185 QTIFENNGFHVTFTRL-NHFVWVMEATK 211 (220)
T ss_dssp HHHHHHTTEEEEEEEC-SSSEEEEEEEE
T ss_pred HHHHHHCCCEEEEeec-cceEEEEeehh
Confidence 9999999998665554 47888887654
No 22
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.91 E-value=1.6e-23 Score=155.72 Aligned_cols=159 Identities=18% Similarity=0.246 Sum_probs=125.9
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCCC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVPN 79 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~~ 79 (184)
......+++.++ ..+..+|||||||+|.++..+++.+ ..+++++|+ +.+++.++++ ++++++.+|+.+ +++.
T Consensus 41 ~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 41 LEATKKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCT
T ss_pred HHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCC
Confidence 455677788887 8888999999999999999999987 679999999 8888887765 689999999988 6654
Q ss_pred C--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHH
Q 030025 80 G--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFT 157 (184)
Q Consensus 80 ~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (184)
. |+|++..++||+++++...++++++++|||||++++.++..+.... .......... ..+...++.+++.
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~ 190 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKEN-----WDDEFKEYVK---QRKYTLITVEEYA 190 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGG-----CCHHHHHHHH---HHTCCCCCHHHHH
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCccc-----chHHHHHHHh---cCCCCCCCHHHHH
Confidence 3 9999999999997777789999999999999999999987654111 0011111111 1123467999999
Q ss_pred HHHHHcCCceeEEEeec
Q 030025 158 TLATEAGFSGIRFVCFF 174 (184)
Q Consensus 158 ~~l~~aGf~~i~~~~~~ 174 (184)
++++++||+.+++....
T Consensus 191 ~~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 191 DILTACNFKNVVSKDLS 207 (266)
T ss_dssp HHHHHTTCEEEEEEECH
T ss_pred HHHHHcCCeEEEEEeCC
Confidence 99999999999887653
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.90 E-value=7.4e-23 Score=151.99 Aligned_cols=157 Identities=18% Similarity=0.354 Sum_probs=121.0
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SV 77 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~ 77 (184)
......+++.++ ..+..+|||||||+|.++..+++..+ +++++|+ +.|++.++++ +++.++.+|+.+ ++
T Consensus 23 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~ 99 (260)
T 1vl5_A 23 GSDLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF 99 (260)
T ss_dssp CCCHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS
T ss_pred HHHHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCC
Confidence 344677888887 78889999999999999999999864 9999999 8899888653 579999999988 66
Q ss_pred CCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHh-hhhCCCccccCHH
Q 030025 78 PNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLV-MTQYPGGKERTKH 154 (184)
Q Consensus 78 ~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (184)
+.. |+|++..++||++++. .+|++++++|||||++++.+...+... .......... .........++..
T Consensus 100 ~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 171 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHHFPNPA--SFVSEAYRVLKKGGQLLLVDNSAPEND------AFDVFYNYVEKERDYSHHRAWKKS 171 (260)
T ss_dssp CTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEEEBCSSH------HHHHHHHHHHHHHCTTCCCCCBHH
T ss_pred CCCCEEEEEEhhhhHhcCCHH--HHHHHHHHHcCCCCEEEEEEcCCCCCH------HHHHHHHHHHHhcCccccCCCCHH
Confidence 643 9999999999998765 789999999999999999987665421 1111111111 1111124567899
Q ss_pred HHHHHHHHcCCceeEEEee
Q 030025 155 EFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~~~ 173 (184)
+|.++|+++||+.+++...
T Consensus 172 ~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 172 DWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEEe
Confidence 9999999999998876654
No 24
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.90 E-value=1.5e-22 Score=148.79 Aligned_cols=153 Identities=18% Similarity=0.303 Sum_probs=118.5
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---cCCCC--
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---SVPNG-- 80 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~~~~~-- 80 (184)
.+...+...++.+++..+|||||||+|.++..+++. +.+++++|+ +.+++.++++ +.++..|+.+ +++..
T Consensus 27 ~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~f 102 (240)
T 3dli_A 27 LVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYL 102 (240)
T ss_dssp HHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCB
T ss_pred HHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCe
Confidence 445556666664667799999999999999999987 568999999 8999988866 8999999876 44443
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHH
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLA 160 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (184)
|+|++..++||+++++...++++++++|||||++++..+..... ...... .........++.+++.+++
T Consensus 103 D~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~l~~~l 171 (240)
T 3dli_A 103 DGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---------YSLINF--YIDPTHKKPVHPETLKFIL 171 (240)
T ss_dssp SEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---------HHHHHH--TTSTTCCSCCCHHHHHHHH
T ss_pred eEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---------HHHHHH--hcCccccccCCHHHHHHHH
Confidence 99999999999998766789999999999999999987653221 001111 1111234567999999999
Q ss_pred HHcCCceeEEEeec
Q 030025 161 TEAGFSGIRFVCFF 174 (184)
Q Consensus 161 ~~aGf~~i~~~~~~ 174 (184)
+++||+.+++....
T Consensus 172 ~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 172 EYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHTCEEEEEEEEC
T ss_pred HHCCCeEEEEEEec
Confidence 99999998877653
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.89 E-value=1.7e-22 Score=145.93 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=116.2
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--CCceEEEcccCccCCC-C-CEE
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQSVPN-G-DAI 83 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~~~~~-~-D~i 83 (184)
...+++.+..+++..+|||||||+|.++..+++. ..+++++|+ +.+++.+++. +++.++.+|+.+..+. . |+|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v 111 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAV 111 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEE
Confidence 4556666664667789999999999999999998 569999999 8899888764 6799999999875333 3 999
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcc-----ccchhhhhhHhhhhCCCccccCHHHHHH
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTH-----SKINSLADVLVMTQYPGGKERTKHEFTT 158 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (184)
++..++||+++++...++++++++|+|||.+++.+...+........ ............. ......++.+++.+
T Consensus 112 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 190 (218)
T 3ou2_A 112 FFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSF-RIVKVFRSPAELTE 190 (218)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEE-EEECCCCCHHHHHH
T ss_pred EEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchh-hHhhcCCCHHHHHH
Confidence 99999999998877799999999999999999998876432111000 0000000000000 00012459999999
Q ss_pred HHHHcCCceeEEEee
Q 030025 159 LATEAGFSGIRFVCF 173 (184)
Q Consensus 159 ~l~~aGf~~i~~~~~ 173 (184)
+++++||++......
T Consensus 191 ~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 191 RLTALGWSCSVDEVH 205 (218)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHCCCEEEeeecc
Confidence 999999995444433
No 26
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.89 E-value=4.7e-22 Score=147.91 Aligned_cols=155 Identities=12% Similarity=0.147 Sum_probs=121.0
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCC--
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNG-- 80 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~-- 80 (184)
...+.+.+++.++ ..+..+|||||||+|.++..+++ +..+++++|+ +.+++.+++.++++++.+|+.+ +++..
T Consensus 19 ~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~f 95 (261)
T 3ege_A 19 DIRIVNAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSV 95 (261)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCB
T ss_pred cHHHHHHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCE
Confidence 3467888888888 78899999999999999999998 5789999999 9999999998899999999988 65543
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccc-hhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKI-NSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++..++||+++.. .++++++++|| ||++++.+...+..... +. .......... ....++.+++. +
T Consensus 96 D~v~~~~~l~~~~~~~--~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~-~ 164 (261)
T 3ege_A 96 DGVISILAIHHFSHLE--KSFQEMQRIIR-DGTIVLLTFDIRLAQRI----WLYDYFPFLWEDA---LRFLPLDEQIN-L 164 (261)
T ss_dssp SEEEEESCGGGCSSHH--HHHHHHHHHBC-SSCEEEEEECGGGCCCC----GGGGTCHHHHHHH---HTSCCHHHHHH-H
T ss_pred eEEEEcchHhhccCHH--HHHHHHHHHhC-CcEEEEEEcCCchhHHH----HHHHHHHHHhhhh---hhhCCCHHHHH-H
Confidence 9999999999997664 78999999999 99999988765332211 11 0111111111 12345678888 9
Q ss_pred HHHcCCceeEEEee
Q 030025 160 ATEAGFSGIRFVCF 173 (184)
Q Consensus 160 l~~aGf~~i~~~~~ 173 (184)
++++||+.+++...
T Consensus 165 l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 165 LQENTKRRVEAIPF 178 (261)
T ss_dssp HHHHHCSEEEEEEC
T ss_pred HHHcCCCceeEEEe
Confidence 99999999887654
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.89 E-value=3.3e-22 Score=150.50 Aligned_cols=165 Identities=16% Similarity=0.208 Sum_probs=122.9
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP 78 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~ 78 (184)
...+.+++.++ +.+..+|||||||+|.++..+++.++ .+++++|+ +.+++.++++ +++.++.+|+.+..+
T Consensus 51 ~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (287)
T 1kpg_A 51 AKIDLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDE 128 (287)
T ss_dssp HHHHHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCC
T ss_pred HHHHHHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCC
Confidence 45667777877 88889999999999999999997764 59999999 8888887653 479999999976223
Q ss_pred CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCC----C-CccccchhhhhhHhhhhCCCccccCH
Q 030025 79 NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPE----N-GTHSKINSLADVLVMTQYPGGKERTK 153 (184)
Q Consensus 79 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (184)
..|+|++..+++|+++++...+++++.++|||||++++.++..+.... . +.................+++..++.
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 208 (287)
T 1kpg_A 129 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSI 208 (287)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCH
T ss_pred CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCH
Confidence 339999999999997555568999999999999999999987654211 0 00000001111111112345566799
Q ss_pred HHHHHHHHHcCCceeEEEee
Q 030025 154 HEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 154 ~~~~~~l~~aGf~~i~~~~~ 173 (184)
+++.++++++||+.+++...
T Consensus 209 ~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 209 PMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhCCcEEEEEEeC
Confidence 99999999999999988765
No 28
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.89 E-value=5e-23 Score=153.83 Aligned_cols=161 Identities=14% Similarity=0.162 Sum_probs=125.1
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ- 75 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~- 75 (184)
+..+.+.+++.++ +.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++++ +++.++.+|+.+
T Consensus 46 ~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 46 TDRLTDEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 3456778888887 8889999999999999999999987 689999999 8888877653 469999999988
Q ss_pred cCCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCH
Q 030025 76 SVPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTK 153 (184)
Q Consensus 76 ~~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (184)
+++.. |+|++..+++|+++.+ .++++++++|||||++++.++......... .......... .......++.
T Consensus 124 ~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~ 196 (273)
T 3bus_A 124 PFEDASFDAVWALESLHHMPDRG--RALREMARVLRPGGTVAIADFVLLAPVEGA----KKEAVDAFRA-GGGVLSLGGI 196 (273)
T ss_dssp CSCTTCEEEEEEESCTTTSSCHH--HHHHHHHTTEEEEEEEEEEEEEESSCCCHH----HHHHHHHHHH-HHTCCCCCCH
T ss_pred CCCCCCccEEEEechhhhCCCHH--HHHHHHHHHcCCCeEEEEEEeeccCCCChh----HHHHHHHHHh-hcCccCCCCH
Confidence 66543 9999999999998764 789999999999999999998765421110 0011111111 1124556799
Q ss_pred HHHHHHHHHcCCceeEEEeec
Q 030025 154 HEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 154 ~~~~~~l~~aGf~~i~~~~~~ 174 (184)
+++.++++++||+.+++....
T Consensus 197 ~~~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 197 DEYESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHHHHHHTTCEEEEEEECH
T ss_pred HHHHHHHHHcCCeEEEEEECc
Confidence 999999999999999887653
No 29
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.89 E-value=1.1e-22 Score=150.47 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=122.7
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ 75 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~ 75 (184)
.....+..+++.+. +.+..+|||||||+|.++..+++.+ ..+++++|+ +.+++.++++ +++.++.+|+.+
T Consensus 20 ~~~~~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 20 FTEEKYATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp CCHHHHHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 34566788888888 8889999999999999999999987 579999999 8898888653 479999999988
Q ss_pred -cCCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCH
Q 030025 76 -SVPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTK 153 (184)
Q Consensus 76 -~~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (184)
+.... |+|++..++||+++.. .++++++++|||||++++.++......... ..... .........++.
T Consensus 98 ~~~~~~fD~V~~~~~~~~~~~~~--~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~ 167 (256)
T 1nkv_A 98 YVANEKCDVAACVGATWIAGGFA--GAEELLAQSLKPGGIMLIGEPYWRQLPATE------EIAQA--CGVSSTSDFLTL 167 (256)
T ss_dssp CCCSSCEEEEEEESCGGGTSSSH--HHHHHHTTSEEEEEEEEEEEEEETTCCSSH------HHHHT--TTCSCGGGSCCH
T ss_pred CCcCCCCCEEEECCChHhcCCHH--HHHHHHHHHcCCCeEEEEecCcccCCCChH------HHHHH--HhcccccccCCH
Confidence 44334 9999999999998654 789999999999999999998764432110 00000 000112245689
Q ss_pred HHHHHHHHHcCCceeEEEee
Q 030025 154 HEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 154 ~~~~~~l~~aGf~~i~~~~~ 173 (184)
.++.++++++||+.+++...
T Consensus 168 ~~~~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 168 PGLVGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHHHHHHTTTBCCCEEEEC
T ss_pred HHHHHHHHHCCCeeEEEEeC
Confidence 99999999999999887543
No 30
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.89 E-value=2.3e-22 Score=147.73 Aligned_cols=160 Identities=16% Similarity=0.325 Sum_probs=123.5
Q ss_pred cccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc
Q 030025 3 NHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ 75 (184)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~ 75 (184)
+++......+++.+. ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++. +++.++.+|+.+
T Consensus 4 ~~~~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 80 (239)
T 1xxl_A 4 HHHHHSLGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES 80 (239)
T ss_dssp --CHHHHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB
T ss_pred cccCCCcchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccccc
Confidence 456677788889988 89999999999999999999999864 8999999 8898887653 679999999987
Q ss_pred -cCCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHh-hhhCCCcccc
Q 030025 76 -SVPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLV-MTQYPGGKER 151 (184)
Q Consensus 76 -~~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 151 (184)
+++. . |+|++..++||+++.. .++++++++|||||++++.+...+... .......... .........+
T Consensus 81 ~~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 152 (239)
T 1xxl_A 81 LPFPDDSFDIITCRYAAHHFSDVR--KAVREVARVLKQDGRFLLVDHYAPEDP------VLDEFVNHLNRLRDPSHVRES 152 (239)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECBCSSH------HHHHHHHHHHHHHCTTCCCCC
T ss_pred CCCCCCcEEEEEECCchhhccCHH--HHHHHHHHHcCCCcEEEEEEcCCCCCh------hHHHHHHHHHHhccccccCCC
Confidence 5554 3 9999999999998764 789999999999999999987764421 1111111111 1111224567
Q ss_pred CHHHHHHHHHHcCCceeEEEee
Q 030025 152 TKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 152 ~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
+.++|.++|+++||+.+++...
T Consensus 153 ~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 153 SLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp BHHHHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHCCCcEEEEEee
Confidence 9999999999999998876653
No 31
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.89 E-value=5.8e-23 Score=153.75 Aligned_cols=162 Identities=17% Similarity=0.281 Sum_probs=119.3
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cCCCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SVPNG 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~~~~ 80 (184)
...+..... +++..+|||||||+|.++..+++.+|..+++++|+ +.+++.++++ +++.++.+|+.+ +++..
T Consensus 26 ~~~l~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 104 (276)
T 3mgg_A 26 EKLLHHDTV-YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDS 104 (276)
T ss_dssp HHHHHTTCC-CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTT
T ss_pred HHHHhhccc-CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCC
Confidence 333333333 67889999999999999999999999999999999 8898887653 579999999987 55443
Q ss_pred --CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhh-HhhhhCCCccccCHHHHH
Q 030025 81 --DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADV-LVMTQYPGGKERTKHEFT 157 (184)
Q Consensus 81 --D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 157 (184)
|+|++..+++|+++++ .++++++++|||||++++.++........+........... .......++..++..++.
T Consensus 105 ~fD~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 182 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSPE--EALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIY 182 (276)
T ss_dssp CEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHH
T ss_pred CeeEEEEechhhhcCCHH--HHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 9999999999998775 78999999999999999988754322111111111111111 111112234556778999
Q ss_pred HHHHHcCCceeEEEee
Q 030025 158 TLATEAGFSGIRFVCF 173 (184)
Q Consensus 158 ~~l~~aGf~~i~~~~~ 173 (184)
++|+++||+.+++...
T Consensus 183 ~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 183 PLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHTTCEEEEEEEE
T ss_pred HHHHHCCCCeEEEeeE
Confidence 9999999999987754
No 32
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.89 E-value=1.4e-22 Score=153.29 Aligned_cols=157 Identities=14% Similarity=0.233 Sum_probs=123.2
Q ss_pred cHHhHHHHHHHh----cCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcc
Q 030025 5 TTLVLQKILEAY----KGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGD 72 (184)
Q Consensus 5 ~~~~~~~l~~~~----~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d 72 (184)
+......+++.+ . +.+..+|||||||+|..+..+++.+ ..+++++|+ +.+++.++++ +++.++.+|
T Consensus 63 ~~~~~~~l~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 140 (297)
T 2o57_A 63 SLRTDEWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhhccC-CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC
Confidence 345667888888 5 8889999999999999999999986 469999999 8898888653 579999999
Q ss_pred cCc-cCCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcc
Q 030025 73 MFQ-SVPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGK 149 (184)
Q Consensus 73 ~~~-~~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (184)
+.+ +++.. |+|++..++||+++. ..++++++++|||||++++.++......... .......... ...
T Consensus 141 ~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------~~~~~~~~~~--~~~ 210 (297)
T 2o57_A 141 FLEIPCEDNSYDFIWSQDAFLHSPDK--LKVFQECARVLKPRGVMAITDPMKEDGIDKS------SIQPILDRIK--LHD 210 (297)
T ss_dssp TTSCSSCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEECTTCCGG------GGHHHHHHHT--CSS
T ss_pred cccCCCCCCCEeEEEecchhhhcCCH--HHHHHHHHHHcCCCeEEEEEEeccCCCCchH------HHHHHHHHhc--CCC
Confidence 988 66543 999999999999875 4899999999999999999998765432111 1111111111 123
Q ss_pred ccCHHHHHHHHHHcCCceeEEEee
Q 030025 150 ERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 150 ~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
..+..++.++++++||+.+++...
T Consensus 211 ~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 211 MGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCCHHHHHHHHHHCCCeEEEEEEC
Confidence 458999999999999999988764
No 33
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.88 E-value=8.1e-22 Score=149.49 Aligned_cols=165 Identities=16% Similarity=0.250 Sum_probs=125.1
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP 78 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~ 78 (184)
.....+++.+. +++..+|||||||+|.++..+++.++ .+++++|+ +.+++.++++ .+++++.+|+.+. +
T Consensus 59 ~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 135 (302)
T 3hem_A 59 AKRKLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-D 135 (302)
T ss_dssp HHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-C
T ss_pred HHHHHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-C
Confidence 34567788887 88889999999999999999999876 79999999 8899888764 3799999999765 3
Q ss_pred CC-CEEEechhhhcCCh-------HHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccc-----cchhhhhhHhhhhC
Q 030025 79 NG-DAILIKWILHDWSD-------EHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHS-----KINSLADVLVMTQY 145 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 145 (184)
.. |+|++..++||+++ +....+++++.++|||||++++.+...+......... ..............
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIF 215 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTC
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcC
Confidence 33 99999999999954 4556899999999999999999988765421000000 00000122222223
Q ss_pred CCccccCHHHHHHHHHHcCCceeEEEeec
Q 030025 146 PGGKERTKHEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 146 ~~~~~~~~~~~~~~l~~aGf~~i~~~~~~ 174 (184)
+++..++.+++.++++++||+.+++....
T Consensus 216 p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 216 PGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp TTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 45667899999999999999999887654
No 34
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.88 E-value=2.3e-22 Score=149.91 Aligned_cols=156 Identities=15% Similarity=0.101 Sum_probs=120.3
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S 76 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~ 76 (184)
......+++.++.+++..+|||||||+|.++..+++. +..+++++|+ +.+++.++++ ++++++.+|+.+ +
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp HHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 3445666666654678899999999999999999998 7789999999 8888887664 569999999987 5
Q ss_pred CCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 77 VPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 77 ~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
++.. |+|++..+++|+. . ..++++++++|||||++++.++......... ........ . ....++..
T Consensus 110 ~~~~~fD~i~~~~~~~~~~-~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------~~~~~~~~-~--~~~~~~~~ 177 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNIG-F--ERGLNEWRKYLKKGGYLAVSECSWFTDERPA------EINDFWMD-A--YPEIDTIP 177 (267)
T ss_dssp CCTTCEEEEEESSCGGGTC-H--HHHHHHHGGGEEEEEEEEEEEEEESSSCCCH------HHHHHHHH-H--CTTCEEHH
T ss_pred CCCCCEEEEEEcCCceecC-H--HHHHHHHHHHcCCCCEEEEEEeeecCCCChH------HHHHHHHH-h--CCCCCCHH
Confidence 5443 9999999999993 3 3789999999999999999998754322110 11111111 1 12456899
Q ss_pred HHHHHHHHcCCceeEEEeec
Q 030025 155 EFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~~~~ 174 (184)
++.++++++||+.+++...+
T Consensus 178 ~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 178 NQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp HHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEECC
Confidence 99999999999999887764
No 35
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=3.1e-22 Score=148.21 Aligned_cols=156 Identities=15% Similarity=0.131 Sum_probs=120.2
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S 76 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~ 76 (184)
......+++.+..+++..+|||||||+|.++..+++..+. +++++|+ +.+++.++++ ++++++.+|+.+ +
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 31 PEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp HHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred HHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 4556677777754778889999999999999999999875 9999999 8898887654 359999999987 5
Q ss_pred CCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 77 VPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 77 ~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
++.. |+|++..++||++ . ..+++++.++|+|||++++.++......... ........ . ....++..
T Consensus 110 ~~~~~fD~v~~~~~l~~~~-~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~------~~~~~~~~-~--~~~~~~~~ 177 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIYNIG-F--ERGMNEWSKYLKKGGFIAVSEASWFTSERPA------EIEDFWMD-A--YPEISVIP 177 (257)
T ss_dssp SCTTCEEEEEEESCSCCCC-H--HHHHHHHHTTEEEEEEEEEEEEEESSSCCCH------HHHHHHHH-H--CTTCCBHH
T ss_pred CCCCCEEEEEecChHhhcC-H--HHHHHHHHHHcCCCcEEEEEEeeccCCCChH------HHHHHHHH-h--CCCCCCHH
Confidence 5543 9999999999994 3 3789999999999999999997654321110 11111111 1 12356899
Q ss_pred HHHHHHHHcCCceeEEEeec
Q 030025 155 EFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~~~~ 174 (184)
++.++++++||+.++....+
T Consensus 178 ~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 178 TCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHCCCeEEEEEECC
Confidence 99999999999999887654
No 36
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.88 E-value=1.6e-22 Score=149.43 Aligned_cols=151 Identities=17% Similarity=0.263 Sum_probs=119.3
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCCCC-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVPNG- 80 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~~~- 80 (184)
....+++.++ ..+..+|||||||+|.++..+++.. ..+++++|. +.+++.++++ +++.++.+|+.+ +++..
T Consensus 81 ~~~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 81 GSRNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSC
T ss_pred HHHHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCC
Confidence 3466777776 7788999999999999999999886 457999999 8888887654 579999999987 55443
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++..++||+++++...++++++++|||||++++.++...... . .... ......++.+++.++
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~------~---~~~~-----~~~~~~~~~~~~~~~ 224 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR------F---LVDK-----EDSSLTRSDIHYKRL 224 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC------E---EEET-----TTTEEEBCHHHHHHH
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc------c---eecc-----cCCcccCCHHHHHHH
Confidence 999999999999877778999999999999999999987543221 0 0000 112335689999999
Q ss_pred HHHcCCceeEEEeec
Q 030025 160 ATEAGFSGIRFVCFF 174 (184)
Q Consensus 160 l~~aGf~~i~~~~~~ 174 (184)
|+++||+.+++....
T Consensus 225 l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 225 FNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHTCCEEEEEECT
T ss_pred HHHCCCEEEEeeecC
Confidence 999999999887654
No 37
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.88 E-value=6.2e-22 Score=151.12 Aligned_cols=166 Identities=16% Similarity=0.239 Sum_probs=123.6
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSV 77 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~ 77 (184)
....+.+++.++ ..+..+|||||||+|.++..+++.+ +++++++|+ +.+++.+++. +++.++.+|+.+..
T Consensus 76 ~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 153 (318)
T 2fk8_A 76 YAKVDLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA 153 (318)
T ss_dssp HHHHHHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC
T ss_pred HHHHHHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC
Confidence 345667777777 7888999999999999999999886 569999999 8898888654 46999999987632
Q ss_pred CCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcc--c---cchhhhhhHhhhhCCCccccC
Q 030025 78 PNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTH--S---KINSLADVLVMTQYPGGKERT 152 (184)
Q Consensus 78 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~ 152 (184)
...|+|++..+++|+++++...+++++.++|||||++++.++..+........ . ..............+++..++
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 233 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPS 233 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCC
Confidence 33499999999999976666789999999999999999999876542100000 0 000001111111133456679
Q ss_pred HHHHHHHHHHcCCceeEEEee
Q 030025 153 KHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 153 ~~~~~~~l~~aGf~~i~~~~~ 173 (184)
.+++.++++++||+.+++...
T Consensus 234 ~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 234 TEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHHHHHHHTTCBCCCCEEC
T ss_pred HHHHHHHHHhCCCEEEEEEec
Confidence 999999999999999987654
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.88 E-value=2.5e-22 Score=143.85 Aligned_cols=137 Identities=15% Similarity=0.115 Sum_probs=111.7
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC--CEEEechhhhcCChHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG--DAILIKWILHDWSDEH 96 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~--D~i~~~~~l~~~~~~~ 96 (184)
..+|||+|||+|.++..+++. ..+++++|+ +.+++.++++ +++.++.+|+.+ +++.. |+|++..++||++.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 789999999999999999998 569999999 8999888774 789999999988 55433 9999999999998656
Q ss_pred HHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEEeec
Q 030025 97 CLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 97 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~~ 174 (184)
...++++++++|+|||++++.++..+.... ... .......++.+++.++++++||+.+++....
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEP---------MYH-----PVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEE---------ECC-----SSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhh---------hhc-----hhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 678999999999999999998866543100 000 0112345799999999999999999988664
No 39
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.88 E-value=7.7e-22 Score=142.17 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=111.4
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCC-CEEEechhhhcCChH
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNG-DAILIKWILHDWSDE 95 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~-D~i~~~~~l~~~~~~ 95 (184)
+++..+|||+|||+|.++..+++. ..+++++|+ +.+++.++++.++.+..+|+.+ +.... |+|++..++||++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHH
Confidence 556789999999999999999987 569999999 8999988877688899999987 53333 999999999999977
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcC-CceeEEEee
Q 030025 96 HCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAG-FSGIRFVCF 173 (184)
Q Consensus 96 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~i~~~~~ 173 (184)
+...++++++++|||||++++........... .. ......++.+++.++++++| |+.+++...
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~-------~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRD--------KL-------ARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC--------TT-------SCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCccccc--------cc-------chhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 77899999999999999999986544321100 00 01123469999999999999 999988754
No 40
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.87 E-value=5.1e-22 Score=142.58 Aligned_cols=144 Identities=8% Similarity=0.047 Sum_probs=111.4
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------------------CCceE
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------------------PGVKH 68 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------------------~~i~~ 68 (184)
...+++..+. +++..+|||+|||+|..+..++++ ..+++++|+ +.|++.|+++ +++++
T Consensus 10 ~l~~~~~~l~-~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 86 (203)
T 1pjz_A 10 DLQQYWSSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEI 86 (203)
T ss_dssp HHHHHHHHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEE
T ss_pred HHHHHHHhcc-cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEE
Confidence 3455566676 778899999999999999999997 569999999 8999887643 47999
Q ss_pred EEcccCc-cCC--CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhh
Q 030025 69 VGGDMFQ-SVP--NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQ 144 (184)
Q Consensus 69 ~~~d~~~-~~~--~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (184)
+++|+.+ +.+ .. |+|++..++||+++++...++++++++|||||++++.....+... .
T Consensus 87 ~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~----------~-------- 148 (203)
T 1pjz_A 87 WCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL----------L-------- 148 (203)
T ss_dssp EEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS----------S--------
T ss_pred EECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc----------c--------
Confidence 9999988 543 23 999999999999987777899999999999999665554332210 0
Q ss_pred CCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 145 YPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 145 ~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
......++.+++.+++++ ||+.+.+...
T Consensus 149 ~~~~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 149 EGPPFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp SSCCCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred CCCCCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 001112578999999998 9998766543
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.87 E-value=3.4e-22 Score=150.42 Aligned_cols=168 Identities=16% Similarity=0.192 Sum_probs=122.0
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ- 75 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~- 75 (184)
++......+++.+..+.+..+|||||||+|.++..+++.+|. .+++++|+ +.+++.++++ .++.++.+|+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 84 (284)
T 3gu3_A 5 YNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI 84 (284)
T ss_dssp CCHHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC
T ss_pred cchHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc
Confidence 345667777777754778899999999999999999999884 89999999 8888877653 379999999998
Q ss_pred cCCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec-----CCCCC-CC--ccccchhhhhhHh-hhhC
Q 030025 76 SVPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL-----PELPE-NG--THSKINSLADVLV-MTQY 145 (184)
Q Consensus 76 ~~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~-----~~~~~-~~--~~~~~~~~~~~~~-~~~~ 145 (184)
++++. |+|++..+++|+++.+ .++++++++|||||++++.++.. .-... .. .......+..... ....
T Consensus 85 ~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (284)
T 3gu3_A 85 ELNDKYDIAICHAFLLHMTTPE--TMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQR 162 (284)
T ss_dssp CCSSCEEEEEEESCGGGCSSHH--HHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHH
T ss_pred CcCCCeeEEEECChhhcCCCHH--HHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhh
Confidence 55555 9999999999998764 78999999999999999998761 10000 00 0000001111111 0111
Q ss_pred CCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 146 PGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 146 ~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
.+....+..++.++++++||+.+++...
T Consensus 163 ~~~~~~~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 163 NGKDGNIGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp TCCCTTGGGTHHHHHHHTTCEEEEEEEC
T ss_pred hcccccHHHHHHHHHHHcCCCeEEEEEc
Confidence 1333456788999999999999977543
No 42
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.87 E-value=2.6e-22 Score=149.30 Aligned_cols=163 Identities=15% Similarity=0.115 Sum_probs=116.5
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC-CEEEech-hhhcCCh
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG-DAILIKW-ILHDWSD 94 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~-D~i~~~~-~l~~~~~ 94 (184)
++..+|||||||+|.++..+++.. .+++++|+ +.+++.++++ +++.++.+|+.+ +.+.. |+|++.. +++|+++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCC
Confidence 466899999999999999999884 58999999 8999988764 689999999988 55444 9999998 9999974
Q ss_pred -HHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcccc---------ch-----------hhhhhHhhh----------
Q 030025 95 -EHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSK---------IN-----------SLADVLVMT---------- 143 (184)
Q Consensus 95 -~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~---------~~-----------~~~~~~~~~---------- 143 (184)
++...++++++++|+|||++++.+...+.......... .. .........
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHH 206 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEE
Confidence 45568999999999999999997554433211100000 00 000000000
Q ss_pred -hCCCccccCHHHHHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 144 -QYPGGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 144 -~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
.....+.++.++|.++|+++||+++++........++.+.|
T Consensus 207 ~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 207 EESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 00013356899999999999999998876665555555543
No 43
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.87 E-value=4.3e-21 Score=140.79 Aligned_cols=142 Identities=18% Similarity=0.231 Sum_probs=111.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CCceEEEcccCc-cCCCC--CEEEechhhhcC
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PGVKHVGGDMFQ-SVPNG--DAILIKWILHDW 92 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~i~~~~~d~~~-~~~~~--D~i~~~~~l~~~ 92 (184)
++..+|||||||+|.++..+++. ..+++++|+ +.+++.+++. ++++++.+|+.+ +++.. |+|++..++||+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 46789999999999999999997 569999999 8899888775 789999999988 55443 999999999999
Q ss_pred ChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEEe
Q 030025 93 SDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVC 172 (184)
Q Consensus 93 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~ 172 (184)
+++. .++++++++|+|||++++.+......... . ..... .........++..++.++++++||+.++...
T Consensus 130 ~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---~---~~~~~--~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 130 EEPL--RALNEIKRVLKSDGYACIAILGPTAKPRE---N---SYPRL--YGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp SCHH--HHHHHHHHHEEEEEEEEEEEECTTCGGGG---G---GGGGG--GTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCHH--HHHHHHHHHhCCCeEEEEEEcCCcchhhh---h---hhhhh--ccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 8764 78999999999999999988654332110 0 01110 0011123457999999999999999998775
Q ss_pred e
Q 030025 173 F 173 (184)
Q Consensus 173 ~ 173 (184)
.
T Consensus 200 ~ 200 (242)
T 3l8d_A 200 V 200 (242)
T ss_dssp E
T ss_pred c
Confidence 4
No 44
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.87 E-value=5.2e-22 Score=145.97 Aligned_cols=159 Identities=15% Similarity=0.201 Sum_probs=114.4
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-C-CceEEEcccCccCC-CC-CEE
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-P-GVKHVGGDMFQSVP-NG-DAI 83 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~-~i~~~~~d~~~~~~-~~-D~i 83 (184)
.+.+++.+....+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++. + +++++.+|+.+..+ .. |+|
T Consensus 30 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v 107 (250)
T 2p7i_A 30 HPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNI 107 (250)
T ss_dssp HHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEE
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEE
Confidence 344555554344678999999999999999998865 7899999 8898888764 2 89999999987433 33 999
Q ss_pred EechhhhcCChHHHHHHHHHHH-hhCCCCcEEEEEeeecCCCCCC-----CccccchhhhhhHhhhhCCCccccCHHHHH
Q 030025 84 LIKWILHDWSDEHCLKLLKNCH-KSIPEGGKVIVVESVLPELPEN-----GTHSKINSLADVLVMTQYPGGKERTKHEFT 157 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~-~~L~pgG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (184)
++.+++||+++++ .++++++ ++|||||++++.++........ ............. . .......++.+++.
T Consensus 108 ~~~~~l~~~~~~~--~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 183 (250)
T 2p7i_A 108 VLTHVLEHIDDPV--ALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAE-F-AHGHRCTYALDTLE 183 (250)
T ss_dssp EEESCGGGCSSHH--HHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHH-H-HTTCCCCCCHHHHH
T ss_pred EEhhHHHhhcCHH--HHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhccccc-c-cccccccCCHHHHH
Confidence 9999999998764 7899999 9999999999988754321000 0000000000000 0 11234567999999
Q ss_pred HHHHHcCCceeEEEee
Q 030025 158 TLATEAGFSGIRFVCF 173 (184)
Q Consensus 158 ~~l~~aGf~~i~~~~~ 173 (184)
++++++||+.++....
T Consensus 184 ~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 184 RDASRAGLQVTYRSGI 199 (250)
T ss_dssp HHHHHTTCEEEEEEEE
T ss_pred HHHHHCCCeEEEEeee
Confidence 9999999999987643
No 45
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.87 E-value=1.9e-22 Score=140.62 Aligned_cols=148 Identities=15% Similarity=0.150 Sum_probs=118.2
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCccCCC--CCEEEe
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQSVPN--GDAILI 85 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~~~~~--~D~i~~ 85 (184)
..+++.++ ..+..+|||+|||+|.++..+++... +++++|. +.+++.+++. +++.+..+| .+++. .|+|++
T Consensus 7 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 7 EEYLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILF 81 (170)
T ss_dssp TTTHHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEE
T ss_pred HHHHHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEE
Confidence 34566677 77888999999999999999999873 9999999 8888888764 889999999 33333 399999
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCC
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGF 165 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 165 (184)
..++||+++.+ .+++++++.|+|||++++.+.......... .....++.+++.++++ ||
T Consensus 82 ~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~--Gf 140 (170)
T 3i9f_A 82 ANSFHDMDDKQ--HVISEVKRILKDDGRVIIIDWRKENTGIGP-----------------PLSIRMDEKDYMGWFS--NF 140 (170)
T ss_dssp ESCSTTCSCHH--HHHHHHHHHEEEEEEEEEEEECSSCCSSSS-----------------CGGGCCCHHHHHHHTT--TE
T ss_pred ccchhcccCHH--HHHHHHHHhcCCCCEEEEEEcCccccccCc-----------------hHhhhcCHHHHHHHHh--Cc
Confidence 99999997654 789999999999999999987654432111 0123468999999999 99
Q ss_pred ceeEEEeecCceEEEEEe
Q 030025 166 SGIRFVCFFHNLWVMEFY 183 (184)
Q Consensus 166 ~~i~~~~~~~~~~~~~~~ 183 (184)
+.++........+.+.+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 141 VVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp EEEEEECSSTTEEEEEEE
T ss_pred EEEEccCCCCceEEEEEe
Confidence 999999887666665554
No 46
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=1e-21 Score=147.33 Aligned_cols=157 Identities=15% Similarity=0.178 Sum_probs=118.3
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC-CE
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG-DA 82 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~-D~ 82 (184)
.+.+.+++.+. ..+..+|||||||+|.++..+++ +..+++++|+ +.|++.+++. +++.++.+|+.+ +++.. |+
T Consensus 44 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~ 120 (279)
T 3ccf_A 44 QYGEDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDA 120 (279)
T ss_dssp SSCCHHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEE
T ss_pred HHHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCE
Confidence 34556777777 77889999999999999999998 6789999999 8999888765 789999999987 55444 99
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhh------hCCCccccCHHHH
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMT------QYPGGKERTKHEF 156 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 156 (184)
|++..++||+++++ .++++++++|||||++++..+..... .............. .......++.+++
T Consensus 121 v~~~~~l~~~~d~~--~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (279)
T 3ccf_A 121 VFSNAMLHWVKEPE--AAIASIHQALKSGGRFVAEFGGKGNI-----KYILEALYNALETLGIHNPQALNPWYFPSIGEY 193 (279)
T ss_dssp EEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECTTTT-----HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHH
T ss_pred EEEcchhhhCcCHH--HHHHHHHHhcCCCcEEEEEecCCcch-----HHHHHHHHHHHHhcCCccccCcCceeCCCHHHH
Confidence 99999999998765 78999999999999999977643221 00111111111000 0011235689999
Q ss_pred HHHHHHcCCceeEEEee
Q 030025 157 TTLATEAGFSGIRFVCF 173 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~ 173 (184)
.++|+++||+.+++...
T Consensus 194 ~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 194 VNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHTEEEEEEEEE
T ss_pred HHHHHHcCCEEEEEEEe
Confidence 99999999999876644
No 47
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.87 E-value=1.8e-21 Score=147.45 Aligned_cols=175 Identities=11% Similarity=0.132 Sum_probs=123.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---------CCceEEEcccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---------PGVKHVGGDMF 74 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---------~~i~~~~~d~~ 74 (184)
.......+++.++ . +..+|||||||+|.++..+++. ..+++++|+ +.+++.++++ .+++++++|+.
T Consensus 68 ~~~~~~~~~~~~~-~-~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 68 GTSEAREFATRTG-P-VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp CHHHHHHHHHHHC-C-CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred ccHHHHHHHHhhC-C-CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 3455677777776 3 3449999999999999999987 578999999 8999888764 46999999999
Q ss_pred c-cCCCC-CEEEe-chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcccc--ch----h----------
Q 030025 75 Q-SVPNG-DAILI-KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSK--IN----S---------- 135 (184)
Q Consensus 75 ~-~~~~~-D~i~~-~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~----~---------- 135 (184)
+ +.+.. |+|++ ..++|++++++...+|++++++|+|||+|++..+............. .. .
T Consensus 144 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 223 (299)
T 3g2m_A 144 AFALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLP 223 (299)
T ss_dssp BCCCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEE
T ss_pred cCCcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEec
Confidence 8 55544 98885 57788887777789999999999999999998765432100000000 00 0
Q ss_pred ---hhhhHhh----------hhCCCccccCHHHHHHHHHHcCCceeEEEeec------CceEEEEEe
Q 030025 136 ---LADVLVM----------TQYPGGKERTKHEFTTLATEAGFSGIRFVCFF------HNLWVMEFY 183 (184)
Q Consensus 136 ---~~~~~~~----------~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~~------~~~~~~~~~ 183 (184)
...+... ......+.++.+++.++|+++||+++++.... ....++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 224 AEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp EEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred cccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 0000000 00001235799999999999999999988764 335667664
No 48
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.86 E-value=1.8e-21 Score=148.25 Aligned_cols=155 Identities=10% Similarity=0.079 Sum_probs=118.9
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~ 78 (184)
..+.+++.++.+++..+|||+|||+|.++..+++++ ..+++++|+ +.+++.++++ ++++++.+|+.+ +++
T Consensus 104 ~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 104 QAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC
Confidence 344566666546778999999999999999999986 579999999 8899888763 479999999988 655
Q ss_pred CC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH
Q 030025 79 NG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF 156 (184)
Q Consensus 79 ~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (184)
.. |+|++..++||++ ...+++++.++|||||++++.+........... . ......... ....++.+++
T Consensus 183 ~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~----~~~~~~~~~--~~~~~s~~~~ 252 (312)
T 3vc1_A 183 KGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPS-K----WVSQINAHF--ECNIHSRREY 252 (312)
T ss_dssp TTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCC-H----HHHHHHHHH--TCCCCBHHHH
T ss_pred CCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchh-H----HHHHHHhhh--cCCCCCHHHH
Confidence 43 9999999999995 347999999999999999999987655321111 1 111111111 1235689999
Q ss_pred HHHHHHcCCceeEEEee
Q 030025 157 TTLATEAGFSGIRFVCF 173 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~ 173 (184)
.++++++||+.+++...
T Consensus 253 ~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 253 LRAMADNRLVPHTIVDL 269 (312)
T ss_dssp HHHHHTTTEEEEEEEEC
T ss_pred HHHHHHCCCEEEEEEeC
Confidence 99999999999988764
No 49
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.86 E-value=6.9e-22 Score=145.25 Aligned_cols=138 Identities=16% Similarity=0.226 Sum_probs=111.3
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cCCC-C-CEEEechhhh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SVPN-G-DAILIKWILH 90 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~~~-~-D~i~~~~~l~ 90 (184)
+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++++ .++.++.+|+.+ +.+. . |+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 57899999999999999998886 569999999 8899888764 248899999877 4444 3 9999999999
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRF 170 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~ 170 (184)
|+++++...++++++++|+|||++++.++..... ..+.. ......++.+++.++|+++||+.++.
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----------~~~~~-----~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG----------VILDD-----VDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS----------EEEET-----TTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc----------ceecc-----cCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 9998777789999999999999999999876541 01110 11223458999999999999999988
Q ss_pred Eeec
Q 030025 171 VCFF 174 (184)
Q Consensus 171 ~~~~ 174 (184)
....
T Consensus 223 ~~~~ 226 (241)
T 2ex4_A 223 ERQE 226 (241)
T ss_dssp EECC
T ss_pred eecC
Confidence 7653
No 50
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.86 E-value=3.4e-21 Score=139.53 Aligned_cols=156 Identities=14% Similarity=0.127 Sum_probs=112.8
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----------CCceEEEcc
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----------PGVKHVGGD 72 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~i~~~~~d 72 (184)
.....+.+++.+. ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.++++ ++++++.+|
T Consensus 14 ~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 14 NQQRLGTVVAVLK-SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHH-HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred hHHHHHHHHHHHh-hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 3444566667766 56788999999999999999999888889999999 8899888764 189999999
Q ss_pred cCc-cCC-C-CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcc
Q 030025 73 MFQ-SVP-N-GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGK 149 (184)
Q Consensus 73 ~~~-~~~-~-~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (184)
+.. +.+ . .|+|++..+++|+++++...++++++++|||||.++.... .+....... .... .........
T Consensus 93 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~-~~~~~~~~~------~~~~-~~~~~~~~~ 164 (219)
T 3jwg_A 93 LVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN-KEYNFHYGN------LFEG-NLRHRDHRF 164 (219)
T ss_dssp SSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB-GGGGGCCCC------T------GGGCCTT
T ss_pred ccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc-hhhhhhhcc------cCcc-cccccCcee
Confidence 976 433 2 3999999999999988777999999999999996655443 221100000 0000 000011233
Q ss_pred ccCHHHHH----HHHHHcCCceeE
Q 030025 150 ERTKHEFT----TLATEAGFSGIR 169 (184)
Q Consensus 150 ~~~~~~~~----~~l~~aGf~~i~ 169 (184)
.++.+++. ++++++||++..
T Consensus 165 ~~~~~~l~~~~~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 165 EWTRKEFQTWAVKVAEKYGYSVRF 188 (219)
T ss_dssp SBCHHHHHHHHHHHHHHHTEEEEE
T ss_pred eecHHHHHHHHHHHHHHCCcEEEE
Confidence 46888888 889999997543
No 51
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.86 E-value=2.6e-21 Score=151.28 Aligned_cols=144 Identities=19% Similarity=0.298 Sum_probs=112.6
Q ss_pred CCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC--------------CCceEEEcccCc-------c
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY--------------PGVKHVGGDMFQ-------S 76 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~--------------~~i~~~~~d~~~-------~ 76 (184)
.+..+|||||||+|.++..+++.+ +..+++++|+ +.+++.++++ +++.++.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 467899999999999999999986 7889999999 8899888764 689999999986 3
Q ss_pred CCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 77 VPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 77 ~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
++.. |+|++..+++|+++.. .++++++++|||||+|++.+......... ................++.+
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 232 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKL--ALFKEIHRVLRDGGELYFSDVYADRRLSE-------AAQQDPILYGECLGGALYLE 232 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEEEESSCCCH-------HHHHCHHHHHTTCTTCCBHH
T ss_pred CCCCCEEEEEEccchhcCCCHH--HHHHHHHHHcCCCCEEEEEEeccccccCH-------hHhhhHHHhhcccccCCCHH
Confidence 4443 9999999999998764 79999999999999999998776542111 01111111112234567889
Q ss_pred HHHHHHHHcCCceeEEEe
Q 030025 155 EFTTLATEAGFSGIRFVC 172 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~~ 172 (184)
+|.++|+++||+.+++..
T Consensus 233 ~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 233 DFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHCCCceEEEEe
Confidence 999999999999887654
No 52
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.86 E-value=3.6e-21 Score=146.19 Aligned_cols=165 Identities=17% Similarity=0.154 Sum_probs=118.3
Q ss_pred CCCCCeEEEecCCcChHHHHHH-hhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCC-CEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAIT-SKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~-~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~-D~i~~~~ 87 (184)
+++..+|||||||+|..+..++ ...+..+++++|+ +.+++.++++ ++++++.+|+.+ +++.. |+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 5778999999999999999986 5678899999999 8898888653 349999999988 55544 9999999
Q ss_pred hhhcCChHH-HHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhh-------hHhhhhCCC---ccccCHHHH
Q 030025 88 ILHDWSDEH-CLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLAD-------VLVMTQYPG---GKERTKHEF 156 (184)
Q Consensus 88 ~l~~~~~~~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~ 156 (184)
++||+++++ ...++++++++|||||++++.+...+...... ..+...... ......... ...++.+++
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPD-SPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTT-CCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCccccc-ccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 999997554 34689999999999999999886654322111 111000000 000110101 134799999
Q ss_pred HHHHHHcCCceeEEEeec-CceEEEEEeC
Q 030025 157 TTLATEAGFSGIRFVCFF-HNLWVMEFYK 184 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~~-~~~~~~~~~~ 184 (184)
.++++++||+.+++.... .....+.+.|
T Consensus 275 ~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 999999999999988653 3333455544
No 53
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=2.1e-21 Score=143.82 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=116.5
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG- 80 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~- 80 (184)
.......+++.++ ..+..+|||||||+|.++..+++.+|..+++++|+ +.|++.+++. +++.++.+|+.+ +.+..
T Consensus 18 ~~~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~f 96 (259)
T 2p35_A 18 RTRPARDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKA 96 (259)
T ss_dssp GGHHHHHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCE
T ss_pred HHHHHHHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCc
Confidence 4455677888887 77889999999999999999999988899999999 8999888764 789999999987 52223
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHh---hhh------CCCcccc
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLV---MTQ------YPGGKER 151 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~ 151 (184)
|+|++..++||+++.. .++++++++|+|||++++.++..... .. ......... +.. ......+
T Consensus 97 D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (259)
T 2p35_A 97 DLLYANAVFQWVPDHL--AVLSQLMDQLESGGVLAVQMPDNLQE---PT---HIAMHETADGGPWKDAFSGGGLRRKPLP 168 (259)
T ss_dssp EEEEEESCGGGSTTHH--HHHHHHGGGEEEEEEEEEEEECCTTS---HH---HHHHHHHHHHSTTGGGC-------CCCC
T ss_pred CEEEEeCchhhCCCHH--HHHHHHHHhcCCCeEEEEEeCCCCCc---HH---HHHHHHHhcCcchHHHhccccccccCCC
Confidence 9999999999997654 78999999999999999988643221 00 000101100 000 0123457
Q ss_pred CHHHHHHHHHHcCCce
Q 030025 152 TKHEFTTLATEAGFSG 167 (184)
Q Consensus 152 ~~~~~~~~l~~aGf~~ 167 (184)
+.+++.++|+++||++
T Consensus 169 ~~~~~~~~l~~aGf~v 184 (259)
T 2p35_A 169 PPSDYFNALSPKSSRV 184 (259)
T ss_dssp CHHHHHHHHGGGEEEE
T ss_pred CHHHHHHHHHhcCCce
Confidence 9999999999999974
No 54
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.86 E-value=2.2e-21 Score=140.40 Aligned_cols=154 Identities=11% Similarity=0.096 Sum_probs=112.0
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----------CCceEEEccc
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----------PGVKHVGGDM 73 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~i~~~~~d~ 73 (184)
....+.+++.+. ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.++++ +++.++.+|+
T Consensus 15 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 15 QQRMNGVVAALK-QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHHH-hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 345566777776 66788999999999999999999888889999999 8898888654 2799999998
Q ss_pred Cc-cCC--CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc
Q 030025 74 FQ-SVP--NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE 150 (184)
Q Consensus 74 ~~-~~~--~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (184)
.. +.+ ..|+|++..+++|+++++...++++++++|||||.+++.......... . .... ...........
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~-~------~~~~-~~~~~~~~~~~ 165 (217)
T 3jwh_A 94 TYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKF-A------NLPA-GKLRHKDHRFE 165 (217)
T ss_dssp TSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHT-C------------------CCSC
T ss_pred ccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhh-c------cccc-ccccccccccc
Confidence 76 333 239999999999999887779999999999999977765532100000 0 0000 00000112234
Q ss_pred cCHHHHH----HHHHHcCCcee
Q 030025 151 RTKHEFT----TLATEAGFSGI 168 (184)
Q Consensus 151 ~~~~~~~----~~l~~aGf~~i 168 (184)
++.+++. ++++++||++.
T Consensus 166 ~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 166 WTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp BCHHHHHHHHHHHHHHSSEEEE
T ss_pred cCHHHHHHHHHHHHHHcCceEE
Confidence 6888888 89999999864
No 55
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.86 E-value=2.4e-21 Score=140.82 Aligned_cols=171 Identities=13% Similarity=0.119 Sum_probs=119.1
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCC-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPN- 79 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~- 79 (184)
+.+.+++.+ ++..+|||+|||+|.++..+++..+ +++++|+ +.+++.++++ ++++++.+|+.+ +++.
T Consensus 28 ~~~~l~~~~---~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 28 LEPLLMKYM---KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHHSC---CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTT
T ss_pred HHHHHHHhc---CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCC
Confidence 334444443 3478999999999999999998865 8999999 8898888764 689999999987 5553
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCc-------cccchhh-hhh---Hhh-h-hC
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGT-------HSKINSL-ADV---LVM-T-QY 145 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~-------~~~~~~~-~~~---~~~-~-~~ 145 (184)
. |+|++..++++...++...++++++++|+|||++++.++..+....... ..+.... .+. ... . ..
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKS 182 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC--
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEecc
Confidence 3 9999999977766666678999999999999999998875322100000 0000000 000 000 0 00
Q ss_pred C------CccccCHHHHHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 146 P------GGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 146 ~------~~~~~~~~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
. ....++ .++.++|+++||+.+++.......++++++|
T Consensus 183 ~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 183 EQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp ---CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred chhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 0 001122 5899999999999999999877888988875
No 56
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.85 E-value=2.8e-21 Score=141.43 Aligned_cols=163 Identities=17% Similarity=0.142 Sum_probs=115.4
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC-CEEEe-chhhhcCCh
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG-DAILI-KWILHDWSD 94 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~-D~i~~-~~~l~~~~~ 94 (184)
++..+|||+|||+|.++..+++..+ +++++|. +.+++.+++. +++.++.+|+.+ +.+.. |+|++ ..+++|+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 5678999999999999999999865 8999999 8999888765 789999999987 55444 99995 559999864
Q ss_pred -HHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcc-ccc-------------------hhhhhhHhhhhCC-------
Q 030025 95 -EHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTH-SKI-------------------NSLADVLVMTQYP------- 146 (184)
Q Consensus 95 -~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~------- 146 (184)
++...++++++++|+|||++++.+...+........ .+. .............
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHF 196 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEE
Confidence 566789999999999999999987655432111000 000 0000000000000
Q ss_pred ----CccccCHHHHHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 147 ----GGKERTKHEFTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 147 ----~~~~~~~~~~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
..+.++.++|.++|+++||+++.+....+...++.++|
T Consensus 197 ~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 197 SDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 11356999999999999997666555455666776664
No 57
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.85 E-value=8.3e-21 Score=141.88 Aligned_cols=166 Identities=10% Similarity=0.054 Sum_probs=118.8
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hh------HhhhCCCC-------CCceEE
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PH------VIQHSPEY-------PGVKHV 69 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~------~~~~a~~~-------~~i~~~ 69 (184)
+......+++.++ +.+..+|||||||+|.++..+++++ |..+++++|+ +. +++.++++ ++++++
T Consensus 28 ~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~ 106 (275)
T 3bkx_A 28 QTAHRLAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVH 106 (275)
T ss_dssp HHHHHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEE
T ss_pred HHHHHHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEE
Confidence 3455677888888 8889999999999999999999995 7789999999 54 77777553 479999
Q ss_pred Ecc-cC--c-cCCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhh-hHhh
Q 030025 70 GGD-MF--Q-SVPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLAD-VLVM 142 (184)
Q Consensus 70 ~~d-~~--~-~~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~ 142 (184)
.+| +. . +++. . |+|++..++||+++++ .+++.+.++++|||++++.+...+................ ....
T Consensus 107 ~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (275)
T 3bkx_A 107 FNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYA 184 (275)
T ss_dssp CSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHH
T ss_pred ECChhhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhh
Confidence 998 43 2 3343 3 9999999999998875 4788888888899999999987654311100000000000 0000
Q ss_pred hh----CCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 143 TQ----YPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 143 ~~----~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
.. ......++.+++.++++++||+.++....
T Consensus 185 ~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 185 IAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 00 11123679999999999999999877654
No 58
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.85 E-value=3.6e-21 Score=140.84 Aligned_cols=142 Identities=13% Similarity=0.122 Sum_probs=110.9
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCC
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG 80 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~ 80 (184)
..++.... +++ .+|||||||+|.++..+++ +..+++++|+ +.+++.++++ .+++++.+|+.+ +.+..
T Consensus 57 ~~~~~~~~-~~~-~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (235)
T 3lcc_A 57 VHLVDTSS-LPL-GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL 132 (235)
T ss_dssp HHHHHTTC-SCC-EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSC
T ss_pred HHHHHhcC-CCC-CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCC
Confidence 33444444 433 5999999999999999877 4678999999 8898888664 359999999998 33334
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++..++||+++++...++++++++|+|||++++.+......... ....++.+++.++
T Consensus 133 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~ 193 (235)
T 3lcc_A 133 FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG-------------------PPYKVDVSTFEEV 193 (235)
T ss_dssp EEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC-------------------SSCCCCHHHHHHH
T ss_pred eeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC-------------------CCccCCHHHHHHH
Confidence 99999999999986666799999999999999999977654332111 1112589999999
Q ss_pred HHHcCCceeEEEeec
Q 030025 160 ATEAGFSGIRFVCFF 174 (184)
Q Consensus 160 l~~aGf~~i~~~~~~ 174 (184)
|+++||+.+++...+
T Consensus 194 l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 194 LVPIGFKAVSVEENP 208 (235)
T ss_dssp HGGGTEEEEEEEECT
T ss_pred HHHcCCeEEEEEecC
Confidence 999999999887664
No 59
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.85 E-value=1.1e-20 Score=139.74 Aligned_cols=160 Identities=12% Similarity=0.065 Sum_probs=112.0
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CCceEEEcccCc-cCCCC--CE
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PGVKHVGGDMFQ-SVPNG--DA 82 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~i~~~~~d~~~-~~~~~--D~ 82 (184)
..+.+.++ ..+..+|||||||+|.++..+++..+. +++++|+ +.+++.+++. +++.++.+|+.+ +++.. |+
T Consensus 34 ~~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 34 HELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEE
Confidence 44555555 557899999999999999999998643 9999999 8898888764 689999999987 55433 99
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCC--CC--------CCCcccc-chhhhhh-----HhhhhCC
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPE--LP--------ENGTHSK-INSLADV-----LVMTQYP 146 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~--~~--------~~~~~~~-~~~~~~~-----~~~~~~~ 146 (184)
|++..++||+++. ..++++++++|||||++++..+.... .. ....... ....... .......
T Consensus 112 v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (253)
T 3g5l_A 112 VLSSLALHYIASF--DDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDV 189 (253)
T ss_dssp EEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEE
T ss_pred EEEchhhhhhhhH--HHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccC
Confidence 9999999999765 47999999999999999997543210 00 0000000 0000000 0000000
Q ss_pred CccccCHHHHHHHHHHcCCceeEEEee
Q 030025 147 GGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 147 ~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
....++.++|.++|+++||+.+++...
T Consensus 190 ~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 190 QKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp EEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred ccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 011239999999999999999988754
No 60
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.85 E-value=9.2e-21 Score=142.48 Aligned_cols=158 Identities=15% Similarity=0.163 Sum_probs=112.8
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c-CCC
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S-VPN 79 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~-~~~ 79 (184)
..++..++ .+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++. +++.++.+|+.+ + ++.
T Consensus 59 ~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 59 DRVLAEMG--PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHHTC--SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHHhcC--CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 34555555 33679999999999999999988 679999999 8899888764 578999999987 3 343
Q ss_pred -C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCc-cccchhhhhhH---hhhhCCCccccCH
Q 030025 80 -G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGT-HSKINSLADVL---VMTQYPGGKERTK 153 (184)
Q Consensus 80 -~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~ 153 (184)
. |+|++..+++|++++. .++++++++|||||++++.++.......... ........... ..........++.
T Consensus 135 ~~fD~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPR--SVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDP 212 (285)
T ss_dssp SCEEEEEEESCGGGCSCHH--HHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCH
T ss_pred CCceEEEECchhhcccCHH--HHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCH
Confidence 3 9999999999998764 7999999999999999998865422100000 00000000000 0000112356799
Q ss_pred HHHHHHHHHcCCceeEEEee
Q 030025 154 HEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 154 ~~~~~~l~~aGf~~i~~~~~ 173 (184)
+++.++++++||++++....
T Consensus 213 ~~l~~~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 213 TQVYLWLEEAGWQIMGKTGV 232 (285)
T ss_dssp HHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHCCCceeeeeeE
Confidence 99999999999999987765
No 61
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.84 E-value=3.5e-20 Score=135.94 Aligned_cols=160 Identities=15% Similarity=0.130 Sum_probs=112.8
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CCceEEEcccCc-cCCC-C-CE
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PGVKHVGGDMFQ-SVPN-G-DA 82 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~i~~~~~d~~~-~~~~-~-D~ 82 (184)
..+...++ ..+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++. .++.++.+|+.+ +++. . |+
T Consensus 33 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 33 PALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceE
Confidence 45666666 6678899999999999999999873 239999999 8898888765 479999999987 5543 3 99
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCC--CCCCCcc---------ccchhhh----hhHhhhhCCC
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPE--LPENGTH---------SKINSLA----DVLVMTQYPG 147 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~--~~~~~~~---------~~~~~~~----~~~~~~~~~~ 147 (184)
|++..++||+++.. .++++++++|+|||++++..+.... ....... ....... ..........
T Consensus 111 v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (243)
T 3bkw_A 111 AYSSLALHYVEDVA--RLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVV 188 (243)
T ss_dssp EEEESCGGGCSCHH--HHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCC
T ss_pred EEEeccccccchHH--HHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceE
Confidence 99999999997654 7899999999999999998753210 0000000 0000000 0000000112
Q ss_pred ccccCHHHHHHHHHHcCCceeEEEee
Q 030025 148 GKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 148 ~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
...++.++|.++|+++||+.+++...
T Consensus 189 ~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 189 KHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp EEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred EEeccHHHHHHHHHHcCCEeeeeccC
Confidence 23358999999999999999988753
No 62
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.84 E-value=4.6e-20 Score=138.13 Aligned_cols=155 Identities=21% Similarity=0.255 Sum_probs=114.9
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCc---ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCcc-
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSL---GNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQS- 76 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~---G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~~- 76 (184)
+.+...+++.+....+..+|||||||+ |.++..+.+.+|..+++++|+ +.|++.|+++ +++.++.+|+.++
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHH
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCch
Confidence 344555555554223558999999999 999888888889999999999 9999888764 6899999999751
Q ss_pred -----------C--CCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhh
Q 030025 77 -----------V--PNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMT 143 (184)
Q Consensus 77 -----------~--~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (184)
+ +..|+|++..++||+++++...+|++++++|+|||+|++.+...+. .. ........+...
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~----~~--~~~~~~~~~~~~ 215 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG----LP--AQQKLARITREN 215 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS----CH--HHHHHHHHHHHH
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc----hH--HHHHHHHHHHhc
Confidence 1 2239999999999999866678999999999999999999876522 10 111122222211
Q ss_pred hCCCccccCHHHHHHHHHHcCCceeE
Q 030025 144 QYPGGKERTKHEFTTLATEAGFSGIR 169 (184)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~aGf~~i~ 169 (184)
.. ....++.+++.++| +||+.++
T Consensus 216 ~~-~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 216 LG-EGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HS-CCCCBCHHHHHHTT--TTCEECT
T ss_pred CC-CCccCCHHHHHHHh--CCCeEcc
Confidence 11 34568999999999 5998775
No 63
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.84 E-value=1e-20 Score=140.27 Aligned_cols=159 Identities=14% Similarity=0.149 Sum_probs=112.3
Q ss_pred HhHHHHHHHh----cCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-
Q 030025 7 LVLQKILEAY----KGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ- 75 (184)
Q Consensus 7 ~~~~~l~~~~----~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~- 75 (184)
...+.+++.+ ..+.+..+|||+|||+|.++..+++. ..+++++|. +.+++.++++ +++.++.+|+.+
T Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 21 EVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI 98 (263)
T ss_dssp HHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC
Confidence 3445555555 12677889999999999999999987 579999999 8888877653 689999999987
Q ss_pred cCCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCC---Cccc
Q 030025 76 SVPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYP---GGKE 150 (184)
Q Consensus 76 ~~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (184)
+++.. |+|++..++||+++.. .++++++++|+|||++++. ...+.. .................... ....
T Consensus 99 ~~~~~~fD~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (263)
T 2yqz_A 99 PLPDESVHGVIVVHLWHLVPDWP--KVLAEAIRVLKPGGALLEG-WDQAEA--SPEWTLQERWRAFAAEEGFPVERGLHA 173 (263)
T ss_dssp CSCTTCEEEEEEESCGGGCTTHH--HHHHHHHHHEEEEEEEEEE-EEEECC--CHHHHHHHHHHHHHHHHTCCCCCCHHH
T ss_pred CCCCCCeeEEEECCchhhcCCHH--HHHHHHHHHCCCCcEEEEE-ecCCCc--cHHHHHHHHHHHHHHHhCCCccccccc
Confidence 55543 9999999999998654 7899999999999999997 222110 00000011111111111111 1235
Q ss_pred cCHHHHHHHHHHcCCceeEEEe
Q 030025 151 RTKHEFTTLATEAGFSGIRFVC 172 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~i~~~~ 172 (184)
++.+++.++++++||+.+.+..
T Consensus 174 ~~~~~~~~~l~~~Gf~~~~~~~ 195 (263)
T 2yqz_A 174 KRLKEVEEALRRLGLKPRTREV 195 (263)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCHHHHHHHHHHcCCCcceEEE
Confidence 6889999999999999776543
No 64
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=3.3e-20 Score=137.59 Aligned_cols=108 Identities=13% Similarity=0.127 Sum_probs=91.3
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCC--C
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNG--D 81 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~--D 81 (184)
..+.+.+.+..+ ...+|||||||+|..+..+++.+ .+++++|+ +.|++.|++++++.++++|+.+ ++++. |
T Consensus 27 ~~l~~~l~~~~~---~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD 101 (257)
T 4hg2_A 27 RALFRWLGEVAP---ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVD 101 (257)
T ss_dssp HHHHHHHHHHSS---CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEE
T ss_pred HHHHHHHHHhcC---CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCccc
Confidence 345555555533 45799999999999999999885 58999999 9999999999999999999998 77665 9
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
+|++..++||++.+ +++++++|+|||||+|++.+...
T Consensus 102 ~v~~~~~~h~~~~~---~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 102 VAIAAQAMHWFDLD---RFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp EEEECSCCTTCCHH---HHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEeeehhHhhHH---HHHHHHHHHcCCCCEEEEEECCC
Confidence 99999999988644 68999999999999999977644
No 65
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.83 E-value=9.5e-21 Score=137.37 Aligned_cols=158 Identities=16% Similarity=0.092 Sum_probs=113.8
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-----CC-C-C
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-----VP-N-G 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-----~~-~-~ 80 (184)
...+++.+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.++++.++.+...|+.+. .+ . .
T Consensus 41 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 41 DQAILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHHHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCE
T ss_pred cHHHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCc
Confidence 345677776 566799999999999999999988 569999999 89999998888899999888652 22 2 2
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccc-hh-hhhhHhhhhCCCccccCHHHHHH
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKI-NS-LADVLVMTQYPGGKERTKHEFTT 158 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 158 (184)
|+|++..++| ..+. ..++++++++|+|||++++.++.............. .. +..............++.++|.+
T Consensus 118 D~v~~~~~l~-~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (227)
T 3e8s_A 118 DLICANFALL-HQDI--IELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLN 194 (227)
T ss_dssp EEEEEESCCC-SSCC--HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHH
T ss_pred cEEEECchhh-hhhH--HHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHH
Confidence 9999999999 5544 378999999999999999988765443221110000 00 00000000000123459999999
Q ss_pred HHHHcCCceeEEEe
Q 030025 159 LATEAGFSGIRFVC 172 (184)
Q Consensus 159 ~l~~aGf~~i~~~~ 172 (184)
+|+++||+++++..
T Consensus 195 ~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 195 ALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHTTEEEEEEEC
T ss_pred HHHHcCCeEEEEec
Confidence 99999999998875
No 66
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.83 E-value=9.2e-20 Score=129.78 Aligned_cols=142 Identities=14% Similarity=0.098 Sum_probs=112.0
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cCCCC-
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SVPNG- 80 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~~~~- 80 (184)
..+++.+. ..+..+|||+|||+|.++..+++. ..+++++|. +.+++.+++. +++.++.+|+.+ +.+..
T Consensus 22 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (199)
T 2xvm_A 22 SEVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQY 98 (199)
T ss_dssp HHHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCE
T ss_pred HHHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCc
Confidence 45666776 667789999999999999999987 569999999 8888887653 479999999987 55444
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHH
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLA 160 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (184)
|+|++..++||+++++...+++++.++|+|||++++.+.......... ......++.+++.++|
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~ 162 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCT----------------VGFPFAFKEGELRRYY 162 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCC----------------SCCSCCBCTTHHHHHT
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCC----------------CCCCCccCHHHHHHHh
Confidence 999999999999866667899999999999999998876654321100 0122346889999999
Q ss_pred HHcCCceeEEEe
Q 030025 161 TEAGFSGIRFVC 172 (184)
Q Consensus 161 ~~aGf~~i~~~~ 172 (184)
++ |+.++...
T Consensus 163 ~~--f~~~~~~~ 172 (199)
T 2xvm_A 163 EG--WERVKYNE 172 (199)
T ss_dssp TT--SEEEEEEC
T ss_pred cC--CeEEEecc
Confidence 86 99887654
No 67
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.83 E-value=1.2e-20 Score=135.51 Aligned_cols=162 Identities=9% Similarity=-0.019 Sum_probs=113.3
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCCC-
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPNG- 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~~- 80 (184)
...+++.+....+..+|||+|||+|..+..++.. +..+++++|. +.+++.++++ .++.++.+|+.+ +++..
T Consensus 11 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~ 89 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDES 89 (209)
T ss_dssp HHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTC
T ss_pred HHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCc
Confidence 4444544443556789999999999985555544 4679999999 8899888764 679999999987 55443
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++..++||++.++...++++++++|+|||++++.+...++.............+.............++.+++.++
T Consensus 90 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 169 (209)
T 2p8j_A 90 MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKY 169 (209)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHT
T ss_pred eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHH
Confidence 9999999999997677789999999999999999999987654321111000000000000000001246799999999
Q ss_pred HHHcCCceeEEE
Q 030025 160 ATEAGFSGIRFV 171 (184)
Q Consensus 160 l~~aGf~~i~~~ 171 (184)
|+++||...+..
T Consensus 170 ~~~~g~~~~~~~ 181 (209)
T 2p8j_A 170 FKDMKVLFKEDR 181 (209)
T ss_dssp TTTSEEEEEEEE
T ss_pred HhhcCceeeeee
Confidence 999998766543
No 68
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.83 E-value=1.6e-20 Score=137.79 Aligned_cols=165 Identities=13% Similarity=0.076 Sum_probs=113.9
Q ss_pred HhHHHHHHHhcCC-CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCC
Q 030025 7 LVLQKILEAYKGF-EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 7 ~~~~~l~~~~~~~-~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~ 78 (184)
...+.+.+.+... .+..+|||+|||+|.++..+++. ..+++++|. +.+++.++++ .++.++.+|+.+ +.+
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 99 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN 99 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc
Confidence 3445555555421 36789999999999999999988 468999999 8999888764 279999999987 555
Q ss_pred CC-CEEEech-hhhcCC-hHHHHHHHHHHHhhCCCCcEEEEEeeecCCCC---CCCcc---------ccchh------hh
Q 030025 79 NG-DAILIKW-ILHDWS-DEHCLKLLKNCHKSIPEGGKVIVVESVLPELP---ENGTH---------SKINS------LA 137 (184)
Q Consensus 79 ~~-D~i~~~~-~l~~~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~---~~~~~---------~~~~~------~~ 137 (184)
.. |+|++.. ++||++ .++...++++++++|+|||++++..+...... ..... .+... ..
T Consensus 100 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSM 179 (246)
T ss_dssp CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEE
T ss_pred CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEE
Confidence 44 9999998 999994 35667899999999999999998544321100 00000 00000 00
Q ss_pred hhHhhh----------hCCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 138 DVLVMT----------QYPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 138 ~~~~~~----------~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
...... .....+.++.++|.++|+++||+.+++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 180 YISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 000000 000124569999999999999999988754
No 69
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=9.4e-20 Score=132.85 Aligned_cols=149 Identities=15% Similarity=0.115 Sum_probs=109.1
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----------CCceEEEcccCc-cCCCC--CEE
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----------PGVKHVGGDMFQ-SVPNG--DAI 83 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~i~~~~~d~~~-~~~~~--D~i 83 (184)
+++..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++. .++.+..+|+.+ +++.. |+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 347789999999999999999998 569999999 8888877652 147999999987 55443 999
Q ss_pred EechhhhcCChH-HHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhC---------------CC
Q 030025 84 LIKWILHDWSDE-HCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQY---------------PG 147 (184)
Q Consensus 84 ~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~ 147 (184)
++..+++|++++ +...++++++++|+|||++++.++....... ............... ..
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK----LYRKRYLHDFPITKEEGSFLARDPETGETEFI 181 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH----HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH----HHHHHhhhhccchhhhcceEecccccCCccee
Confidence 999999999754 3558999999999999999999876532210 000000000000000 01
Q ss_pred ccccCHHHHHHHHHHcCCceeEEEee
Q 030025 148 GKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 148 ~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
...++.+++.++|+++||+.+++...
T Consensus 182 ~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 182 AHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 23579999999999999999987653
No 70
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=9.2e-20 Score=134.08 Aligned_cols=158 Identities=13% Similarity=0.041 Sum_probs=110.8
Q ss_pred HHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CCceEEEcccCc-cCCC------
Q 030025 11 KILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PGVKHVGGDMFQ-SVPN------ 79 (184)
Q Consensus 11 ~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~i~~~~~d~~~-~~~~------ 79 (184)
.+...++.+.+..+|||+|||+|.++..+++..+ +++++|+ +.+++.++++ .+++++++|+.+ +.+.
T Consensus 46 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 46 DLPRFELLFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp HHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECccccccccccccccc
Confidence 3333333356778999999999999999999976 8999999 8899888654 589999999987 3221
Q ss_pred -CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcc-cc-chhhhhhH-hhhhCCCccccCHHH
Q 030025 80 -GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTH-SK-INSLADVL-VMTQYPGGKERTKHE 155 (184)
Q Consensus 80 -~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~ 155 (184)
.|+|++..++||+++++...++++++++|||||++++.+...++....... .. ........ ..........++.++
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAED 203 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHH
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHH
Confidence 399999999999997667799999999999999999998765431000000 00 00000000 000111122468999
Q ss_pred HHHHHHHcCCceeEEEe
Q 030025 156 FTTLATEAGFSGIRFVC 172 (184)
Q Consensus 156 ~~~~l~~aGf~~i~~~~ 172 (184)
+.++| +||++++...
T Consensus 204 ~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 204 IELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHC--TTEEEEEEEC
T ss_pred HHHHh--CCCEEEeccc
Confidence 99999 9999887543
No 71
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.82 E-value=3.2e-19 Score=129.20 Aligned_cols=136 Identities=18% Similarity=0.171 Sum_probs=103.7
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCC-C-CEEEechhhhcCChHHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPN-G-DAILIKWILHDWSDEHC 97 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~-~-D~i~~~~~l~~~~~~~~ 97 (184)
..+|||||||+|.++..+++. +++|. +.+++.+++. ++.++.+|+.+ +++. . |+|++..+++|+++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~- 119 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPE- 119 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHH-
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHH-
Confidence 789999999999999988764 99999 8899888776 79999999987 5544 3 9999999999997664
Q ss_pred HHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhh-HhhhhCCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 98 LKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADV-LVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 98 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
.+++++.++|+|||.+++.++..... ........ ...........++.+++.++|+++||+.+++...
T Consensus 120 -~~l~~~~~~L~pgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 120 -RALKEAYRILKKGGYLIVGIVDRESF-------LGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp -HHHHHHHHHEEEEEEEEEEEECSSSH-------HHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred -HHHHHHHHHcCCCcEEEEEEeCCccH-------HHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 78999999999999999988654221 00000000 0000011234579999999999999999988765
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.82 E-value=3.8e-19 Score=125.92 Aligned_cols=132 Identities=16% Similarity=0.220 Sum_probs=109.3
Q ss_pred HHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCC-C-CEEEe
Q 030025 11 KILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPN-G-DAILI 85 (184)
Q Consensus 11 ~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~-~-D~i~~ 85 (184)
.++..+ +++..+|||+|||+|.++..+++. ..+++++|. +.+++.+++. +++.++..|+.+ +++. . |+|++
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEE
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEE
Confidence 455555 357889999999999999999987 569999999 8888888765 679999999987 5543 3 99999
Q ss_pred c-hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcC
Q 030025 86 K-WILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAG 164 (184)
Q Consensus 86 ~-~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 164 (184)
. .+++|++.++...+++++.+.|+|||.+++..... ..++.+++.++++++|
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~---------------------------~~~~~~~~~~~l~~~G 166 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG---------------------------RGWVFGDFLEVAERVG 166 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT---------------------------SSCCHHHHHHHHHHHT
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC---------------------------CCcCHHHHHHHHHHcC
Confidence 8 78999887777899999999999999999965321 1147899999999999
Q ss_pred CceeEEEee
Q 030025 165 FSGIRFVCF 173 (184)
Q Consensus 165 f~~i~~~~~ 173 (184)
|+.++....
T Consensus 167 f~~~~~~~~ 175 (195)
T 3cgg_A 167 LELENAFES 175 (195)
T ss_dssp EEEEEEESS
T ss_pred CEEeeeecc
Confidence 999887654
No 73
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=1.6e-19 Score=133.59 Aligned_cols=133 Identities=8% Similarity=-0.129 Sum_probs=103.8
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC-----------------------CCCceEEEcccC
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE-----------------------YPGVKHVGGDMF 74 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----------------------~~~i~~~~~d~~ 74 (184)
..+..+|||+|||+|..+..|++. +.+++|+|+ +.|++.|++ ..+++++++|+.
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 356789999999999999999987 569999999 889887742 157899999999
Q ss_pred c-cCC--CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc
Q 030025 75 Q-SVP--NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE 150 (184)
Q Consensus 75 ~-~~~--~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (184)
+ +.+ .. |+|++..+++++++++...+++++.++|||||++++.....+.... ......
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~------------------~g~~~~ 205 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH------------------AGPPFY 205 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC------------------CCSSCC
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC------------------CCCCCC
Confidence 8 443 33 9999999999998777778999999999999999876654332100 000112
Q ss_pred cCHHHHHHHHHHcCCceeEEEe
Q 030025 151 RTKHEFTTLATEAGFSGIRFVC 172 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~i~~~~ 172 (184)
.+.+++.++|++ +|+++....
T Consensus 206 ~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 206 VPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp CCHHHHHHHHTT-TEEEEEEEE
T ss_pred CCHHHHHHHhhC-CeEEEEEec
Confidence 589999999987 598876653
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.82 E-value=9.3e-21 Score=143.15 Aligned_cols=145 Identities=15% Similarity=0.242 Sum_probs=105.7
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------------------------------------
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------------------------------------ 63 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------------------------------------ 63 (184)
+..+|||||||+|.++..+++.++..+++++|+ +.+++.|+++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999998899999999 8888877653
Q ss_pred ----------------------------CCceEEEcccCc-c-----CC-CC-CEEEechhhhcC----ChHHHHHHHHH
Q 030025 64 ----------------------------PGVKHVGGDMFQ-S-----VP-NG-DAILIKWILHDW----SDEHCLKLLKN 103 (184)
Q Consensus 64 ----------------------------~~i~~~~~d~~~-~-----~~-~~-D~i~~~~~l~~~----~~~~~~~~l~~ 103 (184)
.++.|..+|+.. . .. .. |+|++..+++|+ +++....+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 379999999986 2 12 23 999999999887 56677789999
Q ss_pred HHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHH--cCCceeEEEee
Q 030025 104 CHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATE--AGFSGIRFVCF 173 (184)
Q Consensus 104 ~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGf~~i~~~~~ 173 (184)
++++|+|||+|++....+....... .......... ....+.++++.++|.+ +||+.+++...
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~-----~~~~~~~~~~---~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRK-----TLTETIYKNY---YRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTT-----TSCHHHHHHH---HHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHhCCCcEEEEecCCchhhhhhh-----cccHHHHhhh---hcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 9999999999999654322110000 0000111111 1112357899999999 99998877654
No 75
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.81 E-value=1.3e-20 Score=148.82 Aligned_cols=154 Identities=12% Similarity=0.108 Sum_probs=112.7
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc-----ccCc-cC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG-----DMFQ-SV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~-----d~~~-~~ 77 (184)
....+..+++.+. .++..+|||||||+|.++..+++. ..+++++|+ +.+++.|++. ++..... +... ++
T Consensus 92 ~~~~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 92 FAMLARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhccc
Confidence 3455677778877 788899999999999999999987 459999999 8899988876 3333332 2222 22
Q ss_pred C-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHH
Q 030025 78 P-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHE 155 (184)
Q Consensus 78 ~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (184)
+ .. |+|++.+++||++++. .++++++++|||||++++..+...... ......... ..+...++.++
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~~---------~~~~~~~~~-~~~~~~~s~~~ 235 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQ--SVLEGVDALLAPDGVFVFEDPYLGDIV---------AKTSFDQIF-DEHFFLFSATS 235 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHH--HHHHHHHHHEEEEEEEEEEEECHHHHH---------HHTCGGGCS-TTCCEECCHHH
T ss_pred CCCCEEEEEECChHHhcCCHH--HHHHHHHHHcCCCeEEEEEeCChHHhh---------hhcchhhhh-hhhhhcCCHHH
Confidence 2 23 9999999999998664 799999999999999999776532210 000000000 12345679999
Q ss_pred HHHHHHHcCCceeEEEeec
Q 030025 156 FTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 156 ~~~~l~~aGf~~i~~~~~~ 174 (184)
+.++++++||+.+++...+
T Consensus 236 l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 236 VQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHcCCEEEEEEEcc
Confidence 9999999999999888753
No 76
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.81 E-value=4e-20 Score=134.34 Aligned_cols=158 Identities=16% Similarity=0.165 Sum_probs=112.1
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---cCCC-C-C
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---SVPN-G-D 81 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~~~~-~-D 81 (184)
+...+++.++ .+..+|||+|||+|.++..+++. + .+++++|. +.+++.+++.. ..+..+|+.+ +++. . |
T Consensus 21 ~~~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 21 VNPNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp CCHHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEE
T ss_pred HHHHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccC
Confidence 3445555554 56789999999999999999988 4 89999999 88988887653 3788899875 3333 3 9
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhh--HhhhhCCCccccCHHHHHHH
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADV--LVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 159 (184)
+|++..++||+++++ .+++++.++|+|||.+++..+........ .......+.. ...........++.+++.++
T Consensus 96 ~v~~~~~l~~~~~~~--~~l~~~~~~L~~gG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPW--AVIEKVKPYIKQNGVILASIPNVSHISVL--APLLAGNWTYTEYGLLDKTHIRFFTFNEMLRM 171 (230)
T ss_dssp EEEEESCGGGSSCHH--HHHHHTGGGEEEEEEEEEEEECTTSHHHH--HHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHH
T ss_pred EEEECChhhhcCCHH--HHHHHHHHHcCCCCEEEEEeCCcchHHHH--HHHhcCCceeccCCCCCcceEEEecHHHHHHH
Confidence 999999999998764 78999999999999999987654321000 0000000000 00000112345799999999
Q ss_pred HHHcCCceeEEEeec
Q 030025 160 ATEAGFSGIRFVCFF 174 (184)
Q Consensus 160 l~~aGf~~i~~~~~~ 174 (184)
++++||+.+++....
T Consensus 172 l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 172 FLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHTTEEEEEEEEEE
T ss_pred HHHcCCeEEEEEecc
Confidence 999999999887653
No 77
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.81 E-value=2.8e-20 Score=140.28 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=92.5
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMF 74 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~ 74 (184)
..+.+.+.+.++ ..+..+|||||||+|.++..+++. ..+++++|+ +.|++.++++ .++.+..+|+.
T Consensus 43 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 43 AEYKAWLLGLLR-QHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHhc-ccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 445566666666 567789999999999999999998 459999999 8899888542 57889999988
Q ss_pred c-c---CCC-C-CEEEec-hhhhcCCh-----HHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 75 Q-S---VPN-G-DAILIK-WILHDWSD-----EHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 75 ~-~---~~~-~-D~i~~~-~~l~~~~~-----~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+ + ++. . |+|++. .+++|+++ ++...++++++++|||||++++..+.
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 7 4 443 3 999998 89999987 55678999999999999999998754
No 78
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.80 E-value=4.7e-19 Score=129.88 Aligned_cols=106 Identities=20% Similarity=0.273 Sum_probs=86.7
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPN 79 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~ 79 (184)
.+.+.+.+.++ +..+|||+|||+|.++..+++. .+++++|+ +.+++.++++ .++.++.+|+.+ +.+.
T Consensus 22 ~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 95 (243)
T 3d2l_A 22 EWVAWVLEQVE---PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPE 95 (243)
T ss_dssp HHHHHHHHHSC---TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSS
T ss_pred HHHHHHHHHcC---CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCC
Confidence 34455555544 4589999999999999998887 69999999 8899888764 579999999987 5554
Q ss_pred C-CEEEech-hhhcC-ChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 80 G-DAILIKW-ILHDW-SDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 80 ~-D~i~~~~-~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
. |+|++.. +++|+ +.++...+++++.++|+|||++++..
T Consensus 96 ~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 96 PVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 4 9999986 99998 44566789999999999999999854
No 79
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.80 E-value=1.4e-19 Score=136.54 Aligned_cols=142 Identities=14% Similarity=0.059 Sum_probs=96.5
Q ss_pred CCCCeEEEecCCcChHHHH----HHhhCCCCeE--EEeec-hhHhhhCCCC-------CCceE--EEcccCc-c------
Q 030025 20 EHIKQLVDVGGSLGNTLKA----ITSKYPHIKG--INFDL-PHVIQHSPEY-------PGVKH--VGGDMFQ-S------ 76 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~----l~~~~~~~~~--~~~D~-~~~~~~a~~~-------~~i~~--~~~d~~~-~------ 76 (184)
.+..+|||||||+|.++.. ++.+++.+++ +++|. +.|++.++++ +++.+ ...+..+ +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3567999999999976653 4455677754 99999 8999877643 34444 4455443 2
Q ss_pred CCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhC-CCccccCH
Q 030025 77 VPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQY-PGGKERTK 153 (184)
Q Consensus 77 ~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 153 (184)
++. . |+|++.+++||+++++ .+|++++++|||||++++.+...... +............. .....++.
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~LkpgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 201 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIP--ATLKFFHSLLGTNAKMLIIVVSGSSG-------WDKLWKKYGSRFPQDDLCQYITS 201 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHH--HHHHHHHHTEEEEEEEEEEEECTTSH-------HHHHHHHHGGGSCCCTTCCCCCH
T ss_pred cCCCceeEEEEeeeeeecCCHH--HHHHHHHHHcCCCcEEEEEEecCCcc-------HHHHHHHHHHhccCCCcccCCCH
Confidence 223 3 9999999999999875 68999999999999999986542110 10011111000000 11245789
Q ss_pred HHHHHHHHHcCCceeEE
Q 030025 154 HEFTTLATEAGFSGIRF 170 (184)
Q Consensus 154 ~~~~~~l~~aGf~~i~~ 170 (184)
++|.++|+++||+.+..
T Consensus 202 ~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 202 DDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCceEEE
Confidence 99999999999998764
No 80
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.79 E-value=3.9e-19 Score=134.54 Aligned_cols=153 Identities=17% Similarity=0.147 Sum_probs=107.2
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCC--------CCCceEEEcccCc
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPE--------YPGVKHVGGDMFQ 75 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~--------~~~i~~~~~d~~~ 75 (184)
..+.+.+.... .++..+|||||||+|..+..+++.+ +..+++++|+ +.+++.+++ .++++++++|+.+
T Consensus 23 ~~~~~~l~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 23 SDFYKMIDEYH--DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHHHHHC--CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred HHHHHHHHHHh--cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 34455555543 3578999999999999999999886 8899999999 889988865 3689999999988
Q ss_pred -cCCC-------C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCC
Q 030025 76 -SVPN-------G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYP 146 (184)
Q Consensus 76 -~~~~-------~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (184)
+++. . |+|++..++||+ +. ..++++++++|+|||.+++.+...+.....+. ......-.......
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 174 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-DF--EKFQRSAYANLRKDGTIAIWGYADPIFPDYPE---FDDLMIEVPYGKQG 174 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-CH--HHHHHHHHHHEEEEEEEEEEEEEEEECTTCGG---GTTHHHHHHHCTTT
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-CH--HHHHHHHHHhcCCCcEEEEEecCCccccCcHH---HHHHHHHhccCccc
Confidence 5443 3 999999999999 44 47999999999999999995544322111110 00111111100000
Q ss_pred Cccc---cCHHHHHHHHHHcCCc
Q 030025 147 GGKE---RTKHEFTTLATEAGFS 166 (184)
Q Consensus 147 ~~~~---~~~~~~~~~l~~aGf~ 166 (184)
.+.. ...+.+.++++++||.
T Consensus 175 ~~~~w~~p~~~~~~~~l~~~gfp 197 (299)
T 3g5t_A 175 LGPYWEQPGRSRLRNMLKDSHLD 197 (299)
T ss_dssp TGGGSCTTHHHHHHTTTTTCCCC
T ss_pred ccchhhchhhHHHHHhhhccCCC
Confidence 1111 3456778999999994
No 81
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.79 E-value=1.7e-18 Score=127.73 Aligned_cols=108 Identities=15% Similarity=0.293 Sum_probs=87.9
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCCC-
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPNG- 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~~- 80 (184)
+..++..+. ..+..+|||+|||+|..+..+++. ..+++++|+ +.+++.++++ .++.++.+|+.+ +.+..
T Consensus 30 ~~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 30 VEEIFKEDA-KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 445555554 566789999999999999999987 569999999 8999888754 469999999987 55544
Q ss_pred CEEEec-hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 81 DAILIK-WILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 81 D~i~~~-~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
|+|++. ..+++++.++...++++++++|+|||.+++..+
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 999986 466777767778999999999999999988544
No 82
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.79 E-value=2.6e-19 Score=132.88 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=104.6
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CC-----------------------------
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PG----------------------------- 65 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~----------------------------- 65 (184)
..+..+|||+|||+|.++..+++..+ .+++++|. +.+++.+++. ..
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 34668999999999999998888754 58999999 8888887543 11
Q ss_pred ---c-eEEEcccCc--cCCC----C-CEEEechhhhcCCh--HHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcccc
Q 030025 66 ---V-KHVGGDMFQ--SVPN----G-DAILIKWILHDWSD--EHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSK 132 (184)
Q Consensus 66 ---i-~~~~~d~~~--~~~~----~-D~i~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 132 (184)
+ .+...|+.+ +.+. . |+|++..++|++++ ++...++++++++|||||++++.+...... .
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-----~-- 205 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY-----Y-- 205 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-----E--
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce-----E--
Confidence 7 899999987 2233 3 99999999995432 255689999999999999999988543210 0
Q ss_pred chhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEEeec
Q 030025 133 INSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~~ 174 (184)
..... ......++.+++.++|+++||+.+++....
T Consensus 206 --~~~~~-----~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 --MIGEQ-----KFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp --EETTE-----EEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred --EcCCc-----cccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 00000 001234589999999999999999887653
No 83
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.79 E-value=2.1e-19 Score=135.46 Aligned_cols=154 Identities=13% Similarity=0.017 Sum_probs=108.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cC-CC-C-CEEEec
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SV-PN-G-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~-~~-~-D~i~~~ 86 (184)
+.+..+|||||||+|..+..+++. +..+++++|+ +.+++.++++ .++.++.+|+.+ ++ +. . |+|++.
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 467889999999999999998876 4569999999 8898887664 358999999987 55 33 3 999999
Q ss_pred hhhhc--CChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCC--------CCCccc-------cchh----hhhhH--hhh
Q 030025 87 WILHD--WSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELP--------ENGTHS-------KINS----LADVL--VMT 143 (184)
Q Consensus 87 ~~l~~--~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--------~~~~~~-------~~~~----~~~~~--~~~ 143 (184)
.++|| ...++...+++++.++|+|||++++..+...... ...... .... .+... ...
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 220 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSV 220 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhh
Confidence 99998 4556667899999999999999999876532100 000000 0000 00000 000
Q ss_pred hCCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 144 QYPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 144 ~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
.......++.+++.++++++||+.++....
T Consensus 221 ~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 221 NNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp SSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred cCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 000123568999999999999999988654
No 84
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.79 E-value=7.1e-18 Score=117.69 Aligned_cols=128 Identities=14% Similarity=0.175 Sum_probs=101.1
Q ss_pred HHHHHHhcCC--CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCC-C-CEEE
Q 030025 10 QKILEAYKGF--EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPN-G-DAIL 84 (184)
Q Consensus 10 ~~l~~~~~~~--~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~-~-D~i~ 84 (184)
..+++.+. . .+..+|||+|||+|.++..++++. +++++|+ +.|++. .++++++.+|+.++++. . |+|+
T Consensus 11 ~~l~~~l~-~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~ 83 (170)
T 3q87_B 11 YTLMDALE-REGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVV 83 (170)
T ss_dssp HHHHHHHH-HHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEE
T ss_pred HHHHHHHH-hhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEE
Confidence 34444444 3 456799999999999999999886 9999999 889887 57899999999885543 3 9999
Q ss_pred echhhhcCChH-------HHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHH
Q 030025 85 IKWILHDWSDE-------HCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFT 157 (184)
Q Consensus 85 ~~~~l~~~~~~-------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (184)
++..+++.+++ +...+++++.+.+ |||++++.+... ...+++.
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------------------------~~~~~l~ 133 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------------------------NRPKEVL 133 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------------------------GCHHHHH
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----------------------------CCHHHHH
Confidence 99888865433 3346899999999 999999976422 1467889
Q ss_pred HHHHHcCCceeEEEeec
Q 030025 158 TLATEAGFSGIRFVCFF 174 (184)
Q Consensus 158 ~~l~~aGf~~i~~~~~~ 174 (184)
++++++||+.+.+....
T Consensus 134 ~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 134 ARLEERGYGTRILKVRK 150 (170)
T ss_dssp HHHHHTTCEEEEEEEEE
T ss_pred HHHHHCCCcEEEEEeec
Confidence 99999999988877653
No 85
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.79 E-value=1.1e-19 Score=135.34 Aligned_cols=140 Identities=14% Similarity=0.053 Sum_probs=100.2
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----C-----------------------------
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----P----------------------------- 64 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~----------------------------- 64 (184)
..+..+|||||||+|.++..++... ..+++++|+ +.|++.|++. +
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567899999999998877665553 137999999 8899877542 1
Q ss_pred --Cce-EEEcccCc--cCC----CC-CEEEechhhhcCC--hHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcccc
Q 030025 65 --GVK-HVGGDMFQ--SVP----NG-DAILIKWILHDWS--DEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSK 132 (184)
Q Consensus 65 --~i~-~~~~d~~~--~~~----~~-D~i~~~~~l~~~~--~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 132 (184)
++. ++.+|+.+ +++ .. |+|+++.++||+. .++...++++++++|||||+|++.+......
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-------- 203 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-------- 203 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE--------
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc--------
Confidence 122 88999987 321 23 9999999999963 2455689999999999999999987543221
Q ss_pred chhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 133 INSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
. ..... ......++.+++.++|+++||+.+++...
T Consensus 204 ~--~~g~~----~~~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 204 Y--MVGKR----EFSCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp E--EETTE----EEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred c--eeCCe----EeeccccCHHHHHHHHHHCCCEEEEEeec
Confidence 0 00000 00112458999999999999999988754
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=125.94 Aligned_cols=131 Identities=18% Similarity=0.177 Sum_probs=101.7
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCC--CEEEe
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNG--DAILI 85 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~--D~i~~ 85 (184)
..+++.+....+..+|||||||+|.++..++ .+++++|+ +. ++.+..+|+.+ +++.. |+|++
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------CceEEEeccccCCCCCCCEeEEEE
Confidence 3456665535567899999999999998763 58999998 44 68889999987 55543 99999
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCC
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGF 165 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 165 (184)
..++|+ .+. ..+++++.++|+|||++++.+.... ..+.+++.++++++||
T Consensus 122 ~~~l~~-~~~--~~~l~~~~~~L~~gG~l~i~~~~~~---------------------------~~~~~~~~~~l~~~Gf 171 (215)
T 2zfu_A 122 CLSLMG-TNI--RDFLEEANRVLKPGGLLKVAEVSSR---------------------------FEDVRTFLRAVTKLGF 171 (215)
T ss_dssp ESCCCS-SCH--HHHHHHHHHHEEEEEEEEEEECGGG---------------------------CSCHHHHHHHHHHTTE
T ss_pred ehhccc-cCH--HHHHHHHHHhCCCCeEEEEEEcCCC---------------------------CCCHHHHHHHHHHCCC
Confidence 999975 443 4789999999999999999874321 1278999999999999
Q ss_pred ceeEEEeecCceEEEEEeC
Q 030025 166 SGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 166 ~~i~~~~~~~~~~~~~~~~ 184 (184)
+.++.........++.+.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 172 KIVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp EEEEEECCSTTCEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEEe
Confidence 9988776656666666553
No 87
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.79 E-value=6.6e-19 Score=127.41 Aligned_cols=152 Identities=12% Similarity=0.086 Sum_probs=104.5
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhh----CCC------CCCceEEEcccCc-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQH----SPE------YPGVKHVGGDMFQ- 75 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~----a~~------~~~i~~~~~d~~~- 75 (184)
.....+..+. ..+..+|||||||+|.++..+++.+|..+++++|+ +.|++. +++ .+++.++++|+.+
T Consensus 15 ~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l 93 (218)
T 3mq2_A 15 FSDAEFEQLR-SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL 93 (218)
T ss_dssp CCHHHHHHHH-TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC
T ss_pred cCHHHHHHhh-ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC
Confidence 3455667777 77889999999999999999999999999999999 887764 222 2589999999988
Q ss_pred cCCCC-CEEE---echhhh--cCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcc
Q 030025 76 SVPNG-DAIL---IKWILH--DWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGK 149 (184)
Q Consensus 76 ~~~~~-D~i~---~~~~l~--~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (184)
+++.. |.|+ +....+ |++++ ..++++++++|||||++++.......... ....... .....
T Consensus 94 ~~~~~~d~v~~~~~~~~~~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---------~~~~~~~--~~~~~ 160 (218)
T 3mq2_A 94 PPLSGVGELHVLMPWGSLLRGVLGSS--PEMLRGMAAVCRPGASFLVALNLHAWRPS---------VPEVGEH--PEPTP 160 (218)
T ss_dssp CSCCCEEEEEEESCCHHHHHHHHTSS--SHHHHHHHHTEEEEEEEEEEEEGGGBTTB---------CGGGTTC--CCCCH
T ss_pred CCCCCCCEEEEEccchhhhhhhhccH--HHHHHHHHHHcCCCcEEEEEecccccccc---------ccccccC--Cccch
Confidence 55433 5544 333443 55554 37899999999999999995432211100 0000000 00112
Q ss_pred ccCHHHHHHHHHHcCCceeEEEee
Q 030025 150 ERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 150 ~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
.+..+++.++++++||++.++...
T Consensus 161 ~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 161 DSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCceeeecc
Confidence 234566888999999999887664
No 88
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.78 E-value=4.4e-18 Score=121.91 Aligned_cols=130 Identities=12% Similarity=0.164 Sum_probs=105.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~ 77 (184)
...+...++..+. ..+..+|||+|||+|.++..+++..|..+++++|. +.+++.++++ ++++++.+|+.+..
T Consensus 25 ~~~i~~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 103 (204)
T 3e05_A 25 KQEVRAVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL 103 (204)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC
T ss_pred hHHHHHHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh
Confidence 3455677888887 88899999999999999999999998899999999 8899888764 67999999997632
Q ss_pred ---CCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 78 ---PNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 78 ---~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
+..|+|++..+++ +...+++++.+.|+|||++++..... .+.+
T Consensus 104 ~~~~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~ 149 (204)
T 3e05_A 104 DDLPDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL-----------------------------DTLT 149 (204)
T ss_dssp TTSCCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH-----------------------------HHHH
T ss_pred hcCCCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc-----------------------------ccHH
Confidence 2349999988776 22378999999999999999965321 1357
Q ss_pred HHHHHHHHcCCceeEE
Q 030025 155 EFTTLATEAGFSGIRF 170 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~ 170 (184)
++.++++++|| .++.
T Consensus 150 ~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 150 KAVEFLEDHGY-MVEV 164 (204)
T ss_dssp HHHHHHHHTTC-EEEE
T ss_pred HHHHHHHHCCC-ceeE
Confidence 78889999999 4443
No 89
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.78 E-value=3.3e-18 Score=122.24 Aligned_cols=143 Identities=8% Similarity=0.039 Sum_probs=106.9
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCC-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPN- 79 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~- 79 (184)
....++..++ +. +|||+|||+|.++..+++. ..+++++|. +.+++.++++ .++.+..+|+.+ +++.
T Consensus 20 ~l~~~~~~~~---~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 93 (202)
T 2kw5_A 20 FLVSVANQIP---QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVAD 93 (202)
T ss_dssp SHHHHHHHSC---SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTT
T ss_pred HHHHHHHhCC---CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcC
Confidence 4455555544 44 9999999999999999887 569999999 8898888764 379999999987 5543
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHH
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTT 158 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (184)
. |+|++. +.|++.++...+++++.++|+|||.+++.++........ ... .......++.+++.+
T Consensus 94 ~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~---------~~~----~~~~~~~~~~~~l~~ 158 (202)
T 2kw5_A 94 AWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN---------TGG----PKDLDLLPKLETLQS 158 (202)
T ss_dssp TCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT---------SCC----SSSGGGCCCHHHHHH
T ss_pred CccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC---------CCC----CCcceeecCHHHHHH
Confidence 3 999984 356666667799999999999999999988765432100 000 001123579999999
Q ss_pred HHHHcCCceeEEEee
Q 030025 159 LATEAGFSGIRFVCF 173 (184)
Q Consensus 159 ~l~~aGf~~i~~~~~ 173 (184)
+|+ ||+++++...
T Consensus 159 ~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 159 ELP--SLNWLIANNL 171 (202)
T ss_dssp HCS--SSCEEEEEEE
T ss_pred Hhc--CceEEEEEEE
Confidence 999 9999987654
No 90
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.78 E-value=2.2e-18 Score=129.55 Aligned_cols=141 Identities=13% Similarity=0.148 Sum_probs=109.3
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCCC-C
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPNG-D 81 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~~-D 81 (184)
..+++.++ ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.+.. |
T Consensus 110 ~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD 186 (286)
T 3m70_A 110 GDVVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYD 186 (286)
T ss_dssp HHHHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEE
T ss_pred HHHHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCcc
Confidence 45556665 557899999999999999999988 569999999 8898887764 279999999988 44444 9
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHH
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLAT 161 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (184)
+|++..++||+++++...+++++.+.|+|||.+++...........+ ......++.+++.++++
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~ 250 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP----------------LPFSFTFAENELKEYYK 250 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS----------------SCCSCCBCTTHHHHHTT
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC----------------CCccccCCHHHHHHHhc
Confidence 99999999999888778999999999999999888765443321110 01123457888988886
Q ss_pred HcCCceeEEE
Q 030025 162 EAGFSGIRFV 171 (184)
Q Consensus 162 ~aGf~~i~~~ 171 (184)
. |+.+...
T Consensus 251 ~--~~~~~~~ 258 (286)
T 3m70_A 251 D--WEFLEYN 258 (286)
T ss_dssp T--SEEEEEE
T ss_pred C--CEEEEEE
Confidence 4 8887764
No 91
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.78 E-value=2.1e-19 Score=135.37 Aligned_cols=150 Identities=12% Similarity=0.117 Sum_probs=102.7
Q ss_pred HHHHHHHhcC-CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----C------------------
Q 030025 9 LQKILEAYKG-FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----P------------------ 64 (184)
Q Consensus 9 ~~~l~~~~~~-~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~------------------ 64 (184)
...+.+.+.. ..+..+|||||||+|.++. ++...+..+++++|+ +.|++.|+++ +
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGK 136 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCS
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCc
Confidence 4556666641 1266899999999999554 333334569999999 8899876542 0
Q ss_pred --------------CceEEEcccCc--c-----CCC--CCEEEechhhhcCCh--HHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 65 --------------GVKHVGGDMFQ--S-----VPN--GDAILIKWILHDWSD--EHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 65 --------------~i~~~~~d~~~--~-----~~~--~D~i~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+.++..|+.+ + ++. .|+|++..++||+.+ ++...+|++++++|||||+|++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 137 GECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp CCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 03466668876 2 222 399999999999543 2556899999999999999999864
Q ss_pred ecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEEee
Q 030025 120 VLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
..... .. ..+ .......++.++|.++|+++||+.+++...
T Consensus 217 ~~~~~--------~~-~~~-----~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 217 LEESW--------YL-AGE-----ARLTVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp ESCCE--------EE-ETT-----EEEECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCcce--------EE-cCC-----eeeeeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 43211 00 000 000123468999999999999999887654
No 92
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.77 E-value=6.8e-18 Score=119.36 Aligned_cols=144 Identities=14% Similarity=0.217 Sum_probs=114.7
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CC--ceEEEcccCccC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PG--VKHVGGDMFQSV 77 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~--i~~~~~d~~~~~ 77 (184)
...+.+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.++++ ++ +.+..+|+.+..
T Consensus 39 ~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 56778888887 778899999999999999999988 679999999 8888887653 33 999999998844
Q ss_pred CC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHH
Q 030025 78 PN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHE 155 (184)
Q Consensus 78 ~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (184)
+. . |+|++..++|+ ..+....+++++.++|+|||++++..+... ...+
T Consensus 116 ~~~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~ 165 (194)
T 1dus_A 116 KDRKYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ-----------------------------GAKS 165 (194)
T ss_dssp TTSCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH-----------------------------HHHH
T ss_pred ccCCceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCC-----------------------------ChHH
Confidence 43 3 99999888775 334556899999999999999999775321 1345
Q ss_pred HHHHHHHcCCceeEEEeecCceEEEEEeC
Q 030025 156 FTTLATEAGFSGIRFVCFFHNLWVMEFYK 184 (184)
Q Consensus 156 ~~~~l~~aGf~~i~~~~~~~~~~~~~~~~ 184 (184)
+.+.+++. |..+++.....+.+++.+.|
T Consensus 166 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 166 LAKYMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHHHHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHHHHHHH-hcceEEEecCCcEEEEEEee
Confidence 67777777 77788887777888877765
No 93
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.77 E-value=3.6e-18 Score=122.84 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=104.0
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCC-eEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC--CEE
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHI-KGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG--DAI 83 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~--D~i 83 (184)
..++..+. ++..+|||+|||+|.++..+ .. +++++|. +.+++.++++ +++.++.+|+.+ +++.. |+|
T Consensus 27 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v 99 (211)
T 2gs9_A 27 ERALKGLL--PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVV 99 (211)
T ss_dssp HHHHHTTC--CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEE
T ss_pred HHHHHHhc--CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEE
Confidence 34555554 37789999999999999876 34 8999999 8899888765 789999999987 65543 999
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhh--hCCCccccCHHHHHHHHH
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMT--QYPGGKERTKHEFTTLAT 161 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 161 (184)
++..++||+++.. .+++++.++|||||.+++.++..... +........... .....+.++.+++.++|+
T Consensus 100 ~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 100 LLFTTLEFVEDVE--RVLLEARRVLRPGGALVVGVLEALSP-------WAALYRRLGEKGVLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp EEESCTTTCSCHH--HHHHHHHHHEEEEEEEEEEEECTTSH-------HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC
T ss_pred EEcChhhhcCCHH--HHHHHHHHHcCCCCEEEEEecCCcCc-------HHHHHHHHhhccCccccccccCCHHHHHHHhc
Confidence 9999999998654 78999999999999999988754321 000000000000 001234679999999999
Q ss_pred HcCCceeEEEe
Q 030025 162 EAGFSGIRFVC 172 (184)
Q Consensus 162 ~aGf~~i~~~~ 172 (184)
| .++...
T Consensus 171 --G--~~~~~~ 177 (211)
T 2gs9_A 171 --P--PEAEGE 177 (211)
T ss_dssp --S--CSEEEE
T ss_pred --C--cceeEE
Confidence 8 444443
No 94
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.77 E-value=4e-18 Score=126.36 Aligned_cols=158 Identities=18% Similarity=0.237 Sum_probs=111.6
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCc--ChHHHHHHh-hCCCCeEEEeec-hhHhhhCCCC------CCceEEEccc
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSL--GNTLKAITS-KYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDM 73 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~--G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~ 73 (184)
.++.+...++..+..-....+|||||||+ +.++..+++ ..|..+++++|. +.|++.|+++ .++.|+++|+
T Consensus 61 ~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~ 140 (277)
T 3giw_A 61 ANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCT
T ss_pred HHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecc
Confidence 34566677777776123568999999997 444555554 579999999999 9999999764 2589999999
Q ss_pred Ccc---CC-----C-CC-----EEEechhhhcCChHH-HHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhh
Q 030025 74 FQS---VP-----N-GD-----AILIKWILHDWSDEH-CLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLAD 138 (184)
Q Consensus 74 ~~~---~~-----~-~D-----~i~~~~~l~~~~~~~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 138 (184)
.++ +. . .| .|+++.+|||+++++ ...+++++++.|+|||+|++++...+... ........
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p-----~~~~~~~~ 215 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP-----QEVGRVAR 215 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH-----HHHHHHHH
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH-----HHHHHHHH
Confidence 873 11 1 14 688999999999864 36899999999999999999886643210 01111222
Q ss_pred hHhhhhCCCccccCHHHHHHHHHHcCCceeE
Q 030025 139 VLVMTQYPGGKERTKHEFTTLATEAGFSGIR 169 (184)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~ 169 (184)
.+.... .....++.+++..+|. ||+.++
T Consensus 216 ~~~~~g-~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 216 EYAARN-MPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHTT-CCCCCCCHHHHHHTTT--TSEECT
T ss_pred HHHhcC-CCCccCCHHHHHHHhC--CCcccC
Confidence 222221 1345689999999995 999664
No 95
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.77 E-value=1e-17 Score=122.30 Aligned_cols=151 Identities=16% Similarity=0.155 Sum_probs=105.6
Q ss_pred HhHHHH---HHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhC----CCCCCceEEEcccCc---
Q 030025 7 LVLQKI---LEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHS----PEYPGVKHVGGDMFQ--- 75 (184)
Q Consensus 7 ~~~~~l---~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a----~~~~~i~~~~~d~~~--- 75 (184)
.+...+ ++.++ +.+..+|||+|||+|.++..+++..+..+++++|. +.+++.+ +..+++.++.+|+.+
T Consensus 58 ~~~~~i~~~l~~~~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~ 136 (230)
T 1fbn_A 58 KLAAAIIKGLKVMP-IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE 136 (230)
T ss_dssp HHHHHHHTTCCCCC-CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG
T ss_pred HHHHHHHhcccccC-CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc
Confidence 334566 44555 67888999999999999999999987789999999 8787654 334789999999976
Q ss_pred --cCCCC-CEEEechhhhcCChH-HHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcccc
Q 030025 76 --SVPNG-DAILIKWILHDWSDE-HCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKER 151 (184)
Q Consensus 76 --~~~~~-D~i~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (184)
+++.. |+|+ |+++++ ....+++++.+.|+|||++++. .......... .....
T Consensus 137 ~~~~~~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~------------------~~~~~ 192 (230)
T 1fbn_A 137 YANIVEKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTK------------------DPKEI 192 (230)
T ss_dssp GTTTSCCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSS------------------CHHHH
T ss_pred ccccCccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCC------------------CHHHh
Confidence 22233 9988 444433 3346799999999999999997 2211110000 00011
Q ss_pred CHHHHHHHHHHcCCceeEEEeecCc---eEEEEEe
Q 030025 152 TKHEFTTLATEAGFSGIRFVCFFHN---LWVMEFY 183 (184)
Q Consensus 152 ~~~~~~~~l~~aGf~~i~~~~~~~~---~~~~~~~ 183 (184)
..+++. +++++||+.++.....+. ..++.+.
T Consensus 193 ~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 193 FKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp HHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred hHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 346777 899999999988876543 5555554
No 96
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.77 E-value=8e-18 Score=117.73 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=102.3
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------C-CceEEEcccCcc
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------P-GVKHVGGDMFQS 76 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~-~i~~~~~d~~~~ 76 (184)
...+...+++.+. ..+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.++++ + ++ ++.+|..+.
T Consensus 10 ~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 10 KQHVRALAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG
T ss_pred HHHHHHHHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh
Confidence 3456777888887 78888999999999999999999998899999999 8888888753 3 67 888888663
Q ss_pred CC---C-CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccC
Q 030025 77 VP---N-GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERT 152 (184)
Q Consensus 77 ~~---~-~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (184)
++ . .|+|++..++++ ..+++++.+.|+|||++++.+...+ +
T Consensus 88 ~~~~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~ 132 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVTVE-----------------------------S 132 (178)
T ss_dssp GGGCCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECSHH-----------------------------H
T ss_pred hhccCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeeccc-----------------------------c
Confidence 32 2 399999999987 2689999999999999998664221 2
Q ss_pred HHHHHHHHHHcCCceeEE
Q 030025 153 KHEFTTLATEAGFSGIRF 170 (184)
Q Consensus 153 ~~~~~~~l~~aGf~~i~~ 170 (184)
...+.+++++.|++..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 133 EQMLWALRKQFGGTISSF 150 (178)
T ss_dssp HHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHHcCCeeEEE
Confidence 456677888888876654
No 97
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.76 E-value=4.6e-18 Score=121.84 Aligned_cols=130 Identities=14% Similarity=0.044 Sum_probs=105.6
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccCCCC-CEEEechhhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSVPNG-DAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~~~~-D~i~~~~~l~ 90 (184)
..+..+|||+|||+|.++..+++. +..+++++|. +.+++.++++ .++++..+|+.+..+.. |+|++..+++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 356789999999999999998764 5679999999 8898888764 34999999998744444 9999988887
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRF 170 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~ 170 (184)
++ ..+++++.++|+|||++++.+.... +.+++.++++++||+.++.
T Consensus 137 ~~-----~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 137 IL-----LDLIPQLDSHLNEDGQVIFSGIDYL-----------------------------QLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp HH-----HHHGGGSGGGEEEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTEEEEEE
T ss_pred HH-----HHHHHHHHHhcCCCCEEEEEecCcc-----------------------------cHHHHHHHHHHcCCceEEe
Confidence 63 4789999999999999999664321 3678889999999999998
Q ss_pred EeecCceEEEEEe
Q 030025 171 VCFFHNLWVMEFY 183 (184)
Q Consensus 171 ~~~~~~~~~~~~~ 183 (184)
........++.-.
T Consensus 183 ~~~~~w~~~~~~~ 195 (205)
T 3grz_A 183 MRAGRWIGLAISR 195 (205)
T ss_dssp EEETTEEEEEEEE
T ss_pred eccCCEEEEEEec
Confidence 8877777776544
No 98
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.76 E-value=4.5e-19 Score=130.03 Aligned_cols=148 Identities=14% Similarity=0.073 Sum_probs=101.0
Q ss_pred cccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-
Q 030025 3 NHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ- 75 (184)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~- 75 (184)
.+...+...+.+.+. .+.++|||||||+|..+..+++..+ .+++++|+ +.+++.|+++ .++.++.+|..+
T Consensus 44 ~we~~~m~~~a~~~~--~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 44 RWETPYMHALAAAAS--SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp GGGHHHHHHHHHHHT--TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHhhc--cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh
Confidence 344455566666654 6778999999999999999988765 48999999 9999988763 567888888764
Q ss_pred --cCCCC--CEEEe-----chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCC
Q 030025 76 --SVPNG--DAILI-----KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYP 146 (184)
Q Consensus 76 --~~~~~--D~i~~-----~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (184)
+++.. |.|++ ...++|+.+. ..++++++|+|||||+|++.+......... .. ..
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~~~~--~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~-------~~--------~~ 183 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHTHQF--NFIKNHAFRLLKPGGVLTYCNLTSWGELMK-------SK--------YS 183 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTTHHH--HHHHHTHHHHEEEEEEEEECCHHHHHHHTT-------TT--------CS
T ss_pred cccccccCCceEEEeeeecccchhhhcch--hhhhhhhhheeCCCCEEEEEecCCchhhhh-------hh--------hh
Confidence 34433 77753 5566666554 478999999999999998854321110000 00 00
Q ss_pred CccccCHHHHHHHHHHcCCceeEE
Q 030025 147 GGKERTKHEFTTLATEAGFSGIRF 170 (184)
Q Consensus 147 ~~~~~~~~~~~~~l~~aGf~~i~~ 170 (184)
.......+.+...|.++||+.+.+
T Consensus 184 ~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 184 DITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp CHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hhhhhhHHHHHHHHHHcCCeEEEE
Confidence 011123566777889999997654
No 99
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.75 E-value=2.9e-18 Score=123.70 Aligned_cols=107 Identities=15% Similarity=0.209 Sum_probs=88.4
Q ss_pred HHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCCCC-CEE
Q 030025 11 KILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVPNG-DAI 83 (184)
Q Consensus 11 ~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~~~-D~i 83 (184)
.+...++ ..+..+|||+|||+|.++..+++.. .+++++|+ +.+++.++++ ++++++.+|+.+ +.+.. |+|
T Consensus 42 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v 118 (216)
T 3ofk_A 42 LLRLSLS-SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLI 118 (216)
T ss_dssp HHHHHTT-TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEE
T ss_pred HHHHHcc-cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEE
Confidence 3444455 6677899999999999999999985 58999999 8888877653 579999999988 42333 999
Q ss_pred EechhhhcCChH-HHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 84 LIKWILHDWSDE-HCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 84 ~~~~~l~~~~~~-~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
++..++||++++ +...+++++.++|+|||++++.++.
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999999999864 4458899999999999999997754
No 100
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.74 E-value=3.3e-18 Score=122.93 Aligned_cols=141 Identities=14% Similarity=0.083 Sum_probs=94.8
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCC-----CceEEEcccCccCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYP-----GVKHVGGDMFQSVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-----~i~~~~~d~~~~~~ 78 (184)
+..++..+++.+....+..+|||+|||+|.++..+++..+..+++++|+ +.+++.++++. +++++.+|+.++++
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 93 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLI 93 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhh
Confidence 4556777888877237889999999999999999999998899999999 89999988751 58888999887433
Q ss_pred ------CC-CEEEechhhhc------CChHHH------------------HHHHHHHHhhCCCCcEEEEEeeecCCCCCC
Q 030025 79 ------NG-DAILIKWILHD------WSDEHC------------------LKLLKNCHKSIPEGGKVIVVESVLPELPEN 127 (184)
Q Consensus 79 ------~~-D~i~~~~~l~~------~~~~~~------------------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 127 (184)
.. |+|+++..+++ ++.... ..+++++.++|||||++++.+...
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------ 167 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH------ 167 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT------
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC------
Confidence 33 99999644433 222211 578999999999999955544211
Q ss_pred CccccchhhhhhHhhhhCCCccccCHHHHHHHHH--HcCCceeEEEeec
Q 030025 128 GTHSKINSLADVLVMTQYPGGKERTKHEFTTLAT--EAGFSGIRFVCFF 174 (184)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aGf~~i~~~~~~ 174 (184)
...+++.++++ ++||..+++....
T Consensus 168 -----------------------~~~~~~~~~l~~~~~gf~~~~~~~~~ 193 (215)
T 4dzr_A 168 -----------------------NQADEVARLFAPWRERGFRVRKVKDL 193 (215)
T ss_dssp -----------------------SCHHHHHHHTGGGGGGTEECCEEECT
T ss_pred -----------------------ccHHHHHHHHHHhhcCCceEEEEEec
Confidence 13577788889 9999988877654
No 101
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.74 E-value=6.5e-17 Score=121.06 Aligned_cols=147 Identities=14% Similarity=0.162 Sum_probs=111.1
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~ 77 (184)
+..++..+++.++ .+..+|||+|||+|..+..+++..|..+++++|+ +.+++.++++ ++++++.+|+.++.
T Consensus 95 te~l~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~ 172 (276)
T 2b3t_A 95 TECLVEQALARLP--EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL 172 (276)
T ss_dssp HHHHHHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG
T ss_pred HHHHHHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc
Confidence 3455666777664 4567999999999999999999999999999999 8899888764 47999999998854
Q ss_pred C-CC-CEEEech-------------hhhcCCh----------HHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCcccc
Q 030025 78 P-NG-DAILIKW-------------ILHDWSD----------EHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSK 132 (184)
Q Consensus 78 ~-~~-D~i~~~~-------------~l~~~~~----------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 132 (184)
+ .. |+|+++. +++|.+. .....+++++.+.|+|||++++...
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~------------- 239 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG------------- 239 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-------------
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-------------
Confidence 3 33 9999973 3333321 3446899999999999999998421
Q ss_pred chhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEEee-cCceEEEEEe
Q 030025 133 INSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFVCF-FHNLWVMEFY 183 (184)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~-~~~~~~~~~~ 183 (184)
..+.+++.++++++||+.+++..- .+...++.++
T Consensus 240 -----------------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 240 -----------------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp -----------------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred -----------------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 114678899999999998887764 3444444443
No 102
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.74 E-value=1.3e-17 Score=121.33 Aligned_cols=154 Identities=12% Similarity=0.043 Sum_probs=94.1
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeech-h-HhhhC---CCC------CCceEEEcccCc-cC
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLP-H-VIQHS---PEY------PGVKHVGGDMFQ-SV 77 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~-~-~~~~a---~~~------~~i~~~~~d~~~-~~ 77 (184)
..+.+.+. .+..+|||||||+|.++..++++.+..+++|+|++ . |++.| +++ +++.++.+|+.+ +.
T Consensus 15 ~~~~~~~~--~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 15 DELTEIIG--QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF 92 (225)
T ss_dssp HHHHHHHT--TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG
T ss_pred HHHHHHhC--CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh
Confidence 44555543 56789999999999999999988889999999983 4 54444 543 579999999987 32
Q ss_pred CCCCEEEechhhhcCChH------HHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcccc
Q 030025 78 PNGDAILIKWILHDWSDE------HCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKER 151 (184)
Q Consensus 78 ~~~D~i~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (184)
...|.|.+..+...++.. +...+|++++++|||||++++........ ... . .... ... .......
T Consensus 93 ~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~-~~~--~---~~~~--~~~-~~~~~~~ 163 (225)
T 3p2e_A 93 ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY-EEA--E---IKKR--GLP-LLSKAYF 163 (225)
T ss_dssp GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------------CCHHHH
T ss_pred hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc-hhc--h---hhhc--CCC-CCChhhc
Confidence 112444333332222110 01358999999999999999944322221 000 0 0000 000 0011111
Q ss_pred CHHHHHHHHHHcCCceeEEEeec
Q 030025 152 TKHEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 152 ~~~~~~~~l~~aGf~~i~~~~~~ 174 (184)
...++.++++++||++.+.....
T Consensus 164 ~~~el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 164 LSEQYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp HSHHHHHHHHHHTCEEEEEEEEC
T ss_pred chHHHHHHHHHcCCCeeeeeecC
Confidence 22359999999999988776553
No 103
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.73 E-value=9.8e-17 Score=115.07 Aligned_cols=127 Identities=17% Similarity=0.169 Sum_probs=101.0
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------C-CceEEEcccCccC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------P-GVKHVGGDMFQSV 77 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~-~i~~~~~d~~~~~ 77 (184)
..+...++..+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+++ + +++++.+|+.+.+
T Consensus 41 ~~~~~~~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 117 (204)
T 3njr_A 41 SPMRALTLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL 117 (204)
T ss_dssp HHHHHHHHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG
T ss_pred HHHHHHHHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc
Confidence 355667788887 888899999999999999999988 679999999 8999888764 4 7999999998732
Q ss_pred ---CCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 78 ---PNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 78 ---~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
+..|+|++...+ +. . +++++.+.|+|||++++..... .+..
T Consensus 118 ~~~~~~D~v~~~~~~----~~--~-~l~~~~~~LkpgG~lv~~~~~~-----------------------------~~~~ 161 (204)
T 3njr_A 118 ADLPLPEAVFIGGGG----SQ--A-LYDRLWEWLAPGTRIVANAVTL-----------------------------ESET 161 (204)
T ss_dssp TTSCCCSEEEECSCC----CH--H-HHHHHHHHSCTTCEEEEEECSH-----------------------------HHHH
T ss_pred ccCCCCCEEEECCcc----cH--H-HHHHHHHhcCCCcEEEEEecCc-----------------------------ccHH
Confidence 234999987644 22 3 8999999999999999965321 1356
Q ss_pred HHHHHHHHcCCceeEEE
Q 030025 155 EFTTLATEAGFSGIRFV 171 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~~ 171 (184)
++.+++++.||+..++.
T Consensus 162 ~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 162 LLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHhCCCcEEEEE
Confidence 77888999998877654
No 104
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=2.8e-18 Score=125.64 Aligned_cols=145 Identities=14% Similarity=0.158 Sum_probs=98.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc---
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ--- 75 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~--- 75 (184)
...+...+...+. .+..+|||||||+|.++..+++..+ .+++++|+ +.|++.|+++ .++.++.+|+.+
T Consensus 46 ~~~~~~~l~~~~~--~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~ 122 (236)
T 1zx0_A 46 ETPYMHALAAAAS--SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp GHHHHHHHHHHHT--TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG
T ss_pred HHHHHHHHHhhcC--CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhc
Confidence 3445555555543 5678999999999999999976543 48999999 8998888663 568999999876
Q ss_pred cCCCC--CEEEe-chh--hhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc
Q 030025 76 SVPNG--DAILI-KWI--LHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE 150 (184)
Q Consensus 76 ~~~~~--D~i~~-~~~--l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (184)
++++. |+|++ .+. .+.+.......++++++++|||||++++.+....... ... .......
T Consensus 123 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~----------~~~-----~~~~~~~ 187 (236)
T 1zx0_A 123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGEL----------MKS-----KYSDITI 187 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHH----------TTT-----TCSCHHH
T ss_pred ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHh----------hch-----hhhhhhh
Confidence 35443 99998 454 3333334445789999999999999998765321100 000 0001111
Q ss_pred cCHHHHHHHHHHcCCce
Q 030025 151 RTKHEFTTLATEAGFSG 167 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~ 167 (184)
...+.+.+.++++||+.
T Consensus 188 ~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 188 MFEETQVPALLEAGFRR 204 (236)
T ss_dssp HHHHHTHHHHHHTTCCG
T ss_pred hccHHHHHHHHHCCCCC
Confidence 23456667899999995
No 105
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.73 E-value=3.1e-17 Score=136.22 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=95.4
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCC------------CCCceEEEcc
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPE------------YPGVKHVGGD 72 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------------~~~i~~~~~d 72 (184)
...+.+++.+. ..+..+|||||||+|.++..+++.. +..+++++|+ +.|++.|++ .++++++++|
T Consensus 708 qRle~LLelL~-~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIR-ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHH-HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred HHHHHHHHHhc-ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 34566677776 5678999999999999999999987 5579999999 899988865 2579999999
Q ss_pred cCc-cCCCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 73 MFQ-SVPNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 73 ~~~-~~~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
+.+ +.+.. |+|++..++||++++....+++++.++|||| .+++..+..
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 988 55433 9999999999999988778999999999999 888877654
No 106
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.73 E-value=2e-17 Score=128.52 Aligned_cols=117 Identities=13% Similarity=0.200 Sum_probs=95.5
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC---------------CCCce
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE---------------YPGVK 67 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------------~~~i~ 67 (184)
.....+..+++.+. +.+..+|||||||+|..+..++...+..+++|+|+ +.+++.|++ ..+++
T Consensus 157 t~~~~i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVe 235 (438)
T 3uwp_A 157 TSFDLVAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 235 (438)
T ss_dssp THHHHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 34556888999998 99999999999999999999998876657999999 777777653 25799
Q ss_pred EEEcccCc-cCC----CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCC
Q 030025 68 HVGGDMFQ-SVP----NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPEL 124 (184)
Q Consensus 68 ~~~~d~~~-~~~----~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 124 (184)
++++|+.+ +++ ..|+|+++.+++ . ++....|+++++.|||||+|++.+...+..
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~F--~-pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFAF--G-PEVDHQLKERFANMKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTTC--C-HHHHHHHHHHHTTSCTTCEEEESSCSSCTT
T ss_pred EEECcccCCccccccCCccEEEEccccc--C-chHHHHHHHHHHcCCCCcEEEEeecccCCC
Confidence 99999998 543 349999977753 2 344577899999999999999999887654
No 107
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.73 E-value=3e-17 Score=119.41 Aligned_cols=144 Identities=11% Similarity=0.116 Sum_probs=101.1
Q ss_pred HhHHHHHH---HhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCC----CCCCceEEEcccCcc-
Q 030025 7 LVLQKILE---AYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSP----EYPGVKHVGGDMFQS- 76 (184)
Q Consensus 7 ~~~~~l~~---~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~----~~~~i~~~~~d~~~~- 76 (184)
.++..++. .++ +++..+|||+|||+|.++..+++. .|..+++++|. +.|++.++ +.+|+..+.+|..++
T Consensus 61 klaa~i~~gl~~l~-ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~ 139 (233)
T 4df3_A 61 KLAAALLKGLIELP-VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE 139 (233)
T ss_dssp HHHHHHHTTCSCCC-CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG
T ss_pred HHHHHHHhchhhcC-CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc
Confidence 44555554 444 789999999999999999999998 58899999999 88876553 457899999998762
Q ss_pred ---CC-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcccc
Q 030025 77 ---VP-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKER 151 (184)
Q Consensus 77 ---~~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (184)
.. .. |+|++. +.+.. +...+++++++.|||||++++.......... .+...
T Consensus 140 ~~~~~~~~vDvVf~d--~~~~~--~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~------------------~p~~~-- 195 (233)
T 4df3_A 140 KYRHLVEGVDGLYAD--VAQPE--QAAIVVRNARFFLRDGGYMLMAIKARSIDVT------------------TEPSE-- 195 (233)
T ss_dssp GGTTTCCCEEEEEEC--CCCTT--HHHHHHHHHHHHEEEEEEEEEEEECCHHHHH------------------TCCCH--
T ss_pred ccccccceEEEEEEe--ccCCh--hHHHHHHHHHHhccCCCEEEEEEecccCCCC------------------CChHH--
Confidence 11 22 877753 33323 3347899999999999999997533211000 00001
Q ss_pred CHHHHHHHHHHcCCceeEEEeecC
Q 030025 152 TKHEFTTLATEAGFSGIRFVCFFH 175 (184)
Q Consensus 152 ~~~~~~~~l~~aGf~~i~~~~~~~ 175 (184)
..++..+.|+++||+.++.....+
T Consensus 196 ~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 196 VYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEEccCC
Confidence 123445678999999999887643
No 108
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.72 E-value=9.3e-18 Score=127.19 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=99.0
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----C--------CceEEEcccCc---------cCC
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----P--------GVKHVGGDMFQ---------SVP 78 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~--------~i~~~~~d~~~---------~~~ 78 (184)
+..+|||||||+|..+..++... ..+++|+|+ +.|++.|+++ . +++|.+.|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46899999999998766665543 468999999 9999998864 1 25677888721 233
Q ss_pred C-C-CEEEechhhhcC-ChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCC----------C--ccccchhhh-----h
Q 030025 79 N-G-DAILIKWILHDW-SDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPEN----------G--THSKINSLA-----D 138 (184)
Q Consensus 79 ~-~-D~i~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~----------~--~~~~~~~~~-----~ 138 (184)
. . |+|+|..++|++ .+++...++++++++|||||++++..+........ + ......... .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 3 3 999999999984 33344689999999999999999988743211000 0 000000000 0
Q ss_pred h--H-hhh-hCCCc-cccCHHHHHHHHHHcCCceeEEEe
Q 030025 139 V--L-VMT-QYPGG-KERTKHEFTTLATEAGFSGIRFVC 172 (184)
Q Consensus 139 ~--~-~~~-~~~~~-~~~~~~~~~~~l~~aGf~~i~~~~ 172 (184)
+ + ... ..... ...+..++.++++++||+.++...
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 0 0 000 00001 245789999999999999988754
No 109
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.72 E-value=1e-16 Score=115.50 Aligned_cols=136 Identities=11% Similarity=0.084 Sum_probs=95.1
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhH----hhhCCCCCCceEEEcccCcc-----CCCC-CEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHV----IQHSPEYPGVKHVGGDMFQS-----VPNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~----~~~a~~~~~i~~~~~d~~~~-----~~~~-D~i~~~~ 87 (184)
+++..+|||+|||+|.++..+++..+..+++++|+ +.| .+.+++.+++.++.+|+.++ ++.. |+|++..
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 134 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI 134 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec
Confidence 56788999999999999999999887779999999 654 45555557899999998762 2333 9999873
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH----HHHHHHc
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF----TTLATEA 163 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~a 163 (184)
.+ +.+...++++++++|||||++++.....+.. . ..+.+++ .+.++++
T Consensus 135 -~~---~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~--------------------~----~~~~~~~~~~~~~~l~~~ 186 (210)
T 1nt2_A 135 -AQ---KNQIEILKANAEFFLKEKGEVVIMVKARSID--------------------S----TAEPEEVFKSVLKEMEGD 186 (210)
T ss_dssp -CS---TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC--------------------T----TSCHHHHHHHHHHHHHTT
T ss_pred -cC---hhHHHHHHHHHHHHhCCCCEEEEEEecCCcc--------------------c----cCCHHHHHHHHHHHHHhh
Confidence 22 1233356999999999999999974321100 0 0123332 1337888
Q ss_pred CCceeEEEeec---CceEEEEEe
Q 030025 164 GFSGIRFVCFF---HNLWVMEFY 183 (184)
Q Consensus 164 Gf~~i~~~~~~---~~~~~~~~~ 183 (184)
|+.++..... ....++.+.
T Consensus 187 -f~~~~~~~~~p~~~~h~~~~~~ 208 (210)
T 1nt2_A 187 -FKIVKHGSLMPYHRDHIFIHAY 208 (210)
T ss_dssp -SEEEEEEECTTTCTTEEEEEEE
T ss_pred -cEEeeeecCCCCCCCcEEEEEE
Confidence 9999988773 345555554
No 110
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.72 E-value=2.1e-17 Score=122.41 Aligned_cols=109 Identities=11% Similarity=0.080 Sum_probs=86.9
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c------CC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S------VP 78 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~------~~ 78 (184)
..+..+++.++ ..+..+|||||||+|.++..++++ ..+++++|. +.|++.++++..-.++..++.+ + .+
T Consensus 32 ~~~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 32 SDRENDIFLEN-IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp CHHHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT
T ss_pred HHHHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccC
Confidence 45677888888 888999999999999999999987 468999999 8999988765211123333332 1 12
Q ss_pred CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 79 NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.. |+|++..++||+..++...+++++.++| |||+++++..
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 23 9999999999998888788999999999 9999999754
No 111
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.71 E-value=1.5e-16 Score=115.86 Aligned_cols=157 Identities=11% Similarity=0.106 Sum_probs=104.8
Q ss_pred cccHHhHHHHHHHhcC--CCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHh----hhCCCCCCceEEEcccC
Q 030025 3 NHTTLVLQKILEAYKG--FEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVI----QHSPEYPGVKHVGGDMF 74 (184)
Q Consensus 3 ~~~~~~~~~l~~~~~~--~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~----~~a~~~~~i~~~~~d~~ 74 (184)
.+.+.+...++..+.. +.+..+|||+|||+|.++..+++. .+..+++++|. +.|+ +.++++.|+.++.+|+.
T Consensus 56 ~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~ 135 (232)
T 3id6_C 56 AFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADAR 135 (232)
T ss_dssp TTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTT
T ss_pred hHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccc
Confidence 3455667777776542 678899999999999999999987 46789999999 7663 44555689999999997
Q ss_pred ccC-----CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCc
Q 030025 75 QSV-----PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGG 148 (184)
Q Consensus 75 ~~~-----~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (184)
.+. ... |+|++..+. ++ ....+.+.+.+.|||||+|++............ ..
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~---~~-~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~------------------~~ 193 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQ---PD-QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKD------------------PK 193 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCC---TT-HHHHHHHHHHHHEEEEEEEEEEEC-------CC------------------SS
T ss_pred cchhhhccccceEEEEecCCC---hh-HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCC------------------HH
Confidence 621 223 999987553 22 222345666779999999999742211000000 00
Q ss_pred cccCHHHHHHHHHHcCCceeEEEeecC---ceEEEEEe
Q 030025 149 KERTKHEFTTLATEAGFSGIRFVCFFH---NLWVMEFY 183 (184)
Q Consensus 149 ~~~~~~~~~~~l~~aGf~~i~~~~~~~---~~~~~~~~ 183 (184)
...++..+.|+++||+.++.....+ .+.++.+.
T Consensus 194 --e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 194 --EIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp --SSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEE
T ss_pred --HHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEE
Confidence 0123455677889999999888743 35555443
No 112
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.70 E-value=3.2e-17 Score=124.75 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=87.6
Q ss_pred hHHHHHHHhcC-CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------------CCceEEEcc
Q 030025 8 VLQKILEAYKG-FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------------PGVKHVGGD 72 (184)
Q Consensus 8 ~~~~l~~~~~~-~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------------~~i~~~~~d 72 (184)
+.+.+++.+.. .++..+|||+|||+|..+..+++. +..+++++|+ +.|++.++++ .++.++++|
T Consensus 20 l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 20 LIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 44455555441 236789999999999999998874 5679999999 8898887653 268999999
Q ss_pred cCc-c----CC--C-C-CEEEechhhhcC-C-hHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 73 MFQ-S----VP--N-G-DAILIKWILHDW-S-DEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 73 ~~~-~----~~--~-~-D~i~~~~~l~~~-~-~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+.+ + ++ . . |+|++..++|++ . .++...++++++++|+|||.+++..+.
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 987 4 32 2 3 999999999997 3 345568999999999999999998764
No 113
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=8.6e-17 Score=113.34 Aligned_cols=110 Identities=11% Similarity=0.113 Sum_probs=81.6
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc--cC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ--SV 77 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~--~~ 77 (184)
.+...++... +++..+|||+|||+|..+..++++ ..+++++|+ +.|++.|+++ ++++++..|... .+
T Consensus 10 ~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~ 85 (185)
T 3mti_A 10 HMSHDFLAEV--LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY 85 (185)
T ss_dssp HHHHHHHHTT--CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT
T ss_pred HHHHHHHHHh--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh
Confidence 3445555542 567899999999999999999988 689999999 9999988764 678999877765 23
Q ss_pred -CCC-CEEEechhhhcC-------ChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 78 -PNG-DAILIKWILHDW-------SDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 78 -~~~-D~i~~~~~l~~~-------~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+.. |+|++.....+. ..+....+++++.+.|||||++++....
T Consensus 86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 333 999876322221 2244567899999999999999997643
No 114
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=1.4e-16 Score=114.96 Aligned_cols=98 Identities=18% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c--CCCC--CEEEechh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S--VPNG--DAILIKWI 88 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~--~~~~--D~i~~~~~ 88 (184)
+..+|||||||+|.++..+++.+|..+++++|+ +.+++.|+++ +++.++.+|+.+ + ++.. |+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 467999999999999999999999999999999 8898888663 589999999987 3 4433 99998865
Q ss_pred hhcCChH------HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 89 LHDWSDE------HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 89 l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
..+.... ....+++++.++|+|||.+++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 4332210 11368999999999999999854
No 115
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.70 E-value=9.7e-17 Score=113.19 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=102.1
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ 75 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~ 75 (184)
....+...+++.+. ..+..+|||+|||+|..+..+++.. .+++++|. +.+++.++++ +++.+..+|+.+
T Consensus 17 ~~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred ChHHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 35567777888887 8888999999999999999999886 79999999 8888887653 578999999876
Q ss_pred cCC--CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccC
Q 030025 76 SVP--NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERT 152 (184)
Q Consensus 76 ~~~--~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (184)
.++ .. |+|++..+++++ ..+++++.++|+|||.+++..... .+
T Consensus 94 ~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~~~-----------------------------~~ 139 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAILL-----------------------------ET 139 (192)
T ss_dssp HHTTSCCEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEECBH-----------------------------HH
T ss_pred hcccCCCCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEecCc-----------------------------ch
Confidence 333 23 999998887653 478999999999999999965321 13
Q ss_pred HHHHHHHHHHcCCce
Q 030025 153 KHEFTTLATEAGFSG 167 (184)
Q Consensus 153 ~~~~~~~l~~aGf~~ 167 (184)
..++.+.+++.||..
T Consensus 140 ~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 140 KFEAMECLRDLGFDV 154 (192)
T ss_dssp HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHCCCce
Confidence 567788999999943
No 116
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=2.3e-16 Score=114.83 Aligned_cols=126 Identities=14% Similarity=0.093 Sum_probs=95.4
Q ss_pred CCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc--cCCC-C-CEEEech
Q 030025 19 FEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ--SVPN-G-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~--~~~~-~-D~i~~~~ 87 (184)
+++..+|||+||| +|.++..+++.. ..+++++|+ +.+++.++++ .+++++.+|+.. +++. . |+|+++.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 5678999999999 999999999986 679999999 8999888764 369999999643 4443 3 9999987
Q ss_pred hhhcCChHH-----------------HHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc
Q 030025 88 ILHDWSDEH-----------------CLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE 150 (184)
Q Consensus 88 ~l~~~~~~~-----------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (184)
.+++.++.+ ...+++++.++|+|||++++..+.. .
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------------~ 183 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK----------------------------E 183 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC----------------------------H
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc----------------------------H
Confidence 766543311 2578999999999999999954221 0
Q ss_pred cCHHHHHHHHHHcCCceeEEEee
Q 030025 151 RTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
...+++.++++++||+...+...
T Consensus 184 ~~~~~~~~~l~~~g~~~~~~~~~ 206 (230)
T 3evz_A 184 KLLNVIKERGIKLGYSVKDIKFK 206 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred hHHHHHHHHHHHcCCceEEEEec
Confidence 13578889999999987666544
No 117
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.69 E-value=7.2e-16 Score=112.05 Aligned_cols=152 Identities=15% Similarity=0.135 Sum_probs=102.8
Q ss_pred HhHHHH---HHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhh----CCCCCCceEEEcccCcc-
Q 030025 7 LVLQKI---LEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQH----SPEYPGVKHVGGDMFQS- 76 (184)
Q Consensus 7 ~~~~~l---~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~----a~~~~~i~~~~~d~~~~- 76 (184)
.+...+ ++.++ +.+..+|||+|||+|.++..+++.. +..+++++|. +.+++. +++.+++.++.+|+.+.
T Consensus 57 ~~~~~i~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 135 (227)
T 1g8a_A 57 KLGAAIMNGLKNFP-IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE 135 (227)
T ss_dssp HHHHHHHTTCCCCC-CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG
T ss_pred hHHHHHHhhHHhcC-CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc
Confidence 344555 33444 6678899999999999999999884 5679999999 755544 44457899999999862
Q ss_pred ----CCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCcccc
Q 030025 77 ----VPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKER 151 (184)
Q Consensus 77 ----~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (184)
.+.. |+|++... .......+++++.++|||||++++. .......... .....
T Consensus 136 ~~~~~~~~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~------------------~~~~~ 192 (227)
T 1g8a_A 136 EYRALVPKVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA-VKSRSIDVTK------------------EPEQV 192 (227)
T ss_dssp GGTTTCCCEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCTTS------------------CHHHH
T ss_pred hhhcccCCceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE-EecCCCCCCC------------------Chhhh
Confidence 2333 99997554 2223335699999999999999997 2221110000 01122
Q ss_pred CHHHHHHHHHHcCCceeEEEeecCc---eEEEEEeC
Q 030025 152 TKHEFTTLATEAGFSGIRFVCFFHN---LWVMEFYK 184 (184)
Q Consensus 152 ~~~~~~~~l~~aGf~~i~~~~~~~~---~~~~~~~~ 184 (184)
+.+++.++ +++ |+.++.....+. ..++.+.|
T Consensus 193 ~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 193 FREVEREL-SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp HHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred hHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 46777777 777 999988876544 55555543
No 118
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.68 E-value=3e-17 Score=119.45 Aligned_cols=125 Identities=9% Similarity=0.093 Sum_probs=96.2
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc--cCC-C-C
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ--SVP-N-G 80 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~--~~~-~-~ 80 (184)
.+...++..+. ++..+|||+|||+|.++..+++. ..+++++|+ +.+++.++++ ++++++++|+.+ +++ . .
T Consensus 36 ~l~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (226)
T 3m33_A 36 LTFDLWLSRLL--TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAP 111 (226)
T ss_dssp HHHHHHHHHHC--CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCC
T ss_pred HHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCC
Confidence 44555555543 56789999999999999999998 569999999 8999888764 789999999965 444 3 3
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++.. +. ..+++++.++|||||+++. . +...+..++.++
T Consensus 112 fD~v~~~~------~~--~~~l~~~~~~LkpgG~l~~--~----------------------------~~~~~~~~~~~~ 153 (226)
T 3m33_A 112 FGLIVSRR------GP--TSVILRLPELAAPDAHFLY--V----------------------------GPRLNVPEVPER 153 (226)
T ss_dssp EEEEEEES------CC--SGGGGGHHHHEEEEEEEEE--E----------------------------ESSSCCTHHHHH
T ss_pred EEEEEeCC------CH--HHHHHHHHHHcCCCcEEEE--e----------------------------CCcCCHHHHHHH
Confidence 9999871 11 2679999999999999991 0 011245678899
Q ss_pred HHHcCCceeEEEee
Q 030025 160 ATEAGFSGIRFVCF 173 (184)
Q Consensus 160 l~~aGf~~i~~~~~ 173 (184)
++++||+.+++...
T Consensus 154 l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 154 LAAVGWDIVAEDHV 167 (226)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHCCCeEEEEEee
Confidence 99999998876543
No 119
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.68 E-value=2e-16 Score=116.91 Aligned_cols=129 Identities=12% Similarity=0.159 Sum_probs=103.6
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP 78 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~ 78 (184)
....++..+. ..+..+|||+|||+|.++..+++. .|..+++++|. +.+++.|+++ +++++..+|+.+.++
T Consensus 81 ~~~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (255)
T 3mb5_A 81 DAALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE 159 (255)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC
T ss_pred HHHHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC
Confidence 4556777777 888999999999999999999999 78899999999 8899888764 349999999988655
Q ss_pred CC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH
Q 030025 79 NG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF 156 (184)
Q Consensus 79 ~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (184)
.. |+|++ +.+++ ..+++++.+.|+|||++++..+.. ....++
T Consensus 160 ~~~~D~v~~-----~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~-----------------------------~~~~~~ 203 (255)
T 3mb5_A 160 EENVDHVIL-----DLPQP--ERVVEHAAKALKPGGFFVAYTPCS-----------------------------NQVMRL 203 (255)
T ss_dssp CCSEEEEEE-----CSSCG--GGGHHHHHHHEEEEEEEEEEESSH-----------------------------HHHHHH
T ss_pred CCCcCEEEE-----CCCCH--HHHHHHHHHHcCCCCEEEEEECCH-----------------------------HHHHHH
Confidence 43 99988 33433 368999999999999999965321 024667
Q ss_pred HHHHHHcC--CceeEEEee
Q 030025 157 TTLATEAG--FSGIRFVCF 173 (184)
Q Consensus 157 ~~~l~~aG--f~~i~~~~~ 173 (184)
.+.+++.| |..+++...
T Consensus 204 ~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 204 HEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp HHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHcCCCccccEEEEE
Confidence 78899999 998887654
No 120
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.68 E-value=3.3e-16 Score=115.94 Aligned_cols=125 Identities=14% Similarity=0.184 Sum_probs=98.6
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CC--ceEEEcccCccCCC--CCEEEechhhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PG--VKHVGGDMFQSVPN--GDAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~--i~~~~~d~~~~~~~--~D~i~~~~~l~ 90 (184)
+.+..+|||+|||+|.++..+++..+ +++++|+ +.+++.++++ ++ +++..+|+.+.++. .|+|+++...+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH
Confidence 35678999999999999999888754 9999999 8898888764 22 88999998774432 39999876555
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRF 170 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~ 170 (184)
+ ...+++++.+.|+|||++++.+.... +.+++.+.++++||+.++.
T Consensus 196 ~-----~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 196 L-----HAALAPRYREALVPGGRALLTGILKD-----------------------------RAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp H-----HHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTCEEEEE
T ss_pred H-----HHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------CHHHHHHHHHHCCCEEEEE
Confidence 3 34789999999999999999765321 3678899999999999988
Q ss_pred EeecCceEE
Q 030025 171 VCFFHNLWV 179 (184)
Q Consensus 171 ~~~~~~~~~ 179 (184)
........+
T Consensus 242 ~~~~~W~~l 250 (254)
T 2nxc_A 242 AAEGEWVLL 250 (254)
T ss_dssp EEETTEEEE
T ss_pred eccCCeEEE
Confidence 776554443
No 121
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.68 E-value=4.5e-16 Score=116.61 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=81.2
Q ss_pred HHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cCCCCCEEEe
Q 030025 14 EAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SVPNGDAILI 85 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~~~~D~i~~ 85 (184)
..+. ++++.+|||||||+|.++..++.+.++++++++|+ +.|++.|+++ ++++++++|+.+ +....|+|++
T Consensus 116 ~la~-l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~ 194 (298)
T 3fpf_A 116 ALGR-FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMV 194 (298)
T ss_dssp HHTT-CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEE
T ss_pred HHcC-CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEE
Confidence 3445 88999999999999988876666677899999999 9999999874 689999999987 4222399998
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
... .++. .++++++.+.|||||+|++.+
T Consensus 195 ~a~---~~d~--~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 195 AAL---AEPK--RRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CTT---CSCH--HHHHHHHHHHCCTTCEEEEEE
T ss_pred CCC---ccCH--HHHHHHHHHHcCCCcEEEEEc
Confidence 655 2333 479999999999999999976
No 122
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.68 E-value=1.7e-16 Score=114.54 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=77.5
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c--CCCC--CEEEechh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S--VPNG--DAILIKWI 88 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~--~~~~--D~i~~~~~ 88 (184)
+..+|||||||+|.++..+++.+|..+++++|+ +.+++.|+++ +++.++.+|+.+ + ++.. |.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 467899999999999999999999999999999 8898887653 579999999987 3 4443 99887654
Q ss_pred hhcCChH------HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 89 LHDWSDE------HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 89 l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
..+.... ....+++++.+.|+|||.+++..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 3222110 01368999999999999999864
No 123
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=114.62 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=84.6
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCCCC--CEEEechhhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVPNG--DAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~~~--D~i~~~~~l~ 90 (184)
+.+..+|||+|||+|.++..+++..+. +++++|+ +.+++.++++ +++.+..+|+.+ +++.. |+|++..+++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 357789999999999999999998644 8999999 8888877653 689999999987 55543 9999999998
Q ss_pred cCC-------------hHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 91 DWS-------------DEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 91 ~~~-------------~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
++. .++...+++++.++|+|||++++.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 765 345568999999999999999998754
No 124
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.67 E-value=1.8e-16 Score=116.33 Aligned_cols=121 Identities=13% Similarity=0.134 Sum_probs=93.9
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cC----CCC-CEEEe
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SV----PNG-DAILI 85 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~----~~~-D~i~~ 85 (184)
+++..+|||||||+|..+..++...+..+++++|. +.+++.+++. ++++++.+|+.+ +. ... |+|++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 35678999999999999999998888899999999 8888888663 479999999977 43 233 99998
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCC
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGF 165 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 165 (184)
..+ .+. ..+++.+.++|+|||++++...... . ....++.+.++++||
T Consensus 148 ~~~----~~~--~~~l~~~~~~LkpgG~l~~~~g~~~-------------~--------------~~~~~~~~~l~~~g~ 194 (240)
T 1xdz_A 148 RAV----ARL--SVLSELCLPLVKKNGLFVALKAASA-------------E--------------EELNAGKKAITTLGG 194 (240)
T ss_dssp ECC----SCH--HHHHHHHGGGEEEEEEEEEEECC-C-------------H--------------HHHHHHHHHHHHTTE
T ss_pred ecc----CCH--HHHHHHHHHhcCCCCEEEEEeCCCc-------------h--------------HHHHHHHHHHHHcCC
Confidence 763 332 4789999999999999998531100 0 023567788999999
Q ss_pred ceeEEEe
Q 030025 166 SGIRFVC 172 (184)
Q Consensus 166 ~~i~~~~ 172 (184)
+.++...
T Consensus 195 ~~~~~~~ 201 (240)
T 1xdz_A 195 ELENIHS 201 (240)
T ss_dssp EEEEEEE
T ss_pred eEeEEEE
Confidence 9887654
No 125
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.67 E-value=2.3e-16 Score=115.21 Aligned_cols=143 Identities=10% Similarity=0.049 Sum_probs=97.4
Q ss_pred HhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhH----hhhCCCCCCceEEEcccCcc--C---CCC-CE
Q 030025 15 AYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHV----IQHSPEYPGVKHVGGDMFQS--V---PNG-DA 82 (184)
Q Consensus 15 ~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~----~~~a~~~~~i~~~~~d~~~~--~---~~~-D~ 82 (184)
.+. +.+..+|||+|||+|.++..+++.+ +..+++++|+ +.+ ++.+++++++.++.+|+.+. + ... |+
T Consensus 72 ~~~-~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 72 QIH-IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCC-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred eec-CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEE
Confidence 444 6778899999999999999999986 6789999998 654 44555558899999999872 2 223 99
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHH
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATE 162 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (184)
|++... ..+....+++++.+.|||||++++.-........ . ........+ .++|++
T Consensus 151 V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~-~------------------~~~~~~~~~-~~~l~~ 206 (233)
T 2ipx_A 151 IFADVA----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDST-A------------------SAEAVFASE-VKKMQQ 206 (233)
T ss_dssp EEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSS-S------------------CHHHHHHHH-HHTTGG
T ss_pred EEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccC-C------------------CHHHHHHHH-HHHHHH
Confidence 998544 2223346789999999999999994322100000 0 000001223 588999
Q ss_pred cCCceeEEEeecCc---eEEEEE
Q 030025 163 AGFSGIRFVCFFHN---LWVMEF 182 (184)
Q Consensus 163 aGf~~i~~~~~~~~---~~~~~~ 182 (184)
+||+.++.....+. ..++.+
T Consensus 207 ~Gf~~~~~~~~~~~~~~~~~v~~ 229 (233)
T 2ipx_A 207 ENMKPQEQLTLEPYERDHAVVVG 229 (233)
T ss_dssp GTEEEEEEEECTTTSSSEEEEEE
T ss_pred CCCceEEEEecCCccCCcEEEEE
Confidence 99999987765432 444444
No 126
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.67 E-value=5.7e-17 Score=121.35 Aligned_cols=125 Identities=12% Similarity=0.113 Sum_probs=96.4
Q ss_pred HHHHHhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCCCC-
Q 030025 11 KILEAYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVPNG- 80 (184)
Q Consensus 11 ~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~~~- 80 (184)
.++..+. +.+..+|||+|||+|..+..+++. .|..+++++|. +.+++.++++ ++++++.+|+.++++..
T Consensus 101 ~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 101 YIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp -----CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 5666666 788899999999999999999998 77889999999 8888877543 47999999998855543
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
|+|++ ++++++ .+++++.+.|+|||++++.++.. ...+++.+.
T Consensus 180 fD~Vi~-----~~~~~~--~~l~~~~~~LkpgG~l~i~~~~~-----------------------------~~~~~~~~~ 223 (275)
T 1yb2_A 180 YDAVIA-----DIPDPW--NHVQKIASMMKPGSVATFYLPNF-----------------------------DQSEKTVLS 223 (275)
T ss_dssp EEEEEE-----CCSCGG--GSHHHHHHTEEEEEEEEEEESSH-----------------------------HHHHHHHHH
T ss_pred ccEEEE-----cCcCHH--HHHHHHHHHcCCCCEEEEEeCCH-----------------------------HHHHHHHHH
Confidence 99998 445443 78999999999999999976321 024566778
Q ss_pred HHHcCCceeEEEe
Q 030025 160 ATEAGFSGIRFVC 172 (184)
Q Consensus 160 l~~aGf~~i~~~~ 172 (184)
++++||+.++...
T Consensus 224 l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 224 LSASGMHHLETVE 236 (275)
T ss_dssp SGGGTEEEEEEEE
T ss_pred HHHCCCeEEEEEE
Confidence 8889999887765
No 127
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.67 E-value=6.4e-17 Score=117.17 Aligned_cols=98 Identities=10% Similarity=0.178 Sum_probs=78.1
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCcc----CCCC--CEEEech
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQS----VPNG--DAILIKW 87 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~----~~~~--D~i~~~~ 87 (184)
+..+|||||||+|.++..+++.+|+..++|+|+ +.+++.|+++ .++.++.+|+.+. ++.. |.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 467999999999999999999999999999999 8888877653 5799999998762 4443 9998875
Q ss_pred hhhcCChHHH------HHHHHHHHhhCCCCcEEEEEe
Q 030025 88 ILHDWSDEHC------LKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 88 ~l~~~~~~~~------~~~l~~~~~~L~pgG~l~i~~ 118 (184)
...+...... ..+++++.++|||||.+++..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 4433222111 148999999999999999965
No 128
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=6.7e-16 Score=108.11 Aligned_cols=127 Identities=12% Similarity=0.091 Sum_probs=101.0
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCcc
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQS 76 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~ 76 (184)
....+...+++.+. ..+..+|||+|||+|.++..+++ +..+++++|. +.+++.++++ ++++++.+|+.++
T Consensus 19 ~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~ 95 (183)
T 2yxd_A 19 TKEEIRAVSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDV 95 (183)
T ss_dssp CCHHHHHHHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHH
T ss_pred CHHHHHHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcccc
Confidence 34567788888887 78889999999999999999998 6789999999 8898888764 5799999999875
Q ss_pred CCC--CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 77 VPN--GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 77 ~~~--~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
++. .|+|++..+ + + ...+++++.+. |||.+++.+... .+..
T Consensus 96 ~~~~~~D~i~~~~~-~---~--~~~~l~~~~~~--~gG~l~~~~~~~-----------------------------~~~~ 138 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT-K---N--IEKIIEILDKK--KINHIVANTIVL-----------------------------ENAA 138 (183)
T ss_dssp GGGCCCSEEEECSC-S---C--HHHHHHHHHHT--TCCEEEEEESCH-----------------------------HHHH
T ss_pred ccCCCCcEEEECCc-c---c--HHHHHHHHhhC--CCCEEEEEeccc-----------------------------ccHH
Confidence 443 399999888 2 2 23789999998 999999966321 1246
Q ss_pred HHHHHHHHcCCceeEE
Q 030025 155 EFTTLATEAGFSGIRF 170 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~ 170 (184)
++.+.+++.||....+
T Consensus 139 ~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 139 KIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCeEEEE
Confidence 6788999999876544
No 129
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.66 E-value=1.8e-16 Score=112.78 Aligned_cols=102 Identities=16% Similarity=0.144 Sum_probs=81.4
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c-CC-CC-CEEEe
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S-VP-NG-DAILI 85 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~-~~-~~-D~i~~ 85 (184)
+++..+|||+|||+|..+..+++++ +..+++++|+ +.+++.++++ ++++++.+|+.+ + .. .. |+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 5778899999999999999999985 6679999999 8899888764 579999999876 2 32 33 99998
Q ss_pred chhhhc-------CChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 86 KWILHD-------WSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 86 ~~~l~~-------~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
...+.. ...++...+++++.++|+|||++++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 765511 12234457999999999999999997744
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.66 E-value=5.1e-16 Score=114.72 Aligned_cols=129 Identities=11% Similarity=0.136 Sum_probs=101.7
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SV 77 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~ 77 (184)
....++..+. +.+..+|||+|||+|.++..+++. .|..+++++|. +.+++.++++ +++.+..+|+.+ ++
T Consensus 84 ~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 84 DASAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL 162 (258)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC
T ss_pred HHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC
Confidence 3456777777 888999999999999999999998 67889999999 8888877653 579999999987 46
Q ss_pred CCC--CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHH
Q 030025 78 PNG--DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHE 155 (184)
Q Consensus 78 ~~~--D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (184)
+.. |+|++ +++++. .+++++.++|+|||++++.++..+ ...+
T Consensus 163 ~~~~~D~v~~-----~~~~~~--~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------~~~~ 206 (258)
T 2pwy_A 163 EEAAYDGVAL-----DLMEPW--KVLEKAALALKPDRFLVAYLPNIT-----------------------------QVLE 206 (258)
T ss_dssp CTTCEEEEEE-----ESSCGG--GGHHHHHHHEEEEEEEEEEESCHH-----------------------------HHHH
T ss_pred CCCCcCEEEE-----CCcCHH--HHHHHHHHhCCCCCEEEEEeCCHH-----------------------------HHHH
Confidence 543 99998 334432 689999999999999999763210 1356
Q ss_pred HHHHHHHcCCceeEEEee
Q 030025 156 FTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 156 ~~~~l~~aGf~~i~~~~~ 173 (184)
+.+.++++||..++....
T Consensus 207 ~~~~l~~~gf~~~~~~~~ 224 (258)
T 2pwy_A 207 LVRAAEAHPFRLERVLEV 224 (258)
T ss_dssp HHHHHTTTTEEEEEEEEE
T ss_pred HHHHHHHCCCceEEEEEe
Confidence 667788899998876653
No 131
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.65 E-value=1.5e-16 Score=118.70 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=80.3
Q ss_pred CCCeEEEecCCcCh----HHHHHHhhCC----CCeEEEeec-hhHhhhCCCC----------------------------
Q 030025 21 HIKQLVDVGGSLGN----TLKAITSKYP----HIKGINFDL-PHVIQHSPEY---------------------------- 63 (184)
Q Consensus 21 ~~~~ilDiG~G~G~----~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~---------------------------- 63 (184)
+..+|+|+|||||. ++..+++..+ ..+++++|+ +.|++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 5555666544 469999999 9999887642
Q ss_pred ---------CCceEEEcccCc-cCC--CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 64 ---------PGVKHVGGDMFQ-SVP--NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 64 ---------~~i~~~~~d~~~-~~~--~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
.++.|.+.|+.+ +++ .. |+|+|.++++|++++...++++++++.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 258899999988 554 33 9999999999999887789999999999999999983
No 132
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.65 E-value=4.1e-16 Score=109.19 Aligned_cols=106 Identities=10% Similarity=0.034 Sum_probs=83.0
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CC--ceEEEcccCc-cCCCC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PG--VKHVGGDMFQ-SVPNG 80 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~--i~~~~~d~~~-~~~~~ 80 (184)
+.+.+...+ +++.+|||+|||+|.++..++...|.++++++|+ +.|++.++++ .+ .++...|... ..+..
T Consensus 39 fY~~~~~~l---~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~ 115 (200)
T 3fzg_A 39 FYTYVFGNI---KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGT 115 (200)
T ss_dssp HHHHHHHHS---CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSE
T ss_pred HHHHHHhhc---CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCC
Confidence 344444444 4688999999999999999999999999999999 9999998875 12 2344467665 33333
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|+|++..++|++ ++. ...+.++.+.|+|||.+|-.+
T Consensus 116 ~DvVLa~k~LHlL-~~~-~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 116 YDVVFLLKMLPVL-KQQ-DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEEEETCHHHH-HHT-TCCHHHHHHTCEEEEEEEEEE
T ss_pred cChhhHhhHHHhh-hhh-HHHHHHHHHHhCCCCEEEEeC
Confidence 999999999999 333 356669999999999988866
No 133
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.65 E-value=5.6e-16 Score=116.15 Aligned_cols=151 Identities=15% Similarity=0.148 Sum_probs=99.2
Q ss_pred hHHHHHHHhcCCC-CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhh-CCCCCCceEE-EcccCc----cCCC
Q 030025 8 VLQKILEAYKGFE-HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQH-SPEYPGVKHV-GGDMFQ----SVPN 79 (184)
Q Consensus 8 ~~~~l~~~~~~~~-~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~-a~~~~~i~~~-~~d~~~----~~~~ 79 (184)
-...+++.+. +. +..+|||||||||.++..+++. +..+++++|+ +.|++. +++.+++... ..++.. .++.
T Consensus 72 Kl~~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~ 149 (291)
T 3hp7_A 72 KLEKALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE 149 (291)
T ss_dssp HHHHHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT
T ss_pred HHHHHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC
Confidence 3456677776 54 5679999999999999988886 4469999999 889877 3444554332 233322 1232
Q ss_pred --CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe-eecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH
Q 030025 80 --GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE-SVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF 156 (184)
Q Consensus 80 --~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (184)
.|+|++..+++++ ..+|.+++++|+|||.+++.- +.++.... .... .... ..+..+.+..+++
T Consensus 150 ~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~-----~~~~-~G~v---rd~~~~~~~~~~v 215 (291)
T 3hp7_A 150 GLPSFASIDVSFISL-----NLILPALAKILVDGGQVVALVKPQFEAGRE-----QIGK-NGIV---RESSIHEKVLETV 215 (291)
T ss_dssp CCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCGG-----GCC--CCCC---CCHHHHHHHHHHH
T ss_pred CCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECcccccChh-----hcCC-CCcc---CCHHHHHHHHHHH
Confidence 3999998888865 268999999999999999852 11211100 0000 0000 0001123478999
Q ss_pred HHHHHHcCCceeEEEeec
Q 030025 157 TTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~~ 174 (184)
.++++++||....+...+
T Consensus 216 ~~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 216 TAFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp HHHHHHTTEEEEEEEECS
T ss_pred HHHHHHCCCEEEEEEECC
Confidence 999999999988877653
No 134
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.64 E-value=3.3e-16 Score=121.95 Aligned_cols=110 Identities=15% Similarity=0.212 Sum_probs=89.5
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---------CCceEEEcccCccC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---------PGVKHVGGDMFQSV 77 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---------~~i~~~~~d~~~~~ 77 (184)
..+.+++.++ ..+..+|||+|||+|.++..+++.+|..+++++|. +.+++.++++ .++++..+|+.+++
T Consensus 210 ~~~~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~ 288 (375)
T 4dcm_A 210 GARFFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 288 (375)
T ss_dssp HHHHHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC
T ss_pred HHHHHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC
Confidence 3456788887 66668999999999999999999999999999999 8899888764 14788999999865
Q ss_pred CC-C-CEEEechhhhc---CChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 78 PN-G-DAILIKWILHD---WSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 78 ~~-~-D~i~~~~~l~~---~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+. . |+|+++..+|+ +.+.....+++++.+.|+|||++++..
T Consensus 289 ~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 289 EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 54 3 99999988886 334444578999999999999999965
No 135
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.64 E-value=1.2e-15 Score=115.65 Aligned_cols=140 Identities=14% Similarity=0.178 Sum_probs=99.9
Q ss_pred HHHHHHHhc--CCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCc
Q 030025 9 LQKILEAYK--GFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQ 75 (184)
Q Consensus 9 ~~~l~~~~~--~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~ 75 (184)
..+++.+++ ..++..+|||||||+|.++..+++..+..+++++|+ +.+++.++++ ++++++.+|..+
T Consensus 81 y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 160 (304)
T 3bwc_A 81 YHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA 160 (304)
T ss_dssp HHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred HHHHHhhhhhhcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 445555443 125678999999999999999998877789999999 8888877652 579999999987
Q ss_pred -cC---CCC-CEEEechhhhcCChHHH--HHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCc
Q 030025 76 -SV---PNG-DAILIKWILHDWSDEHC--LKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGG 148 (184)
Q Consensus 76 -~~---~~~-D~i~~~~~l~~~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (184)
.. +.. |+|++....++.+.... .+++++++++|+|||++++.... . . .
T Consensus 161 ~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~---~-----------~-----------~ 215 (304)
T 3bwc_A 161 FVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES---I-----------W-----------L 215 (304)
T ss_dssp HHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC---T-----------T-----------T
T ss_pred HHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC---c-----------c-----------c
Confidence 22 233 99999776655332211 47899999999999999986421 0 0 0
Q ss_pred cccCHHHHHHHHHHcCCceeEEEee
Q 030025 149 KERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 149 ~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
......++.+.++++||..++....
T Consensus 216 ~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 216 DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 0124678889999999998887754
No 136
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.64 E-value=2.8e-15 Score=111.16 Aligned_cols=139 Identities=9% Similarity=0.083 Sum_probs=102.0
Q ss_pred HHHhcCCC-CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c--CC-C
Q 030025 13 LEAYKGFE-HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S--VP-N 79 (184)
Q Consensus 13 ~~~~~~~~-~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~--~~-~ 79 (184)
....+ .. +..+|||+|||+|.++..++++.+. +++++|+ +.+++.|+++ +++.++.+|+.+ . ++ .
T Consensus 41 ~~~~~-~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~ 118 (259)
T 3lpm_A 41 AKFSY-LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKE 118 (259)
T ss_dssp HHHCC-CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTT
T ss_pred HHHhc-CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccC
Confidence 33444 77 7899999999999999999998765 9999999 8899888764 369999999987 2 32 3
Q ss_pred C-CEEEechhhhcC------------------ChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhH
Q 030025 80 G-DAILIKWILHDW------------------SDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVL 140 (184)
Q Consensus 80 ~-D~i~~~~~l~~~------------------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 140 (184)
. |+|+++-.++.. .......+++.+.++|+|||++++... .
T Consensus 119 ~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~----------------- 178 (259)
T 3lpm_A 119 RADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---P----------------- 178 (259)
T ss_dssp CEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---T-----------------
T ss_pred CccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---H-----------------
Confidence 3 999996554332 112335799999999999999999421 1
Q ss_pred hhhhCCCccccCHHHHHHHHHHcCCceeEEEeec------CceEEEEEe
Q 030025 141 VMTQYPGGKERTKHEFTTLATEAGFSGIRFVCFF------HNLWVMEFY 183 (184)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~~~~------~~~~~~~~~ 183 (184)
....++.+.+++.||...++.... ....++++.
T Consensus 179 ----------~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 217 (259)
T 3lpm_A 179 ----------ERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGI 217 (259)
T ss_dssp ----------TTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEE
T ss_pred ----------HHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEE
Confidence 135677888999999988776542 244556554
No 137
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=2.5e-15 Score=106.24 Aligned_cols=116 Identities=11% Similarity=-0.026 Sum_probs=88.9
Q ss_pred cHHhHHHHHHHhcC--CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc
Q 030025 5 TTLVLQKILEAYKG--FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ 75 (184)
Q Consensus 5 ~~~~~~~l~~~~~~--~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~ 75 (184)
+..+...+++.+.. ..+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++ ++++++++|+.+
T Consensus 26 ~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 104 (189)
T 3p9n_A 26 TDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAA 104 (189)
T ss_dssp CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHH
T ss_pred cHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHH
Confidence 34555566665541 146789999999999999988775 4568999999 8999988764 479999999987
Q ss_pred -c--C-CCC-CEEEechhhhcCChHHHHHHHHHHHh--hCCCCcEEEEEeeecC
Q 030025 76 -S--V-PNG-DAILIKWILHDWSDEHCLKLLKNCHK--SIPEGGKVIVVESVLP 122 (184)
Q Consensus 76 -~--~-~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~--~L~pgG~l~i~~~~~~ 122 (184)
. + ... |+|++...+++. .++...+++.+.+ +|+|||.+++......
T Consensus 105 ~~~~~~~~~fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 105 VVAAGTTSPVDLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHCCSSCCSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHhhccCCCccEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 2 3 233 999998887654 3445689999999 9999999999765543
No 138
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=6.1e-16 Score=114.73 Aligned_cols=98 Identities=14% Similarity=0.188 Sum_probs=80.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCC--CEEEechhhhcC-Ch
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNG--DAILIKWILHDW-SD 94 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~--D~i~~~~~l~~~-~~ 94 (184)
++..+|||||||+|.++..+++. ..+++++|+ +.+++.++++..-.++.+|+.+ +++.. |+|++..+++|+ ++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 36789999999999999999987 569999999 8899888765222388899887 55443 999998877665 44
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 95 EHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 95 ~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
...++++++++|+|||++++..+..
T Consensus 131 --~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 --KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred --HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 3589999999999999999987653
No 139
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.63 E-value=2.8e-16 Score=121.14 Aligned_cols=112 Identities=20% Similarity=0.246 Sum_probs=91.7
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCccCCCC-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQSVPNG- 80 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~~~~~~- 80 (184)
..+.+++.+. ..+..+|||+|||+|.++..+++..|..+++++|. +.+++.++++ .++.+..+|+.+..+..
T Consensus 184 ~~~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 184 GSQLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 4677788886 45677999999999999999999998889999999 8888888764 34678889988743444
Q ss_pred CEEEechhhhcC---ChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 81 DAILIKWILHDW---SDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 81 D~i~~~~~l~~~---~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
|+|+++.++|+- ..+....++++++++|+|||.+++....
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 999999998862 3445568999999999999999997653
No 140
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.63 E-value=5.1e-16 Score=108.60 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=86.0
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--CCceEEEcccCc-cC---CC-C-CEEEechhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQ-SV---PN-G-DAILIKWIL 89 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~-~~---~~-~-D~i~~~~~l 89 (184)
+++..+|||||||. +.+|. +.|++.|+++ .+++++.+|+.+ ++ +. . |+|++..++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 67889999999996 23888 8899988765 369999999987 44 44 3 999999999
Q ss_pred hcC-ChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCC
Q 030025 90 HDW-SDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGF 165 (184)
Q Consensus 90 ~~~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 165 (184)
||+ ++. ..++++++++|||||++++.++....... ....++.++|.++++++||
T Consensus 74 ~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILRPGGCLFLKEPVETAVDN--------------------NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESSSCS--------------------SSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCH--HHHHHHHHHHCCCCEEEEEEccccccccc--------------------ccccCCHHHHHHHHHHCCC
Confidence 999 655 47999999999999999997664322100 1112478999999999999
No 141
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.63 E-value=5.1e-16 Score=113.40 Aligned_cols=151 Identities=15% Similarity=0.081 Sum_probs=92.0
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CC--------ceEEE-cccCcc
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PG--------VKHVG-GDMFQS 76 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~--------i~~~~-~d~~~~ 76 (184)
-..++++.++...+..+|||||||||.++..+++.. ..+++++|+ +.|++.+++. ++ +.+.. .|+...
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQG 102 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSC
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcC
Confidence 355677777622346699999999999999999873 349999999 8888775543 32 32222 222111
Q ss_pred CCCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHH
Q 030025 77 VPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEF 156 (184)
Q Consensus 77 ~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (184)
. .|.+.+..++.++ ..++++++++|||||.+++.. .+.. +..............+.....+.+++
T Consensus 103 ~--~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p~~------e~~~~~~~~~G~~~d~~~~~~~~~~l 167 (232)
T 3opn_A 103 R--PSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALI--KPQF------EAGREQVGKNGIIRDPKVHQMTIEKV 167 (232)
T ss_dssp C--CSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CHHH------HSCHHHHC-CCCCCCHHHHHHHHHHH
T ss_pred C--CCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE--Cccc------ccCHHHhCcCCeecCcchhHHHHHHH
Confidence 1 1444444444443 368999999999999999853 1110 00000000000000001123478999
Q ss_pred HHHHHHcCCceeEEEeec
Q 030025 157 TTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 157 ~~~l~~aGf~~i~~~~~~ 174 (184)
.++++++||+++.+...+
T Consensus 168 ~~~l~~aGf~v~~~~~~p 185 (232)
T 3opn_A 168 LKTATQLGFSVKGLTFSP 185 (232)
T ss_dssp HHHHHHHTEEEEEEEECS
T ss_pred HHHHHHCCCEEEEEEEcc
Confidence 999999999998887653
No 142
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.63 E-value=1.8e-17 Score=122.55 Aligned_cols=145 Identities=10% Similarity=0.036 Sum_probs=94.0
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc----cCC----CC-CEE
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ----SVP----NG-DAI 83 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~----~~~----~~-D~i 83 (184)
+..+|||+|||+|.++..++++.+..+++++|+ +.|++.|+++ ++++++.+|+.+ +++ .. |+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 567999999999999999999887889999999 8999888764 359999999643 343 23 999
Q ss_pred EechhhhcCCh-------------HHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccc
Q 030025 84 LIKWILHDWSD-------------EHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKE 150 (184)
Q Consensus 84 ~~~~~l~~~~~-------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (184)
+++-.+++... +....++.+++++|||||.+.+.+...... ..............+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~---------~~~l~~~g~~~~~~~~~ 215 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDS---------LQLKKRLRWYSCMLGKK 215 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHH---------HHHGGGBSCEEEEESST
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHH---------HhcccceEEEEECCCCh
Confidence 99866654330 112256788999999999998865432110 00000000000001222
Q ss_pred cCHHHHHHHHHHcCCceeEEEeec
Q 030025 151 RTKHEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 151 ~~~~~~~~~l~~aGf~~i~~~~~~ 174 (184)
.+.+++.++++++||+.+++....
T Consensus 216 ~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 216 CSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp TSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCceEEEEEe
Confidence 345889999999999998877653
No 143
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.62 E-value=1.6e-15 Score=111.86 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=87.6
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhh--CCCCeEEEeec-hhHhhhCCCC---C-------C--------
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSK--YPHIKGINFDL-PHVIQHSPEY---P-------G-------- 65 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~--~~~~~~~~~D~-~~~~~~a~~~---~-------~-------- 65 (184)
.++..+++.+. ..+..+|||+|||+|.++..+++. .+..+++++|+ +.+++.|+++ . +
T Consensus 38 ~l~~~~l~~~~-~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLP-GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSS-CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc-cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 44555555554 345679999999999999999988 67789999999 8999888743 2 1
Q ss_pred -----------------ce-------------EEEcccCccC------CC-C-CEEEechhhhcCCh-------HHHHHH
Q 030025 66 -----------------VK-------------HVGGDMFQSV------PN-G-DAILIKWILHDWSD-------EHCLKL 100 (184)
Q Consensus 66 -----------------i~-------------~~~~d~~~~~------~~-~-D~i~~~~~l~~~~~-------~~~~~~ 100 (184)
++ +..+|+.+.. .. . |+|+++..+++..+ +....+
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~ 196 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGL 196 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHH
Confidence 66 9999998843 33 3 99999877666542 455689
Q ss_pred HHHHHhhCCCCcEEEEEeee
Q 030025 101 LKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 101 l~~~~~~L~pgG~l~i~~~~ 120 (184)
++++.++|+|||++++.+..
T Consensus 197 l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 197 LRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHSCTTCEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEeCcc
Confidence 99999999999999995543
No 144
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.62 E-value=6.9e-15 Score=104.78 Aligned_cols=106 Identities=22% Similarity=0.223 Sum_probs=81.1
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC--CCeEEEeechhHhhhCCCCCCceEEEcccCc-c---------
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP--HIKGINFDLPHVIQHSPEYPGVKHVGGDMFQ-S--------- 76 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~--~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~-~--------- 76 (184)
..++.+.+..+++..+|||+|||+|.++..++++++ ..+++++|++.+. ..+++.++++|+.+ +
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccc
Confidence 444666666356778999999999999999999987 6899999994432 24679999999987 4
Q ss_pred ----------------CCC-C-CEEEechhhhcCC----hHH-----HHHHHHHHHhhCCCCcEEEEEe
Q 030025 77 ----------------VPN-G-DAILIKWILHDWS----DEH-----CLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 77 ----------------~~~-~-D~i~~~~~l~~~~----~~~-----~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
++. . |+|++..++++.. +.. ...+++++.++|+|||.+++..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 343 3 9999988777642 111 1247999999999999999854
No 145
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.62 E-value=3.9e-15 Score=103.49 Aligned_cols=110 Identities=19% Similarity=0.209 Sum_probs=86.1
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeechhHhhhCCCCCCceEEEcccCc-c--------
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQ-S-------- 76 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~-~-------- 76 (184)
.....+++.+....+..+|||+|||+|.++..+++.+ +..+++++|.+.+++. +++.+..+|+.+ +
T Consensus 8 ~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~ 83 (180)
T 1ej0_A 8 FKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI----VGVDFLQGDFRDELVMKALLER 83 (180)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC----TTEEEEESCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc----CcEEEEEcccccchhhhhhhcc
Confidence 3445666666535677899999999999999999984 6789999999335433 789999999987 4
Q ss_pred CCC-C-CEEEechhhhcCChHH---------HHHHHHHHHhhCCCCcEEEEEeee
Q 030025 77 VPN-G-DAILIKWILHDWSDEH---------CLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 77 ~~~-~-D~i~~~~~l~~~~~~~---------~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
++. . |+|++..++++.+... ...+++++.++|+|||.+++....
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 553 3 9999998888765431 147899999999999999997653
No 146
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.62 E-value=1.1e-15 Score=109.80 Aligned_cols=105 Identities=12% Similarity=0.173 Sum_probs=87.7
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCcc-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQS- 76 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~- 76 (184)
...+...+++.+. ..+..+|||+|||+|..+..+++. ..+++++|. +.+++.++++ +++++..+|..+.
T Consensus 62 ~~~~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 62 QPYMVARMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC
Confidence 3456777888887 888999999999999999999998 579999999 8898888753 5799999999873
Q ss_pred CC-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 77 VP-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 77 ~~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.+ .. |+|++..+++++++ ++.+.|+|||++++....
T Consensus 139 ~~~~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 22 23 99999999999875 478899999999996654
No 147
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.62 E-value=5.5e-16 Score=114.40 Aligned_cols=121 Identities=10% Similarity=0.061 Sum_probs=93.8
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cCC----CC-CEEEec
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SVP----NG-DAILIK 86 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~~----~~-D~i~~~ 86 (184)
.+..+|||||||+|..+..++..+|..+++++|. +.+++.++++ .+++++++|+.+ +.. .. |+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4678999999999999999999999999999999 8888888764 469999999987 331 33 999996
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCc
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFS 166 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 166 (184)
.+ .+. ..+++.+.++|||||++++....... ....++.+.+++.||+
T Consensus 159 a~----~~~--~~ll~~~~~~LkpgG~l~~~~g~~~~---------------------------~e~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 159 AV----APL--CVLSELLLPFLEVGGAAVAMKGPRVE---------------------------EELAPLPPALERLGGR 205 (249)
T ss_dssp SS----CCH--HHHHHHHGGGEEEEEEEEEEECSCCH---------------------------HHHTTHHHHHHHHTEE
T ss_pred Cc----CCH--HHHHHHHHHHcCCCeEEEEEeCCCcH---------------------------HHHHHHHHHHHHcCCe
Confidence 54 222 37899999999999999985421100 0134566778889999
Q ss_pred eeEEEee
Q 030025 167 GIRFVCF 173 (184)
Q Consensus 167 ~i~~~~~ 173 (184)
..++...
T Consensus 206 ~~~~~~~ 212 (249)
T 3g89_A 206 LGEVLAL 212 (249)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8887654
No 148
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.62 E-value=5.2e-15 Score=116.55 Aligned_cols=115 Identities=17% Similarity=0.246 Sum_probs=89.5
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhC-------CC--------CCCceEE
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHS-------PE--------YPGVKHV 69 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a-------~~--------~~~i~~~ 69 (184)
..++..+++.+. +.+..+|||||||+|..+..+++.++..+++|+|+ +.+++.| ++ ..+++++
T Consensus 228 p~~v~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 346778888887 88899999999999999999999877778999999 7777666 43 2578898
Q ss_pred EcccC-cc--C----CCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCC
Q 030025 70 GGDMF-QS--V----PNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPEL 124 (184)
Q Consensus 70 ~~d~~-~~--~----~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 124 (184)
.+|.. .+ + ...|+|+++.+++ . ++...+|+++.+.|||||++++.+...+..
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred EcCccccccccccccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 87654 21 2 2239999877663 2 344578999999999999999988766543
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.62 E-value=7.6e-16 Score=110.26 Aligned_cols=104 Identities=13% Similarity=0.205 Sum_probs=82.1
Q ss_pred HhHHHHHHHhcCCC---CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCcc
Q 030025 7 LVLQKILEAYKGFE---HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQS 76 (184)
Q Consensus 7 ~~~~~l~~~~~~~~---~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~ 76 (184)
.+.+.+++.+. .. +..+|||+|||+|..+..+++.+|..+++++|. +.+++.++++ +++.+..+|+.+.
T Consensus 49 ~~~~~~~~~l~-~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 127 (207)
T 1jsx_A 49 MLVRHILDSIV-VAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF 127 (207)
T ss_dssp HHHHHHHHHHH-HGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS
T ss_pred HHHHHHHhhhh-hhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC
Confidence 34556666654 22 368999999999999999999999999999999 8888877653 4599999999873
Q ss_pred CC-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 77 VP-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 77 ~~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
.+ .. |+|++... .+. ..+++++.++|+|||.+++.
T Consensus 128 ~~~~~~D~i~~~~~----~~~--~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 128 PSEPPFDGVISRAF----ASL--NDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CCCSCEEEEECSCS----SSH--HHHHHHHTTSEEEEEEEEEE
T ss_pred CccCCcCEEEEecc----CCH--HHHHHHHHHhcCCCcEEEEE
Confidence 33 33 99997542 222 37899999999999999995
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.62 E-value=1.1e-15 Score=114.33 Aligned_cols=128 Identities=14% Similarity=0.152 Sum_probs=100.2
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVPN 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~~ 79 (184)
...++..+. +.+..+|||+|||+|.++..+++. .|..+++++|. +.+++.++++ +++.+..+|+.+.++.
T Consensus 101 ~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 101 SSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 346677776 788899999999999999999999 67889999999 8888888764 4789999999875543
Q ss_pred -C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHH
Q 030025 80 -G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFT 157 (184)
Q Consensus 80 -~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (184)
. |+|++. .+++ ..+++++.++|+|||++++.++... ...++.
T Consensus 180 ~~~D~V~~~-----~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~-----------------------------~~~~~~ 223 (277)
T 1o54_A 180 KDVDALFLD-----VPDP--WNYIDKCWEALKGGGRFATVCPTTN-----------------------------QVQETL 223 (277)
T ss_dssp CSEEEEEEC-----CSCG--GGTHHHHHHHEEEEEEEEEEESSHH-----------------------------HHHHHH
T ss_pred CccCEEEEC-----CcCH--HHHHHHHHHHcCCCCEEEEEeCCHH-----------------------------HHHHHH
Confidence 3 999983 3333 3689999999999999999763210 135566
Q ss_pred HHHHHcCCceeEEEee
Q 030025 158 TLATEAGFSGIRFVCF 173 (184)
Q Consensus 158 ~~l~~aGf~~i~~~~~ 173 (184)
+.++++||..++....
T Consensus 224 ~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 224 KKLQELPFIRIEVWES 239 (277)
T ss_dssp HHHHHSSEEEEEEECC
T ss_pred HHHHHCCCceeEEEEE
Confidence 7788899988877653
No 151
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.61 E-value=6.1e-16 Score=119.43 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=88.4
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCCC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVPN 79 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~~ 79 (184)
..+.+++.+. ..+..+|||||||+|.++..+++. +..+++++|.+.+++.+++. ++++++.+|+.+ +.+.
T Consensus 38 y~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~ 115 (348)
T 2y1w_A 38 YQRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 115 (348)
T ss_dssp HHHHHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCC
Confidence 4566777776 677899999999999999988886 45699999995577766542 579999999988 5555
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
. |+|++..+++|+..+.....+.+++++|||||.+++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 5 9999999999887666567888999999999999864
No 152
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.61 E-value=3.4e-15 Score=108.18 Aligned_cols=99 Identities=12% Similarity=0.053 Sum_probs=79.7
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCcc---C-----CCCC
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQS---V-----PNGD 81 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~---~-----~~~D 81 (184)
..+..+|||||||+|..+..+++.+| ..+++++|+ +.+++.++++ ++++++.+|+.+. + ...|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 44678999999999999999999987 789999999 8888887653 4699999999762 1 1249
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecC
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLP 122 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 122 (184)
+|++..... ....+++++.++|+|||.+++.+....
T Consensus 136 ~v~~d~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDADKQ-----NNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSCGG-----GHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred EEEEcCCcH-----HHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 999866533 234789999999999999998776543
No 153
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.60 E-value=1.9e-14 Score=104.15 Aligned_cols=130 Identities=9% Similarity=0.039 Sum_probs=101.2
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC---CCCEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP---NGDAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~---~~D~i~~~~ 87 (184)
.++..+|+|||||+|.++..+++..|..+++++|+ +.+++.|+++ +++++..+|..+.++ ..|+|++.+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 34668999999999999999999988889999999 8999988764 469999999987544 249998866
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCce
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSG 167 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 167 (184)
+-. +-...++....+.|+|+|+|++.-. . ....+.+++++.||..
T Consensus 93 ~Gg----~~i~~Il~~~~~~L~~~~~lVlq~~---~----------------------------~~~~vr~~L~~~Gf~i 137 (225)
T 3kr9_A 93 MGG----RLIARILEEGLGKLANVERLILQPN---N----------------------------REDDLRIWLQDHGFQI 137 (225)
T ss_dssp ECH----HHHHHHHHHTGGGCTTCCEEEEEES---S----------------------------CHHHHHHHHHHTTEEE
T ss_pred CCh----HHHHHHHHHHHHHhCCCCEEEEECC---C----------------------------CHHHHHHHHHHCCCEE
Confidence 532 3345789999999999999988332 1 3677889999999999
Q ss_pred eEEEee---cCceEEEEEe
Q 030025 168 IRFVCF---FHNLWVMEFY 183 (184)
Q Consensus 168 i~~~~~---~~~~~~~~~~ 183 (184)
++..-. ...+.++.+.
T Consensus 138 ~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 138 VAESILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEEE
Confidence 876533 2344455543
No 154
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=2.2e-15 Score=108.49 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=87.6
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSV 77 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~ 77 (184)
..+...+++.+. ..+..+|||+|||+|..+..+++.. +..+++++|. +.+++.++++ +++.+..+|....+
T Consensus 63 ~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 63 IHMVGMMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC
T ss_pred HHHHHHHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC
Confidence 455667888887 8888999999999999999999986 6689999999 8898888764 57999999987644
Q ss_pred C--CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 78 P--NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 78 ~--~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+ .. |+|++..+++|++ +++.+.|+|||++++...
T Consensus 142 ~~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GGGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CCCCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEEC
Confidence 3 23 9999999999876 368899999999999754
No 155
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.59 E-value=9e-15 Score=109.59 Aligned_cols=121 Identities=16% Similarity=0.157 Sum_probs=93.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCC-CEEEechh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG-DAILIKWI 88 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~-D~i~~~~~ 88 (184)
.++..+|||+|||+|.++..+++..+. +++++|+ +.+++.|+++ ++++++.+|+.+ ..... |+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc
Confidence 356789999999999999999998765 8999999 8999888753 348899999998 33333 99998544
Q ss_pred hhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCcee
Q 030025 89 LHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGI 168 (184)
Q Consensus 89 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i 168 (184)
.. ...+++++.++|+|||.+++.+....... .....+++.+.++++||+..
T Consensus 202 ~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----------------------~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 202 VR------THEFIPKALSIAKDGAIIHYHNTVPEKLM-----------------------PREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp SS------GGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------TTTTHHHHHHHHHHTTCEEE
T ss_pred hh------HHHHHHHHHHHCCCCeEEEEEEeeccccc-----------------------cccHHHHHHHHHHHcCCeeE
Confidence 22 13689999999999999999886542210 01246778899999999876
Q ss_pred E
Q 030025 169 R 169 (184)
Q Consensus 169 ~ 169 (184)
.
T Consensus 253 ~ 253 (278)
T 2frn_A 253 K 253 (278)
T ss_dssp E
T ss_pred E
Confidence 5
No 156
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.59 E-value=2.6e-14 Score=103.61 Aligned_cols=130 Identities=9% Similarity=-0.026 Sum_probs=102.4
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccC-CC--CCEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSV-PN--GDAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~-~~--~D~i~~~~ 87 (184)
.++..+|+|||||+|.++..+++..|..+++++|+ +.+++.|+++ +++++..+|..+.+ +. .|+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 45678999999999999999999988889999999 8999988764 46999999999843 32 39998766
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCce
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSG 167 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 167 (184)
+.. +-...++.+..+.|+++|+|++.-.. ....+++++.+.||..
T Consensus 99 mGg----~lI~~IL~~~~~~l~~~~~lIlqp~~-------------------------------~~~~lr~~L~~~Gf~i 143 (230)
T 3lec_A 99 MGG----RLIADILNNDIDKLQHVKTLVLQPNN-------------------------------REDDLRKWLAANDFEI 143 (230)
T ss_dssp ECH----HHHHHHHHHTGGGGTTCCEEEEEESS-------------------------------CHHHHHHHHHHTTEEE
T ss_pred Cch----HHHHHHHHHHHHHhCcCCEEEEECCC-------------------------------ChHHHHHHHHHCCCEE
Confidence 543 33457899999999999999884410 3678899999999999
Q ss_pred eEEEee---cCceEEEEEe
Q 030025 168 IRFVCF---FHNLWVMEFY 183 (184)
Q Consensus 168 i~~~~~---~~~~~~~~~~ 183 (184)
++..-. ...+.++.+.
T Consensus 144 ~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 144 VAEDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEEEC--CEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEEE
Confidence 887643 3455566554
No 157
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=1.8e-15 Score=109.57 Aligned_cols=99 Identities=10% Similarity=0.219 Sum_probs=79.1
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc---cCC-----CC-
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ---SVP-----NG- 80 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~---~~~-----~~- 80 (184)
..+..+|||||||+|..+..+++..+ ..+++++|+ +.+++.|+++ ++++++.+|+.+ ..+ ..
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34578999999999999999999864 789999999 8999988764 469999999854 222 23
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
|+|++....+++.+. ..+++.+ ++|+|||++++.+..
T Consensus 136 D~V~~d~~~~~~~~~--~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 136 DMVFLDHWKDRYLPD--TLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp SEEEECSCGGGHHHH--HHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEEcCCcccchHH--HHHHHhc-cccCCCeEEEEeCCC
Confidence 999998877765432 3677777 999999999996654
No 158
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.58 E-value=3.5e-15 Score=109.17 Aligned_cols=99 Identities=12% Similarity=0.263 Sum_probs=74.6
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCC------------CCCCceEEEcccCc--c--CCCC--
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSP------------EYPGVKHVGGDMFQ--S--VPNG-- 80 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~------------~~~~i~~~~~d~~~--~--~~~~-- 80 (184)
.+..+|||||||+|.++..+++.+|...++|+|+ +.|++.|+ ...++.++.+|+.+ + ++..
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567899999999999999999999999999999 88887553 23689999999986 2 4443
Q ss_pred CEEEechhhhcCChH--H----HHHHHHHHHhhCCCCcEEEEEe
Q 030025 81 DAILIKWILHDWSDE--H----CLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 81 D~i~~~~~l~~~~~~--~----~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|.|++...-.+.... . ...+++++.++|||||.|++..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 988875433221100 0 0268999999999999999864
No 159
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=7.6e-15 Score=108.98 Aligned_cols=104 Identities=9% Similarity=0.199 Sum_probs=78.9
Q ss_pred HHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCcc-----
Q 030025 13 LEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQS----- 76 (184)
Q Consensus 13 ~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~~----- 76 (184)
....+ ..+..+|||+|||+|.++..++++.|..+++++|+ +.+++.|+++ +++.++.+|+.+.
T Consensus 29 ~~~~~-~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 29 ASLVA-DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHTCC-CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHhc-ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 33444 66778999999999999999999998899999999 8888877543 2489999999874
Q ss_pred ---CCC-C-CEEEechhhhcC----------------ChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 77 ---VPN-G-DAILIKWILHDW----------------SDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 77 ---~~~-~-D~i~~~~~l~~~----------------~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
++. . |+|+++-.++.. .......+++.+.++|+|||++++.
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 223 3 999997433321 1112357899999999999999984
No 160
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=1.5e-15 Score=110.88 Aligned_cols=107 Identities=17% Similarity=0.261 Sum_probs=84.0
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC--
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP-- 78 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~-- 78 (184)
...+...+. ..+..+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|+.+..+
T Consensus 60 ~~~l~~~~~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 138 (232)
T 3ntv_A 60 LDLIKQLIR-MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV 138 (232)
T ss_dssp HHHHHHHHH-HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH
T ss_pred HHHHHHHHh-hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh
Confidence 344444444 55688999999999999999999888899999999 8898888763 479999999987322
Q ss_pred --CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 79 --NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 79 --~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
.. |+|++..... ....+++++.++|+|||++++.+...
T Consensus 139 ~~~~fD~V~~~~~~~-----~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 139 NDKVYDMIFIDAAKA-----QSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp TTSCEEEEEEETTSS-----SHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred ccCCccEEEEcCcHH-----HHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 33 9999865433 23468999999999999998866544
No 161
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.58 E-value=5.8e-15 Score=108.51 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=80.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc--c-C-----CCC-
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ--S-V-----PNG- 80 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~--~-~-----~~~- 80 (184)
..+..+|||||||+|..+..+++..+ ..+++++|+ +.+++.|+++ ++++++.+|+.+ + . ...
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 34578999999999999999999875 789999999 8888887664 479999999976 2 2 233
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCC
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPE 123 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 123 (184)
|+|++.... .....+++++.++|+|||.+++.+.....
T Consensus 138 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 138 DFIFIDADK-----TNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEEESCG-----GGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred eEEEEcCCh-----HHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 999886542 23347899999999999999998776544
No 162
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.58 E-value=3.4e-15 Score=113.83 Aligned_cols=104 Identities=15% Similarity=0.243 Sum_probs=87.6
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SV 77 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~ 77 (184)
.....+++.+. ..+..+|||||||+|.++..+++..+ ..+++++|+ +.+++.++++ ++++++.+|+.+ ..
T Consensus 62 ~~~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHHHHHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 66778888887 88899999999999999999999876 478999999 8898888754 569999999987 32
Q ss_pred C-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 78 P-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 78 ~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+ .. |+|++..+++|++ +++.+.|||||++++...
T Consensus 141 ~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred cCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 2 23 9999999999986 457889999999999754
No 163
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.58 E-value=1.3e-14 Score=106.31 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=76.7
Q ss_pred CCCeEEEecCCcChHHHHHHhh----CCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCcc--C---CC--CCEEEech
Q 030025 21 HIKQLVDVGGSLGNTLKAITSK----YPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQS--V---PN--GDAILIKW 87 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~~--~---~~--~D~i~~~~ 87 (184)
+..+|||||||+|..+..+++. .+..+++++|+ +.+++.|+.. ++++++.+|..+. + .. .|+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4689999999999999999987 67899999999 8898888653 6899999999862 2 22 39998866
Q ss_pred hhhcCChHHHHHHHHHHHh-hCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHK-SIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~-~L~pgG~l~i~~~ 119 (184)
. | . +...+|+++.+ .|||||++++.+.
T Consensus 161 ~-~-~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 161 A-H-A---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp S-C-S---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred c-h-H---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 5 3 2 22468999997 9999999999664
No 164
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.58 E-value=2.5e-15 Score=116.45 Aligned_cols=108 Identities=11% Similarity=0.175 Sum_probs=84.7
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCC------cChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGS------LGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SV 77 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G------~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~ 77 (184)
.+.+.+++.+. .+..+||||||| +|..+..++++ +|+.+++++|+ +.|. ...++++++++|+.+ ++
T Consensus 204 ~~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf 278 (419)
T 3sso_A 204 PHYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---VDELRIRTIQGDQNDAEF 278 (419)
T ss_dssp HHHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---GCBTTEEEEECCTTCHHH
T ss_pred HHHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---hcCCCcEEEEecccccch
Confidence 45677777765 456899999999 77777777776 68999999999 7774 234789999999988 44
Q ss_pred C-------CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecC
Q 030025 78 P-------NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLP 122 (184)
Q Consensus 78 ~-------~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 122 (184)
. .. |+|++.. .|++. +....|++++++|||||++++.|...+
T Consensus 279 ~~~l~~~d~sFDlVisdg-sH~~~--d~~~aL~el~rvLKPGGvlVi~Dl~ts 328 (419)
T 3sso_A 279 LDRIARRYGPFDIVIDDG-SHINA--HVRTSFAALFPHVRPGGLYVIEDMWTA 328 (419)
T ss_dssp HHHHHHHHCCEEEEEECS-CCCHH--HHHHHHHHHGGGEEEEEEEEEECGGGG
T ss_pred hhhhhcccCCccEEEECC-cccch--hHHHHHHHHHHhcCCCeEEEEEecccc
Confidence 3 33 9999865 45543 345889999999999999999987643
No 165
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.57 E-value=5.4e-15 Score=107.60 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=87.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCccCC-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQSVP- 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~~~~- 78 (184)
...+...+++.+. ..+..+|||+|||+|.++..+++.. .+++++|. +.+++.++++ .++.++.+|+.+..+
T Consensus 55 ~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 55 ALNLGIFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEE 131 (231)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGG
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccccc
Confidence 3456778888887 8888999999999999999999986 79999999 8888888764 279999999987332
Q ss_pred -CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 79 -NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 79 -~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.. |+|++..+++|+.+ ++.+.|+|||++++....
T Consensus 132 ~~~fD~v~~~~~~~~~~~--------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLC--------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GCCEEEEEESSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcHHHHHH--------HHHHHcCCCcEEEEEEcC
Confidence 23 99999999998863 578899999999997643
No 166
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.57 E-value=3e-15 Score=119.85 Aligned_cols=108 Identities=18% Similarity=0.114 Sum_probs=88.9
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCC
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~ 78 (184)
...+.+++.+. ..+..+|||||||+|.++..+++ .+..+++++|++.+++.|++. ++++++.+|+.+ +.+
T Consensus 145 ~~~~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 145 TYQRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC
Confidence 34566777776 66788999999999999998887 466799999994487777653 579999999988 665
Q ss_pred CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 79 NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
.. |+|++..+++|+..++....+.++++.|||||.+++
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 55 999999888888767667888899999999999985
No 167
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.57 E-value=6.5e-15 Score=109.57 Aligned_cols=94 Identities=18% Similarity=0.268 Sum_probs=79.5
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc-cCCCC--CEEEechhhhcCCh
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-SVPNG--DAILIKWILHDWSD 94 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~~~~~--D~i~~~~~l~~~~~ 94 (184)
.+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++. +++.+..+|+.+ +++.. |+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 5678999999999999999999888889999999 8899888765 789999999987 55543 999986652
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEeeecC
Q 030025 95 EHCLKLLKNCHKSIPEGGKVIVVESVLP 122 (184)
Q Consensus 95 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 122 (184)
..++++.++|+|||++++.++...
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred ----hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 248999999999999999887543
No 168
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.57 E-value=4.7e-15 Score=104.31 Aligned_cols=114 Identities=11% Similarity=0.015 Sum_probs=87.6
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ 75 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~ 75 (184)
....+.+.+++.+....+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++ ++++++.+|+.+
T Consensus 27 ~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 27 TTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 355677778888753567889999999999999988874 4579999999 8899888764 469999999977
Q ss_pred cC------CCC-CEEEechhhhcCChHHHHHHHHHH--HhhCCCCcEEEEEeeec
Q 030025 76 SV------PNG-DAILIKWILHDWSDEHCLKLLKNC--HKSIPEGGKVIVVESVL 121 (184)
Q Consensus 76 ~~------~~~-D~i~~~~~l~~~~~~~~~~~l~~~--~~~L~pgG~l~i~~~~~ 121 (184)
.. +.. |+|++..+++....+ .+++.+ .++|+|||.+++.....
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~~~~~~---~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYAKQEIV---SQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGGGCCHH---HHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCCEEEECCCCCchhHH---HHHHHHHHhcccCCCCEEEEEeCCc
Confidence 21 233 999998775533332 456666 88899999999876544
No 169
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=4.3e-15 Score=108.62 Aligned_cols=106 Identities=16% Similarity=0.214 Sum_probs=87.6
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSV 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~ 77 (184)
+..+...+++.+. ..+..+|||||||+|.++..+++..+ .+++++|. +.+++.++++ +++.+..+|...++
T Consensus 76 ~~~~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 153 (235)
T 1jg1_A 76 APHMVAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF 153 (235)
T ss_dssp CHHHHHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred cHHHHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCC
Confidence 3456778888887 88889999999999999999999977 79999998 8888888763 46899999985444
Q ss_pred CC---CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 78 PN---GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 78 ~~---~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+. .|+|++..+++++.+ ++.+.|+|||++++....
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GGGCCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECS
T ss_pred CCCCCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEec
Confidence 32 399999999998763 578899999999996643
No 170
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=1.1e-14 Score=107.39 Aligned_cols=99 Identities=18% Similarity=0.151 Sum_probs=80.0
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc---cCC---CCCEE
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ---SVP---NGDAI 83 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~---~~~---~~D~i 83 (184)
..+..+|||||||+|..+..+++..| ..+++++|+ +.+++.|+++ ++++++.+|+.+ ... ..|+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 44678999999999999999999987 789999999 8888888764 479999999876 222 23999
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecC
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLP 122 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 122 (184)
++.... +....+++++.++|||||++++.+....
T Consensus 141 ~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 141 FIDADK-----PNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp EECSCG-----GGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred EECCch-----HHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 986532 2334789999999999999999776543
No 171
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.56 E-value=4.8e-14 Score=102.98 Aligned_cols=130 Identities=9% Similarity=0.052 Sum_probs=101.0
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC-C--CCEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP-N--GDAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~-~--~D~i~~~~ 87 (184)
.++..+|||||||+|.++..+++..|..+++++|+ +.+++.|+++ +++++..+|..+.++ . .|+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 45678999999999999999999988889999999 8999988764 459999999998433 2 49998765
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCce
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSG 167 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 167 (184)
+.. +-...++.+..+.|+++|+|++.-.. ....+++++.+.||..
T Consensus 99 mGg----~lI~~IL~~~~~~L~~~~~lIlq~~~-------------------------------~~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 99 MGG----TLIRTILEEGAAKLAGVTKLILQPNI-------------------------------AAWQLREWSEQNNWLI 143 (244)
T ss_dssp ECH----HHHHHHHHHTGGGGTTCCEEEEEESS-------------------------------CHHHHHHHHHHHTEEE
T ss_pred Cch----HHHHHHHHHHHHHhCCCCEEEEEcCC-------------------------------ChHHHHHHHHHCCCEE
Confidence 533 33457899999999999999984310 3678889999999998
Q ss_pred eEEEee---cCceEEEEEe
Q 030025 168 IRFVCF---FHNLWVMEFY 183 (184)
Q Consensus 168 i~~~~~---~~~~~~~~~~ 183 (184)
++..-. ...+.++.+.
T Consensus 144 ~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 144 TSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEEE
Confidence 765533 2344565553
No 172
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.56 E-value=2.4e-15 Score=105.11 Aligned_cols=114 Identities=8% Similarity=0.017 Sum_probs=85.6
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCcc
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQS 76 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~ 76 (184)
...+...+++.+....+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++ ++++++.+|+.+.
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 15 SDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp ---CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh
Confidence 44566777777764557789999999999999999987 5579999999 8898888653 3689999998762
Q ss_pred ---CCCC-CEEEechhhhcCChHHHHHHHHHHH--hhCCCCcEEEEEeeecC
Q 030025 77 ---VPNG-DAILIKWILHDWSDEHCLKLLKNCH--KSIPEGGKVIVVESVLP 122 (184)
Q Consensus 77 ---~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~ 122 (184)
.+.. |+|++...++. .....+++.+. ++|+|||.+++......
T Consensus 94 ~~~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 94 IDCLTGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHBCSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHhhcCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 2233 99999876543 22235677776 99999999999775543
No 173
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.56 E-value=6e-15 Score=107.87 Aligned_cols=132 Identities=11% Similarity=0.004 Sum_probs=101.2
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCCC-CEEEechhhhc
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPNG-DAILIKWILHD 91 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~~-D~i~~~~~l~~ 91 (184)
++..+|||||||+|-++..++...|..+|+++|+ +.|++.++++ .+..+...|... +.+.. |++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 4578999999999999999999999999999999 9999988775 457889999987 44443 99999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEE
Q 030025 92 WSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFV 171 (184)
Q Consensus 92 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~ 171 (184)
+++++....+ ++.+.|+|+|.++-.+.-.-.... .. -.......|.+.+.+.|...-+..
T Consensus 211 Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs--------~g-----------m~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRS--------KG-----------MFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSCSEEEEEEECC---------------C-----------HHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCC--------cc-----------hhhHHHHHHHHHHHhcCCceeeee
Confidence 9877766777 899999999998876641101000 01 112247889999999998544433
No 174
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=3.1e-14 Score=110.13 Aligned_cols=114 Identities=18% Similarity=0.119 Sum_probs=90.9
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ 75 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~ 75 (184)
....++..++.... +.+..+|||+|||+|.++..++... +..+++++|+ +.+++.|+++ +++++.++|+.+
T Consensus 187 l~~~la~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~ 265 (354)
T 3tma_A 187 LTPVLAQALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARH 265 (354)
T ss_dssp CCHHHHHHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGG
T ss_pred cCHHHHHHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhh
Confidence 34556777888877 8889999999999999999999987 8899999999 9999988764 379999999988
Q ss_pred -cCC-CC-CEEEechhhhcCCh--H----HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 76 -SVP-NG-DAILIKWILHDWSD--E----HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 76 -~~~-~~-D~i~~~~~l~~~~~--~----~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+.+ .. |+|+++-.+..... . ....+++++++.|+|||.+++..
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 433 23 99999665544211 1 12578999999999999999964
No 175
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.55 E-value=5e-15 Score=115.43 Aligned_cols=109 Identities=14% Similarity=0.140 Sum_probs=84.7
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCCCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~ 80 (184)
.+.+.+... ..+..+|||||||+|.++..++++. ..+++++|.+.|++.++++ ++++++.+|+.+ +.+..
T Consensus 52 ~~~i~~~~~-~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 129 (376)
T 3r0q_C 52 FNAVFQNKH-HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEK 129 (376)
T ss_dssp HHHHHTTTT-TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSC
T ss_pred HHHHHhccc-cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCc
Confidence 344444445 6788999999999999999999873 3499999997777777653 459999999988 55544
Q ss_pred -CEEEechhhhcCCh-HHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 81 -DAILIKWILHDWSD-EHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 81 -D~i~~~~~l~~~~~-~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
|+|++..+.|++.. .....+++.+.++|||||.+++.+.
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 99999776666542 2344789999999999999987654
No 176
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.55 E-value=1.1e-14 Score=112.05 Aligned_cols=105 Identities=17% Similarity=0.210 Sum_probs=81.0
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCC-C
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVP-N 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~-~ 79 (184)
.+.+.+.+. ..+..+|||||||+|.++..+++. +..+++++|.+.|++.|+++ ++++++.+|+.+ +++ .
T Consensus 53 ~~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 130 (340)
T 2fyt_A 53 RDFIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVE 130 (340)
T ss_dssp HHHHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCS
T ss_pred HHHHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCC
Confidence 355666665 677899999999999999998887 34699999994488877653 579999999988 665 3
Q ss_pred C-CEEEechhhhcCC-hHHHHHHHHHHHhhCCCCcEEE
Q 030025 80 G-DAILIKWILHDWS-DEHCLKLLKNCHKSIPEGGKVI 115 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~ 115 (184)
. |+|++..+.+.+. ......+++++.++|||||.++
T Consensus 131 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3 9999876433221 2233478999999999999998
No 177
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.55 E-value=3.5e-15 Score=115.25 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=76.9
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCCC-C-CEEEechh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVPN-G-DAILIKWI 88 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~~-~-D~i~~~~~ 88 (184)
..+..+|||||||+|.++..+++. +..+++++|.+.+++.|+++ ++++++.+|+.+ +++. . |+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 456789999999999999999987 55699999995588777653 349999999998 6663 3 99999776
Q ss_pred hhcCC-hHHHHHHHHHHHhhCCCCcEEEE
Q 030025 89 LHDWS-DEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 89 l~~~~-~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
.+++. .+....+++.+.++|||||+++.
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 54442 22334789999999999999874
No 178
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.55 E-value=1.7e-14 Score=112.37 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=81.2
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCC-CC-CEEEechhhhc
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVP-NG-DAILIKWILHD 91 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~-~~-D~i~~~~~l~~ 91 (184)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.++++ .+++++.+|+.+ ..+ .. |+|+++.++|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5679999999999999999997 569999999 8899888764 358999999988 333 23 99999999887
Q ss_pred ---CChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 92 ---WSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 92 ---~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
...+....+++++.+.|+|||.+++..
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 334556689999999999999999964
No 179
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.54 E-value=3.3e-14 Score=106.32 Aligned_cols=104 Identities=14% Similarity=0.229 Sum_probs=84.5
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCC---------CCceEEEcccCc-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEY---------PGVKHVGGDMFQ- 75 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~---------~~i~~~~~d~~~- 75 (184)
....++..+. ..+..+|||+|||+|.++..+++. .|..+++++|. +.+++.++++ +++.+..+|+.+
T Consensus 87 ~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 87 DAAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred HHHHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 4567777777 888899999999999999999986 56789999999 8888777642 479999999987
Q ss_pred cCCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 76 SVPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 76 ~~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+++. . |+|++ +.+++. .+++++.++|+|||++++..+
T Consensus 166 ~~~~~~~D~v~~-----~~~~~~--~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 166 ELPDGSVDRAVL-----DMLAPW--EVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCCTTCEEEEEE-----ESSCGG--GGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCceeEEEE-----CCcCHH--HHHHHHHHhCCCCCEEEEEeC
Confidence 4443 3 99988 333332 689999999999999999764
No 180
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.54 E-value=7e-15 Score=107.27 Aligned_cols=108 Identities=11% Similarity=0.233 Sum_probs=85.5
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc--c-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ--S- 76 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~--~- 76 (184)
....+...+. ..+..+|||+|||+|..+..+++..|..+++++|. +.+++.|+++ +++.++.+|+.+ +
T Consensus 42 ~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 42 GMESLLHLLK-MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHHH-HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH
T ss_pred HHHHHHHHHh-ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 3444444444 55678999999999999999999998899999999 8888888764 469999999976 2
Q ss_pred C--CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 77 V--PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 77 ~--~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
. +.. |+|++....+ ....+++++.++|+|||++++.+...
T Consensus 121 ~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp HTTSCCEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred cccCCCccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 2 233 9999977754 22478999999999999999976543
No 181
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.53 E-value=1.2e-13 Score=97.88 Aligned_cols=109 Identities=18% Similarity=0.315 Sum_probs=79.5
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccC-------
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSV------- 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~------- 77 (184)
+..-..++.+.+..+++..+|||+|||+|.++..++++ ..+++++|++.+ ...+++.++++|+.+..
T Consensus 9 a~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~ 82 (191)
T 3dou_A 9 AAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDR 82 (191)
T ss_dssp HHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHH
Confidence 34445567777764577899999999999999999988 679999998433 23468999999998721
Q ss_pred -------CCCCEEEechhhhcCC---------hHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 78 -------PNGDAILIKWILHDWS---------DEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 78 -------~~~D~i~~~~~l~~~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+..|+|++........ .+....+++.+.++|||||.+++...
T Consensus 83 ~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 83 ALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 2239999854322111 11124678999999999999998553
No 182
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.52 E-value=1.4e-14 Score=111.32 Aligned_cols=104 Identities=14% Similarity=0.206 Sum_probs=82.2
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCC-----------------CCceEE
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEY-----------------PGVKHV 69 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~-----------------~~i~~~ 69 (184)
...++..+. ..+..+|||+|||+|.++..+++. .+..+++++|. +.+++.|+++ +++++.
T Consensus 94 ~~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 94 INMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 566777777 888899999999999999999998 57789999999 8888877652 479999
Q ss_pred EcccCcc---CCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 70 GGDMFQS---VPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 70 ~~d~~~~---~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.+|+.+. ++. . |+|++... .+. .+++++.+.|+|||++++..+.
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~-----~~~--~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDML-----NPH--VTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ESCTTCCC-------EEEEEECSS-----STT--TTHHHHGGGEEEEEEEEEEESS
T ss_pred ECChHHcccccCCCCeeEEEECCC-----CHH--HHHHHHHHhcCCCcEEEEEeCC
Confidence 9999872 333 3 99998432 221 3799999999999999987653
No 183
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.52 E-value=6.2e-14 Score=104.22 Aligned_cols=107 Identities=15% Similarity=0.025 Sum_probs=77.3
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC--C------CceEE--EcccCccCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY--P------GVKHV--GGDMFQSVP 78 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~--~------~i~~~--~~d~~~~~~ 78 (184)
...+.+... +.+..+|||+|||+|.++..++++ .+++++|++.|...+++. + ++.++ ++|+.+..+
T Consensus 63 L~~i~~~~~-~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~ 138 (265)
T 2oxt_A 63 LAWMEERGY-VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPV 138 (265)
T ss_dssp HHHHHHHTS-CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCC
T ss_pred HHHHHHcCC-CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCC
Confidence 344555533 677889999999999999999887 689999994465444332 2 68999 899987223
Q ss_pred CC-CEEEechhhhcCChHH-----HHHHHHHHHhhCCCCc--EEEEEeee
Q 030025 79 NG-DAILIKWILHDWSDEH-----CLKLLKNCHKSIPEGG--KVIVVESV 120 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG--~l~i~~~~ 120 (184)
.. |+|++..+ ++.+.+. ...+|+.+.++|+||| .+++....
T Consensus 139 ~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 139 ERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 33 99999877 4433221 1247999999999999 99986543
No 184
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=5.6e-15 Score=107.10 Aligned_cols=99 Identities=18% Similarity=0.146 Sum_probs=79.2
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCcc---CC-----CC-
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQS---VP-----NG- 80 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~---~~-----~~- 80 (184)
..+..+|||||||+|..+..+++..| ..+++++|+ +.+++.++++ ++++++.+|+.+. .. ..
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34578999999999999999999887 789999999 8888888663 4699999998652 21 33
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecC
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLP 122 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 122 (184)
|+|++.... .....+++++.++|+|||++++.+....
T Consensus 142 D~v~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 142 DLIYIDADK-----ANTDLYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp EEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred cEEEECCCH-----HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 999975542 2334789999999999999999776653
No 185
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=4.6e-14 Score=106.01 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=84.6
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCcc
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQS 76 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~ 76 (184)
+..++..+++.++ ..+..+|||+|||+|.++..+++. |..+++++|+ +.+++.|+++ ++++++++|+.++
T Consensus 108 te~lv~~~l~~~~-~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~ 185 (284)
T 1nv8_A 108 TEELVELALELIR-KYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP 185 (284)
T ss_dssp HHHHHHHHHHHHH-HHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG
T ss_pred HHHHHHHHHHHhc-ccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh
Confidence 3456667777665 446679999999999999999999 8999999999 8999888764 2499999999884
Q ss_pred C-CCC---CEEEechhhh-----------cCChH------HHHHHHHHHH-hhCCCCcEEEE
Q 030025 77 V-PNG---DAILIKWILH-----------DWSDE------HCLKLLKNCH-KSIPEGGKVIV 116 (184)
Q Consensus 77 ~-~~~---D~i~~~~~l~-----------~~~~~------~~~~~l~~~~-~~L~pgG~l~i 116 (184)
. +.. |+|+++-... |-+.. +...+++++. +.|+|||++++
T Consensus 186 ~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 186 FKEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp GGGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred cccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 3 346 9999962111 22211 1126899999 99999999998
No 186
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=8.2e-15 Score=101.58 Aligned_cols=112 Identities=9% Similarity=0.010 Sum_probs=83.6
Q ss_pred cHHhHHHHHHHhcC-CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----C-CceEEEcccCcc-
Q 030025 5 TTLVLQKILEAYKG-FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----P-GVKHVGGDMFQS- 76 (184)
Q Consensus 5 ~~~~~~~l~~~~~~-~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~-~i~~~~~d~~~~- 76 (184)
...+.+.+++.+.. +++..+|||+|||+|.++..+++..+. ++++|. +.+++.++++ . +++++.+|+.+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 101 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFL 101 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHH
Confidence 44556666666651 236789999999999999999998654 999999 8899888764 2 799999998762
Q ss_pred --CC----CCCEEEechhhhcCChHHHHHHHHHHH--hhCCCCcEEEEEeeecC
Q 030025 77 --VP----NGDAILIKWILHDWSDEHCLKLLKNCH--KSIPEGGKVIVVESVLP 122 (184)
Q Consensus 77 --~~----~~D~i~~~~~l~~~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~~ 122 (184)
.+ ..|+|++..+++ -..+ .+++.+. ++|+|||.+++......
T Consensus 102 ~~~~~~~~~~D~i~~~~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 102 PEAKAQGERFTVAFMAPPYA-MDLA---ALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHTTCCEEEEEECCCTT-SCTT---HHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HhhhccCCceEEEEECCCCc-hhHH---HHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 11 239999987776 2222 4566666 99999999999776543
No 187
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.51 E-value=8.9e-15 Score=106.09 Aligned_cols=108 Identities=8% Similarity=0.086 Sum_probs=82.0
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC--------CCceEEEcccCc--
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY--------PGVKHVGGDMFQ-- 75 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~--------~~i~~~~~d~~~-- 75 (184)
+...++...+ ..+..+|||||||+|..+..+++..+ ..+++++|. +.+++.|+++ ++++++.+|+.+
T Consensus 44 ~l~~l~~~~~-~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 44 LLTTLAATTN-GNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHHSC-CTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHHhhC-CCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 3444444443 33445999999999999999999864 789999999 8898888663 369999999876
Q ss_pred -cC-CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 76 -SV-PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 76 -~~-~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
.+ +.. |+|++..... ....+++++.++|+|||.+++.+..+
T Consensus 123 ~~~~~~~fD~V~~d~~~~-----~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSPM-----DLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp GGSCTTCEEEEEECCCTT-----THHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHhcCCCcCeEEEcCcHH-----HHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 23 233 9999865433 22468999999999999999966554
No 188
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.51 E-value=5.4e-14 Score=105.09 Aligned_cols=104 Identities=15% Similarity=0.009 Sum_probs=75.9
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC--C------CceEE--EcccCc-cCC
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY--P------GVKHV--GGDMFQ-SVP 78 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~--~------~i~~~--~~d~~~-~~~ 78 (184)
..+.+... +.+..+|||+|||+|.++..++++ .+++++|++.|...+++. + ++.++ ++|+.+ + +
T Consensus 72 ~~i~~~~~-~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~ 146 (276)
T 2wa2_A 72 AWIDERGG-VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME-P 146 (276)
T ss_dssp HHHHHTTS-CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-C
T ss_pred HHHHHcCC-CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-C
Confidence 34444433 667889999999999999999987 589999994465444332 2 78999 999887 4 3
Q ss_pred CC-CEEEechhhhcCChH----H-HHHHHHHHHhhCCCCc--EEEEEee
Q 030025 79 NG-DAILIKWILHDWSDE----H-CLKLLKNCHKSIPEGG--KVIVVES 119 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~~~----~-~~~~l~~~~~~L~pgG--~l~i~~~ 119 (184)
.. |+|++..+ ++.+.+ . ...+|+.+.++||||| .+++...
T Consensus 147 ~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 147 FQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 33 99999877 443322 1 1247999999999999 9988554
No 189
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.51 E-value=2.2e-14 Score=104.27 Aligned_cols=106 Identities=17% Similarity=0.195 Sum_probs=84.8
Q ss_pred HHhHHHHHHHhc-CCCCCCeEEEecCCcChHHHHHHhhCC------CCeEEEeec-hhHhhhCCCC-----------CCc
Q 030025 6 TLVLQKILEAYK-GFEHIKQLVDVGGSLGNTLKAITSKYP------HIKGINFDL-PHVIQHSPEY-----------PGV 66 (184)
Q Consensus 6 ~~~~~~l~~~~~-~~~~~~~ilDiG~G~G~~~~~l~~~~~------~~~~~~~D~-~~~~~~a~~~-----------~~i 66 (184)
..+...+++.+. ...+..+|||||||+|..+..+++..+ ..+++++|. +.+++.++++ +++
T Consensus 68 p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 68 PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 345566777773 266788999999999999999998754 369999999 8888887653 479
Q ss_pred eEEEcccCccCCC--C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 67 KHVGGDMFQSVPN--G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 67 ~~~~~d~~~~~~~--~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+..+|..+.++. . |+|++..+++++. +++.+.|||||++++.-.
T Consensus 148 ~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 148 LIVEGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred EEEECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 9999999875443 3 9999999998764 568899999999999653
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.50 E-value=4.5e-14 Score=106.48 Aligned_cols=99 Identities=20% Similarity=0.283 Sum_probs=74.9
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----------CCceEEEcccCccC---CCC-CEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----------PGVKHVGGDMFQSV---PNG-DAI 83 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~i~~~~~d~~~~~---~~~-D~i 83 (184)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|..+.. ... |+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4678999999999999999999877789999999 8899887652 58999999988732 223 999
Q ss_pred EechhhhcCChHHH--HHHHHHHHhhCCCCcEEEEEe
Q 030025 84 LIKWILHDWSDEHC--LKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 84 ~~~~~l~~~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 118 (184)
++...-..-+.... ..+++.+++.|+|||++++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99655432222111 479999999999999999864
No 191
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.50 E-value=4.7e-14 Score=103.31 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=81.6
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCcc---C
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQS---V 77 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~---~ 77 (184)
..+...+. ..+..+|||||||+|..+..+++..+ ..+++++|. +.+++.++++ +++.++.+|+.+. .
T Consensus 50 ~~l~~l~~-~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 50 QFLNILTK-ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVL 128 (239)
T ss_dssp HHHHHHHH-HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHH-hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHH
Confidence 33333333 45678999999999999999999986 689999999 8888887764 3489999998651 1
Q ss_pred ---------------C-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 78 ---------------P-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 78 ---------------~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
+ .. |+|++..... ....+++++.+.|+|||++++.+...
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HhhcccccccccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 1 33 9999875443 23478999999999999999976544
No 192
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.50 E-value=7.5e-15 Score=104.97 Aligned_cols=111 Identities=10% Similarity=0.021 Sum_probs=82.8
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--------CCceEEEcccCc-c
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--------PGVKHVGGDMFQ-S 76 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------~~i~~~~~d~~~-~ 76 (184)
.+...+++.+....+..+|||+|||+|.++..++++. ..+++++|+ +.+++.|+++ ++++++.+|+.+ .
T Consensus 39 ~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 39 RVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL 117 (201)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH
Confidence 4455566655411256899999999999999877764 358999999 8999988763 478999999876 2
Q ss_pred C----CC-CCEEEechhhhcCChHHHHHHHHHH--HhhCCCCcEEEEEeeec
Q 030025 77 V----PN-GDAILIKWILHDWSDEHCLKLLKNC--HKSIPEGGKVIVVESVL 121 (184)
Q Consensus 77 ~----~~-~D~i~~~~~l~~~~~~~~~~~l~~~--~~~L~pgG~l~i~~~~~ 121 (184)
. .. .|+|++...++ ... ...+++.+ .++|+|||.+++.....
T Consensus 118 ~~~~~~~~fD~I~~~~~~~-~~~--~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 118 KQPQNQPHFDVVFLDPPFH-FNL--AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp TSCCSSCCEEEEEECCCSS-SCH--HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HhhccCCCCCEEEECCCCC-Ccc--HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 1 24 59999987754 333 34788888 66899999999876544
No 193
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.50 E-value=2.9e-13 Score=95.92 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=78.4
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC---------CeEEEeechhHhhhCCCCCCceEE-EcccCc-c-
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH---------IKGINFDLPHVIQHSPEYPGVKHV-GGDMFQ-S- 76 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~---------~~~~~~D~~~~~~~a~~~~~i~~~-~~d~~~-~- 76 (184)
..++...+..+.+..+|||+|||+|.++..++++.+. .+++++|++.+. ..+++++. .+|+.+ +
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHH
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHH
Confidence 3445555654577899999999999999999999764 799999994431 23678999 999876 2
Q ss_pred -------CCC-C-CEEEechhhhcC----ChHH-----HHHHHHHHHhhCCCCcEEEEEee
Q 030025 77 -------VPN-G-DAILIKWILHDW----SDEH-----CLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 77 -------~~~-~-D~i~~~~~l~~~----~~~~-----~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++. . |+|++..+++.. .+.. ...+++++.++|+|||++++...
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 222 3 999986554432 2221 13789999999999999999764
No 194
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.50 E-value=2.2e-14 Score=109.84 Aligned_cols=107 Identities=18% Similarity=0.224 Sum_probs=80.8
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCC-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVP- 78 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~- 78 (184)
..+.+.+... ..+..+|||||||+|.++..+++. +..+++++|.+.+++.|++. ++++++.+|+.+ +++
T Consensus 26 y~~ai~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 103 (328)
T 1g6q_1 26 YRNAIIQNKD-LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPF 103 (328)
T ss_dssp HHHHHHHHHH-HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSS
T ss_pred HHHHHHhhHh-hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCC
Confidence 3445555555 567889999999999999988886 44699999996577776653 469999999987 555
Q ss_pred CC-CEEEechhhhcCC-hHHHHHHHHHHHhhCCCCcEEEE
Q 030025 79 NG-DAILIKWILHDWS-DEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~-~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
.. |+|++..+.+++. ......+++.+.++|+|||.++.
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 33 9999976555432 22234789999999999999974
No 195
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.50 E-value=1.5e-14 Score=106.41 Aligned_cols=94 Identities=16% Similarity=0.370 Sum_probs=73.1
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC--------------CCCceEEEcccCcc----CCCC
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE--------------YPGVKHVGGDMFQS----VPNG 80 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~--------------~~~i~~~~~d~~~~----~~~~ 80 (184)
++..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .+++.++.+|+.+. ++..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3567999999999999999999999899999999 888876632 35799999999862 3333
Q ss_pred --CEEEechhhhcCChHHH-----------HHHHHHHHhhCCCCcEEEEEe
Q 030025 81 --DAILIKWILHDWSDEHC-----------LKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 81 --D~i~~~~~l~~~~~~~~-----------~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|.|++.. +++.. ..+++++.++|+|||.|++..
T Consensus 128 ~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 7776432 32210 268999999999999999953
No 196
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.49 E-value=1.2e-13 Score=105.12 Aligned_cols=110 Identities=13% Similarity=0.120 Sum_probs=82.4
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c-CC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S-VP 78 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~-~~ 78 (184)
...+...+. ..+..+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++ .++.++.+|+.+ + .+
T Consensus 107 s~l~~~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~ 185 (315)
T 1ixk_A 107 SMYPPVALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELN 185 (315)
T ss_dssp HHHHHHHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGC
T ss_pred HHHHHHHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccccc
Confidence 344455566 77889999999999999999999864 489999999 8888887764 478999999987 3 23
Q ss_pred CC-CEEEec------hhhhcCCh-------H-------HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 79 NG-DAILIK------WILHDWSD-------E-------HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 79 ~~-D~i~~~------~~l~~~~~-------~-------~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.. |+|++. .++++.++ . ....+++++.+.|||||++++++-
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 33 999883 23332221 1 114789999999999999999664
No 197
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.49 E-value=2.1e-13 Score=102.28 Aligned_cols=108 Identities=12% Similarity=0.056 Sum_probs=78.6
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec--hhHhhhCCCC----------------CCce
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL--PHVIQHSPEY----------------PGVK 67 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~--~~~~~~a~~~----------------~~i~ 67 (184)
..+.+.+.+... ..+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++ +++.
T Consensus 65 ~~l~~~l~~~~~-~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~ 142 (281)
T 3bzb_A 65 RALADTLCWQPE-LIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK 142 (281)
T ss_dssp HHHHHHHHHCGG-GTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE
T ss_pred HHHHHHHHhcch-hcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE
Confidence 345555665554 5567899999999999999888763 348999998 4677665432 2677
Q ss_pred EEEcccCc---cC-----CCC-CEEEechhhhcCChHHHHHHHHHHHhhCC---C--CcEEEEE
Q 030025 68 HVGGDMFQ---SV-----PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIP---E--GGKVIVV 117 (184)
Q Consensus 68 ~~~~d~~~---~~-----~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~---p--gG~l~i~ 117 (184)
+...|..+ .+ ... |+|++..+++|.++. ..+++.+.++|+ | ||++++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~--~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAH--DALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGH--HHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHH--HHHHHHHHHHhcccCCCCCCEEEEE
Confidence 77555432 11 233 999999999986554 478999999999 9 9987773
No 198
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=4.1e-14 Score=107.14 Aligned_cols=98 Identities=18% Similarity=0.342 Sum_probs=77.8
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc---cCC-CC-CEEEechhh
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ---SVP-NG-DAILIKWIL 89 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~---~~~-~~-D~i~~~~~l 89 (184)
..+|||||||+|.++..+++.+|..+++++|+ +.+++.|+++ ++++++.+|..+ ..+ .. |+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 45999999999999999999999999999999 9999988763 579999999876 233 23 999986543
Q ss_pred hcCChHH--HHHHHHHHHhhCCCCcEEEEEee
Q 030025 90 HDWSDEH--CLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 90 ~~~~~~~--~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+...... ..++++++++.|+|||++++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3211111 13789999999999999998664
No 199
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.49 E-value=1.6e-13 Score=100.73 Aligned_cols=101 Identities=18% Similarity=0.218 Sum_probs=81.7
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccC-CC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSV-PN 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~-~~ 79 (184)
...++..+. ..+..+|||+|||+|.++..+++. ..+++++|. +.+++.++++ +++++..+|+.+.. +.
T Consensus 80 ~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 80 SFYIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 345666666 778899999999999999999998 679999999 8888887653 57899999998844 43
Q ss_pred -C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 80 -G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 80 -~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. |+|++. .+++ ..+++++.+.|+|||++++..+
T Consensus 157 ~~~D~v~~~-----~~~~--~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFVD-----VREP--WHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TCBSEEEEC-----SSCG--GGGHHHHHHHBCTTCEEEEEES
T ss_pred CcccEEEEC-----CcCH--HHHHHHHHHHcCCCCEEEEEeC
Confidence 3 999973 3333 3679999999999999999764
No 200
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.48 E-value=3.7e-14 Score=101.84 Aligned_cols=97 Identities=13% Similarity=0.172 Sum_probs=77.6
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc--cCCC-CCEEEech
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ--SVPN-GDAILIKW 87 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~--~~~~-~D~i~~~~ 87 (184)
.+..+|||||||+|..+..+++..+ ..+++++|+ +.+++.++++ ++++++.+|..+ +... .|+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 3568999999999999999999887 789999999 8899888764 368999999875 2222 59998864
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
... ....+++++.++|+|||.+++.+...
T Consensus 135 ~~~-----~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 DVF-----NGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp TTS-----CHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred Chh-----hhHHHHHHHHHhcCCCeEEEEECccc
Confidence 321 23478999999999999999866544
No 201
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.48 E-value=9.3e-16 Score=112.38 Aligned_cols=145 Identities=12% Similarity=0.019 Sum_probs=101.1
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPN 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~ 79 (184)
...+...+....+..+|||+|||+|..+..+++.. .+++++|+ +.+++.++++ ++++++.+|+.+ +...
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 143 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFL 143 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGC
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccC
Confidence 44455544323367899999999999999999874 79999999 8899888764 479999999987 4223
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHH
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTT 158 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (184)
. |+|++..++++..+.. ..+.+++++|+|||.+++......... ... .-....+.+++.+
T Consensus 144 ~~D~v~~~~~~~~~~~~~--~~~~~~~~~L~pgG~~i~~~~~~~~~~---------~~~--------~lp~~~~~~~~~~ 204 (241)
T 3gdh_A 144 KADVVFLSPPWGGPDYAT--AETFDIRTMMSPDGFEIFRLSKKITNN---------IVY--------FLPRNADIDQVAS 204 (241)
T ss_dssp CCSEEEECCCCSSGGGGG--SSSBCTTTSCSSCHHHHHHHHHHHCSC---------EEE--------EEETTBCHHHHHH
T ss_pred CCCEEEECCCcCCcchhh--hHHHHHHhhcCCcceeHHHHHHhhCCc---------eEE--------ECCCCCCHHHHHH
Confidence 3 9999999999876553 367789999999999666332110000 000 0012236778888
Q ss_pred HHHHcCCceeEEEeec
Q 030025 159 LATEAGFSGIRFVCFF 174 (184)
Q Consensus 159 ~l~~aGf~~i~~~~~~ 174 (184)
+++..|...++.....
T Consensus 205 ~l~~~g~~~i~~~~~~ 220 (241)
T 3gdh_A 205 LAGPGGQVEIEQNFLN 220 (241)
T ss_dssp TTCTTCCEEEEEEEET
T ss_pred HhccCCCEEEEehhhc
Confidence 8888776666554443
No 202
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.48 E-value=3.9e-14 Score=104.36 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=78.4
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc--c-C------CCC
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ--S-V------PNG 80 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~--~-~------~~~ 80 (184)
..+..+|||||||+|..+..+++..| ..+++++|. +.+++.|+++ ++++++.+|+.+ + . ...
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34578999999999999999999987 789999999 8898888763 468999999875 2 2 233
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
|+|++..... ....+++++.++|+|||.+++.+..+
T Consensus 157 fD~V~~d~~~~-----~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 157 YDFIFVDADKD-----NYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp BSEEEECSCST-----THHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEEEcCchH-----HHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 9999865422 23478999999999999999866544
No 203
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.48 E-value=8.4e-14 Score=101.04 Aligned_cols=106 Identities=17% Similarity=0.138 Sum_probs=84.1
Q ss_pred HhHHHHHHHhc-CCCCCCeEEEecCCcChHHHHHHhhC-----CCCeEEEeec-hhHhhhCCCC-----------CCceE
Q 030025 7 LVLQKILEAYK-GFEHIKQLVDVGGSLGNTLKAITSKY-----PHIKGINFDL-PHVIQHSPEY-----------PGVKH 68 (184)
Q Consensus 7 ~~~~~l~~~~~-~~~~~~~ilDiG~G~G~~~~~l~~~~-----~~~~~~~~D~-~~~~~~a~~~-----------~~i~~ 68 (184)
.+...+++.+. ...+..+|||||||+|..+..+++.. |..+++++|. +.+++.++++ +++.+
T Consensus 65 ~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 144 (227)
T 2pbf_A 65 HMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKI 144 (227)
T ss_dssp HHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEE
Confidence 34456666662 26678899999999999999999986 5679999999 8888887653 47999
Q ss_pred EEcccCccC-----C-C-CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 69 VGGDMFQSV-----P-N-GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 69 ~~~d~~~~~-----~-~-~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+.+|..+.. + . .|+|++..+++++ ++++.+.|+|||++++.-..
T Consensus 145 ~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 145 IHKNIYQVNEEEKKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EECCGGGCCHHHHHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred EECChHhcccccCccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 999998732 2 2 3999999998865 46788999999999997653
No 204
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.46 E-value=6.1e-14 Score=100.27 Aligned_cols=112 Identities=11% Similarity=0.027 Sum_probs=83.0
Q ss_pred cHHhHHHHHHHhcCCC-CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-
Q 030025 5 TTLVLQKILEAYKGFE-HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ- 75 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~-~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~- 75 (184)
...+...+++.+. .. +..+|||+|||+|.++..++++.. .+++++|+ +.|++.++++ ++++++.+|+.+
T Consensus 38 ~~~~~~~l~~~l~-~~~~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~ 115 (202)
T 2fpo_A 38 TDRVRETLFNWLA-PVIVDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF 115 (202)
T ss_dssp CHHHHHHHHHHHH-HHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHH-hhcCCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH
Confidence 3445556666655 32 568999999999999998887742 48999999 8999988764 479999999876
Q ss_pred -cCC-CC-CEEEechhhhcCChHHHHHHHHHHHh--hCCCCcEEEEEeeec
Q 030025 76 -SVP-NG-DAILIKWILHDWSDEHCLKLLKNCHK--SIPEGGKVIVVESVL 121 (184)
Q Consensus 76 -~~~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~--~L~pgG~l~i~~~~~ 121 (184)
+.+ .. |+|++...++ .... ..+++.+.+ +|+|||.+++.....
T Consensus 116 ~~~~~~~fD~V~~~~p~~-~~~~--~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 116 LAQKGTPHNIVFVDPPFR-RGLL--EETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HSSCCCCEEEEEECCSSS-TTTH--HHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HhhcCCCCCEEEECCCCC-CCcH--HHHHHHHHhcCccCCCcEEEEEECCC
Confidence 332 23 9999987744 3332 367888866 599999999876543
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.45 E-value=2e-13 Score=98.92 Aligned_cols=104 Identities=19% Similarity=0.126 Sum_probs=81.6
Q ss_pred hHHHHHHHhc-CCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC-----------CCceEEEccc
Q 030025 8 VLQKILEAYK-GFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY-----------PGVKHVGGDM 73 (184)
Q Consensus 8 ~~~~l~~~~~-~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-----------~~i~~~~~d~ 73 (184)
....+++.+. ...+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .++.+..+|.
T Consensus 63 ~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 63 MHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG 142 (226)
T ss_dssp HHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc
Confidence 4445666653 25677899999999999999999884 5679999999 8888887653 3799999998
Q ss_pred Ccc-CCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 74 FQS-VPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 74 ~~~-~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
... .+. . |+|++..+++++ ++++.+.|||||++++...
T Consensus 143 ~~~~~~~~~fD~i~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 143 RMGYAEEAPYDAIHVGAAAPVV--------PQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp GGCCGGGCCEEEEEECSBBSSC--------CHHHHHTEEEEEEEEEEES
T ss_pred ccCcccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEe
Confidence 763 222 3 999999888765 4578899999999999754
No 206
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.45 E-value=3.1e-13 Score=102.41 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=70.2
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-----hhHhhhCC--CC--CCceEEEc-ccCc-cCCCCCEEEech
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-----PHVIQHSP--EY--PGVKHVGG-DMFQ-SVPNGDAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-----~~~~~~a~--~~--~~i~~~~~-d~~~-~~~~~D~i~~~~ 87 (184)
+++..+|||+|||+|.++..++++ .+++++|. +.+++.++ .. +++.++++ |+.+ +....|+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 567789999999999999999987 47899997 43333322 12 57899999 8876 333349999976
Q ss_pred hhh---cCChHH-HHHHHHHHHhhCCCCcEEEEEe
Q 030025 88 ILH---DWSDEH-CLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 88 ~l~---~~~~~~-~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+++ +..+.. ...+|+.+.++|||||.+++..
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 653 222222 1257999999999999998843
No 207
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.45 E-value=9.5e-14 Score=104.36 Aligned_cols=107 Identities=19% Similarity=0.299 Sum_probs=82.0
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ- 75 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~- 75 (184)
+..+++.+++.+. ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++. ++++++.+|+.+
T Consensus 13 d~~i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 13 NPLIINSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp CHHHHHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 5567889999988 8888999999999999999999984 58999999 8888877653 478999999987
Q ss_pred cCCCCCEEEechhhhcCChHHHHHHHH--------------HH--HhhCCCCcEEE
Q 030025 76 SVPNGDAILIKWILHDWSDEHCLKLLK--------------NC--HKSIPEGGKVI 115 (184)
Q Consensus 76 ~~~~~D~i~~~~~l~~~~~~~~~~~l~--------------~~--~~~L~pgG~l~ 115 (184)
+++..|+|+++...+ +..+....+++ ++ +++++|||+++
T Consensus 90 ~~~~fD~vv~nlpy~-~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLPFFDTCVANLPYQ-ISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCCCCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cchhhcEEEEecCcc-cchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 666559999865443 33333333432 22 36899999764
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=9.6e-13 Score=102.43 Aligned_cols=95 Identities=8% Similarity=-0.047 Sum_probs=77.3
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccCC----CC-CEEEechh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSVP----NG-DAILIKWI 88 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~~----~~-D~i~~~~~ 88 (184)
+..+|||+| |+|.++..+++..+..+++++|+ +.+++.|+++ .+++++.+|+.+.++ .. |+|++..+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 568999999 99999999999887789999999 9999988764 379999999987433 23 99999876
Q ss_pred hhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 89 LHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 89 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++... ...+++++.+.|+|||++++.+.
T Consensus 251 ~~~~~---~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 251 ETLEA---IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp SSHHH---HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CchHH---HHHHHHHHHHHcccCCeEEEEEE
Confidence 65432 35899999999999996544443
No 209
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.43 E-value=8.4e-14 Score=101.62 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=78.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc---cC--C---CC-C
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ---SV--P---NG-D 81 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~---~~--~---~~-D 81 (184)
.+..+|||||||+|..+..+++..+ ..+++++|. +.+++.|+++ ++++++.+|+.+ .+ + .. |
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3568999999999999999999876 689999999 8888888753 468999999754 11 1 33 9
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecC
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLP 122 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 122 (184)
+|++.... +....+++++.++|+|||++++.+..+.
T Consensus 151 ~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 99986542 2335789999999999999999775543
No 210
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.43 E-value=8.1e-14 Score=101.19 Aligned_cols=98 Identities=13% Similarity=0.218 Sum_probs=78.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCcc---CC-----CC-
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQS---VP-----NG- 80 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~---~~-----~~- 80 (184)
..+..+|||||||+|..+..+++..+ ..+++++|. +.+++.++++ ++++++.+|+.+. ++ ..
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999999876 789999999 8888887653 5799999998652 21 33
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
|+|++.... .....+++++.++|+|||.+++.+...
T Consensus 147 D~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDADK-----ENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp EEEEECSCS-----TTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred cEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 999986542 223478999999999999999977554
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.43 E-value=1.2e-13 Score=103.70 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=81.8
Q ss_pred HHHHHHHhcC--CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCc
Q 030025 9 LQKILEAYKG--FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQ 75 (184)
Q Consensus 9 ~~~l~~~~~~--~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~ 75 (184)
..+++.+++. .+++.+|||||||+|..+..+++..+..+++++|+ +.+++.++++ ++++++.+|..+
T Consensus 64 Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 64 YHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp HHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 3445554431 34678999999999999999998877889999999 8888877542 578999999876
Q ss_pred c---CCCC-CEEEechhhhcCChHHH--HHHHHHHHhhCCCCcEEEEEe
Q 030025 76 S---VPNG-DAILIKWILHDWSDEHC--LKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 76 ~---~~~~-D~i~~~~~l~~~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 118 (184)
. .+.. |+|++....++.+.... .++++.+++.|+|||.+++..
T Consensus 144 ~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 144 FLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp HHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 2 2333 99998654332222211 478999999999999999853
No 212
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.42 E-value=1.3e-13 Score=105.75 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=81.1
Q ss_pred HHHHHHHhc--CCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCc
Q 030025 9 LQKILEAYK--GFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQ 75 (184)
Q Consensus 9 ~~~l~~~~~--~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~ 75 (184)
..+++.+++ ..++..+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|+.+
T Consensus 106 y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 106 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 344555443 134678999999999999999999877889999999 8898887653 579999999876
Q ss_pred c---CC-CC-CEEEechhhhcCChH--HHHHHHHHHHhhCCCCcEEEEE
Q 030025 76 S---VP-NG-DAILIKWILHDWSDE--HCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 76 ~---~~-~~-D~i~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
. .+ .. |+|++...-..-..+ ....++++++++|+|||++++.
T Consensus 186 ~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 186 FLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp HHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 2 22 23 999985442111111 1247999999999999999985
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=1.3e-12 Score=101.78 Aligned_cols=134 Identities=13% Similarity=0.087 Sum_probs=99.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ- 75 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~- 75 (184)
...++..++... +.+..+|||+|||+|.++..++...+..+++++|+ +.|++.|+++ ++++++++|+.+
T Consensus 203 ~~~la~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 445566666655 57789999999999999999999877669999999 9999988764 378999999998
Q ss_pred cCC-CC-CEEEechhhhcCC------hHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCC
Q 030025 76 SVP-NG-DAILIKWILHDWS------DEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPG 147 (184)
Q Consensus 76 ~~~-~~-D~i~~~~~l~~~~------~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (184)
+.+ .. |+|+++-.++... ..-...+++.+++.| ||.+++...
T Consensus 281 ~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---------------------------- 330 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---------------------------- 330 (373)
T ss_dssp GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES----------------------------
T ss_pred CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC----------------------------
Confidence 544 33 9999976654321 111247889999988 555554321
Q ss_pred ccccCHHHHHHHHHHcCCceeEEEeec
Q 030025 148 GKERTKHEFTTLATEAGFSGIRFVCFF 174 (184)
Q Consensus 148 ~~~~~~~~~~~~l~~aGf~~i~~~~~~ 174 (184)
+.+.+.+.+++.||+..+.....
T Consensus 331 ----~~~~~~~~~~~~G~~~~~~~~~~ 353 (373)
T 3tm4_A 331 ----EKKAIEEAIAENGFEIIHHRVIG 353 (373)
T ss_dssp ----CHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ----CHHHHHHHHHHcCCEEEEEEEEE
Confidence 35667788999999988876664
No 214
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=2.5e-13 Score=101.42 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=80.6
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCcc-CCCC-CEEEechhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQS-VPNG-DAILIKWIL 89 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~-~~~~-D~i~~~~~l 89 (184)
+.+..+|||+|||+|.++..+++..+..+++++|. +.+++.++++ .++.++.+|+.+. .... |+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 67788999999999999999999987889999999 8999888763 5789999999874 3223 999987654
Q ss_pred hcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 90 HDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
....+++++.+.|+|||.+++.....
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 12367999999999999999987654
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.42 E-value=2e-13 Score=103.44 Aligned_cols=111 Identities=15% Similarity=0.201 Sum_probs=80.3
Q ss_pred hHHHHHHHhc--CCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccC
Q 030025 8 VLQKILEAYK--GFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMF 74 (184)
Q Consensus 8 ~~~~l~~~~~--~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~ 74 (184)
...+++.+++ ..++..+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|..
T Consensus 80 ~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~ 159 (304)
T 2o07_A 80 SYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF 159 (304)
T ss_dssp HHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHH
Confidence 3445555443 134678999999999999999999877789999999 8888877652 57999999987
Q ss_pred c--cC-CCC-CEEEechhhhcCChH--HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 75 Q--SV-PNG-DAILIKWILHDWSDE--HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 75 ~--~~-~~~-D~i~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+ +. +.. |+|++....+.-+.. ...+++++++++|+|||.+++..
T Consensus 160 ~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 160 EFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp HHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 6 22 233 999986544321111 12468999999999999999855
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.42 E-value=1.8e-13 Score=100.13 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=78.0
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc--c-C------CCC
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ--S-V------PNG 80 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~--~-~------~~~ 80 (184)
..+..+|||||||+|..+..+++..| ..+++++|. +.+++.|+++ ++++++.+|..+ + + ...
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 44578999999999999999999976 789999999 8888888653 468999999875 2 2 233
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
|+|++.... .....+++++.++|+|||.+++.+..+
T Consensus 148 fD~I~~d~~~-----~~~~~~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 148 YDFGFVDADK-----PNYIKYHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp EEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECTTG
T ss_pred cCEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEecCCc
Confidence 999986432 234578999999999999998866443
No 217
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.40 E-value=5e-13 Score=96.84 Aligned_cols=96 Identities=11% Similarity=0.019 Sum_probs=80.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-cCCCC-CEEEechhhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-SVPNG-DAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~~~~~-D~i~~~~~l~ 90 (184)
.+++.+|||||||+|-++..+. +..+++++|+ +.+++.+++. .+..+...|... +.+.. |++++.-++|
T Consensus 103 ~~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 103 AETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp SCCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHH
Confidence 4568899999999999998877 7889999999 9999988764 567889999987 55544 9999999999
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
++++.+....+ ++.+.|+|+|.++-..
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 99877665666 8899999998877655
No 218
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.40 E-value=7.8e-14 Score=114.08 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=81.1
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc---cCCC--CCEEEec
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ---SVPN--GDAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~---~~~~--~D~i~~~ 86 (184)
++++.+|||||||+|.++..|+++ +.+++|+|. +.+++.|+.+ .+++|.++++++ ..+. .|+|+|.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 346789999999999999999997 679999999 8888877653 358999999876 2332 3999999
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
.++||+++++....+..+.+.|+++|+.++.....
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99999988765555667788888888877766543
No 219
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.40 E-value=9.6e-13 Score=93.66 Aligned_cols=88 Identities=13% Similarity=0.101 Sum_probs=68.4
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCccCCCC-CEEEechhhhcCChH
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQSVPNG-DAILIKWILHDWSDE 95 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~~~~~~-D~i~~~~~l~~~~~~ 95 (184)
..+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++ .+++++.+|+.+. +.. |+|+++.++|++.+.
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~-~~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEI-SGKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGC-CCCEEEEEECCCC------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHC-CCCeeEEEECCCchhccCc
Confidence 456789999999999999999887 4457999999 8999888765 4899999999872 334 999999999998754
Q ss_pred HHHHHHHHHHhhC
Q 030025 96 HCLKLLKNCHKSI 108 (184)
Q Consensus 96 ~~~~~l~~~~~~L 108 (184)
....+++++.+.+
T Consensus 127 ~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 127 SDRAFIDKAFETS 139 (200)
T ss_dssp -CHHHHHHHHHHE
T ss_pred hhHHHHHHHHHhc
Confidence 4457899999998
No 220
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.39 E-value=2.5e-12 Score=98.54 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=78.9
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------C--CceEEEcccCccC--
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------P--GVKHVGGDMFQSV-- 77 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~--~i~~~~~d~~~~~-- 77 (184)
...+.+.+....+..+|||+|||+|.++..+++.. .+++++|+ +.+++.++++ . ++.++.+|+.+..
T Consensus 141 ~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~ 218 (332)
T 2igt_A 141 WEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQR 218 (332)
T ss_dssp HHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHH
Confidence 33444444212456799999999999999999864 49999999 8899888764 2 4899999998721
Q ss_pred ----CC-CCEEEechhhhcC--------ChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 78 ----PN-GDAILIKWILHDW--------SDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 78 ----~~-~D~i~~~~~l~~~--------~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.. .|+|++.-..... ..+....+++++.++|+|||.+++....
T Consensus 219 ~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 219 EERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 22 3999984331110 1223458999999999999998876543
No 221
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.38 E-value=2.9e-13 Score=103.04 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=77.7
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC-----------CCCceEEEcccCcc---CCCC-CEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE-----------YPGVKHVGGDMFQS---VPNG-DAI 83 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----------~~~i~~~~~d~~~~---~~~~-D~i 83 (184)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.|++ .++++++.+|+.+. .+.. |+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4568999999999999999999877889999999 888887754 25799999998762 2233 999
Q ss_pred Eechhhhc-C-Ch-HH--HHHHHHHHHhhCCCCcEEEEEe
Q 030025 84 LIKWILHD-W-SD-EH--CLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 84 ~~~~~l~~-~-~~-~~--~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
++....+. . .+ .. ..++++++++.|+|||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99765543 0 11 11 2478999999999999999864
No 222
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=7e-12 Score=89.54 Aligned_cols=133 Identities=12% Similarity=0.007 Sum_probs=92.6
Q ss_pred HhHHHHHHHhc--CCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----C-CceEEEcccCccCC
Q 030025 7 LVLQKILEAYK--GFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----P-GVKHVGGDMFQSVP 78 (184)
Q Consensus 7 ~~~~~l~~~~~--~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~-~i~~~~~d~~~~~~ 78 (184)
.+...++..+. ...+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++ . +++++.+|+.+..+
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 111 (207)
T 1wy7_A 33 NAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNS 111 (207)
T ss_dssp HHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCC
T ss_pred HHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCC
Confidence 34444444332 13467899999999999999998873 348999999 8898887764 1 78999999987322
Q ss_pred CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHH
Q 030025 79 NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTT 158 (184)
Q Consensus 79 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (184)
..|+|++...+++........+++++.+.+ ||.+++ .. +. ..+.+.+.+
T Consensus 112 ~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~-~~--~~--------------------------~~~~~~~~~ 160 (207)
T 1wy7_A 112 RVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI-HL--AK--------------------------PEVRRFIEK 160 (207)
T ss_dssp CCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE-EE--CC--------------------------HHHHHHHHH
T ss_pred CCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE-Ee--CC--------------------------cCCHHHHHH
Confidence 349999998888775433357899999998 554433 21 01 012455667
Q ss_pred HHHHcCCceeEEE
Q 030025 159 LATEAGFSGIRFV 171 (184)
Q Consensus 159 ~l~~aGf~~i~~~ 171 (184)
.+++.||+...+.
T Consensus 161 ~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 161 FSWEHGFVVTHRL 173 (207)
T ss_dssp HHHHTTEEEEEEE
T ss_pred HHHHCCCeEEEEE
Confidence 8889998766544
No 223
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.38 E-value=4.5e-13 Score=100.48 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=74.7
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC----------------CCCceEEEcccCcc--CCCC
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE----------------YPGVKHVGGDMFQS--VPNG 80 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----------------~~~i~~~~~d~~~~--~~~~ 80 (184)
++..+|||||||+|..+..+++. +..+++++|+ +.+++.|++ .++++++.+|..+. .+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 46689999999999999999998 7789999999 888877652 35789999998652 1333
Q ss_pred -CEEEechhhhcCChHH--HHHHHHHHHhhCCCCcEEEEEe
Q 030025 81 -DAILIKWILHDWSDEH--CLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|+|++....+.-+... ..++++++++.|+|||.+++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999865532211111 1478999999999999999864
No 224
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.37 E-value=2.8e-12 Score=96.23 Aligned_cols=116 Identities=14% Similarity=0.099 Sum_probs=82.3
Q ss_pred CCCCCeEEEecCCc------ChHHHHHHhhCC-CCeEEEeechhHhhhCCCCCCceE-EEcccCc-cCCCC-CEEEechh
Q 030025 19 FEHIKQLVDVGGSL------GNTLKAITSKYP-HIKGINFDLPHVIQHSPEYPGVKH-VGGDMFQ-SVPNG-DAILIKWI 88 (184)
Q Consensus 19 ~~~~~~ilDiG~G~------G~~~~~l~~~~~-~~~~~~~D~~~~~~~a~~~~~i~~-~~~d~~~-~~~~~-D~i~~~~~ 88 (184)
+++..+|||+|||+ |. ..++++.+ ..+++++|++.. .+++++ +++|+.+ +++.. |+|++...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------v~~v~~~i~gD~~~~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------VSDADSTLIGDCATVHTANKWDLIISDMY 132 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------BCSSSEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------CCCCEEEEECccccCCccCcccEEEEcCC
Confidence 67888999999955 66 44566665 689999999333 257999 9999987 44444 99998643
Q ss_pred hhc--------CC-hHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 89 LHD--------WS-DEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 89 l~~--------~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
.+. .. ......+++++.+.|||||++++...... ...++.+.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~-----------------------------~~~~l~~~ 183 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS-----------------------------WNADLYKL 183 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS-----------------------------CCHHHHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC-----------------------------CHHHHHHH
Confidence 221 00 11223789999999999999999643211 12467788
Q ss_pred HHHcCCceeEEE
Q 030025 160 ATEAGFSGIRFV 171 (184)
Q Consensus 160 l~~aGf~~i~~~ 171 (184)
+++.||..+++.
T Consensus 184 l~~~GF~~v~~~ 195 (290)
T 2xyq_A 184 MGHFSWWTAFVT 195 (290)
T ss_dssp HTTEEEEEEEEE
T ss_pred HHHcCCcEEEEE
Confidence 888899877765
No 225
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.37 E-value=9.2e-13 Score=96.85 Aligned_cols=108 Identities=9% Similarity=0.170 Sum_probs=79.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~ 78 (184)
+..+.+.+++.+. ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++. ++++++.+|+.+ +++
T Consensus 15 d~~~~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 15 SKHNIDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp CHHHHHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCC
T ss_pred CHHHHHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcc
Confidence 4677888998887 7888999999999999999999985 68999999 8888877653 689999999988 665
Q ss_pred C-CCEEEechhhhcCChHHHHHHH--------------HHHHhhCCCCcEEE
Q 030025 79 N-GDAILIKWILHDWSDEHCLKLL--------------KNCHKSIPEGGKVI 115 (184)
Q Consensus 79 ~-~D~i~~~~~l~~~~~~~~~~~l--------------~~~~~~L~pgG~l~ 115 (184)
. .+..++++.-+++..+-...++ +.+.|+++|+|.+.
T Consensus 92 ~~~~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~ 143 (244)
T 1qam_A 92 KNQSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLA 143 (244)
T ss_dssp SSCCCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHH
T ss_pred cCCCeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchh
Confidence 4 3434443433343333222332 34778888888653
No 226
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.37 E-value=3e-13 Score=101.07 Aligned_cols=109 Identities=10% Similarity=0.037 Sum_probs=80.7
Q ss_pred HHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cC-----
Q 030025 12 ILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SV----- 77 (184)
Q Consensus 12 l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~----- 77 (184)
+...+. ..+..+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++ .++.++.+|+.+ +.
T Consensus 75 ~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 75 PPIVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKN 153 (274)
T ss_dssp HHHHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHT
T ss_pred HHHHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhc
Confidence 344555 677889999999999999999998766 89999999 8888877653 479999999876 32
Q ss_pred CCC-CEEEech------hhhcC---Ch-------HHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 78 PNG-DAILIKW------ILHDW---SD-------EHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 78 ~~~-D~i~~~~------~l~~~---~~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
... |+|++.- ++++- .. .....+++++.+.|||||++++++-..
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 333 9998862 22210 00 112478999999999999999976543
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.37 E-value=2e-13 Score=103.75 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=73.5
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCcc--C-CCC-CEEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQS--V-PNG-DAIL 84 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~~--~-~~~-D~i~ 84 (184)
++..+|||||||+|..+..+++..+..+++++|+ +.+++.|+++ ++++++.+|+.+. . +.. |+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999999877889999999 8888877642 4689999998762 1 233 9999
Q ss_pred echhhhcCChHHH---HHHHHHHHhhCCCCcEEEEEe
Q 030025 85 IKWILHDWSDEHC---LKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 85 ~~~~l~~~~~~~~---~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+... +++.+... ..+++++++.|+|||.+++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8553 33322211 478999999999999999854
No 228
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.36 E-value=3.7e-13 Score=100.64 Aligned_cols=99 Identities=20% Similarity=0.232 Sum_probs=76.6
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCcc---CCCC-CEEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQS---VPNG-DAIL 84 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~~---~~~~-D~i~ 84 (184)
+...+|||||||+|.++..+++..+..+++++|+ +.+++.|+++ ++++++.+|..+. .+.. |+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4578999999999999999998767789999999 8898877642 5799999998762 2233 9999
Q ss_pred echhhhcCChH--HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 85 IKWILHDWSDE--HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 85 ~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+....+..+.. ...++++++++.|+|||.+++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 96544322110 01368999999999999999853
No 229
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.36 E-value=5.1e-13 Score=100.89 Aligned_cols=98 Identities=20% Similarity=0.255 Sum_probs=73.7
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCcc--C-CCC-CEEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQS--V-PNG-DAIL 84 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~~--~-~~~-D~i~ 84 (184)
+...+|||||||+|..+..+++..+..+++++|+ +.+++.++++ ++++++.+|+.+. . +.. |+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999877789999999 8888877652 5799999998762 2 233 9999
Q ss_pred echhhhcCChH---HHHHHHHHHHhhCCCCcEEEEE
Q 030025 85 IKWILHDWSDE---HCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 85 ~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
+...-++.... ...++++++++.|+|||.+++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 85432212111 1147899999999999999995
No 230
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.36 E-value=3.5e-13 Score=102.84 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=76.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccCcc---CCCC-CEEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMFQS---VPNG-DAIL 84 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~~~---~~~~-D~i~ 84 (184)
++..+|||||||+|.++..+++..+..+++++|+ +.+++.|+++ ++++++.+|..+. .+.. |+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4568999999999999999998777889999999 8888877542 5789999998762 2333 9999
Q ss_pred echhhhcCChH-H--HHHHHHHHHhhCCCCcEEEEEe
Q 030025 85 IKWILHDWSDE-H--CLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 85 ~~~~l~~~~~~-~--~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+... .++... . ..++++++++.|+|||.+++..
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8653 222211 1 1478999999999999999853
No 231
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.36 E-value=5e-13 Score=103.65 Aligned_cols=95 Identities=21% Similarity=0.242 Sum_probs=72.1
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC-------CCceEEEcccCc-cCCCC-CEEEechhhhc
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG-DAILIKWILHD 91 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~-D~i~~~~~l~~ 91 (184)
++++|||||||+|-++...++.. ..+++++|.+.|++.|++. ++|+++.+|+.+ .+|.. |+|++...-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 57899999999999987666653 4589999986577777652 569999999988 66665 99998554333
Q ss_pred CChH-HHHHHHHHHHhhCCCCcEEEE
Q 030025 92 WSDE-HCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 92 ~~~~-~~~~~l~~~~~~L~pgG~l~i 116 (184)
+..+ ....++....++|+|||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccchhhhHHHHHHhhCCCCceECC
Confidence 3222 234678888899999999874
No 232
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.36 E-value=4.1e-12 Score=100.15 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=86.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccC-CCC-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSV-PNG- 80 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~-~~~- 80 (184)
...+++.+++.+. ..+..+|||+|||+|.++..++++. +..+++++|+ +.+++.| .++.++++|+.+.. ...
T Consensus 24 P~~l~~~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~f 99 (421)
T 2ih2_A 24 PPEVVDFMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAF 99 (421)
T ss_dssp CHHHHHHHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCE
T ss_pred CHHHHHHHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCC
Confidence 3567788888887 5567799999999999999999886 6789999999 8888877 68999999998733 233
Q ss_pred CEEEechhhhc----------CChHHH-----------------HHHHHHHHhhCCCCcEEEEEeee
Q 030025 81 DAILIKWILHD----------WSDEHC-----------------LKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 81 D~i~~~~~l~~----------~~~~~~-----------------~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
|+|+++-.... +.++.. ..+++.+.++|+|||++++..+.
T Consensus 100 D~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 100 DLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp EEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 99999533221 222221 25799999999999999986653
No 233
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.36 E-value=2e-13 Score=100.37 Aligned_cols=110 Identities=16% Similarity=0.231 Sum_probs=82.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~ 78 (184)
+..+.+.+++.+. ..+..+|||+|||+|.++..+++.. .+++++|+ +.+++.++++ ++++++.+|+.+ +++
T Consensus 14 ~~~~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 14 SEKVLNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp CTTTHHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCC
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcc
Confidence 4567888999988 8888999999999999999999985 79999999 8999988875 478999999988 555
Q ss_pred C-CCEEEechhhhcCChHHHHH----------HH----HHHHhhCCCCcEEEEE
Q 030025 79 N-GDAILIKWILHDWSDEHCLK----------LL----KNCHKSIPEGGKVIVV 117 (184)
Q Consensus 79 ~-~D~i~~~~~l~~~~~~~~~~----------~l----~~~~~~L~pgG~l~i~ 117 (184)
. ....++++.-++...+.... ++ +.+.++|+|||.+.+.
T Consensus 91 ~~~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 91 NKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CSSEEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred cCCCcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 3 22233333323333222222 23 6699999999998764
No 234
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.35 E-value=1.4e-12 Score=96.75 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=79.1
Q ss_pred hHHHHHHHhcC--CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----------CCceEEEcccC
Q 030025 8 VLQKILEAYKG--FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----------PGVKHVGGDMF 74 (184)
Q Consensus 8 ~~~~l~~~~~~--~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~i~~~~~d~~ 74 (184)
...+++.+.+. .+.+.+|||||||+|..+..+++. + .+++++|+ +.+++.|+++ ++++++.+|..
T Consensus 57 ~y~e~l~~~~~~~~~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~ 134 (262)
T 2cmg_A 57 IESELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLD 134 (262)
T ss_dssp HHHHHHHHHHHTTSSCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGG
T ss_pred HHHHHHHHHhhhcCCCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHH
Confidence 34455554431 245689999999999999999988 7 89999999 9999999874 46899999988
Q ss_pred ccCCCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 75 QSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 75 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
+.....|+|++.. .++. .+++++++.|+|||.+++.
T Consensus 135 ~~~~~fD~Ii~d~-----~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 135 LDIKKYDLIFCLQ-----EPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp SCCCCEEEEEESS-----CCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred HHHhhCCEEEECC-----CChH--HHHHHHHHhcCCCcEEEEE
Confidence 7433339999862 3333 4899999999999999985
No 235
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.33 E-value=5e-12 Score=100.69 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=85.2
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c--C
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S--V 77 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~--~ 77 (184)
...+...+. ..+..+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++ .++.++.+|+.+ + +
T Consensus 248 s~l~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 248 SAVASIVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEII 326 (450)
T ss_dssp HHHHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSS
T ss_pred hHHHHHhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhh
Confidence 334455555 778889999999999999999998776 89999999 8888776553 579999999987 3 4
Q ss_pred C-CC-CEEEe------chhhhcCChHH--------------HHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 78 P-NG-DAILI------KWILHDWSDEH--------------CLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 78 ~-~~-D~i~~------~~~l~~~~~~~--------------~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
+ .. |+|++ ..++++.++.. ...+++++.+.|||||++++++...
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 4 33 99986 34555443321 1478999999999999999977543
No 236
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=4e-12 Score=96.10 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=78.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S 76 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~ 76 (184)
+..+++.+++.+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.++++ ++++++.+|+.+ +
T Consensus 27 ~~~i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 27 NPGILDKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 4567888999888 788899999999999999999987 469999999 8888877653 579999999987 5
Q ss_pred CCCCCEEEechhhhcCChHHHHHHH---------------HHHHhhCCCCc
Q 030025 77 VPNGDAILIKWILHDWSDEHCLKLL---------------KNCHKSIPEGG 112 (184)
Q Consensus 77 ~~~~D~i~~~~~l~~~~~~~~~~~l---------------~~~~~~L~pgG 112 (184)
.+..|+|+++... ++..+....++ +.+.|+++|+|
T Consensus 104 ~~~~D~Vv~n~py-~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 104 FPKFDVCTANIPY-KISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCCCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cccCCEEEEcCCc-ccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 5545999986554 44555444555 44678898887
No 237
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.29 E-value=3.7e-12 Score=98.12 Aligned_cols=108 Identities=11% Similarity=0.162 Sum_probs=83.6
Q ss_pred HHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC-----CeEEEeec-hhHhhhCCCC-----CCceEEEcccCccCC-C
Q 030025 12 ILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-----IKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQSVP-N 79 (184)
Q Consensus 12 l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-----~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~~~~-~ 79 (184)
++..+....+..+|||+|||+|.++..+++..+. .+++|+|+ +.+++.|+.. .++.+..+|...+.+ .
T Consensus 121 ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~ 200 (344)
T 2f8l_A 121 LLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVD 200 (344)
T ss_dssp HHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCC
T ss_pred HHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccC
Confidence 4444421345689999999999999999988653 78999999 8888887653 368999999887433 3
Q ss_pred C-CEEEechhhhcCChHHH----------------HHHHHHHHhhCCCCcEEEEEee
Q 030025 80 G-DAILIKWILHDWSDEHC----------------LKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. |+|+++-.+++++.++. ..++.++.+.|+|||++++..+
T Consensus 201 ~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 201 PVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 3 99999988877654432 2589999999999999998764
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.29 E-value=1.1e-11 Score=98.14 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=85.5
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-c--C
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-S--V 77 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~--~ 77 (184)
.....+...+. ..+..+|||+|||+|..+..+++..++.+++++|+ +.+++.++++ .++.++.+|+.+ + +
T Consensus 233 ~~s~~~~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~ 311 (429)
T 1sqg_A 233 ASAQGCMTWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWC 311 (429)
T ss_dssp HHHHTHHHHHC-CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHH
T ss_pred HHHHHHHHHcC-CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhc
Confidence 34445555666 67888999999999999999999988789999999 8888777653 357899999987 2 3
Q ss_pred CC-C-CEEEe------chhhhcCChHH--------------HHHHHHHHHhhCCCCcEEEEEeee
Q 030025 78 PN-G-DAILI------KWILHDWSDEH--------------CLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 78 ~~-~-D~i~~------~~~l~~~~~~~--------------~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+. . |+|++ ..++++.++.. ...+++++.+.|||||++++++-.
T Consensus 312 ~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 32 3 99986 23444433311 137899999999999999997743
No 239
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.25 E-value=2.7e-11 Score=90.36 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=89.7
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCC-C-CCEEEechh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVP-N-GDAILIKWI 88 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~-~-~D~i~~~~~ 88 (184)
.+++.+|||+|||+|.++..++++. ..+++++|+ +.+++.++++ ++++++.+|..+-.+ . .|.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 4578999999999999999999874 468999999 8888888764 568999999987322 2 399988643
Q ss_pred hhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCcee
Q 030025 89 LHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGI 168 (184)
Q Consensus 89 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i 168 (184)
.. ...++..+.++|||||++.+.+....... .....+.+.+..++.|++..
T Consensus 202 ~~------~~~~l~~a~~~lk~gG~ih~~~~~~e~~~-----------------------~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 VR------THEFIPKALSIAKDGAIIHYHNTVPEKLM-----------------------PREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp SS------GGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------TTTTHHHHHHHHHHTTCEEE
T ss_pred Cc------HHHHHHHHHHHcCCCCEEEEEeeeccccc-----------------------chhHHHHHHHHHHHcCCcEE
Confidence 22 12578899999999999988765432210 01135677888899998754
No 240
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.23 E-value=1e-11 Score=98.74 Aligned_cols=108 Identities=9% Similarity=0.081 Sum_probs=80.7
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c--CC
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S--VP 78 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~--~~ 78 (184)
..+...+. ..+..+|||+|||+|..+..+++..++ .+++++|+ +.+++.++++ . +.++.+|+.+ + .+
T Consensus 91 ~l~a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~ 168 (464)
T 3m6w_A 91 QAVGVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFG 168 (464)
T ss_dssp HHHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHC
T ss_pred HHHHHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhcc
Confidence 34445555 778899999999999999999998754 79999999 8888888764 4 8899999876 2 33
Q ss_pred CC-CEEEec------hhhhcCCh-------H-------HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 79 NG-DAILIK------WILHDWSD-------E-------HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 79 ~~-D~i~~~------~~l~~~~~-------~-------~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.. |+|++. .++..-++ + ....+++++.+.|||||+|+.++-
T Consensus 169 ~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 169 TYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp SCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 44 999852 22322221 1 115789999999999999998653
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.23 E-value=3.7e-11 Score=96.14 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=80.1
Q ss_pred HHHhcCCC--CCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c--CCC
Q 030025 13 LEAYKGFE--HIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S--VPN 79 (184)
Q Consensus 13 ~~~~~~~~--~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~--~~~ 79 (184)
...+. .. +..+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++ .++.++.+|+.+ + .+.
T Consensus 108 ~~~L~-~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 108 VAALF-ADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp HHHHT-TTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTT
T ss_pred HHHhC-cccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccc
Confidence 34455 55 788999999999999999999864 579999999 8888877654 578999999987 3 344
Q ss_pred C-CEEEec------hhhhcCC-------hH-------HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 80 G-DAILIK------WILHDWS-------DE-------HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 80 ~-D~i~~~------~~l~~~~-------~~-------~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. |.|++. .++.+.+ .. ....+|+++.++|||||+|++++-
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 4 999872 2333222 11 123789999999999999998764
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.22 E-value=1.8e-11 Score=97.12 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=80.6
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC-CCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-c--CC
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP-HIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-S--VP 78 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~--~~ 78 (184)
..+...+. ..+..+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++ .++.++.+|..+ . .+
T Consensus 95 ~l~~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~ 173 (456)
T 3m4x_A 95 MIVGTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFS 173 (456)
T ss_dssp HHHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHT
T ss_pred HHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcc
Confidence 34455566 77889999999999999999998854 479999999 8888877664 578899999876 2 33
Q ss_pred CC-CEEEech------hhhcCChH--------------HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 79 NG-DAILIKW------ILHDWSDE--------------HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 79 ~~-D~i~~~~------~l~~~~~~--------------~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.. |+|++.- ++..-++. ....+|+++.+.|||||+|+.++-
T Consensus 174 ~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 174 GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 44 9998732 22211110 112789999999999999998664
No 243
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.21 E-value=5.2e-10 Score=86.62 Aligned_cols=164 Identities=17% Similarity=0.229 Sum_probs=98.7
Q ss_pred hHHHHHHHhcCCC-----CCCeEEEecCCcChHHHHHH--------hhC-------CCCeEEEeec-hhH-------hhh
Q 030025 8 VLQKILEAYKGFE-----HIKQLVDVGGSLGNTLKAIT--------SKY-------PHIKGINFDL-PHV-------IQH 59 (184)
Q Consensus 8 ~~~~l~~~~~~~~-----~~~~ilDiG~G~G~~~~~l~--------~~~-------~~~~~~~~D~-~~~-------~~~ 59 (184)
++.+.++.+. .. +..+|+|+|||+|.++..+. +++ |+.++...|+ ... +..
T Consensus 35 ~~~~ai~~l~-~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~ 113 (374)
T 3b5i_A 35 LLEETLENVH-LNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPP 113 (374)
T ss_dssp HHHHHHHTSC-CCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCC
T ss_pred HHHHHHHHhh-ccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhh
Confidence 3444455554 33 25789999999999998872 222 7788999997 333 222
Q ss_pred CCC------C------CC--ceEEEcccCc-cCCCC--CEEEechhhhcCChH---------------------------
Q 030025 60 SPE------Y------PG--VKHVGGDMFQ-SVPNG--DAILIKWILHDWSDE--------------------------- 95 (184)
Q Consensus 60 a~~------~------~~--i~~~~~d~~~-~~~~~--D~i~~~~~l~~~~~~--------------------------- 95 (184)
.++ + +. +.-+.+.+.. .+|.. |+|+++.++|++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~ 193 (374)
T 3b5i_A 114 LVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTT 193 (374)
T ss_dssp BCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHH
T ss_pred hhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHH
Confidence 211 0 11 2224455554 56655 999999999998621
Q ss_pred ---------HHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccc--cc--hhhhhhH-hh----------hh--CCCcc
Q 030025 96 ---------HCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHS--KI--NSLADVL-VM----------TQ--YPGGK 149 (184)
Q Consensus 96 ---------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~--~~--~~~~~~~-~~----------~~--~~~~~ 149 (184)
+...+|+..++.|+|||++++.-....+........ .. ..+.... .+ .. .....
T Consensus 194 ~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y 273 (374)
T 3b5i_A 194 TAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVY 273 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCcccc
Confidence 334578899999999999999887665431111000 00 0010000 00 00 11223
Q ss_pred ccCHHHHHHHHH-HcCCceeEEEe
Q 030025 150 ERTKHEFTTLAT-EAGFSGIRFVC 172 (184)
Q Consensus 150 ~~~~~~~~~~l~-~aGf~~i~~~~ 172 (184)
.++.+++.+.++ +.||++.++..
T Consensus 274 ~ps~~E~~~~l~~~~~F~I~~le~ 297 (374)
T 3b5i_A 274 APSLQDFKEVVDANGSFAIDKLVV 297 (374)
T ss_dssp CCCHHHHHHHHHHHCSEEEEEEEE
T ss_pred CCCHHHHHHHHHhcCCcEEEEEEE
Confidence 469999999998 58999877654
No 244
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.19 E-value=1.7e-10 Score=90.22 Aligned_cols=107 Identities=13% Similarity=0.121 Sum_probs=77.0
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---C--CceEEEcccCcc---CCC
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---P--GVKHVGGDMFQS---VPN 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~--~i~~~~~d~~~~---~~~ 79 (184)
...++..+. ++..+|||+|||+|.++..+++. +..++++|+ +.+++.++++ + ...+..+|+.+. .+.
T Consensus 204 ~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~ 279 (393)
T 4dmg_A 204 NRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEG 279 (393)
T ss_dssp HHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCC
T ss_pred HHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcC
Confidence 344454432 45789999999999999999987 345999999 8999988764 2 235778998762 223
Q ss_pred -CCEEEechhhhcCC-------hHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 80 -GDAILIKWILHDWS-------DEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 80 -~D~i~~~~~l~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.|+|++.-....-. ......+++.+.++|+|||.|++.+.
T Consensus 280 ~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 280 PFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 39999854321111 12334789999999999999997664
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.17 E-value=7.9e-11 Score=88.62 Aligned_cols=83 Identities=8% Similarity=0.146 Sum_probs=70.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~ 78 (184)
+..+++.+++.+. ..+..+|||||||+|.++..++++ ..+++++|+ +.+++.+++. ++++++.+|+.+ +++
T Consensus 35 d~~i~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 35 DKNFVNKAVESAN-LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLN 111 (295)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGG
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcc
Confidence 4567889999988 888899999999999999999998 468999999 8898888764 789999999998 666
Q ss_pred C--CCEEEechhhh
Q 030025 79 N--GDAILIKWILH 90 (184)
Q Consensus 79 ~--~D~i~~~~~l~ 90 (184)
. .|+|+++...+
T Consensus 112 ~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 112 KLDFNKVVANLPYQ 125 (295)
T ss_dssp GSCCSEEEEECCGG
T ss_pred cCCccEEEEeCccc
Confidence 5 39999775543
No 246
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.16 E-value=1.3e-10 Score=85.50 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=71.7
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--CCceEEEcccCc-cCCCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQ-SVPNG 80 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~-~~~~~ 80 (184)
+..+++.+++.+. ..+..+|||||||+|.++..++++ +..+++++|+ +.+++.+++. .+++++.+|+.+ +++..
T Consensus 16 d~~i~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 16 SEGVLKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSL 93 (249)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGS
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHc
Confidence 4678899999998 888899999999999999999987 3579999999 8999888765 578999999988 55542
Q ss_pred --CEEEechhhhcCChH
Q 030025 81 --DAILIKWILHDWSDE 95 (184)
Q Consensus 81 --D~i~~~~~l~~~~~~ 95 (184)
+.+++.+.-+++..+
T Consensus 94 ~~~~~vv~NlPy~i~~~ 110 (249)
T 3ftd_A 94 GKELKVVGNLPYNVASL 110 (249)
T ss_dssp CSSEEEEEECCTTTHHH
T ss_pred cCCcEEEEECchhccHH
Confidence 455666666665544
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.15 E-value=3e-10 Score=89.98 Aligned_cols=103 Identities=14% Similarity=0.188 Sum_probs=77.0
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccC-
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSV- 77 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~- 77 (184)
..++..+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+++ .+++|+.+|+.+.+
T Consensus 272 e~l~~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 272 QKMVARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCS
T ss_pred HHHHHHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhh
Confidence 446677777777 777889999999999999999987 579999999 8899888763 47999999998732
Q ss_pred ----CC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 78 ----PN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 78 ----~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
+. . |+|++.-...-. ..+++.+.+ ++|++.++++
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~-----~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA-----AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC-----HHHHHHHHH-HCCSEEEEEE
T ss_pred hhhhhcCCCCEEEECCCCccH-----HHHHHHHHh-cCCCeEEEEE
Confidence 22 3 999985433221 135555554 6888887773
No 248
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.14 E-value=4.8e-11 Score=93.19 Aligned_cols=99 Identities=16% Similarity=0.072 Sum_probs=74.5
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------C--CceEEEcccCccC------CCC-CEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------P--GVKHVGGDMFQSV------PNG-DAI 83 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~--~i~~~~~d~~~~~------~~~-D~i 83 (184)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|+++ . +++++.+|+.+.. +.. |+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 457899999999999999999863 348999999 8999888764 2 7899999997621 223 999
Q ss_pred Eechhh-----hcCC--hHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 84 LIKWIL-----HDWS--DEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 84 ~~~~~l-----~~~~--~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++.-.. .+.. .....++++.+.++|+|||.+++...
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 984333 2222 12334678889999999999998653
No 249
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.12 E-value=2.2e-10 Score=85.21 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=72.5
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---CCceEEEcccCc-cCCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---PGVKHVGGDMFQ-SVPN 79 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~~i~~~~~d~~~-~~~~ 79 (184)
+..+++.+++.+. ..+. +|||||||+|.++..++++. .+++++|+ +.|++.++++ .+++++.+|+.+ +++.
T Consensus 32 d~~i~~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 32 SEAHLRRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEE 107 (271)
T ss_dssp CHHHHHHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGG
T ss_pred CHHHHHHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhh
Confidence 4568899999998 7888 99999999999999999985 68999999 8898887653 579999999988 5553
Q ss_pred --C-CEEEechhhhcCChHHHHHHHHH
Q 030025 80 --G-DAILIKWILHDWSDEHCLKLLKN 103 (184)
Q Consensus 80 --~-D~i~~~~~l~~~~~~~~~~~l~~ 103 (184)
. |.|+++ .-+++..+-..+++..
T Consensus 108 ~~~~~~iv~N-lPy~iss~il~~ll~~ 133 (271)
T 3fut_A 108 VPQGSLLVAN-LPYHIATPLVTRLLKT 133 (271)
T ss_dssp SCTTEEEEEE-ECSSCCHHHHHHHHHH
T ss_pred ccCccEEEec-CcccccHHHHHHHhcC
Confidence 2 666654 4456666544444443
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=2.7e-10 Score=89.10 Aligned_cols=115 Identities=9% Similarity=0.009 Sum_probs=85.5
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC--------------------------------------
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-------------------------------------- 45 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-------------------------------------- 45 (184)
....++..++.... +.+..+|||.+||+|.++..++....+
T Consensus 185 l~e~lAa~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 185 IKETMAAALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp CCHHHHHHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CcHHHHHHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 35567788888877 888999999999999999888866432
Q ss_pred CeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCC-CEEEechhhhcC-C-hHHHHHHHHHHHhhCCC--C
Q 030025 46 IKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG-DAILIKWILHDW-S-DEHCLKLLKNCHKSIPE--G 111 (184)
Q Consensus 46 ~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~-D~i~~~~~l~~~-~-~~~~~~~l~~~~~~L~p--g 111 (184)
.+++++|+ +.|++.|+++ .+++++++|+.+ +.+.. |+|+++-.+..- . .++...+++.+.+.||+ |
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 57999999 9999988764 359999999988 44444 999998555432 2 13344566666666655 8
Q ss_pred cEEEEEee
Q 030025 112 GKVIVVES 119 (184)
Q Consensus 112 G~l~i~~~ 119 (184)
|.+++...
T Consensus 344 ~~~~iit~ 351 (393)
T 3k0b_A 344 WSVYVLTS 351 (393)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 88888654
No 251
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.12 E-value=5.2e-11 Score=92.93 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=75.4
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCccC------CCC-CEEEec
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQSV------PNG-DAILIK 86 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~~------~~~-D~i~~~ 86 (184)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|+++ .+++++.+|+.+.. +.. |+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999998 568999999 8899888764 45899999998621 233 999984
Q ss_pred hhhhcCC-------hHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 87 WILHDWS-------DEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 87 ~~l~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
-...... ......++.++.++|+|||.+++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 3321111 13345789999999999999999764
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.12 E-value=4.5e-10 Score=87.52 Aligned_cols=115 Identities=10% Similarity=-0.006 Sum_probs=88.4
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC--------------------------------------
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH-------------------------------------- 45 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~-------------------------------------- 45 (184)
....++..|+.... +.+...++|.+||+|.++...+....+
T Consensus 178 l~e~LAaall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 178 IKENMAAAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCHHHHHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CcHHHHHHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 34567788888877 888999999999999999888865433
Q ss_pred CeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCC-CEEEechhhhc-CC-hHHHHHHHHHHHhhCCC--C
Q 030025 46 IKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG-DAILIKWILHD-WS-DEHCLKLLKNCHKSIPE--G 111 (184)
Q Consensus 46 ~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~-D~i~~~~~l~~-~~-~~~~~~~l~~~~~~L~p--g 111 (184)
.+++++|+ +.|++.|+++ ..++++++|+.+ +.+.. |+|+++-.++. +. .++...+++.+.+.||+ |
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 57999999 9999988764 358999999998 44444 99999766544 33 34555777777777766 8
Q ss_pred cEEEEEee
Q 030025 112 GKVIVVES 119 (184)
Q Consensus 112 G~l~i~~~ 119 (184)
|.+.+...
T Consensus 337 ~~~~iit~ 344 (384)
T 3ldg_A 337 WSQFILTN 344 (384)
T ss_dssp SEEEEEES
T ss_pred cEEEEEEC
Confidence 98888654
No 253
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.11 E-value=4.8e-11 Score=93.55 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=75.9
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------C-CceEEEcccCccC------CCC-CEEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------P-GVKHVGGDMFQSV------PNG-DAIL 84 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~-~i~~~~~d~~~~~------~~~-D~i~ 84 (184)
++..+|||+|||+|.++..+++. ...+++++|+ +.+++.++++ . +++++.+|+.+.. +.. |+|+
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 36789999999999999999986 3458999999 8898888764 2 7899999987621 223 9999
Q ss_pred echhhhcCCh-------HHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSD-------EHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~-------~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+.-....... .....++.++.++|+|||.+++.+.
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 8543221111 3345789999999999999998764
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.11 E-value=2e-10 Score=89.63 Aligned_cols=114 Identities=14% Similarity=0.084 Sum_probs=86.6
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC--------------------------------------C
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH--------------------------------------I 46 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~--------------------------------------~ 46 (184)
...++..|+.... +.+..+|||++||+|.++..++....+ .
T Consensus 180 ~e~lAa~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 180 RETLAAGLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CHHHHHHHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred cHHHHHHHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 4557777888777 888999999999999999988876322 5
Q ss_pred eEEEeec-hhHhhhCCCC-------CCceEEEcccCc-cCCCC-CEEEechhhhcC-C-hHHHHHHHHHHHhhCCC--Cc
Q 030025 47 KGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-SVPNG-DAILIKWILHDW-S-DEHCLKLLKNCHKSIPE--GG 112 (184)
Q Consensus 47 ~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~~~~~-D~i~~~~~l~~~-~-~~~~~~~l~~~~~~L~p--gG 112 (184)
+++|+|+ +.+++.|+++ .++++.++|+.+ +.+.. |+|+++-.+..- . .++...+++++.+.|++ ||
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~ 338 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNW 338 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCC
Confidence 7999999 9999998874 368999999988 44444 999997765432 2 23445677777777766 88
Q ss_pred EEEEEee
Q 030025 113 KVIVVES 119 (184)
Q Consensus 113 ~l~i~~~ 119 (184)
.+.+...
T Consensus 339 ~~~iit~ 345 (385)
T 3ldu_A 339 SYYLITS 345 (385)
T ss_dssp EEEEEES
T ss_pred EEEEEEC
Confidence 8887553
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.10 E-value=5.2e-11 Score=94.69 Aligned_cols=114 Identities=16% Similarity=0.117 Sum_probs=87.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-------------CCCeEEEeec-hhHhhhCCCC------C
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-------------PHIKGINFDL-PHVIQHSPEY------P 64 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-------------~~~~~~~~D~-~~~~~~a~~~------~ 64 (184)
...+++.|++.+. ..+..+|||.|||+|.++..+++.. +..+++|+|+ +.+++.|+.+ .
T Consensus 156 P~~v~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 156 PRPLIQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CHHHHHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 4567778888776 5667899999999999999888763 3468999999 8888877642 2
Q ss_pred --CceEEEcccCc-cCCCC-CEEEechhhhcCChH---------------HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 65 --GVKHVGGDMFQ-SVPNG-DAILIKWILHDWSDE---------------HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 65 --~i~~~~~d~~~-~~~~~-D~i~~~~~l~~~~~~---------------~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++.+.++|... +.... |+|+++-.++..... ....++..+.+.|+|||++.+..+
T Consensus 235 ~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 67899999987 43334 999998776653211 113789999999999999988765
No 256
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.10 E-value=3.1e-10 Score=88.90 Aligned_cols=99 Identities=11% Similarity=0.058 Sum_probs=75.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------C-CceEEEcccCccC------CCC-CEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------P-GVKHVGGDMFQSV------PNG-DAI 83 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~-~i~~~~~d~~~~~------~~~-D~i 83 (184)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|+++ . +++++.+|+.+.. +.. |+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 357899999999999999999874 458999999 8898888653 2 6889999997621 223 999
Q ss_pred EechhhhcCC-------hHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 84 LIKWILHDWS-------DEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 84 ~~~~~l~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++.-...... ......++.++.+.|+|||.+++...
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9864321110 12345789999999999999998663
No 257
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.10 E-value=8.8e-11 Score=90.14 Aligned_cols=93 Identities=16% Similarity=0.167 Sum_probs=74.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCccCCCCCEEEechhhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQSVPNGDAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~~~~~~D~i~~~~~l~ 90 (184)
+.+..+|||+|||+|.++.. ++ ...+++++|+ +.+++.++++ +++.++.+|+.+.....|+|++.....
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPKF 269 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTTT
T ss_pred cCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcHh
Confidence 35678999999999999998 76 4679999999 8898888764 479999999988443339999853322
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
. ..+++.+.++|+|||.+++.+..
T Consensus 270 ~------~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 270 A------HKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp G------GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred H------HHHHHHHHHHcCCCCEEEEEEee
Confidence 1 26899999999999999997754
No 258
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.10 E-value=1.3e-10 Score=85.62 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=65.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~ 78 (184)
+..+++.+++.+. ..+..+|||||||+|.++. +. +.+..+++++|+ +.|++.++++ ++++++.+|+.+ +++
T Consensus 6 d~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 6 DQFVIDSIVSAIN-PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFG 82 (252)
T ss_dssp CHHHHHHHHHHHC-CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHH
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHH
Confidence 4678889999998 8888999999999999999 54 444334999999 9999988765 479999999987 443
Q ss_pred C------CCEEEechhhhcCChH
Q 030025 79 N------GDAILIKWILHDWSDE 95 (184)
Q Consensus 79 ~------~D~i~~~~~l~~~~~~ 95 (184)
. .+.+++.+.-++++.+
T Consensus 83 ~~~~~~~~~~~vvsNlPY~i~~~ 105 (252)
T 1qyr_A 83 ELAEKMGQPLRVFGNLPYNISTP 105 (252)
T ss_dssp HHHHHHTSCEEEEEECCTTTHHH
T ss_pred HhhcccCCceEEEECCCCCccHH
Confidence 2 2334444444455444
No 259
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.08 E-value=7.6e-11 Score=88.12 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=62.2
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCC--CeEEEeec-hhHhhhCCCC--CCceEEEcccCc-cCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPH--IKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~--~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~-~~~ 78 (184)
+..+.+.+++.+. ..+..+|||||||+|.++..++++.+. .+++++|+ +.|++.++++ ++++++.+|+.+ +++
T Consensus 27 d~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 27 DHGVIDAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG 105 (279)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh
Confidence 4567889999998 888999999999999999999998543 45999999 8999888765 689999999987 554
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=2.8e-10 Score=83.97 Aligned_cols=71 Identities=17% Similarity=0.235 Sum_probs=61.5
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVP 78 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~ 78 (184)
+..+++.+++.+. ..+..+|||||||+|.++..++++. .+++++|+ +.|++.++++ ++++++.+|+.+ +++
T Consensus 14 d~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 14 DSFVLQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFS 90 (255)
T ss_dssp CHHHHHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGG
T ss_pred CHHHHHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHH
Confidence 4568889999998 8889999999999999999999985 68999999 8898887653 689999999988 553
No 261
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.06 E-value=1.1e-09 Score=80.64 Aligned_cols=108 Identities=13% Similarity=0.032 Sum_probs=71.5
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc-cCCC-C-
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ-SVPN-G- 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~-~~~~-~- 80 (184)
..++.+... +.+..+|||+|||+|.++..++++.+...+.++|+ -++....... .++.....++.. .++. .
T Consensus 63 L~ei~ek~~-l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~ 141 (277)
T 3evf_A 63 LRWFHERGY-VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKC 141 (277)
T ss_dssp HHHHHHTTS-SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCC
T ss_pred HHHHHHhCC-CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCc
Confidence 344555544 77888999999999999998888765557778887 4432112211 145555565432 4433 2
Q ss_pred CEEEechhhh----cCChHHHHHHHHHHHhhCCCC-cEEEEE
Q 030025 81 DAILIKWILH----DWSDEHCLKLLKNCHKSIPEG-GKVIVV 117 (184)
Q Consensus 81 D~i~~~~~l~----~~~~~~~~~~l~~~~~~L~pg-G~l~i~ 117 (184)
|+|++..+.+ ..+......+|+.+.++|+|| |.+++-
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 9999977655 222222235678899999999 999983
No 262
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.04 E-value=9.3e-10 Score=86.90 Aligned_cols=91 Identities=12% Similarity=0.063 Sum_probs=69.2
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---C--CceEEEcccCccCC-CCCEEEechhhhcC
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---P--GVKHVGGDMFQSVP-NGDAILIKWILHDW 92 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~--~i~~~~~d~~~~~~-~~D~i~~~~~l~~~ 92 (184)
.+..+|||+|||+|.++..+++. ..+++++|. +.+++.|+++ + .++++.+|+.+..+ ..|+|++.-.-...
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAGL 366 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECCCTTCS
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcCCccch
Confidence 56789999999999999999986 458999999 8999988764 1 28999999988433 34999985543222
Q ss_pred ChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 93 SDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 93 ~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
. + .+++.+. .|+|||.++++
T Consensus 367 ~-~---~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 367 H-P---RLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp C-H---HHHHHHH-HHCCSEEEEEE
T ss_pred H-H---HHHHHHH-hcCCCcEEEEE
Confidence 2 1 3566554 48999999885
No 263
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.02 E-value=8.3e-09 Score=79.39 Aligned_cols=151 Identities=17% Similarity=0.097 Sum_probs=92.9
Q ss_pred CCCCeEEEecCCcChHHHHHHhh----------------CCCCeEEEeec-hhHhh-hCCCCC------CceE---EEcc
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSK----------------YPHIKGINFDL-PHVIQ-HSPEYP------GVKH---VGGD 72 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~----------------~~~~~~~~~D~-~~~~~-~a~~~~------~i~~---~~~d 72 (184)
+...+|+|+||++|.++..+.+. .|+..+...|+ .+... ..+..+ +--| +.+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999888766554 46788899997 43332 222222 2233 3455
Q ss_pred cCc-cCCCC--CEEEechhhhcCChH-------------------------------HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 73 MFQ-SVPNG--DAILIKWILHDWSDE-------------------------------HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 73 ~~~-~~~~~--D~i~~~~~l~~~~~~-------------------------------~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+.. .+|.. |+++++.++||+++. +-..+|+.-++.|+|||++++.-
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 554 56665 999999999997531 22345888899999999999987
Q ss_pred eecCCCCCCC-cccc-chhhhhhH-hh------------hhCCCccccCHHHHHHHHHHcCC-ceeEE
Q 030025 119 SVLPELPENG-THSK-INSLADVL-VM------------TQYPGGKERTKHEFTTLATEAGF-SGIRF 170 (184)
Q Consensus 119 ~~~~~~~~~~-~~~~-~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~l~~aGf-~~i~~ 170 (184)
....+..... .... ...+.... -+ ........++.+++++.+++.|. ++.++
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 7665431100 0000 00011110 00 00112345689999999999964 65554
No 264
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.00 E-value=6.5e-09 Score=80.63 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=90.5
Q ss_pred CCeEEEecCCcChHHHHHHhh-----------------CCCCeEEEeech------------hHhhhCCC----CCCceE
Q 030025 22 IKQLVDVGGSLGNTLKAITSK-----------------YPHIKGINFDLP------------HVIQHSPE----YPGVKH 68 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~-----------------~~~~~~~~~D~~------------~~~~~a~~----~~~i~~ 68 (184)
..+|+|+||++|.++..+... .|+.++...|+| .+.+..++ ..+--|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 678999999999999988766 366788888864 12221111 112344
Q ss_pred EE---cccCc-cCCCC--CEEEechhhhcCChHH-------------------------H------------HHHHHHHH
Q 030025 69 VG---GDMFQ-SVPNG--DAILIKWILHDWSDEH-------------------------C------------LKLLKNCH 105 (184)
Q Consensus 69 ~~---~d~~~-~~~~~--D~i~~~~~l~~~~~~~-------------------------~------------~~~l~~~~ 105 (184)
+. +.+.. .+|.. |+|+++.++||+++.. . ..+|+.-+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 44444 56665 9999999999975321 1 12366668
Q ss_pred hhCCCCcEEEEEeeecCCCC-CCCcc-ccchhhhhhH--------hhh-hCCCccccCHHHHHHHHHHcC-CceeEEE
Q 030025 106 KSIPEGGKVIVVESVLPELP-ENGTH-SKINSLADVL--------VMT-QYPGGKERTKHEFTTLATEAG-FSGIRFV 171 (184)
Q Consensus 106 ~~L~pgG~l~i~~~~~~~~~-~~~~~-~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~l~~aG-f~~i~~~ 171 (184)
+.|+|||++++.-....+.. ..... .....+.++. ... .......++.+++++.++++| |++.++.
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 99999999999877654431 10100 0000111110 000 011234569999999999995 7776654
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.96 E-value=9.7e-10 Score=91.81 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=74.6
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--------CCceEEEcccCcc---CCCC-CEEEech
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--------PGVKHVGGDMFQS---VPNG-DAILIKW 87 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------~~i~~~~~d~~~~---~~~~-D~i~~~~ 87 (184)
+..+|||+|||+|.++..++... ..+++++|+ +.+++.++++ .+++++++|+.+. .... |+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 57899999999999999988853 347999999 8899888764 2689999999872 2233 9999854
Q ss_pred hhh--------cCC-hHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILH--------DWS-DEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~--------~~~-~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
... .+. ......+++.+.++|+|||.|++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 321 111 23455789999999999999997553
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.96 E-value=3.5e-10 Score=86.82 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=72.4
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--------------CCceEEEcccCccC------C
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--------------PGVKHVGGDMFQSV------P 78 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------------~~i~~~~~d~~~~~------~ 78 (184)
+.+++||+||||+|..++.+++..+ .+++.+|+ +.+++.|+++ ++++++.+|..+.+ .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 3578999999999999999998765 79999999 8899888653 16899999998722 2
Q ss_pred C-CCEEEechhhhcCC-hH---HHHHHHHHH----HhhCCCCcEEEEEe
Q 030025 79 N-GDAILIKWILHDWS-DE---HCLKLLKNC----HKSIPEGGKVIVVE 118 (184)
Q Consensus 79 ~-~D~i~~~~~l~~~~-~~---~~~~~l~~~----~~~L~pgG~l~i~~ 118 (184)
. .|+|++...-..+. .+ -..++++.+ ++.|+|||.+++..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 2 39999865320100 01 123566666 89999999998854
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.90 E-value=4e-09 Score=78.88 Aligned_cols=110 Identities=17% Similarity=0.280 Sum_probs=82.9
Q ss_pred HHhHHHHHHHhcC--CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----------CCceEEEc
Q 030025 6 TLVLQKILEAYKG--FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----------PGVKHVGG 71 (184)
Q Consensus 6 ~~~~~~l~~~~~~--~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----------~~i~~~~~ 71 (184)
.....+++.+.+- -+.+++||-||.|.|..++.+++..+..+++.+|+ +.+++.++++ ++++++.+
T Consensus 66 e~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~ 145 (294)
T 3o4f_A 66 EFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID 145 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred HHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEec
Confidence 3455666655441 35678999999999999999999877789999999 8888887653 78999999
Q ss_pred ccCccCC---CC-CEEEechhh-----hcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 72 DMFQSVP---NG-DAILIKWIL-----HDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 72 d~~~~~~---~~-D~i~~~~~l-----~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|..+.+. .. |+|++-..= ..+-. .++++.+++.|+|||.++...
T Consensus 146 Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t---~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 146 DGVNFVNQTSQTFDVIISDCTDPIGPGESLFT---SAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CTTTTTSCSSCCEEEEEESCCCCCCTTCCSSC---CHHHHHHHHTEEEEEEEEEEE
T ss_pred hHHHHHhhccccCCEEEEeCCCcCCCchhhcC---HHHHHHHHHHhCCCCEEEEec
Confidence 9987322 22 999874321 11111 268999999999999999854
No 268
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.88 E-value=1.9e-09 Score=79.54 Aligned_cols=118 Identities=15% Similarity=0.145 Sum_probs=77.2
Q ss_pred CCCeEEEecCCcChHHHHHHhh-------CCC-----CeEEEeec-h---hHhhhC-----------C------------
Q 030025 21 HIKQLVDVGGSLGNTLKAITSK-------YPH-----IKGINFDL-P---HVIQHS-----------P------------ 61 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~-------~~~-----~~~~~~D~-~---~~~~~a-----------~------------ 61 (184)
+..+|||||+|+|..+..+++. .|. .++++++. + +++..+ +
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999999887765 563 58999996 5 222211 1
Q ss_pred --------CCCCceEEEcccCc---cCCC----C-CEEEech-hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCC
Q 030025 62 --------EYPGVKHVGGDMFQ---SVPN----G-DAILIKW-ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPEL 124 (184)
Q Consensus 62 --------~~~~i~~~~~d~~~---~~~~----~-D~i~~~~-~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 124 (184)
...++++..+|+.+ ..+. . |+|+.-. +-..-++-....+|+.+++.|+|||+|+...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys------ 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC------
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe------
Confidence 11346788999876 2222 3 9998842 2211111012368999999999999988511
Q ss_pred CCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEE
Q 030025 125 PENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFV 171 (184)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~ 171 (184)
....+++.|+++||++.+..
T Consensus 214 ---------------------------aa~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 214 ---------------------------SAGFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp ---------------------------CBHHHHHHHHHHTEEEEEEC
T ss_pred ---------------------------CCHHHHHHHHHCCCEEEeCC
Confidence 01346778899999966543
No 269
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.85 E-value=1.3e-08 Score=77.87 Aligned_cols=144 Identities=11% Similarity=0.134 Sum_probs=101.9
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCC---------------------------CCCceEEEcc
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPE---------------------------YPGVKHVGGD 72 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~---------------------------~~~i~~~~~d 72 (184)
.+...|+.+|||.......+...+++++++.+|.|++++.-++ .++..++..|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3578999999999999999998878899999998666544322 1468899999
Q ss_pred cCc-cC--------C--CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhH
Q 030025 73 MFQ-SV--------P--NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVL 140 (184)
Q Consensus 73 ~~~-~~--------~--~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 140 (184)
+.+ .+ + +. .++++.+++.+++.++...+++.+.+.+ |+|.+++.|...+...... ... .....+.
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~-fg~-~m~~~l~ 252 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDR-FGA-IMQSNLK 252 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCC-HHH-HHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcch-HHH-HHHHHhh
Confidence 987 32 1 22 7889999999999999999999999988 7888888887766221111 100 0011111
Q ss_pred h-hhh-CCC-ccccCHHHHHHHHHHcCCc
Q 030025 141 V-MTQ-YPG-GKERTKHEFTTLATEAGFS 166 (184)
Q Consensus 141 ~-~~~-~~~-~~~~~~~~~~~~l~~aGf~ 166 (184)
. ... ..+ ..+.+.++..++|+++||+
T Consensus 253 ~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 253 ESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred cccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1 100 111 2346899999999999997
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.85 E-value=3.5e-09 Score=79.92 Aligned_cols=81 Identities=21% Similarity=0.279 Sum_probs=67.2
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-----CCceEEEcccCc-c--
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-----PGVKHVGGDMFQ-S-- 76 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~i~~~~~d~~~-~-- 76 (184)
..+.+.+++.+. ..+..+|||+|||+|..+..++++++..+++++|. +.+++.|+++ ++++++++|+.+ +
T Consensus 12 pvLl~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 12 PVMVREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL 90 (301)
T ss_dssp CTTHHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHH
Confidence 346788889988 78889999999999999999999988889999999 9999888653 579999999876 2
Q ss_pred CC----CC-CEEEech
Q 030025 77 VP----NG-DAILIKW 87 (184)
Q Consensus 77 ~~----~~-D~i~~~~ 87 (184)
++ .. |.|++..
T Consensus 91 l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHTTCSCEEEEEEEC
T ss_pred HHhcCCCCCCEEEEcC
Confidence 21 23 9888744
No 271
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.84 E-value=7.1e-09 Score=76.41 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=72.6
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEc--ccCccCCC--
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGG--DMFQSVPN-- 79 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~--d~~~~~~~-- 79 (184)
..+|.+.+. +.+..+|||+|||.|.++..++++.+...++++|+ ..+...+... .++..... |+. .++.
T Consensus 79 L~ei~eK~~-Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~-~l~~~~ 156 (282)
T 3gcz_A 79 LRWMEERGY-VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVF-NMEVIP 156 (282)
T ss_dssp HHHHHHTTS-CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGG-GSCCCC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchh-hcCCCC
Confidence 455666775 88889999999999999999888776667889998 5544333321 23333332 322 2322
Q ss_pred CCEEEechhhh----cCChHHHHHHHHHHHhhCCCC--cEEEEEe
Q 030025 80 GDAILIKWILH----DWSDEHCLKLLKNCHKSIPEG--GKVIVVE 118 (184)
Q Consensus 80 ~D~i~~~~~l~----~~~~~~~~~~l~~~~~~L~pg--G~l~i~~ 118 (184)
.|+|+|..+.. ..+......+|+-+.++|+|| |.+++--
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 39999977665 122222235688888999999 9999844
No 272
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.84 E-value=1.7e-09 Score=83.99 Aligned_cols=101 Identities=11% Similarity=0.076 Sum_probs=72.8
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCceEEEcccCcc--
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQS-- 76 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~~-- 76 (184)
..++..+++.+. .. ..+|||+|||+|.++..+++.. .+++++|. +.+++.|+++ ++++++.+|+.+.
T Consensus 200 ~~l~~~~~~~~~-~~-~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 200 IQMLEWALDVTK-GS-KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHTT-TC-CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHhh-cC-CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHH
Confidence 345566666665 43 4789999999999999988853 58999999 8899888753 5789999998761
Q ss_pred -CC---------------CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 77 -VP---------------NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 77 -~~---------------~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+. .. |+|++.-.-. .+..++.+.|+|+|+++..+
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRS--------GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTT--------CCCHHHHHHHTTSSEEEEEE
T ss_pred HHhhccccccccccccccCCCCEEEECcCcc--------ccHHHHHHHHhCCCEEEEEE
Confidence 21 13 9998742211 23455666677899988865
No 273
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.81 E-value=1.8e-08 Score=76.29 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=73.7
Q ss_pred HHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC------CCceEEEcccCc-cC--C-
Q 030025 11 KILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY------PGVKHVGGDMFQ-SV--P- 78 (184)
Q Consensus 11 ~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~------~~i~~~~~d~~~-~~--~- 78 (184)
.+...+. ..+..+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .++.++.+|+.+ .. +
T Consensus 93 l~~~~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 93 LPAMLLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp HHHHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGG
T ss_pred HHHHHhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccc
Confidence 3344555 6778999999999999999999874 5689999999 8888877653 579999999876 22 1
Q ss_pred -CC-CEEEec------hhhhcCChH----------------HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 79 -NG-DAILIK------WILHDWSDE----------------HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 79 -~~-D~i~~~------~~l~~~~~~----------------~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.. |.|++. .++..-++. ...++|+.+.++++ ||+|+.+.-
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 23 999862 222221110 01257888888886 898887553
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.80 E-value=3.2e-09 Score=87.12 Aligned_cols=110 Identities=17% Similarity=0.166 Sum_probs=74.3
Q ss_pred HHhHHHHHHHhcC---CCCCCeEEEecCCcChHHHHHH---hhC-CCCeEEEeechhHhhhCCCC-------CCceEEEc
Q 030025 6 TLVLQKILEAYKG---FEHIKQLVDVGGSLGNTLKAIT---SKY-PHIKGINFDLPHVIQHSPEY-------PGVKHVGG 71 (184)
Q Consensus 6 ~~~~~~l~~~~~~---~~~~~~ilDiG~G~G~~~~~l~---~~~-~~~~~~~~D~~~~~~~a~~~-------~~i~~~~~ 71 (184)
+.+.+.+.+..+. ..+...|||||||+|-++...+ ++. ..+++.+++.+.+...+++. ++|+++.+
T Consensus 339 ~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~g 418 (637)
T 4gqb_A 339 QAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSS 418 (637)
T ss_dssp HHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEES
T ss_pred HHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeC
Confidence 3444455544331 2234679999999998844333 332 33478999984455555442 67999999
Q ss_pred ccCc-cCCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEE
Q 030025 72 DMFQ-SVPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVI 115 (184)
Q Consensus 72 d~~~-~~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 115 (184)
|+++ ..|+. |+||+.+.=..+..+-..+++....|.|||||.++
T Consensus 419 d~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 419 DMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9999 67766 99999665444433434467888899999999875
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.78 E-value=1.7e-08 Score=74.59 Aligned_cols=105 Identities=15% Similarity=0.193 Sum_probs=73.6
Q ss_pred HHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-h-------hHhhhCCCC-------CCceEEEcccCcc
Q 030025 12 ILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-P-------HVIQHSPEY-------PGVKHVGGDMFQS 76 (184)
Q Consensus 12 l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~-------~~~~~a~~~-------~~i~~~~~d~~~~ 76 (184)
+.+.+. ..+..+|||+|||+|..+..+++. ..+++++|. + .+++.++++ ++++++.+|+.+.
T Consensus 75 l~~a~~-~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 75 IAKAVN-HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ 151 (258)
T ss_dssp HHHHTT-GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH
T ss_pred HHHHhC-cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH
Confidence 444444 556789999999999999999986 568999999 8 888888654 3599999999762
Q ss_pred ---CC---CC-CEEEechhhhcCC------------------hHHHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 77 ---VP---NG-DAILIKWILHDWS------------------DEHCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 77 ---~~---~~-D~i~~~~~l~~~~------------------~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
++ .. |+|++.-.+++.. +++...+++.+.++.+. ++++..+..
T Consensus 152 l~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~l~~~~~d~~~ll~~a~~~~~~--~vvvk~p~~ 219 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKK--RVVVKRPRL 219 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC-------------HHHHHHHSHHHHHHHHHHHHHHHCSS--EEEEEEETT
T ss_pred HHhhhccCCCccEEEECCCCCCcccchHHHHHHHHhhhhcCCCccHHHHHHHHHHhcCc--EEEEEcCCC
Confidence 33 33 9999865544321 12344667777777643 567766554
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.77 E-value=1e-08 Score=84.40 Aligned_cols=95 Identities=16% Similarity=0.065 Sum_probs=65.9
Q ss_pred CCCeEEEecCCcChHHHHHHhhC-------------CCCeEEEeec-hhHhhhCCC-----C-CCceEEEcccCc-cC--
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY-------------PHIKGINFDL-PHVIQHSPE-----Y-PGVKHVGGDMFQ-SV-- 77 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~-------------~~~~~~~~D~-~~~~~~a~~-----~-~~i~~~~~d~~~-~~-- 77 (184)
+...|||||||+|-++...+... ...++++++. +.+....+. . ++|+++.+|+++ ..
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 35689999999999964332221 2358999998 544332222 1 569999999998 44
Q ss_pred ----CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEE
Q 030025 78 ----PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVI 115 (184)
Q Consensus 78 ----~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 115 (184)
+.. |+||+.+.-.....+-..++|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 344 99999776444333333468888899999999865
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.75 E-value=1.3e-08 Score=79.10 Aligned_cols=92 Identities=12% Similarity=0.008 Sum_probs=71.4
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---C------------------CceEEEcccCcc--
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---P------------------GVKHVGGDMFQS-- 76 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---~------------------~i~~~~~d~~~~-- 76 (184)
+..+|||+|||+|..+..++++.+..+++++|+ +.+++.++++ + +++++.+|+.+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 478999999999999999999987789999999 8888777643 2 378899998762
Q ss_pred -CCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 77 -VPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 77 -~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+.. |+|++. ... .. ..+++.+.+.|+|||.++++-
T Consensus 127 ~~~~~fD~I~lD-P~~---~~--~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLD-PFG---SP--MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEEC-CSS---CC--HHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeC-CCC---CH--HHHHHHHHHhcCCCCEEEEEe
Confidence 2333 999853 222 11 368999999999999887754
No 278
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.69 E-value=6e-08 Score=81.09 Aligned_cols=115 Identities=14% Similarity=0.037 Sum_probs=82.8
Q ss_pred ccHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC----------------------------------------
Q 030025 4 HTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY---------------------------------------- 43 (184)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~---------------------------------------- 43 (184)
....++..++.... +.+..+|+|.+||+|.++...+...
T Consensus 174 l~e~LAa~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 174 IKETLAAAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SCHHHHHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 34567888888877 8888999999999999998877642
Q ss_pred --CCCeEEEeec-hhHhhhCCCC-------CCceEEEcccCc-c--CCC-C-CEEEechhhhc-CC-hHHHHHHHHH---
Q 030025 44 --PHIKGINFDL-PHVIQHSPEY-------PGVKHVGGDMFQ-S--VPN-G-DAILIKWILHD-WS-DEHCLKLLKN--- 103 (184)
Q Consensus 44 --~~~~~~~~D~-~~~~~~a~~~-------~~i~~~~~d~~~-~--~~~-~-D~i~~~~~l~~-~~-~~~~~~~l~~--- 103 (184)
+..+++|+|+ +.+++.|+.+ ..+++.++|+.+ . .+. . |+|+++-.... +. .++...+++.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 2368999999 9999988875 348999999987 2 222 3 99999765543 22 2233344444
Q ss_pred HHhhCCCCcEEEEEee
Q 030025 104 CHKSIPEGGKVIVVES 119 (184)
Q Consensus 104 ~~~~L~pgG~l~i~~~ 119 (184)
..+.+.|||.+++...
T Consensus 333 ~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 333 IMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHCTTCEEEEEES
T ss_pred HHHhhCCCCeEEEEeC
Confidence 4444568999988654
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.66 E-value=2.3e-08 Score=81.29 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=82.8
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC------------------CCeEEEeec-hhHhhhCCCC---
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP------------------HIKGINFDL-PHVIQHSPEY--- 63 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~------------------~~~~~~~D~-~~~~~~a~~~--- 63 (184)
..+++.|++.+. ..+..+|+|.|||+|.++..+++... ...++|+|+ +.+++.|+..
T Consensus 155 ~~iv~~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 155 RPLIKTIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp HHHHHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 456677777776 56678999999999999988876531 247999999 8888877542
Q ss_pred ---CC-----ceEEEcccCc-c-CC--CCCEEEechhhhcCCh------------HHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 64 ---PG-----VKHVGGDMFQ-S-VP--NGDAILIKWILHDWSD------------EHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 64 ---~~-----i~~~~~d~~~-~-~~--~~D~i~~~~~l~~~~~------------~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+ +.+.++|... + .+ ..|+|+++-.+..... .....++..+.+.|+|||++.+.-+
T Consensus 234 ~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 234 HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 33 7889999876 3 22 2399999765554211 1123789999999999999988654
No 280
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.60 E-value=3e-08 Score=77.31 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=71.8
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCCC------CC--ceEEEcccCcc----CCCC-CEEE
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPEY------PG--VKHVGGDMFQS----VPNG-DAIL 84 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~------~~--i~~~~~d~~~~----~~~~-D~i~ 84 (184)
.+..+|||++||+|.++..++++..+ .+++++|+ +.+++.++++ .+ ++++.+|+.+. .+.. |+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 35689999999999999999998654 58999999 8888888764 23 88999998762 2233 9998
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+.- . ... ..+++.+.+.|+|||.|+++-
T Consensus 131 lDP-~---g~~--~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---GTP--VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S---SCC--HHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C---cCH--HHHHHHHHHHhCCCCEEEEEe
Confidence 854 1 211 258999999999999887755
No 281
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.59 E-value=5.1e-07 Score=67.06 Aligned_cols=108 Identities=12% Similarity=0.082 Sum_probs=68.4
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEc--ccCccCCC-C
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGG--DMFQSVPN-G 80 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~--d~~~~~~~-~ 80 (184)
...+.+. .-+.+..+|||+||++|.++..++++.+...+.++|+ ..+....... .++..... |+..-.+. .
T Consensus 70 L~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~ 148 (300)
T 3eld_A 70 IRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPS 148 (300)
T ss_dssp HHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCC
T ss_pred HHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCc
Confidence 3444455 4367889999999999999999998766567888988 4432222210 12322222 22221122 3
Q ss_pred CEEEechhhhcCC-----hHHHHHHHHHHHhhCCCC-cEEEEEe
Q 030025 81 DAILIKWILHDWS-----DEHCLKLLKNCHKSIPEG-GKVIVVE 118 (184)
Q Consensus 81 D~i~~~~~l~~~~-----~~~~~~~l~~~~~~L~pg-G~l~i~~ 118 (184)
|+|++..+.. -+ ......+|+-+.++|+|| |.+++--
T Consensus 149 DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 149 DTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp SEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred CEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 9999966655 22 112235688889999999 9999853
No 282
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.57 E-value=5.5e-07 Score=64.65 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=75.9
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhh---CCCC--CCceEEEc-ccCc-cC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQH---SPEY--PGVKHVGG-DMFQ-SV 77 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~---a~~~--~~i~~~~~-d~~~-~~ 77 (184)
..=...+.+.+. +.+..+|+|+||++|.++..++......++.++|+ ..-.+. .+.+ +.++|..+ |+.. +.
T Consensus 64 ~~KL~ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~ 142 (267)
T 3p8z_A 64 SAKLQWFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPP 142 (267)
T ss_dssp HHHHHHHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCC
T ss_pred HHHHHHHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCC
Confidence 334566777776 88889999999999999998888876668999998 332221 1222 78999999 8765 32
Q ss_pred CCCCEEEechhhhcC----ChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 78 PNGDAILIKWILHDW----SDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 78 ~~~D~i~~~~~l~~~----~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
...|+|+|.-.=..- +.....++|+-+.++|++ |-+++
T Consensus 143 ~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 143 EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 234999884433221 111223578888999999 77777
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.46 E-value=1.8e-06 Score=72.46 Aligned_cols=114 Identities=8% Similarity=0.019 Sum_probs=75.6
Q ss_pred HHhHHHHHHH----hc-CCCCCCeEEEecCCcChHHHHHHhhCC---CCeEEEeec-hhHhhhC--CC----------CC
Q 030025 6 TLVLQKILEA----YK-GFEHIKQLVDVGGSLGNTLKAITSKYP---HIKGINFDL-PHVIQHS--PE----------YP 64 (184)
Q Consensus 6 ~~~~~~l~~~----~~-~~~~~~~ilDiG~G~G~~~~~l~~~~~---~~~~~~~D~-~~~~~~a--~~----------~~ 64 (184)
..++..|++. ++ ...+..+|||.|||+|.++..++++.+ ..+++|+|+ +.+++.| +. ..
T Consensus 301 ~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~ 380 (878)
T 3s1s_A 301 IELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNN 380 (878)
T ss_dssp HHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTB
T ss_pred HHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCC
Confidence 3455555554 22 134578999999999999999998764 358999999 8777766 21 12
Q ss_pred CceEEEcccCcc--CC-C-CCEEEechhhhc-CC-hHH-------------------------HHHHHHHHHhhCCCCcE
Q 030025 65 GVKHVGGDMFQS--VP-N-GDAILIKWILHD-WS-DEH-------------------------CLKLLKNCHKSIPEGGK 113 (184)
Q Consensus 65 ~i~~~~~d~~~~--~~-~-~D~i~~~~~l~~-~~-~~~-------------------------~~~~l~~~~~~L~pgG~ 113 (184)
...+...|+..+ .+ . .|+|+++-.+.. .. +.+ ...++..+.+.|+|||+
T Consensus 381 ~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGr 460 (878)
T 3s1s_A 381 APTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTV 460 (878)
T ss_dssp CCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCE
T ss_pred cceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcE
Confidence 235566666652 11 2 399999665521 11 110 23478889999999999
Q ss_pred EEEEee
Q 030025 114 VIVVES 119 (184)
Q Consensus 114 l~i~~~ 119 (184)
+.+.-+
T Consensus 461 LAfIlP 466 (878)
T 3s1s_A 461 ISAIMP 466 (878)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 998654
No 284
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.46 E-value=1.1e-06 Score=63.97 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=67.7
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hh--HhhhCCCCCCc---eEEEc-ccCccCCC-
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PH--VIQHSPEYPGV---KHVGG-DMFQSVPN- 79 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~--~~~~a~~~~~i---~~~~~-d~~~~~~~- 79 (184)
=..+|.+..- +.+..+|+|+||+.|.++...+++-.-..+.|.++ .+ +.......+++ .+.++ |+.+..+.
T Consensus 61 KL~EIdeK~l-ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~ 139 (269)
T 2px2_A 61 KLRWLVERRF-VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEI 139 (269)
T ss_dssp HHHHHHHTTS-CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCC
T ss_pred HHHHHHHcCC-CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCC
Confidence 3456666764 88999999999999999999888622223344444 22 11111111455 44447 99873333
Q ss_pred CCEEEechhhh---c-CChHHHHHHHHHHHhhCCCCc-EEEEEee
Q 030025 80 GDAILIKWILH---D-WSDEHCLKLLKNCHKSIPEGG-KVIVVES 119 (184)
Q Consensus 80 ~D~i~~~~~l~---~-~~~~~~~~~l~~~~~~L~pgG-~l~i~~~ 119 (184)
.|+|+|--+-. . .+......+|+-+.++|+||| .+++--.
T Consensus 140 ~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVF 184 (269)
T 2px2_A 140 SDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKIL 184 (269)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 49999854332 1 111122235777789999999 8888443
No 285
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.40 E-value=1.7e-06 Score=57.74 Aligned_cols=96 Identities=14% Similarity=0.075 Sum_probs=65.1
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcC-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCC----CCC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLG-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVP----NGD 81 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~----~~D 81 (184)
++.-|.+.+ .+..+|||||||.| ..+..|++.. +..++++|+ +..++ ++..|++++.. .+|
T Consensus 25 LaeYI~~~~---~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~D 91 (153)
T 2k4m_A 25 LAVYIIRCS---GPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAA 91 (153)
T ss_dssp HHHHHHHHS---CSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEE
T ss_pred HHHHHHhcC---CCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccccc---------eEEccCCCCcccccCCcC
Confidence 344444443 34579999999999 5998888743 678999998 65554 89999998543 349
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCC
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPE 123 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 123 (184)
+|++...- +|.+..+-++.+.. |.-++|.-...+.
T Consensus 92 LIYsirPP-----~El~~~i~~lA~~v--~adliI~pL~~E~ 126 (153)
T 2k4m_A 92 LIYSIRPP-----AEIHSSLMRVADAV--GARLIIKPLTGED 126 (153)
T ss_dssp EEEEESCC-----TTTHHHHHHHHHHH--TCEEEEECBTTBC
T ss_pred EEEEcCCC-----HHHHHHHHHHHHHc--CCCEEEEcCCCCc
Confidence 99885543 34444555566654 6668876544433
No 286
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.40 E-value=8.7e-07 Score=62.82 Aligned_cols=89 Identities=12% Similarity=0.112 Sum_probs=63.2
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC---------CCceEEEcccCcc-------------
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY---------PGVKHVGGDMFQS------------- 76 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~---------~~i~~~~~d~~~~------------- 76 (184)
.+.++|||+|| |+.+..+++. ++.+++.+|. +...+.++++ .+++++.+|+.+.
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred hCCCEEEEECc--hHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 46789999998 5677777764 4789999998 7777776542 3588999985421
Q ss_pred -----------CC--C-CCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 77 -----------VP--N-GDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 77 -----------~~--~-~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+ . .|+|++-.-.. ...+..+.+.|+|||.+++-+
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCSSCEEEEETT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcCCCeEEEEeC
Confidence 11 2 39999965321 255667789999999986633
No 287
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.38 E-value=1.7e-07 Score=87.45 Aligned_cols=142 Identities=13% Similarity=0.094 Sum_probs=68.6
Q ss_pred CCCeEEEecCCcChHHHHHHhhCC-----CCeEEEeec-hhHhhhCCCC-C--CceEEEcccCcc---CCC-CCEEEech
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYP-----HIKGINFDL-PHVIQHSPEY-P--GVKHVGGDMFQS---VPN-GDAILIKW 87 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~-----~~~~~~~D~-~~~~~~a~~~-~--~i~~~~~d~~~~---~~~-~D~i~~~~ 87 (184)
+..+|||||.|+|..+..+++... ..+++..|+ +.+.+.++++ . ++..-..|..++ .+. +|+|+..+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 467999999999988877776642 236888898 7777777765 1 222222333332 222 39999999
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCce
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSG 167 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 167 (184)
++|--++. ...+++++++|||||++++.+....... .....+ .... ........+.++|.++|+++||+.
T Consensus 1320 vl~~t~~~--~~~l~~~~~lL~p~G~l~~~e~~~~~~~-g~~~~~----~~~~---~r~~~~~~~~~~w~~~l~~~gf~~ 1389 (2512)
T 2vz8_A 1320 ALATLGDP--AVAVGNMAATLKEGGFLLLHTLLAGHPL-GEMVGF----LTSP---EQGGRHLLSQDQWESLFAGASLHL 1389 (2512)
T ss_dssp C----------------------CCEEEEEEC----------------------------------CTTTTSSTTTTEEE
T ss_pred cccccccH--HHHHHHHHHhcCCCcEEEEEeccccccc-cccccc----cccc---cccCCcccCHHHHHHHHHhCCCce
Confidence 99854433 4689999999999999999775321100 000000 0000 000112346788999999999998
Q ss_pred eEEEe
Q 030025 168 IRFVC 172 (184)
Q Consensus 168 i~~~~ 172 (184)
+....
T Consensus 1390 ~~~~~ 1394 (2512)
T 2vz8_A 1390 VALKR 1394 (2512)
T ss_dssp EEEEE
T ss_pred eeecc
Confidence 76643
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.38 E-value=1.1e-07 Score=70.03 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=58.0
Q ss_pred HHHHHHhcCCCCC--CeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhH-------hhhCCCC--------CCceEEEc
Q 030025 10 QKILEAYKGFEHI--KQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHV-------IQHSPEY--------PGVKHVGG 71 (184)
Q Consensus 10 ~~l~~~~~~~~~~--~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~-------~~~a~~~--------~~i~~~~~ 71 (184)
+.+.+.+. +.+. .+|||++||+|..+..++++ ..+++++|. +.+ ++.+++. .+++++.+
T Consensus 76 e~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 76 EAVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp SHHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred HHHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 45556665 6666 89999999999999999998 458999998 644 3333211 36899999
Q ss_pred ccCcc---CCCC-CEEEechhhhc
Q 030025 72 DMFQS---VPNG-DAILIKWILHD 91 (184)
Q Consensus 72 d~~~~---~~~~-D~i~~~~~l~~ 91 (184)
|..+. ++.. |+|++.-.+.+
T Consensus 153 D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 153 SSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp CHHHHSTTCSSCCSEEEECCCCCC
T ss_pred CHHHHHHhCcccCCEEEEcCCCCC
Confidence 98762 3334 99999777655
No 289
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.37 E-value=1.1e-07 Score=77.19 Aligned_cols=113 Identities=11% Similarity=0.102 Sum_probs=77.9
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC---------------CCeEEEeec-hhHhhhCCCC-----
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP---------------HIKGINFDL-PHVIQHSPEY----- 63 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~---------------~~~~~~~D~-~~~~~~a~~~----- 63 (184)
...+++.|++.+. .. ..+|+|.+||+|.++..+++... ...+.|+|+ +.+...|+.+
T Consensus 230 P~~Vv~lmv~ll~-p~-~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 230 PKSIVTLIVEMLE-PY-KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CHHHHHHHHHHHC-CC-SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHh-cC-CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 4566777777776 33 34999999999999888765431 468999999 8888877642
Q ss_pred --CCceEEEcccCc-c-CCC-C-CEEEechhhhc--CCh-----------------------H--HHHHHHHHHHhhCCC
Q 030025 64 --PGVKHVGGDMFQ-S-VPN-G-DAILIKWILHD--WSD-----------------------E--HCLKLLKNCHKSIPE 110 (184)
Q Consensus 64 --~~i~~~~~d~~~-~-~~~-~-D~i~~~~~l~~--~~~-----------------------~--~~~~~l~~~~~~L~p 110 (184)
.++.+.++|... + .+. . |+|+++-.+.. +.. . ....++..+.+.|+|
T Consensus 308 i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP 387 (544)
T ss_dssp CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE
T ss_pred CCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc
Confidence 234447788765 3 222 3 99998655442 110 0 112589999999999
Q ss_pred CcEEEEEee
Q 030025 111 GGKVIVVES 119 (184)
Q Consensus 111 gG~l~i~~~ 119 (184)
||++.+.-+
T Consensus 388 gGr~aiVlP 396 (544)
T 3khk_A 388 TGSMALLLA 396 (544)
T ss_dssp EEEEEEEEE
T ss_pred CceEEEEec
Confidence 999888654
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.35 E-value=3.5e-06 Score=64.83 Aligned_cols=70 Identities=13% Similarity=0.091 Sum_probs=56.4
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCc-cCCC-C-CEEEechhhh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQ-SVPN-G-DAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~-~~~~-~-D~i~~~~~l~ 90 (184)
+.+..++||+||+.|.++..++++ +.+++++|...|-......++|.+++.|... ..+. . |+|+|-.+.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC
Confidence 567899999999999999999988 5799999985555555566899999999987 3333 3 9999976653
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.34 E-value=4.6e-06 Score=61.81 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=73.3
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhh---hCCCC--CCceEEEc-ccCc-cCCC
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQ---HSPEY--PGVKHVGG-DMFQ-SVPN 79 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~---~a~~~--~~i~~~~~-d~~~-~~~~ 79 (184)
=...+.+... +.+...|||+||++|.++..++.......+.++|+ ..-.+ ..++. +.+.+..+ |+.. +...
T Consensus 82 KL~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 82 KLRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCC
T ss_pred HHHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCC
Confidence 3556667766 88888999999999999998888765567999998 33111 11122 44778777 7665 2223
Q ss_pred CCEEEechhhhcCChH-----HHHHHHHHHHhhCCCC-cEEEE
Q 030025 80 GDAILIKWILHDWSDE-----HCLKLLKNCHKSIPEG-GKVIV 116 (184)
Q Consensus 80 ~D~i~~~~~l~~~~~~-----~~~~~l~~~~~~L~pg-G~l~i 116 (184)
.|+|+|.-. .--+.+ ...++|+-+.++|++| |-+++
T Consensus 161 ~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE
Confidence 499988554 322221 2235788889999999 88887
No 292
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=98.28 E-value=2.4e-06 Score=64.68 Aligned_cols=145 Identities=14% Similarity=0.060 Sum_probs=93.3
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCC---------CCCceEEEcccCccC----------CCC
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPE---------YPGVKHVGGDMFQSV----------PNG 80 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~---------~~~i~~~~~d~~~~~----------~~~ 80 (184)
.+...|+++|||.-.....+.. .+.++++.+|.|.+++..++ .++..++..|+.+.+ ++.
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLDW-PTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSA 179 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSCC-CTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTS
T ss_pred hCCCeEEEeCCCCCchhhhccC-CCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCC
Confidence 3456899999999988766542 22489999998766654432 256788999987521 112
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhh-hhHhhhh------CCCccc-c
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLA-DVLVMTQ------YPGGKE-R 151 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~-~ 151 (184)
-++++..+++++++++...+++.+...+.||+.+++... .++... .......+. ....... ...... .
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~-~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 256 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETS-PLHGDE--WREQMQLRFRRVSDALGFEQAVDVQELIYHD 256 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECC-CTTCSH--HHHHHHHHHHHHHC-----------CCTTCC
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEec-CCCCcc--hhHHHHHHHHHHHHHcCCcCCCCccccccCC
Confidence 577889999999998888999999999999998877543 222100 000000011 1110000 011222 2
Q ss_pred C-HHHHHHHHHHcCCcee
Q 030025 152 T-KHEFTTLATEAGFSGI 168 (184)
Q Consensus 152 ~-~~~~~~~l~~aGf~~i 168 (184)
+ .++..++|.+.||+.+
T Consensus 257 ~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 257 ENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp TTCCCHHHHHTTTTEEEE
T ss_pred CChHHHHHHHHHCcCccc
Confidence 5 7899999999999977
No 293
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.27 E-value=2.7e-06 Score=63.42 Aligned_cols=105 Identities=18% Similarity=0.122 Sum_probs=72.3
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-----CCCeEEEeec-hhH--------------------------h
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-----PHIKGINFDL-PHV--------------------------I 57 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-----~~~~~~~~D~-~~~--------------------------~ 57 (184)
..+++.+.....++.|||+|+..|..+..+++.. ++.+++++|. ..+ +
T Consensus 95 ~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~ 174 (282)
T 2wk1_A 95 RQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSE 174 (282)
T ss_dssp HHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCH
T ss_pred HHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHH
Confidence 3444443323457899999999999999887654 4778999995 322 1
Q ss_pred hhCCC--------CCCceEEEcccCcc---CCC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 58 QHSPE--------YPGVKHVGGDMFQS---VPN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 58 ~~a~~--------~~~i~~~~~d~~~~---~~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+.+++ .++++++.+|+.+. .+. . |+|++-.-.+ +.....|+.+.+.|+|||.+++-+
T Consensus 175 ~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 175 EEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp HHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 12222 15799999999873 222 2 8888865432 234578999999999999988844
No 294
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.26 E-value=3.6e-06 Score=68.33 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=80.1
Q ss_pred HHhHHHHHHHhcC---CCCCCeEEEecCCcChHHHHHHhhC---CCCeEEEeec-hhHhhhCCCC--------CCceEEE
Q 030025 6 TLVLQKILEAYKG---FEHIKQLVDVGGSLGNTLKAITSKY---PHIKGINFDL-PHVIQHSPEY--------PGVKHVG 70 (184)
Q Consensus 6 ~~~~~~l~~~~~~---~~~~~~ilDiG~G~G~~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~--------~~i~~~~ 70 (184)
..+++.|++.+.. ..+..+|+|.+||+|.++..+++.. +...+.|+|+ +.+...|+.+ +++.+..
T Consensus 203 ~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~ 282 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEe
Confidence 4566666666652 1256799999999999999988874 3578999999 8888877642 3567899
Q ss_pred cccCc-cCC---C-C-CEEEechhhhc-C------------------C---hHHHHHHHHHHHhhCC-CCcEEEEEee
Q 030025 71 GDMFQ-SVP---N-G-DAILIKWILHD-W------------------S---DEHCLKLLKNCHKSIP-EGGKVIVVES 119 (184)
Q Consensus 71 ~d~~~-~~~---~-~-D~i~~~~~l~~-~------------------~---~~~~~~~l~~~~~~L~-pgG~l~i~~~ 119 (184)
+|... +++ . . |+|+++-.+.. + + ..+ ..++..+.+.|+ |||++.+.-+
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEEEE
T ss_pred cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEEec
Confidence 99876 332 2 2 99998633321 1 0 111 258999999999 9999988554
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.26 E-value=7e-07 Score=68.91 Aligned_cols=108 Identities=16% Similarity=0.090 Sum_probs=75.8
Q ss_pred HHHHHHHhcC-CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--------------CCceEEEcc
Q 030025 9 LQKILEAYKG-FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--------------PGVKHVGGD 72 (184)
Q Consensus 9 ~~~l~~~~~~-~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------------~~i~~~~~d 72 (184)
..+++-+.+. ..++++||=||.|.|..++.+++. +..+++.+|+ +.+++.++++ ++++++.+|
T Consensus 192 Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~D 270 (381)
T 3c6k_A 192 YTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 270 (381)
T ss_dssp HHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred HHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHH
Confidence 4444444442 235689999999999999999985 4579999999 9998887653 458889999
Q ss_pred cCccC------C-CCCEEEechhhh-------cCCh-HHHHHHHHHHHhhCCCCcEEEEE
Q 030025 73 MFQSV------P-NGDAILIKWILH-------DWSD-EHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 73 ~~~~~------~-~~D~i~~~~~l~-------~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
..+.+ . .+|+|+.-..-. .... .-..++++.+++.|+|||.++..
T Consensus 271 a~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 271 CIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 87521 1 239998853211 1111 11247899999999999998874
No 296
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=98.25 E-value=0.00016 Score=55.10 Aligned_cols=146 Identities=16% Similarity=0.152 Sum_probs=100.4
Q ss_pred CCCeEEEecCCcChHHHHHHhh-CCCCeEEEeechhHhhhCC-----------------------------CCCCceEEE
Q 030025 21 HIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDLPHVIQHSP-----------------------------EYPGVKHVG 70 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~~~~~~~a~-----------------------------~~~~i~~~~ 70 (184)
+...|+-+|||.-.....+... .+.+++..+|.|++++.-+ ..++..++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4679999999999999888875 3678999999866554311 025678899
Q ss_pred cccCc--cC---------C-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhh
Q 030025 71 GDMFQ--SV---------P-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLA 137 (184)
Q Consensus 71 ~d~~~--~~---------~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~ 137 (184)
.|+.+ .+ . +. -++++.+++.+++.++...+|+.+.+.. |+|.+++.|+..++.. ....+.
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~------fg~~M~ 242 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDR------FGQIMI 242 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSH------HHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCH------HHHHHH
Confidence 99876 22 1 12 5788999999999999999999999987 5667777787754321 101111
Q ss_pred hhHhhhhC--CCc-cccCHHHHHHHHHHcCCceeEEEee
Q 030025 138 DVLVMTQY--PGG-KERTKHEFTTLATEAGFSGIRFVCF 173 (184)
Q Consensus 138 ~~~~~~~~--~~~-~~~~~~~~~~~l~~aGf~~i~~~~~ 173 (184)
........ .+. .+.+.++..++|+++||+.++....
T Consensus 243 ~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 243 ENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp HHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 11100000 111 3458899999999999998776543
No 297
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.18 E-value=9.6e-07 Score=69.13 Aligned_cols=66 Identities=23% Similarity=0.299 Sum_probs=52.9
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--------CCceEEEcccCcc--C---CCCCEEE
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--------PGVKHVGGDMFQS--V---PNGDAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------~~i~~~~~d~~~~--~---~~~D~i~ 84 (184)
+.+..+|||+|||+|..+..+++. ..+++++|. +.+++.|+++ .+++++++|+.+. . ...|+|+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEE
Confidence 344789999999999999988887 469999999 8899888654 3589999999873 1 1239998
Q ss_pred ec
Q 030025 85 IK 86 (184)
Q Consensus 85 ~~ 86 (184)
+.
T Consensus 169 lD 170 (410)
T 3ll7_A 169 VD 170 (410)
T ss_dssp EC
T ss_pred EC
Confidence 83
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.16 E-value=3.6e-06 Score=62.34 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=63.7
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--CCceEEEcccCc-c--C-
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQ-S--V- 77 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~-~--~- 77 (184)
..-+.+.+++.+. ..+++.++|.+||.|..+..++++ +.+++++|. +.+++.+++. +++.++++++.+ . +
T Consensus 7 ~pVLl~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 7 VPVLYQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp CCTTHHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHH
T ss_pred hhHHHHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHH
Confidence 3456888999998 888999999999999999999998 679999999 8888766442 579999999876 1 1
Q ss_pred --C-CC-CEEEec
Q 030025 78 --P-NG-DAILIK 86 (184)
Q Consensus 78 --~-~~-D~i~~~ 86 (184)
+ .. |.|++.
T Consensus 84 ~~g~~~vDgIL~D 96 (285)
T 1wg8_A 84 ALGVERVDGILAD 96 (285)
T ss_dssp HTTCSCEEEEEEE
T ss_pred HcCCCCcCEEEeC
Confidence 1 23 888764
No 299
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.96 E-value=8e-05 Score=62.31 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=98.5
Q ss_pred CCCeEEEecCCcChHHHHHHhhCC--------CCeEEEeechhHhhhCCCC-----------------------------
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYP--------HIKGINFDLPHVIQHSPEY----------------------------- 63 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~--------~~~~~~~D~~~~~~~a~~~----------------------------- 63 (184)
+...|+-+|||.-....++....+ .+++..+|.|+.++.-++.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 568999999999999999987754 6789999976554321110
Q ss_pred -CCceEEEcccCc--cC----------C-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCC
Q 030025 64 -PGVKHVGGDMFQ--SV----------P-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENG 128 (184)
Q Consensus 64 -~~i~~~~~d~~~--~~----------~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 128 (184)
++..++..|+.+ .+ . +. -++++..++.+++.++...+|+.+.+. |+|.+++.|...+.....+
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d~ 264 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFEP 264 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTSH
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCCh
Confidence 267888999976 21 2 22 577889999999999999999999864 7888888887765421111
Q ss_pred ccccchhhh-hhHhhhh-CCC-ccccCHHHHHHHHHHcCCceeEEEe
Q 030025 129 THSKINSLA-DVLVMTQ-YPG-GKERTKHEFTTLATEAGFSGIRFVC 172 (184)
Q Consensus 129 ~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~l~~aGf~~i~~~~ 172 (184)
....+. .+..... ... ....+.++..++|.+.||+.+....
T Consensus 265 ---f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 265 ---FSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGD 308 (695)
T ss_dssp ---HHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEE
T ss_pred ---HHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceee
Confidence 001111 1111000 000 1234799999999999998766543
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.90 E-value=7e-05 Score=56.24 Aligned_cols=122 Identities=19% Similarity=0.186 Sum_probs=71.9
Q ss_pred CCCeEEEecCCcChHHHHHH----hhCCCCeEEEeec-hhHhhhCCC------------------C--C--CceEEEccc
Q 030025 21 HIKQLVDVGGSLGNTLKAIT----SKYPHIKGINFDL-PHVIQHSPE------------------Y--P--GVKHVGGDM 73 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~----~~~~~~~~~~~D~-~~~~~~a~~------------------~--~--~i~~~~~d~ 73 (184)
+.-+|||+|=|||.+....+ +..|..++..+.. ...++.... . . .+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 44689999999998764433 3456665544432 111111100 0 1 245677888
Q ss_pred Cc---cCCC-C-CEEEech-hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCC
Q 030025 74 FQ---SVPN-G-DAILIKW-ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPG 147 (184)
Q Consensus 74 ~~---~~~~-~-D~i~~~~-~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (184)
.+ .++. . |+|+.-. +-..=|+=....+|+.++++++|||+|.-..
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt----------------------------- 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS----------------------------- 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC-----------------------------
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe-----------------------------
Confidence 76 2333 2 8888733 1111011122478999999999999876411
Q ss_pred ccccCHHHHHHHHHHcCCceeEEEeecC
Q 030025 148 GKERTKHEFTTLATEAGFSGIRFVCFFH 175 (184)
Q Consensus 148 ~~~~~~~~~~~~l~~aGf~~i~~~~~~~ 175 (184)
....+++-|+++||++.+....++
T Consensus 227 ----aag~VRR~L~~aGF~V~k~~G~g~ 250 (308)
T 3vyw_A 227 ----SSLSVRKSLLTLGFKVGSSREIGR 250 (308)
T ss_dssp ----CCHHHHHHHHHTTCEEEEEECC--
T ss_pred ----CcHHHHHHHHHCCCEEEecCCCCC
Confidence 245678889999999777665443
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.84 E-value=2.4e-05 Score=60.07 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=54.8
Q ss_pred cHHhHHHHHHHhcCCCC------CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCC---CCCCceEEEcccC
Q 030025 5 TTLVLQKILEAYKGFEH------IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSP---EYPGVKHVGGDMF 74 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~------~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~---~~~~i~~~~~d~~ 74 (184)
+..++++|++++. +.+ ...|||||+|.|.+|..|+++....+++++++ +.++...+ ..++++++.+|+.
T Consensus 37 d~~i~~~Iv~~~~-l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l 115 (353)
T 1i4w_A 37 NPTVYNKIFDKLD-LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPY 115 (353)
T ss_dssp CHHHHHHHHHHHC-GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTT
T ss_pred CHHHHHHHHHhcc-CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCcc
Confidence 5678899999987 653 48899999999999999998744457888887 65554333 3478999999997
Q ss_pred c
Q 030025 75 Q 75 (184)
Q Consensus 75 ~ 75 (184)
+
T Consensus 116 ~ 116 (353)
T 1i4w_A 116 D 116 (353)
T ss_dssp C
T ss_pred c
Confidence 5
No 302
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.78 E-value=7.1e-05 Score=56.80 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=58.0
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC--CCceEEEcccCc
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY--PGVKHVGGDMFQ 75 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d~~~ 75 (184)
-+.+++++.+. ..+++.++|..||.|..+..++++. |..+++++|. +.+++.++.. +++.++++++.+
T Consensus 44 VLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 44 VLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp TTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred ccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 36788899998 8889999999999999999999984 7889999999 9999887532 568888887765
No 303
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.78 E-value=3.9e-05 Score=59.11 Aligned_cols=109 Identities=17% Similarity=0.099 Sum_probs=73.4
Q ss_pred HHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC------------CCCceEEEcccCc--c
Q 030025 12 ILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE------------YPGVKHVGGDMFQ--S 76 (184)
Q Consensus 12 l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------------~~~i~~~~~d~~~--~ 76 (184)
....+. .+++.+|||+++|.|.-+..+++......++++|+ +.-++..++ ..++.....|... .
T Consensus 140 ~~~~L~-~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 140 PVLALG-LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHC-CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHhC-CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 344455 77889999999999999999999877678999997 443332221 1467888888776 2
Q ss_pred -CCCC-CEEEec----h----hhh-------cCChH-------HHHHHHHHHHhhCCCCcEEEEEeeec
Q 030025 77 -VPNG-DAILIK----W----ILH-------DWSDE-------HCLKLLKNCHKSIPEGGKVIVVESVL 121 (184)
Q Consensus 77 -~~~~-D~i~~~----~----~l~-------~~~~~-------~~~~~l~~~~~~L~pgG~l~i~~~~~ 121 (184)
.+.. |.|++- . ++. .+... -..++|+.+.+.|||||+|+-++=..
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 2333 888752 2 111 11111 11368899999999999998866433
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.64 E-value=0.00019 Score=53.31 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=64.0
Q ss_pred HHHHHHHhcC----CCCCCeEEEecC------CcChHHHHHHhhCCC-CeEEEeechhHhhhCCCCCCceEEEcccCc-c
Q 030025 9 LQKILEAYKG----FEHIKQLVDVGG------SLGNTLKAITSKYPH-IKGINFDLPHVIQHSPEYPGVKHVGGDMFQ-S 76 (184)
Q Consensus 9 ~~~l~~~~~~----~~~~~~ilDiG~------G~G~~~~~l~~~~~~-~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~-~ 76 (184)
..++++.++. .+...+|||+|+ -.|.+ .+.+..|. ..++++|+.++... .+ .++++|... .
T Consensus 93 ytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sd----a~-~~IqGD~~~~~ 165 (344)
T 3r24_A 93 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSD----AD-STLIGDCATVH 165 (344)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCS----SS-EEEESCGGGEE
T ss_pred HHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccC----CC-eEEEccccccc
Confidence 3456666541 567899999997 45553 33444676 69999998444322 22 448899765 2
Q ss_pred CCCC-CEEEechh---hhcCChH------HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 77 VPNG-DAILIKWI---LHDWSDE------HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 77 ~~~~-D~i~~~~~---l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+.. |+|++--+ -.+...+ -...+++-+.+.|+|||.+++--
T Consensus 166 ~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 166 TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 2233 99987321 1111111 23356777888999999999953
No 305
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.61 E-value=6.2e-05 Score=56.55 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=44.9
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY 63 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~ 63 (184)
...+...++..+. .+...|||++||+|.++..+++. +.+++++|+ +.+++.|+++
T Consensus 221 p~~l~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 221 PLELAERLVRMFS--FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKER 276 (297)
T ss_dssp CHHHHHHHHHHHC--CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHH
Confidence 3456777777765 56789999999999999988876 468999999 8898887754
No 306
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.57 E-value=0.00035 Score=56.61 Aligned_cols=114 Identities=12% Similarity=0.076 Sum_probs=76.4
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhC-------------CCCeEEEeec-hhHhhhCCCC------C
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKY-------------PHIKGINFDL-PHVIQHSPEY------P 64 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~-------------~~~~~~~~D~-~~~~~~a~~~------~ 64 (184)
.+.+++.|++.+. ..+..+|+|-+||||.++....+.. ....+.|+|+ +.+...|+-+ .
T Consensus 202 P~~Vv~lmv~l~~-p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 202 PRPVVRFMVEVMD-PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp CHHHHHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred cHHHHHHHHHhhc-cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 4567888888877 6677799999999999988776532 1357899998 7777766532 3
Q ss_pred CceEEEcccCc-cC----C--CCCEEEechhhhc---------CC-----hHHHHHHHHHHHhhCC-------CCcEEEE
Q 030025 65 GVKHVGGDMFQ-SV----P--NGDAILIKWILHD---------WS-----DEHCLKLLKNCHKSIP-------EGGKVIV 116 (184)
Q Consensus 65 ~i~~~~~d~~~-~~----~--~~D~i~~~~~l~~---------~~-----~~~~~~~l~~~~~~L~-------pgG~l~i 116 (184)
...+..+|... +. + ..|+|+++-.+.- ++ ......++..+.+.|| |||++.+
T Consensus 281 ~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~av 360 (530)
T 3ufb_A 281 YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAV 360 (530)
T ss_dssp CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEE
T ss_pred cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEE
Confidence 44566777654 22 1 1399998665531 10 1112356777777776 7999988
Q ss_pred Eee
Q 030025 117 VES 119 (184)
Q Consensus 117 ~~~ 119 (184)
.-+
T Consensus 361 VlP 363 (530)
T 3ufb_A 361 VVP 363 (530)
T ss_dssp EEE
T ss_pred Eec
Confidence 654
No 307
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=96.82 E-value=0.0031 Score=42.30 Aligned_cols=112 Identities=13% Similarity=0.149 Sum_probs=68.2
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCC------
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVP------ 78 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~------ 78 (184)
+...+..+.... .-.+.|||+|-|+|.+--.|.+.+|+-++.++|- -.....+ .-+.=.++.+|+.+..+
T Consensus 27 R~~L~~a~~~v~--~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~-~P~~e~~ilGdi~~tL~~~~~r~ 103 (174)
T 3iht_A 27 RACLEHAIAQTA--GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDS-TPPEAQLILGDIRETLPATLERF 103 (174)
T ss_dssp HHHHHHHHHHTT--TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGG-CCCGGGEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc--CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCC-CCchHheecccHHHHHHHHHHhc
Confidence 334444455544 5568899999999999999999999999999994 1111110 01456788888877322
Q ss_pred -CC-CEEEechhhhcCC--hHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 79 -NG-DAILIKWILHDWS--DEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 79 -~~-D~i~~~~~l~~~~--~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.. -++..-.-.++-. ......+=.-+..+|.|||.++...+.
T Consensus 104 g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 104 GATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp CSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred CCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 11 3333322222211 111122333456788999999887665
No 308
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.68 E-value=0.0021 Score=47.13 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=42.6
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE 62 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~ 62 (184)
..+...+++... .+...|||..||+|.++....+. +-+++++|+ +.+++.+++
T Consensus 199 ~~l~~~~i~~~~--~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 199 RDLIERIIRASS--NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp HHHHHHHHHHHC--CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 456777777764 66789999999999999988876 569999999 877776654
No 309
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.24 E-value=0.0064 Score=44.54 Aligned_cols=96 Identities=19% Similarity=0.203 Sum_probs=67.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhh-------CCCCeEEEeec-hhHhhh--------------------------------
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSK-------YPHIKGINFDL-PHVIQH-------------------------------- 59 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~-------~~~~~~~~~D~-~~~~~~-------------------------------- 59 (184)
.-++.|+|+|+-.|..+..++.. .+.-++.++|. ..+-+.
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 45689999999999988887653 35679999993 322210
Q ss_pred --CCCC----CCceEEEcccCccC-------CC-C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 60 --SPEY----PGVKHVGGDMFQSV-------PN-G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 60 --a~~~----~~i~~~~~d~~~~~-------~~-~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+.. ++++++.+++.+.+ +. . |++.+-.=. .+.....++.+...|+|||.+++-+.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 0111 57899999997722 22 2 777775532 23445789999999999999999664
No 310
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.75 E-value=0.0091 Score=49.88 Aligned_cols=118 Identities=15% Similarity=0.195 Sum_probs=71.4
Q ss_pred CCCeEEEecCCcChHHHHHHhhC-------CC-----CeEEEeec-h---hHhhhC-CC--------------C------
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY-------PH-----IKGINFDL-P---HVIQHS-PE--------------Y------ 63 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~-------~~-----~~~~~~D~-~---~~~~~a-~~--------------~------ 63 (184)
+.-+|+|+|-|+|.+...+++.+ |. ++++.++. | +.+..+ .. .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999988887753 22 56788774 3 111111 00 0
Q ss_pred ----------CCceEEEcccCc---cCC----CC-CEEEechhh-hcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCC
Q 030025 64 ----------PGVKHVGGDMFQ---SVP----NG-DAILIKWIL-HDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPEL 124 (184)
Q Consensus 64 ----------~~i~~~~~d~~~---~~~----~~-D~i~~~~~l-~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 124 (184)
-.+++..+|+.+ .++ .. |+++.-..- ..=++--...+|..+.++++|||.+.-..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------ 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC------
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc------
Confidence 135667788765 222 22 888773311 00011011368999999999999865411
Q ss_pred CCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEE
Q 030025 125 PENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFV 171 (184)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~ 171 (184)
....+++.++++||...+..
T Consensus 212 ---------------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 ---------------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ---------------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred ---------------------------CcHHHHHHHHhCCeEEEecc
Confidence 12466788899999877655
No 311
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.13 E-value=0.034 Score=46.30 Aligned_cols=117 Identities=15% Similarity=0.188 Sum_probs=69.3
Q ss_pred CCeEEEecCCcChHHHHHHhhC-------C-----CCeEEEeec-h---hHhhhC-CC--------------C-------
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY-------P-----HIKGINFDL-P---HVIQHS-PE--------------Y------- 63 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~-------~-----~~~~~~~D~-~---~~~~~a-~~--------------~------- 63 (184)
.-+|+|+|-|+|.+....++.+ | .++++.++. | +.+..+ .. .
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999888777653 2 245788773 2 222211 11 0
Q ss_pred ---------CCceEEEcccCc---cCC----CC-CEEEechhhhcC-ChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCC
Q 030025 64 ---------PGVKHVGGDMFQ---SVP----NG-DAILIKWILHDW-SDEHCLKLLKNCHKSIPEGGKVIVVESVLPELP 125 (184)
Q Consensus 64 ---------~~i~~~~~d~~~---~~~----~~-D~i~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 125 (184)
-.++...+|+.+ .+. .. |+|+.-..--.. ++--...+|+.++++++|||.+....
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 113455667654 121 22 888773311000 11112368999999999999876411
Q ss_pred CCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCCceeEEE
Q 030025 126 ENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGFSGIRFV 171 (184)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~i~~~ 171 (184)
....+++.++++||.+....
T Consensus 220 --------------------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 --------------------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp --------------------------CCHHHHHHHHHHTCEEEEEE
T ss_pred --------------------------CcHHHHHHHHhCCeEEEecc
Confidence 12466788899999876654
No 312
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.05 E-value=0.14 Score=39.10 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=73.8
Q ss_pred CCeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCCC-CCceEEEcccCc-c---CC--CCCEEEechhhhcC
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ-S---VP--NGDAILIKWILHDW 92 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~---~~--~~D~i~~~~~l~~~ 92 (184)
..+++|+-||.|.++..+.+..-. -.+.++|. +.+++..+.+ ++..++.+|+.+ . ++ ..|+++.......+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 357999999999999999887421 35788898 7777665553 667788899876 2 22 23999886664444
Q ss_pred Ch--------HHHHHHHHH---HHhhCC--CCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 93 SD--------EHCLKLLKN---CHKSIP--EGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 93 ~~--------~~~~~~l~~---~~~~L~--pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
+. ++...++.+ +.+.++ |. +++.|....- .. ..+.+.+.+.
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l-------------~~-----------~~~~~~i~~~ 135 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGF-------------EV-----------SSTRDLLIQT 135 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCCS--EEEEEEETTG-------------GG-----------SHHHHHHHHH
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCccc-------------cC-----------HHHHHHHHHH
Confidence 21 112224443 344455 65 5555644311 00 0135678888
Q ss_pred HHHcCCceeE
Q 030025 160 ATEAGFSGIR 169 (184)
Q Consensus 160 l~~aGf~~i~ 169 (184)
|++.||....
T Consensus 136 l~~~GY~v~~ 145 (343)
T 1g55_A 136 IENCGFQYQE 145 (343)
T ss_dssp HHHTTEEEEE
T ss_pred HHHCCCeeEE
Confidence 9999987653
No 313
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.88 E-value=0.24 Score=38.27 Aligned_cols=120 Identities=13% Similarity=0.095 Sum_probs=75.1
Q ss_pred CeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC-CCCceEEEcccCc-c---C------CCC-CEEEechhh
Q 030025 23 KQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE-YPGVKHVGGDMFQ-S---V------PNG-DAILIKWIL 89 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-~~~i~~~~~d~~~-~---~------~~~-D~i~~~~~l 89 (184)
.+++|+-||.|.++..+.+..- -.+.++|. +.+.+..+. .++..++.+|+.+ . + +.. |+|+.....
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPC 81 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCC
Confidence 5799999999999999988742 24568888 666655544 3778888899876 1 2 123 999886654
Q ss_pred hcCC-------hHHHHHHHHH---HHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHH
Q 030025 90 HDWS-------DEHCLKLLKN---CHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTL 159 (184)
Q Consensus 90 ~~~~-------~~~~~~~l~~---~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (184)
..++ +++...++.+ +.+.++|. +++.|....-.. .......+++. .
T Consensus 82 Q~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~--~~v~ENV~gl~s---------------------~~~~~~~~~i~-~ 137 (376)
T 3g7u_A 82 QGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL--FFLAENVPGIMQ---------------------EKYSGIRNKAF-N 137 (376)
T ss_dssp CTTC-------CHHHHHHHHHHHHHHHHHCCS--EEEEEECTTTTC---------------------GGGHHHHHHHH-H
T ss_pred CCcccccCCCCCCchHHHHHHHHHHHHHhCCC--EEEEecchHhhc---------------------cCcHHHHHHHH-H
Confidence 4443 1222234443 44446886 677675432110 00011346667 8
Q ss_pred HHHcCCce
Q 030025 160 ATEAGFSG 167 (184)
Q Consensus 160 l~~aGf~~ 167 (184)
|++.||.+
T Consensus 138 l~~~GY~v 145 (376)
T 3g7u_A 138 LVSGDYDI 145 (376)
T ss_dssp HHHTTEEE
T ss_pred HHcCCCcc
Confidence 89999886
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.62 E-value=0.25 Score=37.64 Aligned_cols=96 Identities=9% Similarity=0.023 Sum_probs=61.2
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCC-eEEEeec-hhHhhhCCCCCCceEEEcc------cCcc----CCCC
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHI-KGINFDL-PHVIQHSPEYPGVKHVGGD------MFQS----VPNG 80 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~i~~~~~d------~~~~----~~~~ 80 (184)
+... +.+..+||-+|+|. |..+..+++.. +. +++++|. +.-++.+++..--..+..+ ..+. .+..
T Consensus 165 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 165 RRGG-VTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp HHHT-CCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred HhcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 4445 78889999999874 78888888876 45 8999987 6556666544211222211 1111 1123
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
|+|+-... .+ ..++...+.|+|||++++...
T Consensus 243 ~D~vid~~g-----~~---~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 243 PEVTIECTG-----AE---ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CSEEEECSC-----CH---HHHHHHHHHSCTTCEEEECSC
T ss_pred CCEEEECCC-----Ch---HHHHHHHHHhcCCCEEEEEec
Confidence 88865322 22 357888999999999998654
No 315
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.45 E-value=0.079 Score=41.44 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=34.6
Q ss_pred CCCCCeEEEecCCcChHHHHHH-hhCCC-CeEEEeec-hhHhhhCC
Q 030025 19 FEHIKQLVDVGGSLGNTLKAIT-SKYPH-IKGINFDL-PHVIQHSP 61 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~-~~~~~-~~~~~~D~-~~~~~~a~ 61 (184)
+++...++|||++.|.++..++ +..+. .++++++. |...+..+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~ 269 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQ 269 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHH
Confidence 4678999999999999999988 55654 79999997 76655543
No 316
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.44 E-value=0.25 Score=37.14 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=53.3
Q ss_pred CeEEEecCCc--ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCCCEEEechhhhcCChHHHH
Q 030025 23 KQLVDVGGSL--GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 23 ~~ilDiG~G~--G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.+|.=||+|. +.++..+.+.....++++.|. +..++.+.+..-+.-...|..+ ....+|+|+..-... ...
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-----~~~ 108 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-----TFR 108 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-----GHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-----HHH
Confidence 6899999772 344455555432238999998 6666655443222222233333 334459998854433 345
Q ss_pred HHHHHHHhhCCCCcEEE
Q 030025 99 KLLKNCHKSIPEGGKVI 115 (184)
Q Consensus 99 ~~l~~~~~~L~pgG~l~ 115 (184)
.+++++...++||..++
T Consensus 109 ~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 109 EIAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHHSCTTCEEE
T ss_pred HHHHHHhhccCCCcEEE
Confidence 78899999999987554
No 317
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.43 E-value=0.076 Score=40.37 Aligned_cols=95 Identities=19% Similarity=0.082 Sum_probs=62.4
Q ss_pred HHHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCC-CEEEechhh
Q 030025 13 LEAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNG-DAILIKWIL 89 (184)
Q Consensus 13 ~~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~-D~i~~~~~l 89 (184)
+.... +.+..+||-+|+|. |..+..+++.. +.++++++. +.-++.+++.. ...+..|. +.+... |+|+-...
T Consensus 169 l~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lG-a~~v~~~~-~~~~~~~D~vid~~g- 243 (348)
T 3two_A 169 LKFSK-VTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMG-VKHFYTDP-KQCKEELDFIISTIP- 243 (348)
T ss_dssp HHHTT-CCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTT-CSEEESSG-GGCCSCEEEEEECCC-
T ss_pred HHhcC-CCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcC-CCeecCCH-HHHhcCCCEEEECCC-
Confidence 34445 78899999999874 78888888876 569999986 66666665543 22222222 222224 87765322
Q ss_pred hcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 90 HDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+ ..++.+.+.|+|+|++++...
T Consensus 244 ----~~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 ----TH---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ----SC---CCHHHHHTTEEEEEEEEECCC
T ss_pred ----cH---HHHHHHHHHHhcCCEEEEECC
Confidence 11 247788899999999998653
No 318
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.29 E-value=0.073 Score=39.43 Aligned_cols=95 Identities=13% Similarity=-0.047 Sum_probs=67.3
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC----CCceEEEcccCc----cCC--C-CCEEEechhh
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY----PGVKHVGGDMFQ----SVP--N-GDAILIKWIL 89 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----~~i~~~~~d~~~----~~~--~-~D~i~~~~~l 89 (184)
...+||+=+|||.++..+++. .-+++.+|. +...+..+++ .++.++..|... ..+ . .|+|++-=..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 567899999999999999984 468999998 7777666654 578999999765 112 2 3999986555
Q ss_pred hcCChHHHHHHHHHHHh--hCCCCcEEEEEeee
Q 030025 90 HDWSDEHCLKLLKNCHK--SIPEGGKVIVVESV 120 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~--~L~pgG~l~i~~~~ 120 (184)
+.- .+..++++.+.+ .+.|+|.+++-=+.
T Consensus 170 e~k--~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 170 ERK--EEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CST--THHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCC--cHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 421 233456666655 46789998885444
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.26 E-value=0.24 Score=38.37 Aligned_cols=100 Identities=10% Similarity=-0.022 Sum_probs=63.9
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCC-eEEEeec-hhHhhhCCCCCCceEEEc---cc-Ccc----CCC-C-
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHI-KGINFDL-PHVIQHSPEYPGVKHVGG---DM-FQS----VPN-G- 80 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~i~~~~~---d~-~~~----~~~-~- 80 (184)
.... +++..+||-+|+|. |..+..+++.. .+ +++++|. +.-++.+++.. .+.+.. |. .+. .+. .
T Consensus 179 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lG-a~~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 179 VSAG-VKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAG-FETIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp HHTT-CCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTT-CEEEETTSSSCHHHHHHHHHSSSCE
T ss_pred HHcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcC-CcEEcCCCcchHHHHHHHHhCCCCC
Confidence 4445 78889999999875 88888888875 45 8999997 66777776552 333321 11 110 012 3
Q ss_pred CEEEechhhhc---------CChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 81 DAILIKWILHD---------WSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 81 D~i~~~~~l~~---------~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
|+|+-...-.. .+.+ ..++.+.+.|+|||++++...
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~---~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPN---GALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTT---HHHHHHHHHEEEEEEEECCSC
T ss_pred CEEEECCCCccccccccccccccH---HHHHHHHHHHhcCCEEEEecc
Confidence 88765433211 1111 358889999999999987654
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.22 E-value=0.088 Score=40.38 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=60.9
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc---ccCc---cC-CCC-CEE
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG---DMFQ---SV-PNG-DAI 83 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~---d~~~---~~-~~~-D~i 83 (184)
+... +++..+||-+|+|. |..+..+++.....+++++|. +.-++.+++..--..+.. |..+ .. +.. |+|
T Consensus 184 ~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 184 NALK-VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp TTTC-CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred hccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEE
Confidence 3444 77889999999885 778888887753236888986 666666654321112211 1111 11 113 777
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+-... .+ ..++.+.+.|+|+|++++....
T Consensus 263 id~~g-----~~---~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 263 LESTG-----SP---EILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp EECSC-----CH---HHHHHHHHTEEEEEEEEECCCC
T ss_pred EECCC-----CH---HHHHHHHHHHhcCCEEEEeCCC
Confidence 65322 22 4588899999999999986543
No 321
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.02 E-value=0.15 Score=38.59 Aligned_cols=96 Identities=9% Similarity=0.070 Sum_probs=61.9
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---c----CCCCCEEE
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---S----VPNGDAIL 84 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~----~~~~D~i~ 84 (184)
.... ..+..+||-.|+|. |..+..+++.. +.+++++|. +.-++.+++..--..+..+-.+ . .+..|+++
T Consensus 160 ~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 160 KVTD-TRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp HTTT-CCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred HHcC-CCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 4444 77889999999874 88888888876 569999987 6666666654221222111111 0 11126665
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
-... .. ..++.+.+.|+|+|++++...
T Consensus 238 d~~g-----~~---~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 238 VTAV-----SP---KAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp ESSC-----CH---HHHHHHHHHEEEEEEEEECSC
T ss_pred EeCC-----CH---HHHHHHHHHhccCCEEEEeCC
Confidence 4321 12 468889999999999998643
No 322
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.97 E-value=0.82 Score=30.16 Aligned_cols=96 Identities=14% Similarity=0.043 Sum_probs=52.8
Q ss_pred HhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c------CCCCCEEEe
Q 030025 15 AYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S------VPNGDAILI 85 (184)
Q Consensus 15 ~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~------~~~~D~i~~ 85 (184)
+++...+..+|+=+|+|. |......+... +.+++++|. +..++.+++..++.++.+|..+ . ....|+|+.
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 344345678999998752 33333333333 468999998 6666666533456667677643 1 222388877
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
... +++....+..+.+.+.|...++.
T Consensus 91 ~~~-----~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 91 FTN-----DDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp CSS-----CHHHHHHHHHHHHHTSCCSEEEE
T ss_pred EeC-----CcHHHHHHHHHHHHHCCCCeEEE
Confidence 432 23333455556666666666555
No 323
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.89 E-value=0.24 Score=32.28 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=52.1
Q ss_pred CCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc--C-----CCCCEEEechhhhcC
Q 030025 22 IKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS--V-----PNGDAILIKWILHDW 92 (184)
Q Consensus 22 ~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~--~-----~~~D~i~~~~~l~~~ 92 (184)
..+|+=+|||. |......+.. .+..++++|. ++.++.+++ .++.++.+|..++ + ..+|++++...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~---- 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP---- 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS----
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC----
Confidence 46888898863 4333333333 3568999998 766665544 5788899998762 1 23388776322
Q ss_pred ChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 93 SDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 93 ~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
.+.+. ..+-...+.+.|+.+++.
T Consensus 81 ~~~~n-~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 81 NGYEA-GEIVASARAKNPDIEIIA 103 (140)
T ss_dssp CHHHH-HHHHHHHHHHCSSSEEEE
T ss_pred ChHHH-HHHHHHHHHHCCCCeEEE
Confidence 12222 223345566678877655
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.73 E-value=1.1 Score=33.94 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=60.3
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc----ccCcc----C----CC
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG----DMFQS----V----PN 79 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~----d~~~~----~----~~ 79 (184)
+... +.+..+||-+|+|. |..+..+++.. ..+++++|. +.-++.+++..--..+.. |..+. . +.
T Consensus 162 ~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 162 RRAG-VQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp HHHT-CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred HhcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 4445 78889999999874 77777777765 567888886 666666654421122211 11111 1 12
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. |+|+-... .+ ..++.+.+.|+|+|++++...
T Consensus 240 g~D~vid~~g-----~~---~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 240 LPNVTIDCSG-----NE---KCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CCSEEEECSC-----CH---HHHHHHHHHSCTTCEEEECSC
T ss_pred CCCEEEECCC-----CH---HHHHHHHHHHhcCCEEEEEec
Confidence 3 88865332 22 357888999999999998654
No 325
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.55 E-value=0.12 Score=39.08 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=42.9
Q ss_pred HHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC
Q 030025 6 TLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY 63 (184)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~ 63 (184)
..+...+++... .+...|||.=||+|.++.+..+. +-+++++|+ +...+.++++
T Consensus 239 ~~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 239 AKLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp THHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGG
T ss_pred HHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHH
Confidence 356677776654 67789999999999999887776 579999999 8887777654
No 326
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.31 E-value=0.21 Score=38.79 Aligned_cols=37 Identities=8% Similarity=0.139 Sum_probs=28.2
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhC-------CCCeEEEeechh
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKY-------PHIKGINFDLPH 55 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~-------~~~~~~~~D~~~ 55 (184)
.+..-+|+|+|+|.|.++..+++.. ...++..++.+.
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp 121 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINP 121 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCH
T ss_pred CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCH
Confidence 4445579999999999998887642 345899999843
No 327
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.16 E-value=0.26 Score=33.96 Aligned_cols=89 Identities=13% Similarity=0.135 Sum_probs=56.1
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------C-CCC-CEEE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------V-PNG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~-~~~-D~i~ 84 (184)
+++..+||..|+ |.|..+..+++.. +.+++++|. ++..+.+++.. .... .|..+ . . +.. |+++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g-~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLG-VEYV-GDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTC-CSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcC-CCEE-eeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 778899999994 5676666666654 468888887 66555554432 2221 12221 1 1 123 8777
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+. .. ..++.+.+.|+|||+++....
T Consensus 113 ~~~-----g~----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 113 NSL-----AG----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp ECC-----CT----HHHHHHHHTEEEEEEEEECSC
T ss_pred ECC-----ch----HHHHHHHHHhccCCEEEEEcC
Confidence 532 11 357888999999999998654
No 328
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.82 E-value=0.17 Score=38.80 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=59.2
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc---ccCccCCCC-CEEEech
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG---DMFQSVPNG-DAILIKW 87 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~---d~~~~~~~~-D~i~~~~ 87 (184)
.... +++..+||-+|+|. |..+..+++.. +.++++++. +.-++.+++..--.++.. |..+..... |+|+-..
T Consensus 188 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~ 265 (369)
T 1uuf_A 188 RHWQ-AGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTV 265 (369)
T ss_dssp HHTT-CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECC
T ss_pred HhcC-CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECC
Confidence 3345 78889999999874 77777788765 568888886 655555554321112211 111112223 8876533
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.- + ..++.+.+.|+|+|+++....
T Consensus 266 g~-----~---~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 266 AA-----P---HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SS-----C---CCHHHHHTTEEEEEEEEECCC
T ss_pred CC-----H---HHHHHHHHHhccCCEEEEecc
Confidence 21 1 236778899999999988653
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.79 E-value=0.45 Score=36.47 Aligned_cols=98 Identities=15% Similarity=0.202 Sum_probs=61.6
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEE---cccCc---c---C-CCC-
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVG---GDMFQ---S---V-PNG- 80 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~---~d~~~---~---~-~~~- 80 (184)
.... +++..+||-+|+|. |..+..+++.....+++++|. +.-.+.+++..--..+. .|..+ . . +..
T Consensus 176 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~ 254 (370)
T 4ej6_A 176 DLSG-IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGV 254 (370)
T ss_dssp HHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCE
T ss_pred HhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCC
Confidence 4455 78889999999874 777888888764338899987 66666655432111111 11111 1 1 113
Q ss_pred CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 81 DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 81 D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
|+|+-.. ... ..++.+.+.|+|||++++....
T Consensus 255 Dvvid~~-----G~~---~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 255 DVVIECA-----GVA---ETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp EEEEECS-----CCH---HHHHHHHHHEEEEEEEEECSCC
T ss_pred CEEEECC-----CCH---HHHHHHHHHhccCCEEEEEecc
Confidence 7776532 222 4588899999999999986543
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.74 E-value=0.47 Score=36.38 Aligned_cols=98 Identities=12% Similarity=0.161 Sum_probs=62.7
Q ss_pred HHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-----cCc---cC-CCC-C
Q 030025 14 EAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-----MFQ---SV-PNG-D 81 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-----~~~---~~-~~~-D 81 (184)
+... +++..+||-+|+| .|..+..+++.....+++++|. +.-++.+++..--..+... ..+ .. +.. |
T Consensus 187 ~~~~-~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D 265 (378)
T 3uko_A 187 NTAK-VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVD 265 (378)
T ss_dssp TTTC-CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred hhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCC
Confidence 4444 7788999999987 4777888887753338999996 7777777665222222211 111 01 113 8
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCC-cEEEEEeee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEG-GKVIVVESV 120 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~i~~~~ 120 (184)
+|+-.. ..+ ..++.+.+.|+|| |++++....
T Consensus 266 ~vid~~-----g~~---~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 266 YSFECI-----GNV---SVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp EEEECS-----CCH---HHHHHHHHTBCTTTCEEEECSCC
T ss_pred EEEECC-----CCH---HHHHHHHHHhhccCCEEEEEccc
Confidence 876532 222 4588899999997 999986643
No 331
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.56 E-value=0.45 Score=36.23 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=61.0
Q ss_pred HHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCc-eEEE-----cccCcc----C-CC
Q 030025 14 EAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGV-KHVG-----GDMFQS----V-PN 79 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i-~~~~-----~d~~~~----~-~~ 79 (184)
+... +++..+||-+|+|. |..+..+++...-.+++++|. +.-++.+++. +.+ .+.. .|+.+. . +.
T Consensus 173 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 173 QRAG-VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp HHHT-CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred HHcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCC
Confidence 4555 78889999999874 788888888763334888886 6555555543 122 2221 111111 1 22
Q ss_pred C-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 80 G-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 80 ~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. |+|+-.. ..+ ..++.+.+.|+|||++++...
T Consensus 252 g~Dvvid~~-----g~~---~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 252 EPAVALECT-----GVE---SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCSEEEECS-----CCH---HHHHHHHHHSCTTCEEEECCC
T ss_pred CCCEEEECC-----CCh---HHHHHHHHHhcCCCEEEEEcc
Confidence 3 8887632 222 358889999999999998654
No 332
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.47 E-value=0.92 Score=34.99 Aligned_cols=100 Identities=13% Similarity=0.023 Sum_probs=62.9
Q ss_pred HhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEccc----Ccc-----CCCC-CE
Q 030025 15 AYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDM----FQS-----VPNG-DA 82 (184)
Q Consensus 15 ~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~----~~~-----~~~~-D~ 82 (184)
... +++..+||-+|+|. |..+..+++.....+++++|. +.-++.+++. +++.+...- .+. -+.. |+
T Consensus 180 ~~~-~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 180 TAG-VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GFEIADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp HTT-CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCEEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred HcC-CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CCcEEccCCcchHHHHHHHHhCCCCCCE
Confidence 344 77889999999874 788888888764337899987 6666666554 233332111 110 1123 88
Q ss_pred EEechh----------hhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 83 ILIKWI----------LHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 83 i~~~~~----------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
|+-... .|+...+ ..++.+.+.|+|||++++...
T Consensus 258 vid~~G~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 258 AVDAVGFEARGHGHEGAKHEAPA---TVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEECCCTTCBCSSTTGGGSBCTT---HHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCCCcccccccccccccchH---HHHHHHHHHHhcCCEEEEecc
Confidence 865432 1221111 368899999999999988654
No 333
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.07 E-value=1.5 Score=27.89 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=48.8
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEechhhhc
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKWILHD 91 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~~l~~ 91 (184)
.++|+=+|+ |..+..+++.. .+.+++.+|. +...+..++..++.++.+|..++ ....|+|+...
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~---- 77 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT---- 77 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC----
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee----
Confidence 467888877 55555444432 2468888887 55554433223566777776541 22348887753
Q ss_pred CChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 92 WSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 92 ~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
++++....+..+.+.++++ .++.
T Consensus 78 -~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 78 -GKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp -SCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred -CCchHHHHHHHHHHHcCCC-EEEE
Confidence 2223234455566668775 4443
No 334
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.96 E-value=1.4 Score=32.09 Aligned_cols=89 Identities=13% Similarity=0.139 Sum_probs=49.3
Q ss_pred CeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCC-CCCEEEechhhhcCChHHHH
Q 030025 23 KQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVP-NGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 23 ~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~-~~D~i~~~~~l~~~~~~~~~ 98 (184)
++|.=||+|. | .++..+.+.....++++.|. +...+.+++..-......|..+... ..|+|+..- ++....
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilav-----p~~~~~ 76 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTFR 76 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS-----CHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcC-----CHHHHH
Confidence 3677788763 3 33333333321237888987 5555544332211111223333344 559988743 434445
Q ss_pred HHHHHHHhhCCCCcEEEE
Q 030025 99 KLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 99 ~~l~~~~~~L~pgG~l~i 116 (184)
.+++++...++|+..++.
T Consensus 77 ~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 77 EIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHhhCCCCcEEEE
Confidence 788889889999876554
No 335
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.96 E-value=0.39 Score=36.46 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=61.7
Q ss_pred HHHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc---ccCcc---C--CCC-C
Q 030025 13 LEAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG---DMFQS---V--PNG-D 81 (184)
Q Consensus 13 ~~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~---d~~~~---~--~~~-D 81 (184)
++... +++..+||-+|+|. |..+..+++.....+++++|. +.-++.+++..--..+.. |..+. . +.. |
T Consensus 159 l~~~~-~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 159 AELAN-IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp HHHTT-CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred HHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 35555 78889999999874 777777777653337999997 665666655421122211 11110 1 123 8
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+|+-.. ..+ ..++.+.+.|+|||+++.....
T Consensus 238 ~v~d~~-----g~~---~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 238 KVVIAG-----GDV---HTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEEECS-----SCT---THHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECC-----CCh---HHHHHHHHHHhcCCEEEEeccc
Confidence 776522 221 3588899999999999986543
No 336
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.90 E-value=1.3 Score=32.43 Aligned_cols=88 Identities=16% Similarity=0.121 Sum_probs=49.9
Q ss_pred CeEEEecCCc--ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHH
Q 030025 23 KQLVDVGGSL--GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLK 99 (184)
Q Consensus 23 ~~ilDiG~G~--G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~ 99 (184)
.+|.=||+|. +.++..+.+..+..++++.|. +...+.+.+.........|..+.....|+|++.-. +.....
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp-----~~~~~~ 81 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVP-----IKKTID 81 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSC-----HHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCC-----HHHHHH
Confidence 5788898774 244444555433568889987 55554433221111122333322334498887443 333357
Q ss_pred HHHHHHhh-CCCCcEEE
Q 030025 100 LLKNCHKS-IPEGGKVI 115 (184)
Q Consensus 100 ~l~~~~~~-L~pgG~l~ 115 (184)
+++++... ++|+..++
T Consensus 82 v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 82 FIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHTSCCCTTCEEE
T ss_pred HHHHHHhcCCCCCCEEE
Confidence 78888888 88876555
No 337
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.87 E-value=0.24 Score=37.42 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=44.0
Q ss_pred cHHhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-h---hHhhhCCCC
Q 030025 5 TTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-P---HVIQHSPEY 63 (184)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~---~~~~~a~~~ 63 (184)
...+++.++.... .+...|||.=||+|.++.+..+. +-+++++|+ + ...+.++++
T Consensus 228 p~~l~~~~i~~~~--~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~R 286 (319)
T 1eg2_A 228 PAAVIERLVRALS--HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTF 286 (319)
T ss_dssp CHHHHHHHHHHHS--CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC--CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHH
Confidence 3567777887765 67789999999999999988887 568999999 7 777766543
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.77 E-value=0.88 Score=34.79 Aligned_cols=93 Identities=18% Similarity=0.155 Sum_probs=57.9
Q ss_pred CCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-----cCcc---C-CCC-CEEEec
Q 030025 19 FEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-----MFQS---V-PNG-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-----~~~~---~-~~~-D~i~~~ 86 (184)
+.+..+||-+|+|. |..+..+++.....+++++|. +.-++.+++..--..+... +.+. . ... |+|+-.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 77889999999863 777777887763237899986 6666666544211122111 1110 0 113 887653
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCC-cEEEEEee
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEG-GKVIVVES 119 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 119 (184)
. ..+ ..++.+.+.|+|+ |++++...
T Consensus 270 ~-----g~~---~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 270 V-----GNV---GVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp S-----CCH---HHHHHHHHTBCTTTCEEEECSC
T ss_pred C-----CCH---HHHHHHHHHhhcCCcEEEEEcC
Confidence 2 222 3588899999999 99988653
No 339
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.72 E-value=0.94 Score=34.63 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=57.6
Q ss_pred CCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-----cCc---cC-CCC-CEEEec
Q 030025 19 FEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-----MFQ---SV-PNG-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-----~~~---~~-~~~-D~i~~~ 86 (184)
+.+..+||-+|+|. |..+..+++.....+++++|. +.-++.+++..--..+..+ +.+ .. ... |+|+-.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 77889999999874 777777777763237899986 6656665543211222111 111 01 113 877653
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCC-cEEEEEee
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEG-GKVIVVES 119 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 119 (184)
. ..+ ..++.+.+.|+|+ |++++...
T Consensus 269 ~-----g~~---~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 269 I-----GRL---DTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp S-----CCH---HHHHHHHHHBCTTTCEEEECSC
T ss_pred C-----CCH---HHHHHHHHHhhcCCcEEEEecc
Confidence 2 222 3588899999999 99988653
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.64 E-value=1.8 Score=32.51 Aligned_cols=99 Identities=7% Similarity=0.037 Sum_probs=61.3
Q ss_pred HHHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc------cC--CCC-C
Q 030025 13 LEAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ------SV--PNG-D 81 (184)
Q Consensus 13 ~~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~------~~--~~~-D 81 (184)
..... ..+..+||=.|+| .|..+..+++......++.+|. +.-++.+++..-...+...-.+ .. ... |
T Consensus 153 ~~~~~-~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 153 FHLAQ-GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp HHHTT-CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred HHHhc-cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 34444 7788999999987 4566677777765556788887 6666777665322322221111 01 122 6
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+|+-.. ..+ ..++...++++|||++++....
T Consensus 232 ~v~d~~-----G~~---~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 232 LILETA-----GVP---QTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp EEEECS-----CSH---HHHHHHHHHCCTTCEEEECCCC
T ss_pred cccccc-----ccc---chhhhhhheecCCeEEEEEecc
Confidence 654422 222 4588889999999999986543
No 341
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.47 E-value=0.77 Score=35.08 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=59.5
Q ss_pred HHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-----cCc---cC-CCC-C
Q 030025 14 EAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-----MFQ---SV-PNG-D 81 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-----~~~---~~-~~~-D 81 (184)
+... +.+..+||-+|+| .|..+..+++.....+++++|. +.-++.+++..--..+..+ +.+ .. +.. |
T Consensus 185 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~D 263 (373)
T 1p0f_A 185 NTAK-VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVD 263 (373)
T ss_dssp TTTC-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred hccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCC
Confidence 3344 7788999999987 3777777777653237889986 6666666544211222111 111 01 113 8
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCC-cEEEEEee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEG-GKVIVVES 119 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 119 (184)
+|+-.. ..+ ..++.+.+.|+|+ |++++...
T Consensus 264 vvid~~-----g~~---~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 264 YAVECA-----GRI---ETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp EEEECS-----CCH---HHHHHHHHTBCTTTCEEEECCC
T ss_pred EEEECC-----CCH---HHHHHHHHHHhcCCCEEEEEcc
Confidence 886532 222 3588899999999 99988653
No 342
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.47 E-value=0.37 Score=36.43 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=61.5
Q ss_pred CCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc--cCcc---C--CCC-CEEEechh
Q 030025 19 FEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD--MFQS---V--PNG-DAILIKWI 88 (184)
Q Consensus 19 ~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d--~~~~---~--~~~-D~i~~~~~ 88 (184)
..+..+||-+|+|. |..+..+++.....+++++|. +.-++.+++..--..+..+ ..+. . +.. |+|+-..
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~- 247 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV- 247 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESS-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECC-
Confidence 67889999999874 788888888765679999987 6666666655221222111 1111 1 113 7766522
Q ss_pred hhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 89 LHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 89 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
..+ ..++.+.+.|+|+|++++....
T Consensus 248 ----G~~---~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 248 ----GAQ---STIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp ----CCH---HHHHHHHHHEEEEEEEEECSCC
T ss_pred ----CCH---HHHHHHHHHHhcCCEEEEECCC
Confidence 222 3688999999999999986543
No 343
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=91.43 E-value=0.33 Score=36.74 Aligned_cols=123 Identities=9% Similarity=0.024 Sum_probs=75.2
Q ss_pred CCCeEEEecCCcChHHHHHHhhCC-CCeE-EEeec-hhHhhhCCCC-CCceEEEcccCc-c---CC--CCCEEEechhhh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYP-HIKG-INFDL-PHVIQHSPEY-PGVKHVGGDMFQ-S---VP--NGDAILIKWILH 90 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~-~~~~-~~~D~-~~~~~~a~~~-~~i~~~~~d~~~-~---~~--~~D~i~~~~~l~ 90 (184)
+..+++|+-||.|.++..+.+..- .-.+ .++|+ +.+.+..+.+ +.. +..+|+.+ . ++ ..|+++......
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 456899999999999998887632 2244 68998 6666544433 333 56677775 2 23 239998765544
Q ss_pred cC---------C-hHHHHHHHHHHHh-h---C--CCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHH
Q 030025 91 DW---------S-DEHCLKLLKNCHK-S---I--PEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKH 154 (184)
Q Consensus 91 ~~---------~-~~~~~~~l~~~~~-~---L--~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (184)
.+ . +++...++.++.+ + + +|. +++.|....- .. + .+.+
T Consensus 88 ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~--~~~lENV~gl-------------~~---------~--~~~~ 141 (327)
T 3qv2_A 88 PYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK--HIFIENVPLF-------------KE---------S--LVFK 141 (327)
T ss_dssp TCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS--EEEEEECGGG-------------GG---------S--HHHH
T ss_pred CcccccCCCCCCCccccchhHHHHHHHHHHHhccCCC--EEEEEchhhh-------------cC---------h--HHHH
Confidence 44 1 1222345666666 4 4 454 6666644311 00 0 1357
Q ss_pred HHHHHHHHcCCceeEE
Q 030025 155 EFTTLATEAGFSGIRF 170 (184)
Q Consensus 155 ~~~~~l~~aGf~~i~~ 170 (184)
.+.+.|++.||.....
T Consensus 142 ~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 142 EIYNILIKNQYYIKDI 157 (327)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCCEEEEE
Confidence 7888899999986543
No 344
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.42 E-value=0.47 Score=36.26 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=57.1
Q ss_pred CCCeEEEec-CC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEE-c--ccCc---cCC-CC-CEEEechhh
Q 030025 21 HIKQLVDVG-GS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVG-G--DMFQ---SVP-NG-DAILIKWIL 89 (184)
Q Consensus 21 ~~~~ilDiG-~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~-~--d~~~---~~~-~~-D~i~~~~~l 89 (184)
+..+||=+| +| .|..+..+++.....++++++. +.-++.+++.. ...+. . |..+ ... .. |+|+-..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lG-ad~vi~~~~~~~~~v~~~~~~g~Dvvid~~-- 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLG-AHHVIDHSKPLAAEVAALGLGAPAFVFSTT-- 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTT-CSEEECTTSCHHHHHHTTCSCCEEEEEECS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcC-CCEEEeCCCCHHHHHHHhcCCCceEEEECC--
Confidence 667899998 44 6888888888745679999998 66666665542 22111 1 1111 111 23 7776522
Q ss_pred hcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 90 HDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
..+ ..++.+.+.|+|+|++++..
T Consensus 248 ---g~~---~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 248 ---HTD---KHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ---CHH---HHHHHHHHHSCTTCEEEECS
T ss_pred ---Cch---hhHHHHHHHhcCCCEEEEEC
Confidence 222 46888999999999999863
No 345
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.88 E-value=1 Score=34.44 Aligned_cols=93 Identities=14% Similarity=0.057 Sum_probs=58.0
Q ss_pred CCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-----cCccC----CCC-CEEEec
Q 030025 19 FEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-----MFQSV----PNG-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-----~~~~~----~~~-D~i~~~ 86 (184)
+.+..+||-+|+| .|..+..+++.....+++++|. +.-++.+++..--..+..+ +.+.. +.. |+|+-.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 7788999999987 4777778887763337899986 6656665544211122111 11100 113 887653
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCC-cEEEEEee
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEG-GKVIVVES 119 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 119 (184)
. ..+ ..++.+.+.|+|+ |++++...
T Consensus 273 ~-----G~~---~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 273 A-----GTA---QTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp S-----CCH---HHHHHHHHTBCTTTCEEEECCC
T ss_pred C-----CCH---HHHHHHHHHhhcCCCEEEEECC
Confidence 2 222 3588899999999 99988654
No 346
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.80 E-value=0.91 Score=34.08 Aligned_cols=96 Identities=10% Similarity=0.107 Sum_probs=60.9
Q ss_pred HHhcCCCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhC-CCCCCceEEEcccCc---c----CCCC-C
Q 030025 14 EAYKGFEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHS-PEYPGVKHVGGDMFQ---S----VPNG-D 81 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a-~~~~~i~~~~~d~~~---~----~~~~-D 81 (184)
+... +++..+||-.|+ |.|..+..+++.. ++++++++. +.-++.+ ++..--..+...-.+ . .+.. |
T Consensus 143 ~~~~-~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 143 DVGQ-PKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp HTTC-CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred HhcC-CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 4445 888999999998 5778888888775 569999986 6666655 444221112111111 0 1223 7
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+++-+. .. ..++.+.+.|+|+|++++....
T Consensus 221 ~vi~~~-----g~----~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 221 VFFDNV-----GG----EILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp EEEESS-----CH----HHHHHHHTTEEEEEEEEECCCG
T ss_pred EEEECC-----Cc----chHHHHHHHHhhCCEEEEEeec
Confidence 776532 21 2588899999999999986543
No 347
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.79 E-value=1.2 Score=33.51 Aligned_cols=97 Identities=11% Similarity=0.079 Sum_probs=59.7
Q ss_pred HHHhcCCCCCCeEEEecCCcC-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEE---EcccCc---cCCC--C-C
Q 030025 13 LEAYKGFEHIKQLVDVGGSLG-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHV---GGDMFQ---SVPN--G-D 81 (184)
Q Consensus 13 ~~~~~~~~~~~~ilDiG~G~G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~---~~d~~~---~~~~--~-D 81 (184)
++... ..+..+||=+|+|.+ ..+..+++.....+++++|. ++-++.+++..--..+ ..|..+ .... . |
T Consensus 156 l~~~~-~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 156 IKVSG-VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp HHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred ecccC-CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 34445 778899999999854 55666666666789999997 6656666554222222 222221 1111 2 4
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.++.... .. ..+....+.|+|+|++++..
T Consensus 235 ~~~~~~~-----~~---~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAV-----AR---IAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCS-----CH---HHHHHHHHTEEEEEEEEECC
T ss_pred EEEEecc-----Cc---chhheeheeecCCceEEEEe
Confidence 4443222 12 45888899999999998864
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.67 E-value=1.3 Score=34.67 Aligned_cols=89 Identities=16% Similarity=0.100 Sum_probs=56.0
Q ss_pred CCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEechhhh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKWILH 90 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~~l~ 90 (184)
...+|+=+|+| .++..+++.. .+..++++|. ++.++.+++ .++.++.+|..++ ...+|+|++..
T Consensus 3 ~~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~--- 76 (413)
T 3l9w_A 3 HGMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI--- 76 (413)
T ss_dssp -CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECC---
T ss_pred CCCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECC---
Confidence 34678888875 3444444332 3578999998 777776653 4677888999872 22348776633
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
++++....+-...+.+.|+..++.-
T Consensus 77 --~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 77 --DDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp --SSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred --CChHHHHHHHHHHHHhCCCCeEEEE
Confidence 3334345556667777888777763
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.50 E-value=1.3 Score=33.22 Aligned_cols=91 Identities=10% Similarity=0.062 Sum_probs=58.6
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---c---C--CCC-CEEEec
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---S---V--PNG-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~---~--~~~-D~i~~~ 86 (184)
+++..+||-+|+ |.|..+..+++.. ++++++++. +.-++.+++...-..+..+-.+ . . +.. |+++-+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 778899999993 5677888788775 569999997 6666666554322222211111 0 1 223 877653
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
..- ..++.+.+.|+|||++++...
T Consensus 225 ~g~---------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 225 VGK---------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp CGG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCh---------HHHHHHHHHhccCCEEEEEcC
Confidence 321 247788899999999998654
No 350
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.39 E-value=1.1 Score=31.33 Aligned_cols=86 Identities=10% Similarity=0.092 Sum_probs=53.2
Q ss_pred eEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEechhhhcCC
Q 030025 24 QLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKWILHDWS 93 (184)
Q Consensus 24 ~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~~l~~~~ 93 (184)
+|+=+|+ |.++..+++.. .+..++.+|. ++.++...+..++.++.+|..++ ...+|++++.. +
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-----~ 74 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT-----P 74 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC-----S
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec-----C
Confidence 4666665 66666666542 3568899997 66555433334688899998862 23348887632 3
Q ss_pred hHHHHHHHHHHHhhCCCCcEEEE
Q 030025 94 DEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 94 ~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
+++...++....+.+.|..+++.
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCeEEE
Confidence 33334556666666667777665
No 351
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=90.31 E-value=2.1 Score=32.92 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=59.3
Q ss_pred HHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCC-C------CC--CceEEEcccCccCCCC-C
Q 030025 12 ILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSP-E------YP--GVKHVGGDMFQSVPNG-D 81 (184)
Q Consensus 12 l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~-~------~~--~i~~~~~d~~~~~~~~-D 81 (184)
+++++.+....++||.++.+.|.++..++...+ ..+ -|. -+-+++- . .+ ++.+. +..+..+.. |
T Consensus 29 ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~~--~~~-~ds-~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~~~~ 102 (375)
T 4dcm_A 29 LLQQLDDTEIRGPVLILNDAFGALSCALAEHKP--YSI-GDS-YISELATRENLRLNGIDESSVKFL--DSTADYPQQPG 102 (375)
T ss_dssp HHHTTTTCCCCSCEEEECCSSSHHHHHTGGGCC--EEE-ESC-HHHHHHHHHHHHHTTCCGGGSEEE--ETTSCCCSSCS
T ss_pred HHHhhhhccCCCCEEEECCCCCHHHHhhccCCc--eEE-EhH-HHHHHHHHHHHHHcCCCccceEec--ccccccccCCC
Confidence 455554344557899999999999998876522 222 342 2111111 1 11 24443 333333333 8
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+++....= ...+....|..+...|+||+.+++...
T Consensus 103 ~v~~~lpk---~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 103 VVLIKVPK---TLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp EEEEECCS---CHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred EEEEEcCC---CHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 88774431 234556789999999999999987654
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.22 E-value=0.5 Score=35.75 Aligned_cols=94 Identities=11% Similarity=0.093 Sum_probs=59.3
Q ss_pred HHhcCCCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc--c----C----CCC
Q 030025 14 EAYKGFEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ--S----V----PNG 80 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~--~----~----~~~ 80 (184)
.... +.+..+||-+|+ |.|..+..+++.. +.++++++. +...+.+++.. .... .|..+ . + ...
T Consensus 163 ~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g-~~~~-~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 163 KSAN-LMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIG-GEVF-IDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp HTTT-CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTT-CCEE-EETTTCSCHHHHHHHHHTSC
T ss_pred HhcC-CCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcC-CceE-EecCccHhHHHHHHHHhCCC
Confidence 3444 778899999998 4777777777765 468888886 55555554432 2222 13321 1 1 113
Q ss_pred -CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 81 -DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 81 -D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
|+++.... .. ..++.+.+.|+|+|++++...
T Consensus 239 ~D~vi~~~g-----~~---~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 239 AHGVINVSV-----SE---AAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEEECSS-----CH---HHHHHHTTSEEEEEEEEECCC
T ss_pred CCEEEECCC-----cH---HHHHHHHHHHhcCCEEEEEeC
Confidence 77765432 11 468889999999999988653
No 353
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.21 E-value=0.89 Score=34.71 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-----cCc---cC-CCC-CEEEec
Q 030025 19 FEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-----MFQ---SV-PNG-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-----~~~---~~-~~~-D~i~~~ 86 (184)
+++..+||-+|+|. |..+..+++.....+++++|. +.-++.+++..--..+... ..+ .. +.. |+|+-.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC
Confidence 77889999999763 677777777653237889986 5555555543211122111 111 01 113 887653
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCC-cEEEEEee
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEG-GKVIVVES 119 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 119 (184)
.. .+ ..++.+.+.|+|+ |++++...
T Consensus 268 ~g-----~~---~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 268 IG-----NV---KVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp SC-----CH---HHHHHHHHTBCTTTCEEEECSC
T ss_pred CC-----cH---HHHHHHHHhhccCCcEEEEEec
Confidence 22 22 3588899999999 99998653
No 354
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.18 E-value=1.2 Score=33.46 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=57.9
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCC-CCCCceEEEcccCc--cC--------CCC-CEE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSP-EYPGVKHVGGDMFQ--SV--------PNG-DAI 83 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-~~~~i~~~~~d~~~--~~--------~~~-D~i 83 (184)
+.+..+||-.|+ |.|..+..+++.. ++++++++. +.-++.++ +. +..... |..+ .+ +.. |++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~-g~~~~~-d~~~~~~~~~~~~~~~~~~~d~v 229 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF-GFDDAF-NYKEESDLTAALKRCFPNGIDIY 229 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS-CCSEEE-ETTSCSCSHHHHHHHCTTCEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-CCceEE-ecCCHHHHHHHHHHHhCCCCcEE
Confidence 778899999997 5778887777765 468999987 56666555 33 222211 2211 11 223 777
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+-+.. . ..++.+.+.|+|||++++...
T Consensus 230 i~~~g-----~----~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 230 FENVG-----G----KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EESSC-----H----HHHHHHHTTEEEEEEEEECCC
T ss_pred EECCC-----H----HHHHHHHHHHhcCCEEEEEcc
Confidence 65332 2 258888999999999998654
No 355
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.13 E-value=0.47 Score=35.64 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=56.6
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc--c--------CCCC-CEEE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ--S--------VPNG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~--~--------~~~~-D~i~ 84 (184)
+.+..+||-.|+ |.|..+..+++.. +++++++|. +..++.+++. +.... .|..+ . .... |+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~-g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi 219 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI-GFDAA-FNYKTVNSLEEALKKASPDGYDCYF 219 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCSEE-EETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CCcEE-EecCCHHHHHHHHHHHhCCCCeEEE
Confidence 778899999997 5677777777765 568999987 5555555333 22211 12221 0 1123 7776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+.. . ..++.+.+.|+|||++++...
T Consensus 220 ~~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 220 DNVG-----G----EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp ESSC-----H----HHHHHHHTTEEEEEEEEECCC
T ss_pred ECCC-----h----HHHHHHHHHHhcCCEEEEEec
Confidence 5332 2 247888899999999988654
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.13 E-value=0.47 Score=35.89 Aligned_cols=92 Identities=13% Similarity=0.023 Sum_probs=57.7
Q ss_pred CCCCCeEEEecCCc-ChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCCCCceEEE----cccCccC--CCC-CEEEechh
Q 030025 19 FEHIKQLVDVGGSL-GNTLKAITSKY-PHIKGINFDL-PHVIQHSPEYPGVKHVG----GDMFQSV--PNG-DAILIKWI 88 (184)
Q Consensus 19 ~~~~~~ilDiG~G~-G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~i~~~~----~d~~~~~--~~~-D~i~~~~~ 88 (184)
+ +..+||-+|+|. |..+..+++.. |+.++++++. +.-++.+++..--.++. .|..... +.. |+|+-...
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g 247 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVG 247 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCC
Confidence 6 789999999863 67777777764 4678999986 55556555432111221 1111111 223 87765332
Q ss_pred hhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 89 LHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 89 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+ ..++.+.+.|+|+|++++...
T Consensus 248 -----~~---~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 248 -----TE---ETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp -----CH---HHHHHHHHHEEEEEEEEECCC
T ss_pred -----Ch---HHHHHHHHHhhcCCEEEEeCC
Confidence 22 358888999999999988654
No 357
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.59 E-value=0.6 Score=35.31 Aligned_cols=97 Identities=21% Similarity=0.243 Sum_probs=58.9
Q ss_pred HHhcCCCCCCeEEEecCC--cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc------c-CC-CC-C
Q 030025 14 EAYKGFEHIKQLVDVGGS--LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ------S-VP-NG-D 81 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G--~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~------~-~~-~~-D 81 (184)
.... +.+..+||-.|+| .|..+..+++.....+++++|. +..++.+++...-..+...-.+ . .. .. |
T Consensus 164 ~~~~-~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 242 (347)
T 1jvb_A 164 RKAS-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVD 242 (347)
T ss_dssp HHTT-CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred HhcC-CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCce
Confidence 3445 7788999999987 6666767776643568999986 6555555433211111111011 1 11 23 7
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+++-... .+ ..++.+.+.|+|+|++++...
T Consensus 243 ~vi~~~g-----~~---~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 243 AVIDLNN-----SE---KTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEESCC-----CH---HHHTTGGGGEEEEEEEEECCS
T ss_pred EEEECCC-----CH---HHHHHHHHHHhcCCEEEEECC
Confidence 7765322 22 358888999999999988553
No 358
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=89.49 E-value=0.52 Score=35.65 Aligned_cols=122 Identities=15% Similarity=0.062 Sum_probs=71.2
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-CCceEEEcccCc----cCCCCCEEEechhhhcCC--
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-PGVKHVGGDMFQ----SVPNGDAILIKWILHDWS-- 93 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~i~~~~~d~~~----~~~~~D~i~~~~~l~~~~-- 93 (184)
..+++|+-||.|.++..+.+.. --.+.++|. +.+++..+.+ +... .+|+.+ ..+..|+|+.......++
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSIS 87 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTT
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchh
Confidence 4689999999999999988873 224667887 6665544433 3332 577765 123349988865544442
Q ss_pred ------hHHHHHHHH---HHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcC
Q 030025 94 ------DEHCLKLLK---NCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAG 164 (184)
Q Consensus 94 ------~~~~~~~l~---~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 164 (184)
+++...++. ++.+.++|. +++.|....-. . .....+.+.+.+.|++.|
T Consensus 88 g~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~-------------~--------~~~~~~~~~i~~~l~~~G 144 (327)
T 2c7p_A 88 GKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFA-------------S--------HDNGNTLEVVKNTMNELD 144 (327)
T ss_dssp SCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGG-------------T--------GGGGHHHHHHHHHHHHTT
T ss_pred cccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHH-------------h--------ccccHHHHHHHHHHHhCC
Confidence 111112222 333446886 66666543110 0 001124577888899999
Q ss_pred CceeE
Q 030025 165 FSGIR 169 (184)
Q Consensus 165 f~~i~ 169 (184)
+....
T Consensus 145 Y~v~~ 149 (327)
T 2c7p_A 145 YSFHA 149 (327)
T ss_dssp BCCEE
T ss_pred CEEEE
Confidence 87543
No 359
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.49 E-value=0.31 Score=37.23 Aligned_cols=95 Identities=13% Similarity=-0.010 Sum_probs=60.2
Q ss_pred HhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---c----CCC-C-CEE
Q 030025 15 AYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---S----VPN-G-DAI 83 (184)
Q Consensus 15 ~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~----~~~-~-D~i 83 (184)
... +++..+||-+|+|. |..+..+++.. ++++++++. +.-++.+++..--..+..+..+ . .+. . |+|
T Consensus 184 ~~~-~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 184 KGH-LRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp TTC-CCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred hcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 344 77889999999774 77777777765 569999997 6666666544222222211111 0 112 3 877
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+-... . ..++.+.+.|+|+|++++....
T Consensus 262 id~~g-~--------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 262 LEIAG-G--------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEETT-S--------SCHHHHHHHEEEEEEEEEECCC
T ss_pred EECCC-h--------HHHHHHHHHhhcCCEEEEEecC
Confidence 65432 1 2377788899999999987643
No 360
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=89.44 E-value=3.8 Score=30.56 Aligned_cols=121 Identities=16% Similarity=0.107 Sum_probs=72.0
Q ss_pred CeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc----cCCCCCEEEechhhhcC-----
Q 030025 23 KQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ----SVPNGDAILIKWILHDW----- 92 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~----~~~~~D~i~~~~~l~~~----- 92 (184)
.+|+|+=||.|.++.-+-+..- -.+.++|+ +.+.+.-+.+-.-.++.+|+.+ .++..|+++......-+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTE
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCC
Confidence 4799999999999988877632 23457777 6555544333234677888876 23444998775544333
Q ss_pred ----ChHHHHHHHHH---HHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHHHcCC
Q 030025 93 ----SDEHCLKLLKN---CHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLATEAGF 165 (184)
Q Consensus 93 ----~~~~~~~~l~~---~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 165 (184)
.++ ...++.+ +.+.++|. +++.|....- .. .........+.+.|++.||
T Consensus 80 ~~g~~d~-R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl-------------~~--------~~~~~~~~~i~~~l~~~GY 135 (331)
T 3ubt_Y 80 LRGIDDP-RGKLFYEYIRILKQKKPI--FFLAENVKGM-------------MA--------QRHNKAVQEFIQEFDNAGY 135 (331)
T ss_dssp ECCTTCG-GGHHHHHHHHHHHHHCCS--EEEEEECCGG-------------GG--------CTTSHHHHHHHHHHHHHTE
T ss_pred ccCCCCc-hhHHHHHHHHHHhccCCe--EEEeeeeccc-------------cc--------ccccchhhhhhhhhccCCc
Confidence 222 2234444 44446886 6666654211 00 0111245777888999998
Q ss_pred cee
Q 030025 166 SGI 168 (184)
Q Consensus 166 ~~i 168 (184)
.+.
T Consensus 136 ~v~ 138 (331)
T 3ubt_Y 136 DVH 138 (331)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 361
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.39 E-value=2.3 Score=31.95 Aligned_cols=91 Identities=13% Similarity=0.152 Sum_probs=59.0
Q ss_pred HhcCCCCCCeEEEecCC-cChHHHHHHhhCCCC-eEEEeec-hhHhhhCCCCCCceEEEcccCc-c----C----CCC-C
Q 030025 15 AYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHI-KGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S----V----PNG-D 81 (184)
Q Consensus 15 ~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~----~----~~~-D 81 (184)
... + +..+||-+|+| .|..+..+++.. +. ++++++. +.-++.+++. ...+ .|..+ . . +.. |
T Consensus 160 ~~~-~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l--a~~v-~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 160 GSG-V-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY--ADRL-VNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTC-C-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT--CSEE-ECTTTSCHHHHHHHHHSSCEE
T ss_pred hCC-C-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--HHhc-cCcCccCHHHHHHHhcCCCCC
Confidence 444 6 78899999975 467777777765 45 8999987 6667777665 3222 12211 1 1 223 7
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+|+-... .+ ..++.+.+.|+|+|+++....
T Consensus 234 ~vid~~g-----~~---~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 234 VLLEFSG-----NE---AAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEECSC-----CH---HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----CH---HHHHHHHHHHhcCCEEEEEec
Confidence 7765322 22 357888999999999988653
No 362
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.18 E-value=2.9 Score=30.21 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=56.3
Q ss_pred CeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cCCCCCEEEechhhhcCChHHHH
Q 030025 23 KQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
++||=.|+ |.++..+++.. .+.++++++. +.-..... ..+++++.+|+.+ .....|+|+.........++...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~~ 82 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLA 82 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHHH
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEecccccccCCCCEEEECCCccccccHHHH
Confidence 68999994 88887777663 3468888876 33221111 1578999999887 42223888776655443344444
Q ss_pred HHHHHHHhhCCCCcEEEEEee
Q 030025 99 KLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 99 ~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+++.+.+.-..-++++....
T Consensus 83 ~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 83 ALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHHhhcCCceEEEEeec
Confidence 556555553123356666554
No 363
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.75 E-value=0.16 Score=38.73 Aligned_cols=97 Identities=11% Similarity=0.050 Sum_probs=57.8
Q ss_pred HhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc----ccCccCCCC-CEEEech
Q 030025 15 AYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG----DMFQSVPNG-DAILIKW 87 (184)
Q Consensus 15 ~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~----d~~~~~~~~-D~i~~~~ 87 (184)
... +++..+||-+|+| .|..+..+++.. +.++++++. +.-++.+++..--..+.. |..+..... |+|+-..
T Consensus 174 ~~~-~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~ 251 (360)
T 1piw_A 174 RNG-CGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCA 251 (360)
T ss_dssp HTT-CSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred HcC-CCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECC
Confidence 345 7888999999986 477777777765 568889986 555555544321122221 111112223 8886543
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.-. + + ..++.+.+.|+|||+++....
T Consensus 252 g~~--~-~---~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 252 SSL--T-D---IDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp SCS--T-T---CCTTTGGGGEEEEEEEEECCC
T ss_pred CCC--c-H---HHHHHHHHHhcCCCEEEEecC
Confidence 220 0 1 236667889999999987543
No 364
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.71 E-value=0.66 Score=35.64 Aligned_cols=93 Identities=19% Similarity=0.083 Sum_probs=58.1
Q ss_pred CCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc------cCc---cC-C-CC-CEEE
Q 030025 19 FEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD------MFQ---SV-P-NG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d------~~~---~~-~-~~-D~i~ 84 (184)
+.+..+||-+|+| .|..+..+++.....++++++. +.-++.+++..--.++..+ +.+ .. + .. |+|+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 5667899999966 5777778887763258999996 6666666544211222221 111 11 1 23 8776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
-... .+ ..++.+.+.|+|+|++++...
T Consensus 273 d~~g-----~~---~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 273 EATG-----DS---RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp ECSS-----CT---THHHHHHHHEEEEEEEEECCC
T ss_pred ECCC-----CH---HHHHHHHHHHhcCCEEEEEec
Confidence 5322 11 347888899999999988654
No 365
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=88.60 E-value=1.5 Score=32.99 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=59.5
Q ss_pred HHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-cC-------CCC-CE
Q 030025 14 EAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-SV-------PNG-DA 82 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~~-------~~~-D~ 82 (184)
.... +.+..+||-+|+| .|..+..+++.. +.++++++. +.-++.+++. +.... .|..+ .+ ... |+
T Consensus 158 ~~~~-~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~~~-~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 158 KVTG-AKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL-GADLV-VNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp HHHT-CCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TCSEE-ECTTTSCHHHHHHHHHSSEEE
T ss_pred HhcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC-CCCEE-ecCCCccHHHHHHHHhCCCCE
Confidence 3445 7888999999985 577777777765 569999996 6555555443 22221 12221 11 023 77
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++-... .+ ..++.+.+.|+|+|++++...
T Consensus 234 vid~~g-----~~---~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 234 AVVTAV-----SK---PAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EEESSC-----CH---HHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCC-----CH---HHHHHHHHHhhcCCEEEEecc
Confidence 765322 22 357888999999999988543
No 366
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.44 E-value=3.5 Score=26.40 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=40.1
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEech
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKW 87 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~ 87 (184)
.++|+=+|+| .++..+++.. .+.+++++|. ++.++.+++ .++.++.+|..++ ....|+|++..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 4578999885 4555555442 2568899998 666555443 3578888998762 12338877643
No 367
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.09 E-value=1.9 Score=32.74 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=59.3
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc---cCcc----CCCC-CEEEech
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD---MFQS----VPNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d---~~~~----~~~~-D~i~~~~ 87 (184)
+++..+||-.| +|.|..+..+++.. ++++++++. ++-++.+++..--..+..+ +.+. .+.. |+++-..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECC
Confidence 77889999999 56788888888876 568999987 5555555543211122111 1110 1223 8776543
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
. . ..++.+.+.|+|+|++++....
T Consensus 240 g-----~----~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 240 G-----G----AMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp C-----T----HHHHHHHHHEEEEEEEEECCCG
T ss_pred C-----H----HHHHHHHHHHhcCCEEEEEeCC
Confidence 2 1 3578889999999999886543
No 368
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.07 E-value=5.3 Score=28.09 Aligned_cols=87 Identities=13% Similarity=0.080 Sum_probs=55.0
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCC--CCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEechhh
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYP--HIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKWIL 89 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~--~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~~l 89 (184)
....+|+=+|+ |..+..+++... +. ++++|. +..++.++ .++.++.+|..++ ...+|.+++..
T Consensus 7 ~~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-- 79 (234)
T 2aef_A 7 AKSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDL-- 79 (234)
T ss_dssp ---CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECC--
T ss_pred CCCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC--
Confidence 34578888887 677777777753 24 788887 66555554 5689999998862 22348887642
Q ss_pred hcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 90 HDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
++++.-.......+.+.|+.+++.
T Consensus 80 ---~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 80 ---ESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp ---SCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred ---CCcHHHHHHHHHHHHHCCCCeEEE
Confidence 333333445556666788767665
No 369
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.05 E-value=0.69 Score=34.87 Aligned_cols=96 Identities=9% Similarity=0.090 Sum_probs=57.5
Q ss_pred HHhcCCCCCCeEEEecCC--cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---c----C-CCC-C
Q 030025 14 EAYKGFEHIKQLVDVGGS--LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---S----V-PNG-D 81 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G--~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~----~-~~~-D 81 (184)
+... +++..+||-+|+| .|..+..+++.. ++++++++. +.-++.+++..--..+...-.+ . . +.. |
T Consensus 138 ~~~~-~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 138 ETLN-LQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TTSC-CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred Hhcc-cCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCc
Confidence 4444 7888999999986 678888888765 568999986 5555555443211122111111 0 1 123 7
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+++-+. ..+. +....+.|+|+|++++....
T Consensus 216 vvid~~-----g~~~----~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 216 AAIDSI-----GGPD----GNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp EEEESS-----CHHH----HHHHHHTEEEEEEEEECCCT
T ss_pred EEEECC-----CChh----HHHHHHHhcCCCEEEEEeec
Confidence 776532 2222 23445899999999986543
No 370
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=86.52 E-value=0.51 Score=35.04 Aligned_cols=53 Identities=13% Similarity=0.226 Sum_probs=33.0
Q ss_pred CceEEEcccCc---cCCC-C-CEEEechhhhcCC--------------h----HHHHHHHHHHHhhCCCCcEEEEE
Q 030025 65 GVKHVGGDMFQ---SVPN-G-DAILIKWILHDWS--------------D----EHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 65 ~i~~~~~d~~~---~~~~-~-D~i~~~~~l~~~~--------------~----~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
++.++++|..+ .++. . |+|++.-...... . .....+++++.++|+|||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 45677777765 2332 2 7777754432110 0 11235788999999999999884
No 371
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.13 E-value=4.5 Score=29.77 Aligned_cols=96 Identities=13% Similarity=-0.009 Sum_probs=51.3
Q ss_pred HHHHHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc-cCccCCCCCEEEech
Q 030025 11 KILEAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD-MFQSVPNGDAILIKW 87 (184)
Q Consensus 11 ~l~~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d-~~~~~~~~D~i~~~~ 87 (184)
.++.....--+.++|+=||+| .|......+..+ +.++++.|. +.-.+.+.+ .++.....+ ..+.....|+|+...
T Consensus 144 ~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~-~g~~~~~~~~l~~~l~~aDvVi~~~ 221 (293)
T 3d4o_A 144 MAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAE-MGMEPFHISKAAQELRDVDVCINTI 221 (293)
T ss_dssp HHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TTSEEEEGGGHHHHTTTCSEEEECC
T ss_pred HHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-CCCeecChhhHHHHhcCCCEEEECC
Confidence 344444311256899999876 333333333444 468999997 443332222 234433222 212344559998877
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
..+.+.. +..+.+|||+.++-
T Consensus 222 p~~~i~~--------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 222 PALVVTA--------NVLAEMPSHTFVID 242 (293)
T ss_dssp SSCCBCH--------HHHHHSCTTCEEEE
T ss_pred ChHHhCH--------HHHHhcCCCCEEEE
Confidence 6654432 13346889887654
No 372
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=86.12 E-value=1.4 Score=33.49 Aligned_cols=88 Identities=19% Similarity=0.173 Sum_probs=56.0
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------CC-CC-CEEE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------VP-NG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~~-~~-D~i~ 84 (184)
+++..+||-.|+ |.|..+..+++.. ++++++++. ++-++.+++.. .... .|..+ . .. .. |+++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g-a~~~-~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNG-AHEV-FNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT-CSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcC-CCEE-EeCCCchHHHHHHHHcCCCCcEEEE
Confidence 778899999996 5677777777765 568999986 55555554432 2211 12211 1 11 13 7776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
-+.. . ..+....+.|+|+|++++..
T Consensus 245 ~~~G-----~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 245 EMLA-----N----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp ESCH-----H----HHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-----h----HHHHHHHHhccCCCEEEEEe
Confidence 5432 1 24677889999999999865
No 373
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=85.75 E-value=1.1 Score=34.70 Aligned_cols=104 Identities=8% Similarity=0.090 Sum_probs=59.9
Q ss_pred HhHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCCCCeEEEe-ec-hhHhhhCCCCCCceEEEcccCccCCCC-CEE
Q 030025 7 LVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINF-DL-PHVIQHSPEYPGVKHVGGDMFQSVPNG-DAI 83 (184)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~-D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~-D~i 83 (184)
...+.+++++. +...+||.++-+.|.++..+... .+++.+ |. +......+ +++.....+-.+..+.. |+|
T Consensus 33 ~~~~~l~~~~~--~~~~~~l~~n~~~g~~~~~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~d~v 105 (381)
T 3dmg_A 33 PVHDLLQKTVE--PFGERALDLNPGVGWGSLPLEGR---MAVERLETSRAAFRCLTA--SGLQARLALPWEAAAGAYDLV 105 (381)
T ss_dssp HHHHHHHTTCC--CCSSEEEESSCTTSTTTGGGBTT---BEEEEEECBHHHHHHHHH--TTCCCEECCGGGSCTTCEEEE
T ss_pred hHHHHHHHHHH--HhCCcEEEecCCCCccccccCCC---CceEEEeCcHHHHHHHHH--cCCCccccCCccCCcCCCCEE
Confidence 44556667765 34479999999999988666432 344444 33 33222221 22222212222233344 888
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
++...=+ -........|.++.+.|+|||.+++..
T Consensus 106 ~~~~Pk~-k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 106 VLALPAG-RGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp EEECCGG-GCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCcc-hhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 7743311 011245678999999999999998764
No 374
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.54 E-value=5.9 Score=28.65 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=46.6
Q ss_pred eEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCce-EEEcccCccCCCCCEEEechhhhcCChHHHHH
Q 030025 24 QLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVK-HVGGDMFQSVPNGDAILIKWILHDWSDEHCLK 99 (184)
Q Consensus 24 ~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~-~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~ 99 (184)
+|.=||||. | .++..+.+. +.+++++|. ++..+.+++. ++. ....|..+. ...|+|++.-. +.....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~D~vi~av~-----~~~~~~ 72 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVER-QLVDEAGQDLSLL-QTAKIIFLCTP-----IQLILP 72 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-TSCSEEESCGGGG-TTCSEEEECSC-----HHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhC-CCCccccCCHHHh-CCCCEEEEECC-----HHHHHH
Confidence 567788763 2 233333332 347888887 5555444322 221 112232223 34499887443 334457
Q ss_pred HHHHHHhhCCCCcEEEE
Q 030025 100 LLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 100 ~l~~~~~~L~pgG~l~i 116 (184)
+++++...++|+..++-
T Consensus 73 ~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 73 TLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp HHHHHGGGSCTTCEEEE
T ss_pred HHHHHHhhCCCCCEEEE
Confidence 88999889988876543
No 375
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=85.25 E-value=0.55 Score=36.95 Aligned_cols=45 Identities=11% Similarity=0.188 Sum_probs=30.5
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCcChHHHHHHhhCC-----CCeEEEeec
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYP-----HIKGINFDL 53 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~G~~~~~l~~~~~-----~~~~~~~D~ 53 (184)
+...+++.+. ....-+|+|+|+|+|.++..+++... ..++..++.
T Consensus 125 la~~~~~~~~-~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~ 174 (432)
T 4f3n_A 125 LARPVAQALD-ASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDL 174 (432)
T ss_dssp HHHHHHHHHH-HHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred HHHHHHHHHH-hcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEc
Confidence 3444444443 11257999999999999888875431 247888987
No 376
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=85.16 E-value=1.1 Score=33.85 Aligned_cols=90 Identities=8% Similarity=0.106 Sum_probs=58.0
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------CC-CC-CEEE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------VP-NG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~~-~~-D~i~ 84 (184)
+++..+||-+|+ |.|..+..+++.. +.++++++. +.-++.+++.. ...+ .|..+ . .+ .. |+++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g-a~~~-~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALG-ADET-VNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHT-CSEE-EETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcC-CCEE-EcCCcccHHHHHHHHhCCCCceEEE
Confidence 678899999997 6788888888775 568999887 55555554321 2211 12221 1 11 23 8776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
-... . ..++.+.+.|+|+|+++.....
T Consensus 241 ~~~g-~--------~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 241 DHTG-A--------LYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp ESSC-S--------SSHHHHHHHEEEEEEEEESSCC
T ss_pred ECCC-H--------HHHHHHHHhhccCCEEEEEecC
Confidence 6433 1 2477788999999999886543
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=84.72 E-value=1.2 Score=33.80 Aligned_cols=96 Identities=10% Similarity=0.041 Sum_probs=56.3
Q ss_pred HHhcCCC-CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCC-CCCCceEEEccc---CccCCCC-CEEEe
Q 030025 14 EAYKGFE-HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSP-EYPGVKHVGGDM---FQSVPNG-DAILI 85 (184)
Q Consensus 14 ~~~~~~~-~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-~~~~i~~~~~d~---~~~~~~~-D~i~~ 85 (184)
.... .. +..+||-+|+| .|..+..+++.. ++++++++. ++-++.++ +..--.++..+- ....... |+|+-
T Consensus 173 ~~~~-~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid 250 (357)
T 2cf5_A 173 SHFG-LKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVID 250 (357)
T ss_dssp HHTS-TTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEE
T ss_pred HhcC-CCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEE
Confidence 3445 66 78899999976 466667777665 468899987 55555554 331111121111 0111223 77765
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
...- + ..++...+.|+|+|+++....
T Consensus 251 ~~g~-----~---~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 251 TVPV-----H---HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCCS-----C---CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCC-----h---HHHHHHHHHhccCCEEEEeCC
Confidence 3221 1 135667789999999988654
No 378
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=84.65 E-value=1.8 Score=32.35 Aligned_cols=92 Identities=10% Similarity=0.007 Sum_probs=57.7
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---c----CC-CC-CEEEec
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---S----VP-NG-DAILIK 86 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~----~~-~~-D~i~~~ 86 (184)
+++..+||-.| +|.|..+..+++.. ++++++++. +.-++.+++..--..+..+-.+ . .+ .. |+++-+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 77889999998 34778888787765 568999986 6655655543211222111111 0 11 23 777653
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.. . ..+..+.+.|+|+|++++....
T Consensus 217 ~g-----~----~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 217 VG-----Q----DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp SC-----G----GGHHHHHTTEEEEEEEEECCCT
T ss_pred CC-----h----HHHHHHHHHhcCCCEEEEEecC
Confidence 32 1 2477888999999999987643
No 379
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=84.21 E-value=1 Score=34.00 Aligned_cols=91 Identities=11% Similarity=0.115 Sum_probs=57.1
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc--cCcc----CCC-C-CEEEech
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD--MFQS----VPN-G-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d--~~~~----~~~-~-D~i~~~~ 87 (184)
+++..+||-.|+ |.|..+..+++.. ++++++++. +.-++.+++..--..+..+ ..+. .+. . |+++-..
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence 778899999996 5688888888876 568999987 6555555543222222222 1111 122 3 7776533
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. . ..++.+.+.|+|+|++++...
T Consensus 236 g-----~----~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 236 G-----G----PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp C-----------CHHHHHHTEEEEEEEEEC--
T ss_pred c-----h----hHHHHHHHhhcCCCEEEEEEc
Confidence 2 1 147788899999999998654
No 380
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=84.08 E-value=2.2 Score=32.31 Aligned_cols=94 Identities=15% Similarity=0.023 Sum_probs=58.4
Q ss_pred HHhcCCCCC------CeEEEecCC-cChHH-HHHH-hhCCCCe-EEEeec-hh---HhhhCCCCCCceEEEcccCc-cC-
Q 030025 14 EAYKGFEHI------KQLVDVGGS-LGNTL-KAIT-SKYPHIK-GINFDL-PH---VIQHSPEYPGVKHVGGDMFQ-SV- 77 (184)
Q Consensus 14 ~~~~~~~~~------~~ilDiG~G-~G~~~-~~l~-~~~~~~~-~~~~D~-~~---~~~~a~~~~~i~~~~~d~~~-~~- 77 (184)
+... +++. .+||-+|+| .|..+ ..++ +.. ..+ +++++. ++ -++.+++. +.+.+ |..+ ++
T Consensus 160 ~~~~-~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga~~v--~~~~~~~~ 234 (357)
T 2b5w_A 160 EHAY-ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL-DATYV--DSRQTPVE 234 (357)
T ss_dssp HHHH-HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT-TCEEE--ETTTSCGG
T ss_pred HhcC-CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc-CCccc--CCCccCHH
Confidence 3344 5566 899999975 46667 7777 654 455 899987 55 56666543 33433 3332 11
Q ss_pred -----CCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 78 -----PNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 78 -----~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
... |+|+-.. ..+ ..++.+.+.|+|+|+++.....
T Consensus 235 ~i~~~~gg~Dvvid~~-----g~~---~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 235 DVPDVYEQMDFIYEAT-----GFP---KHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp GHHHHSCCEEEEEECS-----CCH---HHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHHhCCCCCEEEECC-----CCh---HHHHHHHHHHhcCCEEEEEeCC
Confidence 113 7765422 222 3588889999999999986543
No 381
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.94 E-value=5.3 Score=28.69 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=48.6
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCe-EEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIK-GINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~-~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
..+|.=||+|. | .++..+.+. +.+ +...|. ++..+...+.-++.. ..|..+...+.|+|+..-. +...
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~Dvvi~av~-----~~~~ 81 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEY-TTDLAEVNPYAKLYIVSLK-----DSAF 81 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEE-ESCGGGSCSCCSEEEECCC-----HHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCce-eCCHHHHhcCCCEEEEecC-----HHHH
Confidence 35788899872 3 333344443 234 777886 554443322223332 2233333334598887443 3333
Q ss_pred HHHHHHHHhhCCCCcEEEEE
Q 030025 98 LKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 98 ~~~l~~~~~~L~pgG~l~i~ 117 (184)
..+++++...++||..++-.
T Consensus 82 ~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 82 AELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp HHHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHHhhcCCCcEEEEC
Confidence 57788888888887765543
No 382
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.87 E-value=2.8 Score=31.00 Aligned_cols=86 Identities=12% Similarity=-0.005 Sum_probs=48.0
Q ss_pred CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc-ccCccCCCCCEEEechhhhcCChHHH
Q 030025 21 HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG-DMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 21 ~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~-d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
+.++|+=||+| .|......+..+ +.++++.|. +.-.+.+.+ .++..... +..+....+|+|+.....+.+..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~-~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~--- 230 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITE-MGLVPFHTDELKEHVKDIDICINTIPSMILNQ--- 230 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TTCEEEEGGGHHHHSTTCSEEEECCSSCCBCH---
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-CCCeEEchhhHHHHhhCCCEEEECCChhhhCH---
Confidence 56899999986 333333333444 468999997 443332211 13333322 22223445599998777654432
Q ss_pred HHHHHHHHhhCCCCcEEEE
Q 030025 98 LKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 98 ~~~l~~~~~~L~pgG~l~i 116 (184)
+..+.+|||+.++=
T Consensus 231 -----~~~~~mk~g~~lin 244 (300)
T 2rir_A 231 -----TVLSSMTPKTLILD 244 (300)
T ss_dssp -----HHHTTSCTTCEEEE
T ss_pred -----HHHHhCCCCCEEEE
Confidence 13467899886654
No 383
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.80 E-value=6.5 Score=31.05 Aligned_cols=93 Identities=12% Similarity=0.153 Sum_probs=47.1
Q ss_pred CeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCC------CCce-----------E-EEcccCccCCCCC
Q 030025 23 KQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEY------PGVK-----------H-VGGDMFQSVPNGD 81 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~------~~i~-----------~-~~~d~~~~~~~~D 81 (184)
-+|-=||.| ++...++..+ .+.+++++|. +.-++..++. +++. + ...|..+....+|
T Consensus 9 ~~~~vIGlG--~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTG--YVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 355566665 4443333321 2468999998 6655544432 1111 1 1122222233458
Q ss_pred EEEech--hh---hcCCh-HHHHHHHHHHHhhCCCCcEEEEE
Q 030025 82 AILIKW--IL---HDWSD-EHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 82 ~i~~~~--~l---~~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
+|++.- .. +.-+| .....+++.+.+.|+||-.++..
T Consensus 87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ 128 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK 128 (446)
T ss_dssp EEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC
T ss_pred EEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 887742 11 10000 12446788899999988766553
No 384
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.79 E-value=0.53 Score=34.83 Aligned_cols=90 Identities=9% Similarity=0.099 Sum_probs=55.7
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc----ccCccCCCCCEEEechhhhc
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG----DMFQSVPNGDAILIKWILHD 91 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~----d~~~~~~~~D~i~~~~~l~~ 91 (184)
+++..+||-+|+ |.|..+..+++.. +.++++++. +.-++.+++..--..+.. |..+.....|+++- ..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g--- 197 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VR--- 197 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CS---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CC---
Confidence 667889999997 4678888888776 468999987 555555544321112211 11112222287775 22
Q ss_pred CChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 92 WSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 92 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. ..++.+.+.|+|+|+++....
T Consensus 198 --~----~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 198 --G----KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --C----TTHHHHHTTEEEEEEEEEC--
T ss_pred --H----HHHHHHHHhhccCCEEEEEeC
Confidence 1 137788899999999987654
No 385
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.39 E-value=4.6 Score=31.17 Aligned_cols=96 Identities=14% Similarity=0.033 Sum_probs=54.6
Q ss_pred CCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc---ccCc---c--CCCC-CEEEech
Q 030025 19 FEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG---DMFQ---S--VPNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~---d~~~---~--~~~~-D~i~~~~ 87 (184)
+++..+||=+|+| .|..+..+++.....+++++|. +.-++.+++..--..+.. |..+ . -+.. |+|+-..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~ 290 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEAT 290 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECC
Confidence 6778899999986 3777777777764338999987 666666655421112211 1111 0 1123 8887532
Q ss_pred hhhcCChH--HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDE--HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
..+ ....+++.+.+.++|+|++++...
T Consensus 291 -----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 291 -----GVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp -----SCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred -----CCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 222 111223333344599999998654
No 386
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.28 E-value=1.4 Score=32.83 Aligned_cols=89 Identities=9% Similarity=-0.031 Sum_probs=55.6
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------C-CCC-CEEE
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------V-PNG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~-~~~-D~i~ 84 (184)
+++..+||-.| +|.|..+..+++.. +.++++++. ++-++.+++.. .... .|..+ . . +.. |+++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g-~~~~-~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAG-AWQV-INYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHT-CSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcC-CCEE-EECCCccHHHHHHHHhCCCCceEEE
Confidence 77889999999 45677777777664 468888887 55555544321 2111 12211 1 1 123 7776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.+.. . ..++.+.+.|+++|++++...
T Consensus 215 ~~~g-----~----~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 215 DSVG-----R----DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp ECSC-----G----GGHHHHHHTEEEEEEEEECCC
T ss_pred ECCc-----h----HHHHHHHHHhcCCCEEEEEec
Confidence 5432 1 347888899999999988654
No 387
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.17 E-value=3.1 Score=31.33 Aligned_cols=95 Identities=17% Similarity=0.090 Sum_probs=57.5
Q ss_pred HHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCC-eEEEeec-hhHhhhCCCCCCceEEEc---ccCc---cC--CCC-C
Q 030025 14 EAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHI-KGINFDL-PHVIQHSPEYPGVKHVGG---DMFQ---SV--PNG-D 81 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~i~~~~~---d~~~---~~--~~~-D 81 (184)
+... + +..+||-+|+| .|..+..+++.. +. ++++++. +.-++.+++..--..+.. |+.+ .. +.. |
T Consensus 162 ~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 162 LAGP-I-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TTSC-C-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred HhcC-C-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 3344 6 78899999986 467777777765 45 8888886 555555543321111111 1111 01 123 7
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+|+-... .+ ..++.+.+.|+|+|+++....
T Consensus 239 ~vid~~g-----~~---~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 239 VFLEFSG-----AP---KALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEECSC-----CH---HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----CH---HHHHHHHHHHhcCCEEEEEcc
Confidence 7765332 12 357888999999999988654
No 388
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.15 E-value=0.64 Score=34.62 Aligned_cols=92 Identities=15% Similarity=0.112 Sum_probs=55.9
Q ss_pred HHhcCCCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCccCCCC-CEEEechhhhc
Q 030025 14 EAYKGFEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNG-DAILIKWILHD 91 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~-D~i~~~~~l~~ 91 (184)
+... +++..+||-+|+| .|..+..+++.. ++++++++.+.-++.+++. +...+..| .+..+.. |+|+-...
T Consensus 136 ~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~l-Ga~~v~~d-~~~v~~g~Dvv~d~~g--- 208 (315)
T 3goh_A 136 EKIP-LTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVSASLSQALAAKR-GVRHLYRE-PSQVTQKYFAIFDAVN--- 208 (315)
T ss_dssp TTSC-CCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSCCHHHHHHH-TEEEEESS-GGGCCSCEEEEECC-----
T ss_pred hhcC-CCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEEChhhHHHHHHc-CCCEEEcC-HHHhCCCccEEEECCC---
Confidence 4444 7788999999986 478888888775 4588888753333444332 23333234 3333444 87764321
Q ss_pred CChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 92 WSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 92 ~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+ .+..+.+.|+|+|+++...
T Consensus 209 --~~----~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 --SQ----NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -----------TTGGGEEEEEEEEEEC
T ss_pred --ch----hHHHHHHHhcCCCEEEEEe
Confidence 11 2366788999999999874
No 389
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=83.04 E-value=2.6 Score=32.09 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=55.3
Q ss_pred HHhcCCC-CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCC-CCCCceEEEcccCc-----cCCCC-CEE
Q 030025 14 EAYKGFE-HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSP-EYPGVKHVGGDMFQ-----SVPNG-DAI 83 (184)
Q Consensus 14 ~~~~~~~-~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-~~~~i~~~~~d~~~-----~~~~~-D~i 83 (184)
.... .. +..+||-+|+| .|..+..+++.. +.++++++. +.-++.++ +. +...+ .|..+ ..... |+|
T Consensus 180 ~~~~-~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~l-Ga~~v-~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 180 KYFG-LDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNF-GADSF-LVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp HHTT-CCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTS-CCSEE-EETTCHHHHHHTTTCEEEE
T ss_pred HhcC-cCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc-CCceE-EeccCHHHHHHhhCCCCEE
Confidence 3445 66 78899999976 366666777665 568888886 55555544 33 22211 12111 11123 887
Q ss_pred EechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 84 LIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 84 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+-..... ..++.+.+.|+|+|+++....
T Consensus 256 id~~g~~--------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 256 IDTVSAV--------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EECCSSC--------CCSHHHHHHEEEEEEEEECCC
T ss_pred EECCCcH--------HHHHHHHHHHhcCCEEEEEcc
Confidence 6533211 125566788899999988653
No 390
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=82.15 E-value=9.5 Score=28.41 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=45.9
Q ss_pred CeEEEecCCcChHHHHHHhh--CCC-CeEEEeec-h-------hHhhhCCCCCCceEEEc-ccCccCCCCCEEEechhhh
Q 030025 23 KQLVDVGGSLGNTLKAITSK--YPH-IKGINFDL-P-------HVIQHSPEYPGVKHVGG-DMFQSVPNGDAILIKWILH 90 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~--~~~-~~~~~~D~-~-------~~~~~a~~~~~i~~~~~-d~~~~~~~~D~i~~~~~l~ 90 (184)
.+|.=||+| .....++.. ..+ .++++.|. + ...+.+.+ .++ .. +..+-...+|+|++.-
T Consensus 25 m~IgvIG~G--~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~-~g~---~~~s~~e~~~~aDvVi~av--- 95 (317)
T 4ezb_A 25 TTIAFIGFG--EAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE-LGV---EPLDDVAGIACADVVLSLV--- 95 (317)
T ss_dssp CEEEEECCS--HHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH-TTC---EEESSGGGGGGCSEEEECC---
T ss_pred CeEEEECcc--HHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH-CCC---CCCCHHHHHhcCCEEEEec---
Confidence 568888876 333333332 124 58889997 4 23332221 233 22 3333333459888743
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
+++...+.++.+...++||..++-
T Consensus 96 --p~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 96 --VGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp --CGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred --CCHHHHHHHHHHHhhcCCCCEEEE
Confidence 333334567888889988876554
No 391
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.45 E-value=5.5 Score=29.02 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=47.7
Q ss_pred CeEEEecC-Cc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 23 KQLVDVGG-SL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 23 ~~ilDiG~-G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.+|.=||+ |. | .++..+.+. +.+++++|. +...+.+.+. ++.. .+..+.....|+|+..- ++....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~--~~~~~~~~~aDvVi~av-----~~~~~~ 81 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGM-GIPL--TDGDGWIDEADVVVLAL-----PDNIIE 81 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHT-TCCC--CCSSGGGGTCSEEEECS-----CHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhc-CCCc--CCHHHHhcCCCEEEEcC-----CchHHH
Confidence 47888988 63 3 333333333 357888886 5444433322 2222 12222233449988744 333455
Q ss_pred HHHHHHHhhCCCCcEEEE
Q 030025 99 KLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 99 ~~l~~~~~~L~pgG~l~i 116 (184)
.+++++...++||..++-
T Consensus 82 ~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 82 KVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp HHHHHHGGGSCTTCEEEE
T ss_pred HHHHHHHHhCCCCCEEEE
Confidence 788888888988776553
No 392
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=80.83 E-value=2.6 Score=31.73 Aligned_cols=88 Identities=10% Similarity=0.190 Sum_probs=54.0
Q ss_pred CCCeEEEec-CC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc--ccCc---cC-CCC-CEEEechhhh
Q 030025 21 HIKQLVDVG-GS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG--DMFQ---SV-PNG-DAILIKWILH 90 (184)
Q Consensus 21 ~~~~ilDiG-~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~--d~~~---~~-~~~-D~i~~~~~l~ 90 (184)
+..+||=+| +| .|..+..+++.. ++++++++. +.-++.+++..--..+.. |..+ .. +.. |+|+-..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~--- 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTF--- 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESS---
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECC---
Confidence 678999994 43 677787788765 569999987 666666554321111111 1111 11 123 7776532
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
..+ ..++.+.+.|+|+|+++..
T Consensus 226 --g~~---~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 226 --NTD---MYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp --CHH---HHHHHHHHHEEEEEEEEES
T ss_pred --Cch---HHHHHHHHHhccCCEEEEE
Confidence 222 4578889999999999764
No 393
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.05 E-value=7.1 Score=26.73 Aligned_cols=93 Identities=11% Similarity=0.132 Sum_probs=50.7
Q ss_pred eEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc----CCCCCEEEechhhhcCChHH
Q 030025 24 QLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS----VPNGDAILIKWILHDWSDEH 96 (184)
Q Consensus 24 ~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~----~~~~D~i~~~~~l~~~~~~~ 96 (184)
+||=.| |+|.+...+++.+ .+.++++++. +.-.+... ++++++.+|+.++ +...|+|+.......-....
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCccccch
Confidence 566665 4555555555442 3568888886 44443332 6899999999873 22238887755442211111
Q ss_pred HHHHHHHHHhhCCC--CcEEEEEee
Q 030025 97 CLKLLKNCHKSIPE--GGKVIVVES 119 (184)
Q Consensus 97 ~~~~l~~~~~~L~p--gG~l~i~~~ 119 (184)
.....+.+.+.++. .+++++...
T Consensus 79 ~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp HHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEec
Confidence 12333444444433 467776543
No 394
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=80.05 E-value=4.1 Score=30.39 Aligned_cols=89 Identities=8% Similarity=0.032 Sum_probs=56.5
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------C-CCC-CEEE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------V-PNG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~-~~~-D~i~ 84 (184)
+.+..+||-.|+ |.|..+..+++.. +.++++++. ++-++.+++.. .... .|..+ . . +.. |+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g-~~~~-~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLG-CHHT-INYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHT-CSEE-EETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcC-CCEE-EECCCHHHHHHHHHHhCCCCCeEEE
Confidence 778899999994 6788887777775 568999987 54555544321 2211 12221 1 0 123 7776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
-+.. . ..++.+.+.|+|+|+++....
T Consensus 220 ~~~g-----~----~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 220 DSIG-----K----DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp ECSC-----T----TTHHHHHHTEEEEEEEEECCC
T ss_pred ECCc-----H----HHHHHHHHhhccCCEEEEEec
Confidence 5332 1 247788899999999988654
No 395
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=80.02 E-value=2.7 Score=33.32 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=57.9
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHh-------hhCCCCCCceEEEcccCccCCCCCEEEechhhhcCC
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVI-------QHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWS 93 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~-------~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~ 93 (184)
+.++|.=||+|+=..+.++--+-..+.++.--.+... +.|.+ ++.. ..++.+..+.+|+|... +|
T Consensus 36 kgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~-~Gf~--v~~~~eA~~~ADvV~~L-----~P 107 (491)
T 3ulk_A 36 QGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATE-NGFK--VGTYEELIPQADLVINL-----TP 107 (491)
T ss_dssp TTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHH-TTCE--EEEHHHHGGGCSEEEEC-----SC
T ss_pred cCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHH-CCCE--ecCHHHHHHhCCEEEEe-----CC
Confidence 4689999999998877777766556654433223322 22211 3333 33343334445988762 35
Q ss_pred hHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 94 DEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 94 ~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|+....+++++...|+||-.|.++.
T Consensus 108 D~~q~~vy~~I~p~lk~G~~L~faH 132 (491)
T 3ulk_A 108 DKQHSDVVRTVQPLMKDGAALGYSH 132 (491)
T ss_dssp GGGHHHHHHHHGGGSCTTCEEEESS
T ss_pred hhhHHHHHHHHHhhCCCCCEEEecC
Confidence 6655688999999999999999854
No 396
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=79.94 E-value=14 Score=27.62 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=53.9
Q ss_pred CCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEechhhh
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKWILH 90 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~~l~ 90 (184)
+.++|+=+|+ |..+..+++.. .+. ++.+|. ++.++ ++ ..++.++.+|..++ ..++|.+++..
T Consensus 114 ~~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~--- 185 (336)
T 1lnq_A 114 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VL-RSGANFVHGDPTRVSDLEKANVRGARAVIVDL--- 185 (336)
T ss_dssp --CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-HTTCEEEESCTTSHHHHHHTCSTTEEEEEECC---
T ss_pred ccCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-hCCcEEEEeCCCCHHHHHhcChhhccEEEEcC---
Confidence 3467888876 67777777663 234 888887 66665 33 26789999999872 12237776632
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
++++.--..-...+.+.|..+++.
T Consensus 186 --~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 186 --ESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp --SSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred --CccHHHHHHHHHHHHHCCCCeEEE
Confidence 333333445556677888877665
No 397
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=79.67 E-value=1.4 Score=33.11 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=33.5
Q ss_pred CceEEEcccCc---cCCC-C-CEEEechhhhcC-----C-------hHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 65 GVKHVGGDMFQ---SVPN-G-DAILIKWILHDW-----S-------DEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 65 ~i~~~~~d~~~---~~~~-~-D~i~~~~~l~~~-----~-------~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
...++.+|..+ .++. . |+|++.-....- . ......++++++++|+|||.+++.-
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 45666777654 2333 2 777774332211 0 0134578999999999999998843
No 398
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=79.62 E-value=0.71 Score=35.71 Aligned_cols=92 Identities=12% Similarity=0.168 Sum_probs=51.5
Q ss_pred CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcc------------------------cC
Q 030025 21 HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGD------------------------MF 74 (184)
Q Consensus 21 ~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d------------------------~~ 74 (184)
++.+|+=+|+| .|..+..++... +.+++++|. +.-++.+++. +.++...+ +.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 46899999998 455555566655 568999998 6555544432 33333211 00
Q ss_pred ccCCCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 75 QSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 75 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
+....+|+|+..-..-.-..+ .-+-++..+.+|||+.++=
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap--~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAP--RLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCC--CCBCHHHHHTSCTTCEEEE
T ss_pred HHHhcCCEEEECCCCCCcccc--eeecHHHHhcCCCCcEEEE
Confidence 112344999864211100011 0123677788999987664
No 399
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.52 E-value=11 Score=25.12 Aligned_cols=88 Identities=9% Similarity=0.094 Sum_probs=49.8
Q ss_pred CCeEEEecCCcChHHHHHHhhC--C-CCeEEEeec-hhHhhhCCCCCCceEEEcccCc-----c---CCCCCEEEechhh
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--P-HIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-----S---VPNGDAILIKWIL 89 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~-~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-----~---~~~~D~i~~~~~l 89 (184)
..+|+=+|+| ..+..+++.. . +.+++++|. ++..+.+++ .++..+.+|..+ . ....|+|+...
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~-- 113 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAM-- 113 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECC--
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC--
Confidence 4588988875 4444444332 2 457889987 655554443 356777777754 1 12238887632
Q ss_pred hcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 90 HDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
++++....+-...+.+.|++.++..
T Consensus 114 ---~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 114 ---PHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ---SSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ---CChHHHHHHHHHHHHHCCCCEEEEE
Confidence 2222222333455667788887763
No 400
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=79.51 E-value=3 Score=31.51 Aligned_cols=91 Identities=10% Similarity=0.062 Sum_probs=56.6
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc---c----CCCC-CEEEech
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ---S----VPNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~---~----~~~~-D~i~~~~ 87 (184)
+++..+||-+| +|.|..+..+++.. ++++++++. +.-++.+++..--..+..+-.+ . .+.. |+++-+.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 77889999995 34678888888765 568999996 6555555543211122111111 0 1223 7776533
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. . ..+....+.|+|+|++++...
T Consensus 244 g-----~----~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 244 G-----A----AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp C-----G----GGHHHHHHTEEEEEEEEECCC
T ss_pred C-----H----HHHHHHHHHhccCCEEEEEEe
Confidence 2 1 147778899999999988653
No 401
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=79.35 E-value=3.6 Score=31.05 Aligned_cols=95 Identities=13% Similarity=0.084 Sum_probs=58.2
Q ss_pred HHhcCCCCC--CeEEEecC--CcChHHHHHHhhCCCC-eEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------CC
Q 030025 14 EAYKGFEHI--KQLVDVGG--SLGNTLKAITSKYPHI-KGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------VP 78 (184)
Q Consensus 14 ~~~~~~~~~--~~ilDiG~--G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~~ 78 (184)
+... +.+. .+||-.|+ |.|..+..+++.. +. ++++++. ++-++.+++.-+.... .|..+ . .+
T Consensus 152 ~~~~-~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~ 228 (357)
T 2zb4_A 152 EKGH-ITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAA-INYKKDNVAEQLRESCP 228 (357)
T ss_dssp HHSC-CCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEE-EETTTSCHHHHHHHHCT
T ss_pred HhcC-CCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceE-EecCchHHHHHHHHhcC
Confidence 4444 7778 99999997 4667777777765 56 8888887 5555544431122221 12221 1 11
Q ss_pred CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 79 NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 79 ~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
.. |+++-+.. . ..++.+.+.|+|+|++++....
T Consensus 229 ~~~d~vi~~~G-----~----~~~~~~~~~l~~~G~iv~~G~~ 262 (357)
T 2zb4_A 229 AGVDVYFDNVG-----G----NISDTVISQMNENSHIILCGQI 262 (357)
T ss_dssp TCEEEEEESCC-----H----HHHHHHHHTEEEEEEEEECCCG
T ss_pred CCCCEEEECCC-----H----HHHHHHHHHhccCcEEEEECCc
Confidence 13 77665332 1 3588889999999999986543
No 402
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=79.04 E-value=9.3 Score=30.50 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=36.6
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCC-C---CCceEEEcccCc
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPE-Y---PGVKHVGGDMFQ 75 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-~---~~i~~~~~d~~~ 75 (184)
..+++|+=||.|.++.-+.+..- -.+.++|. +.+.+.-+. + ++..++.+|+.+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~ 145 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRD 145 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHH
T ss_pred cceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhcccCCCcceeccchhh
Confidence 35899999999999988877632 24677887 655443322 1 566777788765
No 403
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=78.22 E-value=3.1 Score=33.38 Aligned_cols=88 Identities=9% Similarity=0.037 Sum_probs=50.8
Q ss_pred CCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHH
Q 030025 19 FEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEH 96 (184)
Q Consensus 19 ~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~ 96 (184)
..+.++|+=+|+| .|......++.+ +.+++++|. +.-.+.+++. ++.+ .++.+.....|+|+....-.+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~-Ga~~--~~l~e~l~~aDvVi~atgt~~----- 341 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME-GFDV--VTVEEAIGDADIVVTATGNKD----- 341 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TCEE--CCHHHHGGGCSEEEECSSSSC-----
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCEE--ecHHHHHhCCCEEEECCCCHH-----
Confidence 3467899999986 344444444444 469999997 5544444322 3332 222222334599887532222
Q ss_pred HHHHHH-HHHhhCCCCcEEEEEe
Q 030025 97 CLKLLK-NCHKSIPEGGKVIVVE 118 (184)
Q Consensus 97 ~~~~l~-~~~~~L~pgG~l~i~~ 118 (184)
++. +..+.+||||+++...
T Consensus 342 ---~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 342 ---IIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ---SBCHHHHHHSCTTCEEEECS
T ss_pred ---HHHHHHHHhcCCCcEEEEeC
Confidence 232 5667789999988644
No 404
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=78.21 E-value=4.3 Score=30.69 Aligned_cols=89 Identities=8% Similarity=-0.026 Sum_probs=55.1
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c--------CC-CC-CEEE
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S--------VP-NG-DAIL 84 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~--------~~-~~-D~i~ 84 (184)
+.+..+||-.| +|.|..+..+++.. ++++++++. +.-++.+++.. .... .|..+ . .. .. |+++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g-~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLG-AAAG-FNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT-CSEE-EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcC-CcEE-EecCChHHHHHHHHHhcCCCceEEE
Confidence 77889999998 35777777777765 568999986 55555553321 1111 12211 1 11 23 7776
Q ss_pred echhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 85 IKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 85 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
-+.. .+ .++...+.|+|+|++++...
T Consensus 237 ~~~G-----~~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 237 DCIG-----GS----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp ESSC-----GG----GHHHHHHHEEEEEEEEECCC
T ss_pred ECCC-----ch----HHHHHHHhccCCCEEEEEec
Confidence 5332 11 36777889999999998654
No 405
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=78.05 E-value=0.87 Score=35.53 Aligned_cols=41 Identities=12% Similarity=0.120 Sum_probs=29.2
Q ss_pred CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCC
Q 030025 21 HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPE 62 (184)
Q Consensus 21 ~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~ 62 (184)
++.+|+=+|+| .|..+..++... +.+++++|. +.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 45899999998 456666666665 569999998 655555443
No 406
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=77.78 E-value=12 Score=24.27 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=51.3
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-h-hHhhhCCC--CCCceEEEcccCcc-------CCCCCEEEechh
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-P-HVIQHSPE--YPGVKHVGGDMFQS-------VPNGDAILIKWI 88 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~-~~~~~a~~--~~~i~~~~~d~~~~-------~~~~D~i~~~~~ 88 (184)
..+|+=+|+ |..+..+++.. .+.+++.+|. + +..+.... ..++.++.+|..++ ...+|+|++..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~- 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS- 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS-
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec-
Confidence 356777775 66666665542 3467888886 3 22211111 24688999998762 23348887743
Q ss_pred hhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 89 LHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 89 l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
++++.-..+....+.+.|..+++.
T Consensus 80 ----~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 80 ----DNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp ----SCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred ----CChHHHHHHHHHHHHHCCCCEEEE
Confidence 223333455566667777777665
No 407
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.73 E-value=9.7 Score=29.96 Aligned_cols=97 Identities=11% Similarity=-0.008 Sum_probs=52.7
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEec
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIK 86 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~ 86 (184)
...+.......-..++|+=+|+|. |......++.+ +.++++.|. +.....+.. .+.. ..++.+.+..+|+|+..
T Consensus 207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~-~G~~--v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDPICALQACM-DGFR--LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-TTCE--ECCHHHHTTTCSEEEEC
T ss_pred HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHH-cCCE--eccHHHHHhcCCEEEEC
Confidence 344444444123678999998884 44444444444 679999997 532222211 2222 22333344556998874
Q ss_pred hhhhcCChHHHHHHHH-HHHhhCCCCcEEEEE
Q 030025 87 WILHDWSDEHCLKLLK-NCHKSIPEGGKVIVV 117 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~-~~~~~L~pgG~l~i~ 117 (184)
..-.+ ++. +..+.+|||+.++-.
T Consensus 283 tgt~~--------lI~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 283 TGNKN--------VVTREHLDRMKNSCIVCNM 306 (435)
T ss_dssp SSCSC--------SBCHHHHHHSCTTEEEEEC
T ss_pred CCCcc--------cCCHHHHHhcCCCcEEEEe
Confidence 22112 232 566788999877654
No 408
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=77.53 E-value=1.1 Score=33.90 Aligned_cols=122 Identities=13% Similarity=0.136 Sum_probs=73.5
Q ss_pred CeEEEecCCcChHHHHHHhhCCC-CeEEEeec-hhHhhhCCC-CCCceEEEcccCc-c---CC--CCCEEEechhhhcCC
Q 030025 23 KQLVDVGGSLGNTLKAITSKYPH-IKGINFDL-PHVIQHSPE-YPGVKHVGGDMFQ-S---VP--NGDAILIKWILHDWS 93 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~-~~~i~~~~~d~~~-~---~~--~~D~i~~~~~l~~~~ 93 (184)
.+++|+-||.|..+..+.+..-. -.+.++|. +.+.+.-+. +++..+...|+.+ . ++ ..|+++.......++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 47999999999999998887422 34678888 666554443 3667778888876 2 23 239988755544432
Q ss_pred --------hHHHHHHHHHHHh---hCC-CCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCCccccCHHHHHHHHH
Q 030025 94 --------DEHCLKLLKNCHK---SIP-EGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPGGKERTKHEFTTLAT 161 (184)
Q Consensus 94 --------~~~~~~~l~~~~~---~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (184)
+++...++.++.+ .++ |. +++.|....- .. + .+.+.+.+.|+
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~--~~vlENV~gl-------------~~---------~--~~~~~i~~~l~ 137 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNVD--YILMENVKGF-------------EN---------S--TVRNLFIDKLK 137 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTCC--EEEEEECTTG-------------GG---------S--HHHHHHHHHHH
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCCC--EEEEecchhh-------------hh---------h--hHHHHHHHHHH
Confidence 1111123433333 344 64 6666654311 00 0 12467888899
Q ss_pred HcCCceeEE
Q 030025 162 EAGFSGIRF 170 (184)
Q Consensus 162 ~aGf~~i~~ 170 (184)
+.||.....
T Consensus 138 ~~GY~v~~~ 146 (333)
T 4h0n_A 138 ECNFIYQEF 146 (333)
T ss_dssp HTTEEEEEE
T ss_pred hCCCeEEEE
Confidence 999886543
No 409
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=77.01 E-value=1.2 Score=34.66 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=27.7
Q ss_pred CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCC
Q 030025 21 HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSP 61 (184)
Q Consensus 21 ~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~ 61 (184)
+..+|+=+|+| .|..+..+++.+. .+++.+|. +..++.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHH
Confidence 36789999987 4555566666664 68999997 55554443
No 410
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=76.35 E-value=1.8 Score=33.41 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=26.6
Q ss_pred CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhC
Q 030025 21 HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHS 60 (184)
Q Consensus 21 ~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a 60 (184)
+..+|+=+|+| .|..+..+++.+ +.+++.+|. +.-.+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQV 211 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence 46899999987 455555666666 468999997 5444433
No 411
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=75.50 E-value=3.6 Score=30.56 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=28.2
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCC----CeEEEeec
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPH----IKGINFDL 53 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~----~~~~~~D~ 53 (184)
....|+=+|||.|.....+++.+|. ++.+.+|.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 3569999999999999999987764 68999996
No 412
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=75.48 E-value=4 Score=30.29 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=45.3
Q ss_pred HHhhCCCCeEEEeechhHhhhCCC-------CCCceEE-EcccCccC--CCCCEEEech----hhhcCC---hHH--HHH
Q 030025 39 ITSKYPHIKGINFDLPHVIQHSPE-------YPGVKHV-GGDMFQSV--PNGDAILIKW----ILHDWS---DEH--CLK 99 (184)
Q Consensus 39 l~~~~~~~~~~~~D~~~~~~~a~~-------~~~i~~~-~~d~~~~~--~~~D~i~~~~----~l~~~~---~~~--~~~ 99 (184)
+..+.++-++..++.+-. .-.+ .+++.+. ..|+..+. +.+|+|++.- .-||.. |.+ ..-
T Consensus 158 ~~~k~~g~~vl~v~~~~~--~p~k~v~wi~Pi~GAt~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~L 235 (320)
T 2hwk_A 158 FVSKLKGRTVLVVGEKLS--VPGKMVDWLSDRPEATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM 235 (320)
T ss_dssp HHHTSSCSEEEEEESCCC--CTTSEEEEEESSTTCSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEEecccc--cCCceeEeeccCCCceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHH
Confidence 444455666666652111 1112 2567777 88887743 3349998843 344412 111 113
Q ss_pred HHHHHHhhCCCCcEEEEEee
Q 030025 100 LLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 100 ~l~~~~~~L~pgG~l~i~~~ 119 (184)
+++.+.+.|+|||.+++--.
T Consensus 236 al~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp THHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCceEEEEEe
Confidence 56777888999999999543
No 413
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=74.58 E-value=13 Score=27.36 Aligned_cols=85 Identities=8% Similarity=0.094 Sum_probs=38.7
Q ss_pred eEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHH-
Q 030025 24 QLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLK- 99 (184)
Q Consensus 24 ~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~- 99 (184)
+|-=||.| .....|+... .+.++++.|. +...+...+. ++.. ..+..+-....|+|++... ++.....
T Consensus 7 kIgfIGLG--~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~-~~s~~e~~~~~dvvi~~l~----~~~~~~~v 78 (297)
T 4gbj_A 7 KIAFLGLG--NLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-GATV-VENAIDAITPGGIVFSVLA----DDAAVEEL 78 (297)
T ss_dssp EEEEECCS--TTHHHHHHHHHHTTCEEEEC-------CTTTTT-TCEE-CSSGGGGCCTTCEEEECCS----SHHHHHHH
T ss_pred cEEEEecH--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-CCeE-eCCHHHHHhcCCceeeecc----chhhHHHH
Confidence 45566655 4444444331 3568889997 5444433322 2221 1122222233488877432 1222222
Q ss_pred HHHHHHhhCCCCcEEEE
Q 030025 100 LLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 100 ~l~~~~~~L~pgG~l~i 116 (184)
+...+...++||+.++-
T Consensus 79 ~~~~~~~~~~~~~iiid 95 (297)
T 4gbj_A 79 FSMELVEKLGKDGVHVS 95 (297)
T ss_dssp SCHHHHHHHCTTCEEEE
T ss_pred HHHHHHhhcCCCeEEEE
Confidence 34567788889886554
No 414
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=74.40 E-value=4.2 Score=30.25 Aligned_cols=91 Identities=11% Similarity=0.024 Sum_probs=53.5
Q ss_pred CCCCC-eEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc-c----cCccC-CCC-CEEEech
Q 030025 19 FEHIK-QLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG-D----MFQSV-PNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~-~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~-d----~~~~~-~~~-D~i~~~~ 87 (184)
+.+.. +||-+|+ |.|..+..+++.. ++++++++. ++-++.+++..--..+.. + ..... ... |+++-..
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~ 224 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPV 224 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECS
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECC
Confidence 55554 8999996 5788888888876 468888886 554455444311111111 1 01111 123 7765432
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
. . ..+..+.+.++|+|++++...
T Consensus 225 g-----~----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 225 G-----G----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp T-----T----TTHHHHHHTEEEEEEEEECSC
T ss_pred c-----H----HHHHHHHHhhccCCEEEEEee
Confidence 2 1 137778899999999988653
No 415
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=74.31 E-value=31 Score=27.45 Aligned_cols=97 Identities=18% Similarity=0.139 Sum_probs=50.5
Q ss_pred CCCeEEEecCCcChHHHH-HHhhCCCC-eEEEeec-hh----HhhhCCC-CCCc------------------eE-EEccc
Q 030025 21 HIKQLVDVGGSLGNTLKA-ITSKYPHI-KGINFDL-PH----VIQHSPE-YPGV------------------KH-VGGDM 73 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~-l~~~~~~~-~~~~~D~-~~----~~~~a~~-~~~i------------------~~-~~~d~ 73 (184)
+.++|.=||+|.=....+ .+...++. +++++|. ++ -++..++ ...+ .+ ...|
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 457888998885333222 22223356 8999998 66 4443332 1111 11 1222
Q ss_pred CccCCCCCEEEechhhhc-------CChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 74 FQSVPNGDAILIKWILHD-------WSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 74 ~~~~~~~D~i~~~~~l~~-------~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+....+|+|++.-.-.. ..-.......+.+.+.|+||-.++...
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 222334488876432111 111223456788899999887655443
No 416
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=74.17 E-value=8.8 Score=28.44 Aligned_cols=93 Identities=8% Similarity=-0.014 Sum_probs=56.5
Q ss_pred HHhcCCCCCCeEEEec-C-CcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCc----cCCCCCEEEech
Q 030025 14 EAYKGFEHIKQLVDVG-G-SLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQ----SVPNGDAILIKW 87 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG-~-G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~----~~~~~D~i~~~~ 87 (184)
+... +++..+||=+| + |.|..+..+++.. ++++++++.+.-.+.+++..--..+..+-.+ .....|+++-..
T Consensus 146 ~~~~-~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 146 NQAE-VKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp HHTT-CCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESS
T ss_pred HhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECC
Confidence 4555 88889999996 4 4788888888876 5688888763335555443211122111111 111227776522
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
..+ .+..+.+.|+|+|+++..
T Consensus 224 -----g~~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 224 -----GGD----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -----CHH----HHHHHGGGEEEEEEEEEC
T ss_pred -----CcH----HHHHHHHhccCCCEEEEe
Confidence 222 247889999999999975
No 417
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=73.92 E-value=7.8 Score=28.82 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=51.2
Q ss_pred CCCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCC-----CCCceEEEcccCccCCCCCEEEechh----
Q 030025 21 HIKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPE-----YPGVKHVGGDMFQSVPNGDAILIKWI---- 88 (184)
Q Consensus 21 ~~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----~~~i~~~~~d~~~~~~~~D~i~~~~~---- 88 (184)
+..+|.=||+|. | .++..++......+++.+|+ ++....+.. .+++... .|. +.+.++|+|+...-
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d~-~~l~~aD~Vi~aag~~~p 90 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KDL-SASAHSKVVIFTVNSLGS 90 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SCG-GGGTTCSEEEECCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CCH-HHHCCCCEEEEcCCCCCC
Confidence 457899999995 3 35555655543347888887 432111111 1345442 554 45555699987641
Q ss_pred --------hhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 89 --------LHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 89 --------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.... +-..++++++.+.. |++++++..
T Consensus 91 G~tR~dl~~~n~--~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 91 SQSYLDVVQSNV--DMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp -CCHHHHHHHHH--HHHHHHHHHHHHHT-TTCEEEECS
T ss_pred CCCHHHHHHHHH--HHHHHHHHHHHHhC-CCeEEEEcC
Confidence 1111 11235666666664 999987744
No 418
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=73.66 E-value=2.2 Score=28.70 Aligned_cols=34 Identities=18% Similarity=0.058 Sum_probs=13.4
Q ss_pred CCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC
Q 030025 30 GSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY 63 (184)
Q Consensus 30 ~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~ 63 (184)
||||.=..-.+.++|+++.-.+--+...+.+|++
T Consensus 69 CGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~h 102 (162)
T 2vvp_A 69 GGSGNGEQIAANKVPGARCALAWSVQTAALAREH 102 (162)
T ss_dssp ESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHT
T ss_pred eCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHh
Confidence 3333333333444444444433323333344433
No 419
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=73.57 E-value=5.4 Score=29.57 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=53.3
Q ss_pred eEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc-cc--CccC-CCC-CEEEechhhhcCChH
Q 030025 24 QLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG-DM--FQSV-PNG-DAILIKWILHDWSDE 95 (184)
Q Consensus 24 ~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~-d~--~~~~-~~~-D~i~~~~~l~~~~~~ 95 (184)
+||=.|+ |.|..+..+++.. ++++++++. +.-.+.+++..--..+.. +. .... +.. |+++-. ...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~-----~g~- 221 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDT-----VGD- 221 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEES-----SCH-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEEC-----CCc-
Confidence 5999986 5788888888876 568999986 655555554321111111 10 1111 123 766542 232
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEee
Q 030025 96 HCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 96 ~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
..++.+.+.|+|+|++++...
T Consensus 222 ---~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 222 ---KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ---HHHHHHHHTEEEEEEEEECCC
T ss_pred ---HHHHHHHHHHhcCCEEEEEec
Confidence 268889999999999998653
No 420
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=73.50 E-value=23 Score=28.08 Aligned_cols=94 Identities=20% Similarity=0.216 Sum_probs=50.8
Q ss_pred CeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCc----------eEE-EcccCccCCCCCE
Q 030025 23 KQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGV----------KHV-GGDMFQSVPNGDA 82 (184)
Q Consensus 23 ~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i----------~~~-~~d~~~~~~~~D~ 82 (184)
.+|.=||+|. | .++..+++..++.+++++|. +.-++..++. +.+ .+. ..|..+....+|+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999884 3 34455555544678999998 6655554431 111 011 1121111223488
Q ss_pred EEech--hhh--------cCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 83 ILIKW--ILH--------DWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 83 i~~~~--~l~--------~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
|++.- ..+ ...-.....+++.+.+.++||..++.
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~ 133 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE 133 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE
Confidence 87752 221 01111244678889999988755443
No 421
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.16 E-value=28 Score=26.35 Aligned_cols=91 Identities=14% Similarity=0.105 Sum_probs=54.8
Q ss_pred CCCCeEEEecCC--cChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEc---ccCc---cC-CCC-CEEEechhh
Q 030025 20 EHIKQLVDVGGS--LGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGG---DMFQ---SV-PNG-DAILIKWIL 89 (184)
Q Consensus 20 ~~~~~ilDiG~G--~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~---d~~~---~~-~~~-D~i~~~~~l 89 (184)
.+..+||=+|++ .|..+..+++.. +++++++..+.-++.+++..--..+.. |..+ .. +.. |+++-.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~--- 238 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDC--- 238 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEES---
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEEC---
Confidence 677899999983 788888888876 557777644555555554422122221 1111 01 122 776642
Q ss_pred hcCChHHHHHHHHHHHhhC-CCCcEEEEEee
Q 030025 90 HDWSDEHCLKLLKNCHKSI-PEGGKVIVVES 119 (184)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~L-~pgG~l~i~~~ 119 (184)
...+ ..++.+.+.| ++||+++....
T Consensus 239 --~g~~---~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 239 --ITNV---ESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp --SCSH---HHHHHHHHHSCTTCEEEEESSC
T ss_pred --CCch---HHHHHHHHHhhcCCCEEEEEec
Confidence 2222 3577888888 69999998653
No 422
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=72.91 E-value=16 Score=27.66 Aligned_cols=64 Identities=9% Similarity=-0.022 Sum_probs=37.6
Q ss_pred CCCCeEEEecCCcChHHHHHHhh-CCCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc------CCCCCEEEech
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSK-YPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS------VPNGDAILIKW 87 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~-~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~------~~~~D~i~~~~ 87 (184)
.+.++|+=+||| ..+..+++. .....++..|. ..-++.++ +.+..+..|+.+. ..+.|+|++..
T Consensus 14 g~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~--~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 14 GRHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVK--EFATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp --CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHT--TTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHh--ccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 356789999985 444444433 22346677776 55555554 4566677787651 23349887754
No 423
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=72.81 E-value=3.5 Score=32.66 Aligned_cols=62 Identities=10% Similarity=0.157 Sum_probs=42.5
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEe
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILI 85 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~ 85 (184)
.++|+=+|| |..+..+++.. .+..++.+|. ++.++.+.+.-++..+.+|..++ ..++|++++
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 456776665 56666666664 3467999998 77777665555788999999872 233487766
No 424
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=72.80 E-value=2.2 Score=28.48 Aligned_cols=9 Identities=22% Similarity=0.121 Sum_probs=5.2
Q ss_pred CCeEEEecC
Q 030025 22 IKQLVDVGG 30 (184)
Q Consensus 22 ~~~ilDiG~ 30 (184)
.-.|.|+|+
T Consensus 38 G~eV~D~G~ 46 (155)
T 1o1x_A 38 GIEVEDHGT 46 (155)
T ss_dssp TCEEEECCC
T ss_pred CCEEEEeCC
Confidence 346666665
No 425
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=72.35 E-value=0.51 Score=36.38 Aligned_cols=95 Identities=8% Similarity=0.106 Sum_probs=49.3
Q ss_pred CCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCC-C-CCceEEEc---ccCccCCCCCEEEechhhhcCC
Q 030025 21 HIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPE-Y-PGVKHVGG---DMFQSVPNGDAILIKWILHDWS 93 (184)
Q Consensus 21 ~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-~-~~i~~~~~---d~~~~~~~~D~i~~~~~l~~~~ 93 (184)
+.++|+=+|+| .|.....+++.+ +.+++++|. +.-++.+++ . ..+..... ++.+.....|+|+.....-.-.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 45789999985 344444444544 458999997 555444333 1 12211111 1111122349887732111101
Q ss_pred hHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 94 DEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 94 ~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+ .-+.++..+.+||||.++-..
T Consensus 246 t~--~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 246 AP--KLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CC--CCBCHHHHTTSCTTCEEEEGG
T ss_pred Cc--ceecHHHHhcCCCCcEEEEEe
Confidence 11 012455667899999987654
No 426
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=72.29 E-value=2.5 Score=28.05 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=13.6
Q ss_pred CCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC
Q 030025 30 GSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY 63 (184)
Q Consensus 30 ~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~ 63 (184)
||||.=..-.+.++|+++.-.+.-+...+.+|++
T Consensus 65 CGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~h 98 (149)
T 3he8_A 65 CGTGLGISIAANKVPGIRAAVCTNSYMARMSREH 98 (149)
T ss_dssp ESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHT
T ss_pred cCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHh
Confidence 3333333333444444444444333333444443
No 427
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=71.66 E-value=3.8 Score=30.43 Aligned_cols=67 Identities=10% Similarity=0.025 Sum_probs=46.2
Q ss_pred CCCeEEEecCCcChHHHHHHhhCCCCe-EEEeec-hhHhhhCCC-CCCceEEEcccCc-c---CC---CCCEEEech
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKYPHIK-GINFDL-PHVIQHSPE-YPGVKHVGGDMFQ-S---VP---NGDAILIKW 87 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~~~~~-~~~~D~-~~~~~~a~~-~~~i~~~~~d~~~-~---~~---~~D~i~~~~ 87 (184)
...+++|+=||.|..+..+.+..-.+. +.++|. +.+.+..+. +++..+..+|+.+ . ++ ..|+++...
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggp 91 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGS 91 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecC
Confidence 456899999999999998888743333 578888 665543332 3666788889876 2 22 239987754
No 428
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=70.89 E-value=2.9 Score=28.24 Aligned_cols=13 Identities=15% Similarity=0.135 Sum_probs=6.2
Q ss_pred ChHHHHHHHHHHH
Q 030025 93 SDEHCLKLLKNCH 105 (184)
Q Consensus 93 ~~~~~~~~l~~~~ 105 (184)
..+.+..+++.+.
T Consensus 133 g~~lA~~Iv~~fL 145 (166)
T 3s5p_A 133 GPEVAASILSRFL 145 (166)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4444445555443
No 429
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=70.37 E-value=12 Score=27.41 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=47.4
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
..+|.=||+|. | .++..+++. +.++++.|. +...+...+. ++.....+..+-....|+|++.-. ++....
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-g~~~~~~~~~e~~~~aDvvi~~vp----~~~~~~ 79 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE-GACGAAASAREFAGVVDALVILVV----NAAQVR 79 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-TCSEEESSSTTTTTTCSEEEECCS----SHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc-CCccccCCHHHHHhcCCEEEEECC----CHHHHH
Confidence 46788887762 2 233333333 468889997 5555443332 222223333333344598887432 122333
Q ss_pred HHH---HHHHhhCCCCcEEEE
Q 030025 99 KLL---KNCHKSIPEGGKVIV 116 (184)
Q Consensus 99 ~~l---~~~~~~L~pgG~l~i 116 (184)
.++ +.+...++||..++-
T Consensus 80 ~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 80 QVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp HHHC--CCCGGGSCTTCEEEE
T ss_pred HHHhChhhHHhhCCCCCEEEe
Confidence 455 666778888876654
No 430
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=70.10 E-value=27 Score=26.37 Aligned_cols=79 Identities=16% Similarity=0.216 Sum_probs=51.9
Q ss_pred CCeEEEecCCcChHHHHHHhhCCC----CeEEEeechhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPH----IKGINFDLPHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~----~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
...|+=+|++.|.....|.+.++. .+.+.+|........+..++++++.. +. ++
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ff-------------------de-- 133 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FV-------------------DE-- 133 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CC-------------------CH--
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehh-hc-------------------CH--
Confidence 459999999999999999987764 79999997333233333344444422 11 12
Q ss_pred HHHHHHHHhhCCCCcEEEEEeeecCC
Q 030025 98 LKLLKNCHKSIPEGGKVIVVESVLPE 123 (184)
Q Consensus 98 ~~~l~~~~~~L~pgG~l~i~~~~~~~ 123 (184)
.-+++++..+.+...|+|+|.-..+
T Consensus 134 -~~i~~l~~~~~~~~vLfISDIRS~~ 158 (348)
T 1vpt_A 134 -EYLRSIKKQLHPSKIILISDVASAA 158 (348)
T ss_dssp -HHHHHHHHHHTTSCEEEEECCCC--
T ss_pred -HHHHHHHHHhcCCCEEEEEecccCC
Confidence 2466777777778888888865433
No 431
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=69.94 E-value=2.1 Score=32.26 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=43.2
Q ss_pred CCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHH
Q 030025 22 IKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLK 99 (184)
Q Consensus 22 ~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~ 99 (184)
.++|.=||.| .|......++.+ +.++++.|. +...+.+ .. .+...++.+-+..+|+|++...+- ++...
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~---~~-~~~~~~l~ell~~aDvV~l~lPlt----~~t~~ 207 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL-GMHVIGVNTTGHPADHF---HE-TVAFTATADALATANFIVNALPLT----PTTHH 207 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCCCCTTC---SE-EEEGGGCHHHHHHCSEEEECCCCC----GGGTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhC-CCEEEEECCCcchhHhH---hh-ccccCCHHHHHhhCCEEEEcCCCc----hHHHH
Confidence 4678888776 343333333444 679999986 3221111 11 111122222233459998754432 11112
Q ss_pred HH-HHHHhhCCCCcEEEE
Q 030025 100 LL-KNCHKSIPEGGKVIV 116 (184)
Q Consensus 100 ~l-~~~~~~L~pgG~l~i 116 (184)
++ ++....+|||..|+=
T Consensus 208 li~~~~l~~mk~gailIN 225 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLIN 225 (324)
T ss_dssp CBSHHHHHTCCSCCEEEE
T ss_pred hcCHHHHhcCCCCCEEEE
Confidence 22 456677899888763
No 432
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=69.93 E-value=6.8 Score=28.57 Aligned_cols=88 Identities=13% Similarity=0.161 Sum_probs=49.2
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------------------------CCceEEEcccC
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEY------------------------PGVKHVGGDMF 74 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------------------------~~i~~~~~d~~ 74 (184)
.++|.=||+|+ | .++..+++. +.+++..|. ++.++.+.+. .++.+ ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 35788888774 2 233333333 568899997 6555544321 11222 22322
Q ss_pred ccCCCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEE
Q 030025 75 QSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVI 115 (184)
Q Consensus 75 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 115 (184)
+...++|+|+..-.- ..+....+++++...++|+..++
T Consensus 81 ~~~~~aDlVi~av~~---~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 81 QAVKDADLVIEAVPE---SLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp HHTTTCSEEEECCCS---CHHHHHHHHHHHHHHSCTTCEEE
T ss_pred HHhccCCEEEEeccC---cHHHHHHHHHHHHhhCCCCcEEE
Confidence 224445988774321 11234578999999999987654
No 433
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=69.78 E-value=2.8 Score=28.40 Aligned_cols=11 Identities=18% Similarity=0.175 Sum_probs=6.2
Q ss_pred CCeEEEecCCc
Q 030025 22 IKQLVDVGGSL 32 (184)
Q Consensus 22 ~~~ilDiG~G~ 32 (184)
.-.|.|+|+-+
T Consensus 46 G~eV~D~G~~~ 56 (169)
T 3ph3_A 46 GYEVIDFGTHG 56 (169)
T ss_dssp TCEEEECCCCS
T ss_pred CCEEEEcCCCC
Confidence 35566666543
No 434
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.75 E-value=8.6 Score=27.27 Aligned_cols=63 Identities=10% Similarity=0.003 Sum_probs=37.8
Q ss_pred CCCeEEEecCCcChHHH--HHHhhCCCCeEEEeec---hhHhhhCCCCCCceEEEcccCc-cCCCCCEEEec
Q 030025 21 HIKQLVDVGGSLGNTLK--AITSKYPHIKGINFDL---PHVIQHSPEYPGVKHVGGDMFQ-SVPNGDAILIK 86 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~--~l~~~~~~~~~~~~D~---~~~~~~a~~~~~i~~~~~d~~~-~~~~~D~i~~~ 86 (184)
.+++||=||+|.-...+ .|++. +..++.++. +.+.+.+. ..++.++..++.. .+...|+|++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~-~~~i~~i~~~~~~~dL~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEA-KGQLRVKRKKVGEEDLLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHH-TTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHH-cCCcEEEECCCCHhHhCCCCEEEEC
Confidence 56899999998443332 23333 456677663 33333332 3568888777765 55555988874
No 435
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=69.64 E-value=8.9 Score=30.10 Aligned_cols=90 Identities=9% Similarity=0.055 Sum_probs=55.6
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEE---cccC-----------------c
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVG---GDMF-----------------Q 75 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~---~d~~-----------------~ 75 (184)
+++..+||=+|+ |.|..+..+++.. .++++.++. +.-++.+++..--..+. .|.. +
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHH
Confidence 678899999996 4678888888876 568787776 55555554431111111 1110 0
Q ss_pred ---c-CC-CC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 76 ---S-VP-NG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 76 ---~-~~-~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
. .+ .. |+|+-.. .. ..++.+.+.|+|||++++..
T Consensus 305 ~i~~~t~g~g~Dvvid~~-----G~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHP-----GR----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHTSCCEEEEEECS-----CH----HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHhCCCCCcEEEEcC-----Cc----hhHHHHHHHhhCCcEEEEEe
Confidence 0 11 23 7776422 22 35788889999999999854
No 436
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.26 E-value=17 Score=28.24 Aligned_cols=90 Identities=8% Similarity=-0.057 Sum_probs=56.0
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEE---ccc------------------C
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVG---GDM------------------F 74 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~---~d~------------------~ 74 (184)
+++..+||=.|+ |.|..+..+++.. ..+++.++. +.-++.+++..--..+. .|+ .
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHH
Confidence 778899999996 4677787788765 568888776 55555555442111111 111 0
Q ss_pred c----cCCCC-CEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 75 Q----SVPNG-DAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 75 ~----~~~~~-D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+ ..+.. |+++-... . ..++...+.|+|||++++..
T Consensus 297 ~~v~~~~g~g~Dvvid~~G-----~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHTG-----R----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHSSCCSEEEECSC-----H----HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHhCCCceEEEECCC-----c----hHHHHHHHHHhcCCEEEEEe
Confidence 0 01233 88765322 2 24778889999999999865
No 437
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=69.03 E-value=12 Score=28.35 Aligned_cols=92 Identities=9% Similarity=-0.017 Sum_probs=53.5
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcc---cCccC--CCC-CEEEechhhh
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGD---MFQSV--PNG-DAILIKWILH 90 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d---~~~~~--~~~-D~i~~~~~l~ 90 (184)
..+..+||=.| +|.|..+..+++.. ++++++++.+.-.+.+++..--..+..+ ..+.. ... |+++-...
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g-- 257 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG-- 257 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSC--
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCC--
Confidence 45678999998 34788888888776 4688877754444444433211112111 11111 123 88765322
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
.+. ..+....+.++|||+++...
T Consensus 258 ---~~~--~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 258 ---GST--ETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ---TTH--HHHGGGGBCSSSCCEEEESC
T ss_pred ---Chh--hhhHHHHHhhcCCcEEEEeC
Confidence 111 23677788999999998854
No 438
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=68.96 E-value=6.7 Score=29.55 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=48.2
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hh-HhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PH-VIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~-~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
..+|.=||+|. | .++..+.+. +.++++.|. +. ..+.+++. ++... |..+....+|+|++.- ++...
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~-G~~~~--~~~e~~~~aDvVilav-----p~~~~ 85 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH-GLKVA--DVKTAVAAADVVMILT-----PDEFQ 85 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT-TCEEE--CHHHHHHTCSEEEECS-----CHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC-CCEEc--cHHHHHhcCCEEEEeC-----CcHHH
Confidence 35788898874 2 333444333 356777775 32 23443322 34332 3322233459998844 33334
Q ss_pred HHHHH-HHHhhCCCCcEEEE
Q 030025 98 LKLLK-NCHKSIPEGGKVIV 116 (184)
Q Consensus 98 ~~~l~-~~~~~L~pgG~l~i 116 (184)
..+++ ++...++||..++.
T Consensus 86 ~~v~~~~i~~~l~~~~ivi~ 105 (338)
T 1np3_A 86 GRLYKEEIEPNLKKGATLAF 105 (338)
T ss_dssp HHHHHHHTGGGCCTTCEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEE
Confidence 57787 88888998876663
No 439
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=68.22 E-value=2.2 Score=30.14 Aligned_cols=9 Identities=33% Similarity=0.324 Sum_probs=5.1
Q ss_pred CeEEEecCC
Q 030025 23 KQLVDVGGS 31 (184)
Q Consensus 23 ~~ilDiG~G 31 (184)
-.|.|+|+-
T Consensus 34 ~eV~D~G~~ 42 (216)
T 2ppw_A 34 YQLFNYGMR 42 (216)
T ss_dssp CEEEECSCC
T ss_pred CEEEEeCCC
Confidence 456666653
No 440
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=68.06 E-value=3 Score=31.78 Aligned_cols=84 Identities=18% Similarity=0.054 Sum_probs=44.0
Q ss_pred CCeEEEecCCcChHHHHHHhh--CCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSK--YPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~--~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.++|.=||.| ..+..++++ .-+.++++.|. +...+.+. ++.+. .++.+-+..+|+|++...+- ++..
T Consensus 173 gktvGIIGlG--~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~---g~~~~-~~l~ell~~sDvV~l~~Plt----~~T~ 242 (345)
T 4g2n_A 173 GRRLGIFGMG--RIGRAIATRARGFGLAIHYHNRTRLSHALEE---GAIYH-DTLDSLLGASDIFLIAAPGR----PELK 242 (345)
T ss_dssp TCEEEEESCS--HHHHHHHHHHHTTTCEEEEECSSCCCHHHHT---TCEEC-SSHHHHHHTCSEEEECSCCC----GGGT
T ss_pred CCEEEEEEeC--hhHHHHHHHHHHCCCEEEEECCCCcchhhhc---CCeEe-CCHHHHHhhCCEEEEecCCC----HHHH
Confidence 4677778765 444444433 22579999996 32222211 33321 12222334459998855432 1222
Q ss_pred HHH-HHHHhhCCCCcEEE
Q 030025 99 KLL-KNCHKSIPEGGKVI 115 (184)
Q Consensus 99 ~~l-~~~~~~L~pgG~l~ 115 (184)
.++ ++....+|||..|+
T Consensus 243 ~li~~~~l~~mk~gailI 260 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVI 260 (345)
T ss_dssp TCBCHHHHHHSCTTEEEE
T ss_pred HHhCHHHHhhCCCCcEEE
Confidence 233 45667788887776
No 441
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=67.69 E-value=17 Score=26.12 Aligned_cols=83 Identities=8% Similarity=0.014 Sum_probs=43.6
Q ss_pred eEEEecCCc-Ch-HHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHHH
Q 030025 24 QLVDVGGSL-GN-TLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLKL 100 (184)
Q Consensus 24 ~ilDiG~G~-G~-~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~~ 100 (184)
+|.=||+|. |. ++..+++ +.+++..|. +...+...+. ++... +..+.....|+|+..-.- +.....+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-g~~~~--~~~~~~~~~D~vi~~v~~----~~~~~~v 72 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-FGSEA--VPLERVAEARVIFTCLPT----TREVYEV 72 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-HCCEE--CCGGGGGGCSEEEECCSS----HHHHHHH
T ss_pred eEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-CCccc--CHHHHHhCCCEEEEeCCC----hHHHHHH
Confidence 577788874 32 3333333 457788886 4444333221 22222 111223334988774331 1123457
Q ss_pred HHHHHhhCCCCcEEEE
Q 030025 101 LKNCHKSIPEGGKVIV 116 (184)
Q Consensus 101 l~~~~~~L~pgG~l~i 116 (184)
++++...++||..++.
T Consensus 73 ~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 73 AEALYPYLREGTYWVD 88 (289)
T ss_dssp HHHHTTTCCTTEEEEE
T ss_pred HHHHHhhCCCCCEEEE
Confidence 7888888888766554
No 442
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=67.58 E-value=2.5 Score=29.82 Aligned_cols=34 Identities=9% Similarity=-0.171 Sum_probs=13.6
Q ss_pred CCcChHHHHHHhhCCCCeEEEeechhHhhhCCCC
Q 030025 30 GSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEY 63 (184)
Q Consensus 30 ~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~ 63 (184)
||||.=..-.+.++|+++.-.+.-+...+.++++
T Consensus 74 CGTGiG~siaANKv~GIRAAlc~d~~sA~laR~h 107 (214)
T 3ono_A 74 CGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQI 107 (214)
T ss_dssp ESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHH
T ss_pred cCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHH
Confidence 4444333334444444444444323333344433
No 443
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=66.67 E-value=2.1 Score=28.46 Aligned_cols=9 Identities=22% Similarity=0.331 Sum_probs=4.9
Q ss_pred CCeEEEecC
Q 030025 22 IKQLVDVGG 30 (184)
Q Consensus 22 ~~~ilDiG~ 30 (184)
.-.|.|+|+
T Consensus 27 G~eV~D~G~ 35 (149)
T 2vvr_A 27 GVEVIDKGT 35 (149)
T ss_dssp TCEEEECCC
T ss_pred CCEEEEeCC
Confidence 345566655
No 444
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=66.66 E-value=3 Score=27.19 Aligned_cols=19 Identities=26% Similarity=0.308 Sum_probs=17.2
Q ss_pred HHHHHHHHhhCCCCcEEEE
Q 030025 98 LKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 98 ~~~l~~~~~~L~pgG~l~i 116 (184)
..++..+.+.|||||+|..
T Consensus 78 r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCCTTCCEEC
T ss_pred HHHHHHHHHHhCCCCEEEe
Confidence 3789999999999999886
No 445
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=66.64 E-value=2.7 Score=29.93 Aligned_cols=22 Identities=5% Similarity=-0.028 Sum_probs=11.6
Q ss_pred HHHHHHHhcCCCCCCeEEEecCCc
Q 030025 9 LQKILEAYKGFEHIKQLVDVGGSL 32 (184)
Q Consensus 9 ~~~l~~~~~~~~~~~~ilDiG~G~ 32 (184)
.+.+.+.+. +..-.|.|+|+-+
T Consensus 38 Ke~i~~~L~--~~G~eV~D~G~~s 59 (231)
T 3c5y_A 38 HEALTTVAE--PLGHKVFNYGMYT 59 (231)
T ss_dssp HHHHHHHHG--GGTCEEEECCCCS
T ss_pred HHHHHHHHH--HCCCEEEEeCCCC
Confidence 344444443 3445677777643
No 446
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=66.49 E-value=4 Score=27.93 Aligned_cols=25 Identities=12% Similarity=-0.026 Sum_probs=10.1
Q ss_pred HHhhCCCCeEEEeechhHhhhCCCC
Q 030025 39 ITSKYPHIKGINFDLPHVIQHSPEY 63 (184)
Q Consensus 39 l~~~~~~~~~~~~D~~~~~~~a~~~ 63 (184)
.+.++|.++...+--+...+.+|+.
T Consensus 98 aANKv~GIRAAlc~d~~sA~laR~H 122 (179)
T 3k7p_A 98 AANKVPGVRAALCHDHYTAAMSRIH 122 (179)
T ss_dssp HHHTSTTCCEEECCSHHHHHHHHHT
T ss_pred HhhcCCCeEEEEeCCHHHHHHHHHh
Confidence 3344444444443323333344433
No 447
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=66.39 E-value=18 Score=28.49 Aligned_cols=92 Identities=15% Similarity=0.121 Sum_probs=46.3
Q ss_pred CeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCC------CC-------------ceEEEcccCccCCCC
Q 030025 23 KQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEY------PG-------------VKHVGGDMFQSVPNG 80 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~------~~-------------i~~~~~d~~~~~~~~ 80 (184)
++|.=||+| +....++..+ .+.+++++|. +..++..++. +. +.+ ..|..+....+
T Consensus 3 mkI~VIG~G--~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIG--YVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHGGGC
T ss_pred CEEEEECcC--HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHHhcC
Confidence 467778775 3333333321 2468999998 5544433221 11 111 12222123344
Q ss_pred CEEEechhhhc-----CChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 81 DAILIKWILHD-----WSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 81 D~i~~~~~l~~-----~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
|+|++.-.-.. ..-.....+++.+.+.|+||-.++..
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ 121 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTK 121 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEe
Confidence 88876432110 00013457788999999887555443
No 448
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=66.25 E-value=16 Score=25.03 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=67.6
Q ss_pred CeEEEecCCcChHHHHHHhhC---CCCeEEEeec-hh-HhhhC-CCCCCceEEEcccCcc--C----CCCCEEEechhhh
Q 030025 23 KQLVDVGGSLGNTLKAITSKY---PHIKGINFDL-PH-VIQHS-PEYPGVKHVGGDMFQS--V----PNGDAILIKWILH 90 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~---~~~~~~~~D~-~~-~~~~a-~~~~~i~~~~~d~~~~--~----~~~D~i~~~~~l~ 90 (184)
++||=.| |+|.+...+++.+ .+.+++.++. +. -++.. ....++.++.+|+.++ + ...|+++.+....
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 3477776 4455555544432 3578888886 43 32221 1346899999999872 2 2238888765432
Q ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEeeecCCCCCCCccccchhhhhhHhhhhCCC-ccccCHHHHHHHHHHcCCceeE
Q 030025 91 DWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPELPENGTHSKINSLADVLVMTQYPG-GKERTKHEFTTLATEAGFSGIR 169 (184)
Q Consensus 91 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~aGf~~i~ 169 (184)
.+ +...+++.+.+. ..|+++........... +. ....... . ... ....+......++++.|+...-
T Consensus 85 n~---~~~~~~~~~~~~--~~~~iv~iSs~~~~~~~-~~-----~~~~~~~-~-~~~~~y~~~K~~~e~~~~~~~i~~~~ 151 (221)
T 3r6d_A 85 GS---DMASIVKALSRX--NIRRVIGVSMAGLSGEF-PV-----ALEKWTF-D-NLPISYVQGERQARNVLRESNLNYTI 151 (221)
T ss_dssp HH---HHHHHHHHHHHT--TCCEEEEEEETTTTSCS-CH-----HHHHHHH-H-TSCHHHHHHHHHHHHHHHHSCSEEEE
T ss_pred Ch---hHHHHHHHHHhc--CCCeEEEEeeceecCCC-Cc-----ccccccc-c-ccccHHHHHHHHHHHHHHhCCCCEEE
Confidence 21 133455544432 23567665543322110 00 0000000 0 000 1112456677788888877655
Q ss_pred EEe
Q 030025 170 FVC 172 (184)
Q Consensus 170 ~~~ 172 (184)
+.+
T Consensus 152 vrp 154 (221)
T 3r6d_A 152 LRL 154 (221)
T ss_dssp EEE
T ss_pred Eec
Confidence 444
No 449
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=66.25 E-value=23 Score=27.83 Aligned_cols=93 Identities=10% Similarity=0.130 Sum_probs=48.2
Q ss_pred CCeEEEecCCcChHHHHHHhhC-CCCeEEEeec-hhHhhhCCCC--C---------------CceEEEcccCccCCCCCE
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY-PHIKGINFDL-PHVIQHSPEY--P---------------GVKHVGGDMFQSVPNGDA 82 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~--~---------------~i~~~~~d~~~~~~~~D~ 82 (184)
.++|.=||+|. ....++..+ .+.+++++|. ++.++..++. + ++.+ ..|..+....+|+
T Consensus 36 ~mkIaVIGlG~--mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~~~aDv 112 (432)
T 3pid_A 36 FMKITISGTGY--VGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAYRNADY 112 (432)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHTTCSE
T ss_pred CCEEEEECcCH--HHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHHhCCCE
Confidence 45788887763 333332221 1578999998 6655544331 0 1211 1222222334588
Q ss_pred EEechhhhc------CChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 83 ILIKWILHD------WSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 83 i~~~~~l~~------~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|++.-.-.. ..-.....+++.+.+ |+||..++...
T Consensus 113 ViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S 153 (432)
T 3pid_A 113 VIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS 153 (432)
T ss_dssp EEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS
T ss_pred EEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC
Confidence 877422110 000134467788888 89887776543
No 450
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=66.21 E-value=37 Score=25.10 Aligned_cols=87 Identities=8% Similarity=0.081 Sum_probs=47.4
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
..+|.=||+|. | .++..+++. +.++++.|. +...+...+. ++... .+..+-....|+|++.-. .+....
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-g~~~~-~~~~e~~~~aDvVi~~vp----~~~~~~ 102 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-GATIH-EQARAAARDADIVVSMLE----NGAVVQ 102 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-TCEEE-SSHHHHHTTCSEEEECCS----SHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-CCEee-CCHHHHHhcCCEEEEECC----CHHHHH
Confidence 45899998873 3 233333333 468888997 5555443332 33321 222222334598887432 123334
Q ss_pred HHHH--HHHhhCCCCcEEEE
Q 030025 99 KLLK--NCHKSIPEGGKVIV 116 (184)
Q Consensus 99 ~~l~--~~~~~L~pgG~l~i 116 (184)
.++. .+...++||..++-
T Consensus 103 ~v~~~~~~~~~l~~~~~vi~ 122 (320)
T 4dll_A 103 DVLFAQGVAAAMKPGSLFLD 122 (320)
T ss_dssp HHHTTTCHHHHCCTTCEEEE
T ss_pred HHHcchhHHhhCCCCCEEEe
Confidence 5565 67778888866554
No 451
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=66.20 E-value=6.7 Score=29.46 Aligned_cols=93 Identities=11% Similarity=0.136 Sum_probs=57.8
Q ss_pred HHhcCCCCCCeEEEecC--CcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEEcccCc---c-----CCCC-CE
Q 030025 14 EAYKGFEHIKQLVDVGG--SLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVGGDMFQ---S-----VPNG-DA 82 (184)
Q Consensus 14 ~~~~~~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~~d~~~---~-----~~~~-D~ 82 (184)
+... +++..+||-+|+ |.|..+..+++.. +++++++..+.-++.+++. +...+. +..+ . .+.. |+
T Consensus 144 ~~~~-~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~l-Ga~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 144 DRAQ-VQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFATARGSDLEYVRDL-GATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TTTC-CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECHHHHHHHHHH-TSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred HhcC-CCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCHHHHHHHHHc-CCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 3344 778899999993 4688888888875 5688888335555555543 233322 1111 0 1123 77
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
++-.. .. ..+..+.+.|+|+|++++...
T Consensus 220 vid~~-----g~----~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 220 VYDTL-----GG----PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EEESS-----CT----HHHHHHHHHEEEEEEEEESCC
T ss_pred EEECC-----Cc----HHHHHHHHHHhcCCeEEEEcc
Confidence 76532 22 357888899999999998543
No 452
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=66.05 E-value=19 Score=21.61 Aligned_cols=63 Identities=16% Similarity=0.022 Sum_probs=38.7
Q ss_pred CCeEEEecCCcChHHHHHHhh---CCCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc------CCCCCEEEech
Q 030025 22 IKQLVDVGGSLGNTLKAITSK---YPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS------VPNGDAILIKW 87 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~---~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~------~~~~D~i~~~~ 87 (184)
.++|+=+|+ |..+..+++. ....+++.+|. +.-.+... ..++.+...|..+. +...|+|+...
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 467899988 5555555443 33267888887 54444333 35677888887751 22338887754
No 453
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=65.67 E-value=15 Score=27.37 Aligned_cols=88 Identities=20% Similarity=0.209 Sum_probs=46.9
Q ss_pred CeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceE-------------EEcccCccCCCCCEEEec
Q 030025 23 KQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKH-------------VGGDMFQSVPNGDAILIK 86 (184)
Q Consensus 23 ~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~-------------~~~d~~~~~~~~D~i~~~ 86 (184)
.+|.=||+|. | .++..+++. +.+++.+|. +...+..++...+.+ ...|..+.....|+|++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5788898874 3 233333332 457888887 544443322111111 111111112334988775
Q ss_pred hhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 87 WILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 87 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
-.-. ....+++.+...++||..++..
T Consensus 83 v~~~-----~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 83 VPAI-----HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp SCGG-----GHHHHHHHHGGGCCTTCEEEES
T ss_pred CCch-----HHHHHHHHHHHhCCCCCEEEEc
Confidence 4333 2246789999999988765543
No 454
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=65.60 E-value=36 Score=24.67 Aligned_cols=87 Identities=14% Similarity=0.011 Sum_probs=47.2
Q ss_pred CeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEE--------c---ccCccCC---CCCEEEe
Q 030025 23 KQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVG--------G---DMFQSVP---NGDAILI 85 (184)
Q Consensus 23 ~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~--------~---d~~~~~~---~~D~i~~ 85 (184)
.+|.=||+|. | .++..+++. +.+++.+|. ++..+..++. ++.... . +..+... ..|+|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 4788898863 3 233333332 457888887 5444433221 222111 0 1111112 3488877
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
.-. +.....+++.+...++|+..++..
T Consensus 81 ~v~-----~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LTK-----AQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSC-----HHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred Eec-----cccHHHHHHHHHHhcCCCCEEEEe
Confidence 443 234457889999999988766654
No 455
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=65.60 E-value=48 Score=26.11 Aligned_cols=89 Identities=8% Similarity=0.068 Sum_probs=49.7
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCC-------------------CCC-ceEEEcccCccCC
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPE-------------------YPG-VKHVGGDMFQSVP 78 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-------------------~~~-i~~~~~d~~~~~~ 78 (184)
..+|.=||+|. | .++..+++. +..++.+|. ++.++.+++ ... ..-+..|. +...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~ 113 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELS 113 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGT
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHC
Confidence 35789999886 3 334444433 568899997 554443321 011 11123333 2344
Q ss_pred CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 79 NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 79 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
++|+|+..-. . ..+-...+++++...++|+..++.
T Consensus 114 ~aDlVIeaVp-e--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 114 TVDLVVEAVF-E--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TCSEEEECCC-S--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEcCC-C--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 4598877442 1 111234788999999988876553
No 456
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=65.18 E-value=3.9 Score=35.91 Aligned_cols=100 Identities=12% Similarity=0.020 Sum_probs=59.5
Q ss_pred CCCCCeEEEecCCcChHHHHHHhhCCCCeEEEeechhHhhhCCC-CCCceEEEcccCcc-C--CC-CCEEEechhhhcCC
Q 030025 19 FEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQHSPE-YPGVKHVGGDMFQS-V--PN-GDAILIKWILHDWS 93 (184)
Q Consensus 19 ~~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-~~~i~~~~~d~~~~-~--~~-~D~i~~~~~l~~~~ 93 (184)
.....++||+|.|--.-... -.-+...++.+|.....+...- .+...|++.|+..+ + .. +|++.|.++|..-.
T Consensus 819 ~~~~~~~lDlGTGPE~RiLs--LiP~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~ 896 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILE--LIPATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAA 896 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGG--TSCTTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHH
T ss_pred ecccceEEEccCCCcceeee--ecCCCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhh
Confidence 45678999998776543322 2224678999998433333333 25699999999872 2 22 39999977766421
Q ss_pred ---hHHHHHHHHHHHhhCCCC-cEEEEEeee
Q 030025 94 ---DEHCLKLLKNCHKSIPEG-GKVIVVESV 120 (184)
Q Consensus 94 ---~~~~~~~l~~~~~~L~pg-G~l~i~~~~ 120 (184)
.-...+.++++.+.+++. ..-++...+
T Consensus 897 A~a~~tl~~~~~q~l~~~~~~~~~~l~lQlN 927 (1289)
T 1ej6_A 897 AGKSMTFDAAFQQLIKVLSKSTANVVLVQVN 927 (1289)
T ss_dssp HHHTCCHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred hccCCcHHHHHHHHHHHHHhcCccEEEEEec
Confidence 111235566666666544 444444333
No 457
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=65.16 E-value=21 Score=30.15 Aligned_cols=94 Identities=11% Similarity=0.022 Sum_probs=58.7
Q ss_pred CCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC-------------------CCceEEEcccCccCCCCC
Q 030025 22 IKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY-------------------PGVKHVGGDMFQSVPNGD 81 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------------------~~i~~~~~d~~~~~~~~D 81 (184)
.++|-=||+|+=....+..-...+..++..|. ++.++.+++. ........+..+.+.+.|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD 395 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVD 395 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCS
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCC
Confidence 47899999998655555555556889999998 6666554331 001111111122344448
Q ss_pred EEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 82 AILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 82 ~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+|+= .+++.+. -..++|+++-+.++|+..|.-.+
T Consensus 396 lVIE-AV~E~l~--iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 396 LVVE-AVFEDMN--LKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp EEEE-CCCSCHH--HHHHHHHHHHHHSCTTCEEEECC
T ss_pred EEEE-eccccHH--HHHHHHHHHhhcCCCCceEEecC
Confidence 7664 4555443 34589999999999998766544
No 458
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=64.88 E-value=21 Score=27.07 Aligned_cols=81 Identities=9% Similarity=0.003 Sum_probs=40.5
Q ss_pred CCeEEEecCCcChHHHHHHhh--CCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSK--YPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~--~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.++|.=||.| ..+..++++ .-+.++++.|. +.. ...... ..+..+-+..+|+|++...+ .++..
T Consensus 171 gktiGIIGlG--~IG~~vA~~l~~~G~~V~~~dr~~~~------~~~~~~-~~sl~ell~~aDvVil~vP~----t~~t~ 237 (340)
T 4dgs_A 171 GKRIGVLGLG--QIGRALASRAEAFGMSVRYWNRSTLS------GVDWIA-HQSPVDLARDSDVLAVCVAA----SAATQ 237 (340)
T ss_dssp TCEEEEECCS--HHHHHHHHHHHTTTCEEEEECSSCCT------TSCCEE-CSSHHHHHHTCSEEEECC-----------
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCEEEEEcCCccc------ccCcee-cCCHHHHHhcCCEEEEeCCC----CHHHH
Confidence 4678888775 444444433 22578898885 221 111211 11222223445999884443 23334
Q ss_pred HHH-HHHHhhCCCCcEEE
Q 030025 99 KLL-KNCHKSIPEGGKVI 115 (184)
Q Consensus 99 ~~l-~~~~~~L~pgG~l~ 115 (184)
.++ ++....+|||..++
T Consensus 238 ~li~~~~l~~mk~gailI 255 (340)
T 4dgs_A 238 NIVDASLLQALGPEGIVV 255 (340)
T ss_dssp ---CHHHHHHTTTTCEEE
T ss_pred HHhhHHHHhcCCCCCEEE
Confidence 455 67778899998776
No 459
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=64.81 E-value=53 Score=26.33 Aligned_cols=67 Identities=9% Similarity=-0.007 Sum_probs=39.1
Q ss_pred CCeEEEec-CCcChHH-HHHHhhCCCCeEEEeec-h--hHhhhCCCCCCceEEEcccCccCC-CCCEEEechhhh
Q 030025 22 IKQLVDVG-GSLGNTL-KAITSKYPHIKGINFDL-P--HVIQHSPEYPGVKHVGGDMFQSVP-NGDAILIKWILH 90 (184)
Q Consensus 22 ~~~ilDiG-~G~G~~~-~~l~~~~~~~~~~~~D~-~--~~~~~a~~~~~i~~~~~d~~~~~~-~~D~i~~~~~l~ 90 (184)
.++|.=|| ||+|..+ ..++.. .+.++++.|. + .+.+..++ .++.+..+.....+. ..|+|+.+..+-
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~-~G~~V~~sD~~~~~~~~~~L~~-~gi~~~~G~~~~~~~~~~d~vV~Spgi~ 91 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARA-LGHTVTGSDANIYPPMSTQLEQ-AGVTIEEGYLIAHLQPAPDLVVVGNAMK 91 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCCCTTHHHHHHH-TTCEEEESCCGGGGCSCCSEEEECTTCC
T ss_pred CCEEEEEEecHhhHHHHHHHHHh-CCCEEEEECCCCCcHHHHHHHH-CCCEEECCCCHHHcCCCCCEEEECCCcC
Confidence 47788888 6677543 222332 3679999996 2 22222221 367777664333343 349998877664
No 460
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=64.71 E-value=3 Score=30.88 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 96 HCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 96 ~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+....|..+.++|+|||+|++.+..
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecC
Confidence 4457889999999999999997753
No 461
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=64.48 E-value=21 Score=28.30 Aligned_cols=99 Identities=11% Similarity=0.015 Sum_probs=53.1
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEe
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILI 85 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~ 85 (184)
+...+.......-..++|+=+|+|. |......++.+ ++++++.|. +.....+. ..++.+. ++.+-+..+|+|+.
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-Ga~Viv~d~dp~~a~~A~-~~G~~vv--~LeElL~~ADIVv~ 308 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-GARVKVTEVDPICALQAA-MDGFEVV--TLDDAASTADIVVT 308 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHH-HTTCEEC--CHHHHGGGCSEEEE
T ss_pred HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCCcchhhHHH-hcCceec--cHHHHHhhCCEEEE
Confidence 3444555544233678899888773 44444444444 679999987 43222221 1233332 33233445599876
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
..--.++ +-++..+.+|||+.|+-.
T Consensus 309 atgt~~l-------I~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 309 TTGNKDV-------ITIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp CCSSSSS-------BCHHHHHHSCTTEEEEEC
T ss_pred CCCCccc-------cCHHHHhcCCCCeEEEEc
Confidence 3211221 124566778999887754
No 462
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=63.83 E-value=6.2 Score=29.36 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=53.4
Q ss_pred CCCCC-eEEEecC--CcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc-c----cCccC-CCC-CEEEech
Q 030025 19 FEHIK-QLVDVGG--SLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG-D----MFQSV-PNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~-~ilDiG~--G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~-d----~~~~~-~~~-D~i~~~~ 87 (184)
+.+.. +||-.|+ |.|..+..+++.. +.++++++. ++-++.+++..--..+.. + ..... +.. |+++-..
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~ 225 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPV 225 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECC
Confidence 55554 8999996 4777787787765 467888876 444444443211111111 1 11111 123 7765432
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.. ..+....+.++|||++++...
T Consensus 226 -----g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 226 -----GG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp -----CT----HHHHHHHTTEEEEEEEEECCC
T ss_pred -----cH----HHHHHHHHhhcCCCEEEEEec
Confidence 22 247888999999999988653
No 463
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=63.45 E-value=4.9 Score=27.61 Aligned_cols=8 Identities=38% Similarity=0.663 Sum_probs=5.1
Q ss_pred eEEEecCC
Q 030025 24 QLVDVGGS 31 (184)
Q Consensus 24 ~ilDiG~G 31 (184)
.|.|+|+-
T Consensus 59 eV~D~G~~ 66 (184)
T 3sgw_A 59 SITDVGVT 66 (184)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCC
Confidence 56676664
No 464
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=62.82 E-value=3.2 Score=31.58 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEeee
Q 030025 96 HCLKLLKNCHKSIPEGGKVIVVESV 120 (184)
Q Consensus 96 ~~~~~l~~~~~~L~pgG~l~i~~~~ 120 (184)
+....|..+.++|+|||+|++....
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecC
Confidence 4457788999999999999998764
No 465
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=62.56 E-value=6.5 Score=29.44 Aligned_cols=83 Identities=12% Similarity=0.202 Sum_probs=43.6
Q ss_pred CCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEc--ccCccCCCCCEEEechhhhcCChHHH
Q 030025 22 IKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGG--DMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 22 ~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~--d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
.++|.=||.| .|......++.+ +.++++.|. +.. .+.+.-... ++.+-+..+|+|++...+. ++.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~dr~~~~------~~~~~~~~~~~~l~ell~~aDiV~l~~Plt----~~t 207 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW-GFPLRCWSRSRKS------WPGVESYVGREELRAFLNQTRVLINLLPNT----AQT 207 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT-TCCEEEEESSCCC------CTTCEEEESHHHHHHHHHTCSEEEECCCCC----GGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEcCCchh------hhhhhhhcccCCHHHHHhhCCEEEEecCCc----hhh
Confidence 5778888776 343333333334 578999986 321 122322211 2222234459998854432 222
Q ss_pred HHHH-HHHHhhCCCCcEEE
Q 030025 98 LKLL-KNCHKSIPEGGKVI 115 (184)
Q Consensus 98 ~~~l-~~~~~~L~pgG~l~ 115 (184)
..++ ++....+|||..|+
T Consensus 208 ~~li~~~~l~~mk~gailI 226 (315)
T 3pp8_A 208 VGIINSELLDQLPDGAYVL 226 (315)
T ss_dssp TTCBSHHHHTTSCTTEEEE
T ss_pred hhhccHHHHhhCCCCCEEE
Confidence 2344 55677888887765
No 466
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=62.30 E-value=26 Score=21.86 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=47.0
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc-------CCCCCEEEechhhhc
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS-------VPNGDAILIKWILHD 91 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~-------~~~~D~i~~~~~l~~ 91 (184)
.++|+=+|+ |..+..+++.. .+.+++.+|. +...+.+++. ...++.+|..++ ....|+|+....-
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~-- 80 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGA-- 80 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS--
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC--
Confidence 357898987 55555555442 2457788887 5555554433 456677776541 1223888764321
Q ss_pred CChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 92 WSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 92 ~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
+.+....+....+.+.|. +++.
T Consensus 81 --~~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 81 --NIQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp --CHHHHHHHHHHHHHTTCS-EEEE
T ss_pred --chHHHHHHHHHHHHcCCC-eEEE
Confidence 112122344455556775 5554
No 467
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=62.21 E-value=5.1 Score=25.81 Aligned_cols=83 Identities=17% Similarity=0.163 Sum_probs=43.8
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhh-CCCCCCceEEEcccC-ccCCCCCEEEechhhhcCChHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQH-SPEYPGVKHVGGDMF-QSVPNGDAILIKWILHDWSDEH 96 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~-a~~~~~i~~~~~d~~-~~~~~~D~i~~~~~l~~~~~~~ 96 (184)
.++|+=||+ |..+..+++.. .+.+++..|. ++-.+. +++.. +.....+-. +.....|+|+......+.
T Consensus 21 ~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~Divi~at~~~~~---- 93 (144)
T 3oj0_A 21 GNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-YEYVLINDIDSLIKNNDVIITATSSKTP---- 93 (144)
T ss_dssp CCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-CEEEECSCHHHHHHTCSEEEECSCCSSC----
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-CceEeecCHHHHhcCCCEEEEeCCCCCc----
Confidence 689999997 66666666653 3456777776 433322 22222 333222211 122344988876544321
Q ss_pred HHHHHHHHHhhCCCCcEEEE
Q 030025 97 CLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 97 ~~~~l~~~~~~L~pgG~l~i 116 (184)
++. ...++||+.++-
T Consensus 94 ---~~~--~~~l~~g~~vid 108 (144)
T 3oj0_A 94 ---IVE--ERSLMPGKLFID 108 (144)
T ss_dssp ---SBC--GGGCCTTCEEEE
T ss_pred ---Eee--HHHcCCCCEEEE
Confidence 111 256788776543
No 468
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=62.17 E-value=5.7 Score=29.87 Aligned_cols=96 Identities=13% Similarity=0.068 Sum_probs=52.9
Q ss_pred CCCCeEEEecCCcChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC------------------------CCceEEEcccC
Q 030025 20 EHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY------------------------PGVKHVGGDMF 74 (184)
Q Consensus 20 ~~~~~ilDiG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------------------------~~i~~~~~d~~ 74 (184)
+...+|.=||+|+=....+..-...+..++..|. ++.++.+.++ .++.+ ..|+.
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 3467899999985333322222233678899997 6665544321 01221 12222
Q ss_pred ccCCCCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 75 QSVPNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 75 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
+.+.++|+|+ ..+.+.+. -..++|+++-+.++|+-.|.-.+.
T Consensus 83 ~a~~~ad~Vi-Eav~E~l~--iK~~lf~~l~~~~~~~aIlaSNTS 124 (319)
T 3ado_A 83 EAVEGVVHIQ-ECVPENLD--LKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHTTTEEEEE-ECCCSCHH--HHHHHHHHHHTTCCSSSEEEECCS
T ss_pred hHhccCcEEe-eccccHHH--HHHHHHHHHHHHhhhcceeehhhh
Confidence 2232335543 44555443 345899999999999977665443
No 469
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=62.13 E-value=3.5 Score=31.41 Aligned_cols=94 Identities=12% Similarity=0.144 Sum_probs=49.0
Q ss_pred CCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCC--CCceEEEcc---cCccCCCCCEEEechhhhcCCh
Q 030025 22 IKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEY--PGVKHVGGD---MFQSVPNGDAILIKWILHDWSD 94 (184)
Q Consensus 22 ~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--~~i~~~~~d---~~~~~~~~D~i~~~~~l~~~~~ 94 (184)
..+|+=+|+| .|.....+++.. +++++.+|. +.-++.+++. ..+.....+ +.+.....|+|+.......-..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 3899999985 444444555555 458999997 5544443322 122222111 1112223498876443321110
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 95 EHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 95 ~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
+. -+.+...+.++|||.++-..
T Consensus 246 ~~--li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 246 PI--LVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CC--CBCHHHHTTSCTTCEEEETT
T ss_pred Ce--ecCHHHHhhCCCCCEEEEEe
Confidence 10 12344567889999877644
No 470
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=62.00 E-value=2.4 Score=31.64 Aligned_cols=86 Identities=17% Similarity=0.138 Sum_probs=44.7
Q ss_pred CCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
..++|.=||+| ..+..+++.. -+.++++.|. +.. +.+.+ .++.+. +..+-+..+|+|++...+. ++.
T Consensus 141 ~g~~vgIiG~G--~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~~--~l~ell~~aDvV~l~~p~~----~~t 210 (307)
T 1wwk_A 141 EGKTIGIIGFG--RIGYQVAKIANALGMNILLYDPYPNE-ERAKE-VNGKFV--DLETLLKESDVVTIHVPLV----EST 210 (307)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSSCCH-HHHHH-TTCEEC--CHHHHHHHCSEEEECCCCS----TTT
T ss_pred CCceEEEEccC--HHHHHHHHHHHHCCCEEEEECCCCCh-hhHhh-cCcccc--CHHHHHhhCCEEEEecCCC----hHH
Confidence 34678888765 4444444331 2578999996 332 22211 133321 3222233459988854432 111
Q ss_pred HHHH-HHHHhhCCCCcEEEE
Q 030025 98 LKLL-KNCHKSIPEGGKVIV 116 (184)
Q Consensus 98 ~~~l-~~~~~~L~pgG~l~i 116 (184)
..++ ++....+|||+.++-
T Consensus 211 ~~li~~~~l~~mk~ga~lin 230 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILIN 230 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEE
T ss_pred hhhcCHHHHhcCCCCeEEEE
Confidence 2233 345567899988764
No 471
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=61.99 E-value=2.7 Score=27.88 Aligned_cols=57 Identities=5% Similarity=0.001 Sum_probs=26.3
Q ss_pred HHHHHHhcCCCCCCeEEEecCCcC-------hHHHHHHhhCC-CCeEEEee-c-hhHhhhCCCCCCceE
Q 030025 10 QKILEAYKGFEHIKQLVDVGGSLG-------NTLKAITSKYP-HIKGINFD-L-PHVIQHSPEYPGVKH 68 (184)
Q Consensus 10 ~~l~~~~~~~~~~~~ilDiG~G~G-------~~~~~l~~~~~-~~~~~~~D-~-~~~~~~a~~~~~i~~ 68 (184)
+.+.+++. +..-.|.|+|+-+. .++..+++... .-+++.+. . -.+.-.|.+.+++..
T Consensus 23 ~~i~~~L~--~~G~eV~D~G~~~~~~~~dYpd~a~~va~~V~~~d~GIliCGTGiG~siaANKv~GIRA 89 (148)
T 4em8_A 23 LFLSAYLR--DLGCEVFDCGCDPKEHSVDYPDYVHDVVREVSDTSFGVLICGTGIGMSIAANRHKNIRA 89 (148)
T ss_dssp HHHHHHHH--HTTCEEEECCCCTTCSCCCGGGGTHHHHTTCBTTBEEEEEESSSHHHHHHHTTSTTCCE
T ss_pred HHHHHHHH--HCCCEEEEeCCCCCCCCCChHHHHHHHHHHHHHhCeEEEEccCcHHHHHHHhcCCCeEE
Confidence 33444443 33456777776432 24444444421 12333333 2 344445566666544
No 472
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=61.81 E-value=28 Score=25.32 Aligned_cols=86 Identities=17% Similarity=0.153 Sum_probs=46.2
Q ss_pred CeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHH
Q 030025 23 KQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLK 99 (184)
Q Consensus 23 ~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~ 99 (184)
.+|.=||+|. | .++..+++. +.++++.|. +...+...+. ++.. ..+..+.....|+|++.-. .+.....
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-g~~~-~~~~~~~~~~aDvvi~~vp----~~~~~~~ 75 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-GASA-ARSARDAVQGADVVISMLP----ASQHVEG 75 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-TCEE-CSSHHHHHTTCSEEEECCS----CHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-CCeE-cCCHHHHHhCCCeEEEECC----CHHHHHH
Confidence 5788888874 3 334444443 458888887 5554443322 2321 1122122334598877432 1223345
Q ss_pred HHH---HHHhhCCCCcEEEE
Q 030025 100 LLK---NCHKSIPEGGKVIV 116 (184)
Q Consensus 100 ~l~---~~~~~L~pgG~l~i 116 (184)
++. ++...++||..++-
T Consensus 76 v~~~~~~~~~~l~~~~~vi~ 95 (302)
T 2h78_A 76 LYLDDDGLLAHIAPGTLVLE 95 (302)
T ss_dssp HHHSSSCGGGSSCSSCEEEE
T ss_pred HHcCchhHHhcCCCCcEEEE
Confidence 666 67778888765543
No 473
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=61.20 E-value=3.5 Score=31.13 Aligned_cols=85 Identities=13% Similarity=0.060 Sum_probs=44.2
Q ss_pred CCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
..++|.=||.| ..+..++++. -+.++++.|. +... +.+ .+.+ .+..+-+..+|+|++...+. ++.
T Consensus 144 ~g~~vgIiG~G--~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~--~~~~--~~l~ell~~aDvV~~~~P~~----~~t 211 (333)
T 1dxy_A 144 GQQTVGVMGTG--HIGQVAIKLFKGFGAKVIAYDPYPMKG--DHP--DFDY--VSLEDLFKQSDVIDLHVPGI----EQN 211 (333)
T ss_dssp GGSEEEEECCS--HHHHHHHHHHHHTTCEEEEECSSCCSS--CCT--TCEE--CCHHHHHHHCSEEEECCCCC----GGG
T ss_pred CCCEEEEECcC--HHHHHHHHHHHHCCCEEEEECCCcchh--hHh--cccc--CCHHHHHhcCCEEEEcCCCc----hhH
Confidence 34678888765 4444444331 2578999996 3211 111 1222 12222233459998854432 122
Q ss_pred HHHH-HHHHhhCCCCcEEEEE
Q 030025 98 LKLL-KNCHKSIPEGGKVIVV 117 (184)
Q Consensus 98 ~~~l-~~~~~~L~pgG~l~i~ 117 (184)
..++ ++....||||+.|+-.
T Consensus 212 ~~li~~~~l~~mk~ga~lIn~ 232 (333)
T 1dxy_A 212 THIINEAAFNLMKPGAIVINT 232 (333)
T ss_dssp TTSBCHHHHHHSCTTEEEEEC
T ss_pred HHHhCHHHHhhCCCCcEEEEC
Confidence 2333 4466779998877643
No 474
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=60.35 E-value=4.2 Score=31.09 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=47.5
Q ss_pred CCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCc--c----CCCCCEEEechhhhcCC
Q 030025 22 IKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ--S----VPNGDAILIKWILHDWS 93 (184)
Q Consensus 22 ~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~--~----~~~~D~i~~~~~l~~~~ 93 (184)
.++|+=+|+| .|.....++... +.+++.+|. +.-++.+++.-...+ ..|..+ . ....|+|+........
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~~~-~~~~~~~~~l~~~~~~~DvVi~~~g~~~~- 242 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGGRV-ITLTATEANIKKSVQHADLLIGAVLVPGA- 242 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSE-EEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCceE-EEecCCHHHHHHHHhCCCEEEECCCCCcc-
Confidence 4889999985 344344444444 468999997 554443332111121 122211 1 2223988764332210
Q ss_pred hHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 94 DEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 94 ~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
....-+.++..+.++|||.++...
T Consensus 243 -~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 -KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC
T ss_pred -ccchhHHHHHHHhhcCCCEEEEEe
Confidence 000112466778889999887654
No 475
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=60.27 E-value=26 Score=27.51 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=14.1
Q ss_pred HHHHHHHHHhhCCCCcEEEE
Q 030025 97 CLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 97 ~~~~l~~~~~~L~pgG~l~i 116 (184)
.....+.+.+.|+||..++.
T Consensus 108 V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 108 VMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp HHHHHHHHGGGCCTTEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEE
Confidence 34567888889998765554
No 476
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=59.97 E-value=10 Score=30.05 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=56.0
Q ss_pred HHHHHHHhcC-CCCCCeEEEecCC-cChHHHHHHhhCCCCeEEEeec--hhHhhhCCCCCCceEEEcccCc-c-C-----
Q 030025 9 LQKILEAYKG-FEHIKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL--PHVIQHSPEYPGVKHVGGDMFQ-S-V----- 77 (184)
Q Consensus 9 ~~~l~~~~~~-~~~~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~--~~~~~~a~~~~~i~~~~~d~~~-~-~----- 77 (184)
.+++.+.+.. -.+.++|+=+|+| .|..+...++. ...+..++. ..+...+++.+++.++++|..+ . +
T Consensus 221 i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i 298 (461)
T 4g65_A 221 IRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENI 298 (461)
T ss_dssp HHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTG
T ss_pred HHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCc
Confidence 4455555541 2346789988877 34433333333 345666665 4455566667899999999998 2 1
Q ss_pred CCCCEEEechhhhcCChHHHHHHHHHHHhhCCCC
Q 030025 78 PNGDAILIKWILHDWSDEHCLKLLKNCHKSIPEG 111 (184)
Q Consensus 78 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pg 111 (184)
.++|++++.. .+++.--+...+.+.+...
T Consensus 299 ~~~D~~ia~T-----~~De~Ni~~~llAk~~gv~ 327 (461)
T 4g65_A 299 DQVDVFIALT-----NEDETNIMSAMLAKRMGAK 327 (461)
T ss_dssp GGCSEEEECC-----SCHHHHHHHHHHHHHTTCS
T ss_pred hhhcEEEEcc-----cCcHHHHHHHHHHHHcCCc
Confidence 2238888732 2334334555556666544
No 477
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=59.69 E-value=31 Score=27.37 Aligned_cols=93 Identities=17% Similarity=0.117 Sum_probs=48.7
Q ss_pred CCeEEEecCCc-Ch-HHHHHHhhCCCCeEEEeec-hhHhhhCCCC------CCce-----------E-EEcccCccCCCC
Q 030025 22 IKQLVDVGGSL-GN-TLKAITSKYPHIKGINFDL-PHVIQHSPEY------PGVK-----------H-VGGDMFQSVPNG 80 (184)
Q Consensus 22 ~~~ilDiG~G~-G~-~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~i~-----------~-~~~d~~~~~~~~ 80 (184)
..+|.=||+|. |. ++..+++. +.+++++|. +..++..++. +++. + ...|..+....+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 46888898883 43 33333333 458999998 6655544332 2211 1 111211112234
Q ss_pred CEEEechhh-----hcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 81 DAILIKWIL-----HDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 81 D~i~~~~~l-----~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
|+|++.-.- ....-.....+++.+.+.|+||..++.
T Consensus 86 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~ 126 (478)
T 2y0c_A 86 DVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD 126 (478)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 888764211 000013445788889999998765543
No 478
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=59.65 E-value=20 Score=26.02 Aligned_cols=87 Identities=14% Similarity=0.061 Sum_probs=48.5
Q ss_pred CeEEEecCCc-C-hHHHHHHhhC-CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 23 KQLVDVGGSL-G-NTLKAITSKY-PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 23 ~~ilDiG~G~-G-~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.+|.=||||. | .++..+++.. +..+++..|. ++..+...+.-++... .|..+.....|+|+..-. +....
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-~~~~~~~~~aDvVilav~-----p~~~~ 77 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-QDNRQGALNADVVVLAVK-----PHQIK 77 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-SCHHHHHSSCSEEEECSC-----GGGHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-CChHHHHhcCCeEEEEeC-----HHHHH
Confidence 5688888873 2 3444444432 2237888887 5555444332244432 222222344598887543 33445
Q ss_pred HHHHHHHhh-CCCCcEEE
Q 030025 99 KLLKNCHKS-IPEGGKVI 115 (184)
Q Consensus 99 ~~l~~~~~~-L~pgG~l~ 115 (184)
.+++++... ++++-.++
T Consensus 78 ~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 78 MVCEELKDILSETKILVI 95 (280)
T ss_dssp HHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhhccCCCeEEE
Confidence 789999888 87664444
No 479
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=59.64 E-value=45 Score=23.79 Aligned_cols=64 Identities=13% Similarity=-0.057 Sum_probs=38.0
Q ss_pred eEEEecCCcChHHHHHHhhC---CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc------CCCCCEEEechhh
Q 030025 24 QLVDVGGSLGNTLKAITSKY---PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS------VPNGDAILIKWIL 89 (184)
Q Consensus 24 ~ilDiG~G~G~~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~------~~~~D~i~~~~~l 89 (184)
+||=.| |+|.++..+++.. +..++++++. +.-.... ...+++++.+|+.++ +...|+|+.....
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 466554 4666666666553 3667888875 3322111 126899999999872 2223888765443
No 480
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=59.15 E-value=44 Score=25.54 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=48.1
Q ss_pred CCCeEEEecCCcChHH-HHHHhhCCCCeEEEeec-hhHhhhCCCCCC--ceEEEcccCccCCCCCEEEe-chhhhcCChH
Q 030025 21 HIKQLVDVGGSLGNTL-KAITSKYPHIKGINFDL-PHVIQHSPEYPG--VKHVGGDMFQSVPNGDAILI-KWILHDWSDE 95 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~-~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~--i~~~~~d~~~~~~~~D~i~~-~~~l~~~~~~ 95 (184)
..++|+-.|+|+-..+ ...+...+..-...+|. +. +.-+..++ +.++.-+..... ..|.|++ .+.+
T Consensus 318 ~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~--k~g~~~~g~~ipi~~p~~~~~~-~~d~vl~~~~~~------ 388 (416)
T 4e2x_A 318 EGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPD--KQNRLTPGAHIPVRPASAFSDP-YPDYALLFAWNH------ 388 (416)
T ss_dssp TTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGG--GTTEECTTTCCEEEEGGGCCSS-CCSEEEESCGGG------
T ss_pred cCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCcc--ccCccCCCCCCcCCCHHHHhhc-CCCEEEEecchh------
Confidence 4678988888764333 22333222333334564 22 12222355 777766554321 1266554 3322
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEe
Q 030025 96 HCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 96 ~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
..++.+++.....-||++++.-
T Consensus 389 -~~ei~~~~~~~~~~g~~~~~~~ 410 (416)
T 4e2x_A 389 -AEEIMAKEQEFHQAGGRWILYV 410 (416)
T ss_dssp -HHHHHHHCHHHHHTTCEEEECS
T ss_pred -HHHHHHHHHHHHhcCCEEEEEC
Confidence 2367888888888999999843
No 481
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=58.16 E-value=66 Score=25.28 Aligned_cols=39 Identities=26% Similarity=0.355 Sum_probs=24.9
Q ss_pred CCeEEEecCCc-C-hHHHHHHhhCCCCeEEEeec-hhHhhhC
Q 030025 22 IKQLVDVGGSL-G-NTLKAITSKYPHIKGINFDL-PHVIQHS 60 (184)
Q Consensus 22 ~~~ilDiG~G~-G-~~~~~l~~~~~~~~~~~~D~-~~~~~~a 60 (184)
.++|.=||+|. | .++..+++..++.+++++|. +.-++..
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l 46 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAW 46 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 35788898873 3 34444555544568999998 6555543
No 482
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=58.04 E-value=21 Score=26.68 Aligned_cols=65 Identities=15% Similarity=0.165 Sum_probs=41.8
Q ss_pred CCeEEEecCCcChHHHHHHhhC---CCCeEEEeec-hhHhhhCCCCCCceEEEcccC-c--cCC----CCCEEEech
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY---PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMF-Q--SVP----NGDAILIKW 87 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~---~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~-~--~~~----~~D~i~~~~ 87 (184)
.++||=.| |+|.++..+++.. ++.++++++. +.-.......++++++.+|+. + .+. ..|+|+-..
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV 99 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence 36788775 6677777766653 4678999986 433333333478999999998 5 222 228887543
No 483
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=57.96 E-value=41 Score=22.83 Aligned_cols=93 Identities=10% Similarity=0.009 Sum_probs=52.8
Q ss_pred eEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCcc----CCCCCEEEechhhhcC--Ch
Q 030025 24 QLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQS----VPNGDAILIKWILHDW--SD 94 (184)
Q Consensus 24 ~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~----~~~~D~i~~~~~l~~~--~~ 94 (184)
+||=.| |+|.+...+++.+ .+.++++++. +.-.... ..++++++.+|+.++ +...|+|+......+- ..
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 79 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-LGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRG 79 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-TCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCT
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc-cCCCceEEecccccccHhhcccCCEEEECCccCCCcchh
Confidence 566665 4566666665542 3568888886 4333322 126899999999873 2223888775544211 11
Q ss_pred HHHHHHHHHHHhhCCC-CcEEEEEe
Q 030025 95 EHCLKLLKNCHKSIPE-GGKVIVVE 118 (184)
Q Consensus 95 ~~~~~~l~~~~~~L~p-gG~l~i~~ 118 (184)
.......+.+.+.++. |+++++..
T Consensus 80 ~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 80 YLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp HHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 2223445566666543 46777654
No 484
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=57.49 E-value=5.7 Score=30.07 Aligned_cols=86 Identities=21% Similarity=0.161 Sum_probs=45.8
Q ss_pred CCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
..++|.=||.| ..+..++++. -+.++++.|. +.. +.+.+ .++.. .+..+-+..+|+|++...+- ++.
T Consensus 164 ~g~tvgIIGlG--~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-~g~~~--~~l~ell~~aDvV~l~~P~t----~~t 233 (335)
T 2g76_A 164 NGKTLGILGLG--RIGREVATRMQSFGMKTIGYDPIISP-EVSAS-FGVQQ--LPLEEIWPLCDFITVHTPLL----PST 233 (335)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTTCEEEEECSSSCH-HHHHH-TTCEE--CCHHHHGGGCSEEEECCCCC----TTT
T ss_pred CcCEEEEEeEC--HHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-cCcee--CCHHHHHhcCCEEEEecCCC----HHH
Confidence 35688888765 4444444331 3578999996 322 11111 22332 23222344459998854432 112
Q ss_pred HHHH-HHHHhhCCCCcEEEE
Q 030025 98 LKLL-KNCHKSIPEGGKVIV 116 (184)
Q Consensus 98 ~~~l-~~~~~~L~pgG~l~i 116 (184)
..++ ++..+.+|||+.|+=
T Consensus 234 ~~li~~~~l~~mk~gailIN 253 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVN 253 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEE
T ss_pred HHhhCHHHHhhCCCCcEEEE
Confidence 2334 456778999887664
No 485
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=57.26 E-value=49 Score=25.27 Aligned_cols=33 Identities=3% Similarity=0.086 Sum_probs=22.2
Q ss_pred CCCEEEechhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 79 NGDAILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 79 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
.+|+|++.-.-+ ....+++++...++|+..++.
T Consensus 82 ~aD~Vilav~~~-----~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 82 GADVVILTVPAF-----AHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp TCSEEEECSCGG-----GHHHHHHHHTTTCCTTCEEEE
T ss_pred CCCEEEEeCchH-----HHHHHHHHHHhhCCCCcEEEE
Confidence 349887744332 234789999999988865544
No 486
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=56.82 E-value=40 Score=24.63 Aligned_cols=71 Identities=13% Similarity=0.093 Sum_probs=39.4
Q ss_pred CeEEEec-CCc--ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 23 KQLVDVG-GSL--GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 23 ~~ilDiG-~G~--G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.+|.=|| +|. +.++..+.+. +.+++++|. +.. +..+....+|+|+..-... ...
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~---------------~~~~~~~~aDvVilavp~~-----~~~ 79 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA---------------VAESILANADVVIVSVPIN-----LTL 79 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG---------------GHHHHHTTCSEEEECSCGG-----GHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc---------------CHHHHhcCCCEEEEeCCHH-----HHH
Confidence 4788887 663 2333333333 346777775 220 1111223448887744332 345
Q ss_pred HHHHHHHhhCCCCcEEE
Q 030025 99 KLLKNCHKSIPEGGKVI 115 (184)
Q Consensus 99 ~~l~~~~~~L~pgG~l~ 115 (184)
.+++++...++|+..++
T Consensus 80 ~vl~~l~~~l~~~~iv~ 96 (298)
T 2pv7_A 80 ETIERLKPYLTENMLLA 96 (298)
T ss_dssp HHHHHHGGGCCTTSEEE
T ss_pred HHHHHHHhhcCCCcEEE
Confidence 67888888888876444
No 487
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=56.61 E-value=2.1 Score=32.72 Aligned_cols=87 Identities=20% Similarity=0.230 Sum_probs=43.8
Q ss_pred CCCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHH
Q 030025 21 HIKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHC 97 (184)
Q Consensus 21 ~~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~ 97 (184)
..++|.=||.| ..+..++++. -+.++++.|. +...+.+.+ .++... .+..+-+..+|+|++...+.. +.
T Consensus 163 ~gktvGIIG~G--~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~-~~l~ell~~aDvV~l~~Plt~----~t 234 (351)
T 3jtm_A 163 EGKTIGTVGAG--RIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-TGAKFV-EDLNEMLPKCDVIVINMPLTE----KT 234 (351)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-HCCEEC-SCHHHHGGGCSEEEECSCCCT----TT
T ss_pred cCCEEeEEEeC--HHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-CCCeEc-CCHHHHHhcCCEEEECCCCCH----HH
Confidence 45788888766 3444444332 2578999985 322211111 123221 122223444599888554421 11
Q ss_pred HHHH-HHHHhhCCCCcEEE
Q 030025 98 LKLL-KNCHKSIPEGGKVI 115 (184)
Q Consensus 98 ~~~l-~~~~~~L~pgG~l~ 115 (184)
..++ ++....+|||..|+
T Consensus 235 ~~li~~~~l~~mk~gailI 253 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIV 253 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEE
T ss_pred HHhhcHHHHhcCCCCCEEE
Confidence 1222 44566788887775
No 488
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=55.80 E-value=57 Score=24.37 Aligned_cols=90 Identities=10% Similarity=0.157 Sum_probs=50.6
Q ss_pred CCCCCeEEEecC--CcChHHHHHHhhCCCCeEEE-eec-hh---HhhhCCCCCCceEEEc------ccCccCC---CCCE
Q 030025 19 FEHIKQLVDVGG--SLGNTLKAITSKYPHIKGIN-FDL-PH---VIQHSPEYPGVKHVGG------DMFQSVP---NGDA 82 (184)
Q Consensus 19 ~~~~~~ilDiG~--G~G~~~~~l~~~~~~~~~~~-~D~-~~---~~~~a~~~~~i~~~~~------d~~~~~~---~~D~ 82 (184)
+++..+||=+|+ |.|..+..+++.. +++++. ++. +. -.+.+++..--..+.. ++.+... ..|+
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSE
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceE
Confidence 778899999996 4788888888875 455444 443 21 2334443321112211 1111111 1377
Q ss_pred EEechhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 83 ILIKWILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 83 i~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
|+-. ...+. +....+.|+|+|++++..
T Consensus 244 vid~-----~g~~~----~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 244 ALNC-----VGGKS----STELLRQLARGGTMVTYG 270 (357)
T ss_dssp EEES-----SCHHH----HHHHHTTSCTTCEEEECC
T ss_pred EEEC-----CCcHH----HHHHHHhhCCCCEEEEEe
Confidence 7542 23222 245789999999999864
No 489
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=55.63 E-value=40 Score=28.68 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=54.3
Q ss_pred CCCCCeEEEec--CCcChHHHHHHhhCCCCeEEEeechhHhhhCCCCCCceEEE---cccCc-----cCCCC-CEEEech
Q 030025 19 FEHIKQLVDVG--GSLGNTLKAITSKYPHIKGINFDLPHVIQHSPEYPGVKHVG---GDMFQ-----SVPNG-DAILIKW 87 (184)
Q Consensus 19 ~~~~~~ilDiG--~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~i~~~~---~d~~~-----~~~~~-D~i~~~~ 87 (184)
+++..+||=.| +|.|..+..+++.. ++++++++.+.-.+..+ ...-..+. .|+.+ .-+.+ |+|+-+.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~-Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~ 420 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHL-GAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSL 420 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHT-TCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECC
Confidence 66788999998 46888999898876 56888877633222222 21111111 11111 11223 8887633
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVE 118 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 118 (184)
. . ..++...++|+|+|+++...
T Consensus 421 g-----g----~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 421 A-----G----EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp C-----T----TTTHHHHTSCTTCEEEEECC
T ss_pred C-----c----HHHHHHHHHhcCCCEEEEec
Confidence 2 1 24678889999999999864
No 490
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=55.31 E-value=12 Score=28.30 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=52.7
Q ss_pred CCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-h---hHhhhCCCCCCceEEEc-ccCccC---CCC-CEEEechhhhc
Q 030025 22 IKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-P---HVIQHSPEYPGVKHVGG-DMFQSV---PNG-DAILIKWILHD 91 (184)
Q Consensus 22 ~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~---~~~~~a~~~~~i~~~~~-d~~~~~---~~~-D~i~~~~~l~~ 91 (184)
..+||-+|+| .|..+..+++.. +.++++++. + .-++.+++. +++.+.. |+.+.. ... |+++-....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~-ga~~v~~~~~~~~~~~~~~~~d~vid~~g~-- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET-KTNYYNSSNGYDKLKDSVGKFDVIIDATGA-- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH-TCEEEECTTCSHHHHHHHCCEEEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh-CCceechHHHHHHHHHhCCCCCEEEECCCC--
Confidence 8899999984 355666666654 458999987 5 555555432 2333311 111111 123 777653321
Q ss_pred CChHHHHHHH-HHHHhhCCCCcEEEEEee
Q 030025 92 WSDEHCLKLL-KNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 92 ~~~~~~~~~l-~~~~~~L~pgG~l~i~~~ 119 (184)
+ ..+ +.+.+.|+|+|++++...
T Consensus 257 ---~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 257 ---D---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp ---C---THHHHHHGGGEEEEEEEEECSC
T ss_pred ---h---HHHHHHHHHHHhcCCEEEEEec
Confidence 1 235 888999999999988654
No 491
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=54.95 E-value=38 Score=25.27 Aligned_cols=95 Identities=16% Similarity=0.241 Sum_probs=48.3
Q ss_pred CCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhh-----CCC----CCCceEEE-cccCccCCCCCEEEechh
Q 030025 21 HIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQH-----SPE----YPGVKHVG-GDMFQSVPNGDAILIKWI 88 (184)
Q Consensus 21 ~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~-----a~~----~~~i~~~~-~d~~~~~~~~D~i~~~~~ 88 (184)
+..+|.=||+|. |.....++.......++.+|+ ++.++. .+. .....+.. .|. +.+.++|+|+...-
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 346788999863 222222222222236888897 543321 110 01333333 454 44555698877541
Q ss_pred hh-cCC---------------hHHHHHHHHHHHhhCCCCcEEEEE
Q 030025 89 LH-DWS---------------DEHCLKLLKNCHKSIPEGGKVIVV 117 (184)
Q Consensus 89 l~-~~~---------------~~~~~~~l~~~~~~L~pgG~l~i~ 117 (184)
.- -.. -+-..++++++.+.. |++++++.
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 11 000 012345666777765 99998875
No 492
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=54.83 E-value=36 Score=24.36 Aligned_cols=51 Identities=18% Similarity=0.202 Sum_probs=33.4
Q ss_pred CeEEEecCCcC---hHHHHHHhhCCCCeEEEeec-hhHh-hhCCCCCCceEEEcccCc
Q 030025 23 KQLVDVGGSLG---NTLKAITSKYPHIKGINFDL-PHVI-QHSPEYPGVKHVGGDMFQ 75 (184)
Q Consensus 23 ~~ilDiG~G~G---~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~i~~~~~d~~~ 75 (184)
++||=-|++.| ..++.+++. +++++..|. ++.. +.+++.+++.++..|+.+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 58 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKERPNLFYFHGDVAD 58 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTS
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCC
Confidence 56776666554 344444443 678888887 4433 444555788999999987
No 493
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=54.66 E-value=34 Score=26.61 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=20.1
Q ss_pred eEEEecCCc-Ch-HHHHHHhhCCCCeEEEeec-hhHhhhC
Q 030025 24 QLVDVGGSL-GN-TLKAITSKYPHIKGINFDL-PHVIQHS 60 (184)
Q Consensus 24 ~ilDiG~G~-G~-~~~~l~~~~~~~~~~~~D~-~~~~~~a 60 (184)
+|.=||+|. |. ++..+++. +.+++++|. ++.++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l 39 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLI 39 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence 567788763 32 23333333 458899998 6555443
No 494
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=54.66 E-value=3.2 Score=30.76 Aligned_cols=83 Identities=11% Similarity=0.039 Sum_probs=43.4
Q ss_pred CCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHH
Q 030025 22 IKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLK 99 (184)
Q Consensus 22 ~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~ 99 (184)
.++|.=||.|. |......++.+ +.++++.|. +... ..+.. ..+..+-+..+|+|++...+- ++...
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr~~~~~------~~~~~-~~~l~ell~~aDiV~l~~P~t----~~t~~ 189 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAF-GMRVIAYTRSSVDQ------NVDVI-SESPADLFRQSDFVLIAIPLT----DKTRG 189 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSCCCT------TCSEE-CSSHHHHHHHCSEEEECCCCC----TTTTT
T ss_pred cchheeeccCchhHHHHHHHHhh-CcEEEEEecccccc------ccccc-cCChHHHhhccCeEEEEeecc----ccchh
Confidence 46888888773 43333333333 579999986 2211 11211 111111233449998855432 11112
Q ss_pred HH-HHHHhhCCCCcEEEE
Q 030025 100 LL-KNCHKSIPEGGKVIV 116 (184)
Q Consensus 100 ~l-~~~~~~L~pgG~l~i 116 (184)
++ ++..+.+|||..++=
T Consensus 190 li~~~~l~~mk~gailIN 207 (290)
T 3gvx_A 190 MVNSRLLANARKNLTIVN 207 (290)
T ss_dssp CBSHHHHTTCCTTCEEEE
T ss_pred hhhHHHHhhhhcCceEEE
Confidence 23 556788999987764
No 495
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=54.57 E-value=80 Score=25.14 Aligned_cols=88 Identities=9% Similarity=0.062 Sum_probs=46.4
Q ss_pred CeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCC--CCceEE-EcccCc---cCCCCCEEEechhhhcCC
Q 030025 23 KQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEY--PGVKHV-GGDMFQ---SVPNGDAILIKWILHDWS 93 (184)
Q Consensus 23 ~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~--~~i~~~-~~d~~~---~~~~~D~i~~~~~l~~~~ 93 (184)
.+|-=||+| .....++... .+.++++.|. ++..+...+. ....+. ..+..+ .++..|+|++.-.-
T Consensus 5 ~kIgiIGlG--~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~---- 78 (484)
T 4gwg_A 5 ADIALIGLA--VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKA---- 78 (484)
T ss_dssp BSEEEECCS--HHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCS----
T ss_pred CEEEEEChh--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCC----
Confidence 456777765 3333333221 2457888887 5554443221 222222 122222 12235888773321
Q ss_pred hHHHHHHHHHHHhhCCCCcEEEE
Q 030025 94 DEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 94 ~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
.+....+++++...|+||..++-
T Consensus 79 ~~~v~~vl~~l~~~L~~g~iIId 101 (484)
T 4gwg_A 79 GQAVDDFIEKLVPLLDTGDIIID 101 (484)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCEEEE
Confidence 13445788999999998865544
No 496
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=54.29 E-value=32 Score=27.09 Aligned_cols=98 Identities=11% Similarity=-0.006 Sum_probs=47.7
Q ss_pred hHHHHHHHhcCCCCCCeEEEecCCc-ChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEe
Q 030025 8 VLQKILEAYKGFEHIKQLVDVGGSL-GNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILI 85 (184)
Q Consensus 8 ~~~~l~~~~~~~~~~~~ilDiG~G~-G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~ 85 (184)
+...+.......-..++|.=+|.|. |......++.+ +.++++.|. +.....+.. .++.+ .++.+-+..+|+|+.
T Consensus 197 lldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-Ga~Viv~D~~p~~a~~A~~-~G~~~--~sL~eal~~ADVVil 272 (436)
T 3h9u_A 197 LVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGF-GARVVVTEVDPINALQAAM-EGYQV--LLVEDVVEEAHIFVT 272 (436)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-TTCEE--CCHHHHTTTCSEEEE
T ss_pred HHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEECCChhhhHHHHH-hCCee--cCHHHHHhhCCEEEE
Confidence 3444444444122567888888763 43333344444 579999997 433222211 12222 233333444577765
Q ss_pred chhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Q 030025 86 KWILHDWSDEHCLKLLKNCHKSIPEGGKVIV 116 (184)
Q Consensus 86 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 116 (184)
...-.++-+ .+..+.+|||+.++=
T Consensus 273 t~gt~~iI~-------~e~l~~MK~gAIVIN 296 (436)
T 3h9u_A 273 TTGNDDIIT-------SEHFPRMRDDAIVCN 296 (436)
T ss_dssp CSSCSCSBC-------TTTGGGCCTTEEEEE
T ss_pred CCCCcCccC-------HHHHhhcCCCcEEEE
Confidence 322112111 134556777765543
No 497
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=54.04 E-value=8.9 Score=28.65 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=55.5
Q ss_pred HHHhcCCCCCCeEEEecCCc--ChHHHHHHhhCCCCeEEEeechhHhhhCCC---CCCceEEEcccCccCCCCCEEEech
Q 030025 13 LEAYKGFEHIKQLVDVGGSL--GNTLKAITSKYPHIKGINFDLPHVIQHSPE---YPGVKHVGGDMFQSVPNGDAILIKW 87 (184)
Q Consensus 13 ~~~~~~~~~~~~ilDiG~G~--G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~---~~~i~~~~~d~~~~~~~~D~i~~~~ 87 (184)
.+++. -+..++|+=||+|. ......+++..+..++...|.....+.+++ ..++.+...|..+-..++|+|++..
T Consensus 113 a~~La-~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT 191 (313)
T 3hdj_A 113 AGALA-RPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTAT 191 (313)
T ss_dssp HHHHS-CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECC
T ss_pred HHhhc-cCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEcc
Confidence 34444 45678999999983 344555555566667888885411111111 1134443334433334459998765
Q ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEeeecCC
Q 030025 88 ILHDWSDEHCLKLLKNCHKSIPEGGKVIVVESVLPE 123 (184)
Q Consensus 88 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 123 (184)
.-.. .++. ..+|+||-.++-.....++
T Consensus 192 ~s~~-------pvl~--~~~l~~G~~V~~vGs~~p~ 218 (313)
T 3hdj_A 192 RSTT-------PLFA--GQALRAGAFVGAIGSSLPH 218 (313)
T ss_dssp CCSS-------CSSC--GGGCCTTCEEEECCCSSTT
T ss_pred CCCC-------cccC--HHHcCCCcEEEECCCCCCc
Confidence 4321 1232 3579999777665555444
No 498
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=53.85 E-value=3.8 Score=30.92 Aligned_cols=84 Identities=13% Similarity=0.049 Sum_probs=42.4
Q ss_pred CCeEEEecCC-cChHHHHHHhhCCCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHHH
Q 030025 22 IKQLVDVGGS-LGNTLKAITSKYPHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCLK 99 (184)
Q Consensus 22 ~~~ilDiG~G-~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~~ 99 (184)
.++|.=||.| .|......++.+ +.++++.|. +... +++ .+.+ .+..+-+..+|+|++...+.. +...
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~--~~~~--~~l~ell~~aDvV~~~~p~t~----~t~~ 214 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM-GATVIGEDVFEIKG--IED--YCTQ--VSLDEVLEKSDIITIHAPYIK----ENGA 214 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCS--CTT--TCEE--CCHHHHHHHCSEEEECCCCCT----TTCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEECCCccHH--HHh--cccc--CCHHHHHhhCCEEEEecCCch----HHHH
Confidence 4678888765 333333333334 578999986 3211 111 1222 122222334599988544321 1112
Q ss_pred HH-HHHHhhCCCCcEEEE
Q 030025 100 LL-KNCHKSIPEGGKVIV 116 (184)
Q Consensus 100 ~l-~~~~~~L~pgG~l~i 116 (184)
++ ++....+|||+.++-
T Consensus 215 li~~~~l~~mk~ga~lin 232 (331)
T 1xdw_A 215 VVTRDFLKKMKDGAILVN 232 (331)
T ss_dssp SBCHHHHHTSCTTEEEEE
T ss_pred HhCHHHHhhCCCCcEEEE
Confidence 23 345567899887764
No 499
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=53.46 E-value=7.3 Score=29.90 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=44.4
Q ss_pred CCeEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCccCCCCCEEEechhhhcCChHHHH
Q 030025 22 IKQLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQSVPNGDAILIKWILHDWSDEHCL 98 (184)
Q Consensus 22 ~~~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~~~~~~D~i~~~~~l~~~~~~~~~ 98 (184)
.++|.=||.| ..+..++++. -+.++++.|. +... .+.. .++.+ .++.+-+..+|+|++...+- ++..
T Consensus 176 gktvGIIGlG--~IG~~vA~~l~~fG~~V~~~d~~~~~~-~~~~-~g~~~--~~l~ell~~aDvV~l~~Plt----~~T~ 245 (365)
T 4hy3_A 176 GSEIGIVGFG--DLGKALRRVLSGFRARIRVFDPWLPRS-MLEE-NGVEP--ASLEDVLTKSDFIFVVAAVT----SENK 245 (365)
T ss_dssp SSEEEEECCS--HHHHHHHHHHTTSCCEEEEECSSSCHH-HHHH-TTCEE--CCHHHHHHSCSEEEECSCSS----CC--
T ss_pred CCEEEEecCC--cccHHHHHhhhhCCCEEEEECCCCCHH-HHhh-cCeee--CCHHHHHhcCCEEEEcCcCC----HHHH
Confidence 4677777655 4555454442 2578999986 2211 1111 23332 23222334459998754433 1122
Q ss_pred HHH-HHHHhhCCCCcEEEE
Q 030025 99 KLL-KNCHKSIPEGGKVIV 116 (184)
Q Consensus 99 ~~l-~~~~~~L~pgG~l~i 116 (184)
.++ ++....+|||+.|+=
T Consensus 246 ~li~~~~l~~mk~gailIN 264 (365)
T 4hy3_A 246 RFLGAEAFSSMRRGAAFIL 264 (365)
T ss_dssp -CCCHHHHHTSCTTCEEEE
T ss_pred hhcCHHHHhcCCCCcEEEE
Confidence 333 556778999988764
No 500
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=52.83 E-value=44 Score=22.69 Aligned_cols=90 Identities=21% Similarity=0.141 Sum_probs=52.6
Q ss_pred eEEEecCCcChHHHHHHhhC--CCCeEEEeec-hhHhhhCCCCCCceEEEcccCc-c------CCCCCEEEechhhhcC-
Q 030025 24 QLVDVGGSLGNTLKAITSKY--PHIKGINFDL-PHVIQHSPEYPGVKHVGGDMFQ-S------VPNGDAILIKWILHDW- 92 (184)
Q Consensus 24 ~ilDiG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~i~~~~~d~~~-~------~~~~D~i~~~~~l~~~- 92 (184)
+||=.| |+|.++..+++.+ .+.++++++. +.- ..+.++++++.+|+.+ + +...|+|+.......-
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~ 77 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQ---VPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKS 77 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGG---SCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSS
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccc---hhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence 566565 5687887777763 3478888886 332 2223789999999987 3 1222888775543321
Q ss_pred ----ChHHHHHHHHHHHhhCCCCcEEEEEee
Q 030025 93 ----SDEHCLKLLKNCHKSIPEGGKVIVVES 119 (184)
Q Consensus 93 ----~~~~~~~~l~~~~~~L~pgG~l~i~~~ 119 (184)
.-.-...+++.+.+. ..++++....
T Consensus 78 ~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS 106 (219)
T 3dqp_A 78 LLKVDLYGAVKLMQAAEKA--EVKRFILLST 106 (219)
T ss_dssp CCCCCCHHHHHHHHHHHHT--TCCEEEEECC
T ss_pred cEeEeHHHHHHHHHHHHHh--CCCEEEEECc
Confidence 111233555555443 2356766554
Done!