Query 030026
Match_columns 184
No_of_seqs 209 out of 1937
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 11:37:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.5 2.3E-14 7.8E-19 113.7 6.7 109 69-184 69-183 (315)
2 3ii7_A Kelch-like protein 7; p 99.5 3.6E-14 1.2E-18 111.9 5.6 110 68-184 25-136 (306)
3 2woz_A Kelch repeat and BTB do 99.5 2.9E-14 9.8E-19 113.2 4.6 109 69-184 80-193 (318)
4 4asc_A Kelch repeat and BTB do 99.5 6E-14 2.1E-18 111.2 5.9 109 68-184 118-230 (315)
5 2xn4_A Kelch-like protein 2; s 99.5 5.7E-14 1.9E-18 110.6 5.7 108 69-184 32-142 (302)
6 1zgk_A Kelch-like ECH-associat 99.5 3.7E-14 1.3E-18 112.2 4.6 110 67-184 39-155 (308)
7 3ii7_A Kelch-like protein 7; p 99.4 8.7E-14 3E-18 109.7 5.7 113 68-184 71-187 (306)
8 2vpj_A Kelch-like protein 12; 99.4 1.2E-13 4.1E-18 108.5 5.0 109 68-184 79-193 (301)
9 2vpj_A Kelch-like protein 12; 99.4 1.9E-13 6.6E-18 107.3 5.4 109 68-184 32-146 (301)
10 2xn4_A Kelch-like protein 2; s 99.4 1.1E-12 3.7E-17 103.2 9.7 82 98-184 14-95 (302)
11 1zgk_A Kelch-like ECH-associat 99.4 1.1E-12 3.7E-17 103.7 9.4 87 97-184 22-108 (308)
12 2woz_A Kelch repeat and BTB do 99.4 1.8E-13 6.3E-18 108.5 4.9 106 71-184 131-240 (318)
13 2uvk_A YJHT; unknown function, 99.4 2.5E-13 8.6E-18 109.2 4.1 107 76-184 42-186 (357)
14 2uvk_A YJHT; unknown function, 99.4 3.7E-12 1.2E-16 102.4 10.1 84 98-184 18-104 (357)
15 2zwa_A Leucine carboxyl methyl 99.2 2.5E-11 8.6E-16 106.4 8.6 83 98-184 396-486 (695)
16 2zwa_A Leucine carboxyl methyl 99.2 8E-12 2.7E-16 109.5 4.8 108 68-183 413-530 (695)
17 1k3i_A Galactose oxidase precu 99.1 1.5E-10 5.1E-15 100.6 7.8 101 71-181 223-329 (656)
18 1fs1_A SKP2 F-BOX, cyclin A/CD 98.8 2.9E-09 1E-13 62.5 4.0 44 46-89 6-49 (53)
19 1k3i_A Galactose oxidase precu 98.8 5.8E-09 2E-13 90.6 7.4 86 98-184 409-506 (656)
20 2e31_A FBS1, F-box only protei 98.6 2.7E-08 9.2E-13 78.5 4.1 50 44-93 46-96 (297)
21 3l2o_B F-box only protein 4; s 97.4 3.4E-05 1.2E-09 60.6 1.2 45 46-90 2-46 (312)
22 2ast_B S-phase kinase-associat 97.2 0.00014 4.9E-09 57.2 2.5 42 46-87 6-47 (336)
23 3v7d_B Cell division control p 97.1 0.00026 8.9E-09 57.7 3.3 41 47-87 13-54 (464)
24 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.00065 2.2E-08 55.2 4.5 43 46-88 16-58 (445)
25 1p22_A F-BOX/WD-repeat protein 96.6 0.0008 2.7E-08 54.7 2.5 43 47-89 9-55 (435)
26 2p1m_B Transport inhibitor res 96.6 0.00064 2.2E-08 57.5 1.8 36 47-82 4-40 (594)
27 3ogk_B Coronatine-insensitive 95.4 0.0054 1.9E-07 51.8 1.9 35 49-83 13-48 (592)
28 3mbr_X Glutamine cyclotransfer 89.5 1.7 5.9E-05 32.9 7.9 67 98-176 29-95 (243)
29 3nol_A Glutamine cyclotransfer 89.5 1.2 4.1E-05 34.2 7.0 68 98-177 51-118 (262)
30 2iwa_A Glutamine cyclotransfer 86.5 3.2 0.00011 31.7 7.9 65 100-176 32-96 (266)
31 3nok_A Glutaminyl cyclase; bet 78.5 3.6 0.00012 31.6 5.2 64 98-176 63-126 (268)
32 3mbr_X Glutamine cyclotransfer 64.9 14 0.00047 27.8 5.7 62 98-177 73-135 (243)
33 3nok_A Glutaminyl cyclase; bet 62.5 18 0.00061 27.7 5.9 62 98-177 104-166 (268)
34 3dsm_A Uncharacterized protein 60.2 34 0.0012 26.0 7.4 63 99-178 53-117 (328)
35 2kwv_A RAD30 homolog B, DNA po 57.9 7.5 0.00026 21.3 2.2 27 40-66 12-38 (48)
36 3nol_A Glutamine cyclotransfer 52.1 23 0.00077 27.0 4.9 62 98-177 95-157 (262)
37 2iwa_A Glutamine cyclotransfer 45.8 73 0.0025 24.0 7.0 62 99-177 75-137 (266)
38 3dsm_A Uncharacterized protein 41.6 1.1E+02 0.0038 23.0 8.0 56 113-178 16-76 (328)
39 2dae_A KIAA0733 protein; mitog 39.7 15 0.00051 22.1 1.7 18 48-65 20-37 (75)
40 1pex_A Collagenase-3, MMP-13; 36.1 1.1E+02 0.0038 22.0 6.4 54 100-176 128-193 (207)
41 3q7m_A Lipoprotein YFGL, BAMB; 34.7 1.5E+02 0.0051 22.5 7.9 65 98-177 52-124 (376)
42 1jmx_B Amine dehydrogenase; ox 29.3 86 0.003 23.1 5.1 65 99-177 10-76 (349)
43 3lrv_A PRE-mRNA-splicing facto 28.5 1.7E+02 0.006 21.7 6.8 54 114-177 149-203 (343)
44 1l0q_A Surface layer protein; 28.1 76 0.0026 24.1 4.6 62 100-177 2-65 (391)
45 3ba0_A Macrophage metalloelast 27.0 1.9E+02 0.0065 22.8 6.8 59 100-177 285-352 (365)
46 3lp9_A LS-24; SEED albumin, pl 26.3 88 0.003 22.9 4.4 60 98-176 71-148 (227)
47 3hfq_A Uncharacterized protein 25.1 69 0.0024 23.9 3.8 59 114-179 18-76 (347)
48 3jrp_A Fusion protein of prote 24.9 1.2E+02 0.004 22.5 5.2 57 114-179 33-92 (379)
49 3u4y_A Uncharacterized protein 24.8 1E+02 0.0035 22.6 4.8 65 98-178 8-74 (331)
50 3vgz_A Uncharacterized protein 22.8 1.9E+02 0.0064 21.2 5.9 68 99-177 52-122 (353)
51 4fmw_A RNA (guanine-9-)-methyl 22.2 32 0.0011 24.9 1.3 12 146-157 119-130 (197)
52 3p5b_L Low density lipoprotein 21.8 2.9E+02 0.0099 21.6 7.4 40 114-153 268-307 (400)
53 1ijq_A LDL receptor, low-densi 21.1 2.6E+02 0.009 20.9 7.5 54 114-176 186-239 (316)
54 3dwl_C Actin-related protein 2 20.6 1.4E+02 0.0047 22.4 4.8 55 114-177 33-88 (377)
55 3c7x_A Matrix metalloproteinas 20.5 2.3E+02 0.008 20.0 6.3 57 99-177 109-177 (196)
56 1k8k_C P40, ARP2/3 complex 41 20.5 1.1E+02 0.0039 22.6 4.2 56 114-178 30-86 (372)
57 2dg1_A DRP35, lactonase; beta 20.4 2.6E+02 0.0088 20.5 7.1 77 99-179 97-175 (333)
58 1yiq_A Quinohemoprotein alcoho 20.2 4E+02 0.014 22.7 8.0 74 98-180 120-199 (689)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.50 E-value=2.3e-14 Score=113.68 Aligned_cols=109 Identities=14% Similarity=0.098 Sum_probs=86.2
Q ss_pred hhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCC----CCCCCceEEeecCCCceecCCCCCCCCccCeEE
Q 030026 69 FPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDP----EGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGV 142 (184)
Q Consensus 69 ~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~----~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~ 142 (184)
+..+....++|..+...+ ..|..++ ..++.||++||.. ......+++||+.+++|+.++++|.+ |.++++
T Consensus 69 ~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~ 144 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLP---SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTV 144 (315)
T ss_dssp EEEEETTTTEEEECCCBS---SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEE
T ss_pred eEEecCCCCeEEECCCCC---cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeE
Confidence 445566778898875433 3444433 4678999999953 22357899999999999999999987 899999
Q ss_pred EEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 143 VVINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 143 ~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
++++++|||+||... .....+++++||+.+++|+.+++|
T Consensus 145 ~~~~~~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~ 183 (315)
T 4asc_A 145 LSHMDLVYVIGGKGS---DRKCLNKMCVYDPKKFEWKELAPM 183 (315)
T ss_dssp EEETTEEEEECCBCT---TSCBCCCEEEEETTTTEEEECCCC
T ss_pred EEECCEEEEEeCCCC---CCcccceEEEEeCCCCeEEECCCC
Confidence 999999999999843 245688999999999999999876
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.47 E-value=3.6e-14 Score=111.87 Aligned_cols=110 Identities=13% Similarity=0.078 Sum_probs=87.2
Q ss_pred chhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEE
Q 030026 68 NFPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVI 145 (184)
Q Consensus 68 ~~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~ 145 (184)
++..+....++|..+...+ ..|..+. ..++.||++||........+++||+.+++|..++++|.+ |.+++++++
T Consensus 25 ~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~ 100 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPF---EKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP-RDSLAACAA 100 (306)
T ss_dssp SEEEEETTTTEEEECCCCS---CCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC-CBSCEEEEE
T ss_pred eEEEecCCCCCEecCCCCC---cccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc-ccceeEEEE
Confidence 4445666778899875433 3344333 467889999997633357899999999999999999987 899999999
Q ss_pred CCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 146 NGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 146 ~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++|||+||... .....+++++||+.+++|+.+++|
T Consensus 101 ~~~iyv~GG~~~---~~~~~~~~~~~d~~~~~W~~~~~~ 136 (306)
T 3ii7_A 101 EGKIYTSGGSEV---GNSALYLFECYDTRTESWHTKPSM 136 (306)
T ss_dssp TTEEEEECCBBT---TBSCCCCEEEEETTTTEEEEECCC
T ss_pred CCEEEEECCCCC---CCcEeeeEEEEeCCCCceEeCCCC
Confidence 999999999863 245678999999999999998875
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.46 E-value=2.9e-14 Score=113.24 Aligned_cols=109 Identities=15% Similarity=0.233 Sum_probs=85.7
Q ss_pred hhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCCC---CCCCceEEeecCCCceecCCCCCCCCccCeEEE
Q 030026 69 FPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDPE---GKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVV 143 (184)
Q Consensus 69 ~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~---~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~ 143 (184)
+..+....++|..+... ...|..++ ..++.||++||... .....+++||+.+++|..++++|.+ |.+++++
T Consensus 80 ~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-VYGHNVI 155 (318)
T ss_dssp EEEEETTTTEEEECSCB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-EESCEEE
T ss_pred EEEEeCCCCcEEECCCC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-ccccEEE
Confidence 44566677899887533 33444433 46789999999642 2246789999999999999999987 8899999
Q ss_pred EECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 144 VINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 144 ~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++++|||+||... .....+++++||+.+++|+.+++|
T Consensus 156 ~~~~~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~ 193 (318)
T 2woz_A 156 SHNGMIYCLGGKTD---DKKCTNRVFIYNPKKGDWKDLAPM 193 (318)
T ss_dssp EETTEEEEECCEES---SSCBCCCEEEEETTTTEEEEECCC
T ss_pred EECCEEEEEcCCCC---CCCccceEEEEcCCCCEEEECCCC
Confidence 99999999999854 234678999999999999998765
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.45 E-value=6e-14 Score=111.23 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=85.0
Q ss_pred chhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCCC--CCCCceEEeecCCCceecCCCCCCCCccCeEEE
Q 030026 68 NFPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDPE--GKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVV 143 (184)
Q Consensus 68 ~~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~--~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~ 143 (184)
++..+....++|..+...+ ..|..+. ..++.||++||... .....+++||+.+++|..++++|.+ |.+++++
T Consensus 118 ~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~ 193 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLP---YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA-RSLFGAT 193 (315)
T ss_dssp CEEEEETTTTEEEECCCCS---SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEE
T ss_pred eEEEECCCCCcEeECCCCC---CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc-hhceEEE
Confidence 3444556677898875433 3344333 46778999999732 2257899999999999999999987 8899999
Q ss_pred EECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 144 VINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 144 ~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++++|||+||... ....+++++||+.+++|+.+++|
T Consensus 194 ~~~~~iyv~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 194 VHDGRIIVAAGVTD----TGLTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp EETTEEEEEEEECS----SSEEEEEEEEETTTTEEEEECCC
T ss_pred EECCEEEEEeccCC----CCccceEEEEECCCCeEEECCCC
Confidence 99999999999864 23577999999999999998765
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.45 E-value=5.7e-14 Score=110.55 Aligned_cols=108 Identities=15% Similarity=0.181 Sum_probs=84.7
Q ss_pred hhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCCCC-CCCceEEeecCCCceecCCCCCCCCccCeEEEEE
Q 030026 69 FPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDPEG-KQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVI 145 (184)
Q Consensus 69 ~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~~-~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~ 145 (184)
...+....+.|..+...+ ..|..++ ..++.||++||.... ....+++||+.+++|..++++|.+ |.+++++++
T Consensus 32 ~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~ 107 (302)
T 2xn4_A 32 VECYDFKEERWHQVAELP---SRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR-RSTLGAAVL 107 (302)
T ss_dssp EEEEETTTTEEEEECCCS---SCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE
T ss_pred EEEEcCcCCcEeEcccCC---cccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc-ccceEEEEE
Confidence 444556677898874333 2343333 457889999996432 346799999999999999999987 889999999
Q ss_pred CCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 146 NGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 146 ~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++|||+||... ....+++++||+.+++|+.+++|
T Consensus 108 ~~~iyv~GG~~~----~~~~~~~~~~d~~~~~W~~~~~~ 142 (302)
T 2xn4_A 108 NGLLYAVGGFDG----STGLSSVEAYNIKSNEWFHVAPM 142 (302)
T ss_dssp TTEEEEEEEECS----SCEEEEEEEEETTTTEEEEECCC
T ss_pred CCEEEEEcCCCC----CccCceEEEEeCCCCeEeecCCC
Confidence 999999999864 34568999999999999998875
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.45 E-value=3.7e-14 Score=112.19 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=86.2
Q ss_pred cchhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeC----CC-CCCCceEEeecCCCceecCCCCCCCCccC
Q 030026 67 SNFPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMD----PE-GKQSQWEVLDCFGNRHRLLPLMPGPVKVG 139 (184)
Q Consensus 67 ~~~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~----~~-~~~~~~~~ydp~t~~W~~lp~~p~~~r~~ 139 (184)
.++..+....+.|..+...+ ..|..++ ..++.||++||. .. .....+++||+.+++|..++++|.+ |.+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~ 114 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQ---VPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNR 114 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS---SCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBT
T ss_pred ceEEEEcCCCCeEeECCCCC---cccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccc
Confidence 34556677788999884333 2343332 457889999996 22 1246799999999999999999987 889
Q ss_pred eEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 140 FGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 140 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++++++++|||+||... ....+++++||+.+++|+.+++|
T Consensus 115 ~~~~~~~~~iyv~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~ 155 (308)
T 1zgk_A 115 IGVGVIDGHIYAVGGSHG----CIHHNSVERYEPERDEWHLVAPM 155 (308)
T ss_dssp CEEEEETTEEEEECCEET----TEECCCEEEEETTTTEEEECCCC
T ss_pred cEEEEECCEEEEEcCCCC----CcccccEEEECCCCCeEeECCCC
Confidence 999999999999999864 34578899999999999999775
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.44 E-value=8.7e-14 Score=109.70 Aligned_cols=113 Identities=17% Similarity=0.151 Sum_probs=86.2
Q ss_pred chhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCC-C-CCCCceEEeecCCCceecCCCCCCCCccCeEEE
Q 030026 68 NFPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDP-E-GKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVV 143 (184)
Q Consensus 68 ~~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~-~-~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~ 143 (184)
.+..+....++|..+...+ ..|..+. ..++.||++||.. . .....+++||+.+++|..++++|.+ |.+++++
T Consensus 71 ~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~ 146 (306)
T 3ii7_A 71 RMDCYNVVKDSWYSKLGPP---TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMV 146 (306)
T ss_dssp EEEEEETTTTEEEEEECCS---SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEE
T ss_pred eEEEEeCCCCeEEECCCCC---ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEE
Confidence 4445666778898875432 3444333 4678899999964 2 2357899999999999999999987 8899999
Q ss_pred EECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 144 VINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 144 ~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++++|||+||...........+++++||+.+++|+.+++|
T Consensus 147 ~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 187 (306)
T 3ii7_A 147 EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM 187 (306)
T ss_dssp EETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC
T ss_pred EECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc
Confidence 99999999999864211112278999999999999998875
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.41 E-value=1.2e-13 Score=108.55 Aligned_cols=109 Identities=19% Similarity=0.269 Sum_probs=85.2
Q ss_pred chhhHhhcchh---hhhhhcchhhHHHHHhhc--ccccEEEEEeeCCCCC-CCceEEeecCCCceecCCCCCCCCccCeE
Q 030026 68 NFPAMGTVCKK---WRSFIRSKEFITVRKLLG--LLEEWLCILTMDPEGK-QSQWEVLDCFGNRHRLLPLMPGPVKVGFG 141 (184)
Q Consensus 68 ~~~~~~~Vsk~---W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~~~-~~~~~~ydp~t~~W~~lp~~p~~~r~~~~ 141 (184)
++..+....+. |..+...+ ..|..++ ..++.||++||..... ...+++||+.+++|..++++|.+ |.+++
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~ 154 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMN---VRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGAG 154 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCS---SCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSCE
T ss_pred eEEEEECCCCCCCeeEECCCCC---CCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccce
Confidence 34455566677 98885433 3444333 4578999999975432 46899999999999999999877 88999
Q ss_pred EEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 142 VVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 142 ~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++++++||++||... ....+++++||+.+++|+.+++|
T Consensus 155 ~~~~~~~iyv~GG~~~----~~~~~~~~~~d~~~~~W~~~~~~ 193 (301)
T 2vpj_A 155 LVVASGVIYCLGGYDG----LNILNSVEKYDPHTGHWTNVTPM 193 (301)
T ss_dssp EEEETTEEEEECCBCS----SCBCCCEEEEETTTTEEEEECCC
T ss_pred EEEECCEEEEECCCCC----CcccceEEEEeCCCCcEEeCCCC
Confidence 9999999999999864 34678999999999999998765
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.40 E-value=1.9e-13 Score=107.34 Aligned_cols=109 Identities=12% Similarity=0.179 Sum_probs=85.0
Q ss_pred chhhHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCCCC-CCCceEEeecCCCc---eecCCCCCCCCccCeE
Q 030026 68 NFPAMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDPEG-KQSQWEVLDCFGNR---HRLLPLMPGPVKVGFG 141 (184)
Q Consensus 68 ~~~~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~~-~~~~~~~ydp~t~~---W~~lp~~p~~~r~~~~ 141 (184)
++..+....+.|..+...+. .|..++ ..++.||++||.... ....+++||+.+++ |+.++++|.+ |.+++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~ 107 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITR---KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLAG 107 (301)
T ss_dssp CEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSCE
T ss_pred EEEEEcCCCCeEEeCCCCCh---hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-cccee
Confidence 34455667788988754332 343333 457889999997532 24679999999999 9999999987 89999
Q ss_pred EEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 142 VVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 142 ~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+++++++|||+||... ....+++++||+.+++|+.+++|
T Consensus 108 ~~~~~~~lyv~GG~~~----~~~~~~~~~~d~~~~~W~~~~~~ 146 (301)
T 2vpj_A 108 ATTLGDMIYVSGGFDG----SRRHTSMERYDPNIDQWSMLGDM 146 (301)
T ss_dssp EEEETTEEEEECCBCS----SCBCCEEEEEETTTTEEEEEEEC
T ss_pred EEEECCEEEEEcccCC----CcccceEEEEcCCCCeEEECCCC
Confidence 9999999999999864 34578999999999999988654
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=103.17 Aligned_cols=82 Identities=18% Similarity=0.276 Sum_probs=70.4
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNR 177 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~ 177 (184)
.++.||++||........+++||+.+++|..++++|.+ |.++++++++++|||+||... ....+++++||+.+++
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~----~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR-RCRAGMVYMAGLVFAVGGFNG----SLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEESCBCS----SSBCCCEEEEETTTTE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc-cccceEEEECCEEEEEeCcCC----CccccceEEECCCCCc
Confidence 45789999997554457799999999999999999987 889999999999999999863 3457899999999999
Q ss_pred eecCCCC
Q 030026 178 FGSVAFY 184 (184)
Q Consensus 178 W~~~~~m 184 (184)
|+.+++|
T Consensus 89 W~~~~~~ 95 (302)
T 2xn4_A 89 WTSVANM 95 (302)
T ss_dssp EEEECCC
T ss_pred eeeCCCC
Confidence 9998875
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.40 E-value=1.1e-12 Score=103.74 Aligned_cols=87 Identities=15% Similarity=0.113 Sum_probs=71.6
Q ss_pred ccccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 97 LLEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 97 ~~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
..++.||++||........+++||+.+++|..++++|.+ |.++++++++++|||+||...........+++++||+.++
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP-RSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc-cccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 457789999997433457899999999999999999987 8899999999999999998310002345789999999999
Q ss_pred CeecCCCC
Q 030026 177 RFGSVAFY 184 (184)
Q Consensus 177 ~W~~~~~m 184 (184)
+|+.+++|
T Consensus 101 ~W~~~~~~ 108 (308)
T 1zgk_A 101 QWSPCAPM 108 (308)
T ss_dssp EEEECCCC
T ss_pred eEeECCCC
Confidence 99999876
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.39 E-value=1.8e-13 Score=108.55 Aligned_cols=106 Identities=18% Similarity=0.205 Sum_probs=82.4
Q ss_pred hHhhcchhhhhhhcchhhHHHHHhhc--ccccEEEEEeeCCC--CCCCceEEeecCCCceecCCCCCCCCccCeEEEEEC
Q 030026 71 AMGTVCKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMDPE--GKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVIN 146 (184)
Q Consensus 71 ~~~~Vsk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~~~--~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~ 146 (184)
.+....++|..+...+ ..|..++ ..++.||++||... .....+++||+.+++|..++++|.+ |.++++++++
T Consensus 131 ~yd~~~~~W~~~~~~p---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~ 206 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLP---IKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP-RSMFGVAIHK 206 (318)
T ss_dssp EEETTTTEEEEECCCS---SCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEET
T ss_pred EEeCCCCCEeECCCCC---CcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC-cccceEEEEC
Confidence 3445667888775333 2343333 46788999998632 2246799999999999999999987 8889999999
Q ss_pred CEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCCC
Q 030026 147 GKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 147 ~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
++|||+||... ....+++++||+.+++|+.+++|
T Consensus 207 ~~iyv~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~ 240 (318)
T 2woz_A 207 GKIVIAGGVTE----DGLSASVEAFDLKTNKWEVMTEF 240 (318)
T ss_dssp TEEEEEEEEET----TEEEEEEEEEETTTCCEEECCCC
T ss_pred CEEEEEcCcCC----CCccceEEEEECCCCeEEECCCC
Confidence 99999999864 23567999999999999998765
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.37 E-value=2.5e-13 Score=109.24 Aligned_cols=107 Identities=15% Similarity=0.022 Sum_probs=78.5
Q ss_pred chhhhhhhcchhhHHHHHhhc--ccccEEEEEeeC-C--C---CCCCceEEeecCCCceecCCCCCCCCccCeEEEEECC
Q 030026 76 CKKWRSFIRSKEFITVRKLLG--LLEEWLCILTMD-P--E---GKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVING 147 (184)
Q Consensus 76 sk~W~~l~~s~~~~~~r~~~~--~~~~~lyv~gg~-~--~---~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~ 147 (184)
.++|..+...+. ..|..++ ..++.|||+||. . . .....+++||+.+++|..++++++.+|.+++++++++
T Consensus 42 ~~~W~~~~~~p~--~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~ 119 (357)
T 2uvk_A 42 DKKWTALAAFPG--GPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNG 119 (357)
T ss_dssp SCCEEECCCCTT--CCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETT
T ss_pred CCCeeECCCCCC--CcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECC
Confidence 478988754331 2344333 467899999997 2 1 1246899999999999999999833488998888999
Q ss_pred EEEEEeeeecCCC------------------------------CCCCCCeEEEEeCCCCCeecCCCC
Q 030026 148 KLVVMAGYSVIDG------------------------------TASASADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 148 ~lyv~GG~~~~~~------------------------------~~~~~~~v~~ydp~t~~W~~~~~m 184 (184)
+|||+||...... .....+++++||+.+++|+.+++|
T Consensus 120 ~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 186 (357)
T 2uvk_A 120 KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES 186 (357)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCC
Confidence 9999999753100 001358999999999999987654
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.35 E-value=3.7e-12 Score=102.40 Aligned_cols=84 Identities=20% Similarity=0.256 Sum_probs=68.8
Q ss_pred cccEEEEEeeCCCCCCCceEEeecC--CCceecCCCCCCCCccCeEEEEECCEEEEEeee-ecCCCCCCCCCeEEEEeCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCF--GNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGY-SVIDGTASASADVYQYDSC 174 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~--t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~-~~~~~~~~~~~~v~~ydp~ 174 (184)
.++.||++||... ..+++||+. +++|..++++|..+|.++++++++++|||+||. ....+.....+++++||+.
T Consensus 18 ~~~~iyv~GG~~~---~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 18 DNDTVYIGLGSAG---TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp ETTEEEEECGGGT---TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred ECCEEEEEeCcCC---CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 4788999999753 469999998 489999999994338999999999999999998 3111123467899999999
Q ss_pred CCCeecCCCC
Q 030026 175 LNRFGSVAFY 184 (184)
Q Consensus 175 t~~W~~~~~m 184 (184)
+++|+++++|
T Consensus 95 ~~~W~~~~~~ 104 (357)
T 2uvk_A 95 TNSWVKLMSH 104 (357)
T ss_dssp TTEEEECSCC
T ss_pred CCcEEECCCC
Confidence 9999999876
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.22 E-value=2.5e-11 Score=106.37 Aligned_cols=83 Identities=10% Similarity=0.102 Sum_probs=69.9
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCceecCC-C-----CCCCCccCeEEEEE--CCEEEEEeeeecCCCCCCCCCeEE
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLP-L-----MPGPVKVGFGVVVI--NGKLVVMAGYSVIDGTASASADVY 169 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp-~-----~p~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~v~ 169 (184)
.++.||++||......+.+++||+.+++|..++ + +|.+ |.+|+++++ +++|||+||.... ....++++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~-R~~hs~~~~~~~~~lyv~GG~~~~---~~~~~dv~ 471 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA-RMCHTFTTISRNNQLLLIGGRKAP---HQGLSDNW 471 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC-CBSCEEEEETTTTEEEEECCBSST---TCBCCCCE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc-ccceEEEEEccCCEEEEEcCCCCC---CCccccEE
Confidence 577899999975434578999999999999998 6 5665 889999999 9999999998642 23678999
Q ss_pred EEeCCCCCeecCCCC
Q 030026 170 QYDSCLNRFGSVAFY 184 (184)
Q Consensus 170 ~ydp~t~~W~~~~~m 184 (184)
+||+.+++|+.+++|
T Consensus 472 ~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 472 IFDMKTREWSMIKSL 486 (695)
T ss_dssp EEETTTTEEEECCCC
T ss_pred EEeCCCCcEEECCCC
Confidence 999999999999876
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.20 E-value=8e-12 Score=109.54 Aligned_cols=108 Identities=10% Similarity=0.099 Sum_probs=83.3
Q ss_pred chhhHhhcchhhhhhh-cc--hhhHHHHHhhc--cc--ccEEEEEeeCCCC--CCCceEEeecCCCceecCCCCCCCCcc
Q 030026 68 NFPAMGTVCKKWRSFI-RS--KEFITVRKLLG--LL--EEWLCILTMDPEG--KQSQWEVLDCFGNRHRLLPLMPGPVKV 138 (184)
Q Consensus 68 ~~~~~~~Vsk~W~~l~-~s--~~~~~~r~~~~--~~--~~~lyv~gg~~~~--~~~~~~~ydp~t~~W~~lp~~p~~~r~ 138 (184)
+...+....+.|..+. .. ..+...|..++ .. ++.|||+||.... ..+.+++||+.+++|..++++|.+ |.
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~ 491 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RF 491 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CB
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cc
Confidence 3445566778898875 31 12333454443 45 8899999997542 257899999999999999999987 89
Q ss_pred CeEEEEE-CCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecCCC
Q 030026 139 GFGVVVI-NGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSVAF 183 (184)
Q Consensus 139 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~~~ 183 (184)
+++++++ +++|||+||.... . ++++||+.+++|+.+++
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~~-----~--~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTEG-----P--AMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp SCEEEECTTSCEEEECCBCSS-----C--SEEEEETTTTEEEECCC
T ss_pred cceEEEEcCCEEEEECCCCCC-----C--CEEEEECCCCceEEccC
Confidence 9999986 9999999998641 1 89999999999999875
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.10 E-value=1.5e-10 Score=100.60 Aligned_cols=101 Identities=9% Similarity=0.024 Sum_probs=76.7
Q ss_pred hHhhcchhhhhhhcchhhHHHHHhh--c---ccccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEE
Q 030026 71 AMGTVCKKWRSFIRSKEFITVRKLL--G---LLEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVI 145 (184)
Q Consensus 71 ~~~~Vsk~W~~l~~s~~~~~~r~~~--~---~~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~ 145 (184)
.+....++|+.+...+ ..|..+ + ..++.||++||... ..+++||+.+++|..+++|+.. |..++++++
T Consensus 223 ~yd~~t~~w~~~~~~~---~~~~~~~~~~~~~~~g~lyv~GG~~~---~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~ 295 (656)
T 1k3i_A 223 SWDPSTGIVSDRTVTV---TKHDMFCPGISMDGNGQIVVTGGNDA---KKTSLYDSSSDSWIPGPDMQVA-RGYQSSATM 295 (656)
T ss_dssp EECTTTCCBCCCEEEE---CSCCCSSCEEEECTTSCEEEECSSST---TCEEEEEGGGTEEEECCCCSSC-CSSCEEEEC
T ss_pred EEeCCCCcEEeCcccC---CCCCCccccccCCCCCCEEEeCCCCC---CceEEecCcCCceeECCCCCcc-ccccceEEe
Confidence 3445667787764322 122222 1 25688999999754 3699999999999999999987 888988888
Q ss_pred -CCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCeecC
Q 030026 146 -NGKLVVMAGYSVIDGTASASADVYQYDSCLNRFGSV 181 (184)
Q Consensus 146 -~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~~~ 181 (184)
+|+|||+||... .....+++++||+.+++|+.+
T Consensus 296 ~dg~iyv~GG~~~---~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 296 SDGRVFTIGGSWS---GGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TTSCEEEECCCCC---SSSCCCCEEEEETTTTEEEEE
T ss_pred cCCeEEEEeCccc---CCcccccceEeCCCCCcceeC
Confidence 999999999532 133678899999999999986
No 18
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.83 E-value=2.9e-09 Score=62.55 Aligned_cols=44 Identities=18% Similarity=0.385 Sum_probs=38.1
Q ss_pred CCCCCCChHHHHHHHhccCCccchhhHhhcchhhhhhhcchhhH
Q 030026 46 SPLLPGLPDDVAKCILALVPRSNFPAMGTVCKKWRSFIRSKEFI 89 (184)
Q Consensus 46 ~~~~~~LP~dl~~~il~rlp~~~~~~~~~Vsk~W~~l~~s~~~~ 89 (184)
...|..||+|++.+||++||..++.+++.|||+|+.++.++.+.
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 45788999999999999999999999999999999999876653
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.83 E-value=5.8e-09 Score=90.59 Aligned_cols=86 Identities=8% Similarity=-0.043 Sum_probs=66.7
Q ss_pred cccEEEEEeeCCCC----CCC---ceEEeecCCCceecCC--CCCCCCccCeEEEEE-CCEEEEEeeeecCC--CCCCCC
Q 030026 98 LEEWLCILTMDPEG----KQS---QWEVLDCFGNRHRLLP--LMPGPVKVGFGVVVI-NGKLVVMAGYSVID--GTASAS 165 (184)
Q Consensus 98 ~~~~lyv~gg~~~~----~~~---~~~~ydp~t~~W~~lp--~~p~~~r~~~~~~~~-~~~lyv~GG~~~~~--~~~~~~ 165 (184)
.++.||++||.... ... .+++||+.++.|..+. +||.+ |..++++++ +++|||+||..... +.....
T Consensus 409 ~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~-R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~ 487 (656)
T 1k3i_A 409 VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA-RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 487 (656)
T ss_dssp TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC-CBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC-cccCCeEECCCCCEEEECCcccCcCcCCCCcc
Confidence 36889999995321 123 6789999999999986 88887 878887777 99999999975321 113457
Q ss_pred CeEEEEeCCCCCeecCCCC
Q 030026 166 ADVYQYDSCLNRFGSVAFY 184 (184)
Q Consensus 166 ~~v~~ydp~t~~W~~~~~m 184 (184)
.++++||+.+++|+.+++|
T Consensus 488 ~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 488 FTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCCEEEEGGGTEEEECCCC
T ss_pred cceEEEcCCCCceeecCCC
Confidence 8999999999999998875
No 20
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.59 E-value=2.7e-08 Score=78.46 Aligned_cols=50 Identities=20% Similarity=0.425 Sum_probs=44.0
Q ss_pred CCCCCCCCChHHHHHHHhccCCccchh-hHhhcchhhhhhhcchhhHHHHH
Q 030026 44 LDSPLLPGLPDDVAKCILALVPRSNFP-AMGTVCKKWRSFIRSKEFITVRK 93 (184)
Q Consensus 44 ~~~~~~~~LP~dl~~~il~rlp~~~~~-~~~~Vsk~W~~l~~s~~~~~~r~ 93 (184)
+....+..||+|++.+||++||..++. ++++|||+|+.++.++.|...+.
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~ 96 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKC 96 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHH
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHh
Confidence 335688999999999999999999999 99999999999999988766543
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.42 E-value=3.4e-05 Score=60.59 Aligned_cols=45 Identities=22% Similarity=0.406 Sum_probs=40.1
Q ss_pred CCCCCCChHHHHHHHhccCCccchhhHhhcchhhhhhhcchhhHH
Q 030026 46 SPLLPGLPDDVAKCILALVPRSNFPAMGTVCKKWRSFIRSKEFIT 90 (184)
Q Consensus 46 ~~~~~~LP~dl~~~il~rlp~~~~~~~~~Vsk~W~~l~~s~~~~~ 90 (184)
++.|..||+|++.+||+.|+..++.++..|||.|+.++.++.+.+
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr 46 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 46 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHH
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHH
Confidence 345678999999999999999999999999999999998877654
No 22
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.19 E-value=0.00014 Score=57.21 Aligned_cols=42 Identities=19% Similarity=0.402 Sum_probs=37.1
Q ss_pred CCCCCCChHHHHHHHhccCCccchhhHhhcchhhhhhhcchh
Q 030026 46 SPLLPGLPDDVAKCILALVPRSNFPAMGTVCKKWRSFIRSKE 87 (184)
Q Consensus 46 ~~~~~~LP~dl~~~il~rlp~~~~~~~~~Vsk~W~~l~~s~~ 87 (184)
...|..||+|++.+||.+|+..++.+++.|||+|+.++.++.
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 567899999999999999999999999999999999975443
No 23
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.11 E-value=0.00026 Score=57.73 Aligned_cols=41 Identities=20% Similarity=0.358 Sum_probs=37.1
Q ss_pred CCCCCChHHHHHHHhccCCccchhhHhhcchhhhhhhcc-hh
Q 030026 47 PLLPGLPDDVAKCILALVPRSNFPAMGTVCKKWRSFIRS-KE 87 (184)
Q Consensus 47 ~~~~~LP~dl~~~il~rlp~~~~~~~~~Vsk~W~~l~~s-~~ 87 (184)
..|..||+|++.+||+.|+..++.++..|||.|+.++.+ +.
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~ 54 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTS 54 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHH
Confidence 356789999999999999999999999999999999977 44
No 24
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.97 E-value=0.00065 Score=55.24 Aligned_cols=43 Identities=16% Similarity=0.464 Sum_probs=38.2
Q ss_pred CCCCCCChHHHHHHHhccCCccchhhHhhcchhhhhhhcchhh
Q 030026 46 SPLLPGLPDDVAKCILALVPRSNFPAMGTVCKKWRSFIRSKEF 88 (184)
Q Consensus 46 ~~~~~~LP~dl~~~il~rlp~~~~~~~~~Vsk~W~~l~~s~~~ 88 (184)
...+..||+|++.+||++|+..++.++..|||+|+.++.+..+
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~ 58 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLL 58 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhH
Confidence 4468899999999999999999999999999999998876544
No 25
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.63 E-value=0.0008 Score=54.67 Aligned_cols=43 Identities=23% Similarity=0.451 Sum_probs=37.4
Q ss_pred CCCCCChHH----HHHHHhccCCccchhhHhhcchhhhhhhcchhhH
Q 030026 47 PLLPGLPDD----VAKCILALVPRSNFPAMGTVCKKWRSFIRSKEFI 89 (184)
Q Consensus 47 ~~~~~LP~d----l~~~il~rlp~~~~~~~~~Vsk~W~~l~~s~~~~ 89 (184)
..+..||+| ++.+||++|+..++.++..|||+|+.++.++.+.
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w 55 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLW 55 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHH
Confidence 356679999 9999999999999999999999999998765543
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.61 E-value=0.00064 Score=57.54 Aligned_cols=36 Identities=17% Similarity=0.542 Sum_probs=28.9
Q ss_pred CCCCCChHHHHHHHhccCC-ccchhhHhhcchhhhhh
Q 030026 47 PLLPGLPDDVAKCILALVP-RSNFPAMGTVCKKWRSF 82 (184)
Q Consensus 47 ~~~~~LP~dl~~~il~rlp-~~~~~~~~~Vsk~W~~l 82 (184)
..|..||+|++.+||.+|| ..+..+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4788999999999999999 88899999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.38 E-value=0.0054 Score=51.80 Aligned_cols=35 Identities=17% Similarity=0.377 Sum_probs=31.6
Q ss_pred CCCChHHHHHHHhccC-CccchhhHhhcchhhhhhh
Q 030026 49 LPGLPDDVAKCILALV-PRSNFPAMGTVCKKWRSFI 83 (184)
Q Consensus 49 ~~~LP~dl~~~il~rl-p~~~~~~~~~Vsk~W~~l~ 83 (184)
...||+|++.+||.+| +..+..+++.|||+|+.+.
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 3479999999999999 8889999999999999873
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.53 E-value=1.7 Score=32.87 Aligned_cols=67 Identities=21% Similarity=0.210 Sum_probs=43.8
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
.++.||+-.|... ...+..+|+.+.+-..--+++.. ..+.+++..+++||++... .+.+++||+.|.
T Consensus 29 ~~~~LyestG~~g--~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~---------~~~v~v~D~~tl 95 (243)
T 3mbr_X 29 LRGHLYESTGETG--RSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWR---------NHEGFVYDLATL 95 (243)
T ss_dssp ETTEEEEEECCTT--SCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESS---------SSEEEEEETTTT
T ss_pred ECCEEEEECCCCC--CceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEee---------CCEEEEEECCcC
Confidence 3467888776532 25789999998765443334443 3456678889999997532 346777777654
No 29
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.49 E-value=1.2 Score=34.17 Aligned_cols=68 Identities=12% Similarity=-0.029 Sum_probs=43.4
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNR 177 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~ 177 (184)
.++.||+..|... ...+..+|+.+.+-..--+++.. ..+-+++..+++||++... .+.+++||+.|.+
T Consensus 51 ~~~~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~~ly~ltw~---------~~~v~v~D~~t~~ 118 (262)
T 3nol_A 51 RNGYFYESTGLNG--RSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKDKIVGLTWK---------NGLGFVWNIRNLR 118 (262)
T ss_dssp ETTEEEEEEEETT--EEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESS---------SSEEEEEETTTCC
T ss_pred ECCEEEEECCCCC--CceEEEEECCCCcEEEEEecCCc-cceeEEEEeCCEEEEEEee---------CCEEEEEECccCc
Confidence 3567888877532 25688999998764332234432 3445577789999998532 3467777776543
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=86.54 E-value=3.2 Score=31.74 Aligned_cols=65 Identities=17% Similarity=0.038 Sum_probs=42.3
Q ss_pred cEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 100 EWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 100 ~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
+.||+..|... ...+..+|+.+++-..--+++.. ..+.+++..+++||+..- ..+.+.+||+.|.
T Consensus 32 g~Lyvstg~~~--~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g~~lyv~t~---------~~~~v~viD~~t~ 96 (266)
T 2iwa_A 32 DTLFESTGLYG--RSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLNEKLYQVVW---------LKNIGFIYDRRTL 96 (266)
T ss_dssp TEEEEEECSTT--TCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEET---------TCSEEEEEETTTT
T ss_pred CeEEEECCCCC--CCEEEEEECCCCCEEEEEecCCC-cceEEEEEeCCEEEEEEe---------cCCEEEEEECCCC
Confidence 68998876432 26799999998764432223322 244567777889999753 2356888888764
No 31
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=78.46 E-value=3.6 Score=31.64 Aligned_cols=64 Identities=8% Similarity=-0.018 Sum_probs=40.2
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
.++.||+..|... .+..+|+.+.+-..-- ++.. ..+.+++..+++||++... .+.+++||+.|.
T Consensus 63 ~~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~g~~Ly~ltw~---------~~~v~V~D~~Tl 126 (268)
T 3nok_A 63 HQGHFFESTGHQG----TLRQLSLESAQPVWME-RLGN-IFAEGLASDGERLYQLTWT---------EGLLFTWSGMPP 126 (268)
T ss_dssp ETTEEEEEETTTT----EEEECCSSCSSCSEEE-ECTT-CCEEEEEECSSCEEEEESS---------SCEEEEEETTTT
T ss_pred ECCEEEEEcCCCC----EEEEEECCCCcEEeEE-CCCC-cceeEEEEeCCEEEEEEcc---------CCEEEEEECCcC
Confidence 4567888877542 3889999886532211 3332 3344577788899997532 346777777654
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=64.88 E-value=14 Score=27.81 Aligned_cols=62 Identities=19% Similarity=0.150 Sum_probs=40.4
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCcee-cCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHR-LLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~-~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
.++.||++... ...+++||+.+.+-. .++ .. ..+.+++.-++.||+.-| +..++++||.|.
T Consensus 73 ~~~~ly~ltw~----~~~v~v~D~~tl~~~~ti~---~~-~~Gwglt~dg~~L~vSdg----------s~~l~~iDp~t~ 134 (243)
T 3mbr_X 73 WRDRLIQLTWR----NHEGFVYDLATLTPRARFR---YP-GEGWALTSDDSHLYMSDG----------TAVIRKLDPDTL 134 (243)
T ss_dssp ETTEEEEEESS----SSEEEEEETTTTEEEEEEE---CS-SCCCEEEECSSCEEEECS----------SSEEEEECTTTC
T ss_pred eCCEEEEEEee----CCEEEEEECCcCcEEEEEe---CC-CCceEEeeCCCEEEEECC----------CCeEEEEeCCCC
Confidence 45678888653 256899999875422 232 22 345677766777888654 246888888875
Q ss_pred C
Q 030026 177 R 177 (184)
Q Consensus 177 ~ 177 (184)
+
T Consensus 135 ~ 135 (243)
T 3mbr_X 135 Q 135 (243)
T ss_dssp C
T ss_pred e
Confidence 4
No 33
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=62.47 E-value=18 Score=27.70 Aligned_cols=62 Identities=19% Similarity=0.099 Sum_probs=39.7
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCcee-cCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHR-LLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~-~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
.+..||++... ...+++||+.+.+-. .++. . ..+.+++.-++.||+.-| ++.++++||.|.
T Consensus 104 ~g~~Ly~ltw~----~~~v~V~D~~Tl~~~~ti~~---~-~eGwGLt~Dg~~L~vSdG----------s~~l~~iDp~T~ 165 (268)
T 3nok_A 104 DGERLYQLTWT----EGLLFTWSGMPPQRERTTRY---S-GEGWGLCYWNGKLVRSDG----------GTMLTFHEPDGF 165 (268)
T ss_dssp CSSCEEEEESS----SCEEEEEETTTTEEEEEEEC---S-SCCCCEEEETTEEEEECS----------SSEEEEECTTTC
T ss_pred eCCEEEEEEcc----CCEEEEEECCcCcEEEEEeC---C-CceeEEecCCCEEEEECC----------CCEEEEEcCCCC
Confidence 34567777543 256899999875432 3332 2 245667777788888754 246888888875
Q ss_pred C
Q 030026 177 R 177 (184)
Q Consensus 177 ~ 177 (184)
+
T Consensus 166 ~ 166 (268)
T 3nok_A 166 A 166 (268)
T ss_dssp C
T ss_pred e
Confidence 4
No 34
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=60.21 E-value=34 Score=26.04 Aligned_cols=63 Identities=6% Similarity=-0.048 Sum_probs=40.1
Q ss_pred ccEEEEEeeCCCCCCCceEEeecCCCce-ecCCCCCCCCccCeEEEE-ECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 99 EEWLCILTMDPEGKQSQWEVLDCFGNRH-RLLPLMPGPVKVGFGVVV-INGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 99 ~~~lyv~gg~~~~~~~~~~~ydp~t~~W-~~lp~~p~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
+..+|+..... ..+.++|+.+.+- ..++.... ...++. -++++||.... ...|.++|+.++
T Consensus 53 ~~~lyv~~~~~----~~v~viD~~t~~~~~~i~~~~~----p~~i~~~~~g~lyv~~~~---------~~~v~~iD~~t~ 115 (328)
T 3dsm_A 53 DGIGWIVVNNS----HVIFAIDINTFKEVGRITGFTS----PRYIHFLSDEKAYVTQIW---------DYRIFIINPKTY 115 (328)
T ss_dssp TTEEEEEEGGG----TEEEEEETTTCCEEEEEECCSS----EEEEEEEETTEEEEEEBS---------CSEEEEEETTTT
T ss_pred CCEEEEEEcCC----CEEEEEECcccEEEEEcCCCCC----CcEEEEeCCCeEEEEECC---------CCeEEEEECCCC
Confidence 56678776532 5688999988764 33432221 224444 68899997642 246889998887
Q ss_pred Ce
Q 030026 177 RF 178 (184)
Q Consensus 177 ~W 178 (184)
+-
T Consensus 116 ~~ 117 (328)
T 3dsm_A 116 EI 117 (328)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 35
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=57.94 E-value=7.5 Score=21.27 Aligned_cols=27 Identities=26% Similarity=0.395 Sum_probs=20.9
Q ss_pred cccCCCCCCCCCChHHHHHHHhccCCc
Q 030026 40 VAFDLDSPLLPGLPDDVAKCILALVPR 66 (184)
Q Consensus 40 ~~~~~~~~~~~~LP~dl~~~il~rlp~ 66 (184)
..++-++..+..||.|+..++|+--.+
T Consensus 12 lP~~VD~eVF~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 12 LPEGVDQEVFKQLPADIQEEILSGKSR 38 (48)
T ss_dssp SCTTCCGGGTTTSCHHHHHHHTTCCCS
T ss_pred CCCCCCHHHHHHCcHHHHHHHHhcchH
Confidence 355667778899999999999975544
No 36
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=52.10 E-value=23 Score=26.98 Aligned_cols=62 Identities=16% Similarity=0.084 Sum_probs=38.0
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCce-ecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRH-RLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W-~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
.+..||++... ...+++||+.+.+- ..++ .. ..+.+++.-++.||+.-| ++.++++||.|.
T Consensus 95 ~g~~ly~ltw~----~~~v~v~D~~t~~~~~ti~---~~-~eG~glt~dg~~L~~SdG----------s~~i~~iDp~T~ 156 (262)
T 3nol_A 95 WKDKIVGLTWK----NGLGFVWNIRNLRQVRSFN---YD-GEGWGLTHNDQYLIMSDG----------TPVLRFLDPESL 156 (262)
T ss_dssp ETTEEEEEESS----SSEEEEEETTTCCEEEEEE---CS-SCCCCEEECSSCEEECCS----------SSEEEEECTTTC
T ss_pred eCCEEEEEEee----CCEEEEEECccCcEEEEEE---CC-CCceEEecCCCEEEEECC----------CCeEEEEcCCCC
Confidence 35677877543 25689999987542 2333 22 244566655667887544 246888888875
Q ss_pred C
Q 030026 177 R 177 (184)
Q Consensus 177 ~ 177 (184)
+
T Consensus 157 ~ 157 (262)
T 3nol_A 157 T 157 (262)
T ss_dssp S
T ss_pred e
Confidence 4
No 37
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=45.78 E-value=73 Score=24.02 Aligned_cols=62 Identities=16% Similarity=0.075 Sum_probs=37.3
Q ss_pred ccEEEEEeeCCCCCCCceEEeecCCCc-eecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCC
Q 030026 99 EEWLCILTMDPEGKQSQWEVLDCFGNR-HRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNR 177 (184)
Q Consensus 99 ~~~lyv~gg~~~~~~~~~~~ydp~t~~-W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~ 177 (184)
+..||+.... ...+.+||+.+.+ -..++. + . ..+.+++.-++.+|+..| .+.+.++|+.+.+
T Consensus 75 g~~lyv~t~~----~~~v~viD~~t~~v~~~i~~-g-~-~~g~glt~Dg~~l~vs~g----------s~~l~viD~~t~~ 137 (266)
T 2iwa_A 75 NEKLYQVVWL----KNIGFIYDRRTLSNIKNFTH-Q-M-KDGWGLATDGKILYGSDG----------TSILYEIDPHTFK 137 (266)
T ss_dssp TTEEEEEETT----CSEEEEEETTTTEEEEEEEC-C-S-SSCCEEEECSSSEEEECS----------SSEEEEECTTTCC
T ss_pred CCEEEEEEec----CCEEEEEECCCCcEEEEEEC-C-C-CCeEEEEECCCEEEEECC----------CCeEEEEECCCCc
Confidence 4578887643 2568999998753 223321 2 1 234555554567887643 3468888887754
No 38
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=41.62 E-value=1.1e+02 Score=23.02 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=35.6
Q ss_pred CCceEEeecCCCceecCC-----CCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCe
Q 030026 113 QSQWEVLDCFGNRHRLLP-----LMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNRF 178 (184)
Q Consensus 113 ~~~~~~ydp~t~~W~~lp-----~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W 178 (184)
...+..||+.+.++..-- ..+.. .....++..++++||.... ...+.++|+.|.+-
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg-~~~~~i~~~~~~lyv~~~~---------~~~v~viD~~t~~~ 76 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLG-DVAQSMVIRDGIGWIVVNN---------SHVIFAIDINTFKE 76 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCB-SCEEEEEEETTEEEEEEGG---------GTEEEEEETTTCCE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccC-ccceEEEEECCEEEEEEcC---------CCEEEEEECcccEE
Confidence 367889999998765421 11111 1223456678999997642 24688899887764
No 39
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.70 E-value=15 Score=22.11 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=14.6
Q ss_pred CCCCChHHHHHHHhccCC
Q 030026 48 LLPGLPDDVAKCILALVP 65 (184)
Q Consensus 48 ~~~~LP~dl~~~il~rlp 65 (184)
-+|.+|++++.+|+..--
T Consensus 20 rFPEvPd~VVsqc~~qN~ 37 (75)
T 2dae_A 20 KFPEVPEVVVSRCMLQNN 37 (75)
T ss_dssp HSSSSCHHHHHHHHTTTT
T ss_pred hcccCcHHHHHHHHHHhc
Confidence 478999999999985543
No 40
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=36.08 E-value=1.1e+02 Score=22.00 Aligned_cols=54 Identities=17% Similarity=0.030 Sum_probs=31.2
Q ss_pred cEEEEEeeCCCCCCCceEEeecCCCc------------eecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCe
Q 030026 100 EWLCILTMDPEGKQSQWEVLDCFGNR------------HRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASAD 167 (184)
Q Consensus 100 ~~lyv~gg~~~~~~~~~~~ydp~t~~------------W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 167 (184)
+.+|++.| ...+.||..+++ |..+ |. ....+. ..+|++|.+-|. .
T Consensus 128 gk~yfFkG------~~ywr~d~~~~~~d~gyPr~i~~~~~Gi---p~--~iDaAf-~~~g~~YfFkg~-----------~ 184 (207)
T 1pex_A 128 GKTLLFSG------NQVWRYDDTNHIMDKDYPRLIEEDFPGI---GD--KVDAVY-EKNGYIYFFNGP-----------I 184 (207)
T ss_dssp SEEEEEET------TEEEEEETTTTEECSSCCCBHHHHSTTS---CS--CCSEEE-EETTEEEEEETT-----------E
T ss_pred CEEEEEeC------CEEEEEeCcCccccCCCCccHHHcCCCC---CC--CccEEE-EcCCcEEEEECC-----------E
Confidence 56777765 457788876532 3223 22 223333 358999998763 3
Q ss_pred EEEEeCCCC
Q 030026 168 VYQYDSCLN 176 (184)
Q Consensus 168 v~~ydp~t~ 176 (184)
.++||..++
T Consensus 185 y~rf~~~~~ 193 (207)
T 1pex_A 185 QFEYSIWSN 193 (207)
T ss_dssp EEEEETTTT
T ss_pred EEEEeCCcc
Confidence 666666544
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=34.74 E-value=1.5e+02 Score=22.50 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=36.0
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCC--ceecCCCCCC------CCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEE
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGN--RHRLLPLMPG------PVKVGFGVVVINGKLVVMAGYSVIDGTASASADVY 169 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~--~W~~lp~~p~------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~ 169 (184)
.++.+|+.... ..+++||..+. .|+.-..... ........+..++.||+... ...++
T Consensus 52 ~~~~v~~~~~~-----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----------~g~l~ 116 (376)
T 3q7m_A 52 ADNVVYAADRA-----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE----------KAQVY 116 (376)
T ss_dssp ETTEEEEECTT-----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET----------TSEEE
T ss_pred ECCEEEEEcCC-----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC----------CCEEE
Confidence 45677776432 36899998765 4765332110 11122334557888888432 13577
Q ss_pred EEeCCCCC
Q 030026 170 QYDSCLNR 177 (184)
Q Consensus 170 ~ydp~t~~ 177 (184)
.+|..+++
T Consensus 117 a~d~~tG~ 124 (376)
T 3q7m_A 117 ALNTSDGT 124 (376)
T ss_dssp EEETTTCC
T ss_pred EEECCCCC
Confidence 77776653
No 42
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=29.33 E-value=86 Score=23.08 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=34.5
Q ss_pred ccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEE-ECC-EEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 99 EEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVV-ING-KLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 99 ~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
++.+|+..+.. ..+.++|..+.+....-..+.. .....++. -++ .+|+.+.. ...+++||..++
T Consensus 10 ~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~~~v~~~~---------~~~i~~~d~~t~ 75 (349)
T 1jmx_B 10 GHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNH---------YGDIYGIDLDTC 75 (349)
T ss_dssp TCEEEEEEETT----TEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEEEEEETT---------TTEEEEEETTTT
T ss_pred CCEEEEEeCCC----CeEEEEECCCCcEEEEEecCCC-CCCceeEECCCCCEEEEEeCC---------CCcEEEEeCCCC
Confidence 45677776643 5689999988764432222220 01112232 244 46766532 245788887765
Q ss_pred C
Q 030026 177 R 177 (184)
Q Consensus 177 ~ 177 (184)
+
T Consensus 76 ~ 76 (349)
T 1jmx_B 76 K 76 (349)
T ss_dssp E
T ss_pred c
Confidence 4
No 43
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=28.48 E-value=1.7e+02 Score=21.72 Aligned_cols=54 Identities=6% Similarity=-0.076 Sum_probs=28.3
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEE-ECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCC
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVV-INGKLVVMAGYSVIDGTASASADVYQYDSCLNR 177 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~ 177 (184)
..+.+||..+.+-..+...... ..-.+++. -++.+++.|+.+ ..+.+||..+..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~-~~i~~~~~~pdg~~lasg~~d---------g~i~iwd~~~~~ 203 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSD-VEYSSGVLHKDSLLLALYSPD---------GILDVYNLSSPD 203 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSS-CCCCEEEECTTSCEEEEECTT---------SCEEEEESSCTT
T ss_pred CcEEEEECCCCcEEEEEecCCC-CceEEEEECCCCCEEEEEcCC---------CEEEEEECCCCC
Confidence 4588899887654332211111 01112222 256777777643 257778877654
No 44
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=28.11 E-value=76 Score=24.07 Aligned_cols=62 Identities=23% Similarity=0.275 Sum_probs=31.8
Q ss_pred cEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEE-ECC-EEEEEeeeecCCCCCCCCCeEEEEeCCCCC
Q 030026 100 EWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVV-ING-KLVVMAGYSVIDGTASASADVYQYDSCLNR 177 (184)
Q Consensus 100 ~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~ 177 (184)
+.+|+.++.. ..+.+||..+++-...-..... -.+++. -++ .||+.|+.+ ..+.+||..+++
T Consensus 2 ~~l~vs~~~d----~~v~v~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~d---------~~i~v~d~~~~~ 65 (391)
T 1l0q_A 2 TFAYIANSES----DNISVIDVTSNKVTATIPVGSN---PMGAVISPDGTKVYVANAHS---------NDVSIIDTATNN 65 (391)
T ss_dssp EEEEEEETTT----TEEEEEETTTTEEEEEEECSSS---EEEEEECTTSSEEEEEEGGG---------TEEEEEETTTTE
T ss_pred CEEEEEcCCC----CEEEEEECCCCeEEEEeecCCC---cceEEECCCCCEEEEECCCC---------CeEEEEECCCCe
Confidence 3466665532 4688999887654332111111 112222 234 466666432 357777776654
No 45
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=26.98 E-value=1.9e+02 Score=22.79 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=32.2
Q ss_pred cEEEEEeeCCCCCCCceEEeecCCCceec---------CCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEE
Q 030026 100 EWLCILTMDPEGKQSQWEVLDCFGNRHRL---------LPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQ 170 (184)
Q Consensus 100 ~~lyv~gg~~~~~~~~~~~ydp~t~~W~~---------lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ 170 (184)
+.+|++.| .+.+.||..+++-.. .+.+|. ....++..-++++|.+-|. ..++
T Consensus 285 ~~~yfFkG------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~--~iDaA~~~~~g~~YfFkg~-----------~ywr 345 (365)
T 3ba0_A 285 YRTYFFVD------NQYWRYDERRQMMDPGYPKLITKNFQGIGP--KIDAVFYSKNKYYYFFQGS-----------NQFE 345 (365)
T ss_dssp TEEEEEET------TEEEEEETTTTEECSSCCCCHHHHSTTCCS--SCSEEEEETTTEEEEEETT-----------EEEE
T ss_pred CEEEEEEC------CEEEEEeCCcceecCCCCcchhhcCCCCCC--ccceeeEecCCcEEEEeCC-----------EEEE
Confidence 45666655 457788876543211 122222 2233333237899998663 3777
Q ss_pred EeCCCCC
Q 030026 171 YDSCLNR 177 (184)
Q Consensus 171 ydp~t~~ 177 (184)
||..+.+
T Consensus 346 ~d~~~~~ 352 (365)
T 3ba0_A 346 YDFLLQR 352 (365)
T ss_dssp EETTTTE
T ss_pred EECCccE
Confidence 7776543
No 46
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=26.28 E-value=88 Score=22.92 Aligned_cols=60 Identities=8% Similarity=0.003 Sum_probs=32.9
Q ss_pred cccEEEEEeeCCCCCCCceEEee--c-------------CCCceecCCCC--CCCCccCeEEEE-ECCEEEEEeeeecCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLD--C-------------FGNRHRLLPLM--PGPVKVGFGVVV-INGKLVVMAGYSVID 159 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~yd--p-------------~t~~W~~lp~~--p~~~r~~~~~~~-~~~~lyv~GG~~~~~ 159 (184)
.++.+|++.| ...+.|+ + .+..|..||.- |. ....+... .++++|++-|.
T Consensus 71 ~~g~~~fFKg------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~--~IDAA~~~~~~~k~yfFkG~---- 138 (227)
T 3lp9_A 71 ENNEAFIFYE------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES--GIDAAYRSTRGKEVYLFKGD---- 138 (227)
T ss_dssp STTEEEEEET------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT--CCSEEEECSSTTEEEEEETT----
T ss_pred CCCEEEEEeC------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCC--cccEEEEECCCCEEEEEECC----
Confidence 4566888865 3455665 2 22346666521 22 22333332 36899998763
Q ss_pred CCCCCCCeEEEEeCCCC
Q 030026 160 GTASASADVYQYDSCLN 176 (184)
Q Consensus 160 ~~~~~~~~v~~ydp~t~ 176 (184)
.+|+||..++
T Consensus 139 -------~yw~~d~~~~ 148 (227)
T 3lp9_A 139 -------QYARIDYGSN 148 (227)
T ss_dssp -------EEEEEETTTT
T ss_pred -------EEEEEeCCCc
Confidence 3677776543
No 47
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=25.05 E-value=69 Score=23.95 Aligned_cols=59 Identities=7% Similarity=-0.077 Sum_probs=28.1
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCee
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLNRFG 179 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~ 179 (184)
..++.+|..+.++..+............+..-+|+||+.+... ....+++||..++.++
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~-------~~~~v~~~~~~~g~~~ 76 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED-------DEGGIAAWQIDGQTAH 76 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET-------TEEEEEEEEEETTEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC-------CCceEEEEEecCCcEE
Confidence 4566778887776654321111011111122367777765321 1234666666555543
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=24.91 E-value=1.2e+02 Score=22.52 Aligned_cols=57 Identities=16% Similarity=0.311 Sum_probs=28.1
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEEE-C--CEEEEEeeeecCCCCCCCCCeEEEEeCCCCCee
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVI-N--GKLVVMAGYSVIDGTASASADVYQYDSCLNRFG 179 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W~ 179 (184)
..+.+||.....+..+..+......-.+++.. + +.+++.|+.+ ..+.+||..+++|.
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---------GKVLIWKEENGRWS 92 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---------SCEEEEEEETTEEE
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC---------CEEEEEEcCCCcee
Confidence 34778887655554443322210111122221 2 5666666543 24677777666554
No 49
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=24.85 E-value=1e+02 Score=22.60 Aligned_cols=65 Identities=6% Similarity=-0.026 Sum_probs=36.7
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCCceecCCCCCCCCccCeEEEE-ECCE-EEEEeeeecCCCCCCCCCeEEEEeCCC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVV-INGK-LVVMAGYSVIDGTASASADVYQYDSCL 175 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~~v~~ydp~t 175 (184)
....+|+..... ..+.+||..+.+....-..+.. . ..++. -+++ +|+.+.. ...+++||..+
T Consensus 8 ~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~-~--~~~~~s~dg~~l~~~~~~---------~~~i~~~d~~~ 71 (331)
T 3u4y_A 8 TSNFGIVVEQHL----RRISFFSTDTLEILNQITLGYD-F--VDTAITSDCSNVVVTSDF---------CQTLVQIETQL 71 (331)
T ss_dssp CCCEEEEEEGGG----TEEEEEETTTCCEEEEEECCCC-E--EEEEECSSSCEEEEEEST---------TCEEEEEECSS
T ss_pred CCCEEEEEecCC----CeEEEEeCcccceeeeEEccCC-c--ceEEEcCCCCEEEEEeCC---------CCeEEEEECCC
Confidence 345677776542 4688999988776544333322 1 12222 2454 7765532 23688888877
Q ss_pred CCe
Q 030026 176 NRF 178 (184)
Q Consensus 176 ~~W 178 (184)
++-
T Consensus 72 ~~~ 74 (331)
T 3u4y_A 72 EPP 74 (331)
T ss_dssp SSC
T ss_pred Cce
Confidence 653
No 50
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=22.77 E-value=1.9e+02 Score=21.22 Aligned_cols=68 Identities=15% Similarity=-0.059 Sum_probs=33.6
Q ss_pred ccEEEEEeeCCCC--CCCceEEeecCCCceecCCCCCCCCccCeEEEEECC-EEEEEeeeecCCCCCCCCCeEEEEeCCC
Q 030026 99 EEWLCILTMDPEG--KQSQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVING-KLVVMAGYSVIDGTASASADVYQYDSCL 175 (184)
Q Consensus 99 ~~~lyv~gg~~~~--~~~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~v~~ydp~t 175 (184)
...+|+....... ....+.++|+.+.+....-+.... ..+. ...-++ .+|+.++. ...+.+||+.+
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~-~~s~dg~~l~v~~~~---------~~~v~~~d~~~ 120 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK-PFGA-TINNTTQTLWFGNTV---------NSAVTAIDAKT 120 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC-CCSE-EEETTTTEEEEEETT---------TTEEEEEETTT
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC-cceE-EECCCCCEEEEEecC---------CCEEEEEeCCC
Confidence 4567776543211 135688999887653322111111 1111 122344 47776542 13577777766
Q ss_pred CC
Q 030026 176 NR 177 (184)
Q Consensus 176 ~~ 177 (184)
++
T Consensus 121 ~~ 122 (353)
T 3vgz_A 121 GE 122 (353)
T ss_dssp CC
T ss_pred Ce
Confidence 54
No 51
>4fmw_A RNA (guanine-9-)-methyltransferase domain-contain protein 2; structural genomics, structural genomics consortium, SGC, RN modification; HET: SAH; 2.00A {Homo sapiens}
Probab=22.21 E-value=32 Score=24.93 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=10.0
Q ss_pred CCEEEEEeeeec
Q 030026 146 NGKLVVMAGYSV 157 (184)
Q Consensus 146 ~~~lyv~GG~~~ 157 (184)
.+++||+||.++
T Consensus 119 ~~~vYIIGGiVD 130 (197)
T 4fmw_A 119 ESKAYVIGGLVD 130 (197)
T ss_dssp TTSEEEEECCCC
T ss_pred CCCEEEEEEEEe
Confidence 468999999875
No 52
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=21.84 E-value=2.9e+02 Score=21.62 Aligned_cols=40 Identities=13% Similarity=0.147 Sum_probs=22.5
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEe
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMA 153 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~G 153 (184)
..++.+|.....-+.+...+......+++++.++.||+..
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 4577777665433333221111123467788889999975
No 53
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=21.10 E-value=2.6e+02 Score=20.85 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=28.0
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
..++.+|.....-+.+.........-+++++.++.||+.... ...|.++|+.++
T Consensus 186 ~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~---------~~~V~~~~~~~g 239 (316)
T 1ijq_A 186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII---------NEAIFSANRLTG 239 (316)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT---------TTEEEEEETTTC
T ss_pred CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC---------CCeEEEEeCCCC
Confidence 467777776433232221111102235677778899997521 235666666544
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=20.60 E-value=1.4e+02 Score=22.40 Aligned_cols=55 Identities=16% Similarity=0.130 Sum_probs=26.5
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEE-ECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCC
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVV-INGKLVVMAGYSVIDGTASASADVYQYDSCLNR 177 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~ 177 (184)
..+.+||..+..|..+..+......-.+++. -++++++.|+.+ ..+.+||..++.
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---------~~v~vwd~~~~~ 88 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---------RNAYVYEKRPDG 88 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---------SSEEEC------
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---------CeEEEEEcCCCC
Confidence 4577888888877777655432111112222 245666666543 246666665554
No 55
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=20.52 E-value=2.3e+02 Score=20.00 Aligned_cols=57 Identities=4% Similarity=-0.049 Sum_probs=31.6
Q ss_pred ccEEEEEeeCCCCCCCceEEeecCCCc-----------eecCCCCCCCCccCeEEEEECC-EEEEEeeeecCCCCCCCCC
Q 030026 99 EEWLCILTMDPEGKQSQWEVLDCFGNR-----------HRLLPLMPGPVKVGFGVVVING-KLVVMAGYSVIDGTASASA 166 (184)
Q Consensus 99 ~~~lyv~gg~~~~~~~~~~~ydp~t~~-----------W~~lp~~p~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~ 166 (184)
++.+|++.| .+.+.||..+++ |..+| . ....+...-++ ++|.+-|.
T Consensus 109 ~g~~yfFkG------~~yw~yd~~~~~v~~gyPk~i~~~~gip---~--~idaAf~~~~~~~~YfFkg~----------- 166 (196)
T 3c7x_A 109 NGKTYFFRG------NKYYRFNEELRAVDSEYPKNIKVWEGIP---E--SPRGSFMGSDEVFTYFYKGN----------- 166 (196)
T ss_dssp TTEEEEEET------TEEEEEETTTTEECTTCSEEGGGSBTCC---S--SCSEEEECTTSSEEEEEETT-----------
T ss_pred CCEEEEEEC------CEEEEEeCCcccccCCCCccHHHCCCcC---C--CcceeEEecCCCEEEEEECC-----------
Confidence 456777765 346788876542 33332 1 12223332344 89998663
Q ss_pred eEEEEeCCCCC
Q 030026 167 DVYQYDSCLNR 177 (184)
Q Consensus 167 ~v~~ydp~t~~ 177 (184)
..++||..+++
T Consensus 167 ~y~r~d~~~~~ 177 (196)
T 3c7x_A 167 KYWKFNNQKLK 177 (196)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCcce
Confidence 36777776543
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=20.50 E-value=1.1e+02 Score=22.65 Aligned_cols=56 Identities=13% Similarity=0.105 Sum_probs=28.3
Q ss_pred CceEEeecCCCceecCCCCCCCCccCeEEEE-ECCEEEEEeeeecCCCCCCCCCeEEEEeCCCCCe
Q 030026 114 SQWEVLDCFGNRHRLLPLMPGPVKVGFGVVV-INGKLVVMAGYSVIDGTASASADVYQYDSCLNRF 178 (184)
Q Consensus 114 ~~~~~ydp~t~~W~~lp~~p~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~~W 178 (184)
..+.+||..+.++..+..+......-..++. -++.+++.|+.+ ..+.+||..++++
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---------g~i~vwd~~~~~~ 86 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---------RNAYVWTLKGRTW 86 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---------SCEEEEEEETTEE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---------CeEEEEECCCCee
Confidence 4688899888765444333221011112222 246666666543 2466666655543
No 57
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=20.44 E-value=2.6e+02 Score=20.47 Aligned_cols=77 Identities=8% Similarity=-0.030 Sum_probs=35.5
Q ss_pred ccEEEEEeeCCCCCCCceEEeecCCCceec-CCCCCCCCccCeEEEE-ECCEEEEEeeeecCCCCCCCCCeEEEEeCCCC
Q 030026 99 EEWLCILTMDPEGKQSQWEVLDCFGNRHRL-LPLMPGPVKVGFGVVV-INGKLVVMAGYSVIDGTASASADVYQYDSCLN 176 (184)
Q Consensus 99 ~~~lyv~gg~~~~~~~~~~~ydp~t~~W~~-lp~~p~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~v~~ydp~t~ 176 (184)
++.+|+...........++.||+.+..... +...... ..-..++. -+|.+|+...... .......+++||+.++
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~---~~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA-YCIDDMVFDSKGGFYFTDFRGY---STNPLGGVYYVSPDFR 172 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC-CCEEEEEECTTSCEEEEECCCB---TTBCCEEEEEECTTSC
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC-CcccceEECCCCCEEEEecccc---ccCCCceEEEEeCCCC
Confidence 345666543221111468899988776542 2211111 11112222 2577887543210 0112346777877665
Q ss_pred Cee
Q 030026 177 RFG 179 (184)
Q Consensus 177 ~W~ 179 (184)
+..
T Consensus 173 ~~~ 175 (333)
T 2dg1_A 173 TVT 175 (333)
T ss_dssp CEE
T ss_pred EEE
Confidence 543
No 58
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=20.24 E-value=4e+02 Score=22.71 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=40.0
Q ss_pred cccEEEEEeeCCCCCCCceEEeecCCC--ceecCCCCCCC--CccCeEEEEECCEEEEEeeeecCCCCCCCCCeEEEEeC
Q 030026 98 LEEWLCILTMDPEGKQSQWEVLDCFGN--RHRLLPLMPGP--VKVGFGVVVINGKLVVMAGYSVIDGTASASADVYQYDS 173 (184)
Q Consensus 98 ~~~~lyv~gg~~~~~~~~~~~ydp~t~--~W~~lp~~p~~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~v~~ydp 173 (184)
.+..||+... ...++++|..+. .|+.-...... .....+-++.++.||+..+... ......++.||.
T Consensus 120 ~~g~v~v~~~-----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~----~~~~g~v~a~D~ 190 (689)
T 1yiq_A 120 WKGKVYVGVL-----DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE----FGVRGYVTAYDA 190 (689)
T ss_dssp ETTEEEEECT-----TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT----TCCBCEEEEEET
T ss_pred ECCEEEEEcc-----CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc----cCCCCEEEEEEC
Confidence 3556666432 146899998775 47754320100 0111233557888887432110 112457888998
Q ss_pred CCCC--eec
Q 030026 174 CLNR--FGS 180 (184)
Q Consensus 174 ~t~~--W~~ 180 (184)
.|++ |+.
T Consensus 191 ~tG~~~W~~ 199 (689)
T 1yiq_A 191 ETGKEAWRF 199 (689)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEe
Confidence 8875 763
Done!