Your job contains 1 sequence.
>030034
MAARNHISRHPDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHA
IDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEV
VQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSELVEARFEIR
YFLG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030034
(184 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035751 - symbol:AT1G55170 "AT1G55170" species... 307 2.2e-27 1
TAIR|locus:2089616 - symbol:AT3G14750 "AT3G14750" species... 258 3.4e-22 1
TAIR|locus:2060848 - symbol:AT2G30120 species:3702 "Arabi... 204 1.8e-16 1
TAIR|locus:2033681 - symbol:AT1G67170 "AT1G67170" species... 193 7.6e-15 1
TAIR|locus:2156146 - symbol:AT5G61920 "AT5G61920" species... 151 7.4e-11 1
MGI|MGI:2388267 - symbol:Ccdc64b "coiled-coil domain cont... 130 8.6e-07 1
RGD|1306729 - symbol:Ccdc64b "coiled-coil domain containi... 127 2.8e-06 1
UNIPROTKB|Q3A9A0 - symbol:CHY_2490 "Conserved domain prot... 110 8.3e-06 1
TIGR_CMR|CHY_2490 - symbol:CHY_2490 "conserved domain pro... 110 8.3e-06 1
RGD|1560960 - symbol:Hook3 "hook homolog 3 (Drosophila)" ... 123 1.9e-05 1
UNIPROTKB|I3LRJ5 - symbol:CCDC64B "Uncharacterized protei... 120 3.1e-05 1
UNIPROTKB|A1A5D9 - symbol:CCDC64B "Bicaudal D-related pro... 117 7.7e-05 1
UNIPROTKB|F1PQQ3 - symbol:HOOK3 "Uncharacterized protein"... 118 9.3e-05 1
UNIPROTKB|Q86VS8 - symbol:HOOK3 "Protein Hook homolog 3" ... 118 9.3e-05 1
UNIPROTKB|F1MA65 - symbol:Hook3 "Protein Hook3" species:1... 117 0.00012 1
MGI|MGI:2443554 - symbol:Hook3 "hook homolog 3 (Drosophil... 117 0.00012 1
UNIPROTKB|J9P9Z1 - symbol:HOOK3 "Uncharacterized protein"... 116 0.00014 1
UNIPROTKB|E1B7Q0 - symbol:HOOK3 "Protein Hook homolog 3" ... 115 0.00023 1
UNIPROTKB|E1BM24 - symbol:CCDC64B "Uncharacterized protei... 110 0.00059 1
>TAIR|locus:2035751 [details] [associations]
symbol:AT1G55170 "AT1G55170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC073944
EMBL:AY084916 EMBL:BT006117 EMBL:AK118721 IPI:IPI00529305
RefSeq:NP_564678.1 UniGene:At.37108 ProteinModelPortal:Q9C717
SMR:Q9C717 PaxDb:Q9C717 PRIDE:Q9C717 EnsemblPlants:AT1G55170.1
GeneID:841960 KEGG:ath:AT1G55170 TAIR:At1g55170 eggNOG:NOG306311
InParanoid:Q9C717 OMA:ELHRMNL PhylomeDB:Q9C717
ProtClustDB:CLSN2688822 ArrayExpress:Q9C717 Genevestigator:Q9C717
Uniprot:Q9C717
Length = 283
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 76/191 (39%), Positives = 117/191 (61%)
Query: 1 MAARNHISRH-PDSARGFRDGP--RPVLTRGLAPMHFHPMTLEEEIEIQ----RR---EM 50
M+ RN I R DS RD P RP L RG + P +L E+++IQ RR E+
Sbjct: 1 MSGRNRIHRDIRDSYHDHRDLPPERPFL-RGPPLLQPPPPSLLEDLQIQEGEIRRQDAEI 59
Query: 51 HRIISENRHAIDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVEL 110
R++S+N DD L+REL A+K+E+HR+ +I LRA+++ RE ++ KLE ++
Sbjct: 60 RRLLSDNHGLADDRMVLERELVAAKEELHRMNLMISDLRAEQDLQLREFSEKRHKLEGDV 119
Query: 111 RASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRS 170
RA E + E QLR EVQKL+ ++EL+ ++ L KD+ +L+++NKQ+ MRA++ ++
Sbjct: 120 RAMESYKKEASQLRGEVQKLDEIKRELSGNVQLLRKDLAKLQSDNKQIPGMRAEVKDLQK 179
Query: 171 ELVEARFEIRY 181
EL+ AR I Y
Sbjct: 180 ELMHARDAIEY 190
>TAIR|locus:2089616 [details] [associations]
symbol:AT3G14750 "AT3G14750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
EMBL:CP002686 EMBL:AY035083 EMBL:AY051034 IPI:IPI00544941
RefSeq:NP_566492.1 UniGene:At.20367 ProteinModelPortal:Q93V84
SMR:Q93V84 PaxDb:Q93V84 PRIDE:Q93V84 EnsemblPlants:AT3G14750.1
GeneID:820703 KEGG:ath:AT3G14750 TAIR:At3g14750 eggNOG:NOG236769
HOGENOM:HOG000242815 InParanoid:Q93V84 OMA:YAENYEH PhylomeDB:Q93V84
ProtClustDB:CLSN2688383 ArrayExpress:Q93V84 Genevestigator:Q93V84
Uniprot:Q93V84
Length = 331
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 55/172 (31%), Positives = 102/172 (59%)
Query: 10 HPDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQR 69
HP R+ V RGL P LE+ + Q +++ ++++N+ + L++
Sbjct: 44 HPSMIDDSREPQFRVDARGLPPQF---SILEDRLAAQNQDVQGLLADNQRLAATHVALKQ 100
Query: 70 ELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQK 129
EL ++ E+ R+ I LRA++E RE++D+ ++ E+ELR + +RAE+ ++RA++++
Sbjct: 101 ELEVAQHELQRIMHYIDSLRAEEEIMMREMYDKSMRSEMELREVDAMRAEIQKIRADIKE 160
Query: 130 LNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSELVEARFEIRY 181
S RQELT+Q+ +T+D+ RL A+ +Q+ + A+I+ + EL AR I Y
Sbjct: 161 FTSGRQELTSQVHLMTQDLARLTADLQQIPTLTAEIENTKQELQRARAAIDY 212
>TAIR|locus:2060848 [details] [associations]
symbol:AT2G30120 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002685
IPI:IPI00938894 RefSeq:NP_001154541.1 UniGene:At.19562
EnsemblPlants:AT2G30120.2 GeneID:817564 KEGG:ath:AT2G30120
OMA:PEANGTH Uniprot:F4IMQ0
Length = 288
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 42/138 (30%), Positives = 84/138 (60%)
Query: 39 LEEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRE 98
LE+ I IQ RE+ ++++N+ + L+ +L +K E+ RL + K++A+ EA RE
Sbjct: 39 LEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAKVRE 98
Query: 99 LFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQL 158
++ L++E E R + + AE+ Q+R++VQ+L S RQEL T++ ++ + + + +
Sbjct: 99 VYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNSDRA 158
Query: 159 IAMRADIDGIRSELVEAR 176
I ++ +I+ +R E+ + R
Sbjct: 159 IEVKLEIEILRGEIRKGR 176
>TAIR|locus:2033681 [details] [associations]
symbol:AT1G67170 "AT1G67170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 EMBL:BT005883
EMBL:AK228253 IPI:IPI00547288 RefSeq:NP_176888.2 UniGene:At.35681
ProteinModelPortal:Q84TD8 SMR:Q84TD8 IntAct:Q84TD8 PRIDE:Q84TD8
EnsemblPlants:AT1G67170.1 GeneID:843037 KEGG:ath:AT1G67170
TAIR:At1g67170 HOGENOM:HOG000005883 InParanoid:Q84TD8 OMA:MESKGRI
PhylomeDB:Q84TD8 ProtClustDB:CLSN2918424 Genevestigator:Q84TD8
Uniprot:Q84TD8
Length = 359
Score = 193 (73.0 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 48/175 (27%), Positives = 95/175 (54%)
Query: 10 HPDSARGFRDGPRPVLTRGLAP---MHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTH 66
HP++ G P +G+ P M P +E++ Q E+ R+ EN+ +
Sbjct: 27 HPETF-GNHGAIPPSAAQGVYPSFNMLPPPEVMEQKFVAQHGELQRLAIENQRLGGTHGS 85
Query: 67 LQRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAE 126
L++EL A++ EI L I +++++E L ++ K+E EL+ SE V+ E+ Q RAE
Sbjct: 86 LRQELAAAQHEIQMLHAQIGSMKSEREQRMMGLAEKVAKMETELQKSEAVKLEMQQARAE 145
Query: 127 VQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSELVEARFEIRY 181
+ L +R+EL +++ LT+++ + ++ +Q+ A+ ++++ +R E + R Y
Sbjct: 146 ARSLVVAREELMSKVHQLTQELQKSRSDVQQIPALMSELENLRQEYQQCRATYDY 200
>TAIR|locus:2156146 [details] [associations]
symbol:AT5G61920 "AT5G61920" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022212
UniGene:At.55672 EMBL:DQ447104 IPI:IPI00520542
RefSeq:NP_001119474.1 RefSeq:NP_200998.1 PRIDE:Q9FH51
EnsemblPlants:AT5G61920.1 EnsemblPlants:AT5G61920.2 GeneID:836313
KEGG:ath:AT5G61920 TAIR:At5g61920 eggNOG:NOG265125
HOGENOM:HOG000090683 InParanoid:Q9FH51 OMA:KAHIRSI PhylomeDB:Q9FH51
ProtClustDB:CLSN2686951 Genevestigator:Q9FH51 Uniprot:Q9FH51
Length = 238
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 8 SRHPDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHL 67
SRH D+ D PR + ++ LE +I +Q E+ R+ ++NR L
Sbjct: 27 SRHHDTISSTSD-PRHLRDHQISLSDI----LENKIAVQAAEIDRLSNDNRKLASSYVAL 81
Query: 68 QRELTASKDEIHRLGQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEV 127
+ +LT + E+ L I K D E R ++ K+E ++ E +R EV E
Sbjct: 82 KEDLTVADREVQGLRAHIRKTETDHEIQIRSTLEKIAKMEGMVKNRENIRREVQSAHIEA 141
Query: 128 QKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSELVEARFE 178
+L R+EL +++K KD+ ++ E + L A +++ ++ E R E
Sbjct: 142 HRLAREREELASKVKLGMKDLKKVCLEAESLEASSQELERLKEEHQRLRKE 192
>MGI|MGI:2388267 [details] [associations]
symbol:Ccdc64b "coiled-coil domain containing 64B"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0017137 "Rab GTPase binding" evidence=IDA] MGI:MGI:2388267
GO:GO:0017137 eggNOG:NOG119169 HOGENOM:HOG000015285
GeneTree:ENSGT00560000077255 CTD:146439 HOVERGEN:HBG107609
OMA:GRLQATH OrthoDB:EOG4F7NKK EMBL:AK133729 EMBL:AK036793
EMBL:BC038613 IPI:IPI00395150 RefSeq:NP_722479.1 UniGene:Mm.59997
HSSP:P01106 ProteinModelPortal:Q8CHW5 STRING:Q8CHW5
PhosphoSite:Q8CHW5 PRIDE:Q8CHW5 Ensembl:ENSMUST00000062967
GeneID:212733 KEGG:mmu:212733 UCSC:uc008asr.1 InParanoid:Q8CHW5
NextBio:373688 Bgee:Q8CHW5 CleanEx:MM_CCDC64B Genevestigator:Q8CHW5
Uniprot:Q8CHW5
Length = 507
Score = 130 (50.8 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 45/161 (27%), Positives = 76/161 (47%)
Query: 22 RPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRL 81
R + RG A + LE ++E R ++ SE + D R L ++ RL
Sbjct: 105 RGLAARG-AEWEARAVELEGDVEALRAQLGEQRSERQ---DSGRERARALGELSEQNLRL 160
Query: 82 GQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQI 141
Q + + ++ REL + + + A + A + L+AE Q L RQ+L QI
Sbjct: 161 SQQLAQASRTEQELQRELDTLRERCQTQALAGAELGARLESLQAENQMLQDRRQDLEAQI 220
Query: 142 KGLTKDV----NRLEAENKQLIAMRADIDGIRSELVEARFE 178
+GL ++V NRL+ +++L+ +R + + EL ARFE
Sbjct: 221 RGLREEVDKGQNRLQTTHEELLLLRRERKEHKLELERARFE 261
>RGD|1306729 [details] [associations]
symbol:Ccdc64b "coiled-coil domain containing 64B" species:10116
"Rattus norvegicus" [GO:0017137 "Rab GTPase binding"
evidence=IEA;ISO] RGD:1306729 EMBL:CH473948 eggNOG:NOG119169
HOGENOM:HOG000015285 GeneTree:ENSGT00560000077255 CTD:146439
HOVERGEN:HBG107609 OMA:GRLQATH OrthoDB:EOG4F7NKK EMBL:BC161878
IPI:IPI00766629 RefSeq:NP_001100452.1 UniGene:Rn.83293
Ensembl:ENSRNOT00000004638 GeneID:302964 KEGG:rno:302964
UCSC:RGD:1306729 NextBio:650398 Genevestigator:B1WBT3
Uniprot:B1WBT3
Length = 507
Score = 127 (49.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 46/162 (28%), Positives = 78/162 (48%)
Query: 22 RPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRL 81
R + RG A + LE ++E R ++ SE + D R L ++ RL
Sbjct: 105 RGLAARG-AEWEARAVELEGDVEALRAQLGEQRSEQQ---DSGRERARALGELSEQNLRL 160
Query: 82 GQIIPKLRADKEAHTRELFD-RGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQ 140
Q + + ++ REL RG + + + A +R + L+AE Q L RQ+L Q
Sbjct: 161 SQQLAQASRTEQELQRELDTLRG-QCQTQALAGAELRTRLESLQAENQMLQDRRQDLEAQ 219
Query: 141 IKGLTKDVN----RLEAENKQLIAMRADIDGIRSELVEARFE 178
I+GL ++V+ RL+ +++L+ +R + + EL ARFE
Sbjct: 220 IRGLREEVDKGQGRLQTTHEELLLLRRERKEHKLELERARFE 261
>UNIPROTKB|Q3A9A0 [details] [associations]
symbol:CHY_2490 "Conserved domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000141 GenomeReviews:CP000141_GR InterPro:IPR009053
SUPFAM:SSF46579 InterPro:IPR010776 Pfam:PF07106 InterPro:IPR013253
Pfam:PF08317 RefSeq:YP_361284.1 ProteinModelPortal:Q3A9A0
GeneID:3727177 KEGG:chy:CHY_2490 PATRIC:21278043 eggNOG:NOG269813
HOGENOM:HOG000131175 OMA:RSDINEM ProtClustDB:CLSK742696
BioCyc:CHYD246194:GJCN-2489-MONOMER Uniprot:Q3A9A0
Length = 155
Score = 110 (43.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 112 ASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSE 171
A E +R+++ ++R E+ +L + EL ++ GL + N L AE +L +A+++G+R+E
Sbjct: 33 AVEELRSDINEMRKEINELRAEVNELRAEVNGLKAETNELRAEMSEL---KAEVNGLRTE 89
Query: 172 LVEARFEI 179
+ E R E+
Sbjct: 90 MNELRTEM 97
Score = 101 (40.6 bits), Expect = 0.00037, P = 0.00037
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 41 EEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRELF 100
+EI+IQ +M +++E H + EL + +I+ + + I +LRA+ E+
Sbjct: 7 DEIKIQINQMSSMLAELIHMVGRTNGAVEEL---RSDINEMRKEINELRAEVNELRAEV- 62
Query: 101 DRGLKLEV-ELRAS-EPVRAEVVQLRAEVQKL----NSSRQELTT---QIKGLTKDVNRL 151
GLK E ELRA ++AEV LR E+ +L N + ++TT +I + KD+ +
Sbjct: 63 -NGLKAETNELRAEMSELKAEVNGLRTEMNELRTEMNEMKNKITTMEDKIAAMEKDIAEI 121
Query: 152 EA 153
+A
Sbjct: 122 KA 123
>TIGR_CMR|CHY_2490 [details] [associations]
symbol:CHY_2490 "conserved domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000141 GenomeReviews:CP000141_GR InterPro:IPR009053
SUPFAM:SSF46579 InterPro:IPR010776 Pfam:PF07106 InterPro:IPR013253
Pfam:PF08317 RefSeq:YP_361284.1 ProteinModelPortal:Q3A9A0
GeneID:3727177 KEGG:chy:CHY_2490 PATRIC:21278043 eggNOG:NOG269813
HOGENOM:HOG000131175 OMA:RSDINEM ProtClustDB:CLSK742696
BioCyc:CHYD246194:GJCN-2489-MONOMER Uniprot:Q3A9A0
Length = 155
Score = 110 (43.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 112 ASEPVRAEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQLIAMRADIDGIRSE 171
A E +R+++ ++R E+ +L + EL ++ GL + N L AE +L +A+++G+R+E
Sbjct: 33 AVEELRSDINEMRKEINELRAEVNELRAEVNGLKAETNELRAEMSEL---KAEVNGLRTE 89
Query: 172 LVEARFEI 179
+ E R E+
Sbjct: 90 MNELRTEM 97
Score = 101 (40.6 bits), Expect = 0.00037, P = 0.00037
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 41 EEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRLGQIIPKLRADKEAHTRELF 100
+EI+IQ +M +++E H + EL + +I+ + + I +LRA+ E+
Sbjct: 7 DEIKIQINQMSSMLAELIHMVGRTNGAVEEL---RSDINEMRKEINELRAEVNELRAEV- 62
Query: 101 DRGLKLEV-ELRAS-EPVRAEVVQLRAEVQKL----NSSRQELTT---QIKGLTKDVNRL 151
GLK E ELRA ++AEV LR E+ +L N + ++TT +I + KD+ +
Sbjct: 63 -NGLKAETNELRAEMSELKAEVNGLRTEMNELRTEMNEMKNKITTMEDKIAAMEKDIAEI 121
Query: 152 EA 153
+A
Sbjct: 122 KA 123
>RGD|1560960 [details] [associations]
symbol:Hook3 "hook homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0000242 "pericentriolar material" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005801 "cis-Golgi network" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0007032 "endosome organization"
evidence=IEA;ISO] [GO:0007040 "lysosome organization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008333 "endosome to lysosome transport"
evidence=IEA;ISO] [GO:0022027 "interkinetic nuclear migration"
evidence=IEA;ISO] [GO:0030897 "HOPS complex" evidence=IEA;ISO]
[GO:0031122 "cytoplasmic microtubule organization"
evidence=IEA;ISO] [GO:0034451 "centriolar satellite"
evidence=IEA;ISO] [GO:0034454 "microtubule anchoring at centrosome"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0045022 "early endosome to late endosome
transport" evidence=IEA;ISO] [GO:0050768 "negative regulation of
neurogenesis" evidence=IEA;ISO] [GO:0051645 "Golgi localization"
evidence=IEA;ISO] [GO:0070695 "FHF complex" evidence=IEA;ISO]
[GO:0071539 "protein localization to centrosome" evidence=IEA;ISO]
[GO:0097150 "neuronal stem cell maintenance" evidence=IEA;ISO]
InterPro:IPR008636 Pfam:PF05622 RGD:1560960 GO:GO:0005794
GO:GO:0051645 GO:GO:0007040 GO:GO:0008333 GO:GO:0000242
GO:GO:0070695 GO:GO:0030897 GO:GO:0045022 GO:GO:0007032
GO:GO:0034451 GO:GO:0031122 GO:GO:0050768 GO:GO:0005801
GO:GO:0034454 GeneTree:ENSGT00690000101702 GO:GO:0022027
GO:GO:0097150 eggNOG:NOG130433 OrthoDB:EOG418BN0 GO:GO:0071539
EMBL:AY310154 IPI:IPI00382322 UniGene:Rn.203282 IntAct:Q7TQ77
Ensembl:ENSRNOT00000019281 UCSC:RGD:1560960 InParanoid:Q7TQ77
Genevestigator:Q7TQ77 Uniprot:Q7TQ77
Length = 709
Score = 123 (48.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/192 (26%), Positives = 87/192 (45%)
Query: 3 ARNHISRHPDSARGFRDGPRPVLTRGLAPM-HFHPM--TLEEEIEIQRREMHRIISENRH 59
A H+ H + G VL PM ++ P +++ I+ E+ + ISE R
Sbjct: 77 AHTHMHSHTHTLTYMHTGKDSVL----GPMGNYRPRLEAAKDDYRIRCEELEKEISELRQ 132
Query: 60 AIDDNTHLQRELTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVELRASEP 115
D+ T L E + KDEI L + KL E++ ++L D G L+ +V+L +
Sbjct: 133 QNDELTTLADEAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKN 192
Query: 116 VR--AEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEAENK-------QLIAMRADID 166
V L E++K N++R +L T + + + NRL E+K + ++ +D
Sbjct: 193 TMYMQNTVSLEEELRKANAARGQLETYKRQVVELQNRLSDESKKADKLDFEYKRLKEKVD 252
Query: 167 GIRSELVEARFE 178
G++ E R E
Sbjct: 253 GLQKEKDRLRTE 264
>UNIPROTKB|I3LRJ5 [details] [associations]
symbol:CCDC64B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017137 "Rab GTPase binding" evidence=IEA]
GeneTree:ENSGT00560000077255 OMA:GRLQATH EMBL:FP312929
Ensembl:ENSSSCT00000031303 Uniprot:I3LRJ5
Length = 508
Score = 120 (47.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 25 LTRGLAPM----HFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHR 80
L RGLA + LE ++E R ++ SE + D R LT ++ R
Sbjct: 87 LRRGLAAQGAEWEARAVELEGDVEALRAQLGEQRSEQQ---DSGRERVRALTELSEQNLR 143
Query: 81 LGQIIPKLRADKEAHTRELFD-RGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTT 139
L Q + + ++ REL RG + + + A +R + L+ E Q L RQ+L +
Sbjct: 144 LSQQLAQASQTEQELQRELDGLRG-QCQAQALAGAELRTRLESLQGENQMLQGRRQDLES 202
Query: 140 QIKGLTKDVN----RLEAENKQLIAMRADIDGIRSELVEARFE 178
QI+GL ++V RL+A +++L+ +R + EL AR E
Sbjct: 203 QIRGLREEVEKGQGRLQATHEELLLLRRERREHSLELERARSE 245
>UNIPROTKB|A1A5D9 [details] [associations]
symbol:CCDC64B "Bicaudal D-related protein 2" species:9606
"Homo sapiens" [GO:0017137 "Rab GTPase binding" evidence=IEA]
eggNOG:NOG119169 HOGENOM:HOG000015285 EMBL:AL833749 EMBL:AC108134
EMBL:BC128602 IPI:IPI00095032 IPI:IPI00783304 RefSeq:NP_001096645.1
UniGene:Hs.513285 ProteinModelPortal:A1A5D9 PhosphoSite:A1A5D9
PaxDb:A1A5D9 PRIDE:A1A5D9 Ensembl:ENST00000389347
Ensembl:ENST00000572449 Ensembl:ENST00000573514 GeneID:146439
KEGG:hsa:146439 UCSC:uc002cte.4 CTD:146439 GeneCards:GC16M003080
H-InvDB:HIX0012754 H-InvDB:HIX0027051 HGNC:HGNC:33584 HPA:HPA043251
neXtProt:NX_A1A5D9 PharmGKB:PA162381686 HOVERGEN:HBG107609
InParanoid:A1A5D9 OMA:GRLQATH OrthoDB:EOG4F7NKK PhylomeDB:A1A5D9
GenomeRNAi:146439 NextBio:85363 Bgee:A1A5D9 CleanEx:HS_CCDC64B
Genevestigator:A1A5D9 Uniprot:A1A5D9
Length = 508
Score = 117 (46.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 47/178 (26%), Positives = 81/178 (45%)
Query: 6 HISRHPDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNT 65
H+ R + + R + RG A + LE ++E R ++ SE + D
Sbjct: 89 HLEREERLQQENHELRRGLAARG-AEWEARAVELEGDVEALRAQLGEQRSEQQ---DSGR 144
Query: 66 HLQRELTASKDEIHRLGQIIPKLRADKEAHTRELFD-RGLKLEVELRASEPVRAEVVQLR 124
R L+ ++ RL Q + + ++ REL RG + + + A +R + L+
Sbjct: 145 ERARALSELSEQNLRLSQQLAQASQTEQELQRELDALRG-QCQAQALAGAELRTRLESLQ 203
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVN----RLEAENKQLIAMRADIDGIRSELVEARFE 178
E Q L S RQ+L QI+GL ++V RL+ +++L+ +R + EL AR E
Sbjct: 204 GENQMLQSRRQDLEAQIRGLREEVEKGEGRLQTTHEELLLLRRERREHSLELERARSE 261
>UNIPROTKB|F1PQQ3 [details] [associations]
symbol:HOOK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR008636
Pfam:PF05622 GO:GO:0005737 GO:GO:0000226
GeneTree:ENSGT00690000101702 CTD:84376 KO:K16536 OMA:TIMMMEE
EMBL:AAEX03010368 RefSeq:XP_532787.2 Ensembl:ENSCAFT00000008696
GeneID:475567 KEGG:cfa:475567 Uniprot:F1PQQ3
Length = 718
Score = 118 (46.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L E
Sbjct: 236 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADE 295
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVELRASEPVR--AEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 296 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 355
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQ 157
E++K N++R +L T + + + NRL E+K+
Sbjct: 356 EELRKANAARSQLETYKRQVVELQNRLSEESKK 388
>UNIPROTKB|Q86VS8 [details] [associations]
symbol:HOOK3 "Protein Hook homolog 3" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0034451 "centriolar
satellite" evidence=IEA] [GO:0097150 "neuronal stem cell
maintenance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0051645 "Golgi localization" evidence=IMP]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
[GO:0005801 "cis-Golgi network" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0007040 "lysosome organization" evidence=IMP] [GO:0045022
"early endosome to late endosome transport" evidence=IMP]
[GO:0008333 "endosome to lysosome transport" evidence=IMP]
[GO:0030897 "HOPS complex" evidence=IDA] [GO:0070695 "FHF complex"
evidence=IDA] [GO:0022027 "interkinetic nuclear migration"
evidence=ISS] [GO:0050768 "negative regulation of neurogenesis"
evidence=ISS] [GO:0071539 "protein localization to centrosome"
evidence=ISS] [GO:0000242 "pericentriolar material" evidence=ISS]
[GO:0005813 "centrosome" evidence=ISS;IDA] [GO:0034454 "microtubule
anchoring at centrosome" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR008636 Pfam:PF05622 GO:GO:0005794 EMBL:CH471080
GO:GO:0015031 GO:GO:0051645 GO:GO:0007040 GO:GO:0008333
GO:GO:0008017 GO:GO:0000242 GO:GO:0070695 GO:GO:0045022
GO:GO:0007032 GO:GO:0034451 GO:GO:0005874 GO:GO:0031122
GO:GO:0050768 GO:GO:0005801 GO:GO:0034454 GO:GO:0022027
GO:GO:0097150 eggNOG:NOG130433 HOGENOM:HOG000294112
HOVERGEN:HBG051920 EMBL:AF241830 EMBL:BC048304 EMBL:BC056146
EMBL:AK090540 IPI:IPI00031768 RefSeq:NP_115786.1 UniGene:Hs.162852
ProteinModelPortal:Q86VS8 SMR:Q86VS8 IntAct:Q86VS8 STRING:Q86VS8
PhosphoSite:Q86VS8 DMDM:41688581 PaxDb:Q86VS8 PRIDE:Q86VS8
Ensembl:ENST00000307602 GeneID:84376 KEGG:hsa:84376 UCSC:uc003xpr.3
CTD:84376 GeneCards:GC08P042769 HGNC:HGNC:23576 HPA:HPA024756
MIM:607825 neXtProt:NX_Q86VS8 PharmGKB:PA134961305
InParanoid:Q86VS8 KO:K16536 OMA:TIMMMEE OrthoDB:EOG418BN0
PhylomeDB:Q86VS8 ChiTaRS:HOOK3 GenomeRNAi:84376 NextBio:74148
Bgee:Q86VS8 CleanEx:HS_HOOK3 Genevestigator:Q86VS8
GermOnline:ENSG00000168172 GO:GO:0071539 Uniprot:Q86VS8
Length = 718
Score = 118 (46.6 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 43/153 (28%), Positives = 71/153 (46%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L E
Sbjct: 236 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADE 295
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVELRASEPVR--AEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 296 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 355
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQ 157
E++K N++R +L T + + + NRL E+K+
Sbjct: 356 EELRKANAARSQLETYKRQVVELQNRLSEESKK 388
>UNIPROTKB|F1MA65 [details] [associations]
symbol:Hook3 "Protein Hook3" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005737 GO:GO:0000226 GeneTree:ENSGT00690000101702
IPI:IPI00782227 Ensembl:ENSRNOT00000019356 ArrayExpress:F1MA65
Uniprot:F1MA65
Length = 699
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L E
Sbjct: 217 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADE 276
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVELRASEPVR--AEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 277 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 336
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENK-------QLIAMRADIDGIRSELVEARF 177
E++K N++R +L T + + + NRL E+K + ++ +DG++ E R
Sbjct: 337 EELRKANAARGQLETYKRQVVELQNRLSDESKKADKLDFEYKRLKEKVDGLQKEKDRLRT 396
Query: 178 E 178
E
Sbjct: 397 E 397
>MGI|MGI:2443554 [details] [associations]
symbol:Hook3 "hook homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000242 "pericentriolar material" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007040 "lysosome organization" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0008333 "endosome to
lysosome transport" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0022027 "interkinetic nuclear migration"
evidence=IMP] [GO:0031122 "cytoplasmic microtubule organization"
evidence=ISO] [GO:0034451 "centriolar satellite" evidence=IDA]
[GO:0034454 "microtubule anchoring at centrosome" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0045022
"early endosome to late endosome transport" evidence=ISO]
[GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
[GO:0051645 "Golgi localization" evidence=ISO] [GO:0070695 "FHF
complex" evidence=ISO] [GO:0071539 "protein localization to
centrosome" evidence=IMP] [GO:0097150 "neuronal stem cell
maintenance" evidence=IMP] InterPro:IPR008636 Pfam:PF05622
MGI:MGI:2443554 GO:GO:0005794 GO:GO:0015031 GO:GO:0051645
GO:GO:0007040 EMBL:CH466580 GO:GO:0008333 GO:GO:0000242
GO:GO:0070695 GO:GO:0030897 GO:GO:0045022 GO:GO:0007032
GO:GO:0034451 GO:GO:0005874 GO:GO:0031122 GO:GO:0050768
GO:GO:0005801 GO:GO:0034454 GeneTree:ENSGT00690000101702
GO:GO:0022027 GO:GO:0097150 eggNOG:NOG130433 HOVERGEN:HBG051920
CTD:84376 KO:K16536 OMA:TIMMMEE OrthoDB:EOG418BN0 GO:GO:0071539
EMBL:AY223806 EMBL:AK042180 EMBL:AK054263 EMBL:AK080377
EMBL:AK084594 EMBL:AK145149 IPI:IPI00987187 RefSeq:NP_997542.1
UniGene:Mm.334464 UniGene:Mm.458186 ProteinModelPortal:Q8BUK6
SMR:Q8BUK6 IntAct:Q8BUK6 STRING:Q8BUK6 PhosphoSite:Q8BUK6
PaxDb:Q8BUK6 PRIDE:Q8BUK6 Ensembl:ENSMUST00000037182 GeneID:320191
KEGG:mmu:320191 UCSC:uc009lhj.2 InParanoid:Q540A0 NextBio:396213
Bgee:Q8BUK6 CleanEx:MM_HOOK3 Genevestigator:Q8BUK6
GermOnline:ENSMUSG00000037234 Uniprot:Q8BUK6
Length = 718
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L E
Sbjct: 236 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADE 295
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVELRASEPVR--AEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 296 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 355
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENK-------QLIAMRADIDGIRSELVEARF 177
E++K N++R +L T + + + NRL E+K + ++ +DG++ E R
Sbjct: 356 EELRKANAARGQLETYKRQVVELQNRLSDESKKADKLDFEYKRLKEKVDGLQKEKDRLRT 415
Query: 178 E 178
E
Sbjct: 416 E 416
>UNIPROTKB|J9P9Z1 [details] [associations]
symbol:HOOK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR008636
Pfam:PF05622 GO:GO:0005737 GO:GO:0000226
GeneTree:ENSGT00690000101702 EMBL:AAEX03010368
Ensembl:ENSCAFT00000048835 Uniprot:J9P9Z1
Length = 625
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 37/124 (29%), Positives = 64/124 (51%)
Query: 40 EEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRL---GQIIPKLRADKEAHT 96
+++ I+ E+ + ISE R D+ T L E + KDEI L + KL E++
Sbjct: 111 KDDYRIRCEELEKEISELRQQNDELTTLADEAQSLKDEIDVLRHSSDKVSKLEGQVESYK 170
Query: 97 RELFDRG-LKLEVELRASEPVR--AEVVQLRAEVQKLNSSRQELTTQIKGLTKDVNRLEA 153
++L D G L+ +V+L + V L E++K N++R +L T + + + NRL
Sbjct: 171 KKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSE 230
Query: 154 ENKQ 157
E+K+
Sbjct: 231 ESKK 234
>UNIPROTKB|E1B7Q0 [details] [associations]
symbol:HOOK3 "Protein Hook homolog 3" species:9913 "Bos
taurus" [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
[GO:0071539 "protein localization to centrosome" evidence=IEA]
[GO:0070695 "FHF complex" evidence=IEA] [GO:0051645 "Golgi
localization" evidence=IEA] [GO:0050768 "negative regulation of
neurogenesis" evidence=IEA] [GO:0045022 "early endosome to late
endosome transport" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0034454 "microtubule anchoring at
centrosome" evidence=IEA] [GO:0034451 "centriolar satellite"
evidence=IEA] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IEA] [GO:0030897 "HOPS complex" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0007040 "lysosome
organization" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0005801 "cis-Golgi network" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0000242
"pericentriolar material" evidence=IEA] InterPro:IPR008636
Pfam:PF05622 GO:GO:0005794 GO:GO:0051645 GO:GO:0007040
GO:GO:0008333 GO:GO:0000242 GO:GO:0070695 GO:GO:0030897
GO:GO:0045022 GO:GO:0007032 GO:GO:0034451 GO:GO:0031122
GO:GO:0050768 GO:GO:0005801 GO:GO:0034454
GeneTree:ENSGT00690000101702 GO:GO:0022027 GO:GO:0097150 CTD:84376
KO:K16536 OMA:TIMMMEE GO:GO:0071539 EMBL:DAAA02060960
EMBL:DAAA02060961 EMBL:DAAA02060962 EMBL:DAAA02060963
EMBL:DAAA02060964 IPI:IPI00728811 RefSeq:NP_001179529.1
UniGene:Bt.72537 Ensembl:ENSBTAT00000010044 GeneID:524648
KEGG:bta:524648 NextBio:20874006 Uniprot:E1B7Q0
Length = 718
Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 11 PDSARGFRDGPRPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRE 70
P+S G R L F +++ I+ E+ + ISE R D+ T L +
Sbjct: 236 PNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADD 295
Query: 71 LTASKDEIHRL---GQIIPKLRADKEAHTRELFDRG-LKLEVELRASEPVR--AEVVQLR 124
+ KDEI L + KL E++ ++L D G L+ +V+L + V L
Sbjct: 296 AQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLE 355
Query: 125 AEVQKLNSSRQELTTQIKGLTKDVNRLEAENKQ 157
E++K N++R +L T + + + NRL E+K+
Sbjct: 356 EELRKANAARSQLETYKRQVVELQNRLSEESKK 388
>UNIPROTKB|E1BM24 [details] [associations]
symbol:CCDC64B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017137 "Rab GTPase binding" evidence=IEA]
GeneTree:ENSGT00560000077255 CTD:146439 OMA:GRLQATH
EMBL:DAAA02057322 IPI:IPI00685819 RefSeq:NP_001192528.1
UniGene:Bt.3933 Ensembl:ENSBTAT00000026537 GeneID:507073
KEGG:bta:507073 NextBio:20867888 Uniprot:E1BM24
Length = 506
Score = 110 (43.8 bits), Expect = 0.00059, P = 0.00059
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 22 RPVLTRGLAPMHFHPMTLEEEIEIQRREMHRIISENRHAIDDNTHLQRELTASKDEIHRL 81
R + RG A + LE ++E R ++ SE + D R L+ ++ RL
Sbjct: 105 RGLAARG-AEWEARAVELERDVEALRAQLGEQRSEQQ---DSGRERARALSELGEQNLRL 160
Query: 82 GQIIPKLRADKEAHTRELFDRGLKLEVELRASEPVRAEVVQLRAEVQKLNSSRQELTTQI 141
Q + + ++ REL + + + A +R + L+ E Q L S RQ+L QI
Sbjct: 161 SQQLAQASQTEQELQRELDSLQGQCQAQALAGAELRTRLESLQGENQMLQSRRQDLEAQI 220
Query: 142 KGLTKDVNR----LEAENKQLIAMRADIDGIRSELVEARFE 178
+GL +++ + L+ +++L+ +R + EL AR E
Sbjct: 221 RGLREELEKGRGKLQVTHEELLLLRRERREHGLELERARSE 261
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 184 184 0.00078 110 3 11 22 0.42 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 502 (53 KB)
Total size of DFA: 123 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.21u 0.12s 25.33t Elapsed: 00:00:01
Total cpu time: 25.22u 0.12s 25.34t Elapsed: 00:00:01
Start: Fri May 10 05:57:09 2013 End: Fri May 10 05:57:10 2013