Query 030035
Match_columns 184
No_of_seqs 333 out of 2456
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:52:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030035.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030035hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2abw_A PDX2 protein, glutamina 99.9 3E-28 1E-32 197.6 9.4 159 1-161 4-173 (227)
2 2iss_D Glutamine amidotransfer 99.9 8.5E-27 2.9E-31 187.0 13.8 153 1-161 21-173 (208)
3 2nv0_A Glutamine amidotransfer 99.9 1.5E-26 5E-31 183.5 14.8 152 1-161 2-153 (196)
4 2ywd_A Glutamine amidotransfer 99.9 3.3E-26 1.1E-30 180.2 13.7 151 1-160 3-154 (191)
5 2ywj_A Glutamine amidotransfer 99.9 7.8E-26 2.7E-30 178.0 14.3 146 1-160 1-147 (186)
6 1q7r_A Predicted amidotransfer 99.9 7.8E-26 2.7E-30 182.9 12.6 151 1-160 24-174 (219)
7 1gpw_B Amidotransferase HISH; 99.9 6.9E-23 2.3E-27 162.9 12.2 146 1-162 1-158 (201)
8 4gud_A Imidazole glycerol phos 99.9 2.2E-22 7.4E-27 160.9 7.5 154 2-162 4-166 (211)
9 1ka9_H Imidazole glycerol phos 99.8 1.8E-20 6E-25 149.1 11.8 151 1-162 3-158 (200)
10 1jvn_A Glutamine, bifunctional 99.8 2.9E-19 9.8E-24 162.3 10.4 150 1-161 5-175 (555)
11 1qdl_B Protein (anthranilate s 99.8 3.9E-18 1.3E-22 135.2 14.2 143 1-162 1-156 (195)
12 2a9v_A GMP synthase; structura 99.7 8.1E-18 2.8E-22 135.3 10.8 142 1-162 14-160 (212)
13 1fy2_A Aspartyl dipeptidase; s 99.7 8.1E-19 2.8E-23 143.1 3.4 149 2-170 33-201 (229)
14 3l7n_A Putative uncharacterize 99.7 4.3E-17 1.5E-21 132.9 12.8 148 1-163 1-162 (236)
15 1o1y_A Conserved hypothetical 99.7 3.2E-17 1.1E-21 134.1 12.0 132 10-162 24-168 (239)
16 1wl8_A GMP synthase [glutamine 99.7 4.6E-17 1.6E-21 128.1 12.2 138 1-162 1-147 (189)
17 3d54_D Phosphoribosylformylgly 99.7 2.3E-16 7.9E-21 125.6 14.9 100 1-112 3-108 (213)
18 1i1q_B Anthranilate synthase c 99.7 2.6E-16 8.8E-21 124.3 14.9 140 1-161 1-150 (192)
19 3uow_A GMP synthetase; structu 99.7 6.3E-17 2.2E-21 147.0 12.7 158 1-162 8-190 (556)
20 3m3p_A Glutamine amido transfe 99.7 4.4E-17 1.5E-21 134.6 9.5 139 1-162 4-158 (250)
21 3tqi_A GMP synthase [glutamine 99.7 1.1E-16 3.9E-21 144.4 11.0 142 2-162 12-165 (527)
22 2vpi_A GMP synthase; guanine m 99.7 9.4E-17 3.2E-21 129.8 8.9 139 2-161 26-170 (218)
23 1gpm_A GMP synthetase, XMP ami 99.6 5.1E-16 1.7E-20 140.1 9.9 139 1-163 8-163 (525)
24 3fij_A LIN1909 protein; 11172J 99.6 5.6E-15 1.9E-19 121.7 14.5 141 13-163 31-198 (254)
25 2ywb_A GMP synthase [glutamine 99.6 9.6E-16 3.3E-20 137.6 7.8 136 3-163 2-146 (503)
26 2vxo_A GMP synthase [glutamine 99.6 2.2E-15 7.7E-20 139.9 7.7 140 2-162 31-176 (697)
27 1a9x_B Carbamoyl phosphate syn 99.6 3E-14 1E-18 124.0 13.1 133 1-160 191-330 (379)
28 2v4u_A CTP synthase 2; pyrimid 99.5 4.7E-16 1.6E-20 130.7 0.5 85 1-90 26-138 (289)
29 1l9x_A Gamma-glutamyl hydrolas 99.5 4.7E-14 1.6E-18 119.8 9.5 87 2-90 32-143 (315)
30 3l4e_A Uncharacterized peptida 99.5 2.4E-14 8.2E-19 115.0 6.3 106 2-107 29-159 (206)
31 3r75_A Anthranilate/para-amino 99.4 2.2E-13 7.6E-18 125.6 10.0 140 1-163 447-597 (645)
32 2w7t_A CTP synthetase, putativ 99.4 3.3E-13 1.1E-17 112.5 5.8 84 2-90 10-115 (273)
33 3ugj_A Phosphoribosylformylgly 99.3 3.8E-12 1.3E-16 124.6 10.5 111 1-118 1048-1177(1303)
34 2vdj_A Homoserine O-succinyltr 99.2 8.6E-11 2.9E-15 99.3 10.9 143 1-163 36-217 (301)
35 1oi4_A Hypothetical protein YH 99.2 6.3E-11 2.2E-15 93.3 9.1 86 1-88 24-135 (193)
36 3nva_A CTP synthase; rossman f 99.1 4.4E-11 1.5E-15 107.4 6.8 84 2-90 295-398 (535)
37 2h2w_A Homoserine O-succinyltr 99.1 2.7E-10 9.1E-15 96.7 11.0 142 1-163 48-228 (312)
38 3l18_A Intracellular protease 99.1 1.9E-10 6.3E-15 88.2 8.7 85 1-87 3-111 (168)
39 2rk3_A Protein DJ-1; parkinson 99.0 1.9E-09 6.6E-14 84.8 8.7 85 2-87 5-115 (197)
40 1vco_A CTP synthetase; tetrame 98.9 5.8E-10 2E-14 101.0 5.6 78 8-90 312-403 (550)
41 4hcj_A THIJ/PFPI domain protei 98.9 1.3E-09 4.4E-14 85.3 6.7 83 3-87 11-117 (177)
42 2ab0_A YAJL; DJ-1/THIJ superfa 98.9 4.7E-09 1.6E-13 83.2 9.7 86 1-87 3-116 (205)
43 2fex_A Conserved hypothetical 98.9 6.7E-09 2.3E-13 81.0 10.3 84 1-87 2-110 (188)
44 4e08_A DJ-1 beta; flavodoxin-l 98.9 9.7E-09 3.3E-13 80.2 10.6 85 2-87 7-116 (190)
45 2vrn_A Protease I, DR1199; cys 98.9 3.9E-09 1.3E-13 82.3 7.8 87 1-88 10-125 (190)
46 1s1m_A CTP synthase; CTP synth 98.9 1.8E-09 6E-14 97.8 5.5 78 8-90 301-391 (545)
47 3er6_A Putative transcriptiona 98.8 5.5E-09 1.9E-13 83.3 6.9 87 2-88 10-125 (209)
48 3noq_A THIJ/PFPI family protei 98.8 1.4E-08 4.9E-13 82.2 7.8 86 1-88 6-114 (231)
49 3mgk_A Intracellular protease/ 98.8 1.1E-08 3.6E-13 81.8 6.7 86 1-88 5-114 (211)
50 3ot1_A 4-methyl-5(B-hydroxyeth 98.7 2.9E-08 9.8E-13 78.9 7.9 85 2-87 11-121 (208)
51 3efe_A THIJ/PFPI family protei 98.7 4.6E-08 1.6E-12 78.0 8.6 84 2-88 7-122 (212)
52 3uk7_A Class I glutamine amido 98.7 4.2E-08 1.4E-12 84.9 8.9 86 1-88 13-138 (396)
53 4gdh_A DJ-1, uncharacterized p 98.7 3.8E-08 1.3E-12 77.6 7.8 87 1-88 5-124 (194)
54 3cne_A Putative protease I; st 98.7 3E-08 1E-12 76.3 6.3 87 1-87 3-120 (175)
55 1vhq_A Enhancing lycopene bios 98.7 3.8E-08 1.3E-12 79.5 7.0 88 1-88 7-150 (232)
56 3uk7_A Class I glutamine amido 98.7 6.3E-08 2.2E-12 83.8 8.8 86 1-88 206-331 (396)
57 3f5d_A Protein YDEA; unknow pr 98.6 6.2E-08 2.1E-12 77.2 7.6 83 2-88 5-110 (206)
58 3l3b_A ES1 family protein; ssg 98.6 8.1E-08 2.8E-12 78.6 8.1 86 2-88 25-168 (242)
59 3ewn_A THIJ/PFPI family protei 98.6 1.1E-07 3.8E-12 78.2 8.4 86 1-88 24-134 (253)
60 3ej6_A Catalase-3; heme, hydro 98.6 5.3E-08 1.8E-12 89.9 7.0 89 1-89 538-648 (688)
61 3gra_A Transcriptional regulat 98.6 7.2E-08 2.5E-12 76.4 6.4 84 1-88 6-118 (202)
62 3ttv_A Catalase HPII; heme ori 98.6 3.5E-08 1.2E-12 91.8 4.9 86 1-89 601-710 (753)
63 1u9c_A APC35852; structural ge 98.6 1.1E-07 3.6E-12 76.0 6.6 86 2-88 7-139 (224)
64 3fse_A Two-domain protein cont 98.5 2.7E-07 9.4E-12 79.7 8.8 86 1-88 11-122 (365)
65 1sy7_A Catalase 1; heme oxidat 98.4 6.2E-07 2.1E-11 83.5 9.5 86 1-87 535-644 (715)
66 3n7t_A Macrophage binding prot 98.3 7.9E-07 2.7E-11 72.9 6.8 50 37-87 105-154 (247)
67 2iuf_A Catalase; oxidoreductas 98.3 4.3E-07 1.5E-11 84.0 5.4 88 1-88 530-649 (688)
68 1rw7_A YDR533CP; alpha-beta sa 98.3 6.7E-07 2.3E-11 72.6 5.7 51 37-88 98-148 (243)
69 3bhn_A THIJ/PFPI domain protei 98.2 8E-07 2.7E-11 72.3 3.9 83 1-87 21-128 (236)
70 3en0_A Cyanophycinase; serine 98.2 1.2E-06 4.3E-11 73.4 4.2 104 2-105 58-189 (291)
71 1n57_A Chaperone HSP31, protei 98.1 2.1E-06 7.1E-11 71.8 5.3 53 35-88 143-195 (291)
72 3kkl_A Probable chaperone prot 98.1 2.2E-06 7.4E-11 70.1 5.2 50 37-87 98-147 (244)
73 2gk3_A Putative cytoplasmic pr 95.5 0.052 1.8E-06 44.0 8.0 73 7-80 37-126 (256)
74 1z0s_A Probable inorganic poly 95.3 0.023 8E-07 47.1 5.3 70 1-81 30-101 (278)
75 2i2c_A Probable inorganic poly 91.6 0.29 1E-05 39.8 5.7 63 1-80 1-70 (272)
76 4e5v_A Putative THUA-like prot 91.1 1.2 4.1E-05 36.5 9.0 61 15-81 25-96 (281)
77 1u0t_A Inorganic polyphosphate 89.1 1.2 4.2E-05 36.7 7.5 69 2-80 6-108 (307)
78 3tty_A Beta-GAL, beta-galactos 88.4 1.3 4.6E-05 40.6 7.9 59 13-78 428-486 (675)
79 2an1_A Putative kinase; struct 88.4 0.34 1.2E-05 39.5 3.6 69 2-80 7-96 (292)
80 1eiw_A Hypothetical protein MT 88.1 1.3 4.3E-05 31.5 6.0 56 14-78 19-74 (111)
81 1t0b_A THUA-like protein; treh 86.6 0.96 3.3E-05 36.5 5.2 60 16-80 38-106 (252)
82 2zuv_A Lacto-N-biose phosphory 86.6 0.81 2.8E-05 42.4 5.2 76 2-79 440-544 (759)
83 2dc1_A L-aspartate dehydrogena 82.7 8 0.00027 30.0 9.0 46 1-47 1-60 (236)
84 1yt5_A Inorganic polyphosphate 79.1 1.1 3.9E-05 35.9 2.8 67 1-80 1-73 (258)
85 3pfn_A NAD kinase; structural 78.3 7.8 0.00027 33.0 7.9 70 2-81 40-142 (365)
86 3l49_A ABC sugar (ribose) tran 76.6 19 0.00063 27.9 9.3 67 2-77 7-92 (291)
87 3kbq_A Protein TA0487; structu 75.2 4.6 0.00016 30.8 5.1 48 1-48 4-73 (172)
88 3rht_A (gatase1)-like protein; 74.6 3.4 0.00012 33.5 4.5 60 13-77 20-85 (259)
89 3l6u_A ABC-type sugar transpor 74.2 23 0.0008 27.3 9.3 67 2-77 10-95 (293)
90 2pjk_A 178AA long hypothetical 72.7 14 0.00047 27.9 7.3 48 1-48 16-92 (178)
91 3eag_A UDP-N-acetylmuramate:L- 72.4 19 0.00066 29.4 8.7 78 1-79 5-115 (326)
92 2raf_A Putative dinucleotide-b 71.9 23 0.00078 26.9 8.5 71 1-80 20-92 (209)
93 4hv4_A UDP-N-acetylmuramate--L 70.8 16 0.00054 31.9 8.2 77 1-79 23-129 (494)
94 3m9w_A D-xylose-binding peripl 70.2 25 0.00084 27.6 8.7 67 2-77 4-89 (313)
95 2r47_A Uncharacterized protein 68.5 0.33 1.1E-05 36.7 -2.7 43 36-79 83-125 (157)
96 3o9z_A Lipopolysaccaride biosy 68.3 38 0.0013 27.4 9.6 29 1-29 4-33 (312)
97 3g1w_A Sugar ABC transporter; 67.2 31 0.0011 26.8 8.6 67 2-77 6-92 (305)
98 3oa2_A WBPB; oxidoreductase, s 66.5 41 0.0014 27.3 9.4 29 1-29 4-33 (318)
99 3rot_A ABC sugar transporter, 65.5 36 0.0012 26.5 8.7 67 2-77 5-92 (297)
100 3ksm_A ABC-type sugar transpor 65.4 42 0.0014 25.4 9.2 67 2-77 2-90 (276)
101 3uug_A Multiple sugar-binding 64.0 45 0.0015 26.2 9.1 67 2-77 5-90 (330)
102 3iwt_A 178AA long hypothetical 63.6 11 0.00037 28.1 5.0 35 15-49 45-93 (178)
103 3nbm_A PTS system, lactose-spe 62.8 35 0.0012 23.6 7.6 68 1-78 7-85 (108)
104 2qv7_A Diacylglycerol kinase D 62.7 22 0.00075 29.2 7.1 49 2-50 26-93 (337)
105 2pln_A HP1043, response regula 60.6 25 0.00085 23.7 6.2 67 2-79 20-94 (137)
106 1y5e_A Molybdenum cofactor bio 60.6 8.6 0.00029 28.7 3.9 49 1-49 14-84 (169)
107 1f4p_A Flavodoxin; electron tr 60.5 28 0.00094 24.4 6.5 44 1-44 1-55 (147)
108 4ew6_A D-galactose-1-dehydroge 59.8 23 0.00077 29.0 6.7 45 1-46 26-90 (330)
109 3lk7_A UDP-N-acetylmuramoylala 59.8 22 0.00076 30.4 6.9 29 2-30 11-39 (451)
110 3f6r_A Flavodoxin; FMN binding 58.9 29 0.001 24.3 6.5 44 1-44 2-56 (148)
111 2fn9_A Ribose ABC transporter, 58.8 59 0.002 24.9 9.6 46 2-47 4-68 (290)
112 3b6i_A Flavoprotein WRBA; flav 58.6 28 0.00097 25.5 6.6 44 1-44 2-75 (198)
113 4ici_A Putative flavoprotein; 58.0 17 0.00057 26.9 5.1 30 1-30 14-46 (171)
114 2a5l_A Trp repressor binding p 57.4 38 0.0013 24.8 7.1 30 1-30 6-41 (200)
115 3o74_A Fructose transport syst 56.9 51 0.0017 24.9 8.0 67 2-78 4-89 (272)
116 8abp_A L-arabinose-binding pro 56.8 61 0.0021 25.0 8.6 68 2-78 4-89 (306)
117 3euw_A MYO-inositol dehydrogen 56.6 33 0.0011 27.8 7.2 28 1-29 5-34 (344)
118 2x0j_A Malate dehydrogenase; o 56.4 36 0.0012 27.8 7.3 15 33-47 65-79 (294)
119 2x7x_A Sensor protein; transfe 55.6 74 0.0025 25.1 9.3 67 2-77 8-93 (325)
120 3dfu_A Uncharacterized protein 54.7 6.5 0.00022 31.3 2.4 44 1-45 7-51 (232)
121 2vk2_A YTFQ, ABC transporter p 53.8 56 0.0019 25.4 8.0 68 1-77 3-89 (306)
122 3h75_A Periplasmic sugar-bindi 53.6 60 0.002 25.9 8.2 68 1-78 4-93 (350)
123 3pzy_A MOG; ssgcid, seattle st 53.3 14 0.00048 27.5 4.0 49 1-49 8-78 (164)
124 2fvy_A D-galactose-binding per 53.1 76 0.0026 24.4 9.5 68 2-78 4-91 (309)
125 1rtt_A Conserved hypothetical 53.0 19 0.00066 26.7 4.8 30 1-30 7-43 (193)
126 3u3x_A Oxidoreductase; structu 52.8 95 0.0032 25.5 9.5 28 1-29 27-56 (361)
127 3afo_A NADH kinase POS5; alpha 52.1 4.5 0.00015 34.7 1.1 70 1-80 42-148 (388)
128 2is8_A Molybdopterin biosynthe 51.8 8.7 0.0003 28.5 2.6 49 1-49 2-74 (164)
129 3uuw_A Putative oxidoreductase 51.8 27 0.00094 27.9 5.8 28 1-29 7-37 (308)
130 1mkz_A Molybdenum cofactor bio 51.7 17 0.00057 27.2 4.2 48 1-48 11-80 (172)
131 3tb6_A Arabinose metabolism tr 50.3 82 0.0028 24.0 9.6 71 2-78 17-106 (298)
132 3hly_A Flavodoxin-like domain; 50.1 32 0.0011 24.9 5.5 45 1-45 1-59 (161)
133 3bio_A Oxidoreductase, GFO/IDH 49.8 45 0.0016 26.9 6.9 46 1-47 10-75 (304)
134 3cs3_A Sugar-binding transcrip 49.8 83 0.0028 23.9 9.0 45 2-46 10-66 (277)
135 3gv0_A Transcriptional regulat 49.2 70 0.0024 24.6 7.8 66 2-78 10-96 (288)
136 2ohh_A Type A flavoprotein FPR 48.7 31 0.0011 28.4 5.8 45 1-45 257-315 (404)
137 3e82_A Putative oxidoreductase 48.7 34 0.0011 28.3 6.0 27 2-29 9-38 (364)
138 4h1h_A LMO1638 protein; MCCF-l 48.3 35 0.0012 28.2 6.0 71 2-78 14-114 (327)
139 1xea_A Oxidoreductase, GFO/IDH 48.1 42 0.0014 27.0 6.4 26 1-27 3-31 (323)
140 2bon_A Lipid kinase; DAG kinas 47.9 54 0.0018 26.7 7.1 49 2-50 31-95 (332)
141 2dri_A D-ribose-binding protei 47.9 89 0.003 23.7 9.1 68 1-77 2-88 (271)
142 4had_A Probable oxidoreductase 47.9 37 0.0013 27.5 6.1 28 1-29 24-54 (350)
143 3edo_A Flavoprotein, putative 47.6 29 0.00099 24.8 4.8 30 1-30 4-37 (151)
144 1kwg_A Beta-galactosidase; TIM 47.5 23 0.00079 31.9 5.1 35 13-47 428-462 (645)
145 3soz_A ORF 245 protein, cytopl 47.3 18 0.0006 29.1 3.9 64 15-78 38-118 (248)
146 3q2i_A Dehydrogenase; rossmann 47.2 41 0.0014 27.5 6.3 28 1-29 14-44 (354)
147 2zki_A 199AA long hypothetical 47.1 39 0.0013 24.8 5.7 30 1-30 5-39 (199)
148 2ioy_A Periplasmic sugar-bindi 47.0 94 0.0032 23.7 9.2 67 2-77 3-88 (283)
149 3n8k_A 3-dehydroquinate dehydr 46.8 30 0.001 26.4 4.8 37 12-48 55-106 (172)
150 3hcw_A Maltose operon transcri 46.7 67 0.0023 24.9 7.3 32 16-47 35-78 (295)
151 3o1i_D Periplasmic protein TOR 46.2 62 0.0021 24.9 7.0 66 2-77 7-93 (304)
152 2i0f_A 6,7-dimethyl-8-ribityll 46.2 64 0.0022 24.0 6.6 73 1-74 13-113 (157)
153 3nep_X Malate dehydrogenase; h 45.7 68 0.0023 26.3 7.4 15 33-47 65-79 (314)
154 2q9u_A A-type flavoprotein; fl 45.7 39 0.0013 28.0 6.0 45 1-45 257-315 (414)
155 2hqr_A Putative transcriptiona 45.6 27 0.00093 25.9 4.6 70 1-80 1-77 (223)
156 2rjo_A Twin-arginine transloca 45.6 77 0.0026 25.0 7.6 67 2-77 7-94 (332)
157 2hna_A Protein MIOC, flavodoxi 45.2 19 0.00067 25.4 3.5 45 1-45 2-54 (147)
158 3d4o_A Dipicolinate synthase s 45.1 22 0.00077 28.5 4.3 44 1-44 6-65 (293)
159 3k4h_A Putative transcriptiona 44.3 87 0.003 23.9 7.6 51 16-77 36-98 (292)
160 2h3h_A Sugar ABC transporter, 43.6 1.1E+02 0.0039 23.7 9.1 67 2-77 3-88 (313)
161 2ark_A Flavodoxin; FMN, struct 43.4 38 0.0013 24.9 5.1 44 1-44 5-59 (188)
162 3rc1_A Sugar 3-ketoreductase; 43.0 90 0.0031 25.4 7.8 28 1-29 28-58 (350)
163 4b4o_A Epimerase family protei 42.6 38 0.0013 26.5 5.2 45 1-45 1-59 (298)
164 1czn_A Flavodoxin; FMN binding 42.2 10 0.00035 27.5 1.6 45 1-45 1-54 (169)
165 1ydg_A Trp repressor binding p 42.0 48 0.0017 24.7 5.5 30 1-30 7-42 (211)
166 1tjy_A Sugar transport protein 42.0 1.2E+02 0.0042 23.7 8.3 67 2-77 5-91 (316)
167 1gtz_A 3-dehydroquinate dehydr 41.8 50 0.0017 24.7 5.3 37 12-48 33-84 (156)
168 3klb_A Putative flavoprotein; 41.8 41 0.0014 24.4 5.0 28 2-29 6-36 (162)
169 2p10_A MLL9387 protein; putati 41.7 23 0.00077 29.2 3.7 32 59-90 15-46 (286)
170 2g2c_A Putative molybdenum cof 40.9 15 0.0005 27.3 2.3 49 1-49 6-81 (167)
171 1f0k_A MURG, UDP-N-acetylgluco 40.9 53 0.0018 26.0 5.9 60 7-80 219-283 (364)
172 3nq4_A 6,7-dimethyl-8-ribityll 40.3 1.1E+02 0.0038 22.7 7.8 73 1-74 13-112 (156)
173 3evn_A Oxidoreductase, GFO/IDH 40.2 71 0.0024 25.7 6.6 28 1-29 6-35 (329)
174 2vzf_A NADH-dependent FMN redu 39.8 4.4 0.00015 30.7 -0.8 30 1-30 3-41 (197)
175 2pbq_A Molybdenum cofactor bio 39.8 29 0.00098 26.0 3.8 49 1-49 6-80 (178)
176 1f06_A MESO-diaminopimelate D- 39.8 53 0.0018 26.7 5.8 46 1-47 4-68 (320)
177 3jy6_A Transcriptional regulat 39.5 1.2E+02 0.0042 22.9 8.8 65 2-78 9-92 (276)
178 1uqr_A 3-dehydroquinate dehydr 38.8 1.1E+02 0.0036 22.9 6.7 37 12-48 28-79 (154)
179 1ag9_A Flavodoxin; electron tr 38.2 8.4 0.00029 28.5 0.6 45 1-45 1-53 (175)
180 3e9m_A Oxidoreductase, GFO/IDH 38.0 63 0.0022 26.1 6.0 28 1-29 6-35 (330)
181 2p2s_A Putative oxidoreductase 38.0 1.5E+02 0.0053 23.6 10.0 28 1-29 5-34 (336)
182 3d02_A Putative LACI-type tran 38.0 1.3E+02 0.0046 22.9 9.2 67 2-77 6-92 (303)
183 1gud_A ALBP, D-allose-binding 37.9 1.3E+02 0.0044 23.1 7.7 67 2-77 3-90 (288)
184 3kke_A LACI family transcripti 37.9 1.4E+02 0.0047 23.1 8.5 66 2-78 17-101 (303)
185 3brs_A Periplasmic binding pro 37.6 79 0.0027 24.1 6.3 46 2-47 7-75 (289)
186 1uc8_A LYSX, lysine biosynthes 37.5 63 0.0022 24.7 5.7 44 2-45 1-56 (280)
187 1tlt_A Putative oxidoreductase 37.3 74 0.0025 25.4 6.2 28 1-29 6-36 (319)
188 3hn7_A UDP-N-acetylmuramate-L- 37.2 47 0.0016 29.1 5.3 79 1-79 20-129 (524)
189 3m2t_A Probable dehydrogenase; 37.0 48 0.0016 27.3 5.1 27 2-29 7-36 (359)
190 3gdo_A Uncharacterized oxidore 36.9 87 0.003 25.6 6.7 27 2-29 7-36 (358)
191 3k9c_A Transcriptional regulat 36.9 1.3E+02 0.0044 23.1 7.5 45 2-47 14-76 (289)
192 3egc_A Putative ribose operon 36.9 1E+02 0.0035 23.5 6.9 46 2-47 10-74 (291)
193 3db2_A Putative NADPH-dependen 36.6 39 0.0013 27.6 4.5 28 1-29 6-35 (354)
194 2fep_A Catabolite control prot 35.9 1.5E+02 0.005 22.7 9.4 45 2-46 18-81 (289)
195 4eys_A MCCC family protein; MC 35.7 83 0.0028 26.1 6.4 49 2-50 7-87 (346)
196 2c92_A 6,7-dimethyl-8-ribityll 35.7 1.4E+02 0.0046 22.3 7.4 75 1-76 18-115 (160)
197 3kux_A Putative oxidoreductase 35.3 88 0.003 25.4 6.5 28 1-29 8-38 (352)
198 4gqa_A NAD binding oxidoreduct 35.0 46 0.0016 27.8 4.8 21 1-22 27-48 (412)
199 3m6m_D Sensory/regulatory prot 34.9 1E+02 0.0036 20.8 6.1 70 1-79 15-98 (143)
200 3gt7_A Sensor protein; structu 34.7 64 0.0022 22.2 4.9 42 2-43 9-57 (154)
201 3fhl_A Putative oxidoreductase 34.6 1.1E+02 0.0037 25.0 7.0 27 2-29 7-36 (362)
202 3e18_A Oxidoreductase; dehydro 34.4 49 0.0017 27.2 4.8 27 2-29 7-35 (359)
203 2iz6_A Molybdenum cofactor car 34.3 47 0.0016 25.0 4.3 32 37-79 107-139 (176)
204 2ho3_A Oxidoreductase, GFO/IDH 34.3 68 0.0023 25.7 5.6 28 1-29 2-31 (325)
205 2rir_A Dipicolinate synthase, 33.9 46 0.0016 26.6 4.4 44 1-44 8-67 (300)
206 1oju_A MDH, malate dehydrogena 33.5 1.3E+02 0.0045 24.3 7.2 16 32-47 64-79 (294)
207 3ezy_A Dehydrogenase; structur 33.5 50 0.0017 26.8 4.7 28 1-29 3-32 (344)
208 2f00_A UDP-N-acetylmuramate--L 32.9 1.7E+02 0.0058 25.1 8.2 30 1-30 20-50 (491)
209 1jlj_A Gephyrin; globular alph 32.6 34 0.0012 26.0 3.2 49 1-49 15-90 (189)
210 1jr2_A Uroporphyrinogen-III sy 32.5 51 0.0017 26.1 4.4 47 1-47 22-86 (286)
211 3sr3_A Microcin immunity prote 32.3 72 0.0025 26.4 5.5 29 2-30 15-51 (336)
212 3clk_A Transcription regulator 32.0 1.6E+02 0.0054 22.4 7.3 46 2-47 10-75 (290)
213 3tla_A MCCF; serine protease, 32.0 90 0.0031 26.3 6.1 29 2-30 45-81 (371)
214 1iow_A DD-ligase, DDLB, D-ALA\ 32.0 84 0.0029 24.4 5.7 42 1-43 3-60 (306)
215 4hkt_A Inositol 2-dehydrogenas 31.9 78 0.0027 25.4 5.6 28 1-29 4-33 (331)
216 1j6u_A UDP-N-acetylmuramate-al 31.8 85 0.0029 26.9 6.0 29 19-47 53-81 (469)
217 1c2y_A Protein (lumazine synth 31.5 1.3E+02 0.0044 22.3 6.2 74 1-75 14-112 (156)
218 1rcu_A Conserved hypothetical 31.1 56 0.0019 25.1 4.3 35 37-82 118-154 (195)
219 3ip3_A Oxidoreductase, putativ 30.9 80 0.0027 25.5 5.5 28 1-29 3-30 (337)
220 3rqz_A Metallophosphoesterase; 30.8 50 0.0017 25.4 4.1 32 1-45 4-36 (246)
221 2iks_A DNA-binding transcripti 30.3 1.7E+02 0.0058 22.3 7.2 46 2-47 22-86 (293)
222 1lss_A TRK system potassium up 29.6 67 0.0023 21.5 4.2 29 1-30 5-34 (140)
223 2uyg_A 3-dehydroquinate dehydr 29.5 1.5E+02 0.005 21.9 6.1 37 12-48 26-78 (149)
224 3moi_A Probable dehydrogenase; 29.5 62 0.0021 26.8 4.6 29 1-29 3-33 (387)
225 3ohs_X Trans-1,2-dihydrobenzen 29.3 76 0.0026 25.5 5.1 28 1-29 3-34 (334)
226 2r85_A PURP protein PF1517; AT 29.3 66 0.0023 25.4 4.7 30 1-31 3-32 (334)
227 2yq5_A D-isomer specific 2-hyd 29.2 84 0.0029 26.1 5.4 45 1-45 2-53 (343)
228 1p3d_A UDP-N-acetylmuramate--a 29.1 1.8E+02 0.006 24.8 7.6 30 1-30 19-49 (475)
229 2bmv_A Flavodoxin; electron tr 29.0 18 0.00063 26.1 1.1 43 1-44 2-51 (164)
230 2glx_A 1,5-anhydro-D-fructose 28.8 1.2E+02 0.004 24.1 6.1 28 1-29 1-30 (332)
231 1qkk_A DCTD, C4-dicarboxylate 28.8 1.4E+02 0.0047 20.2 6.0 71 1-79 4-83 (155)
232 2dfj_A Diadenosinetetraphospha 28.8 67 0.0023 25.7 4.6 24 1-24 1-25 (280)
233 1di6_A MOGA, molybdenum cofact 28.3 32 0.0011 26.3 2.5 48 1-48 4-77 (195)
234 1gqo_A Dehydroquinase; dehydra 28.1 1.1E+02 0.0038 22.4 5.2 37 12-48 27-78 (143)
235 3hv2_A Response regulator/HD d 28.1 1E+02 0.0035 20.9 5.1 68 2-79 16-94 (153)
236 4eg0_A D-alanine--D-alanine li 28.1 1.3E+02 0.0044 23.9 6.2 42 1-43 14-71 (317)
237 4es6_A Uroporphyrinogen-III sy 27.8 37 0.0013 26.3 2.8 46 1-46 7-67 (254)
238 3cg0_A Response regulator rece 27.7 1.2E+02 0.0041 19.9 5.2 68 2-79 11-90 (140)
239 3dzv_A 4-methyl-5-(beta-hydrox 27.7 1.5E+02 0.005 23.8 6.4 57 13-75 30-92 (273)
240 1jg7_A BGT, DNA beta-glucosylt 27.6 71 0.0024 25.8 4.3 44 1-44 1-65 (351)
241 2yxb_A Coenzyme B12-dependent 27.5 44 0.0015 24.5 3.0 62 2-66 20-95 (161)
242 3cea_A MYO-inositol 2-dehydrog 27.4 1.6E+02 0.0054 23.5 6.7 28 1-29 9-39 (346)
243 1ccw_A Protein (glutamate muta 27.4 36 0.0012 24.2 2.5 76 2-82 5-94 (137)
244 1gsa_A Glutathione synthetase; 27.3 71 0.0024 24.8 4.5 30 1-30 2-39 (316)
245 2hsg_A Glucose-resistance amyl 27.3 1.7E+02 0.0057 23.0 6.7 45 2-46 62-125 (332)
246 3c1a_A Putative oxidoreductase 27.0 93 0.0032 24.7 5.2 28 1-29 11-40 (315)
247 3d8u_A PURR transcriptional re 26.5 2E+02 0.0069 21.4 7.3 45 2-46 5-68 (275)
248 3ldh_A Lactate dehydrogenase; 26.4 1.3E+02 0.0046 24.8 6.1 16 31-46 83-98 (330)
249 1hqk_A 6,7-dimethyl-8-ribityll 26.4 1.9E+02 0.0067 21.2 7.4 85 1-86 13-127 (154)
250 3tri_A Pyrroline-5-carboxylate 26.3 1.5E+02 0.005 23.4 6.2 73 1-81 4-101 (280)
251 3kjx_A Transcriptional regulat 26.2 2.3E+02 0.0079 22.2 7.5 65 2-77 70-153 (344)
252 4e5s_A MCCFLIKE protein (BA_56 26.2 91 0.0031 25.7 5.0 71 2-78 14-114 (331)
253 1lc0_A Biliverdin reductase A; 26.2 1.7E+02 0.0058 23.1 6.6 28 1-29 8-40 (294)
254 3abi_A Putative uncharacterize 26.0 1.7E+02 0.0059 23.8 6.8 27 1-29 17-44 (365)
255 3d7n_A Flavodoxin, WRBA-like p 26.0 46 0.0016 24.7 2.9 45 1-45 7-62 (193)
256 4amg_A Snogd; transferase, pol 26.0 90 0.0031 25.1 5.0 31 1-31 23-58 (400)
257 3mw8_A Uroporphyrinogen-III sy 25.6 68 0.0023 24.5 4.0 46 1-46 2-59 (240)
258 3huu_A Transcription regulator 25.6 1.5E+02 0.005 22.9 6.0 51 16-77 50-112 (305)
259 1g8l_A Molybdopterin biosynthe 25.3 53 0.0018 28.1 3.5 34 15-48 209-254 (411)
260 2d00_A V-type ATP synthase sub 25.2 99 0.0034 21.3 4.4 28 1-32 4-31 (109)
261 3tz6_A Aspartate-semialdehyde 24.8 2.3E+02 0.0079 23.4 7.4 46 1-46 2-72 (344)
262 3d1l_A Putative NADP oxidoredu 24.8 1E+02 0.0035 23.7 4.9 73 1-81 11-105 (266)
263 3l5o_A Uncharacterized protein 24.3 43 0.0015 27.2 2.6 41 2-46 143-195 (270)
264 1uz5_A MOEA protein, 402AA lon 24.2 51 0.0018 28.1 3.2 36 15-50 212-259 (402)
265 3rst_A Signal peptide peptidas 24.2 75 0.0026 24.8 4.0 23 60-82 67-94 (240)
266 1di0_A Lumazine synthase; tran 24.2 1.2E+02 0.004 22.5 4.9 73 2-75 12-110 (158)
267 3lwz_A 3-dehydroquinate dehydr 24.1 1.2E+02 0.0042 22.5 4.9 37 12-48 34-85 (153)
268 1j5p_A Aspartate dehydrogenase 24.1 2.2E+02 0.0074 22.7 6.7 68 1-81 13-94 (253)
269 3bbl_A Regulatory protein of L 24.1 2.4E+02 0.0081 21.4 7.9 31 16-46 31-73 (287)
270 1obo_A Flavodoxin; electron tr 24.0 68 0.0023 22.9 3.5 44 1-44 2-53 (169)
271 3vku_A L-LDH, L-lactate dehydr 23.9 2.4E+02 0.0081 23.1 7.2 15 33-47 72-86 (326)
272 1ks9_A KPA reductase;, 2-dehyd 23.9 1E+02 0.0035 23.7 4.8 29 1-30 1-30 (291)
273 3h5o_A Transcriptional regulat 23.9 2.6E+02 0.009 21.9 8.6 78 2-90 64-175 (339)
274 2o20_A Catabolite control prot 23.9 2.6E+02 0.0089 21.8 9.0 45 2-46 65-128 (332)
275 1g5b_A Serine/threonine protei 23.8 88 0.003 23.4 4.3 35 1-45 13-48 (221)
276 1y80_A Predicted cobalamin bin 23.8 1.2E+02 0.0043 22.6 5.1 62 2-66 90-165 (210)
277 3hzh_A Chemotaxis response reg 23.7 1.2E+02 0.0042 20.7 4.8 70 2-79 38-119 (157)
278 1zh8_A Oxidoreductase; TM0312, 23.6 1.7E+02 0.0058 23.5 6.3 29 1-29 19-50 (340)
279 2ov6_A V-type ATP synthase sub 23.4 1.1E+02 0.0038 20.6 4.3 29 1-33 1-30 (101)
280 3e3m_A Transcriptional regulat 23.4 2.8E+02 0.0095 21.9 9.2 65 2-77 72-155 (355)
281 4hb7_A Dihydropteroate synthas 23.2 38 0.0013 27.6 2.0 15 15-29 117-131 (270)
282 3brq_A HTH-type transcriptiona 23.0 2.4E+02 0.0083 21.1 9.2 45 2-46 21-86 (296)
283 2obx_A DMRL synthase 1, 6,7-di 22.6 1.3E+02 0.0046 22.2 4.9 74 1-75 12-111 (157)
284 2oho_A Glutamate racemase; iso 22.6 2.7E+02 0.0093 21.8 7.2 28 2-29 120-151 (273)
285 1zl0_A Hypothetical protein PA 22.5 89 0.0031 25.7 4.3 29 2-30 19-52 (311)
286 3f6p_A Transcriptional regulat 22.3 1.6E+02 0.0056 18.9 5.4 67 2-79 4-81 (120)
287 1rvv_A Riboflavin synthase; tr 22.3 2.4E+02 0.0081 20.8 7.4 75 1-76 13-114 (154)
288 3t6k_A Response regulator rece 22.1 1.8E+02 0.0061 19.2 5.4 69 2-79 6-86 (136)
289 3gfs_A FMN-dependent NADPH-azo 22.0 67 0.0023 23.2 3.1 29 1-29 1-34 (174)
290 3oti_A CALG3; calicheamicin, T 21.8 1.1E+02 0.0037 24.8 4.7 44 1-45 21-74 (398)
291 3qk7_A Transcriptional regulat 21.7 2.7E+02 0.0092 21.2 9.1 52 16-78 33-95 (294)
292 1d3y_A DNA topoisomerase VI A 21.3 1.2E+02 0.0042 24.7 4.9 43 38-87 146-194 (301)
293 1h6d_A Precursor form of gluco 21.3 1.6E+02 0.0056 24.7 5.9 26 1-27 84-112 (433)
294 3e61_A Putative transcriptiona 21.2 2.4E+02 0.0082 21.1 6.4 63 2-77 10-92 (277)
295 2rgy_A Transcriptional regulat 21.1 2.8E+02 0.0094 21.0 9.6 46 2-47 10-77 (290)
296 2vyc_A Biodegradative arginine 20.9 3.5E+02 0.012 24.7 8.3 77 1-82 1-96 (755)
297 3nxk_A Cytoplasmic L-asparagin 20.7 61 0.0021 27.0 2.9 35 37-77 245-280 (334)
298 1ehs_A STB, heat-stable entero 20.7 14 0.00049 21.4 -0.7 14 74-87 32-45 (48)
299 3s40_A Diacylglycerol kinase; 20.6 2.1E+02 0.0071 22.8 6.1 49 2-50 10-76 (304)
300 3dbi_A Sugar-binding transcrip 20.5 3.1E+02 0.011 21.4 8.7 45 2-46 63-128 (338)
301 1o7j_A L-asparaginase; atomic 20.3 70 0.0024 26.5 3.2 35 37-77 241-276 (327)
302 2l69_A Rossmann 2X3 fold prote 20.2 41 0.0014 23.3 1.4 34 1-34 1-37 (134)
303 2vvt_A Glutamate racemase; iso 20.1 2.2E+02 0.0074 22.7 6.1 26 2-27 132-161 (290)
No 1
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.95 E-value=3e-28 Score=197.59 Aligned_cols=159 Identities=39% Similarity=0.682 Sum_probs=128.8
Q ss_pred CEEEEEecCCCHHHHHHHHHHC---CCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhc--CChHHHHHHHHHc-CCcE
Q 030035 1 MVVGVLALQGSFNEHIAALKRL---GVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEY--HNLFPALREFVKM-GKPV 74 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~---G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~--~~l~~~l~~~~~~-g~Pv 74 (184)
|||||++++|++.++.++|+++ |++++.++.+++++++|+||||||.++.+..+.++ .++.+.|++++++ |+||
T Consensus 4 ~~I~Il~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~l~~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~Pi 83 (227)
T 2abw_A 4 ITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPI 83 (227)
T ss_dssp EEEEEECTTSCCHHHHHHHHTTCCTTEEEEEECSHHHHHTCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCE
T ss_pred cEEEEEeCCCCcHHHHHHHHHhccCCeEEEEEcCccccccCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEE
Confidence 5899999999999999999999 99999998776788899999999987777655442 3578899999999 9999
Q ss_pred EEEchHHHHHHHhhhcccCC----CccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEec
Q 030035 75 WGTCAGLIFLANKAVGQKLG----GQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV 150 (184)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~----~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~ 150 (184)
||||+|||+|++++.+.... ..+++|++++++.++.+|++..++..++.++++.. .....|+.+|+|+++|.++
T Consensus 84 lGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~g~~~~~~~~h~~~v~~~ 161 (227)
T 2abw_A 84 WGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSS--AFKKDLTAACIRAPYIREI 161 (227)
T ss_dssp EEETHHHHHTEEEEECCCSCCTTGGGSCCCCEEEEEECCC----CCEEEEECEECCCCT--TCCTTCEEEEESCCEEEEE
T ss_pred EEECHHHHHHHHHhcCCccccccccccccCceeEEEEecCCCccccccccccccccccc--cCCCceeEEEEEcceEeec
Confidence 99999999999998764211 17899999999999999999888876666666520 0124789999999999998
Q ss_pred -CCCcEEEEecC
Q 030035 151 -GPDVDVLADYP 161 (184)
Q Consensus 151 -~~~v~vLa~~~ 161 (184)
|++.+++|+.+
T Consensus 162 ~~~~~~vla~~~ 173 (227)
T 2abw_A 162 LSDEVKVLATFS 173 (227)
T ss_dssp CCTTCEEEEEEE
T ss_pred CCCCcEEEEEcc
Confidence 99999999985
No 2
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.94 E-value=8.5e-27 Score=187.04 Aligned_cols=153 Identities=44% Similarity=0.777 Sum_probs=131.2
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
|||+|+.+.|+|.++.++|++.|+++++++..++++++|+||||||.++.++.+.+...+.+.|++++++++|+||||+|
T Consensus 21 ~~I~ii~~~~~~~~~~~~l~~~g~~~~~~~~~~~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G 100 (208)
T 2iss_D 21 MKIGVLGVQGDVREHVEALHKLGVETLIVKLPEQLDMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAG 100 (208)
T ss_dssp CEEEEECSSSCHHHHHHHHHHTTCEEEEECSGGGGGGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred cEEEEEECCCchHHHHHHHHHCCCEEEEeCChHHHhhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHH
Confidence 68999999999999999999999999999887778899999999998777766665567889999999999999999999
Q ss_pred HHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcEEEEec
Q 030035 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVDVLADY 160 (184)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~vLa~~ 160 (184)
+|+|++++++. ..+++|++++++.++.+|++..++.....+++++|+ +|+..++|.+.+..+|++.+++|+.
T Consensus 101 ~QlL~~~~gg~---~~~~lg~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~~~~~~~v~a~~ 172 (208)
T 2iss_D 101 VILLAKRIKNY---SQEKLGVLDITVERNAYGRQVESFETFVEIPAVGKD-----PFRAIFIRAPRIVETGKNVEILATY 172 (208)
T ss_dssp HHHHEEEEC------CCCCCCEEEEEETTTTCSGGGCEEEEECCGGGCSS-----CEEEEESSCCEEEEECSSCEEEEEE
T ss_pred HHHHHHHcCCC---CCCCccccceEEEecCCCcccccccCCcccccCCCC-----ceEEEEEeCcccccCCCCcEEEEEE
Confidence 99999999752 468999999999999888877666544456777663 6899999999999989999999987
Q ss_pred C
Q 030035 161 P 161 (184)
Q Consensus 161 ~ 161 (184)
+
T Consensus 173 d 173 (208)
T 2iss_D 173 D 173 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 3
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.94 E-value=1.5e-26 Score=183.48 Aligned_cols=152 Identities=48% Similarity=0.861 Sum_probs=128.9
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
|||+|+.++|+|.++.++|+++|++++.++..++++++|+||||||.++.++.+.+..++.+.|+++.++++|++|||+|
T Consensus 2 m~I~il~~~~~~~~~~~~l~~~g~~~~~~~~~~~l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G 81 (196)
T 2nv0_A 2 LTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAG 81 (196)
T ss_dssp CEEEEECSSSCCHHHHHHHHHTTCEEEEECSGGGGGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHH
T ss_pred cEEEEEEccCCcHHHHHHHHHCCCEEEEeCChHHHhhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHH
Confidence 79999999999999999999999999999877778899999999998777666666567789999999999999999999
Q ss_pred HHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcEEEEec
Q 030035 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVDVLADY 160 (184)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~vLa~~ 160 (184)
+|+|++++++. ..+++|++++++.++.+|++..+++.+..+++++ ..|+..+.|.+.+.++|++.+++|+.
T Consensus 82 ~q~l~~~~gg~---~~~~lg~~~~~~~~~~~g~~~~~~~~~~~~~~~g------~~~~~~~~h~~~v~~~~~~~~v~a~~ 152 (196)
T 2nv0_A 82 LIILAKEIAGS---DNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLD------EPFTGVFIRAPHILEAGENVEVLSEH 152 (196)
T ss_dssp HHHHSBCCC-------CCCCCSCEEEECCCSCTTTSEEEEEECCTTCS------SCEEEEEESCCEEEEECTTCEEEEEE
T ss_pred HHHHHHHhcCC---CCCcccCCceeEeccCCCcccccccCCcccccCC------CceEEEEEecceecccCCCcEEEEEE
Confidence 99999998753 3578999999999988888876665544455543 47899999999999999999999998
Q ss_pred C
Q 030035 161 P 161 (184)
Q Consensus 161 ~ 161 (184)
+
T Consensus 153 d 153 (196)
T 2nv0_A 153 N 153 (196)
T ss_dssp T
T ss_pred C
Confidence 4
No 4
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=3.3e-26 Score=180.25 Aligned_cols=151 Identities=49% Similarity=0.775 Sum_probs=128.8
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcC-CcEEEEch
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMG-KPVWGTCA 79 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g-~PvlGIC~ 79 (184)
|+|||++++|++.++.++|+++|+++++++.+++++++|+||||||++..++.+.++..+.+.|+++.+++ +|+||||+
T Consensus 3 p~Igi~~~~~~~~~~~~~l~~~G~~~~~~~~~~~l~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~ 82 (191)
T 2ywd_A 3 GVVGVLALQGDFREHKEALKRLGIEAKEVRKKEHLEGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCA 82 (191)
T ss_dssp CCEEEECSSSCHHHHHHHHHTTTCCCEEECSGGGGTTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETH
T ss_pred cEEEEEecCCchHHHHHHHHHCCCEEEEeCChhhhccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECH
Confidence 46999999999999999999999999999887788899999999997666666664557889999999999 99999999
Q ss_pred HHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcEEEEe
Q 030035 80 GLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVDVLAD 159 (184)
Q Consensus 80 G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~vLa~ 159 (184)
|||+|+.++++. +..+++|++++++.++.+|++..+++.+..++++ .++++.+.|+..+.++|++.+++|+
T Consensus 83 G~Q~l~~~~gg~--~~~~~lg~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~Hs~~v~~l~~~~~~~a~ 153 (191)
T 2ywd_A 83 GAIWLAKEIVGY--PEQPRLGVLEAWVERNAFGRQVESFEEDLEVEGL-------GSFHGVFIRAPVFRRLGEGVEVLAR 153 (191)
T ss_dssp HHHHHEEEETTC--TTCCCCCCEEEEEETTCSCCSSSEEEEEEEETTT-------EEEEEEEESCCEEEEECTTCEEEEE
T ss_pred HHHHHHHHhCCC--CCCccccccceEEEcCCcCCccccccccccccCC-------CceeEEEEcccceeccCCCcEEEEE
Confidence 999999998741 2467899999999999889887666544344543 3688999999999889999999999
Q ss_pred c
Q 030035 160 Y 160 (184)
Q Consensus 160 ~ 160 (184)
.
T Consensus 154 ~ 154 (191)
T 2ywd_A 154 L 154 (191)
T ss_dssp E
T ss_pred E
Confidence 8
No 5
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=7.8e-26 Score=177.95 Aligned_cols=146 Identities=39% Similarity=0.684 Sum_probs=123.8
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
|||+||.++|++.++.++|+++|+++++++.+++++++|+||||||+++.++.+.+..++.+.++ +.++|+||||+|
T Consensus 1 m~i~vl~~~g~~~~~~~~l~~~G~~~~~~~~~~~~~~~dglil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G 77 (186)
T 2ywj_A 1 MIIGVLAIQGDVEEHEEAIKKAGYEAKKVKRVEDLEGIDALIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAG 77 (186)
T ss_dssp CEEEEECSSSCCHHHHHHHHHTTSEEEEECSGGGGTTCSEEEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHH
T ss_pred CEEEEEecCcchHHHHHHHHHCCCEEEEECChHHhccCCEEEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHH
Confidence 89999999999999999999999999999877778899999999998877766665556777766 679999999999
Q ss_pred HHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEec-CCCcEEEEe
Q 030035 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV-GPDVDVLAD 159 (184)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~-~~~v~vLa~ 159 (184)
||+|+.+++. ....+|++++++.++.+|++..++..+..++++ .+++..+.|.++|.++ |++.+++|+
T Consensus 78 ~Qll~~~~gg----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~H~~~v~~l~~~~~~v~a~ 146 (186)
T 2ywj_A 78 MVLLSKGTGI----NQILLELMDITVKRNAYGRQVDSFEKEIEFKDL-------GKVYGVFIRAPVVDKILSDDVEVIAR 146 (186)
T ss_dssp HHHHSSCCSS----CCCCCCCSSEEEETTTTCSSSCCEEEEEEETTT-------EEEEEEESSCCEEEEECCTTCEEEEE
T ss_pred HHHHHHHhCC----CcCccCCCceeEEeccCCCcccceecccccccC-------CcEEEEEEecceeeecCCCCeEEEEE
Confidence 9999999742 356799999999988888887666554444544 3688999999999999 999999999
Q ss_pred c
Q 030035 160 Y 160 (184)
Q Consensus 160 ~ 160 (184)
.
T Consensus 147 s 147 (186)
T 2ywj_A 147 D 147 (186)
T ss_dssp E
T ss_pred E
Confidence 8
No 6
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.93 E-value=7.8e-26 Score=182.89 Aligned_cols=151 Identities=49% Similarity=0.848 Sum_probs=128.8
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
|||+|+.+.|+|.+++++|++.|+++++++..++++++|+||||||.++.++.+.+...+.+.|++++++++||||||+|
T Consensus 24 ~~I~il~~~~~~~~~~~~l~~~G~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G 103 (219)
T 1q7r_A 24 MKIGVLGLQGAVREHVRAIEACGAEAVIVKKSEQLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAG 103 (219)
T ss_dssp CEEEEESCGGGCHHHHHHHHHTTCEEEEECSGGGGTTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTH
T ss_pred CEEEEEeCCCCcHHHHHHHHHCCCEEEEECCHHHHhhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHH
Confidence 68999999999999999999999999999887778899999999998777666665556789999999999999999999
Q ss_pred HHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcEEEEec
Q 030035 81 LIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVDVLADY 160 (184)
Q Consensus 81 ~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~vLa~~ 160 (184)
+|+|+.++++. ..+++|++++++.++.+|++..++.....+++++ ..|+..+.|.+.|.++|++.+++|+.
T Consensus 104 ~QlL~~~~gg~---~~~~lg~~~~~~~~~~~g~~~~~~~~~~~~~g~g------~~~~~~~~h~~~v~~l~~~~~v~a~s 174 (219)
T 1q7r_A 104 LILLAKRIVGY---DEPHLGLMDITVERNSFGRQRESFEAELSIKGVG------DGFVGVFIRAPHIVEAGDGVDVLATY 174 (219)
T ss_dssp HHHHEEEEESS---CCCCCCCEEEEEECHHHHCCCCCEEEEEEETTTE------EEEEEEESSCCEEEEECTTCEEEEEE
T ss_pred HHHHHHHhCCC---CcCCcCccceEEEecCCCccccceecCcccCCCC------CceEEEEEecceeeccCCCcEEEEEc
Confidence 99999998752 3578999999999888888766664433445543 46899999999999999999999997
No 7
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.89 E-value=6.9e-23 Score=162.88 Aligned_cols=146 Identities=21% Similarity=0.270 Sum_probs=115.0
Q ss_pred CEEEEEecC-CCHHHHHHHHHHCC-----CeEEEEcCCCCCCCCCEEEEcCC-c-hhHHHHHHhcCChHHHHHHHHHcCC
Q 030035 1 MVVGVLALQ-GSFNEHIAALKRLG-----VKGVEIRKPDQLQNVSSLIIPGG-E-STTMARLAEYHNLFPALREFVKMGK 72 (184)
Q Consensus 1 m~IgVl~~q-G~~~~~~~~L~~~G-----~~v~~v~~~~~l~~~DglIipGG-~-~~~~~~l~~~~~l~~~l~~~~~~g~ 72 (184)
|||+||.++ ||+.++.++|+++| +++++++.+++ .++|+|||||| . .+.+.++.+ .++.++|++++++++
T Consensus 1 m~I~iid~~~g~~~s~~~~l~~~G~~~~~~~~~~~~~~~~-~~~dglilpG~g~~~~~~~~l~~-~~~~~~i~~~~~~~~ 78 (201)
T 1gpw_B 1 MRIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPRN-DLYDLLFIPGVGHFGEGMRRLRE-NDLIDFVRKHVEDER 78 (201)
T ss_dssp CEEEEECCSSSCCHHHHHHHHHHSTTBSSCEEEEECSCCS-SCCSEEEECCCSCSHHHHHHHHH-TTCHHHHHHHHHTTC
T ss_pred CEEEEEecCCchHHHHHHHHHHcCCCCCceEEEEECCCcc-cCCCEEEECCCCcHHHHHHHHHh-hCHHHHHHHHHHcCC
Confidence 899999987 79999999999999 99999988777 89999999995 3 344556654 357899999999999
Q ss_pred cEEEEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCC---CCC-cceeEeeecCceEE
Q 030035 73 PVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQE---GGP-ETFRGVFIRAPAVL 148 (184)
Q Consensus 73 PvlGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~---~~~-~~~~a~firap~i~ 148 (184)
|+||||+|||+|++++.+. +...++++++.++.++..+ .+|+++|+. ..+ +++.+.|.|++.|.
T Consensus 79 PilGIC~G~Qll~~~~g~~--G~~~~l~~~~g~v~~~~~~----------~~~~~g~~~l~~~~~~~~~~v~~~H~~~v~ 146 (201)
T 1gpw_B 79 YVVGVCLGMQLLFEESEEA--PGVKGLSLIEGNVVKLRSR----------RLPHMGWNEVIFKDTFPNGYYYFVHTYRAV 146 (201)
T ss_dssp EEEEETHHHHTTSSEETTE--EEEECCCSSSEEEEECCCS----------SCSEEEEEEEEESSSSCCEEEEEEESEEEE
T ss_pred eEEEEChhHHHHHHhhccC--CCCCCcceeeeEEEEcCCC----------CCCcccceeeEeccCCCCCeEEEECcceec
Confidence 9999999999999998632 2367899999998887432 123333331 112 36889999999998
Q ss_pred ecCCCcEEEEecCC
Q 030035 149 DVGPDVDVLADYPV 162 (184)
Q Consensus 149 ~~~~~v~vLa~~~~ 162 (184)
.+ +.+++|+.++
T Consensus 147 ~~--~~~vla~s~~ 158 (201)
T 1gpw_B 147 CE--EEHVLGTTEY 158 (201)
T ss_dssp EC--GGGEEEEEEE
T ss_pred cC--CCEEEEEEcc
Confidence 77 6899998653
No 8
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.86 E-value=2.2e-22 Score=160.95 Aligned_cols=154 Identities=18% Similarity=0.181 Sum_probs=108.6
Q ss_pred EEEEEec-CCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCC-chhH-HHHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 2 VVGVLAL-QGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGG-ESTT-MARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 2 ~IgVl~~-qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG-~~~~-~~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
||+|+.+ .||+.++.++|+++|++++++++++++.++|+|||||+ .+.. +..+.. .+ .++.+.+.++|+||||
T Consensus 4 ~I~iiD~g~~n~~si~~al~~~G~~~~v~~~~~~l~~~D~lilPG~g~~~~~~~~~~~-~~---~i~~~~~~~~PvlGIC 79 (211)
T 4gud_A 4 NVVIIDTGCANISSVKFAIERLGYAVTISRDPQVVLAADKLFLPGVGTASEAMKNLTE-RD---LIELVKRVEKPLLGIC 79 (211)
T ss_dssp CEEEECCCCTTHHHHHHHHHHTTCCEEEECCHHHHHHCSEEEECCCSCHHHHHHHHHH-TT---CHHHHHHCCSCEEEET
T ss_pred EEEEEECCCChHHHHHHHHHHCCCEEEEECCHHHHhCCCEEEECCCCCHHHHHHHHHh-cC---hHHHHHHcCCCEEEEc
Confidence 6999987 46889999999999999999999888999999999994 4333 333333 23 3555567899999999
Q ss_pred hHHHHHHHhhhcccC---CCccccCcceeeeeecccCceeEEeeccccCCccc---cCCCCCcceeEeeecCceEEecCC
Q 030035 79 AGLIFLANKAVGQKL---GGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALA---SQEGGPETFRGVFIRAPAVLDVGP 152 (184)
Q Consensus 79 ~G~QlLa~~~~~~~~---~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~---~~~~~~~~~~a~firap~i~~~~~ 152 (184)
+|||||++++.+... ....++|+++++|.|+.++++..++.....+.... .-.+.+..++.+|.|..++ ++
T Consensus 80 lG~QlL~~~~g~~~~~~~~~~~gl~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~H~~~v---~~ 156 (211)
T 4gud_A 80 LGMQLLGKLSEEKGQKADEIVQCLGLVDGEVRLLQTGDLPLPHMGWNTVQVKEGHPLFNGIEPDAYFYFVHSFAM---PV 156 (211)
T ss_dssp HHHHTTSSEECCC----CCCEECCCSSSCEEEECCCTTSCSSEEEEECCEECTTCGGGTTCCTTCCEEEEESEEC---CC
T ss_pred hhHhHHHHHhCCcccccCCccccceeccceEEEcccCCcceeeccceeeeeeccChhhcCCCCCcEEEEEeeEEe---CC
Confidence 999999998765321 24678999999999998876543332211100000 0024456778889998764 45
Q ss_pred CcEEEEecCC
Q 030035 153 DVDVLADYPV 162 (184)
Q Consensus 153 ~v~vLa~~~~ 162 (184)
+.+++|+.++
T Consensus 157 ~~~~~a~~~~ 166 (211)
T 4gud_A 157 GDYTIAQCEY 166 (211)
T ss_dssp CTTEEEEEES
T ss_pred CCeEEEEecC
Confidence 6677777654
No 9
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.84 E-value=1.8e-20 Score=149.08 Aligned_cols=151 Identities=19% Similarity=0.215 Sum_probs=108.3
Q ss_pred CEEEEEecC-CCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcC-Cch-hHHHHHHhcCChHHHHHHHHHcCCcEEEE
Q 030035 1 MVVGVLALQ-GSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPG-GES-TTMARLAEYHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 1 m~IgVl~~q-G~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipG-G~~-~~~~~l~~~~~l~~~l~~~~~~g~PvlGI 77 (184)
|||+|+.++ ||+.++.++|+++|+++++++++++++++|+||||| |.. +.+.++.+ ..+.+.|+++++.++|+|||
T Consensus 3 ~~I~iid~~~~~~~~~~~~l~~~G~~~~~~~~~~~l~~~d~lil~G~g~~~~~~~~l~~-~~~~~~i~~~~~~~~PilGI 81 (200)
T 1ka9_H 3 MKALLIDYGSGNLRSAAKALEAAGFSVAVAQDPKAHEEADLLVLPGQGHFGQVMRAFQE-SGFVERVRRHLERGLPFLGI 81 (200)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHTTCEEEEESSTTSCSSCSEEEECCCSCHHHHHHTTSS-SCTHHHHHHHHHTTCCEEEC
T ss_pred cEEEEEeCCCccHHHHHHHHHHCCCeEEEecChHHcccCCEEEECCCCcHHHHHHHHHh-cCHHHHHHHHHHcCCeEEEE
Confidence 589999875 699999999999999999998877888999999999 543 33333332 35788999999999999999
Q ss_pred chHHHHHHHhhhcccCCCccccCcceeeeeecc--cCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcE
Q 030035 78 CAGLIFLANKAVGQKLGGQELVGGLDCTVHRNF--FGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVD 155 (184)
Q Consensus 78 C~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~--~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~ 155 (184)
|+|+|+|++++.+. +...+||+++.++.|+. ..++....+..+.-. +. +.++ +.++|.|++.+ .+++. +
T Consensus 82 C~G~Qll~~~~~~~--Gg~~~l~~~~g~v~~~~~~~~~~~G~~~v~~~~~-l~---~~~~-~~~~~~Hs~~~-~~~~~-~ 152 (200)
T 1ka9_H 82 CVGMQVLYEGSEEA--PGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGGA-FA---PLTG-RHFYFANSYYG-PLTPY-S 152 (200)
T ss_dssp THHHHTTSSEETTS--TTCCCCCSSSSEEEECCSSSSSEEEEEECEECGG-GG---GGTT-CEEEEEESEEC-CCCTT-C
T ss_pred cHHHHHHHHhcccc--CCcCCccccccEEEECCCCCCCceeEEEEEechh-hh---cCCC-CCEEEeccccc-CCCCC-c
Confidence 99999999997531 23788999999998875 111222111111101 21 2233 78899999999 66543 4
Q ss_pred EEEecCC
Q 030035 156 VLADYPV 162 (184)
Q Consensus 156 vLa~~~~ 162 (184)
+ |+.++
T Consensus 153 v-a~s~~ 158 (200)
T 1ka9_H 153 L-GKGEY 158 (200)
T ss_dssp C-EEEEE
T ss_pred E-EEEEe
Confidence 5 65543
No 10
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.79 E-value=2.9e-19 Score=162.34 Aligned_cols=150 Identities=24% Similarity=0.323 Sum_probs=112.0
Q ss_pred CEEEEEecC-CCHHHHHHHHHHCCCeEEEEcCCCC--CCCCCEEEEcC-CchhH-HHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 1 MVVGVLALQ-GSFNEHIAALKRLGVKGVEIRKPDQ--LQNVSSLIIPG-GESTT-MARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 1 m~IgVl~~q-G~~~~~~~~L~~~G~~v~~v~~~~~--l~~~DglIipG-G~~~~-~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
|+|+|+.++ |++.++.++|+++|+++++++.+++ ++++|+||||| |.... +..+.+ .++.+.|++++++++|+|
T Consensus 5 ~~I~Iid~~~g~~~~~~~~l~~~G~~~~vv~~~~~~~l~~~DglILpGgG~~~~~~~~l~~-~~~~~~i~~~~~~g~PiL 83 (555)
T 1jvn_A 5 PVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFN-RGFEKPIREYIESGKPIM 83 (555)
T ss_dssp CEEEEECCSCSCCHHHHHHHHHTTCEEEEESSGGGCCSTTCSCEEEEECSCHHHHHHHHHH-TTCHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHCCCEEEEECCccccccccCCEEEECCCCchHhHhhhhhh-ccHHHHHHHHHHcCCcEE
Confidence 489999985 8999999999999999999987766 88999999999 55433 344433 467899999999999999
Q ss_pred EEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCC---------CCCcceeEeeecCce
Q 030035 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQE---------GGPETFRGVFIRAPA 146 (184)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~---------~~~~~~~a~firap~ 146 (184)
|||+|||+|+.++.+ ++...+||+++.++.|.. .+ ...+|++||+. +.+..++++|.|+-.
T Consensus 84 GIC~G~QlL~~a~~e--gg~~~~Lg~lgg~v~~~~--~~------~~~~~~~G~~~v~~~~~L~~~l~~~~~~~~vHS~~ 153 (555)
T 1jvn_A 84 GIXVGLQALFAGSVE--SPKSTGLNYIDFKLSRFD--DS------EKPVPEIGWNSCIPSENLFFGLDPYKRYYFVHSFA 153 (555)
T ss_dssp EEEHHHHTTEEEETT--BTTCCCCCSEEEEEEECC--TT------TSCSSEEEEECCCCCTTCCTTCCTTSCEEEEESEE
T ss_pred EEchhhhhhhhhhhc--CCCccccCCCCcEEEECC--cC------CCCCccccceEEEEcCHHHhhCCCCceEEEEEEEE
Confidence 999999999998852 345789999999888742 11 22345555542 234445778876666
Q ss_pred EEec-------CCCcEEEEecC
Q 030035 147 VLDV-------GPDVDVLADYP 161 (184)
Q Consensus 147 i~~~-------~~~v~vLa~~~ 161 (184)
+..+ +++..++|+.+
T Consensus 154 ~~~i~~~~~~L~~g~~vlA~s~ 175 (555)
T 1jvn_A 154 AILNSEKKKNLENDGWKIAKAK 175 (555)
T ss_dssp CBCCHHHHHHHHHTTCEEEEEE
T ss_pred EEecccccccCCCCCEEEEEEc
Confidence 5442 46678888755
No 11
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.78 E-value=3.9e-18 Score=135.18 Aligned_cols=143 Identities=18% Similarity=0.200 Sum_probs=97.1
Q ss_pred CE-EEEEecCCCHHHH-HHHHHHCCCeEEEEcCCC----CCC--CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCC
Q 030035 1 MV-VGVLALQGSFNEH-IAALKRLGVKGVEIRKPD----QLQ--NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGK 72 (184)
Q Consensus 1 m~-IgVl~~qG~~~~~-~~~L~~~G~~v~~v~~~~----~l~--~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~ 72 (184)
|| |+|+...+.|... .++|+++|+++++++..+ +++ ++|+|||+||....... .+..-..+.|+++ +.++
T Consensus 1 m~mi~iid~~~s~~~~~~~~l~~~G~~~~v~~~~~~~~~~~~~~~~dglil~gG~~~~~~~-~~~~~~~~~i~~~-~~~~ 78 (195)
T 1qdl_B 1 MDLTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGPGTPEKR-EDIGVSLDVIKYL-GKRT 78 (195)
T ss_dssp CCEEEEEECSCSSHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCSSCTTSH-HHHTTHHHHHHHH-TTTS
T ss_pred CCEEEEEECCCchHHHHHHHHHhCCCEEEEEeCCCCCHHHHhhCCCCEEEECCCCCChhhh-hhhhHHHHHHHHh-cCCC
Confidence 77 9999998887764 589999999999987653 343 59999998875332211 1111234777774 7799
Q ss_pred cEEEEchHHHHHHHhhhcccCCCccccCcceeeeeec---ccCcee-EEeeccccCCccccCCCCCcceeEeeecCceEE
Q 030035 73 PVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRN---FFGSQI-QSFEAELSVPALASQEGGPETFRGVFIRAPAVL 148 (184)
Q Consensus 73 PvlGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn---~~Grqv-~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~ 148 (184)
|+||||+|||+|+.++.. ++.++ .+|+.. .++...-.-+-+ .+.++++.+.+.|++.|.
T Consensus 79 PvLGIC~G~QlL~~~~gg--------------~v~~~~~~~~g~~~~v~~~~~~~~~l~---~~~~~~~~v~~~H~~~v~ 141 (195)
T 1qdl_B 79 PILGVCLGHQAIGYAFGA--------------KIRRARKVFHGKISNIILVNNSPLSLY---YGIAKEFKATRYHSLVVD 141 (195)
T ss_dssp CEEEETHHHHHHHHHTTC--------------EEEEEEEEEEEEEEEEEECCSSCCSTT---TTCCSEEEEEEEEEEEEE
T ss_pred cEEEEehHHHHHHHHhCC--------------EEeccCCCcCCCceEEEECCCCHhHHH---hcCCCceEEeccccchhh
Confidence 999999999999999753 22222 233221 122111000111 234567999999999999
Q ss_pred ecCCCcEEEEec-CC
Q 030035 149 DVGPDVDVLADY-PV 162 (184)
Q Consensus 149 ~~~~~v~vLa~~-~~ 162 (184)
++|++++++|+. ++
T Consensus 142 ~l~~~~~vla~s~~~ 156 (195)
T 1qdl_B 142 EVHRPLIVDAISAED 156 (195)
T ss_dssp CCCTTEEEEEEESSS
T ss_pred hCCCCcEEEEEECCC
Confidence 999999999998 54
No 12
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.74 E-value=8.1e-18 Score=135.34 Aligned_cols=142 Identities=17% Similarity=0.220 Sum_probs=98.0
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcC---CCCCCCCCEEEEcCC-chhHHHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK---PDQLQNVSSLIIPGG-ESTTMARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~---~~~l~~~DglIipGG-~~~~~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
|||.++...++|.. +.++|+++|+++++++. ++++.++|+|||||| +++.++.+. .....+...+.++|+|
T Consensus 14 ~~i~~id~~~~~~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~p~~~~~~~~----~~~l~~~~~~~~~PiL 89 (212)
T 2a9v_A 14 LKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGAPNIDEELDK----LGSVGKYIDDHNYPIL 89 (212)
T ss_dssp CBEEEEEESCCTTCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEECSCGGGTGGG----HHHHHHHHHHCCSCEE
T ss_pred ceEEEEeCCCccHHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCCCCCCccccc----chhHHHHHHhCCCCEE
Confidence 58999988777654 66899999999888864 456778999999999 665543211 1111233346799999
Q ss_pred EEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcE
Q 030035 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVD 155 (184)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~ 155 (184)
|||+|||+|+.+++.. .. +..++.+|.+..++...- +-+ .+.++++.+.+.|.+.|.++|++++
T Consensus 90 GIC~G~Qll~~~lGg~----v~-------~~~~~~~G~~~v~~~~~~--~l~---~~~~~~~~v~~~H~~~v~~l~~~~~ 153 (212)
T 2a9v_A 90 GICVGAQFIALHFGAS----VV-------KAKHPEFGKTKVSVMHSE--NIF---GGLPSEITVWENHNDEIINLPDDFT 153 (212)
T ss_dssp EETHHHHHHHHHTTCE----EE-------EEEEEEEEEEEEEESCCC--GGG---TTCCSEEEEEEEEEEEEESCCTTEE
T ss_pred EEChHHHHHHHHhCCE----EE-------cCCCcccCceeeEECCCC--hhH---hcCCCceEEEeEhhhhHhhCCCCcE
Confidence 9999999999997431 10 112234565444443210 111 1334578899999999999999999
Q ss_pred EEEecCC
Q 030035 156 VLADYPV 162 (184)
Q Consensus 156 vLa~~~~ 162 (184)
++|+.++
T Consensus 154 vlA~s~d 160 (212)
T 2a9v_A 154 LAASSAT 160 (212)
T ss_dssp EEEECSS
T ss_pred EEEEeCC
Confidence 9999875
No 13
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=99.73 E-value=8.1e-19 Score=143.07 Aligned_cols=149 Identities=14% Similarity=0.160 Sum_probs=104.9
Q ss_pred EEEEEecC-------CCHHHHHHHHHHCCCeEEEEcCC----CCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHc
Q 030035 2 VVGVLALQ-------GSFNEHIAALKRLGVKGVEIRKP----DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKM 70 (184)
Q Consensus 2 ~IgVl~~q-------G~~~~~~~~L~~~G~~v~~v~~~----~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~ 70 (184)
||+|+... |+..++.++|+++|++++.++.. ++|.++|+|++|||....+-++.+..++.+.|++++++
T Consensus 33 ~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~ 112 (229)
T 1fy2_A 33 SAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKR 112 (229)
T ss_dssp EEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHc
Confidence 78888765 56777889999999999888633 45778999999999877765555557899999999999
Q ss_pred CCcEEEEchHHHHHHHhhhccc------CCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecC
Q 030035 71 GKPVWGTCAGLIFLANKAVGQK------LGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRA 144 (184)
Q Consensus 71 g~PvlGIC~G~QlLa~~~~~~~------~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~fira 144 (184)
|+|++|||+|||+|++.+.... .+..++||+++..+. ||+.. .+.+.++.|+|+
T Consensus 113 G~p~~G~sAG~~~l~~~~~~~~d~~~~~~~~~~gLgli~~~v~-----------------~H~~~---~~~~~h~~~~R~ 172 (229)
T 1fy2_A 113 GALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALDLFPLQIN-----------------PHFTN---ALPEGHKGETRE 172 (229)
T ss_dssp TCEEEEETHHHHHTSSBSTTCCSCCCSCCSCSBCCCCSSSEEE-----------------CSCCC------------CHH
T ss_pred CCEEEEECHHHHhhcccceecCCCCcccCCcCCcCCCCCceec-----------------CCcCC---CCCccccchhHH
Confidence 9999999999999999875420 012455666654433 34320 011225678999
Q ss_pred ceEEecC---CCcEEEEecCCCCcccccC
Q 030035 145 PAVLDVG---PDVDVLADYPVPSNKVLYS 170 (184)
Q Consensus 145 p~i~~~~---~~v~vLa~~~~~~~~~~~~ 170 (184)
|.+.+.. ++++++|..++.......+
T Consensus 173 ~~i~~~~~~~~~~~~lai~e~~av~v~~~ 201 (229)
T 1fy2_A 173 QRIRELLVVAPELTVIGLPEGNWIQVSNG 201 (229)
T ss_dssp HHHHHHHHHSTTCEEEECCTTCEEEECSS
T ss_pred HHHHHHHhhCCCCeEEEEECCEEEEEECC
Confidence 9988764 3799999988876655433
No 14
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.72 E-value=4.3e-17 Score=132.93 Aligned_cols=148 Identities=14% Similarity=0.091 Sum_probs=98.3
Q ss_pred CEEEEEecCC--CHHHHHHHHHHCCCeEEEEcC------CCCCCCCCEEEEcCCchhH---HHHHHhcC--ChHHHHHHH
Q 030035 1 MVVGVLALQG--SFNEHIAALKRLGVKGVEIRK------PDQLQNVSSLIIPGGESTT---MARLAEYH--NLFPALREF 67 (184)
Q Consensus 1 m~IgVl~~qG--~~~~~~~~L~~~G~~v~~v~~------~~~l~~~DglIipGG~~~~---~~~l~~~~--~l~~~l~~~ 67 (184)
|||.||.-.. ++..+.+.+++.|+++.+++. ++++.++|+|||+||+.+. .....+.. ...+.|+++
T Consensus 1 m~i~vi~h~~~e~~g~~~~~l~~~g~~~~~~~~~~~~~~p~~~~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~ 80 (236)
T 3l7n_A 1 MRIHFILHETFEAPGAYLAWAALRGHDVSMTKVYRYEKLPKDIDDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKA 80 (236)
T ss_dssp CEEEEEECCTTSCCHHHHHHHHHTTCEEEEEEGGGTCCCCSCGGGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCCchHHHHHHHHCCCeEEEEeeeCCCCCCCCccccCEEEECCCCCCcccccccCcccchHHHHHHHHHH
Confidence 8888876432 456677889999999988852 3456789999999997552 12222211 146789999
Q ss_pred HHcCCcEEEEchHHHHHHHhhhcccCC-CccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCce
Q 030035 68 VKMGKPVWGTCAGLIFLANKAVGQKLG-GQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPA 146 (184)
Q Consensus 68 ~~~g~PvlGIC~G~QlLa~~~~~~~~~-~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~ 146 (184)
++.++||||||+|||+|+.+++..... ..+.+|+.++++..+.. .-|-+ .+.+..+.+.+.|...
T Consensus 81 ~~~~~PvLGIClG~QlL~~~~Gg~v~~~~~~~~G~~~v~~~~~~~-----------~~~l~---~~~~~~~~v~~~H~~~ 146 (236)
T 3l7n_A 81 AKSEKIIVGVCLGAQLMGVAYGADYLHSPKKEIGNYLISLTEAGK-----------MDSYL---SDFSDDLLVGHWHGDM 146 (236)
T ss_dssp HHTTCEEEEETHHHHHHHHHTTCCCEEEEEEEEEEEEEEECTTGG-----------GCGGG---TTSCSEEEEEEEEEEE
T ss_pred HHcCCCEEEEchHHHHHHHHhCCEEecCCCceeeeEEEEEccCcc-----------cChHH---hcCCCCcEEEEecCCc
Confidence 999999999999999999998542110 12334444433322100 00111 1344578999999975
Q ss_pred EEecCCCcEEEEecCCC
Q 030035 147 VLDVGPDVDVLADYPVP 163 (184)
Q Consensus 147 i~~~~~~v~vLa~~~~~ 163 (184)
.++|++.++||+.++-
T Consensus 147 -~~lp~~~~vla~s~~~ 162 (236)
T 3l7n_A 147 -PGLPDKAQVLAISQGC 162 (236)
T ss_dssp -CCCCTTCEEEEECSSC
T ss_pred -ccCCChheEEEECCCC
Confidence 7789999999998653
No 15
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.72 E-value=3.2e-17 Score=134.13 Aligned_cols=132 Identities=17% Similarity=0.143 Sum_probs=94.6
Q ss_pred CCHHHHHHHHHHCCCeEEEEcC------CCCCCCCCEEEEcCCchhHH-----HHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 10 GSFNEHIAALKRLGVKGVEIRK------PDQLQNVSSLIIPGGESTTM-----ARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 10 G~~~~~~~~L~~~G~~v~~v~~------~~~l~~~DglIipGG~~~~~-----~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
+|...+.+.|++.|+++.+++. ++++.++|+||||||....+ ..+. ...+.|+++++.++|+||||
T Consensus 24 ~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~---~~~~~i~~~~~~~~PiLGIC 100 (239)
T 1o1y_A 24 EDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLK---YEFQLIEEILKKEIPFLGIC 100 (239)
T ss_dssp SSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHH---HHHHHHHHHHHHTCCEEEET
T ss_pred CCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHH---HHHHHHHHHHHCCCCEEEEc
Confidence 3667788899999999886642 23456899999999864332 2222 25778999988899999999
Q ss_pred hHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeecccc--CCccccCCCCCcceeEeeecCceEEecCCCcEE
Q 030035 79 AGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELS--VPALASQEGGPETFRGVFIRAPAVLDVGPDVDV 156 (184)
Q Consensus 79 ~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~--~~~~~~~~~~~~~~~a~firap~i~~~~~~v~v 156 (184)
+|||+|+.+++ .++.++..|.+...++.... -+-+ .+.++++.+.+.|...+ ++|++.++
T Consensus 101 ~G~QlL~~alG--------------G~v~~~~~g~~~G~~~v~~~~~~~l~---~~~~~~~~~~~~H~~~v-~lp~~~~v 162 (239)
T 1o1y_A 101 LGSQMLAKVLG--------------ASVYRGKNGEEIGWYFVEKVSDNKFF---REFPDRLRVFQWHGDTF-DLPRRATR 162 (239)
T ss_dssp HHHHHHHHHTT--------------CCEEECTTCCEEEEEEEEECCCCGGG---TTSCSEEEEEEEESEEE-CCCTTCEE
T ss_pred hhHHHHHHHcC--------------CeEecCCCCCccccEEEEECCCCchH---HhCCCCceeEeecCCcc-ccCCCCEE
Confidence 99999999974 34555555555555433211 0111 23445789999999988 88999999
Q ss_pred EEecCC
Q 030035 157 LADYPV 162 (184)
Q Consensus 157 La~~~~ 162 (184)
+|+.++
T Consensus 163 lA~s~~ 168 (239)
T 1o1y_A 163 VFTSEK 168 (239)
T ss_dssp EEECSS
T ss_pred EEEcCC
Confidence 999865
No 16
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.72 E-value=4.6e-17 Score=128.07 Aligned_cols=138 Identities=20% Similarity=0.318 Sum_probs=96.2
Q ss_pred CEEEEEecCCCH-HHHHHHHHHCCCeEEEEcCCC---CCC--CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcE
Q 030035 1 MVVGVLALQGSF-NEHIAALKRLGVKGVEIRKPD---QLQ--NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 1 m~IgVl~~qG~~-~~~~~~L~~~G~~v~~v~~~~---~l~--~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pv 74 (184)
|.|+|+.+.+.+ ..+.++|+++|+++++++..+ ++. ++|+||||||. .. .. .....+.|+++.+.++|+
T Consensus 1 mmi~iid~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~dglil~Gg~-~~-~~---~~~~~~~i~~~~~~~~Pi 75 (189)
T 1wl8_A 1 MMIVIMDNGGQYVHRIWRTLRYLGVETKIIPNTTPLEEIKAMNPKGIIFSGGP-SL-EN---TGNCEKVLEHYDEFNVPI 75 (189)
T ss_dssp CEEEEEECSCTTHHHHHHHHHHTTCEEEEEETTCCHHHHHHTCCSEEEECCCS-CT-TC---CTTHHHHHHTGGGTCSCE
T ss_pred CeEEEEECCCchHHHHHHHHHHCCCeEEEEECCCChHHhcccCCCEEEECCCC-Ch-hh---hhhHHHHHHHHhhCCCeE
Confidence 679999988765 456799999999999987554 333 59999999996 22 11 122467788776789999
Q ss_pred EEEchHHHHHHHhhhcccCCCccccCcceeeeee---cccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecC
Q 030035 75 WGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHR---NFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVG 151 (184)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~r---n~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~ 151 (184)
||||+|+|+|+.++... +.+ ..+|..-..+... -+-+ .+.++++++...|.+.+.++|
T Consensus 76 lGIC~G~Q~l~~~~gg~--------------v~~~~~~~~G~~~~~~~~~--~~l~---~~~~~~~~~~~~h~~~v~~l~ 136 (189)
T 1wl8_A 76 LGICLGHQLIAKFFGGK--------------VGRGEKAEYSLVEIEIIDE--XEIF---KGLPKRLKVWESHMDEVKELP 136 (189)
T ss_dssp EEETHHHHHHHHHHTCE--------------EEECSCCSCEEEEEEESCC----CC---TTSCSEEEEEECCSEEEEECC
T ss_pred EEEcHHHHHHHHHhCCc--------------eecCCCcccCceeEEEecC--chHH---hCCCCceEEEEEeeeehhhCC
Confidence 99999999999998532 111 1233221112110 0111 123456888899999999999
Q ss_pred CCcEEEEecCC
Q 030035 152 PDVDVLADYPV 162 (184)
Q Consensus 152 ~~v~vLa~~~~ 162 (184)
++.+++|+.++
T Consensus 137 ~~~~vla~s~~ 147 (189)
T 1wl8_A 137 PKFKILARSET 147 (189)
T ss_dssp TTEEEEEEESS
T ss_pred CCcEEEEEcCC
Confidence 99999999875
No 17
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.71 E-value=2.3e-16 Score=125.56 Aligned_cols=100 Identities=24% Similarity=0.299 Sum_probs=79.0
Q ss_pred CEEEEEecCCCH--HHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHH----HHHhcCChHHHHHHHHHcCCcE
Q 030035 1 MVVGVLALQGSF--NEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMA----RLAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 1 m~IgVl~~qG~~--~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~----~l~~~~~l~~~l~~~~~~g~Pv 74 (184)
|||+||.+.+.. .++.++|+++|+++++++..+++.++|+||||||.+.... .+.+...+.++|+++.+.++||
T Consensus 3 ~~i~il~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pi 82 (213)
T 3d54_D 3 PRACVVVYPGSNCDRDAYHALEINGFEPSYVGLDDKLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLI 82 (213)
T ss_dssp CEEEEECCTTEEEHHHHHHHHHTTTCEEEEECTTCCCSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEE
T ss_pred cEEEEEEcCCCCccHHHHHHHHHCCCEEEEEecCCCcccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEE
Confidence 489999998864 5788999999999999987667889999999998643211 1333346789999999899999
Q ss_pred EEEchHHHHHHHhhhcccCCCccccCcceeeeeecccC
Q 030035 75 WGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFG 112 (184)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~G 112 (184)
+|||+|+|+|+.+ |+++.++.+|..+
T Consensus 83 lgIC~G~qlLa~a------------Gll~g~v~~~~~~ 108 (213)
T 3d54_D 83 MGICNGFQILIEM------------GLLKGALLQNSSG 108 (213)
T ss_dssp EECHHHHHHHHHH------------TSSCSEEECCSSS
T ss_pred EEECHHHHHHHHc------------CCCCCCeecCCCC
Confidence 9999999999997 4555677776543
No 18
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.71 E-value=2.6e-16 Score=124.29 Aligned_cols=140 Identities=16% Similarity=0.135 Sum_probs=91.2
Q ss_pred CEEEEEecCCCHHHH-HHHHHHCCCeEEEEcCCCC---CC------CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHc
Q 030035 1 MVVGVLALQGSFNEH-IAALKRLGVKGVEIRKPDQ---LQ------NVSSLIIPGGESTTMARLAEYHNLFPALREFVKM 70 (184)
Q Consensus 1 m~IgVl~~qG~~~~~-~~~L~~~G~~v~~v~~~~~---l~------~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~ 70 (184)
+||+|+...+.|... .++|+++|+++++++...+ +. +.|++||+||.++..+ .++...+.++++.
T Consensus 1 ~~i~iiDn~~s~~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~~~~-----~~~~~~l~~~~~~ 75 (192)
T 1i1q_B 1 ADILLLDNIDSFTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGVPSE-----AGCMPELLTRLRG 75 (192)
T ss_dssp CEEEEEECSCSSHHHHHHHHHHTTCEEEEEETTSCSHHHHHHHTTCSSEEEEECCCSSCGGG-----STTHHHHHHHHBT
T ss_pred CcEEEEECCccHHHHHHHHHHHCCCeEEEEECCCCHHHHHHHhhhccCCeEEECCCCcCchh-----CchHHHHHHHHhc
Confidence 589999999988664 6999999999999976532 21 3446888887655432 2334444455678
Q ss_pred CCcEEEEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEec
Q 030035 71 GKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDV 150 (184)
Q Consensus 71 g~PvlGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~ 150 (184)
++|+||||+|||+|+.+++.... .+. +..+|+........ -+-+ .+.++++.+.|.|+++|.++
T Consensus 76 ~~PilGIC~G~Qll~~~~Gg~v~----~~~-------~~~~g~~~~~~~~~--~~l~---~~~~~~~~v~~~H~~~v~~l 139 (192)
T 1i1q_B 76 KLPIIGICLGHQAIVEAYGGYVG----QAG-------EILHGKATSIEHDG--QAMF---AGLANPLPVARYHSLVGSNV 139 (192)
T ss_dssp TBCEEEETHHHHHHHHHTSCCCC----C----------CCSSEEEEEEECC--CGGG---TTSCSSEEEEECCC---CCC
T ss_pred CCCEEEECcChHHHHHHhCCEEE----eCC-------CcEecceeEEecCC--ChHH---hcCCCCcEEEechhhHhhhC
Confidence 99999999999999999853211 010 12345333222111 0111 13346799999999999999
Q ss_pred CCCcEEEEecC
Q 030035 151 GPDVDVLADYP 161 (184)
Q Consensus 151 ~~~v~vLa~~~ 161 (184)
|++.+++|+++
T Consensus 140 p~~~~v~a~~~ 150 (192)
T 1i1q_B 140 PAGLTINAHFN 150 (192)
T ss_dssp CTTCEEEEEET
T ss_pred CCccEEEECCC
Confidence 99999999765
No 19
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.71 E-value=6.3e-17 Score=147.00 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=102.0
Q ss_pred CEEEEEecCCCHH-HHHHHHHHCCCeEEEEcC---CCCCC--CCCEEEEcCCchhHHHHHHhcCChHH-HHHHHHHcCCc
Q 030035 1 MVVGVLALQGSFN-EHIAALKRLGVKGVEIRK---PDQLQ--NVSSLIIPGGESTTMARLAEYHNLFP-ALREFVKMGKP 73 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~G~~v~~v~~---~~~l~--~~DglIipGG~~~~~~~l~~~~~l~~-~l~~~~~~g~P 73 (184)
.||.||.+..+|. .+.++|+++|+.+.+++. .+++. ++|+||||||+++.++.- ...+.. .++.+.+.++|
T Consensus 8 ~~IlilD~Gs~~~~~I~r~lre~Gv~~eiv~~~~~~~~i~~~~~dgIIlsGGp~s~~~~~--~~~~~~~l~~~a~~~g~P 85 (556)
T 3uow_A 8 DKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAG--SPHLKKEVFEYFLEKKIP 85 (556)
T ss_dssp CEEEEEESSCTTHHHHHHHHHHTTCCEEEEETTCCGGGTTTSCEEEEEECCCSCCTTSTT--CCCCCHHHHHHHHHTTCC
T ss_pred CEEEEEECCCccHHHHHHHHHHCCCeEEEEECCCCHHHHhhcCCCEEEECCCCCcccccC--CcchhHHHHHHhhhcCCC
Confidence 3799999977665 577999999999988863 34454 689999999986654321 112333 34445667999
Q ss_pred EEEEchHHHHHHHhhhcccCC-CccccCcceeeeeecc---cCceeEEeeccccCCcccc-----------C--CCC-Cc
Q 030035 74 VWGTCAGLIFLANKAVGQKLG-GQELVGGLDCTVHRNF---FGSQIQSFEAELSVPALAS-----------Q--EGG-PE 135 (184)
Q Consensus 74 vlGIC~G~QlLa~~~~~~~~~-~~~~LG~ldv~v~rn~---~Grqv~sf~~~~~~~~~~~-----------~--~~~-~~ 135 (184)
+||||+|||+|+++++..... .....|..++++..+. ....+..|+.. -++++| . .+. ++
T Consensus 86 vLGIC~G~QlLa~~lGG~V~~~~~~E~G~~~l~~~~~~~~~~~p~v~~~~~~--~~~mg~~~n~~~~~~~~~Lf~gl~~~ 163 (556)
T 3uow_A 86 IFGICYGMQEIAVQMNGEVKKSKTSEYGCTDVNILRNDNINNITYCRNFGDS--SSAMDLYSNYKLMNETCCLFENIKSD 163 (556)
T ss_dssp EEEETHHHHHHHHHTTCEEEEEEEEEEEEEEEEECCTTGGGGCSGGGGC-----CCHHHHHTTSCCCC--CGGGTTCCSS
T ss_pred EEEECHHHHHHHHHhCCcEecCCCcccCCcceeeccCcccccccceeccccc--ccccccccccccccccchhhcccccC
Confidence 999999999999987532110 1122333333332221 00111111111 145555 1 244 66
Q ss_pred ceeEeeecCceEEecCCCcEEEEecCC
Q 030035 136 TFRGVFIRAPAVLDVGPDVDVLADYPV 162 (184)
Q Consensus 136 ~~~a~firap~i~~~~~~v~vLa~~~~ 162 (184)
++.++|.|++.|..+|++++++|+.++
T Consensus 164 ~~~v~~~H~d~V~~lp~g~~vlA~s~~ 190 (556)
T 3uow_A 164 ITTVWMNHNDEVTKIPENFYLVSSSEN 190 (556)
T ss_dssp EEEEEEEEEEEEEECCTTCEEEEEETT
T ss_pred ceEEEEEccceeeccCCCcEEEEEeCC
Confidence 899999999999999999999999876
No 20
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.70 E-value=4.4e-17 Score=134.57 Aligned_cols=139 Identities=18% Similarity=0.177 Sum_probs=95.7
Q ss_pred CEEEEEec--CCCHHHHHHHHHHCCCeEEEEc------CCCCCCCCCEEEEcCCchhHH---HHHHhcCChHHHHHHHHH
Q 030035 1 MVVGVLAL--QGSFNEHIAALKRLGVKGVEIR------KPDQLQNVSSLIIPGGESTTM---ARLAEYHNLFPALREFVK 69 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~~G~~v~~v~------~~~~l~~~DglIipGG~~~~~---~~l~~~~~l~~~l~~~~~ 69 (184)
|||.||.- ..+...+.+.|++.|+++.+++ .+++++++|+||||||..+.. ..+. ...++|+++++
T Consensus 4 ~~vliiqh~~~e~~~~i~~~l~~~G~~v~v~~~~~~~~~p~~~~~~d~lIl~GGp~~~~d~~~~~~---~~~~~i~~~~~ 80 (250)
T 3m3p_A 4 KPVMIIQFSASEGPGHFGDFLAGEHIPFQVLRMDRSDPLPAEIRDCSGLAMMGGPMSANDDLPWMP---TLLALIRDAVA 80 (250)
T ss_dssp CCEEEEESSSSCCCHHHHHHHHHTTCCEEEEEGGGTCCCCSCGGGSSEEEECCCSSCTTSCCTTHH---HHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHCCCeEEEEeccCCCcCcCccccCCEEEECCCCCcccccchHHH---HHHHHHHHHHH
Confidence 35766642 2466778889999999998886 234567899999999975432 2232 25678898888
Q ss_pred cCCcEEEEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeecccc-----CCccccCCCCCcceeEeeecC
Q 030035 70 MGKPVWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELS-----VPALASQEGGPETFRGVFIRA 144 (184)
Q Consensus 70 ~g~PvlGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~-----~~~~~~~~~~~~~~~a~fira 144 (184)
.++|+||||+|+|+|+.+++. +|.++.. .+++.+...+. -|-+ +.|+.+.+.+.|.
T Consensus 81 ~~~PvlGIC~G~Qll~~~lGG--------------~V~~~~~-~e~G~~~v~~~~~~~~~~l~----g~~~~~~v~~~H~ 141 (250)
T 3m3p_A 81 QRVPVIGHCLGGQLLAKAMGG--------------EVTDSPH-AEIGWVRAWPQHVPQALEWL----GTWDELELFEWHY 141 (250)
T ss_dssp HTCCEEEETHHHHHHHHHTTC--------------CEEEEEE-EEEEEEEEEECSSHHHHHHH----SCSSCEEEEEEEE
T ss_pred cCCCEEEECHHHHHHHHHhCC--------------EEEeCCC-CceeeEEEEEecCCCCcccc----cCCCccEEEEEcc
Confidence 999999999999999999753 2333211 11111111111 0111 2345789999999
Q ss_pred ceEEecCCCcEEEEecCC
Q 030035 145 PAVLDVGPDVDVLADYPV 162 (184)
Q Consensus 145 p~i~~~~~~v~vLa~~~~ 162 (184)
..+ ++|++.++||+.++
T Consensus 142 ~~v-~lp~~~~vlA~s~~ 158 (250)
T 3m3p_A 142 QTF-SIPPGAVHILRSEH 158 (250)
T ss_dssp EEE-CCCTTEEEEEEETT
T ss_pred cee-ecCCCCEEEEEeCC
Confidence 998 89999999999876
No 21
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.68 E-value=1.1e-16 Score=144.45 Aligned_cols=142 Identities=18% Similarity=0.265 Sum_probs=94.2
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEEEc---CCCCCCC--CCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIR---KPDQLQN--VSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~---~~~~l~~--~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
||+||.+.+.|.. +.++|+++|+.+.++. +.+++.+ +|+||||||+++.++. +.....+++.+.|+|||
T Consensus 12 ~I~IlD~g~~~~~~i~r~lr~~Gv~~~i~p~~~~~~~i~~~~~dgIILsGGp~sv~~~-----~~~~~~~~~~~~~~PvL 86 (527)
T 3tqi_A 12 RILILDFGSQYAQLIARRVREIGVYCELMPCDIDEETIRDFNPHGIILSGGPETVTLS-----HTLRAPAFIFEIGCPVL 86 (527)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTCEEEEEETTCCSSSSTTTCCSEEEECCCCC--------------CCCSTTTSSSCEE
T ss_pred eEEEEECCCccHHHHHHHHHHCCCeEEEEECCCCHHHHHhcCCCEEEECCcCcccccC-----CChhhHHHHHhcCCCEE
Confidence 7999999887764 6699999999988874 3455654 4999999998765432 11222344456799999
Q ss_pred EEchHHHHHHHhhhcccCCCccccCcceeeeee---cccCceeEEeeccc-cCCccccC--CCCCcceeEeeecCceEEe
Q 030035 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHR---NFFGSQIQSFEAEL-SVPALASQ--EGGPETFRGVFIRAPAVLD 149 (184)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~r---n~~Grqv~sf~~~~-~~~~~~~~--~~~~~~~~a~firap~i~~ 149 (184)
|||+|||+|+.++++ +|.+ ..||++...+...- .+.++... ......+.++|.|.+.|.+
T Consensus 87 GIC~G~Qlla~~lGG--------------~V~~~~~~e~G~~~v~~~~~~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~~ 152 (527)
T 3tqi_A 87 GICYGMQTMAYQLGG--------------KVNRTAKAEFGHAQLRVLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVSE 152 (527)
T ss_dssp EETHHHHHHHHHSSS--------------CBC-----CEEEEEEEESSCTTTTSSCCSBCCTTSCCEEEEEEESSSCBCS
T ss_pred EEChHHHHHHHHcCC--------------eEEeCCCccccceEEEEcCCChhhcCCccccccccccceEEEEEcccchhc
Confidence 999999999999753 2222 25666555554321 12222100 0001168999999999999
Q ss_pred cCCCcEEEEecCC
Q 030035 150 VGPDVDVLADYPV 162 (184)
Q Consensus 150 ~~~~v~vLa~~~~ 162 (184)
+|++.+++|+.++
T Consensus 153 lp~g~~v~A~s~~ 165 (527)
T 3tqi_A 153 LPPGFEATACTDN 165 (527)
T ss_dssp CCTTCEEEEEETT
T ss_pred cCCCCEEEEEeCC
Confidence 9999999999865
No 22
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.68 E-value=9.4e-17 Score=129.84 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=87.9
Q ss_pred EEEEEecCCCHH-HHHHHHHHCCCeEEEEcCCC---CC--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 2 VVGVLALQGSFN-EHIAALKRLGVKGVEIRKPD---QL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 2 ~IgVl~~qG~~~-~~~~~L~~~G~~v~~v~~~~---~l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
||+||.+++.|. ++.++|+++|+++++++... ++ .++|+||||||.++.+.. ....+. +++.+.++|+|
T Consensus 26 ~I~iiD~g~~~~~~i~~~l~~~G~~~~vv~~~~~~~~l~~~~~dglil~Gg~~~~~~~--~~~~~~---~~~~~~~~Pil 100 (218)
T 2vpi_A 26 AVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAE--DAPWFD---PAIFTIGKPVL 100 (218)
T ss_dssp CEEEEECSTTTTHHHHHHHHHTTCCEEEECTTCCHHHHHHHTCSEEEEEC-----------CCCCC---GGGGTSSCCEE
T ss_pred eEEEEECCCchHHHHHHHHHHCCCEEEEEECCCChHHHhhcCCCEEEECCCCcccccc--cchhHH---HHHHHcCCCEE
Confidence 799999987665 46699999999999886432 23 359999999997655422 111222 23346799999
Q ss_pred EEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcE
Q 030035 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVD 155 (184)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~ 155 (184)
|||+|||+|+.++.. ++.|+.. ++...++..+. +.-.+-.+.++++.+.+.|.+.|.++|++.+
T Consensus 101 GIC~G~Qll~~~~GG--------------~v~~~~~-~~~G~~~v~~~-~~~~l~~~l~~~~~v~~~H~~~v~~l~~~~~ 164 (218)
T 2vpi_A 101 GICYGMQMMNKVFGG--------------TVHKKSV-REDGVFNISVD-NTCSLFRGLQKEEVVLLTHGDSVDKVADGFK 164 (218)
T ss_dssp EETHHHHHHHHHTTC--------------CEEEEEE-CSCEEEEEEEC-TTSGGGTTCCSEEEEEECSEEEESSCCTTCE
T ss_pred EEcHHHHHHHHHhCC--------------ceEeCCC-CcccEEEEEEc-cCChhHhcCCCCcEEeehhhhHhhhcCCCCE
Confidence 999999999998743 2333221 12222222111 0000002344578899999999999999999
Q ss_pred EEEecC
Q 030035 156 VLADYP 161 (184)
Q Consensus 156 vLa~~~ 161 (184)
++|+.+
T Consensus 165 vlA~s~ 170 (218)
T 2vpi_A 165 VVARSG 170 (218)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 999974
No 23
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.64 E-value=5.1e-16 Score=140.12 Aligned_cols=139 Identities=19% Similarity=0.248 Sum_probs=95.0
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcC---CCCCC--CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK---PDQLQ--NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~---~~~l~--~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pv 74 (184)
+||+||.+.+.|.. +.++|+++|+.+.+++. .+++. ++|+||||||+++.++... ..+. +++.+.|+||
T Consensus 8 ~~IlIlD~g~~~~~~i~r~lr~~G~~~~i~p~~~~~~~i~~~~~dgiILsGGp~s~~~~~~--~~~~---~~~~~~g~Pv 82 (525)
T 1gpm_A 8 HRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENS--PRAP---QYVFEAGVPV 82 (525)
T ss_dssp SEEEEEECSCTTHHHHHHHHHHTTCEEEEEESCCCHHHHHHHCCSEEEECCCSSCTTSTTC--CCCC---GGGGTSSSCE
T ss_pred CEEEEEECCCccHHHHHHHHHHCCCEEEEEECCCCHHHHhccCCCEEEECCcCccccccCC--cchH---HHHHHCCCCE
Confidence 47999999988876 55999999999888853 23344 4599999999876654321 1222 3344679999
Q ss_pred EEEchHHHHHHHhhhcccCCCccccCcceeeeee---cccCceeEEeeccccCCccccCCCCCc--------ceeEeeec
Q 030035 75 WGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHR---NFFGSQIQSFEAELSVPALASQEGGPE--------TFRGVFIR 143 (184)
Q Consensus 75 lGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~r---n~~Grqv~sf~~~~~~~~~~~~~~~~~--------~~~a~fir 143 (184)
||||+|||+|+.++++. |.+ ..||..--.+... + +-+ .+.+. .+.+++.|
T Consensus 83 LGIC~G~Qlla~~~GG~--------------V~~~~~~e~G~~~v~~~~~-~-~L~---~~l~~~~~~~~~~~~~v~~~H 143 (525)
T 1gpm_A 83 FGVCYGMQTMAMQLGGH--------------VEASNEREFGYAQVEVVND-S-ALV---RGIEDALTADGKPLLDVWMSH 143 (525)
T ss_dssp EEETHHHHHHHHHHTCE--------------EECCSSCEEEEEEEEECSC-C-TTT---TTCCSEECTTSCEEEEEEEEE
T ss_pred EEEChHHHHHHHHcCCE--------------EEeCCCcccceEEEEeCCC-C-Hhh---ccCccccccccccceEEEEEc
Confidence 99999999999998532 222 1334322222111 0 111 12233 68999999
Q ss_pred CceEEecCCCcEEEEecCCC
Q 030035 144 APAVLDVGPDVDVLADYPVP 163 (184)
Q Consensus 144 ap~i~~~~~~v~vLa~~~~~ 163 (184)
.+.|.++|++.+++|+.++-
T Consensus 144 ~~~V~~lp~g~~v~A~s~~~ 163 (525)
T 1gpm_A 144 GDKVTAIPSDFITVASTESC 163 (525)
T ss_dssp CSEEEECCTTCEEEEECSSC
T ss_pred cceeeeCCCCCEEEEECCCC
Confidence 99999999999999998763
No 24
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.63 E-value=5.6e-15 Score=121.72 Aligned_cols=141 Identities=15% Similarity=0.244 Sum_probs=92.8
Q ss_pred HHHHHHHHHCCCeEEEEcCCCC------CCCCCEEEEcCCch---hHHH-----------HHHhcCChHHHHHHHHHcCC
Q 030035 13 NEHIAALKRLGVKGVEIRKPDQ------LQNVSSLIIPGGES---TTMA-----------RLAEYHNLFPALREFVKMGK 72 (184)
Q Consensus 13 ~~~~~~L~~~G~~v~~v~~~~~------l~~~DglIipGG~~---~~~~-----------~l~~~~~l~~~l~~~~~~g~ 72 (184)
.+++++++++|+.++++....+ ++++|+||||||.+ ..+. ..++ ....+.|+++++.++
T Consensus 31 ~~~~~~l~~aG~~pv~lp~~~~~~~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd-~~~~~lir~a~~~~~ 109 (254)
T 3fij_A 31 QRYVDAIQKVGGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRD-SYEIALVRAALDAGK 109 (254)
T ss_dssp HHHHHHHHHHTCEEEEECCCCGGGHHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHH-HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchHHHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhh-HHHHHHHHHHHHcCC
Confidence 4578899999999998864332 46899999999943 2211 1111 014678899999999
Q ss_pred cEEEEchHHHHHHHhhhcccCCCccccCcceee-eee-----cccCceeEEeecc-ccCCccccCCCCCcceeEeeecCc
Q 030035 73 PVWGTCAGLIFLANKAVGQKLGGQELVGGLDCT-VHR-----NFFGSQIQSFEAE-LSVPALASQEGGPETFRGVFIRAP 145 (184)
Q Consensus 73 PvlGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~-v~r-----n~~Grqv~sf~~~-~~~~~~~~~~~~~~~~~a~firap 145 (184)
|+||||+|||+|+.+++.. ..+.++..... +.+ -.+|.+..++... ..+. ..++.+.+...|.+
T Consensus 110 PiLGIC~G~Qll~~a~Gg~---v~~~~~~~~~~~~~h~~~~~~~~g~~~v~~~~~s~l~~------~~~~~~~v~~~H~~ 180 (254)
T 3fij_A 110 PIFAICRGMQLVNVALGGT---LYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAK------HHPNKKLVNSLHHQ 180 (254)
T ss_dssp CEEEETHHHHHHHHHTTCC---EESSGGGSSSCCCCCBCCSCTTSCCEEEEECTTSSGGG------TCCTTEEECCBCSC
T ss_pred CEEEECHHHHHHHHHhCCc---eecccccccCccccccCCCCCccceEEEEeCCCChHHH------hcCCcEEEEEeccc
Confidence 9999999999999997532 22333332211 111 1245444444321 1111 22346788889999
Q ss_pred eEEecCCCcEEEEecCCC
Q 030035 146 AVLDVGPDVDVLADYPVP 163 (184)
Q Consensus 146 ~i~~~~~~v~vLa~~~~~ 163 (184)
.|.+++++.+++|+.++-
T Consensus 181 ~v~~l~~g~~v~a~s~dg 198 (254)
T 3fij_A 181 FIKKLAPSFKVTARTADG 198 (254)
T ss_dssp EESSCCSSEEEEEEETTC
T ss_pred hhhccCCCcEEEEEeCCC
Confidence 999999999999998753
No 25
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.60 E-value=9.6e-16 Score=137.63 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=93.2
Q ss_pred EEEEecCCCHH-HHHHHHHHCCCeEEEEcC---CCCCCC--CCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEE
Q 030035 3 VGVLALQGSFN-EHIAALKRLGVKGVEIRK---PDQLQN--VSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWG 76 (184)
Q Consensus 3 IgVl~~qG~~~-~~~~~L~~~G~~v~~v~~---~~~l~~--~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlG 76 (184)
|.||.+.+.|. .+.++++++|+.+.++.. .+++.+ +|+||||||+++.++.... .+. +++.+.|+|+||
T Consensus 2 i~ilD~g~~~~~~i~r~l~~~G~~~~i~p~~~~~~~i~~~~~dgiIlsGGp~s~~~~~~~--~~~---~~~~~~~~PvLG 76 (503)
T 2ywb_A 2 VLVLDFGSQYTRLIARRLRELRAFSLILPGDAPLEEVLKHRPQALILSGGPRSVFDPDAP--RPD---PRLFSSGLPLLG 76 (503)
T ss_dssp EEEEESSCTTHHHHHHHHHTTTCCEEEEETTCCHHHHHTTCCSEEEECCCSSCSSCTTCC--CCC---GGGGCSSCCEEE
T ss_pred EEEEECCCcHHHHHHHHHHHCCCEEEEEECCCCHHHHHhcCCCEEEECCCCchhccCCCc--chH---HHHHhCCCCEEE
Confidence 89999988776 467999999998888743 233444 4999999998766532211 122 334467999999
Q ss_pred EchHHHHHHHhhhcccCCCccccCcceeeeee---cccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCC
Q 030035 77 TCAGLIFLANKAVGQKLGGQELVGGLDCTVHR---NFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPD 153 (184)
Q Consensus 77 IC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~r---n~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~ 153 (184)
||+|||+|+.++++ +|.+ ..||..--.+..+ +-+ .+.++.+.+++.|.+.|.++|++
T Consensus 77 IC~G~Qlla~~~GG--------------~v~~~~~~e~G~~~v~~~~~---~l~---~~~~~~~~v~~~H~~~v~~lp~g 136 (503)
T 2ywb_A 77 ICYGMQLLAQELGG--------------RVERAGRAEYGKALLTRHEG---PLF---RGLEGEVQVWMSHQDAVTAPPPG 136 (503)
T ss_dssp ETHHHHHHHHTTTC--------------EEECC---CEEEEECSEECS---GGG---TTCCSCCEEEEECSCEEEECCTT
T ss_pred ECHHHHHHHHHhCC--------------eEeeCCCCccceEEEEecCc---HHh---hcCCCccEEEEECCCccccCCCC
Confidence 99999999999853 2222 1344322222111 111 13345688999999999999999
Q ss_pred cEEEEecCCC
Q 030035 154 VDVLADYPVP 163 (184)
Q Consensus 154 v~vLa~~~~~ 163 (184)
.+++|+.++-
T Consensus 137 ~~v~A~s~~~ 146 (503)
T 2ywb_A 137 WRVVAETEEN 146 (503)
T ss_dssp CEEEEECSSC
T ss_pred CEEEEEECCC
Confidence 9999998763
No 26
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.57 E-value=2.2e-15 Score=139.92 Aligned_cols=140 Identities=19% Similarity=0.171 Sum_probs=91.1
Q ss_pred EEEEEecCCCHHHH-HHHHHHCCCeEEEEcCC---CCC--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 2 VVGVLALQGSFNEH-IAALKRLGVKGVEIRKP---DQL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 2 ~IgVl~~qG~~~~~-~~~L~~~G~~v~~v~~~---~~l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
||+||.++++|..+ .++|+++|+.+.+++.. +++ .++||||||||+++.++.-. ..+. ++..+.|+|||
T Consensus 31 ~I~VLDfg~q~~~liar~lre~Gv~~~ivp~~~~~e~i~~~~~dGIILsGGp~s~~~~~~--~~~~---~~i~~~g~PvL 105 (697)
T 2vxo_A 31 AVVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAEDA--PWFD---PAIFTIGKPVL 105 (697)
T ss_dssp CEEEEEEC--CHHHHHHHHHHTTCCEEEEETTCCHHHHHHHTCSEEEEEECC-------C--CCCC---GGGTTSSCCEE
T ss_pred EEEEEECCCchHHHHHHHHHHCCCEEEEEECCCCHHHHhhcCCCEEEECCCCCcccCccc--hhHH---HHHHhCCCCEE
Confidence 69999999999885 48999999999888643 233 47899999999876653211 1122 23346799999
Q ss_pred EEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEecCCCcE
Q 030035 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLDVGPDVD 155 (184)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~~~~~v~ 155 (184)
|||+|||+|+.++++.. .. ..++.||++.-++...- +-+ .+.++++.+++.|.+.|.++|++.+
T Consensus 106 GIC~G~QlLa~~lGG~v----~~-------~~~~e~G~~~v~~~~~~--~Lf---~~l~~~~~v~~~H~~~V~~lp~g~~ 169 (697)
T 2vxo_A 106 GICYGMQMMNKVFGGTV----HK-------KSVREDGVFNISVDNTC--SLF---RGLQKEEVVLLTHGDSVDKVADGFK 169 (697)
T ss_dssp EEEHHHHHHHHHTTCCB----CC--------------CEEEEECTTS--GGG---TTCCSEEEECCCSSCCBSSCCTTCE
T ss_pred EECHHHHHHHHHhCCeE----ee-------cCCCccceEEEEecCCC--hhh---hcCCccCcceeecccceecCCCCeE
Confidence 99999999999985421 11 12346776655554221 111 1344578999999999999999999
Q ss_pred EEEecCC
Q 030035 156 VLADYPV 162 (184)
Q Consensus 156 vLa~~~~ 162 (184)
++|+.++
T Consensus 170 vlA~s~~ 176 (697)
T 2vxo_A 170 VVARSGN 176 (697)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9999854
No 27
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.56 E-value=3e-14 Score=124.02 Aligned_cols=133 Identities=15% Similarity=0.214 Sum_probs=90.2
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCC---CCC--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKP---DQL--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~---~~l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
+||+|+.+ |.-.++.++|+++|+++++++.. +++ .++|+|||+||+++.... ....+.|++++++++|+|
T Consensus 191 ~~V~viD~-G~k~ni~r~L~~~G~~v~vvp~~~~~e~i~~~~~DGliLsGGPgdp~~~----~~~~~~Ir~~~~~~~PIL 265 (379)
T 1a9x_B 191 FHVVAYDF-GAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPC----DYAITAIQKFLETDIPVF 265 (379)
T ss_dssp EEEEEEES-SCCHHHHHHHHHTTEEEEEEETTCCHHHHHTTCCSEEEECCCSBCSTTC----HHHHHHHHHHTTSCCCEE
T ss_pred CEEEEEEC-CChHHHHHHHHHCCCEEEEEeccCCHHHHhhcCCCEEEEeCCCCChHHH----HHHHHHHHHHHHcCCCEE
Confidence 37899998 66677999999999999988632 222 369999999997544211 124678898888899999
Q ss_pred EEchHHHHHHHhhhcccCCCccccCcceeeeeecccCceeEEeeccccCCccccCCCCCcceeEeeecCceEEe--cCCC
Q 030035 76 GTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASQEGGPETFRGVFIRAPAVLD--VGPD 153 (184)
Q Consensus 76 GIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~--~~~~ 153 (184)
|||+|||||+.+++. ++.++.||.+-...... ++.. + .-+-....|...|.. +|++
T Consensus 266 GIClG~QLLa~A~GG--------------~v~k~~~gh~g~n~pv~----~~~~--g--~v~its~~H~~aV~~~~Lp~~ 323 (379)
T 1a9x_B 266 GICLGHQLLALASGA--------------KTVKMKFGHHGGNHPVK----DVEK--N--VVMITAQNHGFAVDEATLPAN 323 (379)
T ss_dssp EETHHHHHHHHHTTC--------------CEEEEEEEEEEEEEEEE----ETTT--T--EEEEEEEEEEEEECSTTCCTT
T ss_pred EECchHHHHHHHhCc--------------EEEecccccccCceeeE----ecCC--C--cEEEEecCccceEecccCCCC
Confidence 999999999999852 34455555433222111 1110 0 111122247788875 8889
Q ss_pred cEEEEec
Q 030035 154 VDVLADY 160 (184)
Q Consensus 154 v~vLa~~ 160 (184)
++++|..
T Consensus 324 ~~v~a~s 330 (379)
T 1a9x_B 324 LRVTHKS 330 (379)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999987
No 28
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.55 E-value=4.7e-16 Score=130.71 Aligned_cols=85 Identities=14% Similarity=0.213 Sum_probs=63.2
Q ss_pred CEEEEE-ec---CCCHHHHHHHHHHCCC----eEEEE--cC-----------CCC-------CCCCCEEEEcCCchhHHH
Q 030035 1 MVVGVL-AL---QGSFNEHIAALKRLGV----KGVEI--RK-----------PDQ-------LQNVSSLIIPGGESTTMA 52 (184)
Q Consensus 1 m~IgVl-~~---qG~~~~~~~~L~~~G~----~v~~v--~~-----------~~~-------l~~~DglIipGG~~~~~~ 52 (184)
|||+|+ .+ +..+.++.++|+++|+ ++.++ .. +++ +.++|+||||||+++.
T Consensus 26 ~~Iavv~d~~~~~~s~~si~~~L~~~G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dgiil~GG~~~~-- 103 (289)
T 2v4u_A 26 CSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIR-- 103 (289)
T ss_dssp EEEEEEESCSSCCGGGHHHHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHHCSEEEECSCCSST--
T ss_pred eEEEEEecCcCCCccHHHHHHHHHHhhhhhCCceEEEEechhhcccccccCChhhhhhHHHHHhhCCEEEecCCCCch--
Confidence 479998 44 3348899999998865 33333 21 111 5678999999997653
Q ss_pred HHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhhhc
Q 030035 53 RLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVG 90 (184)
Q Consensus 53 ~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~~ 90 (184)
.+. +..+.++++.+.++|+||||+|||+|+.+++.
T Consensus 104 ~~~---~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg 138 (289)
T 2v4u_A 104 GTL---GKLQAISWARTKKIPFLGVXLGMQLAVIEFAR 138 (289)
T ss_dssp THH---HHHHHHHHHHHTTCCEEEETHHHHHHHHHHHH
T ss_pred hHH---HHHHHHHHHHHcCCcEEEECccHHHHHHHHhc
Confidence 222 36788999988999999999999999998864
No 29
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.51 E-value=4.7e-14 Score=119.82 Aligned_cols=87 Identities=24% Similarity=0.462 Sum_probs=65.3
Q ss_pred EEEEEecCCCH------------HHHHHHHHHCCCeEEEEcCCCC-------CCCCCEEEEcCCchh----HHHHHHhcC
Q 030035 2 VVGVLALQGSF------------NEHIAALKRLGVKGVEIRKPDQ-------LQNVSSLIIPGGEST----TMARLAEYH 58 (184)
Q Consensus 2 ~IgVl~~qG~~------------~~~~~~L~~~G~~v~~v~~~~~-------l~~~DglIipGG~~~----~~~~l~~~~ 58 (184)
+|||++.++.. .++.++|+++|+++++++...+ ++++|+||||||.++ .+..+..
T Consensus 32 ~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~~~~i~~~l~~~dglil~GG~~~v~p~~~~~~~~-- 109 (315)
T 1l9x_A 32 IIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVAK-- 109 (315)
T ss_dssp EEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCCCCCTTTCHHHHHHH--
T ss_pred EEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCCHHHHHHHHhcCCEEEEeCCCcccChhhhhHHHH--
Confidence 59999876543 2678999999999999975432 347899999999633 2433332
Q ss_pred ChHHHHHHHHHcC--CcEEEEchHHHHHHHhhhc
Q 030035 59 NLFPALREFVKMG--KPVWGTCAGLIFLANKAVG 90 (184)
Q Consensus 59 ~l~~~l~~~~~~g--~PvlGIC~G~QlLa~~~~~ 90 (184)
.+.+.++++.++| +|+||||+|||+|+.+++.
T Consensus 110 ~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG 143 (315)
T 1l9x_A 110 IFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISG 143 (315)
T ss_dssp HHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCC
Confidence 3566777776654 9999999999999999864
No 30
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.49 E-value=2.4e-14 Score=115.03 Aligned_cols=106 Identities=16% Similarity=0.162 Sum_probs=80.5
Q ss_pred EEEEEecC-C------CHHHHHHHHHHCCCeEEEEc----CC----CCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHH
Q 030035 2 VVGVLALQ-G------SFNEHIAALKRLGVKGVEIR----KP----DQLQNVSSLIIPGGESTTMARLAEYHNLFPALRE 66 (184)
Q Consensus 2 ~IgVl~~q-G------~~~~~~~~L~~~G~~v~~v~----~~----~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~ 66 (184)
||+++-.. | ++.++.++|+++|+++..++ ++ +.+.++|+|++|||....+-+..+..++.+.|++
T Consensus 29 ~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~ 108 (206)
T 3l4e_A 29 TVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILE 108 (206)
T ss_dssp EEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCChHHHHHH
Confidence 67777532 2 45678899999999998884 43 3367899999999976654444444689999999
Q ss_pred HHHcCCcEEEEchHHHHHHHhhhcc----------cCCCccccCcceeeee
Q 030035 67 FVKMGKPVWGTCAGLIFLANKAVGQ----------KLGGQELVGGLDCTVH 107 (184)
Q Consensus 67 ~~~~g~PvlGIC~G~QlLa~~~~~~----------~~~~~~~LG~ldv~v~ 107 (184)
++++|+|++|||+|+|+|++.+... .....++||++|..+.
T Consensus 109 ~~~~G~p~~G~sAGa~~l~~~i~~~~~~~~~~~~~~~~~~~GLGlv~~~i~ 159 (206)
T 3l4e_A 109 EIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTL 159 (206)
T ss_dssp HHHTTCEEEEETHHHHTTSSBCGGGTTTSCGGGCSSCCCCBCCCCSSSEEE
T ss_pred HHHcCCeEEEECHHHHHhcccceeccCCCCccccCCCCcCCcccCCCCEeE
Confidence 9999999999999999999876411 1224578999987665
No 31
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.45 E-value=2.2e-13 Score=125.59 Aligned_cols=140 Identities=18% Similarity=0.186 Sum_probs=89.9
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcCC--CCCCCCCEEEEcCCchhHH----HHHHhcCChHHHHHHHHHcCCc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKP--DQLQNVSSLIIPGGESTTM----ARLAEYHNLFPALREFVKMGKP 73 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~--~~l~~~DglIipGG~~~~~----~~l~~~~~l~~~l~~~~~~g~P 73 (184)
|+|.|+.+...|.. +.++|++.|+++.+++.. .++.++|+|||+||.+... .++. .+.+.|+++.+.++|
T Consensus 447 k~IlviD~gdsf~~~l~~~l~~~G~~v~Vv~~d~~~~~~~~DgIIlsGGPg~p~d~~~p~i~---~~~~lI~~a~~~~iP 523 (645)
T 3r75_A 447 CRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLARYDVVVMGPGPGDPSDAGDPRIA---RLYAWLRHLIDEGKP 523 (645)
T ss_dssp CEEEEEESSCTHHHHHHHHHHHTTCEEEEEETTCCCCGGGCSEEEECCCSSCTTCTTSHHHH---HHHHHHHHHHHHTCC
T ss_pred CEEEEEECCccHHHHHHHHHHHCCCEEEEEECCCcccccCCCEEEECCCCCChhhhhhhhHH---HHHHHHHHHHHCCCC
Confidence 57899988777765 668999999999888643 3356899999999864332 1222 246778888888999
Q ss_pred EEEEchHHHHHHHhhhcccCCCccccCcceeeeeec---ccCceeE-EeeccccCCccccCCCCCcceeEeeecCceEEe
Q 030035 74 VWGTCAGLIFLANKAVGQKLGGQELVGGLDCTVHRN---FFGSQIQ-SFEAELSVPALASQEGGPETFRGVFIRAPAVLD 149 (184)
Q Consensus 74 vlGIC~G~QlLa~~~~~~~~~~~~~LG~ldv~v~rn---~~Grqv~-sf~~~~~~~~~~~~~~~~~~~~a~firap~i~~ 149 (184)
+||||+|||+|+.+++. +|.+. ..|.... ..... +-+ .+.+..+.+.+.|...+..
T Consensus 524 iLGIClG~QlLa~alGG--------------~V~~~~~~~~G~~~~i~~~~~---~l~---~~~~~~~~v~~~h~~~~~~ 583 (645)
T 3r75_A 524 FMAVCLSHQILNAILGI--------------PLVRREVPNQGIQVEIDLFGQ---RER---VGFYNTYVAQTVRDEMDVD 583 (645)
T ss_dssp EEEETHHHHHHHHHTTC--------------CEEEEEEEEEEEEEEEEETTE---EEE---EEEEEEEEEBCSCSEEEET
T ss_pred EEEECHHHHHHHHHhCC--------------EEEcCCCcccccceEEeeecC---cce---ecCCCcEEEEEehhhcccc
Confidence 99999999999999853 12221 1121100 00000 000 0111245555556555666
Q ss_pred cCCCcEEEEecCCC
Q 030035 150 VGPDVDVLADYPVP 163 (184)
Q Consensus 150 ~~~~v~vLa~~~~~ 163 (184)
+|++++++|+.++-
T Consensus 584 lp~g~~v~A~s~dg 597 (645)
T 3r75_A 584 GVGTVAISRDPRTG 597 (645)
T ss_dssp TTEEEEEEECTTTC
T ss_pred CCCCeEEEEEcCCC
Confidence 88999999987653
No 32
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.38 E-value=3.3e-13 Score=112.46 Aligned_cols=84 Identities=11% Similarity=0.161 Sum_probs=62.0
Q ss_pred EEEEE-ec----CCCHHHHHHHHHHCC----CeEEEEc--CC-----------CCCCCCCEEEEcCCchhHHHHHHhcCC
Q 030035 2 VVGVL-AL----QGSFNEHIAALKRLG----VKGVEIR--KP-----------DQLQNVSSLIIPGGESTTMARLAEYHN 59 (184)
Q Consensus 2 ~IgVl-~~----qG~~~~~~~~L~~~G----~~v~~v~--~~-----------~~l~~~DglIipGG~~~~~~~l~~~~~ 59 (184)
||+|+ .+ .+||.++.++|++.| +++.+++ .. +.++++|+||||||++.. .+. +
T Consensus 10 ~Iaivg~y~~~~~dny~S~~~aL~~~g~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~dgiil~GG~~~~--~~~---~ 84 (273)
T 2w7t_A 10 RIAFVGKYLQDAGDTYFSVLQCFEHCQIALQVRLDILYVDSEELEGPNADEARKALLGCDGIFVPGGFGNR--GVD---G 84 (273)
T ss_dssp EEEEEECCHHHHTTTTHHHHHHHHHHHHHHTCCEEEEEEEGGGGSSTTTHHHHHHHHTCSEEEECCCCTTT--THH---H
T ss_pred EEEEEeCCCcCCchHHHHHHHHHHHHHHhcCCceEEeccChhhcccccchhHHHHHhhCCEEEecCCCCCc--Cch---h
Confidence 78998 45 779999988887654 4455543 11 124589999999997553 111 2
Q ss_pred hHHHHHHHHHcCCcEEEEchHHHHHHHhhhc
Q 030035 60 LFPALREFVKMGKPVWGTCAGLIFLANKAVG 90 (184)
Q Consensus 60 l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~~ 90 (184)
..+.++++.+.++|+||||+|||+|+.+++.
T Consensus 85 ~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg 115 (273)
T 2w7t_A 85 KCAAAQVARMNNIPYFGVXLGMQVAVIELSR 115 (273)
T ss_dssp HHHHHHHHHHHTCCEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcEEEECcCHHHHHHHHhC
Confidence 5678888888899999999999999997754
No 33
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.33 E-value=3.8e-12 Score=124.63 Aligned_cols=111 Identities=23% Similarity=0.218 Sum_probs=79.5
Q ss_pred CEEEEEecCCCH--HHHHHHHHHCCCeEEEEc------CCCCCCCCCEEEEcCCchh--HH-------HHHHhcCChHHH
Q 030035 1 MVVGVLALQGSF--NEHIAALKRLGVKGVEIR------KPDQLQNVSSLIIPGGEST--TM-------ARLAEYHNLFPA 63 (184)
Q Consensus 1 m~IgVl~~qG~~--~~~~~~L~~~G~~v~~v~------~~~~l~~~DglIipGG~~~--~~-------~~l~~~~~l~~~ 63 (184)
+||+||.++|.. .++.++|+++|++++.+. ..++|+++|+||||||++. .+ .....+..+.+.
T Consensus 1048 pkVaIi~~~G~N~~~~~~~A~~~aG~~~~~v~~~dl~~~~~~l~~~d~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~ 1127 (1303)
T 3ugj_A 1048 PKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDE 1127 (1303)
T ss_dssp CEEEEEECTTCCCHHHHHHHHHHTTCEEEEEEHHHHHTTSCCGGGCSEEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHH
T ss_pred CEEEEEecCCcCCHHHHHHHHHHhCCceEEEeecccccCcccHhhCCEEEECCCCcchhhhccchhHHHHHHhchhHHHH
Confidence 489999998854 578899999999988773 4567889999999998642 11 112222346677
Q ss_pred HHHHH-HcCCcEEEEchHHHHHHHh-hhcccCCCccccCcceeeeeecccCceeEEe
Q 030035 64 LREFV-KMGKPVWGTCAGLIFLANK-AVGQKLGGQELVGGLDCTVHRNFFGSQIQSF 118 (184)
Q Consensus 64 l~~~~-~~g~PvlGIC~G~QlLa~~-~~~~~~~~~~~LG~ldv~v~rn~~Grqv~sf 118 (184)
+++++ +.++|+||||.|||+|++. ..-+.... ..+..||.-+|-...+
T Consensus 1128 l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~~~-------~p~l~~N~s~~f~~r~ 1177 (1303)
T 3ugj_A 1128 FETFFHRPQTLALGVCNGCQMMSNLRELIPGSEL-------WPRFVRNHSDRFEARF 1177 (1303)
T ss_dssp HHHHHHSSSCEEEEETHHHHHHHTTGGGSTTCTT-------CCEEECCTTSSCEEEE
T ss_pred HHHHHHhCCCcEEEECHHHHHHHHhcCcCCCCCC-------CCeEecCCCCCeEEeC
Confidence 88865 5799999999999999986 22110000 1358899988766665
No 34
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.20 E-value=8.6e-11 Score=99.34 Aligned_cols=143 Identities=20% Similarity=0.176 Sum_probs=83.7
Q ss_pred CEEEEEecCCCHHHHHHHHHH----CC--CeEEEEcCC--C-------------------CCCCCCEEEEcCCchhH---
Q 030035 1 MVVGVLALQGSFNEHIAALKR----LG--VKGVEIRKP--D-------------------QLQNVSSLIIPGGESTT--- 50 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~----~G--~~v~~v~~~--~-------------------~l~~~DglIipGG~~~~--- 50 (184)
||||||.+--+..+..+.|.+ .. +++..++.. + +.+++||+||+||....
T Consensus 36 lkI~ILnlmp~k~~te~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGap~~~~~~ 115 (301)
T 2vdj_A 36 LKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETLSF 115 (301)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHHTCSSSCEEEEEECCCC------------CCEECHHHHTTSCEEEEEECCCTTTTSCG
T ss_pred ceEEEEeCCCCcCchHHHHHHHhcCCCCcEEEEEEeccCCCCCCccHHHHhhcccCcccccccccCEEEECCCCCcCCCc
Confidence 699999987766655444333 23 455545321 1 13679999999996322
Q ss_pred --HHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhhhcccC--CCccccCcceeeeeecccCceeEEeeccccCCc
Q 030035 51 --MARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVGQKL--GGQELVGGLDCTVHRNFFGSQIQSFEAELSVPA 126 (184)
Q Consensus 51 --~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~~~~~--~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~ 126 (184)
...+.+ +.+.++.+.++++|+||||+|+|+++.+..+... ...++.|+...++.. ..-|-
T Consensus 116 ed~~yw~e---l~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~~K~~Gv~~~~~~~-------------~~~pL 179 (301)
T 2vdj_A 116 EEVDYWEE---LKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLKEKMFGVFEHEVRE-------------QHVKL 179 (301)
T ss_dssp GGSTTHHH---HHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECC-------------SSCGG
T ss_pred ccCchHHH---HHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCCCCEEEEEEEEecC-------------CCCcc
Confidence 122222 4556666667899999999999997776654111 123445544433210 01111
Q ss_pred cccCCCCCcceeEeee-----cCceEEecCCCcEEEEecCCC
Q 030035 127 LASQEGGPETFRGVFI-----RAPAVLDVGPDVDVLADYPVP 163 (184)
Q Consensus 127 ~~~~~~~~~~~~a~fi-----rap~i~~~~~~v~vLa~~~~~ 163 (184)
+ .+.+..|.+.-. |...|.++| +++|||+++.-
T Consensus 180 ~---~g~~~~f~~phsr~~~~~~~~v~~~p-ga~vLA~S~~~ 217 (301)
T 2vdj_A 180 L---QGFDELFFAVHSRHTEVRESDIREVK-ELTLLANSEEA 217 (301)
T ss_dssp G---TTCCSEEEEEEEEEEECCHHHHHTCT-TEEEEEEETTT
T ss_pred c---cCCCCceEeeeEeccCcCHHHccCCC-CCEEEEeCCCC
Confidence 1 123345665544 445577775 99999998754
No 35
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.19 E-value=6.3e-11 Score=93.32 Aligned_cols=86 Identities=26% Similarity=0.471 Sum_probs=67.0
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEcCCC----------------------CCCCCCEEEEcCCchhHHHHH
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIRKPD----------------------QLQNVSSLIIPGGESTTMARL 54 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~~----------------------~l~~~DglIipGG~~~~~~~l 54 (184)
|||+||.++| ++....+.|++.|+++.++.... +..++|+||+|||.+. ..+
T Consensus 24 ~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG~~~--~~l 101 (193)
T 1oi4_A 24 KKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSP--DYL 101 (193)
T ss_dssp CEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTTCEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBTHH--HHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCCeEEECCCChHHCCcccCCEEEECCCcCH--HHh
Confidence 5899999988 34556789999999998875321 1246899999999643 344
Q ss_pred HhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 55 AEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 55 ~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.....+.++|+++.++++||.|||.|.++|+++.
T Consensus 102 ~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~aG 135 (193)
T 1oi4_A 102 RGDNRFVTFTRDFVNSGKPVFAICHGPQLLISAD 135 (193)
T ss_dssp TTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHT
T ss_pred hhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCC
Confidence 3333578899999999999999999999999873
No 36
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.14 E-value=4.4e-11 Score=107.44 Aligned_cols=84 Identities=18% Similarity=0.248 Sum_probs=64.1
Q ss_pred EEEEEe----cCCCHHHHHHHHHHCC----Ce--EEEEcCC----------CCCCCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 2 VVGVLA----LQGSFNEHIAALKRLG----VK--GVEIRKP----------DQLQNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 2 ~IgVl~----~qG~~~~~~~~L~~~G----~~--v~~v~~~----------~~l~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
+||++. ++.+|.++.++|+.+| .+ +.++... ++|+++|+||+|||+++. .. .+..
T Consensus 295 ~IalVGKY~~l~DaY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~~~~~~L~~~DgIIlpGG~G~~--~~---~g~i 369 (535)
T 3nva_A 295 NIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWIESTDLESDTKNLNEILGNVNGIIVLPGFGSR--GA---EGKI 369 (535)
T ss_dssp EEEEEESCTTSGGGGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCTTTTTSCSEEEECCCCSST--TH---HHHH
T ss_pred EEEEEecCcCCchhHHHHHHHHHHHHHHcCCCeEEEEecchhccccccchhhhccCCCEEEECCCCCCc--cH---HHHH
Confidence 577764 5678999999998754 34 4444321 457899999999998653 11 2467
Q ss_pred HHHHHHHHcCCcEEEEchHHHHHHHhhhc
Q 030035 62 PALREFVKMGKPVWGTCAGLIFLANKAVG 90 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGIC~G~QlLa~~~~~ 90 (184)
+.|+.+.++++|+||||+|||+|+.++..
T Consensus 370 ~~ir~a~~~~~PiLGIClG~Qll~va~Gg 398 (535)
T 3nva_A 370 KAIKYAREHNIPFLGICFGFQLSIVEFAR 398 (535)
T ss_dssp HHHHHHHHHTCCEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECcchhHHHHHhhc
Confidence 88999988999999999999999998865
No 37
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.14 E-value=2.7e-10 Score=96.73 Aligned_cols=142 Identities=15% Similarity=0.076 Sum_probs=81.4
Q ss_pred CEEEEEecCCCHHHHHH----HHHHCC--CeEEEEcCC-------------------C--CCCCCCEEEEcCCchhH---
Q 030035 1 MVVGVLALQGSFNEHIA----ALKRLG--VKGVEIRKP-------------------D--QLQNVSSLIIPGGESTT--- 50 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~----~L~~~G--~~v~~v~~~-------------------~--~l~~~DglIipGG~~~~--- 50 (184)
||||||.+--+..+..+ .|.... +++..++.. + +.+++||+||+||....
T Consensus 48 lkI~ILnlmp~k~~te~qf~rlL~~~~~qv~v~~~~~~~~~~~~~~~~hl~~~y~~f~~~~~~~~DglIITGsP~~~~~~ 127 (312)
T 2h2w_A 48 LEILILNLMPDKIKTEIQLLRLLGNTPLQVNVTLLYTETHKPKHTPIEHILKFYTTFSAVKDRKFDGFIITGAPVELLPF 127 (312)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHHHSSSSCEEEEEECCSCCCCCSSCHHHHHHHCBCGGGTTTCCEEEEEECCCSCTTSCG
T ss_pred ceEEEEeCCCCcCchHHHHHHHhcCCCCcEEEEEEEccCCCCCCccHHHHhhccCCcccccccCcCEEEECCCCCCCCCC
Confidence 69999998766555443 333334 455555321 1 13679999999996322
Q ss_pred --HHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhhhcccC--CCccccCcceeeeeecccCceeEEeeccccCCc
Q 030035 51 --MARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVGQKL--GGQELVGGLDCTVHRNFFGSQIQSFEAELSVPA 126 (184)
Q Consensus 51 --~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~~~~~--~~~~~LG~ldv~v~rn~~Grqv~sf~~~~~~~~ 126 (184)
...+.+ +.+.++.+.++++|+||||+|+|+++.+..+... ...++.|+...++.. .-|-
T Consensus 128 ed~~yw~e---l~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~~~K~~Gv~~~~~~~--------------~~pL 190 (312)
T 2h2w_A 128 EEVDYWEE---LTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELPQKLSGVYKHRVAK--------------DSVL 190 (312)
T ss_dssp GGSTTHHH---HHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEEEEEEEEEEEEESS--------------CCGG
T ss_pred ccCchHHH---HHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccCCCCEEEEEEEEEcC--------------CCcc
Confidence 122222 4556666667899999999999997777654211 133455555443221 1121
Q ss_pred cccCCCCCcceeEeeecC-----ceEEecCCCcEEEEecCCC
Q 030035 127 LASQEGGPETFRGVFIRA-----PAVLDVGPDVDVLADYPVP 163 (184)
Q Consensus 127 ~~~~~~~~~~~~a~fira-----p~i~~~~~~v~vLa~~~~~ 163 (184)
+ .+.+..|.+.-.|- ..|... ++++|||+++.-
T Consensus 191 ~---~g~~~~f~vphsr~~e~~~~~v~~~-pga~vLA~S~~~ 228 (312)
T 2h2w_A 191 F---RGHDDFFWAPHSRYTEVKKEDIDKV-PELEILAESDEA 228 (312)
T ss_dssp G---TTCCSEEEEEEEEEEECCHHHHTTC-C-CEEEEEETTT
T ss_pred c---cCCCCceEeeEEeccccCHHHccCC-CCCEEEEcCCCC
Confidence 1 13334566655432 224444 589999998754
No 38
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=99.13 E-value=1.9e-10 Score=88.19 Aligned_cols=85 Identities=20% Similarity=0.296 Sum_probs=66.7
Q ss_pred CEEEEEecCC-C---HHHHHHHHHHCCCeEEEEcCC------------------CCC--CCCCEEEEcCCchhHHHHHHh
Q 030035 1 MVVGVLALQG-S---FNEHIAALKRLGVKGVEIRKP------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 1 m~IgVl~~qG-~---~~~~~~~L~~~G~~v~~v~~~------------------~~l--~~~DglIipGG~~~~~~~l~~ 56 (184)
|||+||.+.| + +....+.|++.|+++.++... +++ .++|.|++|||.+. ..+..
T Consensus 3 ~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~--~~~~~ 80 (168)
T 3l18_A 3 MKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYSVNVDLTFEEVDPDEFDALVLPGGKAP--EIVRL 80 (168)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSEEEECTTSCEEEECEEGGGCCGGGCSEEEECCBSHH--HHHTT
T ss_pred cEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCCEEecCCCcEEeccCChhHCCHhhCCEEEECCCcCH--HHhcc
Confidence 7999999998 3 444678899999998877421 222 25999999999743 23444
Q ss_pred cCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
+..+.++|+++.++++||.+||.|.++|+++
T Consensus 81 ~~~l~~~l~~~~~~~k~i~aiC~G~~~La~a 111 (168)
T 3l18_A 81 NEKAVMITRRMFEDDKPVASICHGPQILISA 111 (168)
T ss_dssp CHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEECHhHHHHHHC
Confidence 4457899999999999999999999999986
No 39
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=98.97 E-value=1.9e-09 Score=84.75 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=67.1
Q ss_pred EEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC-------------------CCC---CCCCEEEEcCCchhHHHHHH
Q 030035 2 VVGVLALQG----SFNEHIAALKRLGVKGVEIRKP-------------------DQL---QNVSSLIIPGGESTTMARLA 55 (184)
Q Consensus 2 ~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~-------------------~~l---~~~DglIipGG~~~~~~~l~ 55 (184)
||+||.+.| ++....+.|++.|+++.++... +++ .++|.||+|||.... ..+.
T Consensus 5 ~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~-~~l~ 83 (197)
T 2rk3_A 5 RALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGA-QNLS 83 (197)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHH-HHHH
T ss_pred EEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhH-HHhh
Confidence 899999998 4555678999999998877421 123 578999999997432 2344
Q ss_pred hcCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 56 EYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 56 ~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
....+.++|+++.+++++|.+||.|.++|+++
T Consensus 84 ~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 115 (197)
T 2rk3_A 84 ESAAVKEILKEQENRKGLIATICAGPTALLAH 115 (197)
T ss_dssp HCHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred hCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 44457899999999999999999999999987
No 40
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=98.95 E-value=5.8e-10 Score=101.03 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=56.2
Q ss_pred cCCCHHHHHHHHHH----CCCeEEEEc--CC--------CCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCc
Q 030035 8 LQGSFNEHIAALKR----LGVKGVEIR--KP--------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (184)
Q Consensus 8 ~qG~~~~~~~~L~~----~G~~v~~v~--~~--------~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~P 73 (184)
+..+|.++.++|++ .|+++.+++ +. +.+.++|+||||||+++.. .. +..+.++.+.+.++|
T Consensus 312 l~D~y~Sv~~aL~~~g~~~g~~v~I~~~d~~~~~~~~~~~~L~~~DGIILpGGfGd~~--~~---g~i~~ir~a~e~~iP 386 (550)
T 1vco_A 312 MPDAYLSLLEALRHAGIKNRARVEVKWVDAESLEAADLEEAFRDVSGILVPGGFGVRG--IE---GKVRAAQYARERKIP 386 (550)
T ss_dssp --CTTHHHHHHHHHHHHHTTEEEEEEEEEGGGC--CCHHHHTTTCSCEEECCCCSSTT--HH---HHHHHHHHHHHTTCC
T ss_pred EEecHHHHHHHHHHHHHHcCCeEEEEEeCccccccchHHHHHhcCCEEEECCCCCCcc--hh---hhHHHHHHHHHCCCc
Confidence 45677777777665 456776663 21 1267899999999976541 11 246788888888999
Q ss_pred EEEEchHHHHHHHhhhc
Q 030035 74 VWGTCAGLIFLANKAVG 90 (184)
Q Consensus 74 vlGIC~G~QlLa~~~~~ 90 (184)
+||||+|||+|+.++..
T Consensus 387 iLGICLGmQlL~~a~Gg 403 (550)
T 1vco_A 387 YLGICLGLQIAVIEFAR 403 (550)
T ss_dssp EEEETHHHHHHHHHHHH
T ss_pred EEEECcCHHHHHHHhCc
Confidence 99999999999998864
No 41
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=98.94 E-value=1.3e-09 Score=85.34 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=62.5
Q ss_pred EEEEecCC----CHHHHHHHHHHCCCeEEEEcCC------------------CC--CCCCCEEEEcCCchhHHHHHHhcC
Q 030035 3 VGVLALQG----SFNEHIAALKRLGVKGVEIRKP------------------DQ--LQNVSSLIIPGGESTTMARLAEYH 58 (184)
Q Consensus 3 IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~------------------~~--l~~~DglIipGG~~~~~~~l~~~~ 58 (184)
|.||..+| ++....+.|++.|+++.++... ++ ..++|+|++|||.+.. .+..+.
T Consensus 11 v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~g~~--~l~~~~ 88 (177)
T 4hcj_A 11 LYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIGTAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGIGCI--TLWDDW 88 (177)
T ss_dssp EEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSEEEEETTSCEEEECEEGGGCCGGGCSEEEECCSGGGG--GGTTCH
T ss_pred EEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCCeEeeCCCCEEecCccHHHCCHhHCCEEEECCCccHH--HHhhCH
Confidence 56666555 3444668899999999887421 22 2478999999997543 343334
Q ss_pred ChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 59 NLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 59 ~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
.+.++|+++.++++||.+||.|.++|+++
T Consensus 89 ~~~~~l~~~~~~~k~iaaIC~g~~~La~a 117 (177)
T 4hcj_A 89 RTQGLAKLFLDNQKIVAGIGSGVVIMANA 117 (177)
T ss_dssp HHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred HHHHHHHHHHHhCCEEEEecccHHHHHHC
Confidence 57889999999999999999999999986
No 42
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=98.93 E-value=4.7e-09 Score=83.24 Aligned_cols=86 Identities=21% Similarity=0.263 Sum_probs=66.1
Q ss_pred CEEEEEecCCC----HHHHHHHHHHCCCeEEEEcCCC---------------------C--CCCCCEEEEcCCchhHHHH
Q 030035 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRKPD---------------------Q--LQNVSSLIIPGGESTTMAR 53 (184)
Q Consensus 1 m~IgVl~~qG~----~~~~~~~L~~~G~~v~~v~~~~---------------------~--l~~~DglIipGG~~~~~~~ 53 (184)
|||+||.+.|- +....+.|++.|+++.++.... + ..++|.||+|||.... ..
T Consensus 3 ~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~-~~ 81 (205)
T 2ab0_A 3 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGA-EC 81 (205)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHH-HH
T ss_pred cEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccH-HH
Confidence 38999999883 4445688999999988774211 1 2478999999996432 23
Q ss_pred HHhcCChHHHHHHHHHcCCcEEEEchHH-HHHHHh
Q 030035 54 LAEYHNLFPALREFVKMGKPVWGTCAGL-IFLANK 87 (184)
Q Consensus 54 l~~~~~l~~~l~~~~~~g~PvlGIC~G~-QlLa~~ 87 (184)
+.....+.++|+++.+++++|.+||.|. ++|+++
T Consensus 82 l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~a 116 (205)
T 2ab0_A 82 FRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPH 116 (205)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTT
T ss_pred hccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHC
Confidence 4444457899999999999999999999 999875
No 43
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=98.92 E-value=6.7e-09 Score=81.04 Aligned_cols=84 Identities=26% Similarity=0.314 Sum_probs=67.1
Q ss_pred CEEEEEecCC----CHHHHHHHHHH-CCCeEEEEcCC------------------CCCC--CCCEEEEcCCchhHHHHHH
Q 030035 1 MVVGVLALQG----SFNEHIAALKR-LGVKGVEIRKP------------------DQLQ--NVSSLIIPGGESTTMARLA 55 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~-~G~~v~~v~~~------------------~~l~--~~DglIipGG~~~~~~~l~ 55 (184)
|||+||.+.| ++....+.|++ .|+++.++... +++. ++|.||+|||.+.. +.
T Consensus 2 ~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~---~~ 78 (188)
T 2fex_A 2 TRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGMPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLSWE---KG 78 (188)
T ss_dssp CEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECSEEGGGCCTTTCSEEEECCBSHHH---HT
T ss_pred cEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCCceeeCCCcEEeccccHHHCCcccCCEEEECCCCccc---cc
Confidence 3899999988 56667788998 89988877421 1233 79999999997533 23
Q ss_pred hcCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 56 EYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 56 ~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
....+.++|+++.+++++|.+||.|.++|+++
T Consensus 79 ~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~a 110 (188)
T 2fex_A 79 TAADLGGLVKRFRDRDRLVAGICAAASALGGT 110 (188)
T ss_dssp CCCCCHHHHHHHHHTTCEEEEETHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 44568999999999999999999999999987
No 44
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=98.91 E-value=9.7e-09 Score=80.25 Aligned_cols=85 Identities=22% Similarity=0.270 Sum_probs=65.4
Q ss_pred EEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC-------------------CCC--CCCCEEEEcCCchhHHHHHHh
Q 030035 2 VVGVLALQG----SFNEHIAALKRLGVKGVEIRKP-------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 2 ~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~-------------------~~l--~~~DglIipGG~~~~~~~l~~ 56 (184)
||+||...| ++....+.|++.|+++.++... +++ .++|.||+|||.... ..+..
T Consensus 7 kv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~-~~~~~ 85 (190)
T 4e08_A 7 SALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGS-NAMGE 85 (190)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHH-HHHHH
T ss_pred EEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEECCCCHHHCCcccCCEEEECCCChHH-HHhhh
Confidence 799999988 3444568999999999887421 122 368999999995322 23444
Q ss_pred cCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
+..+.++|+++.+++++|.+||.|.++|+++
T Consensus 86 ~~~~~~~l~~~~~~~k~i~aiC~G~~~La~a 116 (190)
T 4e08_A 86 SSLVGDLLRSQESGGGLIAAICAAPTVLAKH 116 (190)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 4457899999999999999999999999986
No 45
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=98.89 E-value=3.9e-09 Score=82.28 Aligned_cols=87 Identities=22% Similarity=0.378 Sum_probs=64.7
Q ss_pred CEEEEEecCCC----HHHHHHHHHHCCCeEEEEcCC-----------------------CCC--CCCCEEEEcCCchhHH
Q 030035 1 MVVGVLALQGS----FNEHIAALKRLGVKGVEIRKP-----------------------DQL--QNVSSLIIPGGESTTM 51 (184)
Q Consensus 1 m~IgVl~~qG~----~~~~~~~L~~~G~~v~~v~~~-----------------------~~l--~~~DglIipGG~~~~~ 51 (184)
|||+||.+.|- +....+.|++.|+++.++... +++ .++|.||+|||....
T Consensus 10 ~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~- 88 (190)
T 2vrn_A 10 KKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPGEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNP- 88 (190)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSSEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHH-
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCccccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhH-
Confidence 58999999883 444668899999888766321 122 368999999996322
Q ss_pred HHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 52 ARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 52 ~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
..+.....+.++|+++.++++||.+||.|.++|+++.
T Consensus 89 ~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~aG 125 (190)
T 2vrn_A 89 DKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETG 125 (190)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTT
T ss_pred HHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhCc
Confidence 2333333578899999999999999999999999873
No 46
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=98.86 E-value=1.8e-09 Score=97.77 Aligned_cols=78 Identities=19% Similarity=0.280 Sum_probs=57.8
Q ss_pred cCCCHHHHHHHHHHCCC----eEEEEc--C------C-CCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcE
Q 030035 8 LQGSFNEHIAALKRLGV----KGVEIR--K------P-DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 8 ~qG~~~~~~~~L~~~G~----~v~~v~--~------~-~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pv 74 (184)
+..+|.++.++|+++|+ ++.+.+ . . +.+.++|+||||||+++.. .. +..+.++++.+.++|+
T Consensus 301 l~D~y~Si~~aL~~~G~~~~~~V~i~~~d~e~i~~~~~~~l~~~DGIilsGGpg~~~--~~---g~~~~i~~a~~~~~Pi 375 (545)
T 1s1m_A 301 LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRG--VE---GMITTARFARENNIPY 375 (545)
T ss_dssp SGGGGHHHHHHHHHHHHHHTEEEEEEEEEHHHHHHHCTTTTTTCSEEEECCCCSSTT--HH---HHHHHHHHHHHTTCCE
T ss_pred EEEHHHHHHHHHHHhCcccCCeEEEccCCHHHhhhhhhhhhhcCCEEEECCCCCCcc--ch---hhHHHHHHHHHCCCcE
Confidence 34578888899988875 334332 1 1 2367899999999976542 11 3567888888889999
Q ss_pred EEEchHHHHHHHhhhc
Q 030035 75 WGTCAGLIFLANKAVG 90 (184)
Q Consensus 75 lGIC~G~QlLa~~~~~ 90 (184)
||||+|||+|+.++..
T Consensus 376 LGIClG~Qll~va~Gg 391 (545)
T 1s1m_A 376 LGICLGMQVALIDYAR 391 (545)
T ss_dssp EEETHHHHHHHHHHHH
T ss_pred EEECChHHHHHHHhCC
Confidence 9999999999988754
No 47
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=98.83 E-value=5.5e-09 Score=83.33 Aligned_cols=87 Identities=18% Similarity=0.136 Sum_probs=63.0
Q ss_pred EEEEEecCC----CHHHHHHHHHHCC-------CeEEEEcCC------------------CCCCCCCEEEEcCCchhHHH
Q 030035 2 VVGVLALQG----SFNEHIAALKRLG-------VKGVEIRKP------------------DQLQNVSSLIIPGGESTTMA 52 (184)
Q Consensus 2 ~IgVl~~qG----~~~~~~~~L~~~G-------~~v~~v~~~------------------~~l~~~DglIipGG~~~~~~ 52 (184)
||+||.++| ++....+.|+.++ +++.++... ++++++|.||+|||......
T Consensus 10 ~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~~v~~~~G~~v~~d~~~~~~~~~D~livpGg~~~~~~ 89 (209)
T 3er6_A 10 RVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGGISVQPTAQWQSFDFTNILIIGSIGDPLES 89 (209)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSCEEETTTEEEECSSCGGGCSCCSEEEECCCSCHHHH
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCCceecCCCeEEeCCcCccccCCCCEEEECCCCCchhh
Confidence 799999998 3444567776653 666665311 23467999999999643322
Q ss_pred HHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 53 RLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 53 ~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.+.....+.++|+++.+++++|.+||.|..+|+++.
T Consensus 90 ~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aG 125 (209)
T 3er6_A 90 LDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAG 125 (209)
T ss_dssp GGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcC
Confidence 222233478899999999999999999999999873
No 48
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=98.78 E-value=1.4e-08 Score=82.21 Aligned_cols=86 Identities=19% Similarity=0.221 Sum_probs=65.6
Q ss_pred CEEEEEecCC----CHHHHHHHHHH-CCCeEEEEcC------------------CCCCCCCCEEEEcCCchhHHHHHHhc
Q 030035 1 MVVGVLALQG----SFNEHIAALKR-LGVKGVEIRK------------------PDQLQNVSSLIIPGGESTTMARLAEY 57 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~-~G~~v~~v~~------------------~~~l~~~DglIipGG~~~~~~~l~~~ 57 (184)
|||+||.+.| ++....+.|++ .++++.++.. .++++++|.|++|||.+.. .+..+
T Consensus 6 ~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~~V~~~~G~~v~~d~~l~~~~~~D~livpGG~g~~--~~~~~ 83 (231)
T 3noq_A 6 VQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPGPVVASSGLVLQATTSFADCPPLDVICIPGGTGVG--ALMED 83 (231)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSEEEECTTSCEEEECEETTTCCCCSEEEECCSTTHH--HHTTC
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCCcEEcCCCCEEecccChhHCCcCCEEEECCCCChh--hhccC
Confidence 3799999998 34446688888 6777776631 1345679999999996542 34333
Q ss_pred CChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 58 HNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 58 ~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
..+.++|+++.+++++|.+||.|..+|+++.
T Consensus 84 ~~l~~~lr~~~~~g~~v~aiC~G~~~La~aG 114 (231)
T 3noq_A 84 PQALAFIRQQAARARYVTSVSTGSLVLGAAG 114 (231)
T ss_dssp HHHHHHHHHHHTTCSEEEEETTHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEEECHHHHHHHHcC
Confidence 4578999999999999999999999999873
No 49
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=98.77 E-value=1.1e-08 Score=81.84 Aligned_cols=86 Identities=19% Similarity=0.255 Sum_probs=64.1
Q ss_pred CEEEEEecCC----CHHHHHHHHHHC--CCeEEEEcCC------------------CCCCCCCEEEEcCCchhHHHHHHh
Q 030035 1 MVVGVLALQG----SFNEHIAALKRL--GVKGVEIRKP------------------DQLQNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~--G~~v~~v~~~------------------~~l~~~DglIipGG~~~~~~~l~~ 56 (184)
|||+||.+.| ++....+.|++. ++++.++... ++.+.+|.||+|||.+.. .+..
T Consensus 5 ~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~~V~~~~G~~v~~d~~~~~~~~~D~livpGG~~~~--~~~~ 82 (211)
T 3mgk_A 5 YRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGGLVESSQKVRVETSLYTRDENIEKILFVPGGSGTR--EKVN 82 (211)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCEEEECTTCCEEEEBCCCCCSSSEEEEEECCSTHHH--HHTT
T ss_pred eEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCCeEecCCCcEEEeccchhhCCCCCEEEECCCcchh--hhcC
Confidence 4899999998 344466788877 4677666311 233458999999997432 3433
Q ss_pred cCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
+..+.++|+++.+++++|.+||.|..+|+++.
T Consensus 83 ~~~~~~~l~~~~~~~k~iaaiC~G~~~La~aG 114 (211)
T 3mgk_A 83 DDNFINFIGNMVKESKYIISVCTGSALLSKAG 114 (211)
T ss_dssp CHHHHHHHHHHHHHCSEEEECTTHHHHHHHTT
T ss_pred CHHHHHHHHHHHHcCCEEEEEchHHHHHHhcC
Confidence 33578999999999999999999999999863
No 50
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=98.72 E-value=2.9e-08 Score=78.93 Aligned_cols=85 Identities=21% Similarity=0.303 Sum_probs=65.3
Q ss_pred EEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC-------------------CCC--CCCCEEEEcCCchhHHHHHHh
Q 030035 2 VVGVLALQG----SFNEHIAALKRLGVKGVEIRKP-------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 2 ~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~-------------------~~l--~~~DglIipGG~~~~~~~l~~ 56 (184)
||+||.+.| ++....+.|++.|+++.++... +++ .++|.||+|||.... ..+..
T Consensus 11 ~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~-~~l~~ 89 (208)
T 3ot1_A 11 RILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGA-QAFAD 89 (208)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHH-HHHHT
T ss_pred eEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHH-HHHhh
Confidence 899999998 3444668899999988877421 122 368999999997422 23444
Q ss_pred cCChHHHHHHHHHcCCcEEEEchHH-HHHHHh
Q 030035 57 YHNLFPALREFVKMGKPVWGTCAGL-IFLANK 87 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~PvlGIC~G~-QlLa~~ 87 (184)
+..+.++|+++.+++++|.+||.|. .+|+++
T Consensus 90 ~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~a 121 (208)
T 3ot1_A 90 STALLALIDAFSQQGKLVAAICATPALVFAKQ 121 (208)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTHHHHTTTTT
T ss_pred CHHHHHHHHHHHHcCCEEEEEChhHHHHHHHC
Confidence 4457899999999999999999999 899875
No 51
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=98.71 E-value=4.6e-08 Score=78.03 Aligned_cols=84 Identities=20% Similarity=0.268 Sum_probs=64.5
Q ss_pred EEEEEecCC----CHHHHHHHHH--------HCCCeEEEEcCC------------------CCCC--CCCEEEEcCCchh
Q 030035 2 VVGVLALQG----SFNEHIAALK--------RLGVKGVEIRKP------------------DQLQ--NVSSLIIPGGEST 49 (184)
Q Consensus 2 ~IgVl~~qG----~~~~~~~~L~--------~~G~~v~~v~~~------------------~~l~--~~DglIipGG~~~ 49 (184)
||+||.+.| ++....+.|+ +.++++.++... ++++ ++|.||+|||...
T Consensus 7 ~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG~~~ 86 (212)
T 3efe_A 7 KAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKEMITTMGGLRIKPDISLDECTLESKDLLILPGGTTW 86 (212)
T ss_dssp CEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSCCEECTTCCEECCSEEGGGCCCCTTCEEEECCCSCT
T ss_pred EEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCCeEEcCCCCEEecCcCHHHCCccCCCEEEECCCCcc
Confidence 699999988 5666778888 667888776421 2333 7999999999643
Q ss_pred HHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 50 TMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 50 ~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.. ..+..+.++|+++.+++++|.+||.|..+|+++.
T Consensus 87 ~~---~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aG 122 (212)
T 3efe_A 87 SE---EIHQPILERIGQALKIGTIVAAICGATDALANMG 122 (212)
T ss_dssp TS---GGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHTT
T ss_pred cc---ccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHcC
Confidence 21 2223478899999999999999999999999863
No 52
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=98.70 E-value=4.2e-08 Score=84.88 Aligned_cols=86 Identities=26% Similarity=0.402 Sum_probs=67.0
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEcCCC----------------------------------C--CCCCCE
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIRKPD----------------------------------Q--LQNVSS 40 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~~----------------------------------~--l~~~Dg 40 (184)
+||+||...| ++....+.|++.|+++.++.... + ..++|.
T Consensus 13 ~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 92 (396)
T 3uk7_A 13 RTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKYDG 92 (396)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGCSE
T ss_pred CeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccCCE
Confidence 3799999988 34446788999999998874211 1 146899
Q ss_pred EEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 41 LIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 41 lIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
|++|||.+.. .+..+..+.++|+++.+++++|.+||.|.++|+++.
T Consensus 93 livpGG~~~~--~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~aG 138 (396)
T 3uk7_A 93 LVIPGGRAPE--YLALTASVVELVKEFSRSGKPIASICHGQLILAAAD 138 (396)
T ss_dssp EEECCBSHHH--HHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTT
T ss_pred EEECCCcchh--hcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhcc
Confidence 9999997532 344444578899999999999999999999999874
No 53
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=98.70 E-value=3.8e-08 Score=77.57 Aligned_cols=87 Identities=21% Similarity=0.293 Sum_probs=61.8
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEc---CC------------------CCC-------CCCCEEEEcCCch
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIR---KP------------------DQL-------QNVSSLIIPGGES 48 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~---~~------------------~~l-------~~~DglIipGG~~ 48 (184)
|||+||.+.| ++....+.|++.|+++..+. .. +++ ++||.||||||..
T Consensus 5 ~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG~~ 84 (194)
T 4gdh_A 5 VKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGGL 84 (194)
T ss_dssp CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTTCEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCCHH
T ss_pred CEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCCceEecCCCceeeccccHhhCCccccccccCCEEEECCCch
Confidence 5899999998 34556788999998876552 10 111 2479999999964
Q ss_pred hHHHHHHhcCChHHHHHHHHHc-CCcEEEEchHHHHHHHhh
Q 030035 49 TTMARLAEYHNLFPALREFVKM-GKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 49 ~~~~~l~~~~~l~~~l~~~~~~-g~PvlGIC~G~QlLa~~~ 88 (184)
.. ..+..+..+.++|+++.++ ++++..||.|..++...+
T Consensus 85 ~~-~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~l~~agl 124 (194)
T 4gdh_A 85 GA-KTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTSG 124 (194)
T ss_dssp HH-HHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGHHHHHTT
T ss_pred hH-hHhhhCHHHHHHHHHhhhcCCceEEeecccccchhhce
Confidence 32 3455545578899998764 799999999996655443
No 54
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.67 E-value=3e-08 Score=76.27 Aligned_cols=87 Identities=22% Similarity=0.323 Sum_probs=60.5
Q ss_pred CEEEEEecC---C-CHHHHHHHHHHCCCeEEEEcCC-------------------CCC----CCCCEEEEcCC--c-hhH
Q 030035 1 MVVGVLALQ---G-SFNEHIAALKRLGVKGVEIRKP-------------------DQL----QNVSSLIIPGG--E-STT 50 (184)
Q Consensus 1 m~IgVl~~q---G-~~~~~~~~L~~~G~~v~~v~~~-------------------~~l----~~~DglIipGG--~-~~~ 50 (184)
|||+||.+. | .+.+..+.+.+.|+++.++... +++ .++|.||+||| . +..
T Consensus 3 ~~v~ill~~~~~g~~~~~~~e~~~~~~~~v~~vs~~~~~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG~~~~~~~ 82 (175)
T 3cne_A 3 KKVAVLAVNPVNGCGLFQYLEAFFENGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVFQ 82 (175)
T ss_dssp CEEEEEECSSBCHHHHHHHHHHHHHTTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGGG
T ss_pred cEEEEEEecCcCCCccchhhheeeeCCCEEEEEECCCCCceecCCCeEEEeccCHHHhccCcccCCEEEECCCcCcccHH
Confidence 489999988 5 1123334444788888877421 223 56899999999 5 332
Q ss_pred -HHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 51 -MARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 51 -~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
+.....+..+.++|+++.+++++|.+||.|.++|+++
T Consensus 83 ~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 120 (175)
T 3cne_A 83 QYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFT 120 (175)
T ss_dssp GCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred HHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 1100022247889999999999999999999999986
No 55
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=98.66 E-value=3.8e-08 Score=79.45 Aligned_cols=88 Identities=24% Similarity=0.342 Sum_probs=64.5
Q ss_pred CEEEEEec-----CCC----HHHHHHHHHHCCCeEEEEcCC------------------------------------CCC
Q 030035 1 MVVGVLAL-----QGS----FNEHIAALKRLGVKGVEIRKP------------------------------------DQL 35 (184)
Q Consensus 1 m~IgVl~~-----qG~----~~~~~~~L~~~G~~v~~v~~~------------------------------------~~l 35 (184)
+||+||.. .|- +....+.|++.|+++.++... +++
T Consensus 7 ~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~~~g~~i~~~~~~~~~~~~l~~~ 86 (232)
T 1vhq_A 7 KKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQA 86 (232)
T ss_dssp CEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGC
T ss_pred CeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCcccccccccchhhhhhhhHHHHHhhhcCCCCHHHc
Confidence 37999988 772 344568899999998877421 111
Q ss_pred --CCCCEEEEcCCchhH--HHHHH-------hcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 36 --QNVSSLIIPGGESTT--MARLA-------EYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 36 --~~~DglIipGG~~~~--~~~l~-------~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
+++|+||+|||.+.. +..+. .+..+.++|+++.++|++|.+||.|.++|++++
T Consensus 87 ~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~aL 150 (232)
T 1vhq_A 87 DAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIF 150 (232)
T ss_dssp CGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHHC
T ss_pred CcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHHh
Confidence 368999999997542 11111 123478899999999999999999999999984
No 56
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=98.66 E-value=6.3e-08 Score=83.76 Aligned_cols=86 Identities=24% Similarity=0.359 Sum_probs=66.6
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC----------------------------------CC--CCCCCE
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIRKP----------------------------------DQ--LQNVSS 40 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~----------------------------------~~--l~~~Dg 40 (184)
+||+||...| ++....+.|++.|+++.++... ++ ..++|.
T Consensus 206 ~ki~ill~dg~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~ 285 (396)
T 3uk7_A 206 KRILFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDA 285 (396)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHHHTCEEEEECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCSE
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHCCCEEEEECCCCCCCcccccccccccccchhhhcCCceeeccCCHHHCCcccCCE
Confidence 4799999988 3445678899999998877421 11 236899
Q ss_pred EEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 41 LIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 41 lIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
||+|||.+.. .+.....+.++|+++.+++++|.+||.|.++|+++.
T Consensus 286 livpGg~~~~--~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~aG 331 (396)
T 3uk7_A 286 LVIPGGRAPE--YLALNEHVLNIVKEFMNSEKPVASICHGQQILAAAG 331 (396)
T ss_dssp EEECCBSHHH--HHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHTT
T ss_pred EEECCCcchh--hhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHcC
Confidence 9999997532 344444578899999999999999999999999873
No 57
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=98.65 E-value=6.2e-08 Score=77.24 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=64.1
Q ss_pred EEEEEecCC----CHHHHHHHHHHC-CCeEEEEcCC-----------------CCCC-CCCEEEEcCCchhHHHHHHhcC
Q 030035 2 VVGVLALQG----SFNEHIAALKRL-GVKGVEIRKP-----------------DQLQ-NVSSLIIPGGESTTMARLAEYH 58 (184)
Q Consensus 2 ~IgVl~~qG----~~~~~~~~L~~~-G~~v~~v~~~-----------------~~l~-~~DglIipGG~~~~~~~l~~~~ 58 (184)
||+||.+.| ++....+.|++. ++++.++... +++. ++|.||+|||.+... ...
T Consensus 5 kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~V~~~~G~~v~~d~~l~~~~~~~D~livpGG~~~~~----~~~ 80 (206)
T 3f5d_A 5 KALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPIVSSIGGFKTSVDYIIGLEPANFNLLVMIGGDSWSN----DNK 80 (206)
T ss_dssp EEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSEEEBTTSCEEECSEETTSSCSCCSEEEECCBSCCCC----CCH
T ss_pred EEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCCEEecCCcEEecCcChhhCCcCCCEEEEcCCCChhh----cCH
Confidence 699999988 455677889887 8887766421 2333 799999999864322 223
Q ss_pred ChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 59 NLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 59 ~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.+.++|+++.+++++|.+||.|.++|+++.
T Consensus 81 ~l~~~l~~~~~~gk~iaaiC~G~~~La~aG 110 (206)
T 3f5d_A 81 KLLHFVKTAFQKNIPIAAICGAVDFLAKNG 110 (206)
T ss_dssp HHHHHHHHHHHTTCCEEEETHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCEEEEECHHHHHHHHcC
Confidence 478899999999999999999999999873
No 58
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=98.63 E-value=8.1e-08 Score=78.58 Aligned_cols=86 Identities=21% Similarity=0.276 Sum_probs=63.6
Q ss_pred EEEEEec-----CC----CHHHHHHHHHHCCCeEEEEcCC------------------------------------CCC-
Q 030035 2 VVGVLAL-----QG----SFNEHIAALKRLGVKGVEIRKP------------------------------------DQL- 35 (184)
Q Consensus 2 ~IgVl~~-----qG----~~~~~~~~L~~~G~~v~~v~~~------------------------------------~~l- 35 (184)
||+||.. .| ++....+.|++.|+++.++... +++
T Consensus 25 kV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~s~g~~v~~d~~~~~~~~~l~dv~ 104 (242)
T 3l3b_A 25 NSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIEQIR 104 (242)
T ss_dssp EEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGGGCC
T ss_pred EEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCcccccccccCccccccCCeEEecchhccccCCChHHCC
Confidence 7999886 66 2334568899999998876421 112
Q ss_pred -CCCCEEEEcCCchhHHHHH-----------HhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 36 -QNVSSLIIPGGESTTMARL-----------AEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 36 -~~~DglIipGG~~~~~~~l-----------~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
+++|+||||||.+.. ..| ..+..+.++|+++.++++||.+||.|.++|+++.
T Consensus 105 ~~~~D~livPGG~~~~-~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 105 VEEFDMLVIPGGYGVA-KNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALL 168 (242)
T ss_dssp GGGCSEEEECCCHHHH-HHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred cccCCEEEEcCCcchh-hhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhC
Confidence 368999999997542 112 1123478899999999999999999999999875
No 59
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=98.61 E-value=1.1e-07 Score=78.20 Aligned_cols=86 Identities=17% Similarity=0.268 Sum_probs=64.2
Q ss_pred CEEEEEecCC----CHHHHHHHH-HHCCCeEEEEcCC------------------CCC-CCCCEEEEcCCc-hhHHHHHH
Q 030035 1 MVVGVLALQG----SFNEHIAAL-KRLGVKGVEIRKP------------------DQL-QNVSSLIIPGGE-STTMARLA 55 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L-~~~G~~v~~v~~~------------------~~l-~~~DglIipGG~-~~~~~~l~ 55 (184)
+||+||.+.| ++....+.| +..|+++.++... +++ ..+|.||||||. +.. .+.
T Consensus 24 ~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~~V~~~~G~~i~~d~~l~~~~~~yD~liVPGG~~g~~--~l~ 101 (253)
T 3ewn_A 24 EQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLDPVTSDAGLAIVPTATFGTCPRDLTVLFAPGGTDGTL--AAA 101 (253)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSSCEECTTSCEECCSEETTTSCSSCSEEEECCBSHHHH--HHT
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCCeEEcCCCCEEeCCcCHHHcCCCCCEEEECCCccchh--hhc
Confidence 4899999998 344466788 4568888777411 122 246999999997 432 343
Q ss_pred hcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 56 EYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 56 ~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.+..+.++|+++.+++++|.+||.|..+|+++.
T Consensus 102 ~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~AG 134 (253)
T 3ewn_A 102 SDAETLAFMADRGARAKYITSVCSGSLILGAAG 134 (253)
T ss_dssp TCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHcCCEEEEEChHHHHHHHcC
Confidence 434578999999999999999999999999873
No 60
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=98.61 E-value=5.3e-08 Score=89.93 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=67.9
Q ss_pred CEEEEEecCCCH-----HHHHHHHHHCCCeEEEEcCC---------CC--CCCCCEEEEcCCchhH------HHHHHhcC
Q 030035 1 MVVGVLALQGSF-----NEHIAALKRLGVKGVEIRKP---------DQ--LQNVSSLIIPGGESTT------MARLAEYH 58 (184)
Q Consensus 1 m~IgVl~~qG~~-----~~~~~~L~~~G~~v~~v~~~---------~~--l~~~DglIipGG~~~~------~~~l~~~~ 58 (184)
+||+||+-.|++ ..+.++|++.|+++.++... ++ ..++|+||||||.... .+.|....
T Consensus 538 rKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g~GvD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~ 617 (688)
T 3ej6_A 538 LRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLASGVDQTYSAADATAFDAVVVAEGAERVFSGKGAMSPLFPAG 617 (688)
T ss_dssp CEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCTTCCEETTTCCGGGCSEEEECTTCCTTTSTTTTCCTTSCTT
T ss_pred CEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcccCcccCChhcCcEEEECCCcccccccccchhhhccCH
Confidence 489999988844 44678999999999998531 11 1369999999996421 12344444
Q ss_pred ChHHHHHHHHHcCCcEEEEchHHHHHHHhhh
Q 030035 59 NLFPALREFVKMGKPVWGTCAGLIFLANKAV 89 (184)
Q Consensus 59 ~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~ 89 (184)
...++++++.+.+|||.+||.|.++|..+-.
T Consensus 618 ~a~~fV~e~~~hgKpIAAIchgp~lL~~AGI 648 (688)
T 3ej6_A 618 RPSQILTDGYRWGKPVAAVGSAKKALQSIGV 648 (688)
T ss_dssp HHHHHHHHHHHTTCCEEEEGGGHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCEEEEeCccHHHHHHcCC
Confidence 5788999999999999999999999998753
No 61
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=98.58 E-value=7.2e-08 Score=76.38 Aligned_cols=84 Identities=20% Similarity=0.262 Sum_probs=61.9
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCC------CeEEEEcCC-----------------CC--CCCCCEEEEcCCchhHH
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLG------VKGVEIRKP-----------------DQ--LQNVSSLIIPGGESTTM 51 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G------~~v~~v~~~-----------------~~--l~~~DglIipGG~~~~~ 51 (184)
+||+||.+.| ++....+.|+..+ +++.++... ++ ..++|.||+|||.....
T Consensus 6 ~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~~v~~~~G~~i~~d~l~~~~~~~~D~livpGG~~~~~ 85 (202)
T 3gra_A 6 YRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGDRVLSDLGLELVATELSAAALKELDLLVVCGGLRTPL 85 (202)
T ss_dssp EEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSSEEEBTTSCEEECEECCSGGGTTCSEEEEECCTTCCS
T ss_pred EEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCceEcCCCCEEECCCcccccCCCCCEEEEeCCCchhh
Confidence 3799999998 3344567777654 666665311 22 35799999999964331
Q ss_pred HHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 52 ARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 52 ~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.. ..+.++|+++.+++++|.+||.|..+|+++.
T Consensus 86 ~~----~~l~~~l~~~~~~g~~iaaIC~G~~~La~aG 118 (202)
T 3gra_A 86 KY----PELDRLLNDCAAHGMALGGLWNGAWFLGRAG 118 (202)
T ss_dssp CC----TTHHHHHHHHHHHTCEEEEETTHHHHHHHHT
T ss_pred cc----HHHHHHHHHHHhhCCEEEEECHHHHHHHHcC
Confidence 11 3588999999999999999999999999873
No 62
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=98.58 E-value=3.5e-08 Score=91.80 Aligned_cols=86 Identities=23% Similarity=0.202 Sum_probs=67.1
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC------------------CCC--CCCCEEEEcCCchhHHHHHHh
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIRKP------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~------------------~~l--~~~DglIipGG~~~~~~~l~~ 56 (184)
+||+||...| .+....++|++.|+++.++... ++. .++|+|||||| +.. .|..
T Consensus 601 rKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG-g~~--~Lr~ 677 (753)
T 3ttv_A 601 RVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG-NIA--DIAD 677 (753)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSSEEECTTSCEEECCEETTTSCGGGCSEEEECCS-CGG--GTTT
T ss_pred CEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCCeEEeCCCCEEecccchhhCCCcCCCEEEECCC-ChH--Hhhh
Confidence 4899999888 4566789999999999887421 122 24899999999 433 3444
Q ss_pred cCChHHHHHHHHHcCCcEEEEchHHHHHHHhhh
Q 030035 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANKAV 89 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~ 89 (184)
...+.++|+++.+++|||.+||.|.++|+++..
T Consensus 678 d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa~AGL 710 (753)
T 3ttv_A 678 NGDANYYLMEAYKHLKPIALAGDARKFKATIKI 710 (753)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEGGGGGGGGGGTC
T ss_pred CHHHHHHHHHHHhcCCeEEEECchHHHHHHcCC
Confidence 345789999999999999999999999998854
No 63
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=98.55 E-value=1.1e-07 Score=75.96 Aligned_cols=86 Identities=19% Similarity=0.283 Sum_probs=64.7
Q ss_pred EEEEEec----------CC----CHHHHHHHHHHCCCeEEEEcCC-------------------------------CCC-
Q 030035 2 VVGVLAL----------QG----SFNEHIAALKRLGVKGVEIRKP-------------------------------DQL- 35 (184)
Q Consensus 2 ~IgVl~~----------qG----~~~~~~~~L~~~G~~v~~v~~~-------------------------------~~l- 35 (184)
||+||.. .| ++....+.|++.|+++.++... +++
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 86 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGEVPLDPRSINEKDPSWAEAEAALKHTARLSKDD 86 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCBCCCBCGGGSSSCCGGGHHHHHHTTSBEECCGGG
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCCccccCccccccHHHHHhhhhHhhcCCCChHHcC
Confidence 7999988 66 3444668899999998877411 111
Q ss_pred -CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 36 -QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 36 -~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.++|+||+|||.... ..+.....+.++|+++.+++++|.+||.|.++|+++.
T Consensus 87 ~~~~D~livpGG~~~~-~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~ag 139 (224)
T 1u9c_A 87 AHGFDAIFLPGGHGTM-FDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNAT 139 (224)
T ss_dssp GSSCSEEEECCCTTHH-HHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCB
T ss_pred hhhCCEEEECCCcchH-HHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHcc
Confidence 368999999997543 1233333578899999999999999999999999874
No 64
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.52 E-value=2.7e-07 Score=79.74 Aligned_cols=86 Identities=23% Similarity=0.328 Sum_probs=65.9
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC--------------------CCCC--CCCEEEEcCCchhHHHHH
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIRKP--------------------DQLQ--NVSSLIIPGGESTTMARL 54 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~--------------------~~l~--~~DglIipGG~~~~~~~l 54 (184)
+||+||.+.| ++....+.|++.|+++.++... ++++ ++|.||+|||.+.. .+
T Consensus 11 kkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g~~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~g~~--~l 88 (365)
T 3fse_A 11 KKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGMAPD--KM 88 (365)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSSCCEECTTSCCEECCSEETTTCCGGGCSEEEECCBTHHH--HH
T ss_pred eEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCCceeecCCCceEEeCCCCHhhCCCcCCCEEEEECCcchh--hc
Confidence 3799999998 3445678899999988776311 1222 58999999997432 34
Q ss_pred HhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 55 AEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 55 ~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.....+.++|+++.+++++|.+||.|..+|+++.
T Consensus 89 ~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~AG 122 (365)
T 3fse_A 89 RRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEGD 122 (365)
T ss_dssp TTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHcC
Confidence 4444578999999999999999999999999863
No 65
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=98.44 E-value=6.2e-07 Score=83.45 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=66.2
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCCCeEEEEcCC------------------CCC--CCCCEEEEcCCchhHHHHHHh
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLGVKGVEIRKP------------------DQL--QNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G~~v~~v~~~------------------~~l--~~~DglIipGG~~~~~~~l~~ 56 (184)
|||+||...| ++....+.|++.|+++.++... +++ .++|+||||||... ...+..
T Consensus 535 rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~-~~~l~~ 613 (715)
T 1sy7_A 535 RRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKA-AETLSK 613 (715)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHH-HHHHHT
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCCceecCCCceEecccccccCCcccCCEEEEcCCccc-Hhhhcc
Confidence 5899999988 3444668899999999887421 122 35899999999532 223444
Q ss_pred cCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 57 YHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
...+.++|+++.+++++|.+||.|..+|+++
T Consensus 614 ~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~A 644 (715)
T 1sy7_A 614 NGRALHWIREAFGHLKAIGATGEAVDLVAKA 644 (715)
T ss_dssp CHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCEEEEECHHHHHHHHc
Confidence 4457889999999999999999999999998
No 66
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=98.34 E-value=7.9e-07 Score=72.87 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=41.2
Q ss_pred CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 37 NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 37 ~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
++|+|+||||.+. +..+..+..+.++|+++.++++||.+||.|.++|+++
T Consensus 105 ~yD~l~ipGG~g~-~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a 154 (247)
T 3n7t_A 105 DYGLMFVCGGHGA-LYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGI 154 (247)
T ss_dssp GCSEEEECCSTTH-HHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGC
T ss_pred hCCEEEEeCCCch-hhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHh
Confidence 5899999999754 2234444457889999999999999999999999886
No 67
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=98.32 E-value=4.3e-07 Score=84.00 Aligned_cols=88 Identities=19% Similarity=0.208 Sum_probs=66.1
Q ss_pred CEEEEEec--CC----CHHHHHHHHHHCCCeEEEEcCC---------CC--CCCCCEEEEcCCchh--------------
Q 030035 1 MVVGVLAL--QG----SFNEHIAALKRLGVKGVEIRKP---------DQ--LQNVSSLIIPGGEST-------------- 49 (184)
Q Consensus 1 m~IgVl~~--qG----~~~~~~~~L~~~G~~v~~v~~~---------~~--l~~~DglIipGG~~~-------------- 49 (184)
+||+||+- .| .+..+.++|++.|++++++... ++ -.++|+||||||...
T Consensus 530 ~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g~~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~ 609 (688)
T 2iuf_A 530 LKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXANNVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSAG 609 (688)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCCTTCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCTT
T ss_pred CEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCCcccccchhcCCccccCeEEecCCCcccccccccccccccc
Confidence 48999987 55 3455778999999999998531 11 236999999999432
Q ss_pred -HHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 50 -TMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 50 -~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
..+.|.......++|+++.+.||||.+||.|.++|.++-
T Consensus 610 ~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~aG 649 (688)
T 2iuf_A 610 SGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESGQ 649 (688)
T ss_dssp SCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHTT
T ss_pred cchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHcC
Confidence 012344444578899999999999999999999998874
No 68
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=98.31 E-value=6.7e-07 Score=72.61 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=41.2
Q ss_pred CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 37 NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 37 ~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
++|+||+|||.... ..+..+..+.++|+++.++|++|.+||.|..+|+++.
T Consensus 98 ~~D~livpGG~~~~-~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag 148 (243)
T 1rw7_A 98 DYQIFFASAGHGTL-FDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLT 148 (243)
T ss_dssp GEEEEEECCSTTHH-HHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCB
T ss_pred hCcEEEECCCCCch-hhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcC
Confidence 68999999997542 2233334578899999999999999999999999874
No 69
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=98.20 E-value=8e-07 Score=72.32 Aligned_cols=83 Identities=17% Similarity=0.231 Sum_probs=57.2
Q ss_pred CEEEEEecCC----CHHHHHHHHHHCC--CeEEEEcCC-----------------CCCCCCCEEEEcCC-chhHHHHHHh
Q 030035 1 MVVGVLALQG----SFNEHIAALKRLG--VKGVEIRKP-----------------DQLQNVSSLIIPGG-ESTTMARLAE 56 (184)
Q Consensus 1 m~IgVl~~qG----~~~~~~~~L~~~G--~~v~~v~~~-----------------~~l~~~DglIipGG-~~~~~~~l~~ 56 (184)
+||+||.+.| ++....+.|++.+ +++.++.+. ++..++|.||+||| .+.. .+..
T Consensus 21 ~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs~~~~V~ss~G~~v~~d~~l~~~~~~D~liVPGG~~g~~--~l~~ 98 (236)
T 3bhn_A 21 YKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILGTKPEHHSQLGMTVKTDGHVSEVKEQDVVLITSGYRGIP--AALQ 98 (236)
T ss_dssp EEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEESSSEEEBTTCCEEECSEEGGGGGGCSEEEECCCTTHHH--HHHT
T ss_pred CEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEECCCcEEecCCcEEecCcccccccCCCEEEEcCCccCHh--hhcc
Confidence 3799999998 3444567787755 566655310 12357899999999 4432 2333
Q ss_pred cCChHHHHHHHHHcCC-cEEEEchHHHHHHHh
Q 030035 57 YHNLFPALREFVKMGK-PVWGTCAGLIFLANK 87 (184)
Q Consensus 57 ~~~l~~~l~~~~~~g~-PvlGIC~G~QlLa~~ 87 (184)
+..+.++| +.++++ +|.+||.|..+|+++
T Consensus 99 ~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~A 128 (236)
T 3bhn_A 99 DENFMSAL--KLDPSRQLIGSICAGSFVLHEL 128 (236)
T ss_dssp CHHHHHHC--CCCTTTCEEEEETTHHHHHHHT
T ss_pred CHHHHHHH--HhCCCCCEEEEEcHHHHHHHHc
Confidence 33466777 345566 999999999999987
No 70
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=98.16 E-value=1.2e-06 Score=73.45 Aligned_cols=104 Identities=14% Similarity=0.209 Sum_probs=74.6
Q ss_pred EEEEEecCC-C----HHHHHHHHHHCCC-eEEEEcC--C---------CCCCCCCEEEEcCCchhHHHHHHhcCChHHHH
Q 030035 2 VVGVLALQG-S----FNEHIAALKRLGV-KGVEIRK--P---------DQLQNVSSLIIPGGESTTMARLAEYHNLFPAL 64 (184)
Q Consensus 2 ~IgVl~~qG-~----~~~~~~~L~~~G~-~v~~v~~--~---------~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l 64 (184)
||.++-... + ...+.++++++|+ ++..+.. . +.|.++|+|+++||....+.++....++.+.|
T Consensus 58 ~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L 137 (291)
T 3en0_A 58 IIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRI 137 (291)
T ss_dssp EEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHH
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHH
Confidence 677774432 3 2335678888999 5665532 1 12568999999999877766666667899999
Q ss_pred HHHHHcC-CcEEEEchHHHHHHHhhhccc----CC------CccccCcceee
Q 030035 65 REFVKMG-KPVWGTCAGLIFLANKAVGQK----LG------GQELVGGLDCT 105 (184)
Q Consensus 65 ~~~~~~g-~PvlGIC~G~QlLa~~~~~~~----~~------~~~~LG~ldv~ 105 (184)
++++++| .|+.|+|+|+.++++.+.... .. ..++||+++..
T Consensus 138 ~~~~~~G~~~~~GtSAGA~i~~~~m~~~g~s~~~p~~~~v~~~~GLGll~~~ 189 (291)
T 3en0_A 138 RQRVHNGEISLAGTSAGAAVMGHHMIAGGSSGEWPNRALVDMAVGLGIVPEI 189 (291)
T ss_dssp HHHHHTTSSEEEEETHHHHTTSSEEEEEECCSSCCCGGGEEEEECCCSSTTE
T ss_pred HHHHHCCCeEEEEeCHHHHhhhHheEcCCCCccCcccCceeecCcccccCCC
Confidence 9999999 999999999999998653210 01 23578988865
No 71
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=98.14 E-value=2.1e-06 Score=71.80 Aligned_cols=53 Identities=21% Similarity=0.325 Sum_probs=41.1
Q ss_pred CCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHhh
Q 030035 35 LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKA 88 (184)
Q Consensus 35 l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~ 88 (184)
.+++|+||||||.+... .+..+..+.++|+++.+++++|.+||.|..+|+.+.
T Consensus 143 ~~~yD~livPGG~g~~~-~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~ 195 (291)
T 1n57_A 143 DSEYAAIFVPGGHGALI-GLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALR 195 (291)
T ss_dssp TCSEEEEEECCSGGGGS-SGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGT
T ss_pred cccCCEEEecCCcchhh-hhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhc
Confidence 35789999999965321 233333478899999999999999999999888764
No 72
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=98.14 E-value=2.2e-06 Score=70.08 Aligned_cols=50 Identities=12% Similarity=0.209 Sum_probs=41.2
Q ss_pred CCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHHHHHHHh
Q 030035 37 NVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANK 87 (184)
Q Consensus 37 ~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~QlLa~~ 87 (184)
++|+|++|||.+.. ..+..+..+.++|+++.++++||.+||.|..+|+++
T Consensus 98 ~yD~l~vpGG~~~~-~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a 147 (244)
T 3kkl_A 98 DYKVFFASAGHGAL-FDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGL 147 (244)
T ss_dssp GCSEEEECCSTTHH-HHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hCCEEEEcCCCchh-hhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 58999999997542 234444457889999999999999999999999876
No 73
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=95.47 E-value=0.052 Score=44.01 Aligned_cols=73 Identities=21% Similarity=0.267 Sum_probs=51.3
Q ss_pred ecCCCHHHHHHHHHHCCCeEEEE-------cCC---CCCCCCCEEEEcCCchhHHH----HHHh---cCChHHHHHHHHH
Q 030035 7 ALQGSFNEHIAALKRLGVKGVEI-------RKP---DQLQNVSSLIIPGGESTTMA----RLAE---YHNLFPALREFVK 69 (184)
Q Consensus 7 ~~qG~~~~~~~~L~~~G~~v~~v-------~~~---~~l~~~DglIipGG~~~~~~----~l~~---~~~l~~~l~~~~~ 69 (184)
.+.+....+.++|+..+++++.+ ..+ ++|+++|.||+.+-..+... ...+ .....+.|+++++
T Consensus 37 ~~~~~~~~l~~aL~~~~~~v~~~~~~~~~~~fp~~~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~ 116 (256)
T 2gk3_A 37 KYEEGATWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVK 116 (256)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECHHHHHHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHH
T ss_pred CccccHHHHHHHHHhcCceEEEEecccchhhCCcChhHHhcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHH
Confidence 35566677889999999999988 223 34678999999984333211 1110 0246789999999
Q ss_pred cCCcEEEEchH
Q 030035 70 MGKPVWGTCAG 80 (184)
Q Consensus 70 ~g~PvlGIC~G 80 (184)
+|..+++| .|
T Consensus 117 ~GGgll~i-gG 126 (256)
T 2gk3_A 117 NGGGLLMI-GG 126 (256)
T ss_dssp TTCEEEEE-CS
T ss_pred hCCEEEEE-CC
Confidence 99999999 44
No 74
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.25 E-value=0.023 Score=47.06 Aligned_cols=70 Identities=24% Similarity=0.398 Sum_probs=50.5
Q ss_pred CEEEEEecCCC-HHHHHHHHHHCCCeEEEEcC-CCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 1 MVVGVLALQGS-FNEHIAALKRLGVKGVEIRK-PDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 1 m~IgVl~~qG~-~~~~~~~L~~~G~~v~~v~~-~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
|||+|+.-... ..++.+.|++.|+++..... .+.+.++|.+|.-||-++... ..+.+... +|++||=
T Consensus 30 mki~iv~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlGGDGT~L~----------aa~~~~~~-~PilGIN 98 (278)
T 1z0s_A 30 MRAAVVYKTDGHVKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTILR----------ILQKLKRC-PPIFGIN 98 (278)
T ss_dssp CEEEEEESSSTTHHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEECHHHHHH----------HHTTCSSC-CCEEEEE
T ss_pred eEEEEEeCCcHHHHHHHHHHHHCCCEEEEccccccccCCCCEEEEECCCHHHHH----------HHHHhCCC-CcEEEEC
Confidence 89999877554 56678889999999887653 233568999999999877532 22333234 8999997
Q ss_pred hHH
Q 030035 79 AGL 81 (184)
Q Consensus 79 ~G~ 81 (184)
.|.
T Consensus 99 ~G~ 101 (278)
T 1z0s_A 99 TGR 101 (278)
T ss_dssp CSS
T ss_pred CCC
Confidence 763
No 75
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=91.64 E-value=0.29 Score=39.82 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=41.7
Q ss_pred CEEEEEecCCC-----HHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHc--CCc
Q 030035 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKM--GKP 73 (184)
Q Consensus 1 m~IgVl~~qG~-----~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~--g~P 73 (184)
|||+++.-... ..++.+.|++.|+++ +.+++|.+|.-||-+|.. ...+.+... ++|
T Consensus 1 mki~ii~n~~~~~~~~~~~l~~~l~~~g~~v-------~~~~~D~vv~lGGDGT~l----------~aa~~~~~~~~~~P 63 (272)
T 2i2c_A 1 MKYMITSKGDEKSDLLRLNMIAGFGEYDMEY-------DDVEPEIVISIGGDGTFL----------SAFHQYEERLDEIA 63 (272)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTSSCEE-------CSSSCSEEEEEESHHHHH----------HHHHHTGGGTTTCE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEe-------CCCCCCEEEEEcCcHHHH----------HHHHHHhhcCCCCC
Confidence 89999876321 122445577788877 235789999999988753 223333333 799
Q ss_pred EEEEchH
Q 030035 74 VWGTCAG 80 (184)
Q Consensus 74 vlGIC~G 80 (184)
++||=.|
T Consensus 64 ilGIn~G 70 (272)
T 2i2c_A 64 FIGIHTG 70 (272)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 9999665
No 76
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=91.09 E-value=1.2 Score=36.54 Aligned_cols=61 Identities=15% Similarity=0.052 Sum_probs=42.1
Q ss_pred HHHHHHHCC-CeEEEEcCC----------CCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchHH
Q 030035 15 HIAALKRLG-VKGVEIRKP----------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAGL 81 (184)
Q Consensus 15 ~~~~L~~~G-~~v~~v~~~----------~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~ 81 (184)
+.+.|++.| +++.+..++ ++|+++|.||+--... . +.. ...+.|++++++|.+++|+..+.
T Consensus 25 l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~~~~-~---l~~--~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 25 LKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDYNGD-S---WPE--ETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp HHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECCCSS-C---CCH--HHHHHHHHHHHTTCEEEEEGGGG
T ss_pred HHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeCCCC-c---CCH--HHHHHHHHHHHcCCCEEEEeccc
Confidence 345677778 888888653 3588999999743211 1 111 14567889999999999999764
No 77
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=89.15 E-value=1.2 Score=36.71 Aligned_cols=69 Identities=16% Similarity=0.131 Sum_probs=43.3
Q ss_pred EEEEEecCCC------HHHHHHHHHHCCCeEEEEcCC-C---------------------------CCCCCCEEEEcCCc
Q 030035 2 VVGVLALQGS------FNEHIAALKRLGVKGVEIRKP-D---------------------------QLQNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~qG~------~~~~~~~L~~~G~~v~~v~~~-~---------------------------~l~~~DglIipGG~ 47 (184)
||+|+.-.+. ..++.+.|++.|+++.+.... + ..+++|.+|.-||-
T Consensus 6 ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~~GGD 85 (307)
T 1u0t_A 6 SVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGGD 85 (307)
T ss_dssp EEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEECH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccccCCCEEEEEeCC
Confidence 7998876543 345667788899987654211 0 12357999999998
Q ss_pred hhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 48 STTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 48 ~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
+|.. ...+.+...++|++||=.|
T Consensus 86 GT~l----------~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 86 GTFL----------RAAELARNASIPVLGVNLG 108 (307)
T ss_dssp HHHH----------HHHHHHHHHTCCEEEEECS
T ss_pred HHHH----------HHHHHhccCCCCEEEEeCC
Confidence 7753 2233333457899999655
No 78
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=88.45 E-value=1.3 Score=40.61 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=47.0
Q ss_pred HHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 13 NEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 13 ~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
..+.++|.+.|+.+.++...++|.+++.||+|.-.... ..+.+.|++++++|.-++..+
T Consensus 428 ~~~y~aL~~~gi~vD~v~~~~dL~~Yklvv~P~~~~~~-------~~~~~~L~~yV~~GG~lv~t~ 486 (675)
T 3tty_A 428 HKYYDALYKQNIQTDMISVEEDLSKYKVVIAPVMYMVK-------PGFAERVERFVAQGGTFVTTF 486 (675)
T ss_dssp HHHHHHHHTTTCCEEEECTTSCCTTCSEEEETTCCBCC-------TTHHHHHHHHHHTTCEEEEET
T ss_pred HHHHHHHHHcCceEEEecCcCCcccCCEEEEeccEecC-------HHHHHHHHHHHhcCCEEEEEc
Confidence 44678899999999999988899999999999864322 246778999999887666665
No 79
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=88.40 E-value=0.34 Score=39.48 Aligned_cols=69 Identities=16% Similarity=0.256 Sum_probs=44.1
Q ss_pred EEEEEecCCC------HHHHHHHHHHCCCeEEEEcCC----C----------CC-CCCCEEEEcCCchhHHHHHHhcCCh
Q 030035 2 VVGVLALQGS------FNEHIAALKRLGVKGVEIRKP----D----------QL-QNVSSLIIPGGESTTMARLAEYHNL 60 (184)
Q Consensus 2 ~IgVl~~qG~------~~~~~~~L~~~G~~v~~v~~~----~----------~l-~~~DglIipGG~~~~~~~l~~~~~l 60 (184)
||+++.-.++ ..++.+.|++.|+++.+..+. . .+ .++|.+|.-||-+|..
T Consensus 7 ki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GGDGT~l--------- 77 (292)
T 2an1_A 7 CIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNML--------- 77 (292)
T ss_dssp EEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCHHHHH---------
T ss_pred EEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhcccccccccchhhcccCCCEEEEEcCcHHHH---------
Confidence 6888876432 344667888999998765311 0 01 2579999999988752
Q ss_pred HHHHHHHHHcCCcEEEEchH
Q 030035 61 FPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 61 ~~~l~~~~~~g~PvlGIC~G 80 (184)
+.++.+...+.|++||=.|
T Consensus 78 -~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 78 -GAARTLARYDINVIGINRG 96 (292)
T ss_dssp -HHHHHHTTSSCEEEEBCSS
T ss_pred -HHHHHhhcCCCCEEEEECC
Confidence 3344444457899999655
No 80
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=88.11 E-value=1.3 Score=31.53 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=38.4
Q ss_pred HHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 14 EHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 14 ~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
.+.+.|.+.|++..- +.++.+|.+|+.-|..+..... ....|+.+.+.|+|++||=
T Consensus 19 ~L~~~l~~~~f~~~~----~~I~~~~~vIvL~G~~t~~s~w-----v~~EI~~A~~~gkpIigV~ 74 (111)
T 1eiw_A 19 VFLERLEQSGLEWRP----ATPEDADAVIVLAGLWGTRRDE-----ILGAVDLARKSSKPIITVR 74 (111)
T ss_dssp HHHHHHHHHCSCEEE----CCSSSCSEEEEEGGGTTTSHHH-----HHHHHHHHTTTTCCEEEEC
T ss_pred HHHHHHhCCCCeeec----CccccCCEEEEEeCCCcCCChH-----HHHHHHHHHHcCCCEEEEE
Confidence 344555555777665 7789999999877765543321 2345777778899999983
No 81
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=86.58 E-value=0.96 Score=36.48 Aligned_cols=60 Identities=15% Similarity=0.201 Sum_probs=41.6
Q ss_pred HHHHHHCCCeEEEEc--CC------CCCCCCCEEEEcCC-chhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 16 IAALKRLGVKGVEIR--KP------DQLQNVSSLIIPGG-ESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 16 ~~~L~~~G~~v~~v~--~~------~~l~~~DglIipGG-~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
.+.|++.|+++..+. ++ +.|+++|.||+-|. .... +.+ ...+.|++++++|+.++|+=.|
T Consensus 38 ~~~L~~~gf~V~~~t~dd~~~~~~~~~L~~~DvvV~~~~~~~~~---l~~--~~~~al~~~V~~GgG~vgiH~a 106 (252)
T 1t0b_A 38 ASYLAEAGFDAATAVLDEPEHGLTDEVLDRCDVLVWWGHIAHDE---VKD--EVVERVHRRVLEGMGLIVLHSG 106 (252)
T ss_dssp HHHHHHTTCEEEEEESSSGGGGCCHHHHHTCSEEEEECSSCGGG---SCH--HHHHHHHHHHHTTCEEEEEGGG
T ss_pred HHHHhhCCcEEEEEeccCccccCCHhHHhcCCEEEEecCCCCCc---CCH--HHHHHHHHHHHcCCCEEEEccc
Confidence 567888999998865 33 22679999999542 1111 111 2467789999999999999666
No 82
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=86.57 E-value=0.81 Score=42.39 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=54.4
Q ss_pred EEEEEecCCCHH--------------------HHHHHHHHCCCeEEEEcC-----CCCCCCCCEEEEcCCchhHH----H
Q 030035 2 VVGVLALQGSFN--------------------EHIAALKRLGVKGVEIRK-----PDQLQNVSSLIIPGGESTTM----A 52 (184)
Q Consensus 2 ~IgVl~~qG~~~--------------------~~~~~L~~~G~~v~~v~~-----~~~l~~~DglIipGG~~~~~----~ 52 (184)
|||||.-+|+.. -+.++|..+++++..++. .+.|+++|.||.+|-..+.+ -
T Consensus 440 kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdDI~e~e~L~d~DVIIn~G~A~TalSgg~~ 519 (759)
T 2zuv_A 440 NVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGPVDTAFTGGDV 519 (759)
T ss_dssp EEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHHHHHHCCCTTCCEEEEEECTTSTTTCGGG
T ss_pred eEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHHhccccccccCCEEEecCcchhcccCccc
Confidence 799998777432 156889999999999862 15588999999999322211 0
Q ss_pred HHHhcCChHHHHHHHHHcCCcEEEEch
Q 030035 53 RLAEYHNLFPALREFVKMGKPVWGTCA 79 (184)
Q Consensus 53 ~l~~~~~l~~~l~~~~~~g~PvlGIC~ 79 (184)
... ....+.||+++.+|.-++||..
T Consensus 520 W~~--p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 520 WTN--PKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp GGC--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cCC--HHHHHHHHHHHHcCCcEEEeCC
Confidence 111 1367899999999998888863
No 83
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=82.72 E-value=8 Score=30.01 Aligned_cols=46 Identities=22% Similarity=0.379 Sum_probs=32.0
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcCC-----------CC-C-CCCCEEEEcCCc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKP-----------DQ-L-QNVSSLIIPGGE 47 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~-----------~~-l-~~~DglIipGG~ 47 (184)
|||||+.+ |.... +.+.|.+.|++++.+.+. ++ + .++|.+++.=+.
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~~ 60 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQ 60 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSCH
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCCH
Confidence 89999987 88765 667777888887544221 11 3 478999987553
No 84
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=79.09 E-value=1.1 Score=35.94 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=38.2
Q ss_pred CEEEEEec--CCC-HHHHHHHHHHC--CCeEEEEcCCCC-CCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcE
Q 030035 1 MVVGVLAL--QGS-FNEHIAALKRL--GVKGVEIRKPDQ-LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 1 m~IgVl~~--qG~-~~~~~~~L~~~--G~~v~~v~~~~~-l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~Pv 74 (184)
|||+++.- .|. ..+..+.+.+. |.++.. .+ +. -.++|.+|.-||-+|.. +..+.+.. ++|+
T Consensus 1 mki~ii~Np~~~~~~~~~~~~i~~~l~~~~~~~-~~-~~~~~~~D~vv~~GGDGTll----------~~a~~~~~-~~Pi 67 (258)
T 1yt5_A 1 MKIAILYREEREKEGEFLKEKISKEHEVIEFGE-AN-APGRVTADLIVVVGGDGTVL----------KAAKKAAD-GTPM 67 (258)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHTTTSEEEEEEE-SS-SCSCBCCSEEEEEECHHHHH----------HHHTTBCT-TCEE
T ss_pred CEEEEEEeCCCchHHHHHHHHHHHHhcCCceec-cc-ccccCCCCEEEEEeCcHHHH----------HHHHHhCC-CCCE
Confidence 89999873 333 33333333322 334331 11 22 24789999999988753 22333333 7899
Q ss_pred EEEchH
Q 030035 75 WGTCAG 80 (184)
Q Consensus 75 lGIC~G 80 (184)
+||=.|
T Consensus 68 lGIn~G 73 (258)
T 1yt5_A 68 VGFKAG 73 (258)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999766
No 85
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=78.27 E-value=7.8 Score=33.04 Aligned_cols=70 Identities=21% Similarity=0.185 Sum_probs=47.3
Q ss_pred EEEEEecCCC------HHHHHHHHHHCCCeEEEEc--------------------------CCCCC-CCCCEEEEcCCch
Q 030035 2 VVGVLALQGS------FNEHIAALKRLGVKGVEIR--------------------------KPDQL-QNVSSLIIPGGES 48 (184)
Q Consensus 2 ~IgVl~~qG~------~~~~~~~L~~~G~~v~~v~--------------------------~~~~l-~~~DglIipGG~~ 48 (184)
+|+|+.-.++ +.++.+.|.+.|+++.+-+ ..+++ +++|.+|.-||-+
T Consensus 40 ~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~lGGDG 119 (365)
T 3pfn_A 40 SVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDG 119 (365)
T ss_dssp EEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEEESSTT
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcccCCCEEEEEcChH
Confidence 6888876654 4667788888898875421 11223 4789999999988
Q ss_pred hHHHHHHhcCChHHHHHHHHHcCCcEEEEchHH
Q 030035 49 TTMARLAEYHNLFPALREFVKMGKPVWGTCAGL 81 (184)
Q Consensus 49 ~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G~ 81 (184)
+.+. ..+.+...+.||+||=.|.
T Consensus 120 T~L~----------aa~~~~~~~~PvlGiN~G~ 142 (365)
T 3pfn_A 120 TLLY----------ASSLFQGSVPPVMAFHLGS 142 (365)
T ss_dssp HHHH----------HHHHCSSSCCCEEEEESSS
T ss_pred HHHH----------HHHHhccCCCCEEEEcCCC
Confidence 7532 2333334578999998773
No 86
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=76.58 E-value=19 Score=27.87 Aligned_cols=67 Identities=24% Similarity=0.415 Sum_probs=40.2
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+||++.-.- + | .+ +.+.+++.|+++.+.....+ + .++|+||+.+..... ..+
T Consensus 7 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~---------~~~ 77 (291)
T 3l49_A 7 TIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDV---------LNP 77 (291)
T ss_dssp EEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHH---------HHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhh---------hHH
Confidence 688876432 2 2 22 34567778999988754322 1 379999997654322 123
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++++.+.++|+.-+
T Consensus 78 ~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 78 WLQKINDAGIPLFTV 92 (291)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCcEEEe
Confidence 345555678888765
No 87
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=75.19 E-value=4.6 Score=30.75 Aligned_cols=48 Identities=17% Similarity=0.108 Sum_probs=31.9
Q ss_pred CEEEEEec-----CCC-----HHHHHHHHHHCCCeEEEE---cCC-CC--------CCCCCEEEEcCCch
Q 030035 1 MVVGVLAL-----QGS-----FNEHIAALKRLGVKGVEI---RKP-DQ--------LQNVSSLIIPGGES 48 (184)
Q Consensus 1 m~IgVl~~-----qG~-----~~~~~~~L~~~G~~v~~v---~~~-~~--------l~~~DglIipGG~~ 48 (184)
||++||+. .|. -.-+.+.|++.|+++... .+. +. ++++|.||.+||.+
T Consensus 4 ~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g 73 (172)
T 3kbq_A 4 KNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLG 73 (172)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCS
T ss_pred CEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCc
Confidence 68999874 342 233557899999987654 332 11 23689999999854
No 88
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=74.63 E-value=3.4 Score=33.51 Aligned_cols=60 Identities=12% Similarity=0.015 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCeEEEEcCC------CCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEE
Q 030035 13 NEHIAALKRLGVKGVEIRKP------DQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 13 ~~~~~~L~~~G~~v~~v~~~------~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGI 77 (184)
..+.++|++.|++|..+... ++|.++|.||++--.... +.. ...+.|++++++|.=++.+
T Consensus 20 ~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~d~~~~~---l~~--~~~~~L~~yV~~GGgLi~~ 85 (259)
T 3rht_A 20 GYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILSDYPAER---MTA--QAIDQLVTMVKAGCGLVML 85 (259)
T ss_dssp HHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEESCCGGG---BCH--HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEcCCcccc---CCH--HHHHHHHHHHHhCCeEEEe
Confidence 33667899999999988632 346799999998422211 111 2467899999888766655
No 89
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=74.18 E-value=23 Score=27.30 Aligned_cols=67 Identities=19% Similarity=0.278 Sum_probs=40.4
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-.- + | .+ +.+++++.|+++.+.....+ + .++||||+.+..... ..+
T Consensus 10 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~---------~~~ 80 (293)
T 3l6u_A 10 IVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVY---------IGS 80 (293)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTT---------THH
T ss_pred EEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHH---------HHH
Confidence 688876432 2 2 22 34567778999888754321 1 479999997653322 223
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++++.+.++|+.-+
T Consensus 81 ~~~~~~~~~iPvV~~ 95 (293)
T 3l6u_A 81 AIEEAKKAGIPVFAI 95 (293)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 455555668888765
No 90
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=72.69 E-value=14 Score=27.94 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=30.9
Q ss_pred CEEEEEecC----------CCH-----HHHHHHHHHCCCeEEEE---cCC-CC--------CCC--CCEEEEcCCch
Q 030035 1 MVVGVLALQ----------GSF-----NEHIAALKRLGVKGVEI---RKP-DQ--------LQN--VSSLIIPGGES 48 (184)
Q Consensus 1 m~IgVl~~q----------G~~-----~~~~~~L~~~G~~v~~v---~~~-~~--------l~~--~DglIipGG~~ 48 (184)
+||+|+... |.. .-+...|++.|+++... .+. +. +++ +|.||.+||.+
T Consensus 16 ~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 478888753 522 22457889999987643 332 11 234 89999999854
No 91
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=72.39 E-value=19 Score=29.41 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=45.9
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcC----------------------CCCC--CCCCEEEEcCCchhH---HH
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK----------------------PDQL--QNVSSLIIPGGESTT---MA 52 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~----------------------~~~l--~~~DglIipGG~~~~---~~ 52 (184)
|||.|+.+-|.-.+ ..+.|.+.|++|...+. ++++ .++|.+|++-|-+.. +.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHHH
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHHH
Confidence 47888888776665 67788888888776632 1223 368989886553221 22
Q ss_pred HHHhcCC-----hHHHHHHHHHcCCcEEEEch
Q 030035 53 RLAEYHN-----LFPALREFVKMGKPVWGTCA 79 (184)
Q Consensus 53 ~l~~~~~-----l~~~l~~~~~~g~PvlGIC~ 79 (184)
...+ .+ -.+++.++...++|++||..
T Consensus 85 ~a~~-~gi~v~~~~e~~~~~~~~~~~~IaVTG 115 (326)
T 3eag_A 85 AILN-LGLPYISGPQWLSENVLHHHWVLGVAG 115 (326)
T ss_dssp HHHH-TTCCEEEHHHHHHHHTGGGSEEEEEES
T ss_pred HHHH-cCCcEEeHHHHHHHHHhcCCCEEEEEC
Confidence 2222 12 13444443334678888874
No 92
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=71.86 E-value=23 Score=26.90 Aligned_cols=71 Identities=14% Similarity=0.088 Sum_probs=46.6
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcC-CCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK-PDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~-~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
|||+|+. -|+... +...|.+.|.++..+.. ++.+.++|.+|+.=. +..... +.+.+..... +..++-++
T Consensus 20 ~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~aD~vi~av~-~~~~~~------v~~~l~~~~~-~~~vi~~~ 90 (209)
T 2raf_A 20 MEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQATTLGEIVIMAVP-YPALAA------LAKQYATQLK-GKIVVDIT 90 (209)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCCCSSCCSEEEECSC-HHHHHH------HHHHTHHHHT-TSEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHhccCCEEEEcCC-cHHHHH------HHHHHHHhcC-CCEEEEEC
Confidence 6899987 588877 45788899999887753 335678999988543 222222 2334444555 67676666
Q ss_pred hH
Q 030035 79 AG 80 (184)
Q Consensus 79 ~G 80 (184)
.|
T Consensus 91 ~g 92 (209)
T 2raf_A 91 NP 92 (209)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 93
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=70.82 E-value=16 Score=31.90 Aligned_cols=77 Identities=12% Similarity=0.087 Sum_probs=47.3
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcC---------------------CCCCCCCCEEEEcCCchhH---HHHHH
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK---------------------PDQLQNVSSLIIPGGESTT---MARLA 55 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~---------------------~~~l~~~DglIipGG~~~~---~~~l~ 55 (184)
+||.|+.+-|.-.+ ..+.|.+.|++|..... ++.+.++|.+|++-|-+.. +....
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a~ 102 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAAR 102 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHHH
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHHH
Confidence 36888888877665 78889999988876642 1235678999996653221 22222
Q ss_pred hcCC-----hHHHHHHHHHcCCcEEEEch
Q 030035 56 EYHN-----LFPALREFVKMGKPVWGTCA 79 (184)
Q Consensus 56 ~~~~-----l~~~l~~~~~~g~PvlGIC~ 79 (184)
+ .+ -.+++.++. ..+|++||..
T Consensus 103 ~-~gi~v~~~~e~l~~~~-~~~~~IaVTG 129 (494)
T 4hv4_A 103 E-ARIPVIRRAEMLAELM-RYRHGIAVAG 129 (494)
T ss_dssp H-TTCCEEEHHHHHHHHH-TTSEEEEEEC
T ss_pred H-CCCCEEcHHHHHHHHh-cCCCEEEEec
Confidence 2 12 134555544 3568888874
No 94
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=70.21 E-value=25 Score=27.65 Aligned_cols=67 Identities=16% Similarity=0.142 Sum_probs=39.5
Q ss_pred EEEEEecC--CCH-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ--GSF-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q--G~~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-. ..| .+ +.+++++.|+++.+.....+ + .++||||+.+..... +.+
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---------~~~ 74 (313)
T 3m9w_A 4 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQV---------LSN 74 (313)
T ss_dssp EEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTS---------CHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhh---------hHH
Confidence 68887642 222 22 34567778999888754321 1 479999998754322 123
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++++.+.|+|+.-+
T Consensus 75 ~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 75 VVKEAKQEGIKVLAY 89 (313)
T ss_dssp HHHHHHTTTCEEEEE
T ss_pred HHHHHHHCCCeEEEE
Confidence 444455567777544
No 95
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=68.47 E-value=0.33 Score=36.75 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=26.4
Q ss_pred CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEch
Q 030035 36 QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (184)
Q Consensus 36 ~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~ 79 (184)
.+.|.+||-||-.+.-..... .+..+.|.+..+.++.+.|||.
T Consensus 83 ~~~D~vVllGGLAMPk~~v~~-e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 83 GNVDVLVLLGGLSMPGIGSDI-EDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp CCEEEEEEEGGGGSTTTSCCH-HHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEeccccCCCCCCCH-HHHHHHHHHhhcCCCCEEEEEh
Confidence 588999999995332100000 0234556666555678999997
No 96
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=68.32 E-value=38 Score=27.37 Aligned_cols=29 Identities=24% Similarity=0.298 Sum_probs=22.4
Q ss_pred CEEEEEecCCCH-HHHHHHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSF-NEHIAALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~-~~~~~~L~~~G~~v~~v 29 (184)
|||||+...|.. ..|.+++++.+.+++-+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav 33 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVAS 33 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEE
Confidence 589999887754 45888999888877655
No 97
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=67.17 E-value=31 Score=26.79 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=39.1
Q ss_pred EEEEEecCC--CH-HH----HHHHHHHCCCeEEEE-cCCCC-------C-----CCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 2 VVGVLALQG--SF-NE----HIAALKRLGVKGVEI-RKPDQ-------L-----QNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 2 ~IgVl~~qG--~~-~~----~~~~L~~~G~~v~~v-~~~~~-------l-----~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
||+++.-.. .| .+ +.+.+++.|+++.+. ....+ + .++||||+.+..... ..
T Consensus 6 ~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---------~~ 76 (305)
T 3g1w_A 6 TYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVE---------LT 76 (305)
T ss_dssp EEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTT---------TH
T ss_pred eEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHH---------HH
Confidence 688876433 22 22 335567789999884 32211 1 369999998754322 22
Q ss_pred HHHHHHHHcCCcEEEE
Q 030035 62 PALREFVKMGKPVWGT 77 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGI 77 (184)
+.++++.+.++|+.-+
T Consensus 77 ~~~~~~~~~~iPvV~~ 92 (305)
T 3g1w_A 77 DTINKAVDAGIPIVLF 92 (305)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCcEEEE
Confidence 3455555668887654
No 98
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=66.50 E-value=41 Score=27.30 Aligned_cols=29 Identities=21% Similarity=0.238 Sum_probs=22.3
Q ss_pred CEEEEEecCCCH-HHHHHHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSF-NEHIAALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~-~~~~~~L~~~G~~v~~v 29 (184)
|||||+...|.. ..|.+++++.+.+++-+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav 33 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSA 33 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEE
Confidence 589999886754 45888998888877655
No 99
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=65.46 E-value=36 Score=26.47 Aligned_cols=67 Identities=15% Similarity=0.137 Sum_probs=40.0
Q ss_pred EEEEEecCC-C--HHH----HHHHHHHCCCeEEEEcCC--CC-------C-----CCCCEEEEcCCchhHHHHHHhcCCh
Q 030035 2 VVGVLALQG-S--FNE----HIAALKRLGVKGVEIRKP--DQ-------L-----QNVSSLIIPGGESTTMARLAEYHNL 60 (184)
Q Consensus 2 ~IgVl~~qG-~--~~~----~~~~L~~~G~~v~~v~~~--~~-------l-----~~~DglIipGG~~~~~~~l~~~~~l 60 (184)
+||++.-.- + +.+ +.+++++.|+++.+.... .+ + .++||||+.+..... .
T Consensus 5 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~---------~ 75 (297)
T 3rot_A 5 KYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTA---------F 75 (297)
T ss_dssp EEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSST---------T
T ss_pred EEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH---------H
Confidence 688876432 1 222 335567789999887633 11 1 479999997654332 2
Q ss_pred HHHHHHHHHcCCcEEEE
Q 030035 61 FPALREFVKMGKPVWGT 77 (184)
Q Consensus 61 ~~~l~~~~~~g~PvlGI 77 (184)
.+.++++.+.|+|+.-+
T Consensus 76 ~~~~~~~~~~giPvV~~ 92 (297)
T 3rot_A 76 SKSLQRANKLNIPVIAV 92 (297)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 23344555568888765
No 100
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=65.40 E-value=42 Score=25.40 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=39.1
Q ss_pred EEEEEecC--CCHH-H----HHHHHHHCCCeEEEEcC--CCC-------C-----CC-CCEEEEcCCchhHHHHHHhcCC
Q 030035 2 VVGVLALQ--GSFN-E----HIAALKRLGVKGVEIRK--PDQ-------L-----QN-VSSLIIPGGESTTMARLAEYHN 59 (184)
Q Consensus 2 ~IgVl~~q--G~~~-~----~~~~L~~~G~~v~~v~~--~~~-------l-----~~-~DglIipGG~~~~~~~l~~~~~ 59 (184)
|||++.-. ..|. + +.+++++.|+++.+... ..+ + .+ +||||+.+.....
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~--------- 72 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAED--------- 72 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTT---------
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHH---------
Confidence 78887632 2222 2 34556778999888752 121 1 25 9999998743221
Q ss_pred hHHHHHHHHHcCCcEEEE
Q 030035 60 LFPALREFVKMGKPVWGT 77 (184)
Q Consensus 60 l~~~l~~~~~~g~PvlGI 77 (184)
..+.++++.+.++|+.-+
T Consensus 73 ~~~~~~~~~~~~ipvV~~ 90 (276)
T 3ksm_A 73 LTPSVAQYRARNIPVLVV 90 (276)
T ss_dssp THHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 123444555668888655
No 101
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=64.05 E-value=45 Score=26.19 Aligned_cols=67 Identities=22% Similarity=0.221 Sum_probs=39.6
Q ss_pred EEEEEecC--CCH-HH----HHHHHHHCCCeEEEEcCCCC-------C-----CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ--GSF-NE----HIAALKRLGVKGVEIRKPDQ-------L-----QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q--G~~-~~----~~~~L~~~G~~v~~v~~~~~-------l-----~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-. ..| .+ +.+.+++.|+++.+.....+ + .++||||+.+..... ..+
T Consensus 5 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~---------~~~ 75 (330)
T 3uug_A 5 SVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTT---------LSD 75 (330)
T ss_dssp EEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGG---------GHH
T ss_pred EEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchh---------HHH
Confidence 68887632 223 22 33557778999887753321 1 368999998754322 223
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++++.+.|+|+.-+
T Consensus 76 ~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 76 VLKQAGEQGIKVIAY 90 (330)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 445555667887654
No 102
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=63.64 E-value=11 Score=28.11 Aligned_cols=35 Identities=20% Similarity=0.173 Sum_probs=24.3
Q ss_pred HHHHHHHCCCeEEEE---cCC-C----------CCCCCCEEEEcCCchh
Q 030035 15 HIAALKRLGVKGVEI---RKP-D----------QLQNVSSLIIPGGEST 49 (184)
Q Consensus 15 ~~~~L~~~G~~v~~v---~~~-~----------~l~~~DglIipGG~~~ 49 (184)
+.+.|++.|+++... .+. + ...++|.||.+||-+.
T Consensus 45 L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 45 IKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred HHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 557899999987643 332 1 1246899999998643
No 103
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=62.80 E-value=35 Score=23.61 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=41.8
Q ss_pred CEEEEEecCCCHHH-----HHHHHHHCCCeEEEEc--C---CCCCCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHH-
Q 030035 1 MVVGVLALQGSFNE-----HIAALKRLGVKGVEIR--K---PDQLQNVSSLIIPGGESTTMARLAEYHNLFPALREFVK- 69 (184)
Q Consensus 1 m~IgVl~~qG~~~~-----~~~~L~~~G~~v~~v~--~---~~~l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~- 69 (184)
|||.++.-.|-=.+ ..++.++.|+++.+.. . .+.++++|.+++. +...+ ..+.+++..+
T Consensus 7 mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLg--PQV~y--------~~~~ik~~~~~ 76 (108)
T 3nbm_A 7 LKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILA--PQVRS--------YYREMKVDAER 76 (108)
T ss_dssp EEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEEC--GGGGG--------GHHHHHHHHTT
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEC--hHHHH--------HHHHHHHHhhh
Confidence 68888888885444 3345666788887743 2 2235689998883 33221 2444555553
Q ss_pred cCCcEEEEc
Q 030035 70 MGKPVWGTC 78 (184)
Q Consensus 70 ~g~PvlGIC 78 (184)
.|+||.-|=
T Consensus 77 ~~ipV~vI~ 85 (108)
T 3nbm_A 77 LGIQIVATR 85 (108)
T ss_dssp TTCEEEECC
T ss_pred cCCcEEEeC
Confidence 489997664
No 104
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=62.72 E-value=22 Score=29.16 Aligned_cols=49 Identities=18% Similarity=0.321 Sum_probs=32.8
Q ss_pred EEEEEecC--C--C----HHHHHHHHHHCCCeEEEEcCCC--C---------CCCCCEEEEcCCchhH
Q 030035 2 VVGVLALQ--G--S----FNEHIAALKRLGVKGVEIRKPD--Q---------LQNVSSLIIPGGESTT 50 (184)
Q Consensus 2 ~IgVl~~q--G--~----~~~~~~~L~~~G~~v~~v~~~~--~---------l~~~DglIipGG~~~~ 50 (184)
|++|+.-. | . +..+.+.|++.|+++.+..+.. + .+++|.||.-||-+|.
T Consensus 26 ~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GGDGTv 93 (337)
T 2qv7_A 26 RARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTL 93 (337)
T ss_dssp EEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECHHHH
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhhcCCCEEEEEcCchHH
Confidence 58887653 3 2 3346677888998887764321 1 2468999999998765
No 105
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=60.63 E-value=25 Score=23.67 Aligned_cols=67 Identities=9% Similarity=0.050 Sum_probs=39.1
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCCC------CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHc-CCc
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQL------QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKM-GKP 73 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~l------~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~-g~P 73 (184)
||.|+.-.-.+.+ +.+.|++.|+++..+.+.++. ..+|.+|+|+..+. .+.+.|++. . ..|
T Consensus 20 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi~~~~~g~---------~~~~~l~~~--~~~~~ 88 (137)
T 2pln_A 20 RVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVSDKNAL---------SFVSRIKEK--HSSIV 88 (137)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEEECSTTHH---------HHHHHHHHH--STTSE
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEEEcCccHH---------HHHHHHHhc--CCCcc
Confidence 5555443333444 456788899988877654321 35788885543221 134455554 4 788
Q ss_pred EEEEch
Q 030035 74 VWGTCA 79 (184)
Q Consensus 74 vlGIC~ 79 (184)
++-+..
T Consensus 89 ii~ls~ 94 (137)
T 2pln_A 89 VLVSSD 94 (137)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 888764
No 106
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=60.60 E-value=8.6 Score=28.69 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=31.5
Q ss_pred CEEEEEecCC--------CHHHHHHHHHHCCCeEEEE---cCC-C--------CCC--CCCEEEEcCCchh
Q 030035 1 MVVGVLALQG--------SFNEHIAALKRLGVKGVEI---RKP-D--------QLQ--NVSSLIIPGGEST 49 (184)
Q Consensus 1 m~IgVl~~qG--------~~~~~~~~L~~~G~~v~~v---~~~-~--------~l~--~~DglIipGG~~~ 49 (184)
||++|++... |-.-+.+.|++.|+++... .+. + .++ ++|.||.+||.+.
T Consensus 14 ~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 14 VRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp CEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSS
T ss_pred CEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 5788887432 1223557789999987643 332 1 124 7999999998643
No 107
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=60.49 E-value=28 Score=24.38 Aligned_cols=44 Identities=9% Similarity=-0.000 Sum_probs=29.3
Q ss_pred CEEEEEec--CCCHHHHHH----HHHHCCCeEEEEc----CCCCCCC-CCEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHIA----ALKRLGVKGVEIR----KPDQLQN-VSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~----~L~~~G~~v~~v~----~~~~l~~-~DglIip 44 (184)
|||.|+.. .||-..+.+ .+++.|+++.++. +..++.+ +|.+|+.
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~l~~~~d~ii~~ 55 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLG 55 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGGGCCSTTTTTTCSEEEEE
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehhhCCHHHhcCcCCEEEEE
Confidence 88888764 466544444 3555688877664 2346778 9999884
No 108
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=59.83 E-value=23 Score=29.00 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=28.9
Q ss_pred CEEEEEecCCCHHH--HHHHHHHC-CCeEEEEcCC-------------CC-C---CCCCEEEEcCC
Q 030035 1 MVVGVLALQGSFNE--HIAALKRL-GVKGVEIRKP-------------DQ-L---QNVSSLIIPGG 46 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v~~~-------------~~-l---~~~DglIipGG 46 (184)
|||||+.. |.+.. |.+++++. +++++-+.+. ++ | .+.|+++|.-.
T Consensus 26 ~rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav~d~~~~~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGV-GKIVRDQHLPSIAKNANFKLVATASRHGTVEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECC-SHHHHHTHHHHHHHCTTEEEEEEECSSCCCTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEeCChhhcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 37998876 77654 78888875 6666655321 11 1 35888888754
No 109
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=59.81 E-value=22 Score=30.43 Aligned_cols=29 Identities=28% Similarity=0.107 Sum_probs=22.1
Q ss_pred EEEEEecCCCHHHHHHHHHHCCCeEEEEc
Q 030035 2 VVGVLALQGSFNEHIAALKRLGVKGVEIR 30 (184)
Q Consensus 2 ~IgVl~~qG~~~~~~~~L~~~G~~v~~v~ 30 (184)
||.|+.+.+.=.+..+.|.+.|.+|....
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D 39 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVND 39 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEe
Confidence 68888887766667788888888877654
No 110
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=58.85 E-value=29 Score=24.30 Aligned_cols=44 Identities=9% Similarity=0.075 Sum_probs=29.8
Q ss_pred CEEEEEec--CCCHHHHHHH----HHHCCCeEEEEc----CCCCCC-CCCEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHIAA----LKRLGVKGVEIR----KPDQLQ-NVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~----L~~~G~~v~~v~----~~~~l~-~~DglIip 44 (184)
|||.|+.. .||-..+.+. +++.|+++.+++ +..++. ++|.+|+.
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~l~~~~d~ii~g 56 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADASAENLADGYDAVLFG 56 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTTTTTTCSEEEEE
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhHhcccCCEEEEE
Confidence 58888754 5765555444 555788887775 235677 99998884
No 111
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=58.79 E-value=59 Score=24.91 Aligned_cols=46 Identities=7% Similarity=0.173 Sum_probs=28.2
Q ss_pred EEEEEecC-CC-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCc
Q 030035 2 VVGVLALQ-GS-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~q-G~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~ 47 (184)
+||++.-. .+ | .+ ..+++++.|+++.+.....+ + .++|+||+.+..
T Consensus 4 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~ 68 (290)
T 2fn9_A 4 KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTD 68 (290)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 68887642 22 2 22 33556778999887653211 1 478999997643
No 112
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=58.58 E-value=28 Score=25.53 Aligned_cols=44 Identities=23% Similarity=0.275 Sum_probs=27.9
Q ss_pred CEEEEEecC--CCHHHHH----HHHHH-CCCeEEEEcC-----------------------CCCCCCCCEEEEc
Q 030035 1 MVVGVLALQ--GSFNEHI----AALKR-LGVKGVEIRK-----------------------PDQLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~q--G~~~~~~----~~L~~-~G~~v~~v~~-----------------------~~~l~~~DglIip 44 (184)
|||.|+... ||-..+. +.+++ .|+++.+++- .+++.++|+||+.
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~g 75 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFG 75 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCCSCHHHHHHTTCCCCCSCBCCGGGGGGCSEEEEE
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccccCchhhhhhcccccccCchhhHHHHHHCCEEEEE
Confidence 588887653 5443333 44566 7888776642 2345689999984
No 113
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=57.98 E-value=17 Score=26.95 Aligned_cols=30 Identities=17% Similarity=0.079 Sum_probs=20.2
Q ss_pred CEEEEEec--CCCHHHHHHHHHH-CCCeEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHIAALKR-LGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~-~G~~v~~v~ 30 (184)
|||.|+.+ .||-..+.+.+.+ .+.++..+.
T Consensus 14 mkilIvY~S~tGnT~~vA~~Ia~~l~~d~~~I~ 46 (171)
T 4ici_A 14 SKILVAYFSATGTTARAAEKLGAAVGGDLYPIA 46 (171)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTCEEEECC
T ss_pred CCEEEEEECCCChHHHHHHHHHHHhCCCeEEEe
Confidence 68888866 5677777766644 577765553
No 114
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=57.36 E-value=38 Score=24.84 Aligned_cols=30 Identities=17% Similarity=0.115 Sum_probs=18.5
Q ss_pred CEEEEEec--CCCHHHHH----HHHHHCCCeEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHI----AALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~----~~L~~~G~~v~~v~ 30 (184)
|||.|+.. .||-..+. +.+++.|+++.+++
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~ 41 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRT 41 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEB
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEE
Confidence 48888765 35433333 44566788887765
No 115
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=56.94 E-value=51 Score=24.90 Aligned_cols=67 Identities=15% Similarity=0.140 Sum_probs=38.3
Q ss_pred EEEEEecCCC--H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQGS--F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG~--~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-.-+ | .+ +.+.+++.|+++.+.....+ + .++||+|+.+..... .+
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~----------~~ 73 (272)
T 3o74_A 4 TLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPE----------DD 73 (272)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSS----------CC
T ss_pred EEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc----------HH
Confidence 6888764322 2 22 33556778999888754322 1 479999997753211 11
Q ss_pred HHHHHHHcCCcEEEEc
Q 030035 63 ALREFVKMGKPVWGTC 78 (184)
Q Consensus 63 ~l~~~~~~g~PvlGIC 78 (184)
.++++.+.++|+.-+.
T Consensus 74 ~~~~~~~~~iPvV~~~ 89 (272)
T 3o74_A 74 SYRELQDKGLPVIAID 89 (272)
T ss_dssp HHHHHHHTTCCEEEES
T ss_pred HHHHHHHcCCCEEEEc
Confidence 2333334677876553
No 116
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=56.84 E-value=61 Score=24.98 Aligned_cols=68 Identities=19% Similarity=0.168 Sum_probs=39.0
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCC---------CC--CCCCEEEEcCCchhHHHHHHhcCChHHH
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPD---------QL--QNVSSLIIPGGESTTMARLAEYHNLFPA 63 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~---------~l--~~~DglIipGG~~~~~~~l~~~~~l~~~ 63 (184)
+||++.-.- + | .+ +.+++++.|+++.+....+ .+ .++|+||+.+..... ..+.
T Consensus 4 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~---------~~~~ 74 (306)
T 8abp_A 4 KLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKL---------GSAI 74 (306)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCGGG---------HHHH
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCchh---------hHHH
Confidence 688876432 1 2 22 3355677899887765421 11 468999998753332 1223
Q ss_pred HHHHHHcCCcEEEEc
Q 030035 64 LREFVKMGKPVWGTC 78 (184)
Q Consensus 64 l~~~~~~g~PvlGIC 78 (184)
++++.+.|+|+.-+-
T Consensus 75 ~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 75 VAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHTTCEEEEES
T ss_pred HHHHHHCCCcEEEeC
Confidence 444555688876553
No 117
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=56.57 E-value=33 Score=27.84 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=19.0
Q ss_pred CEEEEEecCCCHHH-HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |+... |.+.|.+. +++++.+
T Consensus 5 ~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av 34 (344)
T 3euw_A 5 LRIALFGA-GRIGHVHAANIAANPDLELVVI 34 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCTTEEEEEE
T ss_pred eEEEEECC-cHHHHHHHHHHHhCCCcEEEEE
Confidence 37999887 66544 67777775 6666644
No 118
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=56.41 E-value=36 Score=27.83 Aligned_cols=15 Identities=13% Similarity=0.348 Sum_probs=12.7
Q ss_pred CCCCCCCEEEEcCCc
Q 030035 33 DQLQNVSSLIIPGGE 47 (184)
Q Consensus 33 ~~l~~~DglIipGG~ 47 (184)
++++++|.+||++|.
T Consensus 65 ~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 65 SLLKGSEIIVVTAGL 79 (294)
T ss_dssp GGGTTCSEEEECCCC
T ss_pred HHhCCCCEEEEecCC
Confidence 457899999999983
No 119
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=55.62 E-value=74 Score=25.06 Aligned_cols=67 Identities=24% Similarity=0.265 Sum_probs=36.9
Q ss_pred EEEEEecCCC-H-HHHH----HHHHHC-CCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQGS-F-NEHI----AALKRL-GVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG~-~-~~~~----~~L~~~-G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-..+ | .++. +.+++. |+++.+.....+ + .++||||+.+...... .+
T Consensus 8 ~Igvi~~~~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~---------~~ 78 (325)
T 2x7x_A 8 RIGVAQCSDDSWRHKMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPM---------TP 78 (325)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHHH---------HH
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHH---------HH
Confidence 6888765433 2 2232 345567 898887643221 1 4799999976543221 12
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++.+.+.++|+..+
T Consensus 79 ~~~~~~~~~iPvV~~ 93 (325)
T 2x7x_A 79 IVEEAYQKGIPVILV 93 (325)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 233333457787654
No 120
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=54.69 E-value=6.5 Score=31.31 Aligned_cols=44 Identities=18% Similarity=0.340 Sum_probs=32.3
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCCCCCCCEEEEcC
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~l~~~DglIipG 45 (184)
|||+|+.. |++.. +...|++.|.++..+..++++.++|.+-+|-
T Consensus 7 mkI~IIG~-G~~G~sLA~~L~~~G~~V~~~~~~~~~~~aDilavP~ 51 (232)
T 3dfu_A 7 LRVGIFDD-GSSTVNMAEKLDSVGHYVTVLHAPEDIRDFELVVIDA 51 (232)
T ss_dssp CEEEEECC-SCCCSCHHHHHHHTTCEEEECSSGGGGGGCSEEEECS
T ss_pred cEEEEEee-CHHHHHHHHHHHHCCCEEEEecCHHHhccCCEEEEcH
Confidence 79999876 66643 5688999999988887666677888333343
No 121
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=53.81 E-value=56 Score=25.42 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=37.8
Q ss_pred CEEEEEecC-CC--HHH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 1 MVVGVLALQ-GS--FNE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 1 m~IgVl~~q-G~--~~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
.+||++.-. ++ +.. ..+.+++.|+++.+.....+ + .++||||+.+..... ..
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---------~~ 73 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATG---------WE 73 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSS---------CH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhh---------HH
Confidence 378887643 32 222 33556778999887653221 1 368999997643221 11
Q ss_pred HHHHHHHHcCCcEEEE
Q 030035 62 PALREFVKMGKPVWGT 77 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGI 77 (184)
+.++++.+.++|+.-+
T Consensus 74 ~~~~~~~~~~iPvV~~ 89 (306)
T 2vk2_A 74 PVLKEAKDAEIPVFLL 89 (306)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEe
Confidence 2233333457777654
No 122
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=53.56 E-value=60 Score=25.88 Aligned_cols=68 Identities=16% Similarity=0.070 Sum_probs=39.2
Q ss_pred CEEEEEecC--C-CHH-H----HHHHHHHCCCeEEEEcCCCC-----------C---CCCCEEEEcCCchhHHHHHHhcC
Q 030035 1 MVVGVLALQ--G-SFN-E----HIAALKRLGVKGVEIRKPDQ-----------L---QNVSSLIIPGGESTTMARLAEYH 58 (184)
Q Consensus 1 m~IgVl~~q--G-~~~-~----~~~~L~~~G~~v~~v~~~~~-----------l---~~~DglIipGG~~~~~~~l~~~~ 58 (184)
++||++.-. . .|. + +.+++++.|+++.+.....+ + .++|+||+.+... .
T Consensus 4 ~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~~~-~-------- 74 (350)
T 3h75_A 4 TSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQY-V-------- 74 (350)
T ss_dssp CEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECCSS-H--------
T ss_pred CEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCchh-h--------
Confidence 378887642 2 232 2 33456678999888753221 1 3799999976221 1
Q ss_pred ChHHHHHHHHHcCCcEEEEc
Q 030035 59 NLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 59 ~l~~~l~~~~~~g~PvlGIC 78 (184)
..+.++++.+.|+|++-+.
T Consensus 75 -~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 75 -APQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp -HHHHHHHHTTSCCEEEEEE
T ss_pred -HHHHHHHHHhCCCcEEEEc
Confidence 1233445555688887653
No 123
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=53.31 E-value=14 Score=27.50 Aligned_cols=49 Identities=14% Similarity=0.207 Sum_probs=31.4
Q ss_pred CEEEEEec-----CCC-----HHHHHHHHHHCCCeEE---EEcCCCC--------C-CCCCEEEEcCCchh
Q 030035 1 MVVGVLAL-----QGS-----FNEHIAALKRLGVKGV---EIRKPDQ--------L-QNVSSLIIPGGEST 49 (184)
Q Consensus 1 m~IgVl~~-----qG~-----~~~~~~~L~~~G~~v~---~v~~~~~--------l-~~~DglIipGG~~~ 49 (184)
+||+||.. .|. -.-+...|++.|+++. ++.+.+. + .++|.||.+||.+.
T Consensus 8 ~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 8 RSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp CEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 47888874 342 2335578899999875 4444322 2 26999999998654
No 124
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=53.09 E-value=76 Score=24.42 Aligned_cols=68 Identities=15% Similarity=0.021 Sum_probs=37.9
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCC-eEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGV-KGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~-~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
+|||+.-.- + | .. +.+.+++.|. ++.+.....+ + .++|+||+.+...... .
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~---------~ 74 (309)
T 2fvy_A 4 RIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAA---------G 74 (309)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHTCTTEEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGH---------H
T ss_pred EEEEEeccCCcHHHHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchh---------H
Confidence 688876422 2 2 22 3345667897 8877643211 1 4799999976533221 1
Q ss_pred HHHHHHHHcCCcEEEEc
Q 030035 62 PALREFVKMGKPVWGTC 78 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGIC 78 (184)
+.++.+.+.++|+.-+.
T Consensus 75 ~~~~~~~~~~iPvV~~~ 91 (309)
T 2fvy_A 75 TVIEKARGQNVPVVFFN 91 (309)
T ss_dssp HHHHHHHTTTCCEEEES
T ss_pred HHHHHHHHCCCcEEEec
Confidence 22334444678887654
No 125
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=53.00 E-value=19 Score=26.69 Aligned_cols=30 Identities=7% Similarity=-0.156 Sum_probs=18.7
Q ss_pred CEEEEEecC----CCHHHHHHHHHH---CCCeEEEEc
Q 030035 1 MVVGVLALQ----GSFNEHIAALKR---LGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~q----G~~~~~~~~L~~---~G~~v~~v~ 30 (184)
|||.|+... |+-..+.+.+.+ .|.++.++.
T Consensus 7 Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~d 43 (193)
T 1rtt_A 7 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELAD 43 (193)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECC
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEe
Confidence 688887653 555556666544 367777765
No 126
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=52.83 E-value=95 Score=25.45 Aligned_cols=28 Identities=14% Similarity=0.215 Sum_probs=19.5
Q ss_pred CEEEEEecCCCH--HHHHHHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSF--NEHIAALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~--~~~~~~L~~~G~~v~~v 29 (184)
+||||+.. |.. ..+...++..+++++-+
T Consensus 27 irvgiiG~-G~~~~~~~~~~~~~~~~~lvav 56 (361)
T 3u3x_A 27 LRFAAVGL-NHNHIYGQVNCLLRAGARLAGF 56 (361)
T ss_dssp CEEEEECC-CSTTHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEECc-CHHHHHHHHHHhhcCCcEEEEE
Confidence 37999886 433 34667777788887765
No 127
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=52.07 E-value=4.5 Score=34.74 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=42.9
Q ss_pred CEEEEEecCCC------HHHHHHHHHHC--CCeEEEEcC--------C-------------------CC-CCCCCEEEEc
Q 030035 1 MVVGVLALQGS------FNEHIAALKRL--GVKGVEIRK--------P-------------------DQ-LQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~qG~------~~~~~~~L~~~--G~~v~~v~~--------~-------------------~~-l~~~DglIip 44 (184)
++|+|+.-.++ ..++.+.|++. |+++.+-.. . ++ ..++|.+|.-
T Consensus 42 k~V~II~n~~~~~~~~~~~~l~~~L~~~~~gi~V~ve~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvl 121 (388)
T 3afo_A 42 QNVYITKKPWTPSTREAMVEFITHLHESYPEVNVIVQPDVAEEISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTL 121 (388)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHCTTCEEECCHHHHHHHHTTCCSCGGGCTTSCEEEEECCHHHHHHHCSEEEEE
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCchhhhhhhhccccccccccccccccccchhhcccCCCEEEEE
Confidence 36888887664 23345667776 777654321 0 00 1247999999
Q ss_pred CCchhHHHHHHhcCChHHHHHHHHHcCC-cEEEEchH
Q 030035 45 GGESTTMARLAEYHNLFPALREFVKMGK-PVWGTCAG 80 (184)
Q Consensus 45 GG~~~~~~~l~~~~~l~~~l~~~~~~g~-PvlGIC~G 80 (184)
||-+|.. ...+.+...++ |++||=.|
T Consensus 122 GGDGTlL----------~aa~~~~~~~vpPiLGIN~G 148 (388)
T 3afo_A 122 GGDGTIL----------HGVSMFGNTQVPPVLAFALG 148 (388)
T ss_dssp ESHHHHH----------HHHHTTTTSCCCCEEEEECS
T ss_pred eCcHHHH----------HHHHHhcccCCCeEEEEECC
Confidence 9988753 22333334467 89999776
No 128
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=51.77 E-value=8.7 Score=28.51 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=31.3
Q ss_pred CEEEEEec-----CC-----CHHHHHHHHHHCCCeEEEE---cCC-CC--------CC--CCCEEEEcCCchh
Q 030035 1 MVVGVLAL-----QG-----SFNEHIAALKRLGVKGVEI---RKP-DQ--------LQ--NVSSLIIPGGEST 49 (184)
Q Consensus 1 m~IgVl~~-----qG-----~~~~~~~~L~~~G~~v~~v---~~~-~~--------l~--~~DglIipGG~~~ 49 (184)
||++|++. .| |-.-+.+.|++.|+++... .+. +. ++ ++|.||.+||.+.
T Consensus 2 ~~v~Ii~tGdEl~~G~i~D~n~~~l~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 2 FRVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp EEEEEEEECHHHHHTSSCCCHHHHHHHHHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred cEEEEEEEcCcccCCCcccchHHHHHHHHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 47888874 23 2233557888899877643 332 11 23 6999999998653
No 129
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=51.77 E-value=27 Score=27.85 Aligned_cols=28 Identities=21% Similarity=0.360 Sum_probs=19.4
Q ss_pred CEEEEEecCCCHHH--HHHHHHH-CCCeEEEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKR-LGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~-~G~~v~~v 29 (184)
|||||+.. |++.. |.+.|.+ .+++++.+
T Consensus 7 ~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av 37 (308)
T 3uuw_A 7 IKMGMIGL-GSIAQKAYLPILTKSERFEFVGA 37 (308)
T ss_dssp CEEEEECC-SHHHHHHTHHHHTSCSSSEEEEE
T ss_pred CcEEEEec-CHHHHHHHHHHHHhCCCeEEEEE
Confidence 48999876 76664 5677776 46777644
No 130
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=51.67 E-value=17 Score=27.20 Aligned_cols=48 Identities=19% Similarity=0.309 Sum_probs=30.9
Q ss_pred CEEEEEecC---C-----CHHHHHHHHHHCCCeEEEE---cCC-CC--------CC--CCCEEEEcCCch
Q 030035 1 MVVGVLALQ---G-----SFNEHIAALKRLGVKGVEI---RKP-DQ--------LQ--NVSSLIIPGGES 48 (184)
Q Consensus 1 m~IgVl~~q---G-----~~~~~~~~L~~~G~~v~~v---~~~-~~--------l~--~~DglIipGG~~ 48 (184)
||++|++.. | |-.-+.+.|++.|+++... .+. +. ++ ++|.||.+||.+
T Consensus 11 ~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g 80 (172)
T 1mkz_A 11 TRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTG 80 (172)
T ss_dssp CEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCS
T ss_pred CEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 588988753 2 2233557899999987643 332 11 12 499999999854
No 131
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=50.28 E-value=82 Score=24.00 Aligned_cols=71 Identities=20% Similarity=0.147 Sum_probs=41.2
Q ss_pred EEEEEecCC--C-HHH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQG--S-FNE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG--~-~~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-.- . +.+ +.+.+++.|+++.+.....+ + .++||||+.+...... ....+
T Consensus 17 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~------~~~~~ 90 (298)
T 3tb6_A 17 TIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQ------TPNIG 90 (298)
T ss_dssp EEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSC------CTTHH
T ss_pred eEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEeccccccc------CCcHH
Confidence 688876432 2 222 33557778999888754322 1 4799999987533210 01123
Q ss_pred HHHHHHHcCCcEEEEc
Q 030035 63 ALREFVKMGKPVWGTC 78 (184)
Q Consensus 63 ~l~~~~~~g~PvlGIC 78 (184)
.++++.+.++|+.-+.
T Consensus 91 ~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 91 YYLNLEKNGIPFAMIN 106 (298)
T ss_dssp HHHHHHHTTCCEEEES
T ss_pred HHHHHHhcCCCEEEEe
Confidence 4555556788887664
No 132
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=50.06 E-value=32 Score=24.93 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=28.6
Q ss_pred CEEEEEec--CCCHHHHHH----HHHHCCCeEEEEcCCC----C----CCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHIA----ALKRLGVKGVEIRKPD----Q----LQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~----~L~~~G~~v~~v~~~~----~----l~~~DglIipG 45 (184)
|||.|+.. .||-..+.+ .|+..|+++.+++-.+ + +.++|+||+.-
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~Gs 59 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRAVDPQELIEAVSSARGIVLGT 59 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTTCCHHHHHHHHHHCSEEEEEC
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHhCCEEEEEc
Confidence 88888865 577655544 4566788877775322 1 23689998854
No 133
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=49.84 E-value=45 Score=26.88 Aligned_cols=46 Identities=17% Similarity=0.361 Sum_probs=28.2
Q ss_pred CEEEEEecCCCHHH-HHHHHHH-CCCeEEEE-c-CC-------------CC---CCCCCEEEEcCCc
Q 030035 1 MVVGVLALQGSFNE-HIAALKR-LGVKGVEI-R-KP-------------DQ---LQNVSSLIIPGGE 47 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~-~G~~v~~v-~-~~-------------~~---l~~~DglIipGG~ 47 (184)
|||||+.. |++.. |.+.|++ .+++++-+ . ++ ++ ..++|.+++.-..
T Consensus 10 irv~IIG~-G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~~~~DvViiatp~ 75 (304)
T 3bio_A 10 IRAAIVGY-GNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQLESVDVALVCSPS 75 (304)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGSSSCCEEEECSCH
T ss_pred CEEEEECC-hHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhCCCCCEEEECCCc
Confidence 37898876 77654 6777776 45666532 1 11 11 2468999997653
No 134
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=49.76 E-value=83 Score=23.93 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=27.0
Q ss_pred EEEEEecC--CC-HHHH----HHHHHHCCCeEEEEcCCCC----CC-CCCEEEEcCC
Q 030035 2 VVGVLALQ--GS-FNEH----IAALKRLGVKGVEIRKPDQ----LQ-NVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~q--G~-~~~~----~~~L~~~G~~v~~v~~~~~----l~-~~DglIipGG 46 (184)
+|||+.-. .. +.++ .+.+++.|+++.+.....+ .. ++||||+.+.
T Consensus 10 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~vdgiI~~~~ 66 (277)
T 3cs3_A 10 IIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKSHLFIPEKMVDGAIILDW 66 (277)
T ss_dssp EEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTTTTTCCCTTTCSEEEEECT
T ss_pred EEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCCCHHHHhhccccEEEEecC
Confidence 68887632 22 2333 3456678998877643211 11 7999999765
No 135
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=49.23 E-value=70 Score=24.61 Aligned_cols=66 Identities=15% Similarity=0.150 Sum_probs=36.7
Q ss_pred EEEEEecCC----C-HHHHH----HHHHHCCCeEEEEcCCC---C-------C--CCCCEEEEcCCchhHHHHHHhcCCh
Q 030035 2 VVGVLALQG----S-FNEHI----AALKRLGVKGVEIRKPD---Q-------L--QNVSSLIIPGGESTTMARLAEYHNL 60 (184)
Q Consensus 2 ~IgVl~~qG----~-~~~~~----~~L~~~G~~v~~v~~~~---~-------l--~~~DglIipGG~~~~~~~l~~~~~l 60 (184)
+|||+.-.- . +.++. +.+++.|+++.+..... . + ..+||+|+.+.....
T Consensus 10 ~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~---------- 79 (288)
T 3gv0_A 10 VIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND---------- 79 (288)
T ss_dssp EEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC----------
T ss_pred EEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc----------
Confidence 588875431 2 33333 44566799888764221 1 1 479999997643221
Q ss_pred HHHHHHHHHcCCcEEEEc
Q 030035 61 FPALREFVKMGKPVWGTC 78 (184)
Q Consensus 61 ~~~l~~~~~~g~PvlGIC 78 (184)
+.++.+.+.++|+.-+.
T Consensus 80 -~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 80 -PRVRFMTERNMPFVTHG 96 (288)
T ss_dssp -HHHHHHHHTTCCEEEES
T ss_pred -HHHHHHhhCCCCEEEEC
Confidence 22333444678876553
No 136
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=48.74 E-value=31 Score=28.41 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=27.9
Q ss_pred CEEEEEec--CCCHHHHH----HHHHHCCCeEEEEcCCC--------CCCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHI----AALKRLGVKGVEIRKPD--------QLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~----~~L~~~G~~v~~v~~~~--------~l~~~DglIipG 45 (184)
|||.|+.. .||-..+. +.+++.|+++.++.-.+ ++.++|+||+.-
T Consensus 257 ~k~~i~~~S~~gnT~~la~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~d~iiigs 315 (404)
T 2ohh_A 257 ERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIALGA 315 (404)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHTTTCEEEEEETTTSCHHHHHHHHHTCSEEEEEC
T ss_pred CcEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEEEEC
Confidence 56666654 35544444 34555688887775322 356899999954
No 137
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=48.69 E-value=34 Score=28.27 Aligned_cols=27 Identities=11% Similarity=0.341 Sum_probs=18.9
Q ss_pred EEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 2 VVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
||||+.. |.... |.+.+++. +++++-+
T Consensus 9 rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av 38 (364)
T 3e82_A 9 NIALIGY-GFVGKTFHAPLIRSVPGLNLAFV 38 (364)
T ss_dssp EEEEECC-SHHHHHTHHHHHHTSTTEEEEEE
T ss_pred eEEEECC-CHHHHHHHHHHHhhCCCeEEEEE
Confidence 7898887 77654 66777775 6676644
No 138
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=48.35 E-value=35 Score=28.17 Aligned_cols=71 Identities=17% Similarity=0.268 Sum_probs=41.6
Q ss_pred EEEEEecCCC--------HHHHHHHHHHCCCeEEEEcCC---------------CCC------CCCCEEEEc-CCchhHH
Q 030035 2 VVGVLALQGS--------FNEHIAALKRLGVKGVEIRKP---------------DQL------QNVSSLIIP-GGESTTM 51 (184)
Q Consensus 2 ~IgVl~~qG~--------~~~~~~~L~~~G~~v~~v~~~---------------~~l------~~~DglIip-GG~~~~~ 51 (184)
||||++-.+. +..-++.|++.|.++++-... +|| ++.|+|+-. ||+.+.
T Consensus 14 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~- 92 (327)
T 4h1h_A 14 EIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSN- 92 (327)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCGG-
T ss_pred EEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchhHH-
Confidence 7999986543 223456788899999875421 122 367888875 677654
Q ss_pred HHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 52 ARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 52 ~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
++.+.-+ .+.|+ ++-|+++|--
T Consensus 93 -rlL~~LD-~~~i~---~~PK~~~GyS 114 (327)
T 4h1h_A 93 -QLLPYLD-YDLIS---ENPKILCGFS 114 (327)
T ss_dssp -GGGGGCC-HHHHH---HSCCEEEECT
T ss_pred -HHhhhcc-hhhhc---cCCeEEEecc
Confidence 3333212 23444 3567777743
No 139
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=48.05 E-value=42 Score=27.00 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=18.1
Q ss_pred CEEEEEecCCCHHH--HHHHHHHC-CCeEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKRL-GVKGV 27 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~~-G~~v~ 27 (184)
|||||+.. |+... +.+.|.+. +++++
T Consensus 3 ~~igiIG~-G~ig~~~~~~~l~~~~~~~l~ 31 (323)
T 1xea_A 3 LKIAMIGL-GDIAQKAYLPVLAQWPDIELV 31 (323)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEE
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCCCceEE
Confidence 38898876 77754 67777664 66666
No 140
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=47.93 E-value=54 Score=26.75 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=32.6
Q ss_pred EEEEEecC--CC---HHHHHHHHHHCCCeEEEEcC--CCC-------C--CCCCEEEEcCCchhH
Q 030035 2 VVGVLALQ--GS---FNEHIAALKRLGVKGVEIRK--PDQ-------L--QNVSSLIIPGGESTT 50 (184)
Q Consensus 2 ~IgVl~~q--G~---~~~~~~~L~~~G~~v~~v~~--~~~-------l--~~~DglIipGG~~~~ 50 (184)
|++|+... |. +.++.+.|++.|+++.+..+ +.+ . .++|.||.-||-+|.
T Consensus 31 ~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~GGDGTl 95 (332)
T 2bon_A 31 ASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTI 95 (332)
T ss_dssp CEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEecCcchHHHHHHHHHhcCCCEEEEEccchHH
Confidence 57777642 32 34466778889988876643 221 1 368999999998775
No 141
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=47.92 E-value=89 Score=23.72 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=36.9
Q ss_pred CEEEEEecCC-C-H-HHH----HHHHHHCCCeEEEEcCCCC-----------C-CCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 1 MVVGVLALQG-S-F-NEH----IAALKRLGVKGVEIRKPDQ-----------L-QNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 1 m~IgVl~~qG-~-~-~~~----~~~L~~~G~~v~~v~~~~~-----------l-~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
++||++.-.- + | .++ .+.+++.|+++.+.....+ + ..+||||+.+..... ..
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---------~~ 72 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDA---------VG 72 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTT---------TH
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHH---------HH
Confidence 4688876432 2 2 222 3456678998887643211 1 368999997643221 12
Q ss_pred HHHHHHHHcCCcEEEE
Q 030035 62 PALREFVKMGKPVWGT 77 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGI 77 (184)
+.++++.+.++|+.-+
T Consensus 73 ~~~~~~~~~~iPvV~i 88 (271)
T 2dri_A 73 NAVKMANQANIPVITL 88 (271)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCcEEEe
Confidence 2334444457777544
No 142
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=47.89 E-value=37 Score=27.52 Aligned_cols=28 Identities=11% Similarity=0.259 Sum_probs=18.9
Q ss_pred CEEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |.+.. +..++++. +++++-+
T Consensus 24 irigiIG~-G~ig~~~~~~~~~~~~~~~lvav 54 (350)
T 4had_A 24 LRFGIIST-AKIGRDNVVPAIQDAENCVVTAI 54 (350)
T ss_dssp EEEEEESC-CHHHHHTHHHHHHHCSSEEEEEE
T ss_pred cEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEE
Confidence 38999775 66653 46778775 6676655
No 143
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=47.56 E-value=29 Score=24.82 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=20.4
Q ss_pred CEEEEEec--CCCHHHHHHHH-HHC-CCeEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHIAAL-KRL-GVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L-~~~-G~~v~~v~ 30 (184)
|||.|+.+ .||-..+.+.+ +.+ +.++..++
T Consensus 4 ~kilIvY~S~tGnT~~iA~~Ia~~l~~~~~~~i~ 37 (151)
T 3edo_A 4 KKTLILYYSWSGETKKMAEKINSEIKDSELKEVK 37 (151)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHSTTCEEEECB
T ss_pred CcEEEEEECCCCcHHHHHHHHHHhccCCCEEEEE
Confidence 37888765 57888888888 555 66654443
No 144
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=47.50 E-value=23 Score=31.89 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=30.3
Q ss_pred HHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcCCc
Q 030035 13 NEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPGGE 47 (184)
Q Consensus 13 ~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipGG~ 47 (184)
..+.++|.++|+.+.++...++|.+++.||+|.=.
T Consensus 428 ~~~y~al~~~g~~vd~v~~~~~l~~y~lvv~P~~~ 462 (645)
T 1kwg_A 428 YLFYSALRRLGLDVDVVPPGASLRGYAFAVVPSLP 462 (645)
T ss_dssp HHHHHHHHTTTCCEEEECTTSCCTTCSEEEESCCS
T ss_pred HHHHHHHHHhCCCeeEECCCCCcccCCEEEEechh
Confidence 34668899999999999887889999999999854
No 145
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=47.27 E-value=18 Score=29.07 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=42.6
Q ss_pred HHHHHHHCCCeEEEEcC-------C---CCCCCCCEEEEcCCchhHH----HHHHh---cCChHHHHHHHHHcCCcEEEE
Q 030035 15 HIAALKRLGVKGVEIRK-------P---DQLQNVSSLIIPGGESTTM----ARLAE---YHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 15 ~~~~L~~~G~~v~~v~~-------~---~~l~~~DglIipGG~~~~~----~~l~~---~~~l~~~l~~~~~~g~PvlGI 77 (184)
+.++|+..++++..+.. | ++|+++|.||+..=..... +...+ .....+.|++++++|.-++.+
T Consensus 38 ~~~aL~~~~~~V~~i~~~~~~~~fP~~~~~L~~yDvIIl~d~~~~~~l~~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~ 117 (248)
T 3soz_A 38 LLSCLRQGNIDVDYMPAHIVQTRFPQTAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMI 117 (248)
T ss_dssp HHHHHTTTTCEEEEEETTHHHHSCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhcCCceeEEeCchhhhhhCCCChHHHhcCCEEEEcCCCcchhccCccccccccCCHHHHHHHHHHHHhCCEEEEE
Confidence 66889999999998753 1 3467999999985222221 00101 123478999999998877776
Q ss_pred c
Q 030035 78 C 78 (184)
Q Consensus 78 C 78 (184)
-
T Consensus 118 g 118 (248)
T 3soz_A 118 G 118 (248)
T ss_dssp C
T ss_pred c
Confidence 3
No 146
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=47.20 E-value=41 Score=27.45 Aligned_cols=28 Identities=14% Similarity=0.387 Sum_probs=19.3
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC--CCeEEEE
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL--GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~--G~~v~~v 29 (184)
|||||+.. |+.. .|.+.|.+. +++++.+
T Consensus 14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav 44 (354)
T 3q2i_A 14 IRFALVGC-GRIANNHFGALEKHADRAELIDV 44 (354)
T ss_dssp EEEEEECC-STTHHHHHHHHHHTTTTEEEEEE
T ss_pred ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEE
Confidence 47999877 5554 477888876 6776644
No 147
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=47.10 E-value=39 Score=24.83 Aligned_cols=30 Identities=23% Similarity=0.097 Sum_probs=17.7
Q ss_pred CEEEEEecC-CCHHHHH----HHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQ-GSFNEHI----AALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~q-G~~~~~~----~~L~~~G~~v~~v~ 30 (184)
|||.|+... |+-..+. +.+++.|+++.+++
T Consensus 5 mkilii~~S~g~T~~la~~i~~~l~~~g~~v~~~~ 39 (199)
T 2zki_A 5 PNILVLFYGYGSIVELAKEIGKGAEEAGAEVKIRR 39 (199)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred cEEEEEEeCccHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 578777654 4333333 34555688887764
No 148
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=46.99 E-value=94 Score=23.75 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=36.5
Q ss_pred EEEEEecC-CC--HHHH----HHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ-GS--FNEH----IAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q-G~--~~~~----~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-. .| +.++ .+.+++.|+++.+.....+ + .++||||+.+..... ..+
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---------~~~ 73 (283)
T 2ioy_A 3 TIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDA---------VVT 73 (283)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTTT---------THH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhh---------hHH
Confidence 68887532 22 2333 3456678999887643221 1 468999996543221 122
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++++.+.++|+.-+
T Consensus 74 ~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 74 AIKEANSKNIPVITI 88 (283)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 334444557777544
No 149
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=46.79 E-value=30 Score=26.38 Aligned_cols=37 Identities=24% Similarity=0.503 Sum_probs=24.2
Q ss_pred HHHHHHHHH----HCCCeEEEEcCCCC------C----CCCCEEEE-cCCch
Q 030035 12 FNEHIAALK----RLGVKGVEIRKPDQ------L----QNVSSLII-PGGES 48 (184)
Q Consensus 12 ~~~~~~~L~----~~G~~v~~v~~~~~------l----~~~DglIi-pGG~~ 48 (184)
+.++.+.++ +.|+++....+..+ + .++|+||| ||++.
T Consensus 55 L~dI~~~l~~~a~~~G~~l~~~QSN~EGeLId~Ih~A~~~~dgIIINPgAyT 106 (172)
T 3n8k_A 55 HDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLT 106 (172)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHHHHHTCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhh
Confidence 555555554 47899988865421 1 35899999 88764
No 150
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=46.73 E-value=67 Score=24.88 Aligned_cols=32 Identities=9% Similarity=0.090 Sum_probs=21.5
Q ss_pred HHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCc
Q 030035 16 IAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGE 47 (184)
Q Consensus 16 ~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~ 47 (184)
.+.+++.|+++.+.....+ + ..+||||+.+..
T Consensus 35 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~ 78 (295)
T 3hcw_A 35 SETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSK 78 (295)
T ss_dssp HHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCC
T ss_pred HHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcc
Confidence 3556778999887653321 1 479999997643
No 151
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=46.22 E-value=62 Score=24.88 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=39.4
Q ss_pred EEEEEecCC--CH-HH----HHHHHHHCCCeEEEEcCCC--C----------C--CCCCEEEEcCCchhHHHHHHhcCCh
Q 030035 2 VVGVLALQG--SF-NE----HIAALKRLGVKGVEIRKPD--Q----------L--QNVSSLIIPGGESTTMARLAEYHNL 60 (184)
Q Consensus 2 ~IgVl~~qG--~~-~~----~~~~L~~~G~~v~~v~~~~--~----------l--~~~DglIipGG~~~~~~~l~~~~~l 60 (184)
+|||+.-.- .| .+ +.+++++.|+++.+..... + + .++|+||+.+..... +
T Consensus 7 ~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~---------~ 77 (304)
T 3o1i_D 7 KICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHA---------Y 77 (304)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTS---------S
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhH---------H
Confidence 688876322 22 22 3355677899988876443 2 1 378999998654331 1
Q ss_pred HHHHHHHHHcCCcEEEE
Q 030035 61 FPALREFVKMGKPVWGT 77 (184)
Q Consensus 61 ~~~l~~~~~~g~PvlGI 77 (184)
.+.++++. .++|+.-+
T Consensus 78 ~~~~~~~~-~~iPvV~~ 93 (304)
T 3o1i_D 78 EHNLKSWV-GNTPVFAT 93 (304)
T ss_dssp TTTHHHHT-TTSCEEEC
T ss_pred HHHHHHHc-CCCCEEEe
Confidence 22344555 68888876
No 152
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=46.17 E-value=64 Score=24.02 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=38.8
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCCCeEEEEcCCC------------CC-----CCCCEEEEcC----CchhHHH
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLGVKGVEIRKPD------------QL-----QNVSSLIIPG----GESTTMA 52 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G~~v~~v~~~~------------~l-----~~~DglIipG----G~~~~~~ 52 (184)
+||||+.-.-|-. .-.+.|++.|.++.+++-|. +- .+||++|--| |+..-++
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG~VIrG~T~Hfd 92 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFD 92 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEEEEECCSSSTTH
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEeeeeecCCchHHH
Confidence 3788877554422 12356777887666554331 11 4699888776 4322233
Q ss_pred HHHhcCChHHHHHHHHHcCCcE
Q 030035 53 RLAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 53 ~l~~~~~l~~~l~~~~~~g~Pv 74 (184)
..... -.....+--++.++||
T Consensus 93 ~Va~~-v~~gl~~vsl~~~vPV 113 (157)
T 2i0f_A 93 IVSNE-SCRALTDLSVEESIAI 113 (157)
T ss_dssp HHHHH-HHHHHHHHHHHTTCCE
T ss_pred HHHHH-HHHHHHHHHhhcCCCE
Confidence 33332 1122333444678997
No 153
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=45.71 E-value=68 Score=26.31 Aligned_cols=15 Identities=20% Similarity=0.266 Sum_probs=12.2
Q ss_pred CCCCCCCEEEEcCCc
Q 030035 33 DQLQNVSSLIIPGGE 47 (184)
Q Consensus 33 ~~l~~~DglIipGG~ 47 (184)
+++.++|.+|++.|.
T Consensus 65 ~a~~~aDvVii~ag~ 79 (314)
T 3nep_X 65 GPTEDSDVCIITAGL 79 (314)
T ss_dssp GGGTTCSEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 456789999999874
No 154
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=45.69 E-value=39 Score=28.02 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=28.3
Q ss_pred CEEEEEec--CCCHHHHH----HHHHHCCCeEEEEcCC--C------CCCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHI----AALKRLGVKGVEIRKP--D------QLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~----~~L~~~G~~v~~v~~~--~------~l~~~DglIipG 45 (184)
|||.|+.. .||-..+. +.+++.|+++..+.-. + ++.++|+|||..
T Consensus 257 ~kv~iiy~S~~GnT~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~l~~~D~iiigs 315 (414)
T 2q9u_A 257 KKVTVVLDSMYGTTHRMALALLDGARSTGCETVLLEMTSSDITKVALHTYDSGAVAFAS 315 (414)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGGCCHHHHHHHHHTCSEEEEEC
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEEcCcCCHHHHHHHHHhCCEEEEEc
Confidence 57777654 45544444 3455578887776421 1 466899999965
No 155
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=45.60 E-value=27 Score=25.89 Aligned_cols=70 Identities=10% Similarity=0.109 Sum_probs=41.4
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKP 73 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~P 73 (184)
|||.|+.-.-.+.+ +...|++.|+++..+.+.++ + ..+|.+|+|+..+.. +.+.|++. ....|
T Consensus 1 m~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvilp~~~g~~---------~~~~lr~~-~~~~~ 70 (223)
T 2hqr_A 1 MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVSDKNALS---------FVSRIKEK-HSSIV 70 (223)
T ss_dssp CCEEEECSCHHHHHHHHHHHGGGTCCEEEESSHHHHHHHHTTSCCSEEEECCTTHHH---------HHHHHHHH-CTTSE
T ss_pred CEEEEEcCCHHHHHHHHHHHHHCCcEEEEECCHHHHHHHHhcCCCCEEEeCCCCHHH---------HHHHHHhC-CCCCc
Confidence 67666554444444 44677888998887665422 1 358988866533211 34455554 22688
Q ss_pred EEEEchH
Q 030035 74 VWGTCAG 80 (184)
Q Consensus 74 vlGIC~G 80 (184)
++-+..-
T Consensus 71 ii~lt~~ 77 (223)
T 2hqr_A 71 VLVSSDN 77 (223)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 8877643
No 156
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=45.57 E-value=77 Score=25.00 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=37.2
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CC--CCEEEEcCCchhHHHHHHhcCCh
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QN--VSSLIIPGGESTTMARLAEYHNL 60 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~--~DglIipGG~~~~~~~l~~~~~l 60 (184)
+||++.-.- + | .+ +.+.+++.|+++.+.....+ + .+ +|+||+.+......
T Consensus 7 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~--------- 77 (332)
T 2rjo_A 7 TLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADA--------- 77 (332)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCSSHHHH---------
T ss_pred EEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHH---------
Confidence 688876422 2 2 22 33456778998887753221 1 36 99999976543221
Q ss_pred HHHHHHHHHcCCcEEEE
Q 030035 61 FPALREFVKMGKPVWGT 77 (184)
Q Consensus 61 ~~~l~~~~~~g~PvlGI 77 (184)
.+.++++.+.++|+..+
T Consensus 78 ~~~~~~~~~~~iPvV~~ 94 (332)
T 2rjo_A 78 RVIVEACSKAGAYVTTI 94 (332)
T ss_dssp HHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEE
Confidence 12233333457787655
No 157
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=45.25 E-value=19 Score=25.41 Aligned_cols=45 Identities=9% Similarity=0.100 Sum_probs=29.5
Q ss_pred CEEEEEec--CCCHHHHHHH----HHHCCCeEEEEcC--CCCCCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHIAA----LKRLGVKGVEIRK--PDQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~----L~~~G~~v~~v~~--~~~l~~~DglIipG 45 (184)
|||.|+.. .||-..+.+. +...|+++..+.. ..++.++|.+|+..
T Consensus 2 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~l~~~d~vi~g~ 54 (147)
T 2hna_A 2 ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVIS 54 (147)
T ss_dssp CSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEECCTTSCSSCSEEEEEEEC
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEecCCCHHHcccCCeEEEEE
Confidence 37777754 5776555544 5556888877753 45577889888843
No 158
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=45.15 E-value=22 Score=28.48 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=29.9
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcC----------------CCCCCCCCEEEEc
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRK----------------PDQLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~----------------~~~l~~~DglIip 44 (184)
|||.|+.-.....+..+.|++.|.++..... .+.+.++|+++.+
T Consensus 6 m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~ 65 (293)
T 3d4o_A 6 KHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLP 65 (293)
T ss_dssp CEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEec
Confidence 7887775444445567889999998876532 1224578999985
No 159
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=44.31 E-value=87 Score=23.87 Aligned_cols=51 Identities=6% Similarity=-0.015 Sum_probs=30.8
Q ss_pred HHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEE
Q 030035 16 IAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 16 ~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGI 77 (184)
.+.+++.|+++.+.....+ + .++||+|+.+..... +.++.+.+.++|+.-+
T Consensus 36 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~-----------~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 36 SSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND-----------RIIQYLHEQNFPFVLI 98 (292)
T ss_dssp HHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC-----------HHHHHHHHTTCCEEEE
T ss_pred HHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh-----------HHHHHHHHCCCCEEEE
Confidence 3557778999887753311 1 479999997754221 2233334567887654
No 160
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=43.61 E-value=1.1e+02 Score=23.69 Aligned_cols=67 Identities=24% Similarity=0.393 Sum_probs=37.8
Q ss_pred EEEEEecC-CCHHH-----HHHHHHHCCCeEEEEc-CCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ-GSFNE-----HIAALKRLGVKGVEIR-KPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q-G~~~~-----~~~~L~~~G~~v~~v~-~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+||++.-. ++|.. ..+++++.|+++.+.. ...+ + .++|+||+.+..... ..+
T Consensus 3 ~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~---------~~~ 73 (313)
T 2h3h_A 3 TIGVIGKSVHPYWSQVEQGVKAAGKALGVDTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTA---------VIP 73 (313)
T ss_dssp EEEEECSCSSHHHHHHHHHHHHHHHHHTCEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTT---------THH
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHH---------HHH
Confidence 78887532 22322 2345667899988764 2211 1 479999997643322 123
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++++.+.++|+..+
T Consensus 74 ~~~~~~~~~iPvV~~ 88 (313)
T 2h3h_A 74 TIKKALEMGIPVVTL 88 (313)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 344444568888765
No 161
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=43.40 E-value=38 Score=24.95 Aligned_cols=44 Identities=11% Similarity=0.000 Sum_probs=27.4
Q ss_pred CEEEEEec--CCCHHHHH----HHHHH-CCCeEEEEcCC----CCCCCCCEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHI----AALKR-LGVKGVEIRKP----DQLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~----~~L~~-~G~~v~~v~~~----~~l~~~DglIip 44 (184)
|||.|+.. .||-..+. +.+++ .|+++.+++-. +++.++|+||+.
T Consensus 5 ~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~~~~~l~~aD~ii~g 59 (188)
T 2ark_A 5 GKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVG 59 (188)
T ss_dssp EEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEE
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhCCHHHHHhCCEEEEE
Confidence 37888764 34443333 44565 67787777532 235689999994
No 162
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=42.97 E-value=90 Score=25.44 Aligned_cols=28 Identities=21% Similarity=0.206 Sum_probs=19.3
Q ss_pred CEEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |.+.. +.+.|++. +++++-+
T Consensus 28 ~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av 58 (350)
T 3rc1_A 28 IRVGVIGC-ADIAWRRALPALEAEPLTEVTAI 58 (350)
T ss_dssp EEEEEESC-CHHHHHTHHHHHHHCTTEEEEEE
T ss_pred eEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEE
Confidence 47898775 66654 67888776 6676544
No 163
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=42.56 E-value=38 Score=26.50 Aligned_cols=45 Identities=22% Similarity=0.166 Sum_probs=32.9
Q ss_pred CEEEEEecCCCHHHH-HHHHHHCCCeEEEE-cCC------------CCCCCCCEEEEcC
Q 030035 1 MVVGVLALQGSFNEH-IAALKRLGVKGVEI-RKP------------DQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~qG~~~~~-~~~L~~~G~~v~~v-~~~------------~~l~~~DglIipG 45 (184)
|||.|..-.|-+.++ ++.|.+.|.+|+.+ +++ +.++++|.+|=.-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEec
Confidence 998887767777775 48899999998876 322 2367889887543
No 164
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=42.20 E-value=10 Score=27.52 Aligned_cols=45 Identities=16% Similarity=0.121 Sum_probs=28.0
Q ss_pred CEEEEEec--CCCHHHHHHHHHH-CCC--eEEEEc----CCCCCCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHIAALKR-LGV--KGVEIR----KPDQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~-~G~--~v~~v~----~~~~l~~~DglIipG 45 (184)
|||.|+.. .||-..+.+.+.+ ++. ++.++. +.+++.++|.||+.-
T Consensus 1 ~kilIvY~S~tGnT~~vA~~ia~~l~~~~~v~~~~~~~~~~~~l~~~d~ii~g~ 54 (169)
T 1czn_A 1 AKIGLFYGTQTGVTQTIAESIQQEFGGESIVDLNDIANADASDLNAYDYLIIGC 54 (169)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTSTTTEEEEEGGGCCGGGGGGCSEEEEEC
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHhCcccceEEEEhhhCCHhHHhhCCEEEEEe
Confidence 67888754 5777767766544 332 344443 234577899999843
No 165
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=42.01 E-value=48 Score=24.67 Aligned_cols=30 Identities=10% Similarity=0.098 Sum_probs=18.7
Q ss_pred CEEEEEecC--CCHHHHH----HHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQ--GSFNEHI----AALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~q--G~~~~~~----~~L~~~G~~v~~v~ 30 (184)
|||.|+... |+-..+. +.+++.|+++.+++
T Consensus 7 mkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~ 42 (211)
T 1ydg_A 7 VKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLK 42 (211)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEe
Confidence 588887653 5433333 44566788887765
No 166
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=41.96 E-value=1.2e+02 Score=23.72 Aligned_cols=67 Identities=19% Similarity=0.227 Sum_probs=36.4
Q ss_pred EEEEEecC-CC-HH-H----HHHHHHHCCCeEEEEc-CCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 2 VVGVLALQ-GS-FN-E----HIAALKRLGVKGVEIR-KPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 2 ~IgVl~~q-G~-~~-~----~~~~L~~~G~~v~~v~-~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
+||++.-. ++ |. . +.+++++.|+++.+.. ...+ + .++|+||+.+..+.. +.
T Consensus 5 ~Igvi~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~---------~~ 75 (316)
T 1tjy_A 5 RIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDG---------LC 75 (316)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSST---------TH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHH---------HH
Confidence 68887532 22 22 2 3345677899888753 2211 1 478999997643221 12
Q ss_pred HHHHHHHHcCCcEEEE
Q 030035 62 PALREFVKMGKPVWGT 77 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGI 77 (184)
+.++++.+.|+|+..+
T Consensus 76 ~~~~~a~~~gipvV~~ 91 (316)
T 1tjy_A 76 PALKRAMQRGVKILTW 91 (316)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCcCEEEEe
Confidence 2344444557776543
No 167
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=41.83 E-value=50 Score=24.72 Aligned_cols=37 Identities=16% Similarity=0.096 Sum_probs=24.2
Q ss_pred HHHHHHHHH----HCCCeEEEEcCCCC------C----CCCCEEEE-cCCch
Q 030035 12 FNEHIAALK----RLGVKGVEIRKPDQ------L----QNVSSLII-PGGES 48 (184)
Q Consensus 12 ~~~~~~~L~----~~G~~v~~v~~~~~------l----~~~DglIi-pGG~~ 48 (184)
+.++.+.++ +.|+++....+..+ + .++|++|| ||++.
T Consensus 33 l~di~~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~T 84 (156)
T 1gtz_A 33 LADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYS 84 (156)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHHHHHCSEEEEECTTHH
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhc
Confidence 555555554 46888888765421 1 35899999 88864
No 168
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=41.82 E-value=41 Score=24.37 Aligned_cols=28 Identities=21% Similarity=0.135 Sum_probs=18.7
Q ss_pred EEEEEec--CCCHHHHHHHHHH-CCCeEEEE
Q 030035 2 VVGVLAL--QGSFNEHIAALKR-LGVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~--qG~~~~~~~~L~~-~G~~v~~v 29 (184)
||.|+.+ .||-..+.+.+.+ .|.++..+
T Consensus 6 kilIvY~S~tG~T~~vA~~Ia~~l~~~~~~i 36 (162)
T 3klb_A 6 KILVAYFSCSGVTKAVAEKLAAITGADLYEI 36 (162)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHTCEEEEC
T ss_pred CEEEEEECCCchHHHHHHHHHHHhCCCeEEE
Confidence 7888765 5777777776644 57766544
No 169
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=41.73 E-value=23 Score=29.23 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHcCCcEEEEchHHHHHHHhhhc
Q 030035 59 NLFPALREFVKMGKPVWGTCAGLIFLANKAVG 90 (184)
Q Consensus 59 ~l~~~l~~~~~~g~PvlGIC~G~QlLa~~~~~ 90 (184)
.+.+.|++.+++|+||+|.++|-=|-|+..+.
T Consensus 15 ~il~~l~~~i~~~~~iig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 15 ELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceEEEecccchhhHHHHh
Confidence 36777888889999999999999999998763
No 170
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=40.91 E-value=15 Score=27.32 Aligned_cols=49 Identities=14% Similarity=0.287 Sum_probs=28.2
Q ss_pred CEEEEEec-----CC-----CHHHHHHH----HHHCCCeEEE---EcCC-CC--------CC-CCCEEEEcCCchh
Q 030035 1 MVVGVLAL-----QG-----SFNEHIAA----LKRLGVKGVE---IRKP-DQ--------LQ-NVSSLIIPGGEST 49 (184)
Q Consensus 1 m~IgVl~~-----qG-----~~~~~~~~----L~~~G~~v~~---v~~~-~~--------l~-~~DglIipGG~~~ 49 (184)
||++|+.. .| |-.-+.+. |++.|+++.. +.+. +. ++ ++|.||.+||.+.
T Consensus 6 ~~v~Ii~~GdEl~~G~i~D~n~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~ 81 (167)
T 2g2c_A 6 IKSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISEVVVPEGYDTVVEAIATALKQGARFIITAGGTGI 81 (167)
T ss_dssp EEEEEEEECHHHHHTSSCCCHHHHHHHHHCC----CEEEEEEEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred cEEEEEEECCcccCCceeccHHHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 47888873 33 22335577 8889987754 3332 11 23 4999999998643
No 171
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=40.86 E-value=53 Score=26.02 Aligned_cols=60 Identities=17% Similarity=0.090 Sum_probs=34.8
Q ss_pred ecCCCHHHHHHHHHHCCC-eEEEEcCCCC----CCCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEchH
Q 030035 7 ALQGSFNEHIAALKRLGV-KGVEIRKPDQ----LQNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCAG 80 (184)
Q Consensus 7 ~~qG~~~~~~~~L~~~G~-~v~~v~~~~~----l~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~G 80 (184)
+-.|...++.+.+++.|. .+.+....++ +..+|.+|+|+| +.+ +.++...|+|++++-.|
T Consensus 219 ~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg-~~~-------------~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 219 SGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSG-ALT-------------VSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp CCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCC-HHH-------------HHHHHHHTCCEEECCCC
T ss_pred cCCchHHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCc-hHH-------------HHHHHHhCCCEEEeeCC
Confidence 344555555555666653 3444433333 246899999876 211 23444569999998654
No 172
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=40.26 E-value=1.1e+02 Score=22.68 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=37.8
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCC-C---eEEEEcCC--CC-------C---CCCCEEEEcC----CchhHHHH
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLG-V---KGVEIRKP--DQ-------L---QNVSSLIIPG----GESTTMAR 53 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G-~---~v~~v~~~--~~-------l---~~~DglIipG----G~~~~~~~ 53 (184)
+||||+.-.-|-. .-.+.|++.| + ++.+++-| -+ + .+||++|--| |+..-++.
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~ 92 (156)
T 3nq4_A 13 ARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEY 92 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHHHCSCSEEEEEEEEECCSSTHHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHH
Confidence 4678776554422 2345677888 5 34444322 11 1 4699988877 43333333
Q ss_pred HHhcCChHHHHHHHHHcCCcE
Q 030035 54 LAEYHNLFPALREFVKMGKPV 74 (184)
Q Consensus 54 l~~~~~l~~~l~~~~~~g~Pv 74 (184)
.... -.....+--++.++||
T Consensus 93 Va~~-v~~Gl~~v~L~~~vPV 112 (156)
T 3nq4_A 93 VAGG-ASNGLASVAQDSGVPV 112 (156)
T ss_dssp HHHH-HHHHHHHHHHHHCCCE
T ss_pred HHHH-HHHHHHHHHhccCCCE
Confidence 3332 1122333344568997
No 173
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=40.20 E-value=71 Score=25.71 Aligned_cols=28 Identities=14% Similarity=0.215 Sum_probs=18.4
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |++. .+.+.|++. +++++-+
T Consensus 6 ~rigiiG~-G~ig~~~~~~l~~~~~~~~~av 35 (329)
T 3evn_A 6 VRYGVVST-AKVAPRFIEGVRLAGNGEVVAV 35 (329)
T ss_dssp EEEEEEBC-CTTHHHHHHHHHHHCSEEEEEE
T ss_pred eEEEEEec-hHHHHHHHHHHHhCCCcEEEEE
Confidence 37999887 6654 467777765 4555544
No 174
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=39.83 E-value=4.4 Score=30.65 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=18.1
Q ss_pred CEEEEEecC----CCHHHHH----HH-HHHCCCeEEEEc
Q 030035 1 MVVGVLALQ----GSFNEHI----AA-LKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~q----G~~~~~~----~~-L~~~G~~v~~v~ 30 (184)
|||.|+... |+-..+. +. +++.|.++.++.
T Consensus 3 mkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~d 41 (197)
T 2vzf_A 3 YSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIH 41 (197)
T ss_dssp EEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEE
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 488887654 4433333 44 555688877764
No 175
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=39.81 E-value=29 Score=26.03 Aligned_cols=49 Identities=24% Similarity=0.291 Sum_probs=29.6
Q ss_pred CEEEEEec-----CCC-----HHHHHHHHH---HCCCeEEE--EcCC-CC--------CC--CCCEEEEcCCchh
Q 030035 1 MVVGVLAL-----QGS-----FNEHIAALK---RLGVKGVE--IRKP-DQ--------LQ--NVSSLIIPGGEST 49 (184)
Q Consensus 1 m~IgVl~~-----qG~-----~~~~~~~L~---~~G~~v~~--v~~~-~~--------l~--~~DglIipGG~~~ 49 (184)
|||+|+.. .|. -.-+.+.|+ +.|+++.. +.+. +. ++ ++|.||.+||.+.
T Consensus 6 ~rv~IistGdE~~~G~i~Dsn~~~l~~~l~~l~~~G~~v~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 6 AVIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp CEEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CEEEEEEeCCcCCCCCeecchHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 58898874 232 122446677 78988732 2222 11 23 6999999998643
No 176
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=39.79 E-value=53 Score=26.66 Aligned_cols=46 Identities=20% Similarity=0.332 Sum_probs=29.1
Q ss_pred CEEEEEecCCCHHH-HHHHHHHC-CCeEEEE--cC--------------CCCC-CCCCEEEEcCCc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRL-GVKGVEI--RK--------------PDQL-QNVSSLIIPGGE 47 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~-G~~v~~v--~~--------------~~~l-~~~DglIipGG~ 47 (184)
|||||+.. |+... +.+.+.+. +.+++.+ ++ .+++ .++|.+++.-..
T Consensus 4 irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~ 68 (320)
T 1f06_A 4 IRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGS 68 (320)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCT
T ss_pred CEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCc
Confidence 47999886 88765 66777665 5555433 11 1222 578999997653
No 177
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=39.48 E-value=1.2e+02 Score=22.91 Aligned_cols=65 Identities=18% Similarity=0.276 Sum_probs=37.5
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-.- + | .+ +.+.+++.|+++.+.....+ + .++||+|+.+.... +
T Consensus 9 ~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~------------~ 76 (276)
T 3jy6_A 9 LIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSNP------------Q 76 (276)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCCH------------H
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCcH------------H
Confidence 588876322 1 2 22 33556778999888754321 1 47999999875431 1
Q ss_pred HHHHHHHcCCcEEEEc
Q 030035 63 ALREFVKMGKPVWGTC 78 (184)
Q Consensus 63 ~l~~~~~~g~PvlGIC 78 (184)
.++.+.+.++|+.-+.
T Consensus 77 ~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 77 TVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHTTSSCEEEES
T ss_pred HHHHHHHCCCCEEEEe
Confidence 2233334577876554
No 178
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=38.77 E-value=1.1e+02 Score=22.88 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=24.6
Q ss_pred HHHHHHHH----HHCCCeEEEEcCCC----------CCCCCCEEEE-cCCch
Q 030035 12 FNEHIAAL----KRLGVKGVEIRKPD----------QLQNVSSLII-PGGES 48 (184)
Q Consensus 12 ~~~~~~~L----~~~G~~v~~v~~~~----------~l~~~DglIi-pGG~~ 48 (184)
+.++.+.+ ++.|+++....+.. ...++|++|| ||++.
T Consensus 28 l~di~~~l~~~a~~~g~~l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~T 79 (154)
T 1uqr_A 28 LSDIEQHLQQSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIIINPGAFT 79 (154)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhc
Confidence 55555554 44789988876431 1246999999 88864
No 179
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=38.19 E-value=8.4 Score=28.46 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=27.7
Q ss_pred CEEEEEec--CCCHHHHHHHHHH-CCC-eEEEE--cC--CCCCCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHIAALKR-LGV-KGVEI--RK--PDQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~-~G~-~v~~v--~~--~~~l~~~DglIipG 45 (184)
|||.|+.. .||-..+.+.+.+ ++. .+.++ .. ..++.++|.||+.-
T Consensus 1 Mki~IvY~S~tGnT~~iA~~Ia~~l~~~~v~i~~~~~~~~~~l~~~d~ii~g~ 53 (175)
T 1ag9_A 1 AITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGI 53 (175)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHCTTTEEEEEGGGCCHHHHHTCSEEEEEC
T ss_pred CEEEEEEECCCchHHHHHHHHHHHhccCceEEEEcccCChhHhhhCCEEEEEE
Confidence 88888764 5777777766654 332 23333 22 23467899998843
No 180
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=37.98 E-value=63 Score=26.06 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=19.2
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |... .|.+.|++. +++++.+
T Consensus 6 ~~igiiG~-G~~g~~~~~~l~~~~~~~l~av 35 (330)
T 3e9m_A 6 IRYGIMST-AQIVPRFVAGLRESAQAEVRGI 35 (330)
T ss_dssp EEEEECSC-CTTHHHHHHHHHHSSSEEEEEE
T ss_pred EEEEEECc-hHHHHHHHHHHHhCCCcEEEEE
Confidence 37998876 6654 477888874 6666644
No 181
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=37.98 E-value=1.5e+02 Score=23.61 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=19.3
Q ss_pred CEEEEEecCCCHH--HHHHHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSFN--EHIAALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~--~~~~~L~~~G~~v~~v 29 (184)
|||||+.. |... .+.+.|+..+++++-+
T Consensus 5 ~rvgiiG~-G~~~~~~~~~~l~~~~~~lvav 34 (336)
T 2p2s_A 5 IRFAAIGL-AHNHIYDMCQQLIDAGAELAGV 34 (336)
T ss_dssp CEEEEECC-SSTHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEECC-ChHHHHHhhhhhcCCCcEEEEE
Confidence 58999876 4443 3667777778887655
No 182
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=37.95 E-value=1.3e+02 Score=22.91 Aligned_cols=67 Identities=16% Similarity=0.275 Sum_probs=36.0
Q ss_pred EEEEEecC-CC-H-HH----HHHHHHHCCCeEEEEc-CCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChH
Q 030035 2 VVGVLALQ-GS-F-NE----HIAALKRLGVKGVEIR-KPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLF 61 (184)
Q Consensus 2 ~IgVl~~q-G~-~-~~----~~~~L~~~G~~v~~v~-~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~ 61 (184)
+||++.-. ++ | .+ ..+++++.|+++.++. ...+ + .++|+||+.+...... .
T Consensus 6 ~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~~~~~---------~ 76 (303)
T 3d02_A 6 TVVNISKVDGMPWFNRMGEGVVQAGKEFNLNASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVL---------E 76 (303)
T ss_dssp EEEEECSCSSCHHHHHHHHHHHHHHHHTTEEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSCHHHH---------H
T ss_pred EEEEEeccCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHH---------H
Confidence 68887632 22 2 22 3345677898887543 2111 1 4789999976533221 1
Q ss_pred HHHHHHHHcCCcEEEE
Q 030035 62 PALREFVKMGKPVWGT 77 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGI 77 (184)
+.++++.+.++|+.-+
T Consensus 77 ~~~~~~~~~~ipvV~~ 92 (303)
T 3d02_A 77 PVFKKARDAGIVVLTN 92 (303)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCeEEEE
Confidence 2233444456776554
No 183
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=37.91 E-value=1.3e+02 Score=23.06 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=36.2
Q ss_pred EEEEEecC--CCH-HHH----HHHHHHCCCeEEEEc--CCCC-------C-----CCCCEEEEcCCchhHHHHHHhcCCh
Q 030035 2 VVGVLALQ--GSF-NEH----IAALKRLGVKGVEIR--KPDQ-------L-----QNVSSLIIPGGESTTMARLAEYHNL 60 (184)
Q Consensus 2 ~IgVl~~q--G~~-~~~----~~~L~~~G~~v~~v~--~~~~-------l-----~~~DglIipGG~~~~~~~l~~~~~l 60 (184)
+|||+.-. ..| .++ .+.+++.|+++.+.. ...+ + ..+||||+.+..... .
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~---------~ 73 (288)
T 1gud_A 3 EYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVN---------L 73 (288)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSST---------T
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHH---------H
Confidence 68887632 222 222 345667899887765 3211 1 368999997643221 1
Q ss_pred HHHHHHHHHcCCcEEEE
Q 030035 61 FPALREFVKMGKPVWGT 77 (184)
Q Consensus 61 ~~~l~~~~~~g~PvlGI 77 (184)
.+.++++.+.++|+.-+
T Consensus 74 ~~~~~~~~~~~iPvV~~ 90 (288)
T 1gud_A 74 VMPVARAWKKGIYLVNL 90 (288)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEE
Confidence 12233444457776654
No 184
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=37.88 E-value=1.4e+02 Score=23.07 Aligned_cols=66 Identities=12% Similarity=0.144 Sum_probs=37.8
Q ss_pred EEEEEecCC--C-HHH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQG--S-FNE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG--~-~~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+|||+.-.- . +.+ +.+.+++.|+++.+.....+ + ..+||||+.+..... . +
T Consensus 17 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~---------~ 86 (303)
T 3kke_A 17 TIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFD-D---------D 86 (303)
T ss_dssp CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCC-H---------H
T ss_pred EEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCc-H---------H
Confidence 478875322 2 233 33556778999887753321 1 479999998753221 0 1
Q ss_pred HHHHHHHcCCcEEEEc
Q 030035 63 ALREFVKMGKPVWGTC 78 (184)
Q Consensus 63 ~l~~~~~~g~PvlGIC 78 (184)
.++++.+ ++|+.-+.
T Consensus 87 ~~~~l~~-~iPvV~i~ 101 (303)
T 3kke_A 87 MLAAVLE-GVPAVTIN 101 (303)
T ss_dssp HHHHHHT-TSCEEEES
T ss_pred HHHHHhC-CCCEEEEC
Confidence 3344445 78877653
No 185
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=37.56 E-value=79 Score=24.09 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=27.6
Q ss_pred EEEEEecC-C--C-H-HH----HHHHHHHCCCeEEEEcC--CCC----------C--CCCCEEEEcCCc
Q 030035 2 VVGVLALQ-G--S-F-NE----HIAALKRLGVKGVEIRK--PDQ----------L--QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~q-G--~-~-~~----~~~~L~~~G~~v~~v~~--~~~----------l--~~~DglIipGG~ 47 (184)
+||++.-. + + | .+ ..+.+++.|+++.+... ..+ + .++|+||+.+..
T Consensus 7 ~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~ 75 (289)
T 3brs_A 7 YMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAAD 75 (289)
T ss_dssp EEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSC
T ss_pred EEEEEeCCCCCCchHHHHHHHHHHHHHHHcCCEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 58887542 2 2 2 22 23456678999887643 111 1 479999997653
No 186
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=37.54 E-value=63 Score=24.70 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=31.0
Q ss_pred EEEEEecCCCHH--HHHHHHHHCCCeEEEEcCCC----------CCCCCCEEEEcC
Q 030035 2 VVGVLALQGSFN--EHIAALKRLGVKGVEIRKPD----------QLQNVSSLIIPG 45 (184)
Q Consensus 2 ~IgVl~~qG~~~--~~~~~L~~~G~~v~~v~~~~----------~l~~~DglIipG 45 (184)
.|+||.-..+.. .+.+++++.|+++..+...+ ++.++|.++++.
T Consensus 1 mI~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 1 MLAILYDRIRPDERMLFERAEALGLPYKKVYVPALPMVLGERPKELEGVTVALERC 56 (280)
T ss_dssp CEEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCCEETTBCCGGGTTCCEEEECC
T ss_pred CEEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhceeeccCCCcccCCCCEEEECC
Confidence 188988766554 46789999999998875321 134788777875
No 187
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=37.25 E-value=74 Score=25.38 Aligned_cols=28 Identities=18% Similarity=0.276 Sum_probs=19.2
Q ss_pred CEEEEEecCCCHHH--HHHHHHH-CCCeEEEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKR-LGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~-~G~~v~~v 29 (184)
|||||+.. |.... +.+.|.+ .+++++.+
T Consensus 6 ~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav 36 (319)
T 1tlt_A 6 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGA 36 (319)
T ss_dssp EEEEEECC-STHHHHTHHHHHHSCSSEEEEEE
T ss_pred ceEEEECC-CHHHHHHHHHHHHhCCCeEEEEE
Confidence 47999887 87764 6677766 46666633
No 188
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=37.15 E-value=47 Score=29.11 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=44.4
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcC----------------------CCCC-CCCCEEEEcCCchhH---HHH
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRK----------------------PDQL-QNVSSLIIPGGESTT---MAR 53 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~----------------------~~~l-~~~DglIipGG~~~~---~~~ 53 (184)
+||-++.+.|.-.+ +.+.|.+.|++|..... ++.+ .++|.+|++-|-+.. +..
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~l~~ 99 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDVIEY 99 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHHHHH
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHHHHH
Confidence 46777777776655 56777888887766531 1223 468999986663221 222
Q ss_pred HHhc----CChHHHHHHHHHcCCcEEEEch
Q 030035 54 LAEY----HNLFPALREFVKMGKPVWGTCA 79 (184)
Q Consensus 54 l~~~----~~l~~~l~~~~~~g~PvlGIC~ 79 (184)
..+. -+-.+++.++...++|++||..
T Consensus 100 a~~~gi~v~~~~e~l~~~~~~~~~vIaVTG 129 (524)
T 3hn7_A 100 MLDTGLRYTSGPQFLSEQVLQSRHVIAVAG 129 (524)
T ss_dssp HHHHTCCEEEHHHHHHHHTGGGSEEEEEEC
T ss_pred HHHCCCcEEEHHHHHHHHHhccCcEEEEEC
Confidence 2221 0113444443334678888883
No 189
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=36.97 E-value=48 Score=27.25 Aligned_cols=27 Identities=19% Similarity=0.400 Sum_probs=18.4
Q ss_pred EEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 2 VVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
||||+.. |.+.. +.+.|.+. +++++-+
T Consensus 7 rigiIG~-G~~g~~~~~~~l~~~~~~~l~av 36 (359)
T 3m2t_A 7 KVGLVGI-GAQMQENLLPSLLQMQDIRIVAA 36 (359)
T ss_dssp EEEEECC-SHHHHHTHHHHHHTCTTEEEEEE
T ss_pred eEEEECC-CHHHHHHHHHHHHhCCCcEEEEE
Confidence 7898775 66543 67888776 6776644
No 190
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=36.93 E-value=87 Score=25.57 Aligned_cols=27 Identities=30% Similarity=0.305 Sum_probs=18.3
Q ss_pred EEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 2 VVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
||||+.. |.+.. |.+.+++. +++++-+
T Consensus 7 rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av 36 (358)
T 3gdo_A 7 KVGILGY-GLSGSVFHGPLLDVLDEYQISKI 36 (358)
T ss_dssp EEEEECC-SHHHHHTTHHHHTTCTTEEEEEE
T ss_pred eEEEEcc-CHHHHHHHHHHHhhCCCeEEEEE
Confidence 7898876 66654 56777665 6666544
No 191
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=36.93 E-value=1.3e+02 Score=23.10 Aligned_cols=45 Identities=20% Similarity=0.228 Sum_probs=27.6
Q ss_pred EEEEEecCCC---HHH----HHHHHHHCCCeEEEEcCCCC---------C--CCCCEEEEcCCc
Q 030035 2 VVGVLALQGS---FNE----HIAALKRLGVKGVEIRKPDQ---------L--QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~qG~---~~~----~~~~L~~~G~~v~~v~~~~~---------l--~~~DglIipGG~ 47 (184)
+|||+. .-+ +.+ +.+.+++.|+++.+.....+ + .++||||+.+..
T Consensus 14 ~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 76 (289)
T 3k9c_A 14 LLGVVF-ELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTR 76 (289)
T ss_dssp EEEEEE-ETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCC
T ss_pred EEEEEE-ecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 588877 322 222 33556778998887642211 1 478999998753
No 192
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=36.89 E-value=1e+02 Score=23.52 Aligned_cols=46 Identities=22% Similarity=0.338 Sum_probs=29.0
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCc
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~ 47 (184)
+|||+.-.- + | .+ +.+.+++.|+++.+.....+ + ..+||||+.+..
T Consensus 10 ~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 74 (291)
T 3egc_A 10 VVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSE 74 (291)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCS
T ss_pred EEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 688876322 2 2 22 34567778999888754321 1 479999997753
No 193
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=36.56 E-value=39 Score=27.57 Aligned_cols=28 Identities=21% Similarity=0.237 Sum_probs=19.3
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |+.. .|.+.|++. +++++.+
T Consensus 6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav 35 (354)
T 3db2_A 6 VGVAAIGL-GRWAYVMADAYTKSEKLKLVTC 35 (354)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTCSSEEEEEE
T ss_pred ceEEEEcc-CHHHHHHHHHHHhCCCcEEEEE
Confidence 37999876 6554 377888776 7776644
No 194
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=35.90 E-value=1.5e+02 Score=22.74 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=27.6
Q ss_pred EEEEEecC--CCH-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCC
Q 030035 2 VVGVLALQ--GSF-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~q--G~~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG 46 (184)
+|||+.-. ..| .+ +.+.+++.|+++.+.....+ + .++||||+.+.
T Consensus 18 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 81 (289)
T 2fep_A 18 TVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGG 81 (289)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 68887642 222 22 33556778998877643221 1 47999999764
No 195
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=35.71 E-value=83 Score=26.14 Aligned_cols=49 Identities=22% Similarity=0.524 Sum_probs=32.3
Q ss_pred EEEEEecCCCH----------HHHHHHHHHCCCeEEEEcCC---------------CCC------CCCCEEEEc-CCchh
Q 030035 2 VVGVLALQGSF----------NEHIAALKRLGVKGVEIRKP---------------DQL------QNVSSLIIP-GGEST 49 (184)
Q Consensus 2 ~IgVl~~qG~~----------~~~~~~L~~~G~~v~~v~~~---------------~~l------~~~DglIip-GG~~~ 49 (184)
+|||++-.+.. ..-++.|++.|.+++.-... ++| ++.|+|+.. ||+..
T Consensus 7 ~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 86 (346)
T 4eys_A 7 TIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNPIFLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAIGGDDT 86 (346)
T ss_dssp EEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEEEECTTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECCCCSCG
T ss_pred EEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEEEECCchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEcccccCH
Confidence 79999876643 22346788899999986421 122 467898885 56654
Q ss_pred H
Q 030035 50 T 50 (184)
Q Consensus 50 ~ 50 (184)
.
T Consensus 87 ~ 87 (346)
T 4eys_A 87 Y 87 (346)
T ss_dssp G
T ss_pred H
Confidence 3
No 196
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=35.68 E-value=1.4e+02 Score=22.30 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=38.7
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCCC---eEEEEcCCCC--------CCCCCEEEEcC----CchhHHHHHHhcC
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLGV---KGVEIRKPDQ--------LQNVSSLIIPG----GESTTMARLAEYH 58 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G~---~v~~v~~~~~--------l~~~DglIipG----G~~~~~~~l~~~~ 58 (184)
+||||+.-.-|-. .-.+.|++.|+ ++..|.-.-+ .++||++|--| |+..-++.....
T Consensus 18 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~~yDavIaLG~VIrG~T~Hfd~Va~~- 96 (160)
T 2c92_A 18 VRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDA- 96 (160)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHTSCSEEEEEEEEECCSSTHHHHHHHH-
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHhcCCEEEEEeeeecCCchHHHHHHHH-
Confidence 3688877554422 12355777886 3444432211 13699988877 433333333332
Q ss_pred ChHHHHHHHHHcCCcE-EE
Q 030035 59 NLFPALREFVKMGKPV-WG 76 (184)
Q Consensus 59 ~l~~~l~~~~~~g~Pv-lG 76 (184)
-.....+--++.++|| +|
T Consensus 97 vs~Gl~~v~L~~~vPV~~G 115 (160)
T 2c92_A 97 VTQGLTRVSLDSSTPIANG 115 (160)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhhcCCCEEEE
Confidence 1122334444678997 45
No 197
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=35.32 E-value=88 Score=25.39 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=19.1
Q ss_pred CEEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |.... |.+.+++. +++++-+
T Consensus 8 ~rvgiiG~-G~~g~~~~~~~~~~~~~~~l~av 38 (352)
T 3kux_A 8 IKVGLLGY-GYASKTFHAPLIMGTPGLELAGV 38 (352)
T ss_dssp EEEEEECC-SHHHHHTHHHHHHTSTTEEEEEE
T ss_pred ceEEEECC-CHHHHHHHHHHHhhCCCcEEEEE
Confidence 37898876 66654 67778776 6676644
No 198
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=35.01 E-value=46 Score=27.78 Aligned_cols=21 Identities=24% Similarity=0.518 Sum_probs=13.3
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL 22 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~ 22 (184)
|||||+.. |... .|.+++++.
T Consensus 27 lrvgiIG~-G~ig~~h~~~~~~~ 48 (412)
T 4gqa_A 27 LNIGLIGS-GFMGQAHADAYRRA 48 (412)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHH
T ss_pred ceEEEEcC-cHHHHHHHHHHHhc
Confidence 47888875 5443 366777654
No 199
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=34.87 E-value=1e+02 Score=20.76 Aligned_cols=70 Identities=20% Similarity=0.214 Sum_probs=36.6
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEE----cCCchhHHHHHHhcCChHHHHHHHHH
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLII----PGGESTTMARLAEYHNLFPALREFVK 69 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIi----pGG~~~~~~~l~~~~~l~~~l~~~~~ 69 (184)
|||.|+.-.-.+.+ +.+.|++.|.++..+.+.++ + ..+|.+++ ||..+.. +.+.|++...
T Consensus 15 ~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~---------~~~~lr~~~~ 85 (143)
T 3m6m_D 15 MRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLD---------MLKQLRVMQA 85 (143)
T ss_dssp CEEEEECSSHHHHHHHHHHHHC--CEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHH---------HHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHH---------HHHHHHhchh
Confidence 35555443333444 44668888988887765432 1 36898888 5533221 3344554322
Q ss_pred ---cCCcEEEEch
Q 030035 70 ---MGKPVWGTCA 79 (184)
Q Consensus 70 ---~g~PvlGIC~ 79 (184)
...|++-+-.
T Consensus 86 ~~~~~~pii~~s~ 98 (143)
T 3m6m_D 86 SGMRYTPVVVLSA 98 (143)
T ss_dssp TTCCCCCEEEEES
T ss_pred ccCCCCeEEEEeC
Confidence 2367877654
No 200
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=34.69 E-value=64 Score=22.18 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=26.1
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEE
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLII 43 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIi 43 (184)
||.|+.-.-.+.+ +.+.|++.|+++..+.+.++ + ..+|.+|+
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~ 57 (154)
T 3gt7_A 9 EILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIIS 57 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEE
T ss_pred cEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEE
Confidence 4555443333444 45778889999887765422 1 35898888
No 201
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=34.60 E-value=1.1e+02 Score=24.98 Aligned_cols=27 Identities=19% Similarity=0.210 Sum_probs=18.0
Q ss_pred EEEEEecCCCHHH--HHHHHHHC-CCeEEEE
Q 030035 2 VVGVLALQGSFNE--HIAALKRL-GVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~qG~~~~--~~~~L~~~-G~~v~~v 29 (184)
||||+.. |.... |...+++. +++++-+
T Consensus 7 rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av 36 (362)
T 3fhl_A 7 KTGLAAF-GMSGQVFHAPFISTNPHFELYKI 36 (362)
T ss_dssp EEEESCC-SHHHHHTTHHHHHHCTTEEEEEE
T ss_pred EEEEECC-CHHHHHHHHHHHhhCCCeEEEEE
Confidence 7888766 66654 56777765 6666644
No 202
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=34.41 E-value=49 Score=27.16 Aligned_cols=27 Identities=7% Similarity=0.183 Sum_probs=18.3
Q ss_pred EEEEEecCCCHH-HHHHHHHHC-CCeEEEE
Q 030035 2 VVGVLALQGSFN-EHIAALKRL-GVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~qG~~~-~~~~~L~~~-G~~v~~v 29 (184)
||||+.. |... .|.+.|++. +++++-+
T Consensus 7 ~vgiiG~-G~~g~~~~~~l~~~~~~~l~av 35 (359)
T 3e18_A 7 QLVIVGY-GGMGSYHVTLASAADNLEVHGV 35 (359)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSTTEEEEEE
T ss_pred cEEEECc-CHHHHHHHHHHHhCCCcEEEEE
Confidence 6888876 5554 467778776 6676654
No 203
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=34.35 E-value=47 Score=25.04 Aligned_cols=32 Identities=25% Similarity=0.181 Sum_probs=19.3
Q ss_pred CCCEE-EEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEch
Q 030035 37 NVSSL-IIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTCA 79 (184)
Q Consensus 37 ~~Dgl-IipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC~ 79 (184)
..|++ ++|||.+|- +. +.+..+.+|||+.+-.
T Consensus 107 ~sda~IvlpGg~GTL-~E----------~~~al~~~kpV~~l~~ 139 (176)
T 2iz6_A 107 SSNVLVAVGMGPGTA-AE----------VALALKAKKPVVLLGT 139 (176)
T ss_dssp GCSEEEEESCCHHHH-HH----------HHHHHHTTCCEEEESC
T ss_pred hCCEEEEecCCccHH-HH----------HHHHHHhCCcEEEEcC
Confidence 46765 558886553 21 2223357999998864
No 204
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=34.31 E-value=68 Score=25.68 Aligned_cols=28 Identities=25% Similarity=0.369 Sum_probs=18.1
Q ss_pred CEEEEEecCCCHHH-HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |+... |.+.|.+. +++++.+
T Consensus 2 ~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v 31 (325)
T 2ho3_A 2 LKLGVIGT-GAISHHFIEAAHTSGEYQLVAI 31 (325)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSEEEEEE
T ss_pred eEEEEEeC-CHHHHHHHHHHHhCCCeEEEEE
Confidence 58999876 66543 66777765 4565533
No 205
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=33.94 E-value=46 Score=26.64 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=28.2
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCC----------------CCCCCCCEEEEc
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKP----------------DQLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~----------------~~l~~~DglIip 44 (184)
|||.|+.-.-...+..+.|.+.|.++.+...+ +.+.++|+++.|
T Consensus 8 mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~ 67 (300)
T 2rir_A 8 LKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILP 67 (300)
T ss_dssp CEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEec
Confidence 67777643323344668899999998765311 124578999883
No 206
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=33.53 E-value=1.3e+02 Score=24.25 Aligned_cols=16 Identities=13% Similarity=0.262 Sum_probs=12.4
Q ss_pred CCCCCCCCEEEEcCCc
Q 030035 32 PDQLQNVSSLIIPGGE 47 (184)
Q Consensus 32 ~~~l~~~DglIipGG~ 47 (184)
.+.++++|.+|++.|.
T Consensus 64 ~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 64 YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp GGGGTTCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 3457789999998873
No 207
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=33.52 E-value=50 Score=26.76 Aligned_cols=28 Identities=29% Similarity=0.462 Sum_probs=18.4
Q ss_pred CEEEEEecCCCHHH-HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |+... |.+.|.+. +++++-+
T Consensus 3 ~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av 32 (344)
T 3ezy_A 3 LRIGVIGL-GRIGTIHAENLKMIDDAILYAI 32 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHGGGSTTEEEEEE
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCcEEEEE
Confidence 38999886 66544 66777664 5666544
No 208
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=32.95 E-value=1.7e+02 Score=25.10 Aligned_cols=30 Identities=10% Similarity=-0.014 Sum_probs=23.5
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~ 30 (184)
|||.|+.+-|.-.+ ..+.|.+.|.++....
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D 50 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANEGYQISGSD 50 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEEcCHHHHHHHHHHHHhCCCeEEEEC
Confidence 47888888887665 7788989998887654
No 209
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=32.58 E-value=34 Score=26.01 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=30.5
Q ss_pred CEEEEEec-----CCC---H--HHHHHHHHH---CCCeEEE---EcCC-CC--------CC--CCCEEEEcCCchh
Q 030035 1 MVVGVLAL-----QGS---F--NEHIAALKR---LGVKGVE---IRKP-DQ--------LQ--NVSSLIIPGGEST 49 (184)
Q Consensus 1 m~IgVl~~-----qG~---~--~~~~~~L~~---~G~~v~~---v~~~-~~--------l~--~~DglIipGG~~~ 49 (184)
|||+|++. .|. - .-+.+.|++ .|+++.. +.+. +. ++ ++|.||.+||.+.
T Consensus 15 ~rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~ 90 (189)
T 1jlj_A 15 IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGF 90 (189)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CEEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEEEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCC
Confidence 57888874 332 1 234577887 7987764 3332 11 22 6899999998643
No 210
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=32.47 E-value=51 Score=26.13 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=33.1
Q ss_pred CEEEEEecC-CCH---HHHHHHHHHCCCeEEEEc------CC--------CCCCCCCEEEEcCCc
Q 030035 1 MVVGVLALQ-GSF---NEHIAALKRLGVKGVEIR------KP--------DQLQNVSSLIIPGGE 47 (184)
Q Consensus 1 m~IgVl~~q-G~~---~~~~~~L~~~G~~v~~v~------~~--------~~l~~~DglIipGG~ 47 (184)
|||.|..-. ..- .++.+.|++.|++++.+. .. .++.++|.||++-..
T Consensus 22 ~~vlvtr~~~~~~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~l~~~l~~~~~~d~lifTS~n 86 (286)
T 1jr2_A 22 MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPR 86 (286)
T ss_dssp CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEEECCHHHHHHHHTCGGGCSEEEECCHH
T ss_pred CEEEEEcCCCCCCCCCcHHHHHHHHCCCceEEEeeEEEecCCHHHHHHHHhCcccccEEEEeCHH
Confidence 577777655 444 778899999999876543 11 234679999998643
No 211
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=32.27 E-value=72 Score=26.40 Aligned_cols=29 Identities=14% Similarity=0.167 Sum_probs=21.1
Q ss_pred EEEEEecCCCHH--------HHHHHHHHCCCeEEEEc
Q 030035 2 VVGVLALQGSFN--------EHIAALKRLGVKGVEIR 30 (184)
Q Consensus 2 ~IgVl~~qG~~~--------~~~~~L~~~G~~v~~v~ 30 (184)
+|||++-.+... .-++.|++.|.+++.-.
T Consensus 15 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~ 51 (336)
T 3sr3_A 15 TIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGS 51 (336)
T ss_dssp EEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECT
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcc
Confidence 799999877542 23456888999998753
No 212
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=32.03 E-value=1.6e+02 Score=22.44 Aligned_cols=46 Identities=9% Similarity=0.176 Sum_probs=26.3
Q ss_pred EEEEEecC--CCH-HHH----HHHHHHCCCeEEEE-cCC---CC-------C--CCCCEEEEcCCc
Q 030035 2 VVGVLALQ--GSF-NEH----IAALKRLGVKGVEI-RKP---DQ-------L--QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~q--G~~-~~~----~~~L~~~G~~v~~v-~~~---~~-------l--~~~DglIipGG~ 47 (184)
+||++.-. ..| .++ .+.+++.|+++.+. ... +. + .++||||+.+..
T Consensus 10 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~ 75 (290)
T 3clk_A 10 VIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIA 75 (290)
T ss_dssp EEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEEEEC----------CHHHHHHSSCCSEEEEESCC
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEeccc
Confidence 68887632 223 223 34566789988876 421 11 1 468999997643
No 213
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=32.03 E-value=90 Score=26.32 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=21.2
Q ss_pred EEEEEecCCCH--------HHHHHHHHHCCCeEEEEc
Q 030035 2 VVGVLALQGSF--------NEHIAALKRLGVKGVEIR 30 (184)
Q Consensus 2 ~IgVl~~qG~~--------~~~~~~L~~~G~~v~~v~ 30 (184)
+|||++-.+.. ..-++.|++.|.++++-.
T Consensus 45 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~ 81 (371)
T 3tla_A 45 TIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGK 81 (371)
T ss_dssp EEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECT
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECC
Confidence 79999987654 223467888999998764
No 214
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=31.98 E-value=84 Score=24.41 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=27.6
Q ss_pred CEEEEEecCCC-----H-----HHHHHHHHHCCCeEEEEcCCCC----C--CCCCEEEE
Q 030035 1 MVVGVLALQGS-----F-----NEHIAALKRLGVKGVEIRKPDQ----L--QNVSSLII 43 (184)
Q Consensus 1 m~IgVl~~qG~-----~-----~~~~~~L~~~G~~v~~v~~~~~----l--~~~DglIi 43 (184)
|||+||.- |. + ..+.+++++.|+++..+...+. + .++|.++.
T Consensus 3 ~~i~il~g-g~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~~~~~~~~~~~~d~v~~ 60 (306)
T 1iow_A 3 DKIAVLLG-GTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI 60 (306)
T ss_dssp CEEEEECC-CSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCGGGTTTTTEEEEEE
T ss_pred cEEEEEeC-CCCccceEcHHhHHHHHHHHHHCCCeEEEEecCchHHHHhhccCCCEEEE
Confidence 57888763 32 1 3467889999999998864322 2 35677654
No 215
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=31.89 E-value=78 Score=25.39 Aligned_cols=28 Identities=21% Similarity=0.364 Sum_probs=18.9
Q ss_pred CEEEEEecCCCHHH-HHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |+... |.+.|.+. +++++.+
T Consensus 4 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av 33 (331)
T 4hkt_A 4 VRFGLLGA-GRIGKVHAKAVSGNADARLVAV 33 (331)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCTTEEEEEE
T ss_pred eEEEEECC-CHHHHHHHHHHhhCCCcEEEEE
Confidence 37898876 66544 67777775 6676644
No 216
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=31.76 E-value=85 Score=26.93 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=15.6
Q ss_pred HHHCCCeEEEEcCCCCCCCCCEEEEcCCc
Q 030035 19 LKRLGVKGVEIRKPDQLQNVSSLIIPGGE 47 (184)
Q Consensus 19 L~~~G~~v~~v~~~~~l~~~DglIipGG~ 47 (184)
|++.|+.+..-..++.+.++|.+|.+-|.
T Consensus 53 L~~~gi~~~~g~~~~~~~~~d~vV~spgi 81 (469)
T 1j6u_A 53 LRKLGIPIFVPHSADNWYDPDLVIKTPAV 81 (469)
T ss_dssp HHHTTCCEESSCCTTSCCCCSEEEECTTC
T ss_pred HHhCCCEEECCCCHHHCCCCCEEEECCCc
Confidence 44444433321233445678999996663
No 217
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=31.49 E-value=1.3e+02 Score=22.34 Aligned_cols=74 Identities=11% Similarity=0.125 Sum_probs=37.7
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCCC----eEEEEcCC-------CC---CCCCCEEEEcC----CchhHHHHHH
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLGV----KGVEIRKP-------DQ---LQNVSSLIIPG----GESTTMARLA 55 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G~----~v~~v~~~-------~~---l~~~DglIipG----G~~~~~~~l~ 55 (184)
+||||+.-.-|-. .-.+.|++.|+ ++..|.-. +. -.+||++|--| |+..-++...
T Consensus 14 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va 93 (156)
T 1c2y_A 14 FRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVV 93 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHTTCCSEEEEEEECCCCSSTHHHHHH
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHHHH
Confidence 3678876554422 12355777885 33444321 11 14799999887 4333333433
Q ss_pred hcCChHHHHHHHHHcCCcEE
Q 030035 56 EYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 56 ~~~~l~~~l~~~~~~g~Pvl 75 (184)
.. -.....+--++.++||.
T Consensus 94 ~~-v~~gl~~v~L~~~vPV~ 112 (156)
T 1c2y_A 94 NS-ASSGVLSAGLNSGVPCV 112 (156)
T ss_dssp HH-HHHHHHHHHHHHTSCEE
T ss_pred HH-HHHHHHHHHhhcCCCEE
Confidence 32 11223333445689973
No 218
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=31.10 E-value=56 Score=25.09 Aligned_cols=35 Identities=26% Similarity=0.201 Sum_probs=20.4
Q ss_pred CCCEE-EEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEE-chHHH
Q 030035 37 NVSSL-IIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT-CAGLI 82 (184)
Q Consensus 37 ~~Dgl-IipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGI-C~G~Q 82 (184)
..|++ ++|||.+|- +.+.+....++||+.+ -.|+.
T Consensus 118 ~sda~IvlpGG~GTL-----------~E~~eal~~~kPV~lln~~g~w 154 (195)
T 1rcu_A 118 NADVVVSIGGEIGTA-----------IEILGAYALGKPVILLRGTGGW 154 (195)
T ss_dssp TCSEEEEESCCHHHH-----------HHHHHHHHTTCCEEEETTSCHH
T ss_pred hCCEEEEecCCCcHH-----------HHHHHHHhcCCCEEEECCCCcc
Confidence 45655 457775542 2233334469999998 34543
No 219
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=30.94 E-value=80 Score=25.46 Aligned_cols=28 Identities=18% Similarity=0.233 Sum_probs=16.8
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v 29 (184)
|||||+...+-...|.+.+ ..+++++-+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav 30 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGI 30 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEE
Confidence 3788887644444566666 555666544
No 220
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=30.84 E-value=50 Score=25.40 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=24.0
Q ss_pred CEEEEEe-cCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcC
Q 030035 1 MVVGVLA-LQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~-~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipG 45 (184)
|||++++ ++|++..+.+.++... +.|.+++.|
T Consensus 4 mri~~isDiHg~~~~l~~~l~~~~-------------~~d~ii~~G 36 (246)
T 3rqz_A 4 MRILIISDVHANLVALEAVLSDAG-------------RVDDIWSLG 36 (246)
T ss_dssp CCEEEECCCTTCHHHHHHHHHHHC-------------SCSEEEECS
T ss_pred cEEEEEeecCCCHHHHHHHHHhcc-------------CCCEEEECC
Confidence 7899886 6899988877777663 456677776
No 221
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=30.29 E-value=1.7e+02 Score=22.32 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=27.8
Q ss_pred EEEEEecCC-C-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCc
Q 030035 2 VVGVLALQG-S-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~qG-~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~ 47 (184)
+||++.-.- + | .+ +.+.+++.|+++.+.....+ + ..+||||+.+..
T Consensus 22 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~ 86 (293)
T 2iks_A 22 SIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSL 86 (293)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred EEEEEeCCCcCcHHHHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 688876422 2 2 22 23456778999887643211 1 479999997643
No 222
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=29.57 E-value=67 Score=21.55 Aligned_cols=29 Identities=21% Similarity=0.192 Sum_probs=22.4
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~ 30 (184)
|+|+|+.. |.+.. +.+.|.+.|.++..+.
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEE
Confidence 78988865 77766 4578888898887774
No 223
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=29.55 E-value=1.5e+02 Score=21.95 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=23.9
Q ss_pred HHHHHHHH----HHCCCeEEEEcCCC----------CCCC-CCEEEE-cCCch
Q 030035 12 FNEHIAAL----KRLGVKGVEIRKPD----------QLQN-VSSLII-PGGES 48 (184)
Q Consensus 12 ~~~~~~~L----~~~G~~v~~v~~~~----------~l~~-~DglIi-pGG~~ 48 (184)
+.++.+.+ ++.|+++....+.. ...+ +|++|| ||++.
T Consensus 26 l~di~~~l~~~a~~~g~~v~~~QSN~EgeLId~Ih~a~~~~~dgiIINpgA~T 78 (149)
T 2uyg_A 26 LEELEALCEAWGAELGLGVVFRQTNYEGQLIEWVQQAHQEGFLAIVLNPGALT 78 (149)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTTTTTCSEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhccCCeeEEEEccchhc
Confidence 45555544 45788888876431 1244 899999 88764
No 224
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=29.46 E-value=62 Score=26.83 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=17.7
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~-G~~v~~v 29 (184)
|||||+...+... .|.+.|.+. +++++-+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av 33 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAA 33 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEE
Confidence 4788877642443 366777664 5666544
No 225
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=29.34 E-value=76 Score=25.53 Aligned_cols=28 Identities=21% Similarity=0.375 Sum_probs=17.6
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCC---CeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLG---VKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G---~~v~~v 29 (184)
|||||+.. |++.. |.+.|++.. ++++-+
T Consensus 3 ~rigiiG~-G~ig~~~~~~l~~~~~~~~~l~av 34 (334)
T 3ohs_X 3 LRWGIVSV-GLISSDFTAVLQTLPRSEHQVVAV 34 (334)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTSCTTTEEEEEE
T ss_pred cEEEEECc-hHHHHHHHHHHHhCCCCCeEEEEE
Confidence 38998875 65544 667777653 345544
No 226
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=29.26 E-value=66 Score=25.41 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=23.5
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcC
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRK 31 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~ 31 (184)
|||+|+.-. .-..+.+++++.|+++..+..
T Consensus 3 m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~ 32 (334)
T 2r85_A 3 VRIATYASH-SALQILKGAKDEGFETIAFGS 32 (334)
T ss_dssp SEEEEESST-THHHHHHHHHHTTCCEEEESC
T ss_pred eEEEEECCh-hHHHHHHHHHhCCCEEEEEEC
Confidence 688887654 556678999999999988853
No 227
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=29.22 E-value=84 Score=26.12 Aligned_cols=45 Identities=11% Similarity=0.000 Sum_probs=31.4
Q ss_pred CEEEEEecCCCHHHHH-HHHHHCCCeEEEEcCC--CC----CCCCCEEEEcC
Q 030035 1 MVVGVLALQGSFNEHI-AALKRLGVKGVEIRKP--DQ----LQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~-~~L~~~G~~v~~v~~~--~~----l~~~DglIipG 45 (184)
|||.+......-..++ +.+++.|+++...... ++ +.++|+|++.+
T Consensus 2 mki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~ 53 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKP 53 (343)
T ss_dssp CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECC
T ss_pred ceEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcC
Confidence 7999988665555555 4456779998877532 22 57899999875
No 228
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=29.10 E-value=1.8e+02 Score=24.82 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=22.0
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~ 30 (184)
+||.|+.+-|.-.+ ..+.|.+.|.++....
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D 49 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNEGYQISGSD 49 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHhCCCEEEEEC
Confidence 46888888886665 7788888888776553
No 229
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=28.98 E-value=18 Score=26.08 Aligned_cols=43 Identities=14% Similarity=0.298 Sum_probs=27.4
Q ss_pred CEEEEEec--CCCHHHHHHHHHH-CCCeEEEEc--C--CCCCCCCCEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHIAALKR-LGVKGVEIR--K--PDQLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~-~G~~v~~v~--~--~~~l~~~DglIip 44 (184)
|||.|+.. .||-..+.+.+.+ +|. +.+.. . ..++.++|.||+.
T Consensus 2 ~k~~I~Y~S~tGnT~~~A~~ia~~lg~-~~~~~~~~~~~~~l~~~d~ii~g 51 (164)
T 2bmv_A 2 GKIGIFFGTDSGNAEAIAEKISKAIGN-AEVVDVAKASKEQFNSFTKVILV 51 (164)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHCS-EEEEEGGGCCHHHHTTCSEEEEE
T ss_pred CeEEEEEECCCchHHHHHHHHHHHcCC-cEEEecccCCHhHHhhCCEEEEE
Confidence 47777653 5777777776644 576 44443 1 2346789999883
No 230
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=28.77 E-value=1.2e+02 Score=24.15 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=19.6
Q ss_pred CEEEEEecCCCHHH-H-HHHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSFNE-H-IAALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~-~~~L~~~G~~v~~v 29 (184)
|||||+.. |+... + .+.|.+.+++++.+
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~~~~~~vav 30 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRATGGEVVSM 30 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHHTTCEEEEE
T ss_pred CeEEEEcc-cHHHHHhhhHHhhcCCCeEEEE
Confidence 78999876 76655 3 56776677777644
No 231
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.77 E-value=1.4e+02 Score=20.24 Aligned_cols=71 Identities=13% Similarity=0.075 Sum_probs=38.9
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEEcCCch--hHHHHHHhcCChHHHHHHHHHcC
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLIIPGGES--TTMARLAEYHNLFPALREFVKMG 71 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIipGG~~--~~~~~l~~~~~l~~~l~~~~~~g 71 (184)
|+|.|+.-.-.+.+ +.+.|++.|+++..+.+.++ + ..+|.+|+--..+ +.++ +.+.|++. ...
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~-------~~~~l~~~-~~~ 75 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLA-------LFRKILAL-DPD 75 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSCHHH-------HHHHHHHH-CTT
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHH-------HHHHHHhh-CCC
Confidence 35555443333344 45778889999887765322 2 3578888732211 1111 23445443 246
Q ss_pred CcEEEEch
Q 030035 72 KPVWGTCA 79 (184)
Q Consensus 72 ~PvlGIC~ 79 (184)
.|++.+..
T Consensus 76 ~pii~ls~ 83 (155)
T 1qkk_A 76 LPMILVTG 83 (155)
T ss_dssp SCEEEEEC
T ss_pred CCEEEEEC
Confidence 88887763
No 232
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=28.76 E-value=67 Score=25.69 Aligned_cols=24 Identities=25% Similarity=0.526 Sum_probs=19.3
Q ss_pred CEEEEEe-cCCCHHHHHHHHHHCCC
Q 030035 1 MVVGVLA-LQGSFNEHIAALKRLGV 24 (184)
Q Consensus 1 m~IgVl~-~qG~~~~~~~~L~~~G~ 24 (184)
|||.|++ ++|++..+.+.|++.+.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~ 25 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEF 25 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTC
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCC
Confidence 7888876 68999999999988764
No 233
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=28.34 E-value=32 Score=26.34 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=28.5
Q ss_pred CEEEEEec-----CCC-----HHHHHHHHHHCCCe--EE---EEcCC-CC--------CC--CCCEEEEcCCch
Q 030035 1 MVVGVLAL-----QGS-----FNEHIAALKRLGVK--GV---EIRKP-DQ--------LQ--NVSSLIIPGGES 48 (184)
Q Consensus 1 m~IgVl~~-----qG~-----~~~~~~~L~~~G~~--v~---~v~~~-~~--------l~--~~DglIipGG~~ 48 (184)
||++|+.. .|. -.-+.+.|++.|++ +. ++.+. +. ++ ++|.||.+||.+
T Consensus 4 ~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg 77 (195)
T 1di6_A 4 LRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTG 77 (195)
T ss_dssp EEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 47888874 332 23355788899876 32 23332 11 22 689999999864
No 234
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=28.15 E-value=1.1e+02 Score=22.45 Aligned_cols=37 Identities=16% Similarity=0.271 Sum_probs=24.1
Q ss_pred HHHHHHHH----HHCCCeEEEEcCCC----------CCCCCCEEEE-cCCch
Q 030035 12 FNEHIAAL----KRLGVKGVEIRKPD----------QLQNVSSLII-PGGES 48 (184)
Q Consensus 12 ~~~~~~~L----~~~G~~v~~v~~~~----------~l~~~DglIi-pGG~~ 48 (184)
+.++.+.+ ++.|+++....+.. ...++|++|| ||++.
T Consensus 27 l~di~~~l~~~a~~~g~~~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~T 78 (143)
T 1gqo_A 27 LTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALS 78 (143)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhc
Confidence 45555544 44688888876441 1246999999 88764
No 235
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=28.15 E-value=1e+02 Score=20.90 Aligned_cols=68 Identities=15% Similarity=0.047 Sum_probs=38.6
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEE----cCCchhHHHHHHhcCChHHHHHHHHHc
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLII----PGGESTTMARLAEYHNLFPALREFVKM 70 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIi----pGG~~~~~~~l~~~~~l~~~l~~~~~~ 70 (184)
+|.|+.-.-.+.+ +.+.|++.|+++..+.+.++ + ..+|.+|+ |+..+. + +.+.|++. ..
T Consensus 16 ~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~--~-------~~~~l~~~-~~ 85 (153)
T 3hv2_A 16 EILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQLLASREVDLVISAAHLPQMDGP--T-------LLARIHQQ-YP 85 (153)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHH--H-------HHHHHHHH-CT
T ss_pred eEEEECCCHHHHHHHHHHhcccCcEEEEECCHHHHHHHHHcCCCCEEEEeCCCCcCcHH--H-------HHHHHHhH-CC
Confidence 4555544434444 44678888998887765432 1 35888888 332211 1 33445542 24
Q ss_pred CCcEEEEch
Q 030035 71 GKPVWGTCA 79 (184)
Q Consensus 71 g~PvlGIC~ 79 (184)
..|++-+..
T Consensus 86 ~~~ii~~s~ 94 (153)
T 3hv2_A 86 STTRILLTG 94 (153)
T ss_dssp TSEEEEECC
T ss_pred CCeEEEEEC
Confidence 678887764
No 236
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=28.05 E-value=1.3e+02 Score=23.87 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=27.9
Q ss_pred CEEEEEecCCC----------HHHHHHHHHHCCCeEEEEcCCCC-C-----CCCCEEEE
Q 030035 1 MVVGVLALQGS----------FNEHIAALKRLGVKGVEIRKPDQ-L-----QNVSSLII 43 (184)
Q Consensus 1 m~IgVl~~qG~----------~~~~~~~L~~~G~~v~~v~~~~~-l-----~~~DglIi 43 (184)
|||+||.- |. -..+.++|++.|++++.+...+. + .++|.++.
T Consensus 14 ~~v~vl~g-g~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~~~~~l~~~~~D~v~~ 71 (317)
T 4eg0_A 14 GKVAVLFG-GESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLSALKDEGFVRAFN 71 (317)
T ss_dssp CEEEEECC-CSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCTTHHHHTTCCEEEE
T ss_pred ceEEEEEC-CCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCchHHHhhhcCCCEEEE
Confidence 47888653 21 23366889999999999974332 2 36787765
No 237
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=27.79 E-value=37 Score=26.32 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=30.3
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEc------CC---------CCCCCCCEEEEcCC
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIR------KP---------DQLQNVSSLIIPGG 46 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~------~~---------~~l~~~DglIipGG 46 (184)
|||.|.--...-.++.+.|++.|+++..+. .. .++.++|.||++-.
T Consensus 7 ~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~ 67 (254)
T 4es6_A 7 WRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSK 67 (254)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSH
T ss_pred CEEEEeCChHHhHHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECH
Confidence 455543333345668899999999887653 11 13567999999864
No 238
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=27.71 E-value=1.2e+02 Score=19.93 Aligned_cols=68 Identities=10% Similarity=0.006 Sum_probs=38.5
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEE-EcCCCCC------CCCCEEEEc----CCchhHHHHHHhcCChHHHHHHHHH
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVE-IRKPDQL------QNVSSLIIP----GGESTTMARLAEYHNLFPALREFVK 69 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~-v~~~~~l------~~~DglIip----GG~~~~~~~l~~~~~l~~~l~~~~~ 69 (184)
||.|+.-.-.+.+ +.+.|++.|+++.. ..+.++. ..+|.+|+- ++.. ..+ +.+.|++.
T Consensus 11 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~-g~~-------~~~~l~~~-- 80 (140)
T 3cg0_A 11 GVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALD-GVE-------TAARLAAG-- 80 (140)
T ss_dssp EEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSC-HHH-------HHHHHHHH--
T ss_pred eEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCC-HHH-------HHHHHHhC--
Confidence 5555444333444 44678888999884 6554321 258888873 2211 111 34455554
Q ss_pred cCCcEEEEch
Q 030035 70 MGKPVWGTCA 79 (184)
Q Consensus 70 ~g~PvlGIC~ 79 (184)
...|++-+..
T Consensus 81 ~~~~ii~ls~ 90 (140)
T 3cg0_A 81 CNLPIIFITS 90 (140)
T ss_dssp SCCCEEEEEC
T ss_pred CCCCEEEEec
Confidence 5789988764
No 239
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=27.71 E-value=1.5e+02 Score=23.83 Aligned_cols=57 Identities=19% Similarity=0.210 Sum_probs=37.2
Q ss_pred HHHHHHHHHCCCeEEEEcCCCCC----CCCCEEEE-cCC-chhHHHHHHhcCChHHHHHHHHHcCCcEE
Q 030035 13 NEHIAALKRLGVKGVEIRKPDQL----QNVSSLII-PGG-ESTTMARLAEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 13 ~~~~~~L~~~G~~v~~v~~~~~l----~~~DglIi-pGG-~~~~~~~l~~~~~l~~~l~~~~~~g~Pvl 75 (184)
....+.+-..|+.+.....++++ ..+|+++| +|- .+...+. +...++.+.+.++|+.
T Consensus 30 n~~AN~~La~GasP~M~~~~~e~~e~~~~a~alvIn~G~l~~~~~~~------~~~a~~~a~~~~~PvV 92 (273)
T 3dzv_A 30 ESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQS------LLAASDYARQVNKLTV 92 (273)
T ss_dssp HHHHHHHHHTTCEEECCCCGGGHHHHHTTCSEEEEECCSCCHHHHHH------HHHHHHHHHHTTCCEE
T ss_pred hhHHHHHHHcCCchhhcCCHHHHHHHHHHCCeEEEecCCCChHHHHH------HHHHHHHHHHcCCcEE
Confidence 34567888899999998877653 57899999 662 2222221 3445555656788874
No 240
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=27.63 E-value=71 Score=25.81 Aligned_cols=44 Identities=16% Similarity=0.339 Sum_probs=30.7
Q ss_pred CEEEEEecCCCH--------HH---HHHHHHHCCCeEEEEcCC--------C--CCCCCCEEEEc
Q 030035 1 MVVGVLALQGSF--------NE---HIAALKRLGVKGVEIRKP--------D--QLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~qG~~--------~~---~~~~L~~~G~~v~~v~~~--------~--~l~~~DglIip 44 (184)
|||+||.+.-|+ .| +.+.+++.|.++.+++-. + |...+|.+++-
T Consensus 1 mkiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~iy~~~fd~vd~n~ydr~~vv 65 (351)
T 1jg7_A 1 MKIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNGVYTKSFDEVDVNDYDRLIVV 65 (351)
T ss_dssp CCEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCCSSEEEGGGSCGGGCSEEEEE
T ss_pred CceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccceeeeecccCCccccceEEEE
Confidence 899999875543 22 346788999999888522 2 34578988773
No 241
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=27.50 E-value=44 Score=24.53 Aligned_cols=62 Identities=21% Similarity=0.218 Sum_probs=36.1
Q ss_pred EEEEEecCCCHHH-----HHHHHHHCCCeEEEEc---CCCCC------CCCCEEEEcCCchhHHHHHHhcCChHHHHHH
Q 030035 2 VVGVLALQGSFNE-----HIAALKRLGVKGVEIR---KPDQL------QNVSSLIIPGGESTTMARLAEYHNLFPALRE 66 (184)
Q Consensus 2 ~IgVl~~qG~~~~-----~~~~L~~~G~~v~~v~---~~~~l------~~~DglIipGG~~~~~~~l~~~~~l~~~l~~ 66 (184)
||-+....|+.++ +...|+..|++++..- +++++ .++|.+.++....+.+..+.+ +.+.|++
T Consensus 20 ~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~---~i~~L~~ 95 (161)
T 2yxb_A 20 KVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKR---LMAKLRE 95 (161)
T ss_dssp EEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHH---HHHHHHH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHH---HHHHHHh
Confidence 4444445665433 3467899999998763 22222 478999998754444433332 4555555
No 242
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=27.41 E-value=1.6e+02 Score=23.51 Aligned_cols=28 Identities=32% Similarity=0.510 Sum_probs=18.2
Q ss_pred CEEEEEecCCCHHH-HHHHHH-H-CCCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALK-R-LGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~-~-~G~~v~~v 29 (184)
|||||+.. |.... |.+.|. + .+++++.+
T Consensus 9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav 39 (346)
T 3cea_A 9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAA 39 (346)
T ss_dssp EEEEEECC-STTHHHHHHHHHHTCSSEEEEEE
T ss_pred ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEE
Confidence 47898886 66544 677777 4 36665544
No 243
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=27.39 E-value=36 Score=24.18 Aligned_cols=76 Identities=12% Similarity=0.061 Sum_probs=42.3
Q ss_pred EEEEEecCCCHHH-----HHHHHHHCCCeEEEEc---CCCCC------CCCCEEEEcCCchhHHHHHHhcCChHHHHHHH
Q 030035 2 VVGVLALQGSFNE-----HIAALKRLGVKGVEIR---KPDQL------QNVSSLIIPGGESTTMARLAEYHNLFPALREF 67 (184)
Q Consensus 2 ~IgVl~~qG~~~~-----~~~~L~~~G~~v~~v~---~~~~l------~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~ 67 (184)
||.+-...|+.++ ....|+..|++++..- +++++ .++|.+.++....+.+..+. .+.+.|++.
T Consensus 5 ~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~---~~i~~l~~~ 81 (137)
T 1ccw_A 5 TIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCK---GLRQKCDEA 81 (137)
T ss_dssp EEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHT---THHHHHHHT
T ss_pred EEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHH---HHHHHHHhc
Confidence 4554455565433 2367899999998653 33332 37899999885544433332 256666653
Q ss_pred HHcCCcEEEEchHHH
Q 030035 68 VKMGKPVWGTCAGLI 82 (184)
Q Consensus 68 ~~~g~PvlGIC~G~Q 82 (184)
-..+.++ ++.|..
T Consensus 82 g~~~i~v--~vGG~~ 94 (137)
T 1ccw_A 82 GLEGILL--YVGGNI 94 (137)
T ss_dssp TCTTCEE--EEEESC
T ss_pred CCCCCEE--EEECCC
Confidence 1113444 455643
No 244
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=27.30 E-value=71 Score=24.83 Aligned_cols=30 Identities=13% Similarity=0.053 Sum_probs=21.6
Q ss_pred CEEEEEecCC--------CHHHHHHHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQG--------SFNEHIAALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~qG--------~~~~~~~~L~~~G~~v~~v~ 30 (184)
|||+||.-.- .-..+.+++++.|+++..+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d 39 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYME 39 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEc
Confidence 5999987431 12446789999999887764
No 245
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=27.26 E-value=1.7e+02 Score=22.95 Aligned_cols=45 Identities=18% Similarity=0.219 Sum_probs=27.4
Q ss_pred EEEEEec--CCCH-HHH----HHHHHHCCCeEEEEcCCC----------CC--CCCCEEEEcCC
Q 030035 2 VVGVLAL--QGSF-NEH----IAALKRLGVKGVEIRKPD----------QL--QNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~--qG~~-~~~----~~~L~~~G~~v~~v~~~~----------~l--~~~DglIipGG 46 (184)
+||++.- ...| .++ .+.+++.|+++.+..... .+ ..+||||+.+.
T Consensus 62 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 125 (332)
T 2hsg_A 62 TVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSG 125 (332)
T ss_dssp EEEEEEC--CCSHHHHHHHHHHHHHHHHTCEEEEEECCSHHHHHHHHHHHTSCCSSCCEEECCS
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecC
Confidence 6888763 2233 223 345667899887764321 12 47999999764
No 246
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=26.99 E-value=93 Score=24.74 Aligned_cols=28 Identities=18% Similarity=0.392 Sum_probs=18.0
Q ss_pred CEEEEEecCCCHH-HHHHHHHHC-CCeEEEE
Q 030035 1 MVVGVLALQGSFN-EHIAALKRL-GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~-G~~v~~v 29 (184)
|||||+.. |+.. .|.+.|.+. +++++.+
T Consensus 11 ~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v 40 (315)
T 3c1a_A 11 VRLALIGA-GRWGKNYIRTIAGLPGAALVRL 40 (315)
T ss_dssp EEEEEEEC-TTTTTTHHHHHHHCTTEEEEEE
T ss_pred ceEEEECC-cHHHHHHHHHHHhCCCcEEEEE
Confidence 47999887 5543 366777775 5665533
No 247
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=26.51 E-value=2e+02 Score=21.45 Aligned_cols=45 Identities=9% Similarity=0.067 Sum_probs=26.8
Q ss_pred EEEEEecC-CC-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCC
Q 030035 2 VVGVLALQ-GS-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~q-G~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG 46 (184)
+||++.-. .+ | .+ +.+.+++.|+++.+.....+ + .++||+|+.+.
T Consensus 5 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 68 (275)
T 3d8u_A 5 SIALIIPSLFEKACAHFLPSFQQALNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGS 68 (275)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHTSCEECCEECTTCHHHHHHHHHHHHTSCCCCEEEESS
T ss_pred EEEEEeCCCccccHHHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 68887642 22 2 22 33556778998876643211 1 47899999764
No 248
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=26.44 E-value=1.3e+02 Score=24.83 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=12.7
Q ss_pred CCCCCCCCCEEEEcCC
Q 030035 31 KPDQLQNVSSLIIPGG 46 (184)
Q Consensus 31 ~~~~l~~~DglIipGG 46 (184)
+.+++.++|.+|++.|
T Consensus 83 d~~~~~daDiVIitaG 98 (330)
T 3ldh_A 83 DYSVSAGSKLVVITAG 98 (330)
T ss_dssp SSCSCSSCSEEEECCS
T ss_pred CHHHhCCCCEEEEeCC
Confidence 3356789999999887
No 249
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=26.38 E-value=1.9e+02 Score=21.22 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=42.2
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCCCe-----EEEEcCCC----------CCCCCCEEEEcC----CchhHHHHH
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLGVK-----GVEIRKPD----------QLQNVSSLIIPG----GESTTMARL 54 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G~~-----v~~v~~~~----------~l~~~DglIipG----G~~~~~~~l 54 (184)
+||||+.-.-|-. .-.+.|++.|++ +..|.-.- +-.+||++|--| |+..-++..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIalG~VIrG~T~Hfd~V 92 (154)
T 1hqk_A 13 LRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGVLIRGATPHFDYI 92 (154)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHTCTTCCEEEEEEEEECCSSTHHHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHH
Confidence 3688876554422 123557778852 33443221 124699988877 433233333
Q ss_pred HhcCChHHHHHHHHHcCCcE-EE--Ech-HHHHHHH
Q 030035 55 AEYHNLFPALREFVKMGKPV-WG--TCA-GLIFLAN 86 (184)
Q Consensus 55 ~~~~~l~~~l~~~~~~g~Pv-lG--IC~-G~QlLa~ 86 (184)
... -.....+--++.++|| +| +|- =-|.+.+
T Consensus 93 a~~-vs~gl~~v~l~~~vPV~~GVLT~~~~eQA~~R 127 (154)
T 1hqk_A 93 ASE-VSKGLANLSLELRKPITFGVITADTLEQAIER 127 (154)
T ss_dssp HHH-HHHHHHHHHHHHTSCEEEEEEEESSHHHHHHH
T ss_pred HHH-HHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHH
Confidence 332 1122333344578997 45 444 3344443
No 250
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=26.31 E-value=1.5e+02 Score=23.40 Aligned_cols=73 Identities=10% Similarity=0.147 Sum_probs=44.1
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCC---eEEEEcC-C---------------CC----CCCCCEEEEcCCchhHHHHHHh
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGV---KGVEIRK-P---------------DQ----LQNVSSLIIPGGESTTMARLAE 56 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~---~v~~v~~-~---------------~~----l~~~DglIipGG~~~~~~~l~~ 56 (184)
|||||+.. |+... +...|.+.|. ++.++.. + .+ +.++|.||+.= .+..+..
T Consensus 4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav-~p~~~~~--- 78 (280)
T 3tri_A 4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV-KPHQIKM--- 78 (280)
T ss_dssp SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS-CGGGHHH---
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe-CHHHHHH---
Confidence 57999876 88876 5678888887 6666532 1 01 35678888854 2222222
Q ss_pred cCChHHHHHHH-HHcCCcEEEEchHH
Q 030035 57 YHNLFPALREF-VKMGKPVWGTCAGL 81 (184)
Q Consensus 57 ~~~l~~~l~~~-~~~g~PvlGIC~G~ 81 (184)
..+.|+.. ...+..++-++.|.
T Consensus 79 ---vl~~l~~~~l~~~~iiiS~~agi 101 (280)
T 3tri_A 79 ---VCEELKDILSETKILVISLAVGV 101 (280)
T ss_dssp ---HHHHHHHHHHTTTCEEEECCTTC
T ss_pred ---HHHHHHhhccCCCeEEEEecCCC
Confidence 34445555 54455667666775
No 251
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=26.24 E-value=2.3e+02 Score=22.25 Aligned_cols=65 Identities=23% Similarity=0.200 Sum_probs=36.0
Q ss_pred EEEEEecC--CC-HHHHH----HHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ--GS-FNEHI----AALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q--G~-~~~~~----~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+||++.-. .. |.++. +.+++.|+++.+.....+ + ..+||||+.+...+. +
T Consensus 70 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~-----------~ 138 (344)
T 3kjx_A 70 LVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSE-----------A 138 (344)
T ss_dssp EEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCH-----------H
T ss_pred EEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCH-----------H
Confidence 58887532 22 33333 445667998877643211 1 368999998643221 1
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++.+.+.++|+.-+
T Consensus 139 ~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 139 ARAMLDAAGIPVVEI 153 (344)
T ss_dssp HHHHHHHCSSCEEEE
T ss_pred HHHHHHhCCCCEEEE
Confidence 223333467787655
No 252
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=26.20 E-value=91 Score=25.75 Aligned_cols=71 Identities=21% Similarity=0.316 Sum_probs=41.5
Q ss_pred EEEEEecCCCHH--------HHHHHHHHCCCeEEEEcCC---------------CCC------CCCCEEEE-cCCchhHH
Q 030035 2 VVGVLALQGSFN--------EHIAALKRLGVKGVEIRKP---------------DQL------QNVSSLII-PGGESTTM 51 (184)
Q Consensus 2 ~IgVl~~qG~~~--------~~~~~L~~~G~~v~~v~~~---------------~~l------~~~DglIi-pGG~~~~~ 51 (184)
+|||++-.+... .-++.|++.|.++++-... ++| ++.|+|+. -||+.+.
T Consensus 14 ~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~- 92 (331)
T 4e5s_A 14 EIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYNSN- 92 (331)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCGG-
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccHH-
Confidence 799998776542 2346688899999875421 122 35678877 4566544
Q ss_pred HHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 52 ARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 52 ~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
++.+.-+ ++.|+ ++-|+++|--
T Consensus 93 -rlL~~lD-~~~i~---~~PK~~~GyS 114 (331)
T 4e5s_A 93 -GLLKYLD-YDLIR---ENPKFFCGYS 114 (331)
T ss_dssp -GGGGGCC-HHHHH---TSCCEEEECG
T ss_pred -HHHhhcC-hhHHH---hCCeEEEEec
Confidence 3333212 34444 2467777754
No 253
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=26.17 E-value=1.7e+02 Score=23.11 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=16.8
Q ss_pred CEEEEEecCCCHHH-HHHHHHH----CCCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKR----LGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~----~G~~v~~v 29 (184)
|||||+.. |.+.. |++.+.+ .+++++-+
T Consensus 8 ~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav 40 (294)
T 1lc0_A 8 FGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGF 40 (294)
T ss_dssp EEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEE
T ss_pred ceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEE
Confidence 47998876 66543 6666644 35555544
No 254
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=26.01 E-value=1.7e+02 Score=23.82 Aligned_cols=27 Identities=26% Similarity=0.146 Sum_probs=17.8
Q ss_pred CEEEEEecCCCHHHHH-HHHHHCCCeEEEE
Q 030035 1 MVVGVLALQGSFNEHI-AALKRLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~-~~L~~~G~~v~~v 29 (184)
|||+||.- |.+...+ +.|.+ ..++.+.
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~ 44 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIG 44 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEE
T ss_pred cEEEEECC-CHHHHHHHHHHhc-CCCeEEE
Confidence 89999976 8887744 55644 3455443
No 255
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=25.97 E-value=46 Score=24.68 Aligned_cols=45 Identities=13% Similarity=0.046 Sum_probs=26.0
Q ss_pred CEEEEEec--CCCHHHHHHHHHH-CCCeEEEEcCC--------CCCCCCCEEEEcC
Q 030035 1 MVVGVLAL--QGSFNEHIAALKR-LGVKGVEIRKP--------DQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~-~G~~v~~v~~~--------~~l~~~DglIipG 45 (184)
|||.|+.. .||-..+.+.+.+ ++.+...+... +++.++|+|||..
T Consensus 7 ~kiliiy~S~~GnT~~lA~~ia~~l~~~~~~v~~~~~~~~~~~~~l~~~D~ii~gs 62 (193)
T 3d7n_A 7 SNTVVVYHSGYGHTHRMAEAVAEGAEATLHAIDAEGNLSEDGWAALDAADAIIFGT 62 (193)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHTCEEEECCTTSCCCHHHHHHHHHCSEEEEEE
T ss_pred CEEEEEEECCChHHHHHHHHHHHHhhhcceEeeecCCCCHhHHHHHHHCCEEEEEe
Confidence 57888765 4565556655433 44444444331 2355799999953
No 256
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=25.97 E-value=90 Score=25.06 Aligned_cols=31 Identities=19% Similarity=0.046 Sum_probs=23.8
Q ss_pred CEEEEEecCCC-----HHHHHHHHHHCCCeEEEEcC
Q 030035 1 MVVGVLALQGS-----FNEHIAALKRLGVKGVEIRK 31 (184)
Q Consensus 1 m~IgVl~~qG~-----~~~~~~~L~~~G~~v~~v~~ 31 (184)
|||.++.+.+. +..+.+.|++.|.+|.++..
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 89998776542 44567889999999998854
No 257
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=25.63 E-value=68 Score=24.50 Aligned_cols=46 Identities=17% Similarity=0.106 Sum_probs=32.3
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEc-----CCCC-------CCCCCEEEEcCC
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIR-----KPDQ-------LQNVSSLIIPGG 46 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~-----~~~~-------l~~~DglIipGG 46 (184)
|||.|---...-.++.+.|++.|+++..+. ...+ +.++|.||++-.
T Consensus 2 ~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~~l~~~d~viftS~ 59 (240)
T 3mw8_A 2 MKLLLTRPEGKNAAMASALDALAIPYLVEPLLSVEAAAVTQAQLDELSRADILIFIST 59 (240)
T ss_dssp CCEEECSCTTSCHHHHHHHHHHTCCEEECCSCEEEECCCCHHHHHHHTTCSEEEECSH
T ss_pred CEEEEeCChHHhHHHHHHHHHCCCcEEEeCcEEEeccccHHHHHHHhcCCCEEEEECH
Confidence 566665545566788999999999876553 1112 467999999854
No 258
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=25.62 E-value=1.5e+02 Score=22.91 Aligned_cols=51 Identities=12% Similarity=0.048 Sum_probs=30.3
Q ss_pred HHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEE
Q 030035 16 IAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 16 ~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGI 77 (184)
.+.+++.|+++.+.....+ + .++||||+.+..... +.++.+.+.++|+.-+
T Consensus 50 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-----------~~~~~l~~~~iPvV~i 112 (305)
T 3huu_A 50 NQACNVRGYSTRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDD-----------PIEHLLNEFKVPYLIV 112 (305)
T ss_dssp HHHHHHHTCEEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTC-----------HHHHHHHHTTCCEEEE
T ss_pred HHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCc-----------HHHHHHHHcCCCEEEE
Confidence 3456778999887753321 1 479999997754221 1233333457777655
No 259
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=25.31 E-value=53 Score=28.12 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=23.5
Q ss_pred HHHHHHHCCCeEEEE---cCC-CC--------CCCCCEEEEcCCch
Q 030035 15 HIAALKRLGVKGVEI---RKP-DQ--------LQNVSSLIIPGGES 48 (184)
Q Consensus 15 ~~~~L~~~G~~v~~v---~~~-~~--------l~~~DglIipGG~~ 48 (184)
+...|++.|+++... .+. +. ++++|.||.+||.+
T Consensus 209 L~~~l~~~G~~v~~~~iv~Dd~~~i~~al~~a~~~~DlvittGG~s 254 (411)
T 1g8l_A 209 VHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVS 254 (411)
T ss_dssp HHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEECSSSC
T ss_pred HHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhcCCEEEECCCCC
Confidence 557889999987643 332 11 23689999999864
No 260
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=25.23 E-value=99 Score=21.26 Aligned_cols=28 Identities=18% Similarity=0.331 Sum_probs=19.0
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEEcCC
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEIRKP 32 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v~~~ 32 (184)
|||+|+. + .+.+-.++-+|+++..+.++
T Consensus 4 mkiaVIg---D-~dtv~GFrLaGi~~~~v~~~ 31 (109)
T 2d00_A 4 VRMAVIA---D-PETAQGFRLAGLEGYGASSA 31 (109)
T ss_dssp CCEEEEE---C-HHHHHHHHHTTSEEEECSSH
T ss_pred cEEEEEe---C-HHHHHHHHHcCCeEEEeCCH
Confidence 6888864 4 56666777888877666443
No 261
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=24.83 E-value=2.3e+02 Score=23.43 Aligned_cols=46 Identities=9% Similarity=0.156 Sum_probs=30.2
Q ss_pred CEEEEEecCCCHH-HHHHHHHHCCC---eEEEEc---------------------CCCCCCCCCEEEEcCC
Q 030035 1 MVVGVLALQGSFN-EHIAALKRLGV---KGVEIR---------------------KPDQLQNVSSLIIPGG 46 (184)
Q Consensus 1 m~IgVl~~qG~~~-~~~~~L~~~G~---~v~~v~---------------------~~~~l~~~DglIipGG 46 (184)
|||||+.-.|... ++++.|.+..+ ++..+. +.++++++|.+++.-|
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~ 72 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAG 72 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCC
Confidence 6899999888764 47788887532 333221 1234568899998655
No 262
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=24.76 E-value=1e+02 Score=23.70 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=41.1
Q ss_pred CEEEEEecCCCHHH-HHHHHHHCCCe-EEEEcC-------------------CCC-CCCCCEEEEcCCchhHHHHHHhcC
Q 030035 1 MVVGVLALQGSFNE-HIAALKRLGVK-GVEIRK-------------------PDQ-LQNVSSLIIPGGESTTMARLAEYH 58 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~G~~-v~~v~~-------------------~~~-l~~~DglIipGG~~~~~~~l~~~~ 58 (184)
|||+|+.. |+... +.+.|.+.|.+ +..+.. .++ ++++|.+|+.=.... ...
T Consensus 11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~-~~~----- 83 (266)
T 3d1l_A 11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA-FAE----- 83 (266)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH-HHH-----
T ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH-HHH-----
Confidence 68999876 88766 45778788887 444421 112 357898888644332 111
Q ss_pred ChHHHHHHHHHcCCcEEEEchHH
Q 030035 59 NLFPALREFVKMGKPVWGTCAGL 81 (184)
Q Consensus 59 ~l~~~l~~~~~~g~PvlGIC~G~ 81 (184)
+.+.+......+..++-++.|.
T Consensus 84 -v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 84 -LLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp -HHHHHHTTCCTTCEEEECCTTS
T ss_pred -HHHHHHhhcCCCcEEEECCCCC
Confidence 2333333333456566555553
No 263
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=24.27 E-value=43 Score=27.16 Aligned_cols=41 Identities=24% Similarity=0.350 Sum_probs=27.7
Q ss_pred EEEEEecCCCHHHHHHHHHHCCCeEEEEc-CCC-----------CCCCCCEEEEcCC
Q 030035 2 VVGVLALQGSFNEHIAALKRLGVKGVEIR-KPD-----------QLQNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~qG~~~~~~~~L~~~G~~v~~v~-~~~-----------~l~~~DglIipGG 46 (184)
||+|+ |.| -.++.+++.+.++.++. +++ -|+++|.+||+|.
T Consensus 143 kV~vI---G~f-P~i~~~~~~~~~l~V~E~~p~~g~~p~~~~~~~lp~~D~viiTgs 195 (270)
T 3l5o_A 143 KVGVV---GHF-PHLESLLEPICDLSILEWSPEEGDYPLPASEFILPECDYVYITCA 195 (270)
T ss_dssp EEEEE---SCC-TTHHHHHTTTSEEEEEESSCCTTCEEGGGHHHHGGGCSEEEEETH
T ss_pred EEEEE---CCc-hhHHHHHhcCCCEEEEECCCCCCCCChhHHHHhhccCCEEEEEee
Confidence 66665 555 34566777788887774 221 1468999999985
No 264
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=24.25 E-value=51 Score=28.13 Aligned_cols=36 Identities=25% Similarity=0.430 Sum_probs=23.1
Q ss_pred HHHHHHHCCCeEEEE---cCC-CC--------CCCCCEEEEcCCchhH
Q 030035 15 HIAALKRLGVKGVEI---RKP-DQ--------LQNVSSLIIPGGESTT 50 (184)
Q Consensus 15 ~~~~L~~~G~~v~~v---~~~-~~--------l~~~DglIipGG~~~~ 50 (184)
+...|++.|+++... .+. +. ++++|.||.+||.+..
T Consensus 212 L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlVittGG~s~g 259 (402)
T 1uz5_A 212 LCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGASGG 259 (402)
T ss_dssp HHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC---
T ss_pred HHHHHHhCCCeEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEcCCCCCC
Confidence 557889999987653 322 11 2368999999987543
No 265
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=24.20 E-value=75 Score=24.77 Aligned_cols=23 Identities=26% Similarity=0.330 Sum_probs=13.8
Q ss_pred hHHHHHHHHH-cCCcEE----EEchHHH
Q 030035 60 LFPALREFVK-MGKPVW----GTCAGLI 82 (184)
Q Consensus 60 l~~~l~~~~~-~g~Pvl----GIC~G~Q 82 (184)
+.+.|+++.+ .+|||. |.|+|..
T Consensus 67 i~~~l~~~~~~~~kPVia~v~g~a~~gG 94 (240)
T 3rst_A 67 IHKKLEEIKKETKKPIYVSMGSMAASGG 94 (240)
T ss_dssp HHHHHHHHHHHHCCCEEEEEEEEEETHH
T ss_pred HHHHHHHHHHhCCCeEEEEECCeehHhH
Confidence 3455666555 589996 5565444
No 266
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=24.19 E-value=1.2e+02 Score=22.54 Aligned_cols=73 Identities=11% Similarity=0.041 Sum_probs=36.2
Q ss_pred EEEEEecCCCHH-------HHHHHHHHCCCe---EEEEcCC--C-------CC---CCCCEEEEcC----CchhHHHHHH
Q 030035 2 VVGVLALQGSFN-------EHIAALKRLGVK---GVEIRKP--D-------QL---QNVSSLIIPG----GESTTMARLA 55 (184)
Q Consensus 2 ~IgVl~~qG~~~-------~~~~~L~~~G~~---v~~v~~~--~-------~l---~~~DglIipG----G~~~~~~~l~ 55 (184)
||||+.-.-|-. .-.+.|++.|++ +.+++-| - .+ .+||++|--| |+..-++...
T Consensus 12 ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va 91 (158)
T 1di0_A 12 KIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLARTGRYAAIVGAAFVIDGGIYDHDFVA 91 (158)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEECCCCSSBCCHHHH
T ss_pred EEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcHHHHHH
Confidence 788877554422 123556667752 3333322 1 11 4699998877 4322223333
Q ss_pred hcCChHHHHHHHHHcCCcEE
Q 030035 56 EYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 56 ~~~~l~~~l~~~~~~g~Pvl 75 (184)
.. -.....+--++.++||.
T Consensus 92 ~~-vs~Gl~~v~L~~~vPV~ 110 (158)
T 1di0_A 92 TA-VINGMMQVQLETEVPVL 110 (158)
T ss_dssp HH-HHHHHHHHHHHHCCCEE
T ss_pred HH-HHHHHHHHHhhcCCCEE
Confidence 21 01223333445689974
No 267
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=24.14 E-value=1.2e+02 Score=22.46 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=24.3
Q ss_pred HHHHHHHHH----HCCCeEEEEcCCC----------CCCCCCEEEE-cCCch
Q 030035 12 FNEHIAALK----RLGVKGVEIRKPD----------QLQNVSSLII-PGGES 48 (184)
Q Consensus 12 ~~~~~~~L~----~~G~~v~~v~~~~----------~l~~~DglIi-pGG~~ 48 (184)
+.++.+.++ +.|+++....+.. ...++|++|| ||++.
T Consensus 34 l~di~~~l~~~a~~~g~~~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~T 85 (153)
T 3lwz_A 34 LAEIVSQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFT 85 (153)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCceEEEccccce
Confidence 555555554 4788888876441 1256899999 88864
No 268
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=24.14 E-value=2.2e+02 Score=22.70 Aligned_cols=68 Identities=12% Similarity=0.108 Sum_probs=41.8
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCeEEEE-------------cCCCCC-CCCCEEEEcCCchhHHHHHHhcCChHHHHHH
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVKGVEI-------------RKPDQL-QNVSSLIIPGGESTTMARLAEYHNLFPALRE 66 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~v~~v-------------~~~~~l-~~~DglIipGG~~~~~~~l~~~~~l~~~l~~ 66 (184)
|||+++.+ |++...+-.. + +.+++.+ .+.+++ .+.|.++-..+... +.+.+.+
T Consensus 13 ~rV~i~G~-GaIG~~v~~~-~-~leLv~v~~~k~gelgv~a~~d~d~lla~pD~VVe~A~~~a----------v~e~~~~ 79 (253)
T 1j5p_A 13 MTVLIIGM-GNIGKKLVEL-G-NFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEA----------VKEYSLQ 79 (253)
T ss_dssp CEEEEECC-SHHHHHHHHH-S-CCSEEEEECSSCCCCSSSEECSSCCCCTTCCEEEECSCHHH----------HHHHHHH
T ss_pred ceEEEECc-CHHHHHHHhc-C-CcEEEEEEeccccccCceeeCCHHHHhhCCCEEEECCCHHH----------HHHHHHH
Confidence 78998664 8886654222 3 6666432 222332 46688887765432 2344566
Q ss_pred HHHcCCcEEEEchHH
Q 030035 67 FVKMGKPVWGTCAGL 81 (184)
Q Consensus 67 ~~~~g~PvlGIC~G~ 81 (184)
++++|+.++-++.|.
T Consensus 80 iL~aG~dvv~~S~ga 94 (253)
T 1j5p_A 80 ILKNPVNYIIISTSA 94 (253)
T ss_dssp HTTSSSEEEECCGGG
T ss_pred HHHCCCCEEEcChhh
Confidence 667889999888884
No 269
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=24.07 E-value=2.4e+02 Score=21.40 Aligned_cols=31 Identities=6% Similarity=0.113 Sum_probs=20.2
Q ss_pred HHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCC
Q 030035 16 IAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (184)
Q Consensus 16 ~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG 46 (184)
.+.+++.|+++.+.....+ + .++||||+.+.
T Consensus 31 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (287)
T 3bbl_A 31 VREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSI 73 (287)
T ss_dssp HHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSC
T ss_pred HHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeec
Confidence 3456778998877642211 1 46899999764
No 270
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=23.98 E-value=68 Score=22.88 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=27.3
Q ss_pred CEEEEEec--CCCHHHHHHHHHH-CCC-eEEEEc--C--CCCCCCCCEEEEc
Q 030035 1 MVVGVLAL--QGSFNEHIAALKR-LGV-KGVEIR--K--PDQLQNVSSLIIP 44 (184)
Q Consensus 1 m~IgVl~~--qG~~~~~~~~L~~-~G~-~v~~v~--~--~~~l~~~DglIip 44 (184)
|||.|+.. .||-..+.+.+.+ ++. ++.++. . .+++.++|.|||.
T Consensus 2 mkilIiY~S~tGnT~~vA~~ia~~l~~~~v~~~~~~~~~~~~l~~~d~ii~g 53 (169)
T 1obo_A 2 KKIGLFYGTQTGKTESVAEIIRDEFGNDVVTLHDVSQAEVTDLNDYQYLIIG 53 (169)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHCTTTEEEEETTTCCGGGGGGCSEEEEE
T ss_pred CeEEEEEECCCchHHHHHHHHHHHhCcCCcEEEEcccCCHHHHhhCCEEEEE
Confidence 78888764 5776667766544 332 344433 2 2457789999984
No 271
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=23.93 E-value=2.4e+02 Score=23.11 Aligned_cols=15 Identities=13% Similarity=0.412 Sum_probs=12.0
Q ss_pred CCCCCCCEEEEcCCc
Q 030035 33 DQLQNVSSLIIPGGE 47 (184)
Q Consensus 33 ~~l~~~DglIipGG~ 47 (184)
+++.++|.+|++.|.
T Consensus 72 ~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 72 SDAKDADLVVITAGA 86 (326)
T ss_dssp GGGTTCSEEEECCCC
T ss_pred HHhcCCCEEEECCCC
Confidence 346789999999874
No 272
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=23.92 E-value=1e+02 Score=23.71 Aligned_cols=29 Identities=24% Similarity=0.291 Sum_probs=23.5
Q ss_pred CEEEEEecCCCHHHH-HHHHHHCCCeEEEEc
Q 030035 1 MVVGVLALQGSFNEH-IAALKRLGVKGVEIR 30 (184)
Q Consensus 1 m~IgVl~~qG~~~~~-~~~L~~~G~~v~~v~ 30 (184)
|||+|+.. |+.... ...|.+.|.++..+.
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWL 30 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEEEEE
Confidence 89999886 888774 477888999888774
No 273
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=23.92 E-value=2.6e+02 Score=21.86 Aligned_cols=78 Identities=17% Similarity=0.105 Sum_probs=43.9
Q ss_pred EEEEEecC--CC-HHH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ--GS-FNE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q--G~-~~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+||++.-. .. |.+ +.+.+++.|+++.+.....+ + ..+||||+.+..... +
T Consensus 64 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-----------~ 132 (339)
T 3h5o_A 64 TVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-----------P 132 (339)
T ss_dssp EEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT-----------T
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH-----------H
Confidence 58887532 11 233 34567778999887653311 1 479999997743221 1
Q ss_pred HHHHHHHcCCcEEEEc---------------hHHHHHHHhhhc
Q 030035 63 ALREFVKMGKPVWGTC---------------AGLIFLANKAVG 90 (184)
Q Consensus 63 ~l~~~~~~g~PvlGIC---------------~G~QlLa~~~~~ 90 (184)
.++.+.+.++|+.-+- .|..++++++.+
T Consensus 133 ~~~~l~~~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~ 175 (339)
T 3h5o_A 133 FERILSQHALPVVYMMDLADDGRCCVGFSQEDAGAAITRHLLS 175 (339)
T ss_dssp HHHHHHHTTCCEEEEESCCSSSCCEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEeecCCCCCeEEEECHHHHHHHHHHHHHH
Confidence 1223334578887652 255666666654
No 274
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=23.87 E-value=2.6e+02 Score=21.80 Aligned_cols=45 Identities=11% Similarity=0.190 Sum_probs=27.3
Q ss_pred EEEEEecC--CCH-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCC
Q 030035 2 VVGVLALQ--GSF-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~q--G~~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG 46 (184)
+||++.-. ..| .+ +.+.+++.|+++.+.....+ + ..+||||+.+.
T Consensus 65 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 128 (332)
T 2o20_A 65 TVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGS 128 (332)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSS
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 58887632 222 22 23456678998887643221 1 47999999764
No 275
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=23.84 E-value=88 Score=23.44 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=24.4
Q ss_pred CEEEEEe-cCCCHHHHHHHHHHCCCeEEEEcCCCCCCCCCEEEEcC
Q 030035 1 MVVGVLA-LQGSFNEHIAALKRLGVKGVEIRKPDQLQNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~-~qG~~~~~~~~L~~~G~~v~~v~~~~~l~~~DglIipG 45 (184)
|||.|++ +.|++..+.+.|++.+.. .+.|.+|+.|
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~----------~~~d~~i~~G 48 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFD----------NKKDLLISVG 48 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCC----------TTTCEEEECS
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCC----------CCCCEEEEeC
Confidence 6788886 689998888888876421 1356666666
No 276
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=23.83 E-value=1.2e+02 Score=22.64 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=37.2
Q ss_pred EEEEEecCCCHHH-----HHHHHHHCCCeEEEEcCC---CCC------CCCCEEEEcCCchhHHHHHHhcCChHHHHHH
Q 030035 2 VVGVLALQGSFNE-----HIAALKRLGVKGVEIRKP---DQL------QNVSSLIIPGGESTTMARLAEYHNLFPALRE 66 (184)
Q Consensus 2 ~IgVl~~qG~~~~-----~~~~L~~~G~~v~~v~~~---~~l------~~~DglIipGG~~~~~~~l~~~~~l~~~l~~ 66 (184)
||-+....|+.++ +...|+..|++++..... +++ .+.|.|.++....+.+..+.+ +.+.|++
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~---~i~~l~~ 165 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKS---TIDALIA 165 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHH---HHHHHHH
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHH---HHHHHHh
Confidence 4555556776544 336688999999987432 221 378999998865444444332 3444543
No 277
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=23.70 E-value=1.2e+02 Score=20.71 Aligned_cols=70 Identities=10% Similarity=0.021 Sum_probs=37.8
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEE-EEcCCCC----C--C--CCCEEEEcCCc--hhHHHHHHhcCChHHHHHHHHH
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGV-EIRKPDQ----L--Q--NVSSLIIPGGE--STTMARLAEYHNLFPALREFVK 69 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~-~v~~~~~----l--~--~~DglIipGG~--~~~~~~l~~~~~l~~~l~~~~~ 69 (184)
||.|+.-.-.+.+ +.+.|++.|++++ .+.+.++ + . .+|.+|+-=.. .+.++ +.+.|++..
T Consensus 38 ~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~-------~~~~lr~~~- 109 (157)
T 3hzh_A 38 NVLIVDDSVFTVKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGIT-------CLSNIMEFD- 109 (157)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHH-------HHHHHHHHC-
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHH-------HHHHHHhhC-
Confidence 4555443333444 4477888999987 6655432 1 2 57888873211 11111 334455432
Q ss_pred cCCcEEEEch
Q 030035 70 MGKPVWGTCA 79 (184)
Q Consensus 70 ~g~PvlGIC~ 79 (184)
...|++-+..
T Consensus 110 ~~~~ii~ls~ 119 (157)
T 3hzh_A 110 KNARVIMISA 119 (157)
T ss_dssp TTCCEEEEES
T ss_pred CCCcEEEEec
Confidence 4678887764
No 278
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=23.63 E-value=1.7e+02 Score=23.54 Aligned_cols=29 Identities=24% Similarity=0.329 Sum_probs=17.6
Q ss_pred CEEEEEecCCCHHH-HHHHHHHC--CCeEEEE
Q 030035 1 MVVGVLALQGSFNE-HIAALKRL--GVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~qG~~~~-~~~~L~~~--G~~v~~v 29 (184)
+||||+...+.... |.+.|++. +++++-+
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav 50 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAV 50 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEE
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEE
Confidence 37888775313433 77888776 4565544
No 279
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=23.38 E-value=1.1e+02 Score=20.63 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=20.6
Q ss_pred CEEEEEecCCCHHHHHHHHHHCCCe-EEEEcCCC
Q 030035 1 MVVGVLALQGSFNEHIAALKRLGVK-GVEIRKPD 33 (184)
Q Consensus 1 m~IgVl~~qG~~~~~~~~L~~~G~~-v~~v~~~~ 33 (184)
|||+|+. + .+..-.++-+|++ +..+.+++
T Consensus 1 MkiaVIG---D-~dtv~GFrLaGi~~v~~v~~~e 30 (101)
T 2ov6_A 1 MELAVIG---K-SEFVTGFRLAGISKVYETPDIP 30 (101)
T ss_dssp CCEEEEE---C-HHHHHHHHHHTCCEEEECCSTT
T ss_pred CEEEEEE---C-HHHHHHHHHcCCCceEecCCHH
Confidence 8888864 5 6677788899998 54454443
No 280
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=23.37 E-value=2.8e+02 Score=21.93 Aligned_cols=65 Identities=14% Similarity=0.189 Sum_probs=37.5
Q ss_pred EEEEEecCCC---HHH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQGS---FNE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~qG~---~~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+||++.-.-+ |.+ +.+.+++.|+++.+.....+ + ..+||||+.+...+. +
T Consensus 72 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~-----------~ 140 (355)
T 3e3m_A 72 FVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTE-----------Q 140 (355)
T ss_dssp EEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCCH-----------H
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCH-----------H
Confidence 5888753221 222 34557778999887753221 1 478999997643221 1
Q ss_pred HHHHHHHcCCcEEEE
Q 030035 63 ALREFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~~~~~~g~PvlGI 77 (184)
.++.+.+.++|+.-+
T Consensus 141 ~~~~l~~~~iPvV~i 155 (355)
T 3e3m_A 141 TIRLLQRASIPIVEI 155 (355)
T ss_dssp HHHHHHHCCSCEEEE
T ss_pred HHHHHHhCCCCEEEE
Confidence 233334568888766
No 281
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=23.19 E-value=38 Score=27.60 Aligned_cols=15 Identities=0% Similarity=0.058 Sum_probs=7.4
Q ss_pred HHHHHHHCCCeEEEE
Q 030035 15 HIAALKRLGVKGVEI 29 (184)
Q Consensus 15 ~~~~L~~~G~~v~~v 29 (184)
..+.+.+.++.+++-
T Consensus 117 m~~~va~~~~~~vlM 131 (270)
T 4hb7_A 117 MFQIVAKYDAEIILM 131 (270)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCeEEe
Confidence 444455555555544
No 282
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=22.98 E-value=2.4e+02 Score=21.15 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=27.3
Q ss_pred EEEEEecC----CC-HHHH----HHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCC
Q 030035 2 VVGVLALQ----GS-FNEH----IAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~q----G~-~~~~----~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG 46 (184)
+||++.-. .. +.++ .+.+++.|+++.+.....+ + .++|+||+.+.
T Consensus 21 ~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 86 (296)
T 3brq_A 21 TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 86 (296)
T ss_dssp EEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred eEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecC
Confidence 68887643 22 2233 3456778999887753221 1 47999999764
No 283
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=22.65 E-value=1.3e+02 Score=22.21 Aligned_cols=74 Identities=12% Similarity=0.080 Sum_probs=36.3
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCCCe---EEE--EcCCCC-------C---CCCCEEEEcC----CchhHHHHH
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLGVK---GVE--IRKPDQ-------L---QNVSSLIIPG----GESTTMARL 54 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G~~---v~~--v~~~~~-------l---~~~DglIipG----G~~~~~~~l 54 (184)
+||||+.-.-|-. .-.+.|++.|++ +.+ |.-.-+ + .+||++|--| |+..-++..
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~V 91 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAETGRYGAVLGTAFVVNGGIYRHEFV 91 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHHHTCCSEEEEEEECCCCSSBCCHHH
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeccccCCCcHHHHH
Confidence 3788877554422 123456666742 333 432211 1 4699998877 432222333
Q ss_pred HhcCChHHHHHHHHHcCCcEE
Q 030035 55 AEYHNLFPALREFVKMGKPVW 75 (184)
Q Consensus 55 ~~~~~l~~~l~~~~~~g~Pvl 75 (184)
... -..-..+--++.++||.
T Consensus 92 a~~-vs~Gl~~v~L~~~vPV~ 111 (157)
T 2obx_A 92 ASA-VIDGMMNVQLSTGVPVL 111 (157)
T ss_dssp HHH-HHHHHHHHHHHHCCCEE
T ss_pred HHH-HHHHHHHHHhhcCCCEE
Confidence 321 01223333445689974
No 284
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=22.61 E-value=2.7e+02 Score=21.81 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=20.0
Q ss_pred EEEEEecCCCHHH--HHHHHHHC--CCeEEEE
Q 030035 2 VVGVLALQGSFNE--HIAALKRL--GVKGVEI 29 (184)
Q Consensus 2 ~IgVl~~qG~~~~--~~~~L~~~--G~~v~~v 29 (184)
|||||+-.+...+ +.+.+++. |+++..+
T Consensus 120 rIgVlaT~~T~~~~~y~~~l~~~~~g~~v~~~ 151 (273)
T 2oho_A 120 QVGVIGTPMTVASDIYRKKIQLLAPSIQVRSL 151 (273)
T ss_dssp EEEEEECHHHHHHTHHHHHHHHHCTTSEEEEE
T ss_pred eEEEEECchhhcchHHHHHHHHhCCCCEEEec
Confidence 7999998876553 44667776 8877654
No 285
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.51 E-value=89 Score=25.65 Aligned_cols=29 Identities=21% Similarity=0.171 Sum_probs=20.6
Q ss_pred EEEEEecCCCH-----HHHHHHHHHCCCeEEEEc
Q 030035 2 VVGVLALQGSF-----NEHIAALKRLGVKGVEIR 30 (184)
Q Consensus 2 ~IgVl~~qG~~-----~~~~~~L~~~G~~v~~v~ 30 (184)
+|+|++-.+.. ..-.+.|++.|.+++.-+
T Consensus 19 ~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~ 52 (311)
T 1zl0_A 19 RVALIAPASAIATDVLEATLRQLEVHGVDYHLGR 52 (311)
T ss_dssp EEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECT
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECc
Confidence 69999876533 234567888999998753
No 286
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=22.33 E-value=1.6e+02 Score=18.89 Aligned_cols=67 Identities=10% Similarity=0.147 Sum_probs=37.4
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEE----cCCchhHHHHHHhcCChHHHHHHHHHc
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLII----PGGESTTMARLAEYHNLFPALREFVKM 70 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIi----pGG~~~~~~~l~~~~~l~~~l~~~~~~ 70 (184)
||.|+.-.-...+ +.+.|++.|+++....+.++ + ..+|.+++ ||..+ ++ +.+.|++. .
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~~p~~~g--~~-------~~~~lr~~--~ 72 (120)
T 3f6p_A 4 KILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDG--VE-------VCREVRKK--Y 72 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETTSTTTHH--HH-------HHHHHHTT--C
T ss_pred eEEEEECCHHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCCCCCCCH--HH-------HHHHHHhc--C
Confidence 4555443333444 44678889999887765432 1 36888888 43221 11 23344432 3
Q ss_pred CCcEEEEch
Q 030035 71 GKPVWGTCA 79 (184)
Q Consensus 71 g~PvlGIC~ 79 (184)
..|++-+..
T Consensus 73 ~~~ii~~t~ 81 (120)
T 3f6p_A 73 DMPIIMLTA 81 (120)
T ss_dssp CSCEEEEEE
T ss_pred CCCEEEEEC
Confidence 678877654
No 287
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=22.29 E-value=2.4e+02 Score=20.76 Aligned_cols=75 Identities=19% Similarity=0.196 Sum_probs=37.9
Q ss_pred CEEEEEecCCCHH-------HHHHHHHHCCCe-----EEEEcCCC-------CC---CCCCEEEEcC----CchhHHHHH
Q 030035 1 MVVGVLALQGSFN-------EHIAALKRLGVK-----GVEIRKPD-------QL---QNVSSLIIPG----GESTTMARL 54 (184)
Q Consensus 1 m~IgVl~~qG~~~-------~~~~~L~~~G~~-----v~~v~~~~-------~l---~~~DglIipG----G~~~~~~~l 54 (184)
+||||+.-.-|-. .-.+.|++.|++ +..|.-.- .+ .+||++|--| |+..-++..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~V 92 (154)
T 1rvv_A 13 LKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYV 92 (154)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHHTSCCSEEEEEEEEECCSSSHHHHH
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHH
Confidence 3688877554422 123557778853 33443221 11 4699988777 433233333
Q ss_pred HhcCChHHHHHHHHHcCCcE-EE
Q 030035 55 AEYHNLFPALREFVKMGKPV-WG 76 (184)
Q Consensus 55 ~~~~~l~~~l~~~~~~g~Pv-lG 76 (184)
... -.....+--++.++|| +|
T Consensus 93 ~~~-vs~Gl~~v~l~~~vPV~~G 114 (154)
T 1rvv_A 93 CNE-AAKGIAQAANTTGVPVIFG 114 (154)
T ss_dssp HHH-HHHHHHHHHHHHCSCEEEE
T ss_pred HHH-HHHHHHHHHhhhCCCEEEE
Confidence 332 1122333344578997 45
No 288
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.08 E-value=1.8e+02 Score=19.24 Aligned_cols=69 Identities=17% Similarity=0.183 Sum_probs=37.5
Q ss_pred EEEEEecCCCHHH-HHHHHHHCCCeEEEEcCCCC----C--CCCCEEEE----cCCchhHHHHHHhcCChHHHHHHHH-H
Q 030035 2 VVGVLALQGSFNE-HIAALKRLGVKGVEIRKPDQ----L--QNVSSLII----PGGESTTMARLAEYHNLFPALREFV-K 69 (184)
Q Consensus 2 ~IgVl~~qG~~~~-~~~~L~~~G~~v~~v~~~~~----l--~~~DglIi----pGG~~~~~~~l~~~~~l~~~l~~~~-~ 69 (184)
+|.|+.-.-.+.+ +.+.|++.|+++....+.++ + ..+|.+++ ||..+.. +.+.|++.- .
T Consensus 6 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~---------~~~~lr~~~~~ 76 (136)
T 3t6k_A 6 TLLIVDDDDTVAEMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVLLPGIDGYT---------LCKRVRQHPLT 76 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHH---------HHHHHHHSGGG
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHH---------HHHHHHcCCCc
Confidence 3444433333444 44678889999887765432 1 35788887 4432211 233444321 2
Q ss_pred cCCcEEEEch
Q 030035 70 MGKPVWGTCA 79 (184)
Q Consensus 70 ~g~PvlGIC~ 79 (184)
...|++-+..
T Consensus 77 ~~~pii~~t~ 86 (136)
T 3t6k_A 77 KTLPILMLTA 86 (136)
T ss_dssp TTCCEEEEEC
T ss_pred CCccEEEEec
Confidence 3678887664
No 289
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=22.03 E-value=67 Score=23.17 Aligned_cols=29 Identities=10% Similarity=0.041 Sum_probs=14.8
Q ss_pred CEEEEEecC----CCHHHHHHHHH-HCCCeEEEE
Q 030035 1 MVVGVLALQ----GSFNEHIAALK-RLGVKGVEI 29 (184)
Q Consensus 1 m~IgVl~~q----G~~~~~~~~L~-~~G~~v~~v 29 (184)
|||.|+.-. |+-..+.+.+. ....+.+.+
T Consensus 1 Mkilii~gS~~~~g~t~~la~~i~~~l~~~~i~l 34 (174)
T 3gfs_A 1 MNMLVINGTPRKHGRTRIAASYIAALYHTDLIDL 34 (174)
T ss_dssp --CEEEECCCCTTCHHHHHHHHHHHHTTCEEEET
T ss_pred CEEEEEECCCCCCCcHHHHHHHHHHhCcceEEee
Confidence 888887643 55555665543 355554433
No 290
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=21.82 E-value=1.1e+02 Score=24.83 Aligned_cols=44 Identities=9% Similarity=0.069 Sum_probs=29.9
Q ss_pred CEEEEEecCC-----CHHHHHHHHHHCCCeEEEEcCCCC---C--CCCCEEEEcC
Q 030035 1 MVVGVLALQG-----SFNEHIAALKRLGVKGVEIRKPDQ---L--QNVSSLIIPG 45 (184)
Q Consensus 1 m~IgVl~~qG-----~~~~~~~~L~~~G~~v~~v~~~~~---l--~~~DglIipG 45 (184)
|||.++...+ ....+.+.|++.|.+|.++.. .. + ..+..+-+++
T Consensus 21 MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~ 74 (398)
T 3oti_A 21 MRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAP 74 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESST
T ss_pred CEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCC
Confidence 8999887653 234567889999999998866 32 1 2455555554
No 291
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=21.67 E-value=2.7e+02 Score=21.19 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=30.4
Q ss_pred HHHHHHCCCeEEEEcCC--CC-------C--CCCCEEEEcCCchhHHHHHHhcCChHHHHHHHHHcCCcEEEEc
Q 030035 16 IAALKRLGVKGVEIRKP--DQ-------L--QNVSSLIIPGGESTTMARLAEYHNLFPALREFVKMGKPVWGTC 78 (184)
Q Consensus 16 ~~~L~~~G~~v~~v~~~--~~-------l--~~~DglIipGG~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC 78 (184)
.+.+++.|+.+.+.... +. + ..+||||+.+..... +.++.+.+.++|+.-+.
T Consensus 33 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-----------~~~~~l~~~~iPvV~~~ 95 (294)
T 3qk7_A 33 GIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED-----------FRLQYLQKQNFPFLALG 95 (294)
T ss_dssp HHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC-----------HHHHHHHHTTCCEEEES
T ss_pred HHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh-----------HHHHHHHhCCCCEEEEC
Confidence 35567789988876422 11 1 379999998753221 22333344577776553
No 292
>1d3y_A DNA topoisomerase VI A subunit; DNA binding protein, SPO11 homolog; HET: DNA; 2.00A {Methanocaldococcus jannaschii} SCOP: e.12.1.1
Probab=21.34 E-value=1.2e+02 Score=24.66 Aligned_cols=43 Identities=16% Similarity=0.164 Sum_probs=26.1
Q ss_pred CCEEEEcC-CchhHHHHHHhcCChHHHHHHHHHcCCcEEEEc----hHH-HHHHHh
Q 030035 38 VSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGTC----AGL-IFLANK 87 (184)
Q Consensus 38 ~DglIipG-G~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGIC----~G~-QlLa~~ 87 (184)
.+.|+|+| |+++...+ .+...|.+.. +.|+++.+ .|+ .+++..
T Consensus 146 ~~~ilIt~kGyPd~aTR-----~fl~~L~~~~--~lpv~~l~D~DP~G~~~I~~ty 194 (301)
T 1d3y_A 146 HNCILVSLKGVPARATR-----RFIKRLHEEH--DLPVLVFTDGDPYGYLNIYRTL 194 (301)
T ss_dssp TTEEEEECCSSCCHHHH-----HHHHHHHHHH--TCCEEEECCBSHHHHHTHHHHH
T ss_pred CCEEEEECCCCCCHHHH-----HHHHHHHHhc--CCCEEEEecCChHHHHHHHHHH
Confidence 57899988 77654211 1223333322 79999998 899 555544
No 293
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=21.26 E-value=1.6e+02 Score=24.74 Aligned_cols=26 Identities=8% Similarity=0.133 Sum_probs=17.3
Q ss_pred CEEEEEecCCCHHH--HHHHHHHC-CCeEE
Q 030035 1 MVVGVLALQGSFNE--HIAALKRL-GVKGV 27 (184)
Q Consensus 1 m~IgVl~~qG~~~~--~~~~L~~~-G~~v~ 27 (184)
|||||+.. |+... |.+.|.+. +++++
T Consensus 84 irigiIG~-G~~g~~~~~~~l~~~~~~~lv 112 (433)
T 1h6d_A 84 FGYAIVGL-GKYALNQILPGFAGCQHSRIE 112 (433)
T ss_dssp EEEEEECC-SHHHHHTHHHHTTTCSSEEEE
T ss_pred eEEEEECC-cHHHHHHHHHHHhhCCCcEEE
Confidence 47888877 77763 67777664 45554
No 294
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=21.17 E-value=2.4e+02 Score=21.08 Aligned_cols=63 Identities=11% Similarity=0.106 Sum_probs=35.8
Q ss_pred EEEEEecC-CC-H-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCCchhHHHHHHhcCChHH
Q 030035 2 VVGVLALQ-GS-F-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGGESTTMARLAEYHNLFP 62 (184)
Q Consensus 2 ~IgVl~~q-G~-~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG~~~~~~~l~~~~~l~~ 62 (184)
+||++.-. .+ | .+ +.+.+++.|+++.+.....+ + ..+||||+.+. .. +
T Consensus 10 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~~-~~------------~ 76 (277)
T 3e61_A 10 LIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTAF-NE------------N 76 (277)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECGG-GH------------H
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC-Ch------------H
Confidence 47877543 22 2 22 33557778999887754322 1 47999999762 11 1
Q ss_pred HHH-HHHHcCCcEEEE
Q 030035 63 ALR-EFVKMGKPVWGT 77 (184)
Q Consensus 63 ~l~-~~~~~g~PvlGI 77 (184)
.++ .+.+.++|+.-+
T Consensus 77 ~~~~~l~~~~iPvV~~ 92 (277)
T 3e61_A 77 IIENTLTDHHIPFVFI 92 (277)
T ss_dssp HHHHHHHHC-CCEEEG
T ss_pred HHHHHHHcCCCCEEEE
Confidence 233 444568888765
No 295
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=21.07 E-value=2.8e+02 Score=21.05 Aligned_cols=46 Identities=7% Similarity=0.156 Sum_probs=27.7
Q ss_pred EEEEEecC-CC-H-HH----HHHHHHHCCCeEEEEcCCC----------CC-----CCCCEEEEcCCc
Q 030035 2 VVGVLALQ-GS-F-NE----HIAALKRLGVKGVEIRKPD----------QL-----QNVSSLIIPGGE 47 (184)
Q Consensus 2 ~IgVl~~q-G~-~-~~----~~~~L~~~G~~v~~v~~~~----------~l-----~~~DglIipGG~ 47 (184)
+||++.-. .+ | .+ +.+.+++.|+++.+..... .+ .++||||+.+..
T Consensus 10 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 77 (290)
T 2rgy_A 10 IIGLFVPTFFGSYYGTILKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHD 77 (290)
T ss_dssp EEEEECSCSCSHHHHHHHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred eEEEEeCCCCCchHHHHHHHHHHHHHHCCCEEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCC
Confidence 68887632 22 2 22 3345677899988764321 11 368999997653
No 296
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=20.93 E-value=3.5e+02 Score=24.73 Aligned_cols=77 Identities=16% Similarity=0.061 Sum_probs=45.5
Q ss_pred CEEEEEecCC-CH--------HHHHHHHHHCCCeEEEEcCCCC-------CCCCCEEEEcCCch---hHHHHHHhcCChH
Q 030035 1 MVVGVLALQG-SF--------NEHIAALKRLGVKGVEIRKPDQ-------LQNVSSLIIPGGES---TTMARLAEYHNLF 61 (184)
Q Consensus 1 m~IgVl~~qG-~~--------~~~~~~L~~~G~~v~~v~~~~~-------l~~~DglIipGG~~---~~~~~l~~~~~l~ 61 (184)
|||.|+.-.- .. ..+...|++.|+++....+.++ -.++|.+|+-=..+ ..++-+ .+.
T Consensus 1 m~ILiVdDd~~~~~~~~~~~~~~L~~~L~~~g~~v~~a~~g~~al~~~~~~~~~d~vilDi~lp~~~~~~~G~----~ll 76 (755)
T 2vyc_A 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVR----QLI 76 (755)
T ss_dssp CEEEEECCTTSTTSHHHHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTTCCCSEEEEECCCCSHHHHHHHH----HHH
T ss_pred CeEEEEeCCccccccccHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhcCCCCcEEEEeCCCCcccccccHH----HHH
Confidence 7887765543 33 4466789999999998876432 12489999832111 112111 134
Q ss_pred HHHHHHHHcCCcEEEEchHHH
Q 030035 62 PALREFVKMGKPVWGTCAGLI 82 (184)
Q Consensus 62 ~~l~~~~~~g~PvlGIC~G~Q 82 (184)
+.||+. ..+.||+-+.+=-.
T Consensus 77 ~~iR~~-~~~iPIi~lTa~~~ 96 (755)
T 2vyc_A 77 GKLHER-QQNVPVFLLGDREK 96 (755)
T ss_dssp HHHHHH-STTCCEEEEECHHH
T ss_pred HHHHHh-CCCCCEEEEecCCc
Confidence 555553 23689998876543
No 297
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=20.69 E-value=61 Score=27.01 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=21.9
Q ss_pred CCCEEEEcC-CchhHHHHHHhcCChHHHHHHHHHcCCcEEEE
Q 030035 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 37 ~~DglIipG-G~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGI 77 (184)
.++||||-| |.+.... .+.+.|+++.++|+||.=+
T Consensus 245 g~~GiVle~~G~Gn~p~------~~~~~l~~a~~~Gi~VV~~ 280 (334)
T 3nxk_A 245 GTKGIVVAGSGAGSIHK------NQKDVLKELLKKGLKVVVS 280 (334)
T ss_dssp TCCEEEEEEBTTTBCCH------HHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEeeECCCCCcH------HHHHHHHHHHHCCCEEEEe
Confidence 467888755 4332211 1567788888888888754
No 298
>1ehs_A STB, heat-stable enterotoxin B; disulfide; NMR {Escherichia coli} SCOP: g.2.1.1
Probab=20.66 E-value=14 Score=21.37 Aligned_cols=14 Identities=21% Similarity=0.465 Sum_probs=11.1
Q ss_pred EEEEchHHHHHHHh
Q 030035 74 VWGTCAGLIFLANK 87 (184)
Q Consensus 74 vlGIC~G~QlLa~~ 87 (184)
..|-|+|.|+|..+
T Consensus 32 tagacfgaqimvaa 45 (48)
T 1ehs_A 32 TAGACFGAQIMVAA 45 (48)
T ss_dssp SCCTTTTTHHHHTT
T ss_pred ccccccchhHhhhc
Confidence 46889999998654
No 299
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=20.61 E-value=2.1e+02 Score=22.78 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=32.0
Q ss_pred EEEEEecC--C--C----HHHHHHHHHHCCCeEEEEcCC--C-------C-CCCCCEEEEcCCchhH
Q 030035 2 VVGVLALQ--G--S----FNEHIAALKRLGVKGVEIRKP--D-------Q-LQNVSSLIIPGGESTT 50 (184)
Q Consensus 2 ~IgVl~~q--G--~----~~~~~~~L~~~G~~v~~v~~~--~-------~-l~~~DglIipGG~~~~ 50 (184)
|+.|+... | . +.++.+.|++.|+++.+..+. . + .+++|.||.-||-+|.
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~~~d~vv~~GGDGTl 76 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTV 76 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTTTCSEEEEEECHHHH
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhcCCCEEEEEccchHH
Confidence 67777653 3 2 234556788889888776422 1 1 2478999999997764
No 300
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=20.48 E-value=3.1e+02 Score=21.37 Aligned_cols=45 Identities=13% Similarity=0.207 Sum_probs=28.3
Q ss_pred EEEEEecC----CCH-HH----HHHHHHHCCCeEEEEcCCCC----------C--CCCCEEEEcCC
Q 030035 2 VVGVLALQ----GSF-NE----HIAALKRLGVKGVEIRKPDQ----------L--QNVSSLIIPGG 46 (184)
Q Consensus 2 ~IgVl~~q----G~~-~~----~~~~L~~~G~~v~~v~~~~~----------l--~~~DglIipGG 46 (184)
+||++.-. ..| .+ +.+.+++.|+++.+.....+ + ..+||||+.+.
T Consensus 63 ~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 128 (338)
T 3dbi_A 63 TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 128 (338)
T ss_dssp EEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred EEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 58887643 223 22 33556778999888753321 1 47999999764
No 301
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=20.27 E-value=70 Score=26.45 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=22.9
Q ss_pred CCCEEEEcC-CchhHHHHHHhcCChHHHHHHHHHcCCcEEEE
Q 030035 37 NVSSLIIPG-GESTTMARLAEYHNLFPALREFVKMGKPVWGT 77 (184)
Q Consensus 37 ~~DglIipG-G~~~~~~~l~~~~~l~~~l~~~~~~g~PvlGI 77 (184)
.++||||-| |.+..-. .+.+.|+++.++|+||.-+
T Consensus 241 g~~GiVle~~G~Gn~p~------~~~~~l~~a~~~Gi~VV~~ 276 (327)
T 1o7j_A 241 GVKGIVYAGMGAGSVSV------RGIAGMRKALEKGVVVMRS 276 (327)
T ss_dssp TCSEEEEEEBTTTBCCH------HHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeeECCCCCCH------HHHHHHHHHHHCCceEEEE
Confidence 578888866 4433211 2567788888889888643
No 302
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.25 E-value=41 Score=23.30 Aligned_cols=34 Identities=18% Similarity=0.364 Sum_probs=25.0
Q ss_pred CEEEEEecCCC---HHHHHHHHHHCCCeEEEEcCCCC
Q 030035 1 MVVGVLALQGS---FNEHIAALKRLGVKGVEIRKPDQ 34 (184)
Q Consensus 1 m~IgVl~~qG~---~~~~~~~L~~~G~~v~~v~~~~~ 34 (184)
|.|.|+.+.-+ +....+.+++.|+.+..++++++
T Consensus 1 mnivivvfstdeetlrkfkdiikkngfkvrtvrspqe 37 (134)
T 2l69_A 1 MNIVIVVFSTDEETLRKFKDIIKKNGFKVRTVRSPQE 37 (134)
T ss_dssp CCEEEEECCCCHHHHHHHHHHHHHTTCEEEEECSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHHHHHhcCceEEEecCHHH
Confidence 67777777665 33345678889999999998743
No 303
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=20.11 E-value=2.2e+02 Score=22.72 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=18.9
Q ss_pred EEEEEecCCCHHH--HHHHHHHC--CCeEE
Q 030035 2 VVGVLALQGSFNE--HIAALKRL--GVKGV 27 (184)
Q Consensus 2 ~IgVl~~qG~~~~--~~~~L~~~--G~~v~ 27 (184)
|||||+-.+...+ +.+.+++. +.++.
T Consensus 132 rIgVLaT~~T~~s~~y~~~l~~~~~~~~v~ 161 (290)
T 2vvt_A 132 KIGVIGTLGTIKSASYEIAIKSKAPAIEVT 161 (290)
T ss_dssp EEEEEECHHHHHTTHHHHHHHTTCTTSEEE
T ss_pred EEEEEeCcHhhhhHHHHHHHHHhCCCCEEE
Confidence 7999998887765 45677776 45554
Done!