BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030037
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/189 (73%), Positives = 160/189 (84%), Gaps = 9/189 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60
MSSPSKRR+MD+MKLMMSDY VE INDG+ EF VEF GPK+S+YEGGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPL 120
YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQ+WSPMFDL+N+FE+FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 121 NGDAASLMMKDRKQYDQKVKEYCERYAKKENIVNSTADEESGDEEISEEESESSDDD--- 177
NG+AA+LMM+DR Y+Q+VKEYCE+YAK + +E S D+E+SE+E S DD
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKP----RADTEEMSSDDEMSEDEYASDGDDEDD 176
Query: 178 --IAGHADP 184
IAG DP
Sbjct: 177 VAIAGKLDP 185
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 278 bits (711), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/184 (74%), Positives = 158/184 (85%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60
MSSPSKRR+MD+MKLMMSDY V+ INDG++EF V FHGPK+S+Y+GGVWK+RVEL +AYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPL 120
YKSPSIGF NKIYHPNVDEMSGSVCLDVINQ+WSPMFDL+NIFE FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120
Query: 121 NGDAASLMMKDRKQYDQKVKEYCERYAKKENIVNSTADEESGDEEISEEESESSDDDIAG 180
NG+AASLMM+D+ Y+ KVKEYCERYAK E+I +EES +E E +S D+ I G
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180
Query: 181 HADP 184
HADP
Sbjct: 181 HADP 184
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 123/148 (83%), Positives = 142/148 (95%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60
MSSPSKRR+MD+MKLMMSDY VETINDG+ EF VEF+GPK+SLY+GGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPL 120
YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQ+WSPMFDL+N+FE+FLPQLLLYPNPSDPL
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 121 NGDAASLMMKDRKQYDQKVKEYCERYAK 148
NG+AA+LMM+DR Y+Q+VKEYCE+YAK
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAK 148
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/184 (70%), Positives = 156/184 (84%), Gaps = 1/184 (0%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60
M+SPSKRR+MD+MKLMMSDY V+T+ND L F V FHGP +SLY+GGVWKI+VELP+AYP
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPL 120
YKSPS+GFVNKIYHPNVDE SG+VCLDVINQ+WSPMFDL+N+FESFLPQLLLYPNPSDP
Sbjct: 61 YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120
Query: 121 NGDAASLMMKDRKQYDQKVKEYCERYAKKENIVNSTADEESGDEEISEEESESSDDDIAG 180
NG+AASL+M+DR Y+ KVKEYCE+YAK E I++ D++S E+ + + DD+I G
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSED-GSDSDDDDDDEIVG 179
Query: 181 HADP 184
ADP
Sbjct: 180 KADP 183
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 143/183 (78%), Gaps = 2/183 (1%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60
MSSP +R + DVMKL+MSDY V +ND + EF V FHGP E+ Y GG+WK+ VELP YP
Sbjct: 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60
Query: 61 YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPL 120
+KSPSIGFVN+I+HPN+DE+SGSVCLDVINQ+WSPMFD++NIFE FLPQLL YPN SDPL
Sbjct: 61 WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPL 120
Query: 121 NGDAASLMMKDRKQYDQKVKEYCERYAKKENIVNSTADEESGDEEISEEESESSDDDIAG 180
NG+AA+L++++ Y KV++Y RYA KE+ + T ++ S D+ +S ++ES D+IAG
Sbjct: 121 NGEAAALLLREPNTYYAKVRDYIARYANKED-ADITLNDSSDDDTMSSIDTESG-DEIAG 178
Query: 181 HAD 183
D
Sbjct: 179 PMD 181
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 127/155 (81%), Gaps = 4/155 (2%)
Query: 1 MSSPS---KRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPD 57
MSSPS +R D DV+KL+ S + V TI GLNEF V+F+GP+ + YEGGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEV-TILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQ+W+ ++DL NIFESFLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGDAASLMMKDRKQYDQKVKEYCERYAKKENI 152
DPLNGDAA++ + ++Y QK+KEY ++YA +E +
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEAL 154
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 127/155 (81%), Gaps = 4/155 (2%)
Query: 1 MSSPS---KRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPD 57
MSSPS +R D DV+KL+ S + V TI GLNEF V+F+GP+ + YEGGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEV-TILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQ+W+ ++DL NIFESFLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGDAASLMMKDRKQYDQKVKEYCERYAKKENI 152
DPLNGDAA++ + ++Y QK+KEY ++YA +E +
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEAL 154
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 127/155 (81%), Gaps = 4/155 (2%)
Query: 1 MSSPS---KRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPD 57
MSSPS +R D DV+KL+ S + V TI GLNEF V+F+GP+ + YEGGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEV-TILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPS 117
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQ+W+ ++DL NIFESFLPQLL YPNP
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPI 119
Query: 118 DPLNGDAASLMMKDRKQYDQKVKEYCERYAKKENI 152
DPLNGDAA++ + ++Y QK+KEY ++YA +E +
Sbjct: 120 DPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEAL 154
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 206 bits (523), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 122/150 (81%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYP 60
MSS +R + DVMKL+MSD+ V+ IND + EF+V+F GPK++ YE GVW++ VELPD YP
Sbjct: 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYP 60
Query: 61 YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPL 120
YKSPSIGFVNKI+HPN+D SGS+CLDVIN +WSP++DL+NI E +P LL PN SDPL
Sbjct: 61 YKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPL 120
Query: 121 NGDAASLMMKDRKQYDQKVKEYCERYAKKE 150
N +AA+L ++D+K Y++K+KEY ++YA KE
Sbjct: 121 NNEAATLQLRDKKLYEEKIKEYIDKYATKE 150
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 1 MSSPSKRRDMDVMKLM---MSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPD 57
M+S KR + KL+ + E +D L F V GP++S YE G++++ + LPD
Sbjct: 1 MASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPD 60
Query: 58 AYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPS 117
YP ++P + F+ KIYHPN+D + G +CLDV+ +WSP + + S + LL PNP+
Sbjct: 61 DYPMEAPKVRFLTKIYHPNIDRL-GRICLDVLKTNWSPALQIRTVLLS-IQALLASPNPN 118
Query: 118 DPLNGDAASLMMKDRKQYDQKVKEYCERYAKKE 150
DPL D A +K+ + K +E+ + YAKK+
Sbjct: 119 DPLANDVAEDWIKNEQGAKAKAREWTKLYAKKK 151
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Query: 11 DVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVN 70
DV + + V TIND ++ F GP+ + YEGG + + +E+P YP++ P + F
Sbjct: 15 DVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDT 74
Query: 71 KIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMK 130
KIYHPNV +G++CLD++ WSP++ + + S L LL P PS+P + A + ++
Sbjct: 75 KIYHPNVSSQTGAICLDILKDQWSPVYTMKSALIS-LQSLLCTPEPSNPQDAQVAQVYLQ 133
Query: 131 DRKQYDQKVKEYCERYA 147
+ +Q+ + +E+ YA
Sbjct: 134 NYQQFVRTAREWTSSYA 150
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP +S Y+GGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL D A + D+++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP +S Y+GGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL D A + D+++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP +S Y+GGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL D A + D+++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP +S Y+GGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL D A + D+++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP ES Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y+Q +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
M++PS+RR M K + D + D + + GP+E+ +E G +K+ +E
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ I S + LL PNP
Sbjct: 61 EEYPNKPPTVKFISKMFHPNV-YADGSICLDILQNRWSPTYDVAAILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER--YAKKENIVNSTADEESGDEEISEEESESS 174
+ P N AA L ++R++Y+++V++ E+ EN ++ ++ EEI+ + +
Sbjct: 119 NSPANSLAAQLYQENRREYEKRVQQIVEQSWLNFGENEGDAVLKDDVEIEEIAAPGANDA 178
Query: 175 DDD 177
DDD
Sbjct: 179 DDD 181
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+ ++RR M K + SD + + + + + GP +S++EG +K+ ++
Sbjct: 1 MSTAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP +P++ F++K++HPNV GS+CLD++ WSP++D+ I S + LL PNP
Sbjct: 61 EEYPNDAPTVKFLSKMFHPNV-YADGSICLDILQNQWSPIYDIAAILTS-IQSLLCDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N ++A L +++++Y++KVKE E+
Sbjct: 119 NSPANSESARLFRENKREYNRKVKEIVEQ 147
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben
PE=2 SV=1
Length = 151
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 5/150 (3%)
Query: 1 MSSPSKRRDMDVMKLMMSDY-NVETINDGLNE--FNVEFHGPKESLYEGGVWKIRVELPD 57
MSS +R + +LM + I D N F+V GP +S +EGGV+K+ + LP+
Sbjct: 1 MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPE 60
Query: 58 AYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPS 117
YP +P + F+ KIYHPN+D + G +CLDV+ WSP + I S + LL PNP
Sbjct: 61 DYPMSAPKVRFITKIYHPNIDRL-GRICLDVLKDKWSPALQIRTILLS-IQALLSAPNPD 118
Query: 118 DPLNGDAASLMMKDRKQYDQKVKEYCERYA 147
DPL D A L + + + +E+ ++YA
Sbjct: 119 DPLANDVAELWKVNEAEAIRNAREWTQKYA 148
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D + ++ + +N GP ++ +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ FV+K++HPNV G +CLD++ WSP +D+ I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKVFHPNV-YADGGICLDILQNRWSPTYDVSAILTS-IQSLLSDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L ++R++Y+++VK E+
Sbjct: 119 NSPANSTAAQLYKENRREYEKRVKACVEQ 147
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+ +KRR + K + SD + D + +N GP E+ +E G +++ +
Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
DAYP K P++ F++K++HPN+ +G +CLD++ WSP +D+ I S + LL PNP
Sbjct: 61 DAYPNKPPTVRFISKMFHPNI-YANGELCLDILQNRWSPTYDVAAILTS-VQSLLNDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCE 144
+ P N DAA L ++ K+Y+++VK+ E
Sbjct: 119 ASPANVDAAQLFKENLKEYERRVKKTVE 146
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 87/148 (58%), Gaps = 6/148 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+ +KRR + K + SD + D + +N GP E+ +E G +++ +
Sbjct: 1 MSTAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
DAYP K P++ F++K++HPN+ +G +CLD++ WSP +D+ I S + LL PNP
Sbjct: 61 DAYPNKPPTVRFISKMFHPNI-YANGELCLDILQNRWSPTYDVAAILTS-VQSLLNDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCE 144
+ P N DAA L ++ K+Y+++VK+ E
Sbjct: 119 ASPANVDAAQLFKENLKEYERRVKKTVE 146
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP +S Y+GGV+ + + P YP+K P + F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A DR++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P+++R M K + D + ++ + +N GP ++ ++GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ FV++++HPN+ GS+CLD++ WSP++D+ I S + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N +AA + +++++Y++KV+E E+
Sbjct: 119 NSPANSEAARMYSENKREYNRKVREVVEQ 147
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D L + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR++Y++ +E+
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTR 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|Q94490|UBCB_DICDI Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum
GN=ubcB PE=1 SV=1
Length = 148
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 11 DVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVN 70
D++K S + ++D L ++ GP+ S +E GV+ + +++P YP+K P++ F
Sbjct: 13 DMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTT 72
Query: 71 KIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMK 130
KIYHPN+ G++C +V + +WSP +L++ + + +L PNP +PL + A
Sbjct: 73 KIYHPNIKTSDGAICAEVFS-TWSPQLKILDVLTT-IRSILTDPNPDNPLETEIAQQFKT 130
Query: 131 DRKQYDQKVKEYCERYAK 148
DR +++ KE+ ++YAK
Sbjct: 131 DRNAFNKTAKEWTKKYAK 148
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR +Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR +Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR +Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3
PE=2 SV=1
Length = 147
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR +Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR +Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 25 INDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSV 84
+ D + + GP +S Y+GGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCE 144
CLD++ WSP + + S LL PNP DPL + A + DR +Y++ +E+ +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQ 143
Query: 145 RYA 147
+YA
Sbjct: 144 KYA 146
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D V + + ++N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D V + + ++N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D V + + ++N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D V + + ++N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSDYNVETIN----DGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D V + + ++N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ F++K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFLSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 92/149 (61%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P+++R M K + D + ++ + +N GP ++ ++GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ FV++++HPN+ GS+CLD++ WSP++D+ I S + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N +AA + +++++Y+++V+E E+
Sbjct: 119 NSPANSEAARMFSENKREYNRRVREVVEQ 147
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P+++R M K + D + ++ + +N GP ++ ++GG +K+ ++
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ FV++++HPN+ GS+CLD++ WSP++D+ I S + LL PNP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N +AA + + +++Y+++V+E E+
Sbjct: 119 NSPANSEAARMFSESKREYNRRVREVVEQ 147
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35
PE=1 SV=1
Length = 153
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 27 DGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCL 86
D + FNV GP +S YEGGV+K+ + LP+ YP +P + F+ KIYHPN+D++ G +CL
Sbjct: 32 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 90
Query: 87 DVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCERY 146
D++ WSP + + S + LL PNP DPL+ + A + + KE+ Y
Sbjct: 91 DILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLY 149
Query: 147 A 147
A
Sbjct: 150 A 150
>sp|O13685|UBC13_SCHPO Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc13 PE=1 SV=1
Length = 148
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Query: 27 DGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCL 86
D L F + GP++S YEGG + + + LPD YP P++ F+ KIYHPNVD++ G +CL
Sbjct: 29 DNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKL-GRICL 87
Query: 87 DVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCERY 146
+ + WSP + + S + L+ PNP DPL+ D A + ++ Q +E+ ++Y
Sbjct: 88 STLKKDWSPALQIRTVLLS-IQALMGAPNPDDPLDNDVAKIWKENEPQAIANAREWTKKY 146
Query: 147 A 147
A
Sbjct: 147 A 147
>sp|A5PKP9|UB2D4_XENLA Ubiquitin-conjugating enzyme E2 D4 OS=Xenopus laevis GN=ube2d4 PE=1
SV=1
Length = 147
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 10 MDVMKLMMSDYNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFV 69
MD+ + + + + + L + GP +S ++GGV+ + + P YP+K P + F
Sbjct: 11 MDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFT 70
Query: 70 NKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMM 129
KIYHPN++ +GS+CLD++ WSP + + S LL PNP DPL + A
Sbjct: 71 TKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPEIAHTYK 128
Query: 130 KDRKQYDQKVKEYCERYA 147
DR++Y++ +E+ ++YA
Sbjct: 129 ADREKYNRLAREWTQKYA 146
>sp|Q9FI61|UBC27_ARATH Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana GN=UBC27
PE=2 SV=1
Length = 192
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Query: 26 NDGLNEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVC 85
+D L GP + YEGG ++I + +PD YP++ P + F K++HPN+ SG++C
Sbjct: 29 SDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAIC 88
Query: 86 LDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVKEYCER 145
LD++ WSP L S + LL P P DP + A MK+ + + + + E
Sbjct: 89 LDILKDQWSPALTLKTALVS-IQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTET 147
Query: 146 YAKKENI---VNSTADEESGDEEI-SEEESESSDDDIA 179
+AKK ++ V + GD ++ S ES D+++A
Sbjct: 148 FAKKSSLEEKVKRLVEMGFGDAQVRSAIESSGGDENLA 185
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D + + + +N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ FV+K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 1 MSSPSKRRDMDVMKLMMSD----YNVETINDGLNEFNVEFHGPKESLYEGGVWKIRVELP 56
MS+P++RR M K + D + + + +N GP+ + +E G +K+ +E
Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFT 60
Query: 57 DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNP 116
+ YP K P++ FV+K++HPNV GS+CLD++ WSP +D+ +I S + LL PNP
Sbjct: 61 EEYPNKPPTVRFVSKMFHPNV-YADGSICLDILQNRWSPTYDVSSILTS-IQSLLDEPNP 118
Query: 117 SDPLNGDAASLMMKDRKQYDQKVKEYCER 145
+ P N AA L +++++Y+++V E+
Sbjct: 119 NSPANSQAAQLYQENKREYEKRVSAIVEQ 147
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,261,006
Number of Sequences: 539616
Number of extensions: 3248541
Number of successful extensions: 19313
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 17868
Number of HSP's gapped (non-prelim): 936
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)