BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030040
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1PF50|EDA2_ARATH Probable serine protease EDA2 OS=Arabidopsis thaliana GN=EDA2 PE=2
SV=2
Length = 489
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 109/182 (59%), Positives = 143/182 (78%)
Query: 1 MFDAAELEIEGDFLYFLADAAVTAFQYGNPDKLCTPLVEAKNAGEDLVDAYAKFVKEYYL 60
+F+A EL+++ DFLY ADAAV AFQYGNPDKLC PLVEAK G DLV Y+ +V+EY +
Sbjct: 251 LFNATELDVDADFLYLTADAAVMAFQYGNPDKLCVPLVEAKKNGSDLVVTYSTYVREYCM 310
Query: 61 GSFGASVQTYNQKRLKNTAVTDQSADRLWWFQVCTEVAFFQVAPANDSVRSSKVDTRYHL 120
+G V+TYN+K L+NT VT SA RLWWFQ CTE+ +FQVAP DSVRS +++T +HL
Sbjct: 311 RIWGLRVRTYNRKHLRNTVVTADSAYRLWWFQACTELGYFQVAPKYDSVRSHQINTTFHL 370
Query: 121 DLCKNVFGEGIYPDVDSTNIYYGGTKIAGSKIVFTNGSQDPWRHASKQTSSPDSKYFMII 180
DLCK++FG+ +YP VD+TN+YYGG ++A +KI+FTNGS+DPWRHASKQ S+ + ++I
Sbjct: 371 DLCKSLFGKDVYPKVDATNLYYGGDRLAATKIIFTNGSEDPWRHASKQNSTHEMPSYIIK 430
Query: 181 FR 182
R
Sbjct: 431 CR 432
>sp|Q9NQE7|TSSP_HUMAN Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2
Length = 514
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 85 ADRLWWFQVCTEVAFFQVAPANDSVRSSKVDTRYHLDLCKNVFGEG---IYPDVDSTNIY 141
DR W +Q CTE F+ S LDLC+ VFG + V TN Y
Sbjct: 369 GDRQWLYQTCTEFGFYVTCENPRCPFSQLPALPSQLDLCEQVFGLSALSVAQAVAQTNSY 428
Query: 142 YGGTKIAGSKIVFTNGSQDPWRHASKQTSSPDSKYFMIIFRT 183
YGG +K++F NG DPW H T + S ++ RT
Sbjct: 429 YGGQTPGANKVLFVNGDTDPW-HVLSVTQALGSSESTLLIRT 469
>sp|Q9QXE5|TSSP_MOUSE Thymus-specific serine protease OS=Mus musculus GN=Prss16 PE=2 SV=1
Length = 509
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 85 ADRLWWFQVCTEVAFFQVAPANDSVRSSKVDTRYHLDLCKNVFG---EGIYPDVDSTNIY 141
DR W +Q CTE F+ S + L+LC+ VFG + V TN Y
Sbjct: 368 GDRQWLYQTCTEFGFYVTCEGLQCPFSQLPALPFQLELCEQVFGLSPASVAQAVAQTNSY 427
Query: 142 YGGTKIAGSKIVFTNGSQDPW 162
YGG ++++F NG DPW
Sbjct: 428 YGGQSPGATQVLFVNGDTDPW 448
>sp|P34528|YM67_CAEEL Putative serine protease K12H4.7 OS=Caenorhabditis elegans
GN=K12H4.7 PE=3 SV=2
Length = 510
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 61 GSFGASVQTYNQ--KRLKNTAVTDQSADRLWWFQVCTEVAFFQ------VAPANDSVRSS 112
G FG + YN +K+ + +DR W +Q CTE ++Q P V S
Sbjct: 341 GYFGCNDIDYNGFISFMKDETFGEAQSDRAWVWQTCTEFGYYQSTSSATAGPWFGGV--S 398
Query: 113 KVDTRYHLDLCKNVFG-----EGIYPDVDSTNIYYGGT-KIAGSKIVFTNGSQDPWRHAS 166
+ +Y++D C ++G + + VD TN YYGG + +I+ NG DPW
Sbjct: 399 NLPAQYYIDECTAIYGAAYNSQEVQTSVDYTNQYYGGRDNLNTDRILLPNGDIDPWHALG 458
Query: 167 KQTSS 171
K TSS
Sbjct: 459 KLTSS 463
>sp|P90893|YM9I_CAEEL Putative serine protease F56F10.1 OS=Caenorhabditis elegans
GN=F56F10.1 PE=1 SV=2
Length = 540
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 77 NTAVTDQSADRLWWFQVCTEVAFFQVAPANDSVRSSKVDTRYHLDLCKNVFGEG-----I 131
N D +A R W + C E+ F Q ++V + V +D+C ++FG+ I
Sbjct: 364 NVLGPDGAAARGWMWLCCNEIGFLQTTNQGNNVFGTGVPLNLFIDMCTDMFGDSMKMSQI 423
Query: 132 YPDVDSTNIYYGGTKI-AGSKIVFTNGSQDPWR 163
+ YYGG + +V NGS DPW
Sbjct: 424 MGGNKKSQNYYGGADFYNATNVVLPNGSLDPWH 456
>sp|Q9EPB1|DPP2_RAT Dipeptidyl peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1
Length = 500
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 78 TAVTDQSADRLWWFQVCTEVAF-FQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIYPDVD 136
T S R W +Q CTE+ F D C + +G PD
Sbjct: 346 TGCGTGSNARAWDYQACTEINLTFDSNNVTDMFPEIPFSDELRQQYCLDTWGVWPRPDWL 405
Query: 137 STNIYYGGTKIAGSKIVFTNGSQDPWRHASKQ 168
T+ ++GG A S I+F+NG DPW Q
Sbjct: 406 QTS-FWGGDLKAASNIIFSNGDLDPWAGGGIQ 436
>sp|Q9UHL4|DPP2_HUMAN Dipeptidyl peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3
Length = 492
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 22/87 (25%)
Query: 87 RLWWFQVCTEVAF----------FQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIYPDVD 136
R W +Q CTE+ F P D +R RY LD G++P D
Sbjct: 345 RAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQ-----RYCLDTW------GVWPRPD 393
Query: 137 -STNIYYGGTKIAGSKIVFTNGSQDPW 162
++GG A S I+F+NG+ DPW
Sbjct: 394 WLLTSFWGGDLRAASNIIFSNGNLDPW 420
>sp|Q9ET22|DPP2_MOUSE Dipeptidyl peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=2
Length = 506
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 78 TAVTDQSADRLWWFQVCTEVAF-FQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIYPDVD 136
T S R W +Q CTE+ F D C + +G ++P D
Sbjct: 346 TGCGTGSDARAWDYQACTEINLTFDSNNVTDMFPEIPFSEELRQQYCLDTWG--VWPRQD 403
Query: 137 STNI-YYGGTKIAGSKIVFTNGSQDPWRHASKQTS 170
++GG A S I+F+NG DPW Q++
Sbjct: 404 WLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQSN 438
>sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2
Length = 491
Score = 37.4 bits (85), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 89 WWFQVCTEVAF-FQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIYPDVDSTNIYYGGTKI 147
W FQ CTE+ F +D D + + C N +G + P YGG I
Sbjct: 357 WSFQACTEMVMPFCTNGIDDMFEPFLWDLEKYSNDCFNQWG--VKPRPHWMTTMYGGKNI 414
Query: 148 AG-SKIVFTNGSQDPW 162
+ S I+F+NG DPW
Sbjct: 415 SSHSNIIFSNGELDPW 430
>sp|Q5RBU7|PCP_PONAB Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1
Length = 496
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 89 WWFQVCTEVAF-FQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIYPDVDSTNIYYGGTKI 147
W +Q CTEV F +D + + D C +G + P YGG I
Sbjct: 359 WSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWG--VRPRPSWITTMYGGKNI 416
Query: 148 AG-SKIVFTNGSQDPW 162
+ + IVF+NG DPW
Sbjct: 417 SSHTNIVFSNGELDPW 432
>sp|P42785|PCP_HUMAN Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1
Length = 496
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 89 WWFQVCTEVAF-FQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIYPDVDSTNIYYGGTKI 147
W +Q CTEV F +D + + D C +G + P YGG I
Sbjct: 359 WSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWG--VRPRPSWITTMYGGKNI 416
Query: 148 AG-SKIVFTNGSQDPW 162
+ + IVF+NG DPW
Sbjct: 417 SSHTNIVFSNGELDPW 432
>sp|Q2TA14|PCP_BOVIN Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1
Length = 499
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 89 WWFQVCTEVAFFQVAPA-NDSVRSSKVDTRYHLDLCKNVFGEGIYPDVDSTNIYYGGTKI 147
W +Q CTE+ + +D + + + D C +G + P YGG I
Sbjct: 362 WSYQACTEMVMPTCSDGVDDMFEPHSWNMKEYSDDCFKQWG--VRPRPSWIPTMYGGKNI 419
Query: 148 AG-SKIVFTNGSQDPW 162
+ + I+F+NG DPW
Sbjct: 420 SSHTNIIFSNGELDPW 435
>sp|A0QSH5|Y1481_MYCS2 Putative S-adenosyl-L-methionine-dependent methyltransferase
MSMEG_1481/MSMEI_1445 OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=MSMEG_1481 PE=3 SV=1
Length = 304
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 108 SVRSSKVDTRYHLDLCKNVFGEGIYP---------DVDSTNIYYGGTKIAGSKIVFTNGS 158
S R S++ T YH D+ + G G DVD ++++YGG + A + + +G
Sbjct: 203 SARGSRLATEYHPDITSTLRGRGQAMSERWRDHGFDVDLSDLWYGGDRNAADEYLAGHGW 262
Query: 159 Q 159
Q
Sbjct: 263 Q 263
>sp|B0UR84|DNAK_METS4 Chaperone protein DnaK OS=Methylobacterium sp. (strain 4-46)
GN=dnaK PE=3 SV=1
Length = 639
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 31 DKLCTPLVEAKNAGEDLVDAYAKFVKEY 58
DK LVE KN GE LV A K VKEY
Sbjct: 521 DKKRRELVEVKNQGESLVHATEKSVKEY 548
>sp|B8IHL3|DNAK_METNO Chaperone protein DnaK OS=Methylobacterium nodulans (strain ORS2060
/ LMG 21967) GN=dnaK PE=3 SV=1
Length = 637
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 31 DKLCTPLVEAKNAGEDLVDAYAKFVKEY 58
DK LVE KN GE L+ A K VKEY
Sbjct: 521 DKKRRELVEVKNQGESLIHATEKSVKEY 548
>sp|P13433|RPOM_YEAST DNA-directed RNA polymerase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPO41 PE=1
SV=2
Length = 1351
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 81 TDQSADRLWWFQVCTEVAFFQVAPANDSVRSSKVDTRYHLDLCKNVFGEGIY 132
+D S R W QV T +A S RS++ DT Y L++ + GE +Y
Sbjct: 774 SDPSILRAWKLQVKT------IANKFSSDRSNRCDTNYKLEIARAFLGEKLY 819
>sp|Q58195|Y785_METJA Uncharacterized protein MJ0785 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0785 PE=4 SV=1
Length = 375
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 42 NAGEDLVDAYAKFVKEYYLGSFGASVQTYNQKRLKNTAVTDQSADRLWWFQVCTEVAFFQ 101
NAG DL + K +K+Y + + +++T N+ K ++ DR+ +VC V +
Sbjct: 169 NAGADLTEESIKELKKYGIDTICCNLETINENLFKKVKPGEELEDRI---RVCKLVNKYD 225
Query: 102 VAPAND---SVRSSKVDTRYHLDLCKNVFGEGIYP 133
+ + + S D HL KN G P
Sbjct: 226 IELSTGLLIGIGESYEDRVEHLFYLKNELNVGEIP 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,070,973
Number of Sequences: 539616
Number of extensions: 2667734
Number of successful extensions: 5673
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5654
Number of HSP's gapped (non-prelim): 21
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)