Query 030042
Match_columns 184
No_of_seqs 123 out of 1051
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 12:03:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 8.7E-28 3E-32 179.3 14.7 175 4-182 22-200 (407)
2 2vou_A 2,6-dihydroxypyridine h 99.9 6.8E-26 2.3E-30 168.6 18.4 166 1-181 1-169 (397)
3 2x3n_A Probable FAD-dependent 99.9 7.4E-26 2.5E-30 168.4 17.1 170 1-175 2-176 (399)
4 2qa2_A CABE, polyketide oxygen 99.9 2.1E-25 7.1E-30 170.1 17.4 164 4-178 11-179 (499)
5 3ihg_A RDME; flavoenzyme, anth 99.9 6.5E-26 2.2E-30 174.5 14.7 177 1-178 1-196 (535)
6 3c96_A Flavin-containing monoo 99.9 2.5E-25 8.4E-30 166.2 17.4 166 4-174 3-178 (410)
7 2qa1_A PGAE, polyketide oxygen 99.9 1.8E-25 6.1E-30 170.5 16.8 164 4-178 10-178 (500)
8 2xdo_A TETX2 protein; tetracyc 99.9 6.1E-25 2.1E-29 163.5 16.9 170 4-182 25-199 (398)
9 3fmw_A Oxygenase; mithramycin, 99.9 2.2E-25 7.5E-30 172.2 14.9 169 4-179 48-221 (570)
10 3nix_A Flavoprotein/dehydrogen 99.9 7E-25 2.4E-29 164.2 16.5 172 1-177 1-178 (421)
11 2r0c_A REBC; flavin adenine di 99.9 1.5E-24 5E-29 167.3 18.6 169 4-177 25-208 (549)
12 3alj_A 2-methyl-3-hydroxypyrid 99.9 8.9E-25 3E-29 161.7 16.5 165 3-181 9-177 (379)
13 2dkh_A 3-hydroxybenzoate hydro 99.9 6.3E-24 2.2E-28 166.3 18.5 172 5-177 32-223 (639)
14 3oz2_A Digeranylgeranylglycero 99.9 2.1E-24 7.2E-29 160.0 14.7 166 3-176 2-173 (397)
15 4hb9_A Similarities with proba 99.9 7.3E-24 2.5E-28 157.9 17.7 165 6-175 2-176 (412)
16 1pn0_A Phenol 2-monooxygenase; 99.9 5.5E-24 1.9E-28 167.0 17.0 173 4-177 7-242 (665)
17 3i3l_A Alkylhalidase CMLS; fla 99.9 8E-23 2.7E-27 158.3 17.6 169 3-175 21-198 (591)
18 3e1t_A Halogenase; flavoprotei 99.9 3.1E-23 1.1E-27 158.8 14.6 168 4-174 6-181 (512)
19 3cgv_A Geranylgeranyl reductas 99.9 4E-23 1.4E-27 153.4 14.2 164 3-175 2-172 (397)
20 1k0i_A P-hydroxybenzoate hydro 99.9 1.4E-23 4.6E-28 156.0 10.4 164 5-174 2-172 (394)
21 3atr_A Conserved archaeal prot 99.8 7.2E-21 2.5E-25 143.8 11.2 158 4-175 5-172 (453)
22 2aqj_A Tryptophan halogenase, 99.8 3.5E-20 1.2E-24 142.7 14.8 171 1-175 1-233 (538)
23 2pyx_A Tryptophan halogenase; 99.8 6.2E-20 2.1E-24 141.0 15.8 171 1-175 3-244 (526)
24 2gmh_A Electron transfer flavo 99.8 1.5E-19 5.2E-24 140.2 17.5 158 5-171 35-223 (584)
25 2e4g_A Tryptophan halogenase; 99.8 1.1E-19 3.6E-24 140.3 15.4 171 1-175 21-263 (550)
26 2weu_A Tryptophan 5-halogenase 99.8 1.9E-19 6.6E-24 137.9 13.9 166 5-174 2-240 (511)
27 2oln_A NIKD protein; flavoprot 99.8 4.7E-18 1.6E-22 126.3 15.3 173 1-179 1-223 (397)
28 3v76_A Flavoprotein; structura 99.8 3.9E-19 1.3E-23 132.7 8.3 150 1-174 23-207 (417)
29 2bry_A NEDD9 interacting prote 99.8 1.4E-18 4.7E-23 132.6 10.0 139 5-172 92-237 (497)
30 3dme_A Conserved exported prot 99.8 2.8E-17 9.7E-22 120.7 16.7 71 101-174 144-220 (369)
31 1y56_B Sarcosine oxidase; dehy 99.8 8.1E-18 2.8E-22 124.4 11.4 73 102-179 144-222 (382)
32 3c4a_A Probable tryptophan hyd 99.8 3.5E-19 1.2E-23 131.8 4.0 142 6-171 1-148 (381)
33 3dje_A Fructosyl amine: oxygen 99.8 3.8E-18 1.3E-22 128.4 9.6 61 102-166 156-222 (438)
34 3nyc_A D-arginine dehydrogenas 99.7 2E-18 6.9E-23 127.4 7.7 75 100-179 147-225 (381)
35 2gag_B Heterotetrameric sarcos 99.7 7.1E-18 2.4E-22 125.5 9.8 74 102-179 169-245 (405)
36 3ps9_A TRNA 5-methylaminomethy 99.7 1.9E-17 6.6E-22 130.6 12.6 71 100-174 410-483 (676)
37 2gf3_A MSOX, monomeric sarcosi 99.7 1.6E-16 5.5E-21 117.6 15.5 169 5-178 3-219 (389)
38 3pvc_A TRNA 5-methylaminomethy 99.7 2.1E-17 7.1E-22 130.6 11.3 71 100-174 405-479 (689)
39 1yvv_A Amine oxidase, flavin-c 99.7 4.6E-17 1.6E-21 118.3 12.1 148 5-170 2-167 (336)
40 4a9w_A Monooxygenase; baeyer-v 99.7 4.7E-17 1.6E-21 118.9 12.2 129 4-166 2-133 (357)
41 2gqf_A Hypothetical protein HI 99.7 4.6E-17 1.6E-21 121.1 11.5 152 3-175 2-189 (401)
42 2i0z_A NAD(FAD)-utilizing dehy 99.7 4.8E-17 1.6E-21 122.7 11.6 163 4-175 25-212 (447)
43 3c4n_A Uncharacterized protein 99.7 1.6E-17 5.6E-22 123.8 8.9 170 4-178 35-251 (405)
44 3da1_A Glycerol-3-phosphate de 99.7 1.5E-16 5E-21 123.0 12.8 69 103-174 166-242 (561)
45 2zbw_A Thioredoxin reductase; 99.7 6.1E-17 2.1E-21 117.7 9.8 119 1-165 1-121 (335)
46 1ryi_A Glycine oxidase; flavop 99.7 5.3E-17 1.8E-21 120.0 9.6 73 102-179 159-234 (382)
47 2uzz_A N-methyl-L-tryptophan o 99.7 5.3E-16 1.8E-20 114.2 14.5 156 5-166 2-205 (372)
48 4fk1_A Putative thioredoxin re 99.7 5.8E-16 2E-20 111.2 12.8 113 2-165 3-117 (304)
49 2gv8_A Monooxygenase; FMO, FAD 99.7 2.7E-16 9.2E-21 118.6 11.1 153 4-166 5-178 (447)
50 2ywl_A Thioredoxin reductase r 99.7 1.3E-15 4.3E-20 101.4 13.1 116 6-174 2-119 (180)
51 3gwf_A Cyclohexanone monooxyge 99.7 1.7E-16 5.9E-21 122.0 9.9 135 4-166 7-148 (540)
52 3axb_A Putative oxidoreductase 99.7 6.9E-17 2.3E-21 121.8 7.5 74 102-179 176-269 (448)
53 3nlc_A Uncharacterized protein 99.7 4.2E-16 1.4E-20 119.6 11.9 157 5-174 107-290 (549)
54 1qo8_A Flavocytochrome C3 fuma 99.7 6.4E-16 2.2E-20 119.7 13.0 156 4-171 120-318 (566)
55 1pj5_A N,N-dimethylglycine oxi 99.7 1.7E-16 5.8E-21 127.8 9.2 75 101-179 145-222 (830)
56 1rp0_A ARA6, thiazole biosynth 99.7 1.1E-15 3.9E-20 108.7 11.9 131 4-167 38-193 (284)
57 3ab1_A Ferredoxin--NADP reduct 99.7 2.6E-16 8.9E-21 115.5 8.8 118 4-166 13-132 (360)
58 1y0p_A Fumarate reductase flav 99.7 2.4E-15 8.3E-20 116.6 13.9 153 4-169 125-321 (571)
59 2cul_A Glucose-inhibited divis 99.7 6.9E-16 2.3E-20 106.8 9.6 125 3-168 1-128 (232)
60 2qcu_A Aerobic glycerol-3-phos 99.6 3.5E-15 1.2E-19 114.1 13.5 67 102-172 144-219 (501)
61 3uox_A Otemo; baeyer-villiger 99.6 2.6E-16 8.7E-21 121.2 7.2 136 3-166 7-148 (545)
62 4ap3_A Steroid monooxygenase; 99.6 4.6E-16 1.6E-20 119.9 8.2 134 4-165 20-159 (549)
63 3i6d_A Protoporphyrinogen oxid 99.6 1.9E-15 6.6E-20 114.4 11.0 55 108-166 236-290 (470)
64 3jsk_A Cypbp37 protein; octame 99.6 2.3E-15 7.8E-20 108.8 10.5 133 4-166 78-252 (344)
65 1w4x_A Phenylacetone monooxyge 99.6 7.6E-16 2.6E-20 118.7 8.3 137 4-166 15-155 (542)
66 3f8d_A Thioredoxin reductase ( 99.6 5.4E-15 1.9E-19 106.6 12.1 109 5-165 15-125 (323)
67 3lzw_A Ferredoxin--NADP reduct 99.6 2.6E-15 8.9E-20 108.8 10.1 115 4-164 6-122 (332)
68 1vdc_A NTR, NADPH dependent th 99.6 3E-15 1E-19 108.6 9.9 114 3-166 6-125 (333)
69 3ces_A MNMG, tRNA uridine 5-ca 99.6 1.4E-15 4.7E-20 118.0 8.0 149 4-168 27-184 (651)
70 4gcm_A TRXR, thioredoxin reduc 99.6 1.1E-14 3.7E-19 104.9 11.9 38 1-38 2-39 (312)
71 3fbs_A Oxidoreductase; structu 99.6 1.3E-14 4.3E-19 103.6 12.1 109 5-166 2-113 (297)
72 4at0_A 3-ketosteroid-delta4-5a 99.6 1.6E-14 5.4E-19 110.7 13.4 40 4-43 40-79 (510)
73 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 1.8E-14 6E-19 105.1 12.9 143 6-164 2-164 (342)
74 2rgh_A Alpha-glycerophosphate 99.6 4.5E-15 1.5E-19 115.0 9.6 68 103-173 184-259 (571)
75 2zxi_A TRNA uridine 5-carboxym 99.6 6E-15 2E-19 114.1 9.5 147 4-166 26-181 (637)
76 4a5l_A Thioredoxin reductase; 99.6 2.3E-14 8E-19 103.1 12.0 119 1-165 1-121 (314)
77 3cp8_A TRNA uridine 5-carboxym 99.6 6E-15 2.1E-19 114.3 9.1 147 4-166 20-175 (641)
78 3d1c_A Flavin-containing putat 99.6 4.4E-15 1.5E-19 109.1 7.5 134 3-165 2-143 (369)
79 2q0l_A TRXR, thioredoxin reduc 99.6 4.3E-14 1.5E-18 101.6 12.2 111 6-166 2-115 (311)
80 1fl2_A Alkyl hydroperoxide red 99.6 3.2E-14 1.1E-18 102.2 11.2 114 5-166 1-116 (310)
81 2gjc_A Thiazole biosynthetic e 99.6 4.2E-14 1.4E-18 101.6 11.5 134 5-169 65-243 (326)
82 1trb_A Thioredoxin reductase; 99.6 4.1E-14 1.4E-18 102.1 11.4 114 1-165 1-116 (320)
83 3itj_A Thioredoxin reductase 1 99.6 3.4E-14 1.2E-18 103.1 11.0 113 4-165 21-142 (338)
84 2q7v_A Thioredoxin reductase; 99.5 1E-13 3.5E-18 100.3 12.5 113 5-166 8-124 (325)
85 3s5w_A L-ornithine 5-monooxyge 99.5 1.2E-13 4.1E-18 104.6 13.0 149 5-166 30-193 (463)
86 3cty_A Thioredoxin reductase; 99.5 8.1E-14 2.8E-18 100.6 11.4 110 5-166 16-127 (319)
87 2xve_A Flavin-containing monoo 99.5 4E-14 1.4E-18 107.2 10.0 146 6-166 3-167 (464)
88 1d4d_A Flavocytochrome C fumar 99.5 8.8E-14 3E-18 107.8 12.0 154 5-169 126-321 (572)
89 1kf6_A Fumarate reductase flav 99.5 6.9E-14 2.4E-18 108.9 11.3 163 1-171 1-203 (602)
90 2wdq_A Succinate dehydrogenase 99.5 1.9E-13 6.6E-18 106.2 13.6 37 4-40 6-42 (588)
91 1hyu_A AHPF, alkyl hydroperoxi 99.5 1.3E-13 4.6E-18 105.8 11.6 115 4-166 211-327 (521)
92 2a87_A TRXR, TR, thioredoxin r 99.5 1.7E-13 5.7E-18 99.6 11.1 112 4-166 13-127 (335)
93 4dgk_A Phytoene dehydrogenase; 99.5 3.9E-13 1.3E-17 102.7 12.9 62 108-172 222-285 (501)
94 2h88_A Succinate dehydrogenase 99.5 3.2E-13 1.1E-17 105.3 12.5 156 4-167 17-219 (621)
95 1chu_A Protein (L-aspartate ox 99.5 1.4E-13 4.9E-18 105.9 10.1 37 4-41 7-43 (540)
96 2bs2_A Quinol-fumarate reducta 99.5 8.7E-13 3E-17 103.5 13.9 40 1-40 1-40 (660)
97 1rsg_A FMS1 protein; FAD bindi 99.5 7.3E-13 2.5E-17 101.6 12.7 57 106-165 201-257 (516)
98 3lov_A Protoporphyrinogen oxid 99.5 7.7E-13 2.6E-17 100.4 12.1 64 3-66 2-82 (475)
99 3ka7_A Oxidoreductase; structu 99.5 1E-12 3.5E-17 98.3 12.0 39 6-44 1-39 (425)
100 2ivd_A PPO, PPOX, protoporphyr 99.5 1.7E-12 5.9E-17 98.6 13.4 63 4-66 15-92 (478)
101 3l8k_A Dihydrolipoyl dehydroge 99.4 3.4E-13 1.2E-17 102.3 9.4 42 1-43 1-42 (466)
102 1s3e_A Amine oxidase [flavin-c 99.4 5.5E-12 1.9E-16 96.8 15.9 42 1-43 1-42 (520)
103 3k7m_X 6-hydroxy-L-nicotine ox 99.4 3.4E-12 1.2E-16 95.7 14.2 38 6-43 2-39 (431)
104 3o0h_A Glutathione reductase; 99.4 4.5E-13 1.5E-17 102.0 9.4 44 119-166 246-289 (484)
105 3ihm_A Styrene monooxygenase A 99.4 2.4E-14 8.1E-19 107.5 2.1 141 4-168 21-170 (430)
106 3nks_A Protoporphyrinogen oxid 99.4 9.5E-13 3.2E-17 99.9 10.5 40 5-44 2-43 (477)
107 2a8x_A Dihydrolipoyl dehydroge 99.4 2.8E-13 9.6E-18 102.6 7.2 143 4-167 2-148 (464)
108 3nrn_A Uncharacterized protein 99.4 6.4E-13 2.2E-17 99.4 9.1 38 7-44 2-39 (421)
109 4gde_A UDP-galactopyranose mut 99.4 9.2E-13 3.2E-17 100.8 10.1 52 107-164 222-275 (513)
110 2e5v_A L-aspartate oxidase; ar 99.4 1.3E-12 4.5E-17 99.1 10.4 31 7-37 1-31 (472)
111 1ojt_A Surface protein; redox- 99.4 4.3E-13 1.5E-17 102.1 7.6 39 5-43 6-44 (482)
112 3kd9_A Coenzyme A disulfide re 99.4 4.6E-13 1.6E-17 101.1 7.3 106 4-165 2-114 (449)
113 1v59_A Dihydrolipoamide dehydr 99.4 5E-13 1.7E-17 101.6 7.4 144 4-165 4-157 (478)
114 3r9u_A Thioredoxin reductase; 99.4 2.9E-12 9.9E-17 92.0 11.0 113 3-165 2-118 (315)
115 2vvm_A Monoamine oxidase N; FA 99.4 1.1E-11 3.8E-16 94.5 14.6 58 6-63 40-112 (495)
116 1c0p_A D-amino acid oxidase; a 99.4 8.4E-13 2.9E-17 96.9 6.4 36 4-39 5-40 (363)
117 1dxl_A Dihydrolipoamide dehydr 99.4 5.8E-13 2E-17 101.1 5.5 40 4-43 5-44 (470)
118 3lxd_A FAD-dependent pyridine 99.4 2.8E-12 9.6E-17 95.8 8.9 110 4-165 8-119 (415)
119 1q1r_A Putidaredoxin reductase 99.4 2.5E-12 8.4E-17 96.6 8.4 113 1-166 1-115 (431)
120 3kkj_A Amine oxidase, flavin-c 99.3 1.3E-12 4.5E-17 91.9 6.1 40 5-44 2-41 (336)
121 2qae_A Lipoamide, dihydrolipoy 99.3 3.9E-12 1.3E-16 96.5 8.8 39 5-43 2-40 (468)
122 3gyx_A Adenylylsulfate reducta 99.3 3.3E-12 1.1E-16 100.2 8.1 37 4-40 21-63 (662)
123 1jnr_A Adenylylsulfate reducta 99.3 1.6E-11 5.5E-16 96.4 11.8 36 5-40 22-61 (643)
124 1zmd_A Dihydrolipoyl dehydroge 99.3 3.3E-12 1.1E-16 97.0 7.5 40 4-43 5-44 (474)
125 1ebd_A E3BD, dihydrolipoamide 99.3 4.4E-12 1.5E-16 95.9 8.2 37 4-41 2-38 (455)
126 2yqu_A 2-oxoglutarate dehydrog 99.3 5.4E-12 1.8E-16 95.4 8.1 39 5-43 1-39 (455)
127 3g3e_A D-amino-acid oxidase; F 99.3 4.9E-13 1.7E-17 97.8 2.1 34 7-40 2-41 (351)
128 3urh_A Dihydrolipoyl dehydroge 99.3 9.1E-13 3.1E-17 100.5 3.6 41 3-43 23-63 (491)
129 2jae_A L-amino acid oxidase; o 99.3 2.5E-11 8.5E-16 92.5 11.1 40 4-43 10-49 (489)
130 3iwa_A FAD-dependent pyridine 99.3 7.9E-12 2.7E-16 94.9 8.3 36 5-40 3-40 (472)
131 1zk7_A HGII, reductase, mercur 99.3 1.1E-11 3.6E-16 94.1 8.4 40 1-42 1-40 (467)
132 3klj_A NAD(FAD)-dependent dehy 99.3 4.6E-11 1.6E-15 88.4 11.6 109 4-165 8-116 (385)
133 2gqw_A Ferredoxin reductase; f 99.3 3.1E-11 1E-15 90.1 10.1 107 4-166 6-114 (408)
134 4b63_A L-ornithine N5 monooxyg 99.3 1.3E-12 4.6E-17 99.7 2.9 64 103-166 141-215 (501)
135 3oc4_A Oxidoreductase, pyridin 99.3 1.5E-11 5.2E-16 92.9 8.5 110 6-165 3-115 (452)
136 3sx6_A Sulfide-quinone reducta 99.3 5.5E-11 1.9E-15 89.4 11.5 111 1-167 1-114 (437)
137 3qfa_A Thioredoxin reductase 1 99.3 5.6E-12 1.9E-16 96.8 6.0 35 4-38 31-65 (519)
138 1y56_A Hypothetical protein PH 99.3 1.5E-11 5E-16 93.9 8.1 109 5-166 108-220 (493)
139 4gut_A Lysine-specific histone 99.3 1.7E-11 5.8E-16 97.8 8.5 38 5-42 336-373 (776)
140 1xdi_A RV3303C-LPDA; reductase 99.3 9.4E-12 3.2E-16 95.1 6.8 37 5-42 2-41 (499)
141 4dna_A Probable glutathione re 99.3 1.5E-11 5.2E-16 93.1 7.8 41 1-42 1-41 (463)
142 3ic9_A Dihydrolipoamide dehydr 99.3 8.4E-13 2.9E-17 100.7 1.0 41 1-42 4-44 (492)
143 3ef6_A Toluene 1,2-dioxygenase 99.2 8.2E-11 2.8E-15 87.8 11.6 107 6-165 3-111 (410)
144 3h8l_A NADH oxidase; membrane 99.2 1.4E-11 4.7E-16 91.9 6.0 33 6-38 2-37 (409)
145 2bc0_A NADH oxidase; flavoprot 99.2 3.6E-11 1.2E-15 91.7 8.4 113 4-166 34-150 (490)
146 3lad_A Dihydrolipoamide dehydr 99.2 4.8E-11 1.6E-15 90.7 8.8 38 4-41 2-39 (476)
147 1xhc_A NADH oxidase /nitrite r 99.2 1.1E-10 3.7E-15 86.0 10.4 105 6-165 9-113 (367)
148 3p1w_A Rabgdi protein; GDI RAB 99.2 1.2E-10 4.1E-15 87.9 10.8 41 4-44 19-59 (475)
149 2hqm_A GR, grase, glutathione 99.2 6.4E-11 2.2E-15 90.1 9.4 35 4-38 10-44 (479)
150 3ics_A Coenzyme A-disulfide re 99.2 2.1E-10 7.2E-15 89.3 12.4 113 4-165 35-152 (588)
151 2eq6_A Pyruvate dehydrogenase 99.2 3.1E-11 1.1E-15 91.5 7.4 36 3-38 4-39 (464)
152 3cgb_A Pyridine nucleotide-dis 99.2 1.2E-10 4.1E-15 88.6 10.4 113 5-166 36-153 (480)
153 2v3a_A Rubredoxin reductase; a 99.2 3.8E-11 1.3E-15 88.8 6.8 37 1-38 1-39 (384)
154 3fg2_P Putative rubredoxin red 99.2 1.9E-10 6.5E-15 85.7 10.2 107 6-165 2-110 (404)
155 3dgz_A Thioredoxin reductase 2 99.2 1.7E-11 5.8E-16 93.5 4.6 34 4-37 5-38 (488)
156 3hyw_A Sulfide-quinone reducta 99.2 5.9E-11 2E-15 89.1 7.4 104 6-164 3-108 (430)
157 3dk9_A Grase, GR, glutathione 99.2 1.4E-10 4.9E-15 88.1 9.3 34 4-37 19-52 (478)
158 3h28_A Sulfide-quinone reducta 99.2 7.9E-11 2.7E-15 88.4 7.8 105 6-165 3-109 (430)
159 1m6i_A Programmed cell death p 99.2 1.4E-11 4.9E-16 94.0 3.7 132 4-165 10-144 (493)
160 3ntd_A FAD-dependent pyridine 99.1 1.4E-10 4.8E-15 89.9 8.9 111 6-165 2-117 (565)
161 1mo9_A ORF3; nucleotide bindin 99.1 3E-10 1E-14 87.3 10.5 40 4-43 42-81 (523)
162 2cdu_A NADPH oxidase; flavoenz 99.1 2.4E-11 8.3E-16 91.7 4.4 113 6-166 1-118 (452)
163 1nhp_A NADH peroxidase; oxidor 99.1 2.5E-10 8.6E-15 86.1 9.7 111 6-166 1-116 (447)
164 2r9z_A Glutathione amide reduc 99.1 1.6E-10 5.5E-15 87.5 8.5 39 1-41 1-39 (463)
165 1fec_A Trypanothione reductase 99.1 4.1E-10 1.4E-14 85.9 10.6 32 4-35 2-34 (490)
166 2v3a_A Rubredoxin reductase; a 99.1 5.8E-10 2E-14 82.5 11.1 108 5-174 145-254 (384)
167 3vrd_B FCCB subunit, flavocyto 99.1 8.3E-10 2.8E-14 82.1 10.7 105 6-166 3-109 (401)
168 2yqu_A 2-oxoglutarate dehydrog 99.1 1.1E-09 3.9E-14 82.7 11.4 98 6-166 168-265 (455)
169 1ges_A Glutathione reductase; 99.1 1.4E-09 4.7E-14 82.2 11.5 36 1-37 1-36 (450)
170 2wpf_A Trypanothione reductase 99.1 2.9E-10 9.9E-15 86.8 7.5 32 5-36 7-39 (495)
171 1lvl_A Dihydrolipoamide dehydr 99.1 9.2E-10 3.1E-14 83.3 9.7 39 3-42 3-41 (458)
172 3dgh_A TRXR-1, thioredoxin red 99.1 1.2E-09 4.1E-14 83.2 10.1 34 4-37 8-41 (483)
173 2gag_A Heterotetrameric sarcos 99.0 1.9E-09 6.4E-14 88.3 11.2 39 5-43 128-166 (965)
174 2eq6_A Pyruvate dehydrogenase 99.0 2.4E-09 8.3E-14 81.1 10.5 98 6-166 170-272 (464)
175 3fpz_A Thiazole biosynthetic e 99.0 2.5E-10 8.6E-15 82.7 4.6 39 5-43 65-105 (326)
176 2yg5_A Putrescine oxidase; oxi 99.0 4.4E-10 1.5E-14 84.8 5.7 44 1-44 1-44 (453)
177 3k30_A Histamine dehydrogenase 99.0 1.3E-09 4.6E-14 86.3 8.5 39 5-43 391-429 (690)
178 4b1b_A TRXR, thioredoxin reduc 99.0 3.8E-10 1.3E-14 86.8 5.0 35 5-39 42-76 (542)
179 1ges_A Glutathione reductase; 99.0 5.7E-09 2E-13 78.8 11.3 99 6-166 168-266 (450)
180 3lxd_A FAD-dependent pyridine 99.0 1E-08 3.5E-13 76.6 12.4 109 5-174 152-262 (415)
181 2r9z_A Glutathione amide reduc 99.0 1E-08 3.6E-13 77.6 12.5 98 6-166 167-265 (463)
182 2b9w_A Putative aminooxidase; 99.0 7.6E-10 2.6E-14 82.8 6.0 43 1-43 1-45 (424)
183 4eqs_A Coenzyme A disulfide re 99.0 5.7E-09 1.9E-13 78.5 10.5 110 7-165 2-116 (437)
184 3fg2_P Putative rubredoxin red 99.0 7.6E-09 2.6E-13 77.0 10.9 108 6-174 143-252 (404)
185 2bcg_G Secretory pathway GDP d 99.0 9.3E-10 3.2E-14 83.1 6.1 42 5-46 11-52 (453)
186 3ef6_A Toluene 1,2-dioxygenase 98.9 5.3E-09 1.8E-13 78.1 9.7 107 6-174 144-252 (410)
187 1nhp_A NADH peroxidase; oxidor 98.9 8.6E-09 2.9E-13 77.7 10.6 99 5-166 149-247 (447)
188 1q1r_A Putidaredoxin reductase 98.9 1.8E-08 6.2E-13 75.6 11.3 108 6-174 150-261 (431)
189 1v0j_A UDP-galactopyranose mut 98.9 1.7E-09 6E-14 80.4 5.7 39 5-43 7-46 (399)
190 1sez_A Protoporphyrinogen oxid 98.9 3.4E-09 1.2E-13 81.0 7.4 61 5-65 13-88 (504)
191 1v59_A Dihydrolipoamide dehydr 98.9 1.2E-08 4.2E-13 77.5 10.4 100 6-166 184-288 (478)
192 1ebd_A E3BD, dihydrolipoamide 98.9 1.9E-08 6.5E-13 76.0 10.8 98 6-166 171-271 (455)
193 2hqm_A GR, grase, glutathione 98.9 4.5E-08 1.5E-12 74.5 12.7 100 6-166 186-286 (479)
194 1ojt_A Surface protein; redox- 98.9 1.6E-08 5.5E-13 77.0 10.0 98 6-166 186-287 (482)
195 3hdq_A UDP-galactopyranose mut 98.9 3E-09 1E-13 78.8 5.8 40 4-43 28-67 (397)
196 3iwa_A FAD-dependent pyridine 98.9 3.5E-08 1.2E-12 74.9 11.5 107 6-174 160-269 (472)
197 1fec_A Trypanothione reductase 98.8 3E-08 1E-12 75.7 11.0 99 6-166 188-289 (490)
198 1xdi_A RV3303C-LPDA; reductase 98.8 3.4E-08 1.2E-12 75.5 11.3 98 6-166 183-280 (499)
199 2wpf_A Trypanothione reductase 98.8 3.7E-08 1.3E-12 75.2 11.3 99 6-166 192-293 (495)
200 2e1m_A L-glutamate oxidase; L- 98.8 4.2E-09 1.4E-13 77.4 5.8 39 4-42 43-82 (376)
201 1onf_A GR, grase, glutathione 98.8 4.8E-08 1.6E-12 74.7 11.8 99 6-166 177-276 (500)
202 4g6h_A Rotenone-insensitive NA 98.8 1.5E-08 5.1E-13 77.5 9.0 35 5-39 42-76 (502)
203 4dsg_A UDP-galactopyranose mut 98.8 5.1E-09 1.7E-13 79.7 6.1 41 4-44 8-49 (484)
204 2bi7_A UDP-galactopyranose mut 98.8 4.7E-09 1.6E-13 77.7 5.8 40 4-43 2-41 (384)
205 2gqw_A Ferredoxin reductase; f 98.8 5.3E-08 1.8E-12 72.6 11.3 103 6-174 146-250 (408)
206 3ntd_A FAD-dependent pyridine 98.8 1.6E-07 5.6E-12 72.7 14.3 109 6-174 152-278 (565)
207 2qae_A Lipoamide, dihydrolipoy 98.8 6.8E-08 2.3E-12 73.3 11.2 98 6-166 175-277 (468)
208 1i8t_A UDP-galactopyranose mut 98.8 7.5E-09 2.6E-13 76.1 5.6 39 5-43 1-39 (367)
209 2a8x_A Dihydrolipoyl dehydroge 98.8 9.6E-08 3.3E-12 72.3 11.8 97 6-165 172-271 (464)
210 1mo9_A ORF3; nucleotide bindin 98.8 5E-08 1.7E-12 75.0 10.3 108 6-174 215-328 (523)
211 1zmd_A Dihydrolipoyl dehydroge 98.8 7E-08 2.4E-12 73.3 10.8 99 6-165 179-282 (474)
212 3oc4_A Oxidoreductase, pyridin 98.8 8E-08 2.7E-12 72.6 11.1 97 6-165 148-244 (452)
213 4b1b_A TRXR, thioredoxin reduc 98.8 1E-07 3.5E-12 73.4 11.6 97 6-166 224-320 (542)
214 2bc0_A NADH oxidase; flavoprot 98.8 8.2E-08 2.8E-12 73.2 10.8 97 6-165 195-291 (490)
215 1d5t_A Guanine nucleotide diss 98.8 1.3E-08 4.6E-13 76.4 6.3 43 4-46 5-47 (433)
216 1dxl_A Dihydrolipoamide dehydr 98.7 5.7E-08 1.9E-12 73.7 9.6 98 6-166 178-280 (470)
217 1lvl_A Dihydrolipoamide dehydr 98.7 4.1E-08 1.4E-12 74.3 8.7 96 6-166 172-269 (458)
218 3ic9_A Dihydrolipoamide dehydr 98.7 1.6E-07 5.4E-12 71.7 11.9 95 6-165 175-274 (492)
219 2cdu_A NADPH oxidase; flavoenz 98.7 1.2E-07 4.2E-12 71.5 11.2 98 6-166 150-248 (452)
220 1xhc_A NADH oxidase /nitrite r 98.7 8.6E-08 2.9E-12 70.5 10.0 100 6-174 144-245 (367)
221 1m6i_A Programmed cell death p 98.7 1.1E-07 3.9E-12 72.5 10.4 107 6-174 181-293 (493)
222 3ics_A Coenzyme A-disulfide re 98.7 2.9E-07 1E-11 71.7 12.7 104 6-174 188-293 (588)
223 1zk7_A HGII, reductase, mercur 98.7 1.1E-07 3.7E-12 72.1 9.8 96 6-166 177-272 (467)
224 4dna_A Probable glutathione re 98.7 1.7E-07 5.6E-12 71.1 10.6 98 6-166 171-269 (463)
225 4eqs_A Coenzyme A disulfide re 98.7 1.8E-07 6.2E-12 70.3 10.7 101 6-173 148-250 (437)
226 1trb_A Thioredoxin reductase; 98.7 2.1E-07 7.1E-12 66.9 10.6 96 6-165 146-247 (320)
227 3cgb_A Pyridine nucleotide-dis 98.7 8.1E-08 2.8E-12 73.1 8.8 97 5-165 186-282 (480)
228 3lad_A Dihydrolipoamide dehydr 98.7 3.1E-07 1.1E-11 69.7 12.0 98 6-166 181-281 (476)
229 3urh_A Dihydrolipoyl dehydroge 98.7 2E-07 6.7E-12 71.2 10.8 97 6-165 199-300 (491)
230 3itj_A Thioredoxin reductase 1 98.7 2.8E-07 9.5E-12 66.6 10.5 93 6-165 174-271 (338)
231 2iid_A L-amino-acid oxidase; f 98.6 3.1E-08 1E-12 75.6 5.4 39 5-43 33-71 (498)
232 3dgh_A TRXR-1, thioredoxin red 98.6 4.1E-07 1.4E-11 69.3 11.3 97 6-165 188-289 (483)
233 2q7v_A Thioredoxin reductase; 98.6 7.1E-07 2.4E-11 64.3 11.7 92 6-165 153-249 (325)
234 3pl8_A Pyranose 2-oxidase; sub 98.6 3.3E-08 1.1E-12 77.5 4.9 39 4-42 45-83 (623)
235 2vdc_G Glutamate synthase [NAD 98.6 3.7E-08 1.3E-12 74.4 5.1 38 5-42 122-159 (456)
236 2zbw_A Thioredoxin reductase; 98.6 3.5E-07 1.2E-11 66.1 9.9 95 6-165 153-252 (335)
237 3cty_A Thioredoxin reductase; 98.6 6.2E-07 2.1E-11 64.4 11.1 92 6-165 156-252 (319)
238 1onf_A GR, grase, glutathione 98.6 4.2E-08 1.4E-12 75.0 5.2 34 5-38 2-35 (500)
239 3s5w_A L-ornithine 5-monooxyge 98.6 5.3E-07 1.8E-11 68.2 10.9 133 5-165 227-377 (463)
240 3kd9_A Coenzyme A disulfide re 98.6 6.7E-07 2.3E-11 67.5 11.4 104 6-174 149-255 (449)
241 2q0l_A TRXR, thioredoxin reduc 98.6 7.8E-07 2.7E-11 63.6 11.2 93 6-165 144-241 (311)
242 3dgz_A Thioredoxin reductase 2 98.6 7.7E-07 2.6E-11 67.9 11.6 97 6-165 186-287 (488)
243 3f8d_A Thioredoxin reductase ( 98.6 9.8E-07 3.3E-11 63.3 11.2 101 6-174 155-262 (323)
244 1b37_A Protein (polyamine oxid 98.5 1.1E-07 3.6E-12 72.2 6.0 54 108-165 207-270 (472)
245 3g5s_A Methylenetetrahydrofola 98.5 9.7E-08 3.3E-12 70.2 5.4 34 6-39 2-35 (443)
246 3dk9_A Grase, GR, glutathione 98.5 8.9E-07 3E-11 67.3 11.0 99 6-165 188-293 (478)
247 3d1c_A Flavin-containing putat 98.5 6.5E-07 2.2E-11 65.6 9.9 104 6-165 167-272 (369)
248 1fl2_A Alkyl hydroperoxide red 98.5 1.6E-06 5.5E-11 61.9 11.5 93 6-165 145-242 (310)
249 3l8k_A Dihydrolipoyl dehydroge 98.5 1.1E-06 3.7E-11 66.7 11.0 97 6-166 173-273 (466)
250 3t37_A Probable dehydrogenase; 98.5 9E-08 3.1E-12 73.5 4.6 36 4-39 16-52 (526)
251 1lqt_A FPRA; NADP+ derivative, 98.5 9E-08 3.1E-12 72.4 4.3 39 4-42 2-47 (456)
252 1vdc_A NTR, NADPH dependent th 98.5 2.3E-06 7.7E-11 61.8 11.6 95 6-165 160-259 (333)
253 3r9u_A Thioredoxin reductase; 98.5 1.3E-06 4.6E-11 62.4 10.3 93 6-165 148-244 (315)
254 1kdg_A CDH, cellobiose dehydro 98.5 1.1E-07 3.7E-12 73.5 4.8 36 4-39 6-41 (546)
255 3ab1_A Ferredoxin--NADP reduct 98.5 3.4E-07 1.2E-11 66.9 7.2 96 6-165 164-263 (360)
256 3gwf_A Cyclohexanone monooxyge 98.5 2.4E-06 8.2E-11 65.9 11.4 34 6-39 179-212 (540)
257 3lzw_A Ferredoxin--NADP reduct 98.5 2.1E-06 7.2E-11 61.8 10.5 99 6-173 155-260 (332)
258 1o94_A Tmadh, trimethylamine d 98.4 2.2E-07 7.6E-12 74.1 5.5 39 5-43 389-427 (729)
259 1gpe_A Protein (glucose oxidas 98.4 2.6E-07 8.8E-12 72.0 5.4 39 1-39 20-59 (587)
260 1ju2_A HydroxynitrIle lyase; f 98.4 1.2E-07 4E-12 73.2 3.5 36 4-40 25-60 (536)
261 2a87_A TRXR, TR, thioredoxin r 98.4 1.7E-06 6E-11 62.6 9.4 94 6-165 156-252 (335)
262 1ps9_A 2,4-dienoyl-COA reducta 98.4 3E-07 1E-11 72.8 5.8 39 5-43 373-411 (671)
263 2x8g_A Thioredoxin glutathione 98.4 2.1E-07 7E-12 72.7 4.8 34 4-37 106-139 (598)
264 2z3y_A Lysine-specific histone 98.4 2.7E-07 9.3E-12 72.9 5.4 38 5-42 107-144 (662)
265 2xag_A Lysine-specific histone 98.4 3.7E-07 1.3E-11 73.7 5.7 38 5-42 278-315 (852)
266 3uox_A Otemo; baeyer-villiger 98.4 4.1E-06 1.4E-10 64.7 10.8 34 6-39 186-219 (545)
267 1gte_A Dihydropyrimidine dehyd 98.4 4.6E-07 1.6E-11 74.8 5.6 38 5-42 187-225 (1025)
268 3qfa_A Thioredoxin reductase 1 98.3 5.5E-06 1.9E-10 63.6 11.0 99 6-165 211-315 (519)
269 1vg0_A RAB proteins geranylger 98.3 1E-06 3.5E-11 68.9 6.9 55 5-60 8-62 (650)
270 2jbv_A Choline oxidase; alcoho 98.3 4.1E-07 1.4E-11 70.3 4.7 39 2-40 10-49 (546)
271 3q9t_A Choline dehydrogenase a 98.3 3.7E-07 1.3E-11 70.9 4.3 36 4-39 5-41 (577)
272 3qvp_A Glucose oxidase; oxidor 98.3 4.9E-07 1.7E-11 70.2 4.7 35 4-38 18-53 (583)
273 2x8g_A Thioredoxin glutathione 98.3 6.5E-06 2.2E-10 64.3 10.8 32 6-37 287-318 (598)
274 1n4w_A CHOD, cholesterol oxida 98.3 6.9E-07 2.3E-11 68.4 4.8 35 4-38 4-38 (504)
275 4g6h_A Rotenone-insensitive NA 98.3 6.5E-06 2.2E-10 63.0 9.8 50 109-164 278-331 (502)
276 1hyu_A AHPF, alkyl hydroperoxi 98.3 1E-05 3.5E-10 62.2 10.8 93 6-165 356-453 (521)
277 1cjc_A Protein (adrenodoxin re 98.3 8.1E-07 2.8E-11 67.2 4.6 38 4-41 5-44 (460)
278 3fim_B ARYL-alcohol oxidase; A 98.2 5.8E-07 2E-11 69.6 3.0 35 5-39 2-37 (566)
279 2gv8_A Monooxygenase; FMO, FAD 98.2 5.7E-06 2E-10 62.3 8.3 34 6-39 213-247 (447)
280 1coy_A Cholesterol oxidase; ox 98.2 1.2E-06 4.2E-11 67.1 4.7 35 4-38 10-44 (507)
281 3ayj_A Pro-enzyme of L-phenyla 98.2 8.8E-07 3E-11 70.0 3.4 36 5-40 56-100 (721)
282 4a5l_A Thioredoxin reductase; 98.2 2.1E-05 7.3E-10 56.2 10.3 34 6-39 153-186 (314)
283 3fbs_A Oxidoreductase; structu 98.1 1.8E-05 6.1E-10 56.0 9.5 94 6-174 142-237 (297)
284 4ap3_A Steroid monooxygenase; 98.1 1.1E-05 3.6E-10 62.5 8.1 34 6-39 192-225 (549)
285 2xve_A Flavin-containing monoo 98.1 1.8E-05 6.1E-10 60.0 9.1 34 6-39 198-231 (464)
286 1ps9_A 2,4-dienoyl-COA reducta 98.0 2.7E-05 9.3E-10 61.7 9.5 49 108-165 578-628 (671)
287 1o94_A Tmadh, trimethylamine d 98.0 1.2E-05 4.3E-10 64.2 7.4 33 6-38 529-563 (729)
288 2gag_A Heterotetrameric sarcos 98.0 3.1E-05 1.1E-09 63.7 9.9 89 6-165 285-383 (965)
289 2vdc_G Glutamate synthase [NAD 97.8 0.0001 3.5E-09 55.7 7.8 34 6-39 265-299 (456)
290 3llv_A Exopolyphosphatase-rela 97.7 4.1E-05 1.4E-09 48.3 4.7 34 5-38 6-39 (141)
291 1gte_A Dihydropyrimidine dehyd 97.7 0.0003 1E-08 58.4 10.7 32 7-38 334-366 (1025)
292 4a9w_A Monooxygenase; baeyer-v 97.7 8.8E-05 3E-09 53.7 6.8 32 6-38 164-195 (357)
293 3klj_A NAD(FAD)-dependent dehy 97.7 4.3E-05 1.5E-09 56.5 5.0 36 6-41 147-182 (385)
294 1id1_A Putative potassium chan 97.7 8.5E-05 2.9E-09 47.5 5.4 35 4-38 2-36 (153)
295 2g1u_A Hypothetical protein TM 97.6 7.4E-05 2.5E-09 47.9 4.8 35 5-39 19-53 (155)
296 1lqt_A FPRA; NADP+ derivative, 97.6 0.00026 9E-09 53.5 8.4 34 6-39 148-202 (456)
297 3sx6_A Sulfide-quinone reducta 97.6 0.00036 1.2E-08 52.4 8.8 49 107-163 212-267 (437)
298 3fwz_A Inner membrane protein 97.6 8.2E-05 2.8E-09 46.9 4.5 34 5-38 7-40 (140)
299 1cjc_A Protein (adrenodoxin re 97.6 0.00095 3.3E-08 50.5 11.1 34 6-39 146-200 (460)
300 3h8l_A NADH oxidase; membrane 97.6 0.0004 1.4E-08 51.6 8.9 47 109-165 224-270 (409)
301 4fk1_A Putative thioredoxin re 97.5 0.0013 4.6E-08 46.7 10.4 98 6-174 147-247 (304)
302 1lss_A TRK system potassium up 97.5 0.00013 4.4E-09 45.6 4.3 33 6-38 5-37 (140)
303 3ic5_A Putative saccharopine d 97.5 0.00012 4.2E-09 44.3 4.0 34 5-38 5-39 (118)
304 3h28_A Sulfide-quinone reducta 97.4 0.00043 1.5E-08 51.9 7.4 50 107-164 204-255 (430)
305 2hmt_A YUAA protein; RCK, KTN, 97.4 0.00023 7.8E-09 44.7 5.0 34 5-38 6-39 (144)
306 1f0y_A HCDH, L-3-hydroxyacyl-C 97.4 0.00017 5.7E-09 51.5 4.8 38 1-38 11-48 (302)
307 3k96_A Glycerol-3-phosphate de 97.4 0.00018 6.3E-09 52.6 4.6 38 1-38 25-62 (356)
308 4gcm_A TRXR, thioredoxin reduc 97.4 0.00018 6.1E-09 51.4 4.3 35 6-40 146-180 (312)
309 1w4x_A Phenylacetone monooxyge 97.4 0.0015 5.3E-08 50.4 9.8 34 6-39 187-220 (542)
310 3mog_A Probable 3-hydroxybutyr 97.3 0.00021 7.2E-09 54.3 4.6 38 1-38 1-38 (483)
311 3ado_A Lambda-crystallin; L-gu 97.3 0.00024 8.2E-09 51.0 4.3 38 1-38 1-39 (319)
312 3tl2_A Malate dehydrogenase; c 97.3 0.00032 1.1E-08 50.3 5.0 37 1-37 4-41 (315)
313 1y56_A Hypothetical protein PH 97.2 0.0023 7.7E-08 48.9 9.3 58 111-174 265-324 (493)
314 3c85_A Putative glutathione-re 97.2 0.0004 1.4E-08 45.7 4.6 33 6-38 40-73 (183)
315 2dpo_A L-gulonate 3-dehydrogen 97.1 0.00046 1.6E-08 49.7 4.3 35 5-39 6-40 (319)
316 4e12_A Diketoreductase; oxidor 97.1 0.00048 1.6E-08 48.7 4.3 34 5-38 4-37 (283)
317 3ghy_A Ketopantoate reductase 97.1 0.00067 2.3E-08 49.2 4.9 33 5-37 3-35 (335)
318 3l4b_C TRKA K+ channel protien 97.0 0.00054 1.8E-08 46.4 3.9 32 7-38 2-33 (218)
319 4b63_A L-ornithine N5 monooxyg 97.0 0.0051 1.7E-07 47.1 9.6 34 6-39 247-282 (501)
320 3i83_A 2-dehydropantoate 2-red 97.0 0.00072 2.5E-08 48.7 4.5 33 6-38 3-35 (320)
321 1pzg_A LDH, lactate dehydrogen 97.0 0.00081 2.8E-08 48.7 4.6 33 6-38 10-43 (331)
322 3lk7_A UDP-N-acetylmuramoylala 97.0 0.00085 2.9E-08 50.7 4.8 34 5-38 9-42 (451)
323 2ewd_A Lactate dehydrogenase,; 97.0 0.00083 2.8E-08 48.3 4.5 37 1-38 1-38 (317)
324 3gg2_A Sugar dehydrogenase, UD 97.0 0.0007 2.4E-08 51.1 4.1 32 7-38 4-35 (450)
325 2ew2_A 2-dehydropantoate 2-red 96.9 0.00074 2.5E-08 48.2 4.0 33 6-38 4-36 (316)
326 3hn2_A 2-dehydropantoate 2-red 96.9 0.0008 2.7E-08 48.2 4.1 33 6-38 3-35 (312)
327 3g17_A Similar to 2-dehydropan 96.9 0.0011 3.7E-08 47.1 4.5 33 6-38 3-35 (294)
328 3l6d_A Putative oxidoreductase 96.9 0.0012 4.2E-08 47.2 4.8 34 5-38 9-42 (306)
329 3qha_A Putative oxidoreductase 96.9 0.00099 3.4E-08 47.4 4.3 35 5-39 15-49 (296)
330 3dfz_A SIRC, precorrin-2 dehyd 96.9 0.0015 5E-08 44.5 4.7 33 5-37 31-63 (223)
331 3g0o_A 3-hydroxyisobutyrate de 96.9 0.001 3.4E-08 47.5 4.1 34 5-38 7-40 (303)
332 2qyt_A 2-dehydropantoate 2-red 96.8 0.00075 2.6E-08 48.3 3.3 36 1-36 4-45 (317)
333 1bg6_A N-(1-D-carboxylethyl)-L 96.8 0.001 3.5E-08 48.5 4.1 34 5-38 4-37 (359)
334 1y6j_A L-lactate dehydrogenase 96.8 0.0013 4.4E-08 47.3 4.5 38 1-38 1-42 (318)
335 3ggo_A Prephenate dehydrogenas 96.8 0.0015 5E-08 47.0 4.6 34 5-38 33-68 (314)
336 1kyq_A Met8P, siroheme biosynt 96.8 0.0012 4E-08 46.4 3.8 34 5-38 13-46 (274)
337 4huj_A Uncharacterized protein 96.8 0.00083 2.9E-08 45.6 3.0 36 4-39 22-58 (220)
338 2uyy_A N-PAC protein; long-cha 96.7 0.0023 7.9E-08 45.9 5.3 35 5-39 30-64 (316)
339 3pqe_A L-LDH, L-lactate dehydr 96.7 0.0016 5.5E-08 47.0 4.3 38 1-38 1-40 (326)
340 1ks9_A KPA reductase;, 2-dehyd 96.7 0.0017 5.9E-08 45.8 4.5 33 7-39 2-34 (291)
341 2raf_A Putative dinucleotide-b 96.7 0.0021 7.3E-08 43.3 4.6 34 6-39 20-53 (209)
342 3gvi_A Malate dehydrogenase; N 96.7 0.002 6.9E-08 46.4 4.7 37 3-39 5-42 (324)
343 1evy_A Glycerol-3-phosphate de 96.7 0.00092 3.1E-08 49.0 3.0 32 7-38 17-48 (366)
344 1t2d_A LDH-P, L-lactate dehydr 96.7 0.0024 8.3E-08 46.0 4.9 34 5-38 4-38 (322)
345 1jw9_B Molybdopterin biosynthe 96.6 0.0019 6.4E-08 44.8 4.0 34 5-38 31-65 (249)
346 4ezb_A Uncharacterized conserv 96.6 0.0015 5.1E-08 47.0 3.6 33 6-38 25-58 (317)
347 3k6j_A Protein F01G10.3, confi 96.6 0.0021 7.2E-08 48.5 4.4 34 6-39 55-88 (460)
348 3dtt_A NADP oxidoreductase; st 96.6 0.0024 8.1E-08 44.1 4.4 35 5-39 19-53 (245)
349 3l9w_A Glutathione-regulated p 96.6 0.0023 8E-08 47.7 4.5 34 5-38 4-37 (413)
350 1lld_A L-lactate dehydrogenase 96.6 0.0025 8.4E-08 45.8 4.5 33 6-38 8-42 (319)
351 2y0c_A BCEC, UDP-glucose dehyd 96.6 0.002 6.8E-08 49.0 4.1 33 6-38 9-41 (478)
352 1zcj_A Peroxisomal bifunctiona 96.6 0.0022 7.4E-08 48.6 4.3 33 6-38 38-70 (463)
353 3g79_A NDP-N-acetyl-D-galactos 96.6 0.0023 7.9E-08 48.6 4.4 35 5-39 18-54 (478)
354 4dio_A NAD(P) transhydrogenase 96.6 0.0024 8.2E-08 47.3 4.4 35 5-39 190-224 (405)
355 1zej_A HBD-9, 3-hydroxyacyl-CO 96.6 0.0021 7.3E-08 45.6 4.0 33 5-38 12-44 (293)
356 1b37_A Protein (polyamine oxid 96.6 0.0059 2E-07 46.2 6.7 40 4-43 3-43 (472)
357 2x5o_A UDP-N-acetylmuramoylala 96.6 0.0027 9.2E-08 47.8 4.7 36 5-40 5-40 (439)
358 2zyd_A 6-phosphogluconate dehy 96.6 0.0024 8.1E-08 48.6 4.4 35 4-38 14-48 (480)
359 4gwg_A 6-phosphogluconate dehy 96.6 0.0031 1.1E-07 48.0 5.0 35 4-38 3-37 (484)
360 3qsg_A NAD-binding phosphogluc 96.6 0.002 6.8E-08 46.2 3.8 33 5-37 24-57 (312)
361 3c24_A Putative oxidoreductase 96.6 0.0029 9.8E-08 44.7 4.6 33 6-38 12-45 (286)
362 3p7m_A Malate dehydrogenase; p 96.5 0.0034 1.2E-07 45.2 4.8 36 3-38 3-39 (321)
363 4g65_A TRK system potassium up 96.5 0.0012 4.2E-08 49.9 2.6 33 6-38 4-36 (461)
364 3gpi_A NAD-dependent epimerase 96.5 0.0044 1.5E-07 43.5 5.4 37 1-39 1-37 (286)
365 3doj_A AT3G25530, dehydrogenas 96.5 0.0034 1.2E-07 44.9 4.8 34 6-39 22-55 (310)
366 3ego_A Probable 2-dehydropanto 96.5 0.0029 1E-07 45.2 4.3 32 6-38 3-34 (307)
367 3cky_A 2-hydroxymethyl glutara 96.5 0.0022 7.5E-08 45.6 3.6 37 1-38 1-37 (301)
368 3tri_A Pyrroline-5-carboxylate 96.5 0.0041 1.4E-07 43.9 5.0 34 5-38 3-39 (280)
369 3oj0_A Glutr, glutamyl-tRNA re 96.5 0.0013 4.3E-08 41.5 2.1 33 6-38 22-54 (144)
370 1z82_A Glycerol-3-phosphate de 96.5 0.0032 1.1E-07 45.5 4.5 34 5-38 14-47 (335)
371 3h8v_A Ubiquitin-like modifier 96.5 0.0028 9.6E-08 44.9 4.0 34 5-38 36-70 (292)
372 3p2y_A Alanine dehydrogenase/p 96.4 0.0026 8.9E-08 46.7 3.8 35 5-39 184-218 (381)
373 2hjr_A Malate dehydrogenase; m 96.4 0.004 1.4E-07 45.0 4.8 33 6-38 15-48 (328)
374 4e21_A 6-phosphogluconate dehy 96.4 0.0029 1E-07 46.3 4.1 34 5-38 22-55 (358)
375 2rcy_A Pyrroline carboxylate r 96.4 0.0036 1.2E-07 43.5 4.4 36 5-40 4-43 (262)
376 4a7p_A UDP-glucose dehydrogena 96.4 0.0039 1.3E-07 47.0 4.7 34 6-39 9-42 (446)
377 4ffl_A PYLC; amino acid, biosy 96.4 0.0044 1.5E-07 45.3 4.8 34 6-39 2-35 (363)
378 2vns_A Metalloreductase steap3 96.4 0.0058 2E-07 41.3 5.0 33 6-38 29-61 (215)
379 1vpd_A Tartronate semialdehyde 96.3 0.0029 9.8E-08 44.9 3.5 33 6-38 6-38 (299)
380 3pef_A 6-phosphogluconate dehy 96.3 0.0048 1.6E-07 43.6 4.5 33 7-39 3-35 (287)
381 3pdu_A 3-hydroxyisobutyrate de 96.3 0.0036 1.2E-07 44.2 3.8 33 7-39 3-35 (287)
382 2v6b_A L-LDH, L-lactate dehydr 96.3 0.0046 1.6E-07 44.2 4.3 32 7-38 2-35 (304)
383 3rui_A Ubiquitin-like modifier 96.3 0.0046 1.6E-07 44.7 4.2 34 5-38 34-68 (340)
384 3hwr_A 2-dehydropantoate 2-red 96.2 0.0045 1.5E-07 44.5 4.1 31 6-37 20-50 (318)
385 2iz1_A 6-phosphogluconate dehy 96.2 0.0053 1.8E-07 46.7 4.6 34 5-38 5-38 (474)
386 3pid_A UDP-glucose 6-dehydroge 96.2 0.0044 1.5E-07 46.4 4.0 32 6-38 37-68 (432)
387 2q3e_A UDP-glucose 6-dehydroge 96.2 0.0033 1.1E-07 47.7 3.4 33 6-38 6-40 (467)
388 1pjc_A Protein (L-alanine dehy 96.2 0.0048 1.6E-07 45.2 4.2 33 6-38 168-200 (361)
389 1txg_A Glycerol-3-phosphate de 96.2 0.0037 1.3E-07 45.1 3.6 30 7-36 2-31 (335)
390 1zud_1 Adenylyltransferase THI 96.2 0.0041 1.4E-07 43.2 3.6 34 5-38 28-62 (251)
391 3vtf_A UDP-glucose 6-dehydroge 96.2 0.004 1.4E-07 46.8 3.8 34 5-38 21-54 (444)
392 1x0v_A GPD-C, GPDH-C, glycerol 96.2 0.0027 9.1E-08 46.3 2.8 35 5-39 8-49 (354)
393 1mv8_A GMD, GDP-mannose 6-dehy 96.2 0.0033 1.1E-07 47.2 3.4 32 7-38 2-33 (436)
394 2p4q_A 6-phosphogluconate dehy 96.2 0.0067 2.3E-07 46.4 5.0 34 5-38 10-43 (497)
395 3dhn_A NAD-dependent epimerase 96.2 0.0047 1.6E-07 41.8 3.9 38 1-39 1-39 (227)
396 1ldn_A L-lactate dehydrogenase 96.2 0.0058 2E-07 43.9 4.5 38 1-38 1-41 (316)
397 1x13_A NAD(P) transhydrogenase 96.2 0.0051 1.7E-07 45.7 4.3 34 6-39 173-206 (401)
398 2h78_A Hibadh, 3-hydroxyisobut 96.2 0.0039 1.3E-07 44.3 3.6 33 6-38 4-36 (302)
399 3d0o_A L-LDH 1, L-lactate dehy 96.2 0.0053 1.8E-07 44.1 4.2 35 3-37 4-40 (317)
400 2izz_A Pyrroline-5-carboxylate 96.2 0.006 2.1E-07 43.9 4.5 34 5-38 22-59 (322)
401 4dll_A 2-hydroxy-3-oxopropiona 96.1 0.0047 1.6E-07 44.4 3.8 33 6-38 32-64 (320)
402 3eag_A UDP-N-acetylmuramate:L- 96.1 0.0079 2.7E-07 43.4 4.9 35 5-39 4-39 (326)
403 4gbj_A 6-phosphogluconate dehy 96.1 0.0041 1.4E-07 44.3 3.4 34 6-39 6-39 (297)
404 2o3j_A UDP-glucose 6-dehydroge 96.1 0.0042 1.4E-07 47.3 3.5 33 6-38 10-44 (481)
405 1jay_A Coenzyme F420H2:NADP+ o 96.1 0.0077 2.6E-07 40.4 4.5 32 7-38 2-34 (212)
406 1l7d_A Nicotinamide nucleotide 96.1 0.0064 2.2E-07 44.9 4.4 35 5-39 172-206 (384)
407 3dfu_A Uncharacterized protein 96.1 0.0014 4.9E-08 44.8 0.9 37 1-37 2-38 (232)
408 3ktd_A Prephenate dehydrogenas 96.1 0.0074 2.5E-07 43.8 4.6 33 6-38 9-41 (341)
409 1nyt_A Shikimate 5-dehydrogena 96.1 0.009 3.1E-07 41.9 4.9 34 5-38 119-152 (271)
410 1ur5_A Malate dehydrogenase; o 96.1 0.0076 2.6E-07 43.1 4.6 33 6-38 3-36 (309)
411 2pv7_A T-protein [includes: ch 96.1 0.01 3.5E-07 42.2 5.3 33 6-38 22-55 (298)
412 1hdo_A Biliverdin IX beta redu 96.1 0.01 3.5E-07 39.3 5.0 34 6-39 4-38 (206)
413 3phh_A Shikimate dehydrogenase 96.1 0.008 2.7E-07 42.1 4.5 34 6-39 119-152 (269)
414 2aef_A Calcium-gated potassium 96.0 0.0032 1.1E-07 43.0 2.5 34 5-39 9-42 (234)
415 3h5n_A MCCB protein; ubiquitin 96.0 0.006 2E-07 44.5 4.0 34 5-38 118-152 (353)
416 2a9f_A Putative malic enzyme ( 96.0 0.0083 2.9E-07 44.2 4.6 35 4-38 187-222 (398)
417 1dlj_A UDP-glucose dehydrogena 96.0 0.005 1.7E-07 45.8 3.5 31 7-38 2-32 (402)
418 3ius_A Uncharacterized conserv 96.0 0.0089 3.1E-07 41.9 4.7 33 6-38 6-38 (286)
419 1b8p_A Protein (malate dehydro 96.0 0.0056 1.9E-07 44.3 3.7 37 1-37 1-45 (329)
420 3orq_A N5-carboxyaminoimidazol 96.0 0.011 3.8E-07 43.5 5.3 35 5-39 12-46 (377)
421 3o0h_A Glutathione reductase; 96.0 0.008 2.8E-07 45.7 4.6 35 6-40 192-226 (484)
422 2eez_A Alanine dehydrogenase; 96.0 0.0072 2.5E-07 44.4 4.2 33 6-38 167-199 (369)
423 1d5t_A Guanine nucleotide diss 96.0 0.0067 2.3E-07 45.5 4.1 56 107-166 234-291 (433)
424 3gt0_A Pyrroline-5-carboxylate 96.0 0.0087 3E-07 41.3 4.4 33 6-38 3-39 (247)
425 3e8x_A Putative NAD-dependent 96.0 0.01 3.6E-07 40.4 4.7 34 5-38 21-55 (236)
426 1guz_A Malate dehydrogenase; o 95.9 0.0085 2.9E-07 42.9 4.4 32 7-38 2-35 (310)
427 2wtb_A MFP2, fatty acid multif 95.9 0.0082 2.8E-07 48.1 4.6 33 6-38 313-345 (725)
428 3d1l_A Putative NADP oxidoredu 95.9 0.0076 2.6E-07 42.0 4.0 33 6-38 11-44 (266)
429 2f1k_A Prephenate dehydrogenas 95.9 0.0073 2.5E-07 42.4 3.9 32 7-38 2-33 (279)
430 1vl6_A Malate oxidoreductase; 95.9 0.0098 3.4E-07 43.7 4.6 34 4-37 191-225 (388)
431 1yj8_A Glycerol-3-phosphate de 95.9 0.0073 2.5E-07 44.4 4.0 34 6-39 22-62 (375)
432 1a5z_A L-lactate dehydrogenase 95.9 0.0071 2.4E-07 43.5 3.8 32 7-38 2-35 (319)
433 3q2o_A Phosphoribosylaminoimid 95.9 0.013 4.4E-07 43.3 5.3 33 6-38 15-47 (389)
434 4gx0_A TRKA domain protein; me 95.9 0.012 4E-07 45.8 5.2 35 6-40 349-383 (565)
435 4e4t_A Phosphoribosylaminoimid 95.9 0.012 4.1E-07 44.0 5.0 34 5-38 35-68 (419)
436 2vhw_A Alanine dehydrogenase; 95.8 0.0088 3E-07 44.1 4.2 34 5-38 168-201 (377)
437 3don_A Shikimate dehydrogenase 95.8 0.012 4E-07 41.5 4.7 35 5-39 117-152 (277)
438 2pgd_A 6-phosphogluconate dehy 95.8 0.012 4E-07 44.9 4.9 33 6-38 3-35 (482)
439 2gf2_A Hibadh, 3-hydroxyisobut 95.8 0.0095 3.3E-07 42.1 4.2 32 7-38 2-33 (296)
440 1tt5_B Ubiquitin-activating en 95.8 0.011 3.8E-07 44.3 4.6 34 5-38 40-74 (434)
441 1yqg_A Pyrroline-5-carboxylate 95.8 0.0074 2.5E-07 41.9 3.5 32 7-38 2-34 (263)
442 2g5c_A Prephenate dehydrogenas 95.8 0.0098 3.3E-07 41.8 4.1 32 7-38 3-36 (281)
443 2b9w_A Putative aminooxidase; 95.8 0.024 8.3E-07 42.1 6.5 54 107-166 206-259 (424)
444 2egg_A AROE, shikimate 5-dehyd 95.8 0.01 3.6E-07 42.2 4.2 34 5-38 141-175 (297)
445 3u62_A Shikimate dehydrogenase 95.8 0.015 5.2E-07 40.3 4.9 32 7-38 110-142 (253)
446 1y8q_A Ubiquitin-like 1 activa 95.8 0.0084 2.9E-07 43.6 3.7 34 5-38 36-70 (346)
447 3ruf_A WBGU; rossmann fold, UD 95.7 0.008 2.7E-07 43.5 3.6 36 4-39 24-60 (351)
448 2cvz_A Dehydrogenase, 3-hydrox 95.7 0.01 3.5E-07 41.8 4.1 31 7-38 3-33 (289)
449 3k30_A Histamine dehydrogenase 95.7 0.013 4.6E-07 46.6 5.1 35 6-40 524-560 (690)
450 3ond_A Adenosylhomocysteinase; 95.7 0.012 4.1E-07 44.6 4.6 34 5-38 265-298 (488)
451 3fi9_A Malate dehydrogenase; s 95.7 0.016 5.3E-07 42.1 5.0 33 5-37 8-43 (343)
452 1pjq_A CYSG, siroheme synthase 95.7 0.011 3.8E-07 44.7 4.4 33 5-37 12-44 (457)
453 3b1f_A Putative prephenate deh 95.7 0.0089 3E-07 42.2 3.7 34 5-38 6-41 (290)
454 3vps_A TUNA, NAD-dependent epi 95.7 0.015 5.3E-07 41.3 5.0 35 5-39 7-42 (321)
455 3vh1_A Ubiquitin-like modifier 95.7 0.01 3.5E-07 46.1 4.1 34 5-38 327-361 (598)
456 3c7a_A Octopine dehydrogenase; 95.7 0.0074 2.5E-07 44.8 3.3 29 7-35 4-33 (404)
457 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.7 0.011 3.8E-07 45.0 4.3 32 7-38 3-34 (478)
458 1hyh_A L-hicdh, L-2-hydroxyiso 95.7 0.0097 3.3E-07 42.5 3.8 32 7-38 3-36 (309)
459 4gsl_A Ubiquitin-like modifier 95.7 0.011 3.7E-07 46.0 4.2 34 5-38 326-360 (615)
460 1p77_A Shikimate 5-dehydrogena 95.7 0.01 3.6E-07 41.6 3.8 34 5-38 119-152 (272)
461 2bcg_G Secretory pathway GDP d 95.6 0.009 3.1E-07 45.1 3.7 55 108-166 243-301 (453)
462 2pd4_A Enoyl-[acyl-carrier-pro 95.6 0.017 5.6E-07 40.5 4.8 38 1-38 1-42 (275)
463 1xgk_A Nitrogen metabolite rep 95.6 0.023 7.8E-07 41.4 5.6 39 1-39 1-40 (352)
464 3ew7_A LMO0794 protein; Q8Y8U8 95.6 0.017 5.9E-07 38.6 4.7 32 7-38 2-34 (221)
465 3qvo_A NMRA family protein; st 95.6 0.012 4.2E-07 40.1 3.9 36 4-39 22-59 (236)
466 1wdk_A Fatty oxidation complex 95.6 0.01 3.6E-07 47.4 4.0 33 6-38 315-347 (715)
467 3r6d_A NAD-dependent epimerase 95.6 0.024 8.1E-07 38.2 5.3 34 6-39 6-41 (221)
468 3d3w_A L-xylulose reductase; u 95.6 0.022 7.7E-07 38.9 5.2 34 5-38 7-41 (244)
469 1kjq_A GART 2, phosphoribosylg 95.6 0.02 7E-07 42.1 5.3 38 1-38 7-44 (391)
470 1oju_A MDH, malate dehydrogena 95.6 0.01 3.5E-07 42.2 3.4 32 7-38 2-35 (294)
471 3ojo_A CAP5O; rossmann fold, c 95.5 0.0095 3.2E-07 44.7 3.4 34 6-39 12-45 (431)
472 2i6t_A Ubiquitin-conjugating e 95.5 0.013 4.6E-07 41.8 4.0 33 6-38 15-49 (303)
473 1np3_A Ketol-acid reductoisome 95.5 0.019 6.5E-07 41.6 4.9 33 6-38 17-49 (338)
474 1ez4_A Lactate dehydrogenase; 95.5 0.014 4.8E-07 42.0 4.1 33 5-37 5-39 (318)
475 1sby_A Alcohol dehydrogenase; 95.5 0.029 1E-06 38.6 5.7 38 1-38 1-40 (254)
476 3tnl_A Shikimate dehydrogenase 95.5 0.02 6.8E-07 41.1 4.8 33 5-37 154-187 (315)
477 3sxp_A ADP-L-glycero-D-mannohe 95.5 0.024 8.4E-07 41.2 5.4 36 4-39 9-47 (362)
478 1lu9_A Methylene tetrahydromet 95.5 0.024 8.3E-07 40.0 5.2 34 5-38 119-153 (287)
479 1nvt_A Shikimate 5'-dehydrogen 95.5 0.018 6.1E-07 40.7 4.5 33 5-38 128-160 (287)
480 2fwm_X 2,3-dihydro-2,3-dihydro 95.5 0.029 1E-06 38.6 5.5 39 1-39 3-42 (250)
481 2hk9_A Shikimate dehydrogenase 95.5 0.014 4.7E-07 41.1 3.8 33 6-38 130-162 (275)
482 2rir_A Dipicolinate synthase, 95.4 0.019 6.6E-07 40.8 4.6 34 5-38 157-190 (300)
483 3d4o_A Dipicolinate synthase s 95.4 0.02 6.7E-07 40.6 4.6 34 5-38 155-188 (293)
484 3jyo_A Quinate/shikimate dehyd 95.4 0.021 7.1E-07 40.4 4.6 34 5-38 127-161 (283)
485 2pbz_A Hypothetical protein; N 95.4 0.021 7.2E-07 41.1 4.7 31 7-38 4-34 (320)
486 2c5a_A GDP-mannose-3', 5'-epim 95.4 0.028 9.7E-07 41.2 5.5 35 5-39 29-64 (379)
487 3h2s_A Putative NADH-flavin re 95.4 0.022 7.4E-07 38.3 4.6 32 7-38 2-34 (224)
488 2r6j_A Eugenol synthase 1; phe 95.4 0.021 7.1E-07 40.7 4.7 34 6-39 12-46 (318)
489 1y7t_A Malate dehydrogenase; N 95.4 0.014 4.9E-07 42.0 3.8 36 1-37 1-44 (327)
490 3gem_A Short chain dehydrogena 95.4 0.021 7.3E-07 39.6 4.6 38 2-39 24-62 (260)
491 1cyd_A Carbonyl reductase; sho 95.4 0.029 1E-06 38.3 5.2 35 4-38 6-41 (244)
492 1ff9_A Saccharopine reductase; 95.3 0.017 6E-07 43.5 4.3 34 5-38 3-36 (450)
493 2ahr_A Putative pyrroline carb 95.3 0.016 5.5E-07 40.2 3.9 33 6-38 4-36 (259)
494 3m1a_A Putative dehydrogenase; 95.3 0.016 5.5E-07 40.6 3.9 38 1-38 1-39 (281)
495 3k5i_A Phosphoribosyl-aminoimi 95.3 0.02 7E-07 42.5 4.6 31 5-35 24-54 (403)
496 4aj2_A L-lactate dehydrogenase 95.3 0.023 7.9E-07 41.0 4.7 34 5-38 19-54 (331)
497 2d5c_A AROE, shikimate 5-dehyd 95.3 0.024 8.2E-07 39.5 4.6 32 7-38 118-149 (263)
498 3fbt_A Chorismate mutase and s 95.3 0.021 7.3E-07 40.3 4.3 34 5-38 122-156 (282)
499 3o8q_A Shikimate 5-dehydrogena 95.3 0.027 9.2E-07 39.7 4.8 34 5-38 126-160 (281)
500 3nep_X Malate dehydrogenase; h 95.3 0.018 6E-07 41.4 3.9 32 7-38 2-35 (314)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.95 E-value=8.7e-28 Score=179.29 Aligned_cols=175 Identities=26% Similarity=0.458 Sum_probs=141.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+.+||+|||||++|+++|+.|+++|++|+|+|+.+.+...+++..+.+.+.+.++.+|+++.+.....+...+.++....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 46899999999999999999999999999999998888888999999999999999999999998888888888877653
Q ss_pred Cce-eeeecCCCC-CCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 84 GAT-QETSLTGKF-GDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 84 ~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
+.. ..+.+.... ..+.....+++..+.+.|.+.+..++++++++|++++..+ +. +.|.+.+|+++.||+||+|+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~~-v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDA---DG-VTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEET---TE-EEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecC---Cc-EEEEEcCCCEEeeCEEEECC
Confidence 332 333322100 1123456889999999999998668899999999999876 45 88999999999999999999
Q ss_pred CcchHHHhhh-CCC-CCccccee
Q 030042 162 GIHSTVAWWL-GLS-EPLNVNIG 182 (184)
Q Consensus 162 G~~s~~~~~~-~~~-~~~~~~~~ 182 (184)
|.+|.+|+.+ +.. .+.+.++.
T Consensus 178 G~~S~vr~~l~~~~~~~~~~~~~ 200 (407)
T 3rp8_A 178 GSHSALRPWVLGFTPQRRYAGYV 200 (407)
T ss_dssp CTTCSSHHHHHSSCCCCEEEEEE
T ss_pred CcChHHHHHhcCCCCCCcccCcE
Confidence 9999999988 765 45565544
No 2
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=6.8e-26 Score=168.58 Aligned_cols=166 Identities=26% Similarity=0.341 Sum_probs=130.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC-CCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEE
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL-RGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVT 79 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
|+|..+||+|||||++|+++|+.|++.|++|+|+|+.+.+ ...+.+..+.+.+.+.++.+|+++ .....+...+.+.
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~ 78 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYV 78 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEE
Confidence 7777899999999999999999999999999999998764 445788889999999999999987 3444455555555
Q ss_pred ecCCCce-eeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEE
Q 030042 80 NLGTGAT-QETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLI 158 (184)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI 158 (184)
....+.. ...... .....+..+.+.|.+.+++++++++++|++++..+ +. +.|.+.+|+++.||+||
T Consensus 79 ~~~~g~~~~~~~~~--------~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~~-v~v~~~~g~~~~ad~vV 146 (397)
T 2vou_A 79 DALTGERVGSVPAD--------WRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDS---ET-VQMRFSDGTKAEANWVI 146 (397)
T ss_dssp ETTTCCEEEEEECC--------CCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECS---SC-EEEEETTSCEEEESEEE
T ss_pred ecCCCCccccccCc--------ccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecC---CE-EEEEECCCCEEECCEEE
Confidence 5412222 222211 12467788999998887789999999999998875 44 88999999899999999
Q ss_pred ecCCcchHHHhhhCCC-CCcccce
Q 030042 159 GCDGIHSTVAWWLGLS-EPLNVNI 181 (184)
Q Consensus 159 ~a~G~~s~~~~~~~~~-~~~~~~~ 181 (184)
+|+|.+|.+|+.++ + .|.|.++
T Consensus 147 ~AdG~~S~vr~~~~-~~~~~~~~~ 169 (397)
T 2vou_A 147 GADGGASVVRKRLL-GIEPTYAGY 169 (397)
T ss_dssp ECCCTTCHHHHHHH-CCCCEEEEE
T ss_pred ECCCcchhHHHHhc-cCCCCccce
Confidence 99999999999887 4 3555554
No 3
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.94 E-value=7.4e-26 Score=168.45 Aligned_cols=170 Identities=20% Similarity=0.225 Sum_probs=131.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEe
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTN 80 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
|++.++||+|||||++|+++|+.|+++|++|+|+|+.+.+...+++..+.+.+.+.++.+++++.+.....+...+.++.
T Consensus 2 M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 81 (399)
T 2x3n_A 2 MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVY 81 (399)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEe
Confidence 55557899999999999999999999999999999988776678889999999999999999999887666666666655
Q ss_pred cCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC---CCeeeeCceEEEEeccCCCCCcce--EEEEecCcEEEee
Q 030042 81 LGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP---NGTIHFSSKIAAIDSQTHDGSSPV--FIHLVDGTIVKTK 155 (184)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~i~~~~~v~~~~~~~~~~~~~~--~v~~~~g~~~~a~ 155 (184)
........+...... .......+++..+.+.|.+.+. +++++++++|++++..+ +. + .|.+.+|+++.||
T Consensus 82 ~~g~~~~~~~~~~~~-~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~---~~-v~g~v~~~~g~~~~ad 156 (399)
T 2x3n_A 82 HDGELLRYFNYSSVD-ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE---RH-AIDQVRLNDGRVLRPR 156 (399)
T ss_dssp ETTEEEEEEETTSSC-GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT---TS-CEEEEEETTSCEEEEE
T ss_pred CCCCEEEecchHHhc-ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC---Cc-eEEEEEECCCCEEECC
Confidence 432222333332111 0112357889999999998875 57999999999998875 44 6 8888888899999
Q ss_pred EEEecCCcchHHHhhhCCCC
Q 030042 156 FLIGCDGIHSTVAWWLGLSE 175 (184)
Q Consensus 156 ~vI~a~G~~s~~~~~~~~~~ 175 (184)
+||+|+|.+|.+++.++.+.
T Consensus 157 ~vV~AdG~~s~vr~~lg~~~ 176 (399)
T 2x3n_A 157 VVVGADGIASYVRRRLLDID 176 (399)
T ss_dssp EEEECCCTTCHHHHHTSCCC
T ss_pred EEEECCCCChHHHHHhCCCc
Confidence 99999999999999998764
No 4
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.94 E-value=2.1e-25 Score=170.14 Aligned_cols=164 Identities=21% Similarity=0.304 Sum_probs=128.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+++||+||||||+|+++|+.|+++|++|+|||+.+.+...+++..+.+.+.+.++.+|+++.+... .+..... . ..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~--~-~~ 86 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGH--F-GG 86 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEE--E-TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-cccccce--e-cc
Confidence 568999999999999999999999999999999988877889999999999999999999887654 2211111 1 11
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCc---EEEeeEEE
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGT---IVKTKFLI 158 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~---~~~a~~vI 158 (184)
..+.+.......+....+++..+.+.|.+.+. +++++++++|++++.++ +. ++|.+.++. +++||+||
T Consensus 87 ---~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~~-v~v~~~~~~g~~~~~a~~vV 159 (499)
T 2qa2_A 87 ---RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG---DH-VVVEVEGPDGPRSLTTRYVV 159 (499)
T ss_dssp ---EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS---SC-EEEEEECSSCEEEEEEEEEE
T ss_pred ---eecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---CE-EEEEEEcCCCcEEEEeCEEE
Confidence 12222211111223467889999999888774 79999999999999875 44 778877764 79999999
Q ss_pred ecCCcchHHHhhhCCCCCcc
Q 030042 159 GCDGIHSTVAWWLGLSEPLN 178 (184)
Q Consensus 159 ~a~G~~s~~~~~~~~~~~~~ 178 (184)
+|+|.+|.+|+.++++.+..
T Consensus 160 gADG~~S~VR~~lg~~~~~~ 179 (499)
T 2qa2_A 160 GCDGGRSTVRKAAGFDFPGT 179 (499)
T ss_dssp ECCCTTCHHHHHTTCCCCEE
T ss_pred EccCcccHHHHHcCCCCCCC
Confidence 99999999999999876543
No 5
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.94 E-value=6.5e-26 Score=174.50 Aligned_cols=177 Identities=26% Similarity=0.342 Sum_probs=134.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccce---E
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRI---S 77 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 77 (184)
|++.++||+|||||++|+++|+.|+++|++|+||||.+.....+++..+.+.+.+.++.+|+++.+.....+.... .
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 7767899999999999999999999999999999999888888899999999999999999999998876654433 1
Q ss_pred --EEecCCCce-eee--ecCC----CCCCCC-CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCC-CCcceEE
Q 030042 78 --VTNLGTGAT-QET--SLTG----KFGDGS-GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHD-GSSPVFI 144 (184)
Q Consensus 78 --~~~~~~~~~-~~~--~~~~----~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~-~~~~~~v 144 (184)
......+.. ... .+.. .....+ ....+++..+...|.+.+. +++++++++|++++.+++. ..+ +.+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~-v~v 159 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG-VTA 159 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE-EEE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc-EEE
Confidence 111112211 111 1110 001112 3557788899888888774 7999999999999987610 015 777
Q ss_pred EEecC---cEEEeeEEEecCCcchHHHhhhCCCCCcc
Q 030042 145 HLVDG---TIVKTKFLIGCDGIHSTVAWWLGLSEPLN 178 (184)
Q Consensus 145 ~~~~g---~~~~a~~vI~a~G~~s~~~~~~~~~~~~~ 178 (184)
.+.++ .+++||+||+|+|.+|.+|+.+|++.+..
T Consensus 160 ~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~ 196 (535)
T 3ihg_A 160 RLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGH 196 (535)
T ss_dssp EEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEE
T ss_pred EEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCC
Confidence 77776 68999999999999999999998876443
No 6
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.94 E-value=2.5e-25 Score=166.22 Aligned_cols=166 Identities=27% Similarity=0.365 Sum_probs=128.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCC-eEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVE-PLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~-v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
..+||+|||||++|+++|+.|++.|++ |+|+|+.+.+...+++..+.+.+.+.++.+|+++.+.....+...+.+....
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~ 82 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQS 82 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCC
Confidence 468999999999999999999999999 9999999887778899999999999999999999988776666655555433
Q ss_pred CCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC---C-CeeeeCceEEEEeccCCCCCcceEEEEec---C--cEEE
Q 030042 83 TGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP---N-GTIHFSSKIAAIDSQTHDGSSPVFIHLVD---G--TIVK 153 (184)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~-~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g--~~~~ 153 (184)
.....................+++..+.+.|.+.+. + ++++++++|+++.. + ++ +.+.+.+ | .++.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~---~~-v~v~~~~~~~g~~~~~~ 157 (410)
T 3c96_A 83 GATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R---DG-RVLIGARDGHGKPQALG 157 (410)
T ss_dssp SCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E---TT-EEEEEEEETTSCEEEEE
T ss_pred CCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C---Cc-cEEEEecCCCCCceEEe
Confidence 222122111111111223467889999988888763 3 58999999999988 4 33 6677655 7 5799
Q ss_pred eeEEEecCCcchHHHhhhCCC
Q 030042 154 TKFLIGCDGIHSTVAWWLGLS 174 (184)
Q Consensus 154 a~~vI~a~G~~s~~~~~~~~~ 174 (184)
||+||+|+|.+|.+|+.++..
T Consensus 158 ad~vV~AdG~~S~vR~~l~~~ 178 (410)
T 3c96_A 158 ADVLVGADGIHSAVRAHLHPD 178 (410)
T ss_dssp ESEEEECCCTTCHHHHHHCTT
T ss_pred cCEEEECCCccchhHHHhcCC
Confidence 999999999999999988643
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.94 E-value=1.8e-25 Score=170.52 Aligned_cols=164 Identities=20% Similarity=0.299 Sum_probs=127.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+++||+||||||+|+++|+.|+++|++|+|+||.+.+...+++..+.+.+.+.++.+|+++.+... .......+ ..
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~---~~ 85 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF---GG 85 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE---TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc---cc
Confidence 578999999999999999999999999999999988877889999999999999999999888654 22211111 11
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCc---EEEeeEEE
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGT---IVKTKFLI 158 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~---~~~a~~vI 158 (184)
..+.+.......+....+++..+.+.|.+.+. +++++++++|++++.++ +. +++.+.++. +++||+||
T Consensus 86 ---~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~~-v~v~~~~~~g~~~~~a~~vV 158 (500)
T 2qa1_A 86 ---LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG---AG-VTVEVRGPEGKHTLRAAYLV 158 (500)
T ss_dssp ---EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET---TE-EEEEEEETTEEEEEEESEEE
T ss_pred ---eecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC---Ce-EEEEEEcCCCCEEEEeCEEE
Confidence 12222211111123467888899988888774 79999999999999876 44 777777764 79999999
Q ss_pred ecCCcchHHHhhhCCCCCcc
Q 030042 159 GCDGIHSTVAWWLGLSEPLN 178 (184)
Q Consensus 159 ~a~G~~s~~~~~~~~~~~~~ 178 (184)
+|+|.+|.+|+.++++.+..
T Consensus 159 gADG~~S~VR~~lg~~~~~~ 178 (500)
T 2qa1_A 159 GCDGGRSSVRKAAGFDFPGT 178 (500)
T ss_dssp ECCCTTCHHHHHTTCCCCEE
T ss_pred ECCCcchHHHHHcCCCcCCC
Confidence 99999999999999876543
No 8
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.93 E-value=6.1e-25 Score=163.51 Aligned_cols=170 Identities=18% Similarity=0.254 Sum_probs=128.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC--ccceeeecc-cHHHHHHHcCChHHHHhcCCCccceEEEe
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG--TGAAISFAP-NAWLALDALGVSHKLASIYPPVNRISVTN 80 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
+.+||+|||||++|+++|+.|++.|++|+|+|+.+.+.. .+.+..+.+ ...+.++.+|+++.+.....+... .++.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 468999999999999999999999999999999876543 344555554 468899999999998776555444 3333
Q ss_pred cCCCceeeeec--CCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEE
Q 030042 81 LGTGATQETSL--TGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLI 158 (184)
Q Consensus 81 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI 158 (184)
. .+.. ...+ ... .......+++..+.+.|.+.+++++++++++|++++..+ +. +.|.+.+|+++.||+||
T Consensus 104 ~-~g~~-~~~~~~~~~--~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~---~~-v~v~~~~g~~~~ad~vV 175 (398)
T 2xdo_A 104 E-KGNI-LSTKNVKPE--NRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGK---KK-WTLTFENKPSETADLVI 175 (398)
T ss_dssp S-SSEE-EEECCCGGG--TTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECS---SS-EEEEETTSCCEEESEEE
T ss_pred C-CCCc-hhhcccccc--CCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECC---CE-EEEEECCCcEEecCEEE
Confidence 2 2221 1111 110 111233688999999999998778899999999998875 44 88999999889999999
Q ss_pred ecCCcchHHHhhhCCCCCccccee
Q 030042 159 GCDGIHSTVAWWLGLSEPLNVNIG 182 (184)
Q Consensus 159 ~a~G~~s~~~~~~~~~~~~~~~~~ 182 (184)
+|+|.+|.+|+.++...|.|.+..
T Consensus 176 ~AdG~~S~vR~~l~~~~~~~~g~~ 199 (398)
T 2xdo_A 176 LANGGMSKVRKFVTDTEVEETGTF 199 (398)
T ss_dssp ECSCTTCSCCTTTCCCCCEEEEEE
T ss_pred ECCCcchhHHhhccCCCceEcceE
Confidence 999999999998876667776544
No 9
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.93 E-value=2.2e-25 Score=172.19 Aligned_cols=169 Identities=22% Similarity=0.209 Sum_probs=128.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+++||+|||||++|+++|+.|+++|++|+|||+.+.+...+++..+.+.+.+.++.+|+++.+........... . ..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~--~-~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLP--F-AG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCC--B-TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCce--e-CC
Confidence 35899999999999999999999999999999998888888999999999999999999999877654433110 0 11
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEE--ecC-cEEEeeEEE
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHL--VDG-TIVKTKFLI 158 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~--~~g-~~~~a~~vI 158 (184)
.....+.+.......+....+++..+.+.|.+.+. +++++++++|++++.++ ++ +.|.+ .+| ++++||+||
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~---~~-v~v~~~~~~G~~~~~a~~vV 200 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA---EA-VEVTVAGPSGPYPVRARYGV 200 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS---SC-EEEEEEETTEEEEEEESEEE
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC---Ce-EEEEEEeCCCcEEEEeCEEE
Confidence 00012222222112224456888899988888775 89999999999999876 44 66666 677 689999999
Q ss_pred ecCCcchHHHhhhCCCCCccc
Q 030042 159 GCDGIHSTVAWWLGLSEPLNV 179 (184)
Q Consensus 159 ~a~G~~s~~~~~~~~~~~~~~ 179 (184)
+|+|.+|.+|+.++++.+..+
T Consensus 201 ~ADG~~S~vR~~lGi~~~~~~ 221 (570)
T 3fmw_A 201 GCDGGRSTVRRLAADRFPGTE 221 (570)
T ss_dssp ECSCSSCHHHHHTTCCCCCCC
T ss_pred EcCCCCchHHHHcCCCCccce
Confidence 999999999999998766443
No 10
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.93 E-value=7e-25 Score=164.16 Aligned_cols=172 Identities=22% Similarity=0.286 Sum_probs=129.2
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCcc-ceEEE
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVN-RISVT 79 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (184)
|+++++||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+.+...++.+++++.+........ ...+.
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 79 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFV 79 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEE
Confidence 66667999999999999999999999999999999986543 35677788999999999999988877654333 23332
Q ss_pred ecCCCceeeeecCCCCCCCC-CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCc--EEEe
Q 030042 80 NLGTGATQETSLTGKFGDGS-GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGT--IVKT 154 (184)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~--~~~a 154 (184)
+ ......+.+........ ..+.+++..+.+.|.+.+. |++++++++|+++...++ ...+.+.+.+|+ ++.|
T Consensus 80 ~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~~~v~v~~~~g~~~~~~a 155 (421)
T 3nix_A 80 R--GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGT--DSVTTIEDINGNKREIEA 155 (421)
T ss_dssp E--TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT--EEEEEEEETTSCEEEEEE
T ss_pred e--CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EEEEEEEcCCCCEEEEEc
Confidence 2 12223444443322222 4568899999999988774 899999999999988752 222566777887 7999
Q ss_pred eEEEecCCcchHHHhhhCCCCCc
Q 030042 155 KFLIGCDGIHSTVAWWLGLSEPL 177 (184)
Q Consensus 155 ~~vI~a~G~~s~~~~~~~~~~~~ 177 (184)
|+||+|+|.+|.+++.++.+.|.
T Consensus 156 ~~vV~A~G~~s~l~~~~g~~~~~ 178 (421)
T 3nix_A 156 RFIIDASGYGRVIPRMFGLDKPS 178 (421)
T ss_dssp EEEEECCGGGCHHHHHTTCEECC
T ss_pred CEEEECCCCchhhHHhcCCCCCC
Confidence 99999999999999998876543
No 11
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.93 E-value=1.5e-24 Score=167.26 Aligned_cols=169 Identities=23% Similarity=0.338 Sum_probs=129.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccc---eEEEe
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNR---ISVTN 80 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 80 (184)
.++||+||||||+|+++|+.|+++|++|+|+||.+.+...+++..+.+.+.+.++.+|+++.+.....+... ..+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 458999999999999999999999999999999988888888999999999999999999999877665532 12221
Q ss_pred cCCCce-eeeecCCCC-----CCCC-CCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec---C-
Q 030042 81 LGTGAT-QETSLTGKF-----GDGS-GPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---G- 149 (184)
Q Consensus 81 ~~~~~~-~~~~~~~~~-----~~~~-~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g- 149 (184)
...+.. ..+.+.... ...+ ....+++..+.+.|.+.+... ++++++|++++.++ +. +++.+.+ |
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~---~~-v~v~~~~~~~G~ 179 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRD---DH-VRATITDLRTGA 179 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECS---SC-EEEEEEETTTCC
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeC---CE-EEEEEEECCCCC
Confidence 112221 223222110 0111 346788889999998887644 99999999998875 44 6666655 6
Q ss_pred -cEEEeeEEEecCCcchHHHhhhCCCCCc
Q 030042 150 -TIVKTKFLIGCDGIHSTVAWWLGLSEPL 177 (184)
Q Consensus 150 -~~~~a~~vI~a~G~~s~~~~~~~~~~~~ 177 (184)
.++.||+||+|+|.+|.+|+.++++.+.
T Consensus 180 ~~~i~a~~vVgADG~~S~vR~~lg~~~~g 208 (549)
T 2r0c_A 180 TRAVHARYLVACDGASSPTRKALGIDAPP 208 (549)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCCCCB
T ss_pred EEEEEeCEEEECCCCCcHHHHHcCCCCCC
Confidence 4799999999999999999999887654
No 12
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.93 E-value=8.9e-25 Score=161.65 Aligned_cols=165 Identities=24% Similarity=0.319 Sum_probs=132.7
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
|..+||+|||||++|+++|+.|++.|++|+|+|+.+.+...+++..+.+.+.+.++.+|+++.+.....+...+.+...
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~- 87 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH- 87 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET-
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC-
Confidence 3468999999999999999999999999999999988877789999999999999999999999887777777776664
Q ss_pred CCce-eeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEe
Q 030042 83 TGAT-QETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIG 159 (184)
Q Consensus 83 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~ 159 (184)
+.. ....+. +.....+++..+.+.|.+.+. +++++++++|++++. + + .|.+.+|+++.||+||+
T Consensus 88 -g~~~~~~~~~-----~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~----~v~~~~g~~~~ad~vV~ 154 (379)
T 3alj_A 88 -NKSVSKETFN-----GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V--G----RLTLQTGEVLEADLIVG 154 (379)
T ss_dssp -TEEEEEECGG-----GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--T----EEEETTSCEEECSEEEE
T ss_pred -CceeeeccCC-----CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C----EEEECCCCEEEcCEEEE
Confidence 322 222221 223568899999998888774 789999999999987 3 3 46677888899999999
Q ss_pred cCCcchHHHhhhCCCC-Ccccce
Q 030042 160 CDGIHSTVAWWLGLSE-PLNVNI 181 (184)
Q Consensus 160 a~G~~s~~~~~~~~~~-~~~~~~ 181 (184)
|+|.+|.+++.++... +.+.++
T Consensus 155 AdG~~s~vr~~l~~~~~~~~~~~ 177 (379)
T 3alj_A 155 ADGVGSKVRDSIGFKQDRWVSKD 177 (379)
T ss_dssp CCCTTCHHHHHHCCCEEEEEEEE
T ss_pred CCCccHHHHHHhcCCCCcCcCCc
Confidence 9999999999887632 344443
No 13
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.92 E-value=6.3e-24 Score=166.28 Aligned_cols=172 Identities=18% Similarity=0.264 Sum_probs=131.5
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC-
Q 030042 5 EKDVVIIGAGIAGLATALALKR-LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG- 82 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (184)
++||+||||||+|+++|+.|++ .|++|+||||.+.+...+++..+.+.+++.++.+|+++.+.....+...+.++...
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 5899999999999999999999 99999999999888888899999999999999999999988776666666665532
Q ss_pred --CCcee---eeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CC--eeeeCceEEEEeccCC-CCCcceEEEEe-----
Q 030042 83 --TGATQ---ETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NG--TIHFSSKIAAIDSQTH-DGSSPVFIHLV----- 147 (184)
Q Consensus 83 --~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~~~~~~~-~~~~~~~v~~~----- 147 (184)
.+... .+.........+....+++..+.+.|.+.+. ++ +++++++|++++.+++ ++.. +.|.+.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~-v~v~~~~~~~~ 190 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYP-VTVTLERCDAA 190 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCC-EEEEEEECSGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCC-EEEEEEecccc
Confidence 12221 1221111111224457788888888888774 54 8999999999987652 1123 666654
Q ss_pred -cC--cEEEeeEEEecCCcchHHHhhhCCCCCc
Q 030042 148 -DG--TIVKTKFLIGCDGIHSTVAWWLGLSEPL 177 (184)
Q Consensus 148 -~g--~~~~a~~vI~a~G~~s~~~~~~~~~~~~ 177 (184)
+| ++++||+||+|+|.+|.+|+.++++.+.
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g 223 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVG 223 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCC
Confidence 45 5799999999999999999999887643
No 14
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.92 E-value=2.1e-24 Score=159.98 Aligned_cols=166 Identities=17% Similarity=0.244 Sum_probs=114.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc-cceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT-GAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
|++|||+||||||+|+++|+.|+++|++|+|+||.+.++.. .++..+++. .++.+++.........+.....+..+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~---~l~~l~~~~~~~~~~~~~~~~~~~~~ 78 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKG---ILNEADIKADRSFIANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETH---HHHHTTCCCCTTTEEEEESEEEEECT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHH---HHHHcCCCchhhhhhcccceEEEEeC
Confidence 57899999999999999999999999999999998776543 234455543 45566554332222223344455444
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEE-ecC--cEEEeeE
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDG--TIVKTKF 156 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g--~~~~a~~ 156 (184)
............ ......+.++|..+.+.|.+.+. |++++++++|+++...+ +.. ..+.. .++ .+++||+
T Consensus 79 ~~~~~~~~~~~~--~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~-~~v~~~~~~~~~~~~a~~ 153 (397)
T 3oz2_A 79 SEKRPIILQSEK--AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKV-AGAKIRHNNEIVDVRAKM 153 (397)
T ss_dssp TCSSCEEEECSS--SSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEE-EEEEEEETTEEEEEEEEE
T ss_pred CCceEeeccccc--cCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--cee-eeeeecccccceEEEEeE
Confidence 333222222211 11224467899999999988875 89999999999988776 232 33332 333 3689999
Q ss_pred EEecCCcchHHHhhhCCCCC
Q 030042 157 LIGCDGIHSTVAWWLGLSEP 176 (184)
Q Consensus 157 vI~a~G~~s~~~~~~~~~~~ 176 (184)
||+|+|.+|.+++.+++..+
T Consensus 154 vIgAdG~~S~vr~~~g~~~~ 173 (397)
T 3oz2_A 154 VIAADGFESEFGRWAGLKSV 173 (397)
T ss_dssp EEECCCTTCHHHHHHTCGGG
T ss_pred EEeCCccccHHHHHcCCCcc
Confidence 99999999999999987644
No 15
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.92 E-value=7.3e-24 Score=157.91 Aligned_cols=165 Identities=20% Similarity=0.188 Sum_probs=119.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC--ccceeeecccHHHHHHHcCChHHHHhc---CCCcc-ceEEE
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG--TGAAISFAPNAWLALDALGVSHKLASI---YPPVN-RISVT 79 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~ 79 (184)
.+|+||||||+||++|+.|+++|++|+|+||.+.+.. .|.++.+.+.+.+.|+++++.+.+... ..... ...+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 3799999999999999999999999999999877654 366788899999999999988765432 11111 11111
Q ss_pred ecCCCceeeeecC----CCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEee
Q 030042 80 NLGTGATQETSLT----GKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTK 155 (184)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~ 155 (184)
. ........... .....+.....+++..|.+.|.+.+ +..|++++++++++..++ .. ++|.+.||++++||
T Consensus 82 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~-~~~v~~~~~v~~~~~~~~--~~-v~v~~~dG~~~~ad 156 (412)
T 4hb9_A 82 N-ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL-ANTIQWNKTFVRYEHIEN--GG-IKIFFADGSHENVD 156 (412)
T ss_dssp C-TTSCEEEC--------------CEEEEEHHHHHHHHHTTC-TTTEECSCCEEEEEECTT--SC-EEEEETTSCEEEES
T ss_pred c-CCcceecccCCccccccccccccceEeeHHHHHHHHHhhc-cceEEEEEEEEeeeEcCC--Ce-EEEEECCCCEEEee
Confidence 1 11111111000 0011122445788999999999887 456899999999987662 34 88999999999999
Q ss_pred EEEecCCcchHHHhhhCCCC
Q 030042 156 FLIGCDGIHSTVAWWLGLSE 175 (184)
Q Consensus 156 ~vI~a~G~~s~~~~~~~~~~ 175 (184)
+||+|||.+|.+|+.++...
T Consensus 157 lvVgADG~~S~vR~~l~~~~ 176 (412)
T 4hb9_A 157 VLVGADGSNSKVRKQYLPFI 176 (412)
T ss_dssp EEEECCCTTCHHHHHHSTTC
T ss_pred EEEECCCCCcchHHHhCCCc
Confidence 99999999999999886554
No 16
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.92 E-value=5.5e-24 Score=167.03 Aligned_cols=173 Identities=23% Similarity=0.252 Sum_probs=133.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-----CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEE
Q 030042 4 VEKDVVIIGAGIAGLATALALKR-----LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISV 78 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~-----~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
.++||+||||||+||++|+.|++ .|++|+|||+.+.+...+++..+.+.+++.++.+|+++.+.....+...+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 36899999999999999999999 9999999999988777889999999999999999999999887777777777
Q ss_pred EecCCC-ce-e--eeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--C---CeeeeCceEEEEeccCC-----CCCcceEE
Q 030042 79 TNLGTG-AT-Q--ETSLTGKFGDGSGPRFIHRKKLLQTLADELP--N---GTIHFSSKIAAIDSQTH-----DGSSPVFI 144 (184)
Q Consensus 79 ~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~---~~i~~~~~v~~~~~~~~-----~~~~~~~v 144 (184)
+..... .. . .+.........+....+++..+.+.|.+.+. + +++++++++++++.++. ++.. +++
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~-V~v 165 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP-VTM 165 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC-EEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC-EEE
Confidence 665432 22 1 1211111112224567888888888888774 4 79999999999987641 0123 555
Q ss_pred EEe------------------------------------------cC--cEEEeeEEEecCCcchHHHhhhCCCCCc
Q 030042 145 HLV------------------------------------------DG--TIVKTKFLIGCDGIHSTVAWWLGLSEPL 177 (184)
Q Consensus 145 ~~~------------------------------------------~g--~~~~a~~vI~a~G~~s~~~~~~~~~~~~ 177 (184)
.+. +| ++++||+||+|+|++|.+|+.++++.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g 242 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIG 242 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEE
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCC
Confidence 432 45 5799999999999999999999987653
No 17
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.91 E-value=8e-23 Score=158.32 Aligned_cols=169 Identities=22% Similarity=0.271 Sum_probs=126.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCcc-ceEEEec
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVN-RISVTNL 81 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (184)
|+++||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+.+...++.+|+++.+........ ...+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~-~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR-YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC-CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC-CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 456899999999999999999999999999999986443 34577888999999999999988876654332 2233332
Q ss_pred CCCceeeeecCCCC--C-CCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEe-cC--cEEE
Q 030042 82 GTGATQETSLTGKF--G-DGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLV-DG--TIVK 153 (184)
Q Consensus 82 ~~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~-~g--~~~~ 153 (184)
.......+.+.... . ..+..+.+++..+.+.|.+.+. |++++++++|+++...+ ++. +.|.+. +| .++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~-~~V~~~~~G~~~~i~ 176 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD--PDR-VVLTVRRGGESVTVE 176 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTC-EEEEEEETTEEEEEE
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCE-EEEEEecCCceEEEE
Confidence 22222233333221 1 1124567889999998888774 89999999999998764 344 777776 66 5799
Q ss_pred eeEEEecCCcchHHHhhhCCCC
Q 030042 154 TKFLIGCDGIHSTVAWWLGLSE 175 (184)
Q Consensus 154 a~~vI~a~G~~s~~~~~~~~~~ 175 (184)
||+||+|+|.+|.+++.++.+.
T Consensus 177 AdlVV~AdG~~S~lr~~lg~~~ 198 (591)
T 3i3l_A 177 SDFVIDAGGSGGPISRKLGVRQ 198 (591)
T ss_dssp ESEEEECCGGGCHHHHHHTCEE
T ss_pred cCEEEECCCCcchhHHHcCCCC
Confidence 9999999999999999887653
No 18
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.90 E-value=3.1e-23 Score=158.82 Aligned_cols=168 Identities=16% Similarity=0.163 Sum_probs=120.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHH-HHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAW-LALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
+++||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+... ..++.+|+++.+..............+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC-CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 46899999999999999999999999999999986432 234455555544 4788899998887766555443333322
Q ss_pred CC-ceeeeecCCCC-CCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCc-ceEEEEecCc--EEEee
Q 030042 83 TG-ATQETSLTGKF-GDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSS-PVFIHLVDGT--IVKTK 155 (184)
Q Consensus 83 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~-~~~v~~~~g~--~~~a~ 155 (184)
.. ......+.... ......+.+++..+.+.|.+.+. +++++++++|+++...+ +.. .+.+.+.+|+ ++.||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcC
Confidence 22 11223333221 11224567889999999888774 89999999999999865 221 1445556674 89999
Q ss_pred EEEecCCcchHHHhhhCCC
Q 030042 156 FLIGCDGIHSTVAWWLGLS 174 (184)
Q Consensus 156 ~vI~a~G~~s~~~~~~~~~ 174 (184)
+||+|+|.+|.+++.++.+
T Consensus 163 ~VI~AdG~~S~vr~~lg~~ 181 (512)
T 3e1t_A 163 FIVDASGNRTRVSQAVGER 181 (512)
T ss_dssp EEEECCCTTCSSGGGTCCE
T ss_pred EEEECCCcchHHHHHcCCC
Confidence 9999999999999988753
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.90 E-value=4e-23 Score=153.43 Aligned_cols=164 Identities=18% Similarity=0.228 Sum_probs=115.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC-ccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG-TGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
|+++||+|||||++|+++|+.|+++|++|+|+|+.+..+. ...+..+. .+.++.+|+++...........+.+...
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 78 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSFIANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTTEEEEESEEEEECT
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHHhhhhcceEEEEcC
Confidence 4579999999999999999999999999999999886544 33333333 3567777776543322333444454443
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceE-EEEe---cCcEEEee
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVF-IHLV---DGTIVKTK 155 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~-v~~~---~g~~~~a~ 155 (184)
.......+.... ......+.+++..+.+.|.+.+. |++++++++|+++...+ .. +. |.+. ++.++.||
T Consensus 79 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~---~~-v~gv~~~~~~~~~~~~a~ 152 (397)
T 3cgv_A 79 SEKRPIILQSEK--AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN---GK-VAGAKIRHNNEIVDVRAK 152 (397)
T ss_dssp TCSSCEEEC-------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET---TE-EEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeccc--cCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC---CE-EEEEEEEECCeEEEEEcC
Confidence 322212222211 11224568899999999888775 89999999999998875 33 43 5553 45689999
Q ss_pred EEEecCCcchHHHhhhCCCC
Q 030042 156 FLIGCDGIHSTVAWWLGLSE 175 (184)
Q Consensus 156 ~vI~a~G~~s~~~~~~~~~~ 175 (184)
+||+|+|.+|.+++.++++.
T Consensus 153 ~vV~A~G~~s~~~~~~g~~~ 172 (397)
T 3cgv_A 153 MVIAADGFESEFGRWAGLKS 172 (397)
T ss_dssp EEEECCCTTCHHHHHHTCCT
T ss_pred EEEECCCcchHhHHhcCCCc
Confidence 99999999999999998776
No 20
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.90 E-value=1.4e-23 Score=156.00 Aligned_cols=164 Identities=19% Similarity=0.297 Sum_probs=120.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC--CCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL--RGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
++||+|||||++|+++|+.|++.|++|+|+|+.+.+ ....++..+.+.+.+.++.+|+++.+.....+...+.+....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 489999999999999999999999999999997642 122333458899999999999999988766666666555432
Q ss_pred CCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEE-ecCc--EEEeeEE
Q 030042 83 TGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDGT--IVKTKFL 157 (184)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g~--~~~a~~v 157 (184)
....+.+... ..+.....+.+..+.+.|.+.+. +++++++++|+++...+ ++. +.|.+ .+|+ +++||+|
T Consensus 82 --~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~~v~~~~~g~~~~~~a~~v 155 (394)
T 1k0i_A 82 --QRRRIDLKRL-SGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQ--GER-PYVTFERDGERLRLDCDYI 155 (394)
T ss_dssp --EEEEECHHHH-HTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTT--SSS-CEEEEEETTEEEEEECSEE
T ss_pred --ceEEeccccc-cCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEec--CCc-eEEEEecCCcEEEEEeCEE
Confidence 1122222111 01223445667777777776653 89999999999998764 233 66776 6786 7999999
Q ss_pred EecCCcchHHHhhhCCC
Q 030042 158 IGCDGIHSTVAWWLGLS 174 (184)
Q Consensus 158 I~a~G~~s~~~~~~~~~ 174 (184)
|+|||.+|.+|+.++.+
T Consensus 156 V~AdG~~S~vr~~l~~~ 172 (394)
T 1k0i_A 156 AGCDGFHGISRQSIPAE 172 (394)
T ss_dssp EECCCTTCSTGGGSCGG
T ss_pred EECCCCCcHHHHhcCcc
Confidence 99999999999988754
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.85 E-value=7.2e-21 Score=143.75 Aligned_cols=158 Identities=16% Similarity=0.107 Sum_probs=106.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC--CCccceeeecccHHHHHHHcCChHHHHh-cCCCccceEEEe
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL--RGTGAAISFAPNAWLALDALGVSHKLAS-IYPPVNRISVTN 80 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (184)
+++||+|||||++|+++|+.|+++|++|+|+|+.+.+ +...++..+ +.+.++.+++...... .......+..+.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 3689999999999999999999999999999998653 222333334 4566777766542211 111122222222
Q ss_pred cCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEE
Q 030042 81 LGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVK 153 (184)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~ 153 (184)
.... ..+.+. .....+++..+.+.|.+.+. +++++++++|+++..++ +....|.+. +|+ ++.
T Consensus 82 ~~~~--~~~~~~------~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~---~~v~gv~~~~~~~G~~~~~~ 150 (453)
T 3atr_A 82 PDMQ--TVWTVN------GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED---GYVKGAVLFNRRTNEELTVY 150 (453)
T ss_dssp TTSS--CEEEEE------EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET---TEEEEEEEEETTTTEEEEEE
T ss_pred CCCc--eEEeEC------CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC---CEEEEEEEEEcCCCceEEEE
Confidence 1111 111111 02356889999998888764 89999999999998765 221224443 665 799
Q ss_pred eeEEEecCCcchHHHhhhCCCC
Q 030042 154 TKFLIGCDGIHSTVAWWLGLSE 175 (184)
Q Consensus 154 a~~vI~a~G~~s~~~~~~~~~~ 175 (184)
||+||+|+|.+|.+++.++...
T Consensus 151 ad~VV~AdG~~s~vr~~l~~~~ 172 (453)
T 3atr_A 151 SKVVVEATGYSRSFRSKLPPEL 172 (453)
T ss_dssp CSEEEECCGGGCTTGGGSCTTS
T ss_pred cCEEEECcCCchhhHHhcCCCC
Confidence 9999999999999999888754
No 22
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.84 E-value=3.5e-20 Score=142.72 Aligned_cols=171 Identities=16% Similarity=0.165 Sum_probs=115.9
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHh---CCCCeEEEeccCCCCCccceeeecccHHH-HHHHcCChHH--HHhcCCCcc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKR---LGVEPLVLEKSDGLRGTGAAISFAPNAWL-ALDALGVSHK--LASIYPPVN 74 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~ 74 (184)
|++..+||+|||||++|+++|+.|++ .|++|+|||+... ...+.+..+.+.... +++.+|+.+. +........
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~-~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~ 79 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI-PRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFK 79 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS-CCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEE
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC-CCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhh
Confidence 66667999999999999999999999 9999999999653 334446777788888 8888888754 433222211
Q ss_pred -ceEEEecCCC------ceeeeecC------------------------C----------------------CCCCCCCC
Q 030042 75 -RISVTNLGTG------ATQETSLT------------------------G----------------------KFGDGSGP 101 (184)
Q Consensus 75 -~~~~~~~~~~------~~~~~~~~------------------------~----------------------~~~~~~~~ 101 (184)
.+.+..+... ......+. + .....+..
T Consensus 80 ~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 159 (538)
T 2aqj_A 80 AAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHA 159 (538)
T ss_dssp CEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCE
T ss_pred CCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCcc
Confidence 1112111110 00000000 0 00011245
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchHH-HhhhCCCC
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHSTV-AWWLGLSE 175 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~~-~~~~~~~~ 175 (184)
..+++..+.+.|.+.+. |++++++ +|+++...++ +.. +.|.+.+|+++.||+||+|+|.+|.+ ++.++.+.
T Consensus 160 ~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~-~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~ 233 (538)
T 2aqj_A 160 WHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYI-SNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPF 233 (538)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCE-EEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCE
T ss_pred EEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcE-EEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCc
Confidence 67899999999888774 8999999 8999987542 223 67888888889999999999999987 55666653
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.84 E-value=6.2e-20 Score=141.01 Aligned_cols=171 Identities=16% Similarity=0.189 Sum_probs=117.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHh------------CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHH--H
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKR------------LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHK--L 66 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~------------~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 66 (184)
|++..+||+|||||++|+++|..|++ .|++|+|+|+...+ ..+.+..+.+.+...++.+|+.+. +
T Consensus 3 m~~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~-~~g~g~~~~p~~~~~l~~lGi~e~~~~ 81 (526)
T 2pyx_A 3 MQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA-TIGVGEGTWPSMRSTLSKIGIDENDFI 81 (526)
T ss_dssp GGSCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC-CCCSCEECCTHHHHHHHHHTCCHHHHH
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC-CcceeeechHhHHHHHHHcCCCHHHHH
Confidence 44457899999999999999999999 89999999986543 344577888999999999999985 5
Q ss_pred HhcCCC-ccceEEEecCC------CceeeeecC---------------------------------------------CC
Q 030042 67 ASIYPP-VNRISVTNLGT------GATQETSLT---------------------------------------------GK 94 (184)
Q Consensus 67 ~~~~~~-~~~~~~~~~~~------~~~~~~~~~---------------------------------------------~~ 94 (184)
...... ...+.+..+.. .......+. ..
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~ 161 (526)
T 2pyx_A 82 RQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQ 161 (526)
T ss_dssp HHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCT
T ss_pred HHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccc
Confidence 544322 22222221111 000000000 00
Q ss_pred C-CCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchHH-Hh
Q 030042 95 F-GDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHSTV-AW 169 (184)
Q Consensus 95 ~-~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~~-~~ 169 (184)
. ........+++..+.+.|.+.+ .|++++++ +|+++...++ +.. +.|.+.+|.++.||+||+|+|.+|.+ ++
T Consensus 162 ~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~-~~v~~~~g~~i~ad~vV~AdG~~S~~~~~ 238 (526)
T 2pyx_A 162 YHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDI-EKLITKQNGEISGQLFIDCTGAKSLLLGE 238 (526)
T ss_dssp TCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCE-EEEEESSSCEEECSEEEECSGGGCCCCCC
T ss_pred cCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcE-EEEEECCCCEEEcCEEEECCCcchHHHHH
Confidence 0 0011346789999988887765 37899999 6999987542 222 56778887789999999999999987 67
Q ss_pred hhCCCC
Q 030042 170 WLGLSE 175 (184)
Q Consensus 170 ~~~~~~ 175 (184)
.++.+.
T Consensus 239 ~lg~~~ 244 (526)
T 2pyx_A 239 HLQVPF 244 (526)
T ss_dssp CTCCCE
T ss_pred HhCCCc
Confidence 777654
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.84 E-value=1.5e-19 Score=140.18 Aligned_cols=158 Identities=24% Similarity=0.266 Sum_probs=105.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhC------CCCeEEEeccCCCCCc-cceeeecccHHHHHHHcCChHHHHhcCCCcc---
Q 030042 5 EKDVVIIGAGIAGLATALALKRL------GVEPLVLEKSDGLRGT-GAAISFAPNAWLALDALGVSHKLASIYPPVN--- 74 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~------g~~v~vie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 74 (184)
++||+|||||++|+++|+.|++. |++|+|+||.+.++.. ..+..+.+.+++.+ +. .+.....+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~---~~~~~g~~~~~~~ 109 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FP---DWKEKGAPLNTPV 109 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CT---THHHHTCCCCEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HH---HHHhcCCceeeee
Confidence 58999999999999999999998 9999999998776543 34556777665554 22 2222222221
Q ss_pred ---ceEEEecCCCceeeeecCCC-CCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEe-
Q 030042 75 ---RISVTNLGTGATQETSLTGK-FGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLV- 147 (184)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~- 147 (184)
.+.+.. ......+++... .......+.+++..+.++|.+.+. +++++++++|+++..+++ +.. +.|.+.
T Consensus 110 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V-~gV~~~~ 185 (584)
T 2gmh_A 110 TEDRFGILT--EKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED-GSV-KGIATND 185 (584)
T ss_dssp CEEEEEEEC--SSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSE-EEEEECC
T ss_pred chhheeeec--cCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCE-EEEEeCC
Confidence 122221 111111111010 111223567889999999988774 899999999999987652 222 346665
Q ss_pred -----cC---------cEEEeeEEEecCCcchHHHhhh
Q 030042 148 -----DG---------TIVKTKFLIGCDGIHSTVAWWL 171 (184)
Q Consensus 148 -----~g---------~~~~a~~vI~a~G~~s~~~~~~ 171 (184)
+| .++.||+||+|+|.+|.+++.+
T Consensus 186 ~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l 223 (584)
T 2gmh_A 186 VGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQL 223 (584)
T ss_dssp EEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHH
T ss_pred ccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHH
Confidence 33 5899999999999999988765
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.83 E-value=1.1e-19 Score=140.35 Aligned_cols=171 Identities=15% Similarity=0.148 Sum_probs=117.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHh---CCCCeEEEeccCCCCCccceeeecccHHH-HHHHcCChHH--HHhcCCCc-
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKR---LGVEPLVLEKSDGLRGTGAAISFAPNAWL-ALDALGVSHK--LASIYPPV- 73 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~- 73 (184)
|++..+||+|||||++|+++|+.|++ .|++|+|||+.+. ...+.+..+.+.... .++.+|+.+. +.......
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~-~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~ 99 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI-PTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYK 99 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC-CCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEE
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC-CccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEE
Confidence 55557899999999999999999999 9999999999653 334456777788888 8899998865 54433222
Q ss_pred cceEEEecCCC--------------ceeeeecC-----------------------C---------------CC------
Q 030042 74 NRISVTNLGTG--------------ATQETSLT-----------------------G---------------KF------ 95 (184)
Q Consensus 74 ~~~~~~~~~~~--------------~~~~~~~~-----------------------~---------------~~------ 95 (184)
..+.+..+... ......+. . ..
T Consensus 100 ~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 100 VAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp CEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred EeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 22222222111 00000010 0 00
Q ss_pred C---CCCCCeeeeHHHHHHHHHhhCC---CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchHH-H
Q 030042 96 G---DGSGPRFIHRKKLLQTLADELP---NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHSTV-A 168 (184)
Q Consensus 96 ~---~~~~~~~~~~~~l~~~l~~~~~---~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~~-~ 168 (184)
. .....+.+++..+.+.|.+.+. |++++++ +|+++...++ +.. +.|.+.+|+++.||+||+|+|.+|.+ +
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~-~~v~~~~G~~i~ad~vI~A~G~~S~~~~ 256 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNI-ESVRTATGRVFDADLFVDCSGFRGLLIN 256 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCE-EEEEETTSCEEECSEEEECCGGGCCCCC
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCE-EEEEECCCCEEECCEEEECCCCchhhHH
Confidence 0 0123456899999999888773 7899999 9999987542 233 67888888889999999999999987 6
Q ss_pred hhhCCCC
Q 030042 169 WWLGLSE 175 (184)
Q Consensus 169 ~~~~~~~ 175 (184)
+.++.+.
T Consensus 257 ~~lg~~~ 263 (550)
T 2e4g_A 257 KAMEEPF 263 (550)
T ss_dssp CCTCCCE
T ss_pred HHhCCCc
Confidence 6777653
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.82 E-value=1.9e-19 Score=137.85 Aligned_cols=166 Identities=17% Similarity=0.209 Sum_probs=110.8
Q ss_pred cccEEEECCCHHHHHHHHHHHh---CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHH--HHhcCCCcc-ceEE
Q 030042 5 EKDVVIIGAGIAGLATALALKR---LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHK--LASIYPPVN-RISV 78 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~ 78 (184)
.+||+|||||++|+++|+.|++ .|++|+|+|+... ...+.+..+.+.....++.+|+.+. +........ ...+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~-~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV-RRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC-CceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 4799999999999999999999 9999999999753 3345566677888889999998864 444332211 1111
Q ss_pred EecCC-Cce--e------------------------------------------------eeec----C---CCC----C
Q 030042 79 TNLGT-GAT--Q------------------------------------------------ETSL----T---GKF----G 96 (184)
Q Consensus 79 ~~~~~-~~~--~------------------------------------------------~~~~----~---~~~----~ 96 (184)
..+.. ... . ...+ . ... .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 11110 000 0 0001 0 000 0
Q ss_pred C--CCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchHH-Hhhh
Q 030042 97 D--GSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHSTV-AWWL 171 (184)
Q Consensus 97 ~--~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~~-~~~~ 171 (184)
. ......+++..+.+.|.+.+. |++++++ +|+++..+++ +.. +.|.+.+|+++.||+||+|+|.+|.+ ++.+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~-~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~ 237 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDER-GWI-SGVHTKQHGEISGDLFVDCTGFRGLLINQTL 237 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCE-EEEEESSSCEEECSEEEECCGGGCCCCCCCT
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCE-EEEEECCCCEEEcCEEEECCCcchHHHHHHh
Confidence 0 224467899999999988774 8999999 9999987542 233 67888888889999999999999987 5566
Q ss_pred CCC
Q 030042 172 GLS 174 (184)
Q Consensus 172 ~~~ 174 (184)
+.+
T Consensus 238 g~~ 240 (511)
T 2weu_A 238 GGR 240 (511)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 27
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.79 E-value=4.7e-18 Score=126.32 Aligned_cols=173 Identities=19% Similarity=0.164 Sum_probs=101.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC--Ccc-ceee-e----ccc-H-HHHHHHcCChHHHHhc-
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR--GTG-AAIS-F----APN-A-WLALDALGVSHKLASI- 69 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~--~~~-~~~~-~----~~~-~-~~~~~~~~~~~~~~~~- 69 (184)
|+ .++||+|||||++|+++|+.|+++|.+|+|+|+..... +.+ .... + ... . ....+.+..++++.+.
T Consensus 1 M~-~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (397)
T 2oln_A 1 MT-ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRC 79 (397)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHh
Confidence 54 35899999999999999999999999999999987654 211 1111 1 110 0 0111222233333221
Q ss_pred CCC----ccceEEEecCC-----------------Cce-eee-------ecCCCCC-------CCCCCeeeeHHHHHHHH
Q 030042 70 YPP----VNRISVTNLGT-----------------GAT-QET-------SLTGKFG-------DGSGPRFIHRKKLLQTL 113 (184)
Q Consensus 70 ~~~----~~~~~~~~~~~-----------------~~~-~~~-------~~~~~~~-------~~~~~~~~~~~~l~~~l 113 (184)
... ...+....... +.. ..+ .++.... ..+....+++..+.+.|
T Consensus 80 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l 159 (397)
T 2oln_A 80 ERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAAL 159 (397)
T ss_dssp TCCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHH
T ss_pred CccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHH
Confidence 100 00111111100 000 000 0111000 01123467777888877
Q ss_pred HhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch-HHHhhhCCCCCccc
Q 030042 114 ADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS-TVAWWLGLSEPLNV 179 (184)
Q Consensus 114 ~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s-~~~~~~~~~~~~~~ 179 (184)
.+.+. +++++++++|+++...+ +. +.|.+.++ ++.||.||+|+|+++ .+.+.++...|..+
T Consensus 160 ~~~a~~~Gv~i~~~~~V~~i~~~~---~~-v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~p~~~ 223 (397)
T 2oln_A 160 FTLAQAAGATLRAGETVTELVPDA---DG-VSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARLAYSV 223 (397)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEET---TE-EEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCCCEEE
T ss_pred HHHHHHcCCEEECCCEEEEEEEcC---Ce-EEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCCCeeE
Confidence 77653 89999999999998765 44 77777666 799999999999985 57777876666544
No 28
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.78 E-value=3.9e-19 Score=132.71 Aligned_cols=150 Identities=21% Similarity=0.190 Sum_probs=93.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc------cee-ee---c---------ccHHHHHHHcC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG------AAI-SF---A---------PNAWLALDALG 61 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~------~~~-~~---~---------~~~~~~~~~~~ 61 (184)
|.+.++||+|||||++|+++|+.|+++|.+|+|+|+.+.++... +.. .- . ......+..+.
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR 102 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC
Confidence 44467899999999999999999999999999999988764321 110 00 0 00111222221
Q ss_pred Ch---HHHHhcCCCccceEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCC
Q 030042 62 VS---HKLASIYPPVNRISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTH 136 (184)
Q Consensus 62 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~ 136 (184)
.. +.+..... .+.... .+..+....+..+.+.|.+.+. +++++++++|+++...+
T Consensus 103 ~~~~~~~~~~~Gi-----~~~~~~--------------~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~- 162 (417)
T 3v76_A 103 PQDFVALVERHGI-----GWHEKT--------------LGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA- 162 (417)
T ss_dssp HHHHHHHHHHTTC-----CEEECS--------------TTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-
T ss_pred HHHHHHHHHHcCC-----CcEEee--------------CCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-
Confidence 11 11111111 111100 0100112335677777777664 89999999999998775
Q ss_pred CCCcceEEEEecCcEEEeeEEEecCCcch-----------HHHhhhCCC
Q 030042 137 DGSSPVFIHLVDGTIVKTKFLIGCDGIHS-----------TVAWWLGLS 174 (184)
Q Consensus 137 ~~~~~~~v~~~~g~~~~a~~vI~a~G~~s-----------~~~~~~~~~ 174 (184)
+. +.|.+.+| ++.||.||+|+|.+| .+++.+|..
T Consensus 163 --~~-~~V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 163 --SG-FRVTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp --TE-EEEEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred --CE-EEEEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 44 88888888 899999999999987 466677765
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.77 E-value=1.4e-18 Score=132.60 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=102.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
.+||+|||||++|+++|+.|++.|.+|+|||+.+..+.. +...+.+.+.+.+..+|+++....
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~-~~~~~~~~~~~~l~~~g~~~~~~~---------------- 154 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH-NVLHLWPFTIHDLRALGAKKFYGR---------------- 154 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC-CEEECCHHHHHHHHTTTHHHHCTT----------------
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC-CcccCChhHHHHHHHcCCcccccc----------------
Confidence 589999999999999999999999999999998776433 455667777777877776543210
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEE--e-cC--cEEEeeEE
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHL--V-DG--TIVKTKFL 157 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~--~-~g--~~~~a~~v 157 (184)
|. ......+++..+.+.|.+.+. +++++++++|+++...+++++. +.|.+ . +| .++.||+|
T Consensus 155 ------~~-----~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~-~~v~~~~~~~g~~~~i~ad~V 222 (497)
T 2bry_A 155 ------FC-----TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSG-WRAQLQPNPPAQLASYEFDVL 222 (497)
T ss_dssp ------TT-----CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCC-BEEEEESCCCHHHHTCCBSEE
T ss_pred ------cc-----ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCE-EEEEEEECCCCCEEEEEcCEE
Confidence 00 001224667777777777663 8999999999999875311244 66766 3 55 47899999
Q ss_pred EecCCcchHHHhhhC
Q 030042 158 IGCDGIHSTVAWWLG 172 (184)
Q Consensus 158 I~a~G~~s~~~~~~~ 172 (184)
|+|+|.+|.+++..+
T Consensus 223 V~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 223 ISAAGGKFVPEGFTI 237 (497)
T ss_dssp EECCCTTCCCTTCEE
T ss_pred EECCCCCcccccccc
Confidence 999999998876544
No 30
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.77 E-value=2.8e-17 Score=120.67 Aligned_cols=71 Identities=13% Similarity=0.280 Sum_probs=57.6
Q ss_pred CeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecC--cEEEeeEEEecCCcch-HHHhhh-CCC
Q 030042 101 PRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG--TIVKTKFLIGCDGIHS-TVAWWL-GLS 174 (184)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g--~~~~a~~vI~a~G~~s-~~~~~~-~~~ 174 (184)
...+++..+.+.|.+.+. |++++++++|+++...+ +.. +.|.+.+| .++.||.||+|+|.+| .+.+.+ |++
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~-~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRP--EGG-FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECT--TSS-EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC--Cce-EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 446778888888887764 89999999999999875 233 77888888 4899999999999998 577777 765
No 31
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.75 E-value=8.1e-18 Score=124.38 Aligned_cols=73 Identities=10% Similarity=0.136 Sum_probs=58.1
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceE-EEEecCcEEEeeEEEecCCcch-HHHhhhCCC--C
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVF-IHLVDGTIVKTKFLIGCDGIHS-TVAWWLGLS--E 175 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~-v~~~~g~~~~a~~vI~a~G~~s-~~~~~~~~~--~ 175 (184)
..+++..+.+.|.+.+. +++++++++|+++...+ +. +. |.+.+| ++.||.||+|+|.++ .+.+.++.. .
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~~-v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~ 218 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN---NE-IKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKI 218 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS---SB-EEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCC
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC---CE-EEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCc
Confidence 45678888888877764 89999999999998765 33 55 888777 799999999999998 577777766 5
Q ss_pred Cccc
Q 030042 176 PLNV 179 (184)
Q Consensus 176 ~~~~ 179 (184)
|.++
T Consensus 219 ~~~~ 222 (382)
T 1y56_B 219 PIEP 222 (382)
T ss_dssp CCEE
T ss_pred CCCe
Confidence 6554
No 32
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.75 E-value=3.5e-19 Score=131.80 Aligned_cols=142 Identities=16% Similarity=0.144 Sum_probs=99.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCCh-HH-HHhcCCCccceEEEec
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVS-HK-LASIYPPVNRISVTNL 81 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 81 (184)
.||+|||||++|+++|+.|+++ |++|+|+|+.+.+...+++..+.+.+...+...+++ +. +.........+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 999999999988777788888887766522111222 22 222222333343333
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEe
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIG 159 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~ 159 (184)
. +.. +.. ..+.....+.+.++.+.|.+.++ +++++++++|++++... ++.||+||+
T Consensus 80 ~-g~~--~~~----~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~---------------~~~ad~vV~ 137 (381)
T 3c4a_A 80 H-NEP--SLM----STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGELP---------------LADYDLVVL 137 (381)
T ss_dssp S-SSE--EEC----CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGCC---------------GGGCSEEEE
T ss_pred C-Cee--EEe----cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhcc---------------cccCCEEEE
Confidence 1 111 111 11233457899999999988774 78999999998876421 246999999
Q ss_pred cCCcchHHHhhh
Q 030042 160 CDGIHSTVAWWL 171 (184)
Q Consensus 160 a~G~~s~~~~~~ 171 (184)
|+|.+|. |+.+
T Consensus 138 AdG~~S~-R~~l 148 (381)
T 3c4a_A 138 ANGVNHK-TAHF 148 (381)
T ss_dssp CCGGGGG-TCCS
T ss_pred CCCCCch-HHhh
Confidence 9999999 8876
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.75 E-value=3.8e-18 Score=128.36 Aligned_cols=61 Identities=16% Similarity=0.221 Sum_probs=51.6
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCc---eEEEEeccCCCCCcceE-EEEecCcEEEeeEEEecCCcchH
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSS---KIAAIDSQTHDGSSPVF-IHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~---~v~~~~~~~~~~~~~~~-v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
..+++..+...|.+.+. |+++++++ +|+++...+ .. +. |.+.+|+++.||.||+|+|+++.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~---~~-v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN---ND-VKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET---TE-EEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC---Ce-EEEEEECCCCEEECCEEEECCCCChh
Confidence 57778888888888774 89999999 999998765 33 55 89999988999999999999984
No 34
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.75 E-value=2e-18 Score=127.41 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=60.6
Q ss_pred CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch-HHHhhhCCC-C
Q 030042 100 GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS-TVAWWLGLS-E 175 (184)
Q Consensus 100 ~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s-~~~~~~~~~-~ 175 (184)
....+++..+.+.|.+.+. |++++++++|+++...+ +. +.|.+.+| ++.||.||+|+|.++ .+.+.++.. .
T Consensus 147 ~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~~-~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~ 221 (381)
T 3nyc_A 147 TGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD---GA-WEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVRPL 221 (381)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET---TE-EEEECSSE-EEEESEEEECCGGGHHHHHHHHTCCCC
T ss_pred CCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC---Ce-EEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCCCC
Confidence 3456788888888888774 89999999999999875 44 88888887 799999999999998 577778865 3
Q ss_pred Cccc
Q 030042 176 PLNV 179 (184)
Q Consensus 176 ~~~~ 179 (184)
|.++
T Consensus 222 ~~~p 225 (381)
T 3nyc_A 222 GLQP 225 (381)
T ss_dssp CCEE
T ss_pred ceee
Confidence 4443
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.74 E-value=7.1e-18 Score=125.50 Aligned_cols=74 Identities=11% Similarity=0.089 Sum_probs=58.4
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch-HHHhhhCCCCCcc
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS-TVAWWLGLSEPLN 178 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s-~~~~~~~~~~~~~ 178 (184)
.++++..+.+.|.+.+. +++++++++|+++...+ +.. +.|.+.+| ++.||.||+|+|.++ .+++.++...|..
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~ 244 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKV-TGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQ 244 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBE-EEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEE
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEE-EEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCcc
Confidence 45567778777777664 89999999999998765 233 67888887 799999999999998 6788888776655
Q ss_pred c
Q 030042 179 V 179 (184)
Q Consensus 179 ~ 179 (184)
+
T Consensus 245 ~ 245 (405)
T 2gag_B 245 S 245 (405)
T ss_dssp E
T ss_pred c
Confidence 4
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.74 E-value=1.9e-17 Score=130.61 Aligned_cols=71 Identities=6% Similarity=0.106 Sum_probs=57.4
Q ss_pred CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH-HHhhhCCC
Q 030042 100 GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST-VAWWLGLS 174 (184)
Q Consensus 100 ~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~-~~~~~~~~ 174 (184)
....+++..+...|.+.+. |++++++++|+++...+ .. |.|.+.+|.++.||.||+|+|.++. +.+..+++
T Consensus 410 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 410 QGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD---DC-WLLNFAGDQQATHSVVVLANGHQISRFSQTSTLP 483 (676)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET---TE-EEEEETTSCEEEESEEEECCGGGGGCSTTTTTCS
T ss_pred CCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC---Ce-EEEEECCCCEEECCEEEECCCcchhccccccCCc
Confidence 3456778888888888764 89999999999999876 44 8889888888999999999999985 55555543
No 37
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.73 E-value=1.6e-16 Score=117.62 Aligned_cols=169 Identities=18% Similarity=0.216 Sum_probs=100.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC--Cccc-eee-----ecc--cHHH-HHHHcCChHHHHhcCC-C
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR--GTGA-AIS-----FAP--NAWL-ALDALGVSHKLASIYP-P 72 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~--~~~~-~~~-----~~~--~~~~-~~~~~~~~~~~~~~~~-~ 72 (184)
++||+|||||++|+++|+.|+++|.+|+|+|+....+ +.+. ... +.. .... ..+....++.+..... .
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999987554 2221 111 111 1111 1122223333332111 0
Q ss_pred ---ccceEEEecC-CC--------------ce-eee-------ecCCCCCC-------CCCCeeeeHHHHHHHHHhhCC-
Q 030042 73 ---VNRISVTNLG-TG--------------AT-QET-------SLTGKFGD-------GSGPRFIHRKKLLQTLADELP- 118 (184)
Q Consensus 73 ---~~~~~~~~~~-~~--------------~~-~~~-------~~~~~~~~-------~~~~~~~~~~~l~~~l~~~~~- 118 (184)
.......... .. .. ..+ .++..... .+....+++..+.+.|.+.+.
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 0111111111 00 00 000 01110000 122356778888888888774
Q ss_pred -CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH-HHhhhCCCCCcc
Q 030042 119 -NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST-VAWWLGLSEPLN 178 (184)
Q Consensus 119 -~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~-~~~~~~~~~~~~ 178 (184)
|++++++++|++++..+ +. +.|.+.+| ++.||.||+|+|.++. +.+.++...|..
T Consensus 163 ~Gv~i~~~~~v~~i~~~~---~~-~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~~~pl~ 219 (389)
T 2gf3_A 163 RGAKVLTHTRVEDFDISP---DS-VKIETANG-SYTADKLIVSMGAWNSKLLSKLNLDIPLQ 219 (389)
T ss_dssp TTCEEECSCCEEEEEECS---SC-EEEEETTE-EEEEEEEEECCGGGHHHHGGGGTEECCCE
T ss_pred CCCEEEcCcEEEEEEecC---Ce-EEEEeCCC-EEEeCEEEEecCccHHHHhhhhccCCceE
Confidence 89999999999999865 34 77887766 7999999999999874 556666334433
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.73 E-value=2.1e-17 Score=130.62 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=56.1
Q ss_pred CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCc-EEEeeEEEecCCcchH-HHhhhCCC
Q 030042 100 GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGT-IVKTKFLIGCDGIHST-VAWWLGLS 174 (184)
Q Consensus 100 ~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~-~~~a~~vI~a~G~~s~-~~~~~~~~ 174 (184)
....+++..+.+.|.+.+. |++++++++|+++...+ +. +.|.+.+|. ++.||.||+|+|+++. +.+.++++
T Consensus 405 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lp 479 (689)
T 3pvc_A 405 AGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRID---SQ-WQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLP 479 (689)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS---SS-EEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSC
T ss_pred CCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC---Ce-EEEEeCCCcEEEECCEEEECCCcchhccccccCCc
Confidence 3456778888888887764 89999999999999876 44 889998887 8999999999999985 55555544
No 39
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.73 E-value=4.6e-17 Score=118.31 Aligned_cols=148 Identities=18% Similarity=0.197 Sum_probs=87.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceee------------ecccHHHHHHHcCChHHHHhcCC-
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAIS------------FAPNAWLALDALGVSHKLASIYP- 71 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~- 71 (184)
++||+|||||++|+++|+.|++.|++|+|+|+.+.+++...... +........+.+ ..+.....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV---KQWQAQGHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH---HHHHHHTSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH---HHHHhCCCe
Confidence 47999999999999999999999999999999876654322211 111111111111 11111110
Q ss_pred -CccceEEEecCCCceeeeecCCCCCCCCCCeee---eHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe
Q 030042 72 -PVNRISVTNLGTGATQETSLTGKFGDGSGPRFI---HRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV 147 (184)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~ 147 (184)
.+....... ... .+... ........ ....+.+.+.+ +++++++++|++++..+ ++ +.|.+.
T Consensus 79 ~~~~~~~~~~-~~~-----~~~~~--~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~---~~-~~v~~~ 143 (336)
T 1yvv_A 79 AEWTPLLYNF-HAG-----RLSPS--PDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGE---EH-WNLLDA 143 (336)
T ss_dssp EEECCCEEEE-SSS-----BCCCC--CTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECS---SC-EEEEET
T ss_pred eeccccceec-cCc-----ccccC--CCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeC---CE-EEEEeC
Confidence 000000000 000 00000 00011111 23445555554 67899999999999875 45 889999
Q ss_pred cCcEEE-eeEEEecCCcchHHHhh
Q 030042 148 DGTIVK-TKFLIGCDGIHSTVAWW 170 (184)
Q Consensus 148 ~g~~~~-a~~vI~a~G~~s~~~~~ 170 (184)
+|+.+. +|+||+|+|.++..+..
T Consensus 144 ~g~~~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 144 EGQNHGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp TSCEEEEESEEEECSCHHHHGGGG
T ss_pred CCcCccccCEEEEcCCHHHHHHhh
Confidence 987664 99999999999876643
No 40
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.73 E-value=4.7e-17 Score=118.92 Aligned_cols=129 Identities=18% Similarity=0.197 Sum_probs=87.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+++||+|||||++|+++|+.|+++|++|+|+|+.+.+++.... .++ ...... .
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~---------------~~~----------~~~~~~--~ 54 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH---------------AWH----------SLHLFS--P 54 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG---------------SCT----------TCBCSS--C
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC---------------CCC----------CcEecC--c
Confidence 4689999999999999999999999999999998876544211 000 000000 0
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceE-EEEecCcEEEeeEEEec
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVF-IHLVDGTIVKTKFLIGC 160 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~-v~~~~g~~~~a~~vI~a 160 (184)
. ....+...........+..+.++.+++.+.+. +++++++++|+++...+ +. +. |.+.++ ++.+|.||+|
T Consensus 55 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~-~~~v~~~~g-~~~~d~vV~A 127 (357)
T 4a9w_A 55 A--GWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG---ER-LRVVARDGR-QWLARAVISA 127 (357)
T ss_dssp G--GGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET---TE-EEEEETTSC-EEEEEEEEEC
T ss_pred h--hhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC---Cc-EEEEEeCCC-EEEeCEEEEC
Confidence 0 00001111001112223456777777766553 78899999999999875 44 77 888887 8999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|.++.
T Consensus 128 tG~~~~ 133 (357)
T 4a9w_A 128 TGTWGE 133 (357)
T ss_dssp CCSGGG
T ss_pred CCCCCC
Confidence 998764
No 41
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.72 E-value=4.6e-17 Score=121.09 Aligned_cols=152 Identities=21% Similarity=0.217 Sum_probs=91.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc------cce--ee--eccc---------HHHHHHHcCC-
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT------GAA--IS--FAPN---------AWLALDALGV- 62 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~------~~~--~~--~~~~---------~~~~~~~~~~- 62 (184)
|+++||+|||||++|+++|+.|+++|.+|+|+|+.+.++.. ++. .. ..+. ....+..+..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 35799999999999999999999999999999998765321 111 00 0000 0011111110
Q ss_pred --hHHHHhcCCCccceEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCC-
Q 030042 63 --SHKLASIYPPVNRISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHD- 137 (184)
Q Consensus 63 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~- 137 (184)
.+.+...+.+ +.....+ ..+ + . . .+..+.+.|.+.+. +++++++++|+++...++.
T Consensus 82 ~~~~~~~~~Gi~-----~~~~~~g--~~~--p-------~--~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~ 142 (401)
T 2gqf_A 82 DFISLVAEQGIT-----YHEKELG--QLF--C-------D--E-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE 142 (401)
T ss_dssp HHHHHHHHTTCC-----EEECSTT--EEE--E-------T--T-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS
T ss_pred HHHHHHHhCCCc-----eEECcCC--EEc--c-------C--C-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC
Confidence 0111111111 0000000 000 0 0 0 35667777766654 8999999999999865100
Q ss_pred CCcceEEEEecCcEEEeeEEEecCCcch-----------HHHhhhCCCC
Q 030042 138 GSSPVFIHLVDGTIVKTKFLIGCDGIHS-----------TVAWWLGLSE 175 (184)
Q Consensus 138 ~~~~~~v~~~~g~~~~a~~vI~a~G~~s-----------~~~~~~~~~~ 175 (184)
... +.|.+.++ +++||.||+|+|.+| .+++.+|...
T Consensus 143 ~~~-~~v~~~~g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i 189 (401)
T 2gqf_A 143 KVR-FVLQVNST-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPV 189 (401)
T ss_dssp SCC-EEEEETTE-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCE
T ss_pred CCe-EEEEECCC-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCc
Confidence 033 77888776 799999999999988 4666677653
No 42
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.72 E-value=4.8e-17 Score=122.71 Aligned_cols=163 Identities=19% Similarity=0.210 Sum_probs=93.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc------cceeeeccc-HHHHHHHcCChHHHH----hcCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT------GAAISFAPN-AWLALDALGVSHKLA----SIYPP 72 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~ 72 (184)
+++||+|||||++|+++|+.|++.|.+|+|+|+.+.+++. ++....... ...++..+.....+. .....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 4589999999999999999999999999999998765421 111101000 111122111100000 00000
Q ss_pred ccceEEEecCCCceeeeecCCCCCCCC-CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecC
Q 030042 73 VNRISVTNLGTGATQETSLTGKFGDGS-GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG 149 (184)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g 149 (184)
...+.+...... .+.... .+. .........+.+.|.+.+. +++++++++|+++...+ +.. +.|.+.+|
T Consensus 105 ~~~~~~~~~~G~---~~~~~~---~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v-~~V~~~~G 175 (447)
T 2i0z_A 105 EDIITFFENLGV---KLKEED---HGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQT-KAVILQTG 175 (447)
T ss_dssp HHHHHHHHHTTC---CEEECG---GGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEE-EEEEETTC
T ss_pred HHHHHHHHhcCC---ceEEee---CCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcE-EEEEECCC
Confidence 000000000000 000000 000 0000024566666666553 89999999999998754 233 77888888
Q ss_pred cEEEeeEEEecCCcch-----------HHHhhhCCCC
Q 030042 150 TIVKTKFLIGCDGIHS-----------TVAWWLGLSE 175 (184)
Q Consensus 150 ~~~~a~~vI~a~G~~s-----------~~~~~~~~~~ 175 (184)
+++.||.||+|+|.+| .+++.+|...
T Consensus 176 ~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 176 EVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp CEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred CEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 7899999999999999 7888888764
No 43
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.72 E-value=1.6e-17 Score=123.79 Aligned_cols=170 Identities=16% Similarity=0.121 Sum_probs=94.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCcc-c--eeee-cccH------HHHHHHcCChHHHHhc--
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTG-A--AISF-APNA------WLALDALGVSHKLASI-- 69 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~-~--~~~~-~~~~------~~~~~~~~~~~~~~~~-- 69 (184)
.++||+|||||++|+++|+.|+++ |.+|+|||+.....+.+ . +..+ .+.. .-..+.+..+......
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999 99999999975443321 1 1112 1110 0111111112210000
Q ss_pred CCCccc--eE-EEecCC--Cce--e----eee-c------CCC--CCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCce
Q 030042 70 YPPVNR--IS-VTNLGT--GAT--Q----ETS-L------TGK--FGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSK 127 (184)
Q Consensus 70 ~~~~~~--~~-~~~~~~--~~~--~----~~~-~------~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~ 127 (184)
...+.. .. ...... +.. . ..+ + ... ....+....+++..+.+.|.+.+. +++++++++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~ 194 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTR 194 (405)
T ss_dssp CCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCE
T ss_pred CCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCE
Confidence 001110 00 000000 000 0 000 0 000 001123456788888888888764 899999999
Q ss_pred EE---------EEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch-HHHh-hhCCCCCcc
Q 030042 128 IA---------AIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS-TVAW-WLGLSEPLN 178 (184)
Q Consensus 128 v~---------~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s-~~~~-~~~~~~~~~ 178 (184)
|+ ++...+ +. +.|.+.+| ++.||.||+|+|.+| .+++ .+++..|..
T Consensus 195 v~~~~g~~~~~~i~~~~---~~-v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~~~ 251 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTN---TH-QIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTRHG 251 (405)
T ss_dssp EEEETTEEEEECBCC-----------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCCCE
T ss_pred EEeccccccccceEeeC---Ce-EEEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCCcc
Confidence 99 887654 33 56777666 799999999999998 6777 888766543
No 44
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.71 E-value=1.5e-16 Score=123.00 Aligned_cols=69 Identities=13% Similarity=0.014 Sum_probs=53.7
Q ss_pred eeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEec---C--cEEEeeEEEecCCcch-HHHhhhCCC
Q 030042 103 FIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---G--TIVKTKFLIGCDGIHS-TVAWWLGLS 174 (184)
Q Consensus 103 ~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g--~~~~a~~vI~a~G~~s-~~~~~~~~~ 174 (184)
+++...+...+.+.+. |++++++++|+++...+ +.. +.|.+.+ | .++.||.||+|+|.++ .++++++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v-~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKV-VGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEE-EEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeE-EEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 5677788888777663 89999999999999875 233 5566653 3 4799999999999999 678877765
No 45
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.70 E-value=6.1e-17 Score=117.67 Aligned_cols=119 Identities=18% Similarity=0.262 Sum_probs=83.9
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEe
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTN 80 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
|.|+++||+|||||++|+++|+.|++.|.+|+|||+.+..++.. .. . .+. ..+
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~-------------------~~---~-~~~--~~~-- 53 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL-------------------TA---L-YPE--KYI-- 53 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH-------------------HH---T-CTT--SEE--
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee-------------------ec---c-CCC--cee--
Confidence 55567999999999999999999999999999999987654220 00 0 000 000
Q ss_pred cCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEE
Q 030042 81 LGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLI 158 (184)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI 158 (184)
+... ....+.+.++.+.+.+.+. +++++++++|+++...+ +. +.|.+.+|+++.+|.||
T Consensus 54 --------~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~~-~~v~~~~g~~~~~~~lv 114 (335)
T 2zbw_A 54 --------YDVA-------GFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREG---DL-FKVTTSQGNAYTAKAVI 114 (335)
T ss_dssp --------CCST-------TCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEET---TE-EEEEETTSCEEEEEEEE
T ss_pred --------eccC-------CCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECC---CE-EEEEECCCCEEEeCEEE
Confidence 0000 0112445667776666553 68889999999998875 34 88888888889999999
Q ss_pred ecCCcch
Q 030042 159 GCDGIHS 165 (184)
Q Consensus 159 ~a~G~~s 165 (184)
+|+|..+
T Consensus 115 ~AtG~~~ 121 (335)
T 2zbw_A 115 IAAGVGA 121 (335)
T ss_dssp ECCTTSE
T ss_pred ECCCCCC
Confidence 9999865
No 46
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.70 E-value=5.3e-17 Score=119.96 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=57.3
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH-HHhhhCCCCCcc
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST-VAWWLGLSEPLN 178 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~-~~~~~~~~~~~~ 178 (184)
..+++..+.+.|.+.+. +++++++++|+++...+ +. +.|.+.+| ++.||.||+|+|.++. +.+.++...|..
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~~-~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~ 233 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG---EA-LFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFL 233 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS---SS-EEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC---CE-EEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCcee
Confidence 45677788888877764 89999999999998765 34 67777777 8999999999999885 777777655544
Q ss_pred c
Q 030042 179 V 179 (184)
Q Consensus 179 ~ 179 (184)
+
T Consensus 234 ~ 234 (382)
T 1ryi_A 234 P 234 (382)
T ss_dssp E
T ss_pred c
Confidence 3
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.70 E-value=5.3e-16 Score=114.23 Aligned_cols=156 Identities=19% Similarity=0.210 Sum_probs=93.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccce---e-e----ecc--cHH-HHHHHcCChHHHHhcCC--
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAA---I-S----FAP--NAW-LALDALGVSHKLASIYP-- 71 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~---~-~----~~~--~~~-~~~~~~~~~~~~~~~~~-- 71 (184)
++||+|||||++|+++|+.|+++|.+|+|+|+.....+.+.+ . . +.. ... -..+....++.+.+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 589999999999999999999999999999998655322111 0 1 111 011 11122223333331110
Q ss_pred ----CccceEEEecCCCc---------------eeee-------ecCCCC-------CCCCCCeeeeHHHHHHHHHhhCC
Q 030042 72 ----PVNRISVTNLGTGA---------------TQET-------SLTGKF-------GDGSGPRFIHRKKLLQTLADELP 118 (184)
Q Consensus 72 ----~~~~~~~~~~~~~~---------------~~~~-------~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~ 118 (184)
....+.+.. .... ...+ .++... ...+...++++..+.+.|.+.+.
T Consensus 82 ~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 160 (372)
T 2uzz_A 82 PIFVRSGVINLGP-ADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK 160 (372)
T ss_dssp CSEECCCEEEEEE-TTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHH
T ss_pred cceeeeceEEEeC-CCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHH
Confidence 001111111 0000 0000 001000 00123456788888888887764
Q ss_pred --CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH
Q 030042 119 --NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 119 --~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
+++++++++|+++...+ +. +.|.+.+| ++.||.||+|+|.++.
T Consensus 161 ~~G~~i~~~~~V~~i~~~~---~~-~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 161 EAGCAQLFNCPVTAIRHDD---DG-VTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp HTTCEEECSCCEEEEEECS---SS-EEEEESSC-EEEEEEEEECCGGGGG
T ss_pred HCCCEEEcCCEEEEEEEcC---CE-EEEEECCC-eEEcCEEEEcCCccHH
Confidence 89999999999998765 34 78888887 5999999999999874
No 48
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.68 E-value=5.8e-16 Score=111.23 Aligned_cols=113 Identities=19% Similarity=0.218 Sum_probs=72.1
Q ss_pred CCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 2 AMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 2 ~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
+|++|||+||||||+|+++|+.|+|.|.+|+|||+... ++. + . ..+
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-gg~-----~-------------~----~~~----------- 48 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-RNR-----V-------------T----QNS----------- 48 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-GGG-----G-------------S----SCB-----------
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-CCe-----e-------------e----eec-----------
Confidence 47889999999999999999999999999999998642 111 0 0 000
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC-C-CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEe
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL-P-NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIG 159 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~ 159 (184)
..|.. ...+...++.+...+.. + +...+.+..++.+...++ .. +.+.+.+|+++.+|.||+
T Consensus 49 -------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~v~~~~g~~~~a~~lii 111 (304)
T 4fk1_A 49 -------HGFIT-------RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQST--GL-FEIVTKDHTKYLAERVLL 111 (304)
T ss_dssp -------CCSTT-------CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTT--SC-EEEEETTCCEEEEEEEEE
T ss_pred -------CCccC-------CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCC--Cc-EEEEECCCCEEEeCEEEE
Confidence 00000 00123445554444433 2 333444556666665541 33 888999999999999999
Q ss_pred cCCcch
Q 030042 160 CDGIHS 165 (184)
Q Consensus 160 a~G~~s 165 (184)
|||+..
T Consensus 112 ATGs~p 117 (304)
T 4fk1_A 112 ATGMQE 117 (304)
T ss_dssp CCCCEE
T ss_pred ccCCcc
Confidence 999754
No 49
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.68 E-value=2.7e-16 Score=118.63 Aligned_cols=153 Identities=18% Similarity=0.147 Sum_probs=87.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhc-CCCcc------
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASI-YPPVN------ 74 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------ 74 (184)
..+||+|||||++|+++|..|++.|. +|+|||+.+..++........... +++....... ..+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~------~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNK------LPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSC------CCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcc------cccccccccccccccccccccC
Confidence 46899999999999999999999999 999999987665432111000000 0000000000 00000
Q ss_pred c--eEEEec--CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEec
Q 030042 75 R--ISVTNL--GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVD 148 (184)
Q Consensus 75 ~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~ 148 (184)
. ...... .+.......|...........+..+..+.+++.+.+. +..++++++|+++...+ +. |.|.+.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~---~~-~~V~~~~ 154 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD---GS-WVVTYKG 154 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET---TE-EEEEEEE
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC---Ce-EEEEEee
Confidence 0 000000 0000000111111101111234567777777777654 56788999999998765 44 7787765
Q ss_pred ---Cc---EEEeeEEEecCCcchH
Q 030042 149 ---GT---IVKTKFLIGCDGIHST 166 (184)
Q Consensus 149 ---g~---~~~a~~vI~a~G~~s~ 166 (184)
|+ ++.+|.||+|+|.+|.
T Consensus 155 ~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 TKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp SSTTCCEEEEEESEEEECCCSSSS
T ss_pred cCCCCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999763
No 50
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.68 E-value=1.3e-15 Score=101.42 Aligned_cols=116 Identities=23% Similarity=0.327 Sum_probs=83.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
+|++|||||++|+.+|..|++.|.+|+++|+.+...... ...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~--------------------------~~~------------ 43 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV--------------------------SRV------------ 43 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC--------------------------SCC------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc--------------------------hhh------------
Confidence 799999999999999999999999999999976321100 000
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
..+... + ..+...++.+.+.+.+. +++++++ +|++++..+ +. +.+.+++| ++.+|.||+|+|.
T Consensus 44 ---~~~~~~----~--~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~---~~-~~v~~~~g-~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 44 ---PNYPGL----L--DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMG---GV-FEVETEEG-VEKAERLLLCTHK 108 (180)
T ss_dssp ---CCSTTC----T--TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECS---SS-EEEECSSC-EEEEEEEEECCTT
T ss_pred ---hccCCC----c--CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC---CE-EEEEECCC-EEEECEEEECCCC
Confidence 000000 0 01234556666655553 8999999 999998765 44 78888888 8999999999999
Q ss_pred chHHHhhhCCC
Q 030042 164 HSTVAWWLGLS 174 (184)
Q Consensus 164 ~s~~~~~~~~~ 174 (184)
.+.+++.++++
T Consensus 109 ~~~~~~~~g~~ 119 (180)
T 2ywl_A 109 DPTLPSLLGLT 119 (180)
T ss_dssp CCHHHHHHTCC
T ss_pred CCCccccCCCC
Confidence 98887777764
No 51
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.68 E-value=1.7e-16 Score=122.00 Aligned_cols=135 Identities=19% Similarity=0.293 Sum_probs=88.1
Q ss_pred ccccEEEECCCHHHHHHHHHHH-hCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 4 VEKDVVIIGAGIAGLATALALK-RLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~-~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
.++||+|||||++|+++|+.|+ +.|.+|+|+|+.+..++......+. ++ ......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~yp----------g~------------~~d~~s-- 62 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYP----------GA------------LSDTES-- 62 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCT----------TC------------EEEEEG--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCC----------Cc------------eecCCc--
Confidence 3589999999999999999999 8999999999988766432110000 00 000000
Q ss_pred CCceeeeecCCC--CCCCCCCeeeeHHHHHHHHHhhCC--CC--eeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeE
Q 030042 83 TGATQETSLTGK--FGDGSGPRFIHRKKLLQTLADELP--NG--TIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKF 156 (184)
Q Consensus 83 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~ 156 (184)
. ...+.+... ...........+.++.+++.+.+. ++ +++++++|+++..+++ ... |.|.+.+|+++.||+
T Consensus 63 ~--~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~-~~V~~~~G~~i~ad~ 138 (540)
T 3gwf_A 63 H--LYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENL-WEVTTDHGEVYRAKY 138 (540)
T ss_dssp G--GSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-TTE-EEEEETTSCEEEEEE
T ss_pred c--eeeeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-CCE-EEEEEcCCCEEEeCE
Confidence 0 000000000 001112235667777777766553 55 7999999999998762 124 899999999999999
Q ss_pred EEecCCcchH
Q 030042 157 LIGCDGIHST 166 (184)
Q Consensus 157 vI~a~G~~s~ 166 (184)
||+|+|..|.
T Consensus 139 lV~AtG~~s~ 148 (540)
T 3gwf_A 139 VVNAVGLLSA 148 (540)
T ss_dssp EEECCCSCCS
T ss_pred EEECCccccc
Confidence 9999997653
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.68 E-value=6.9e-17 Score=121.85 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=57.7
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCceEEEEec---------------cCCCCCcceEEEEecCcEE--EeeEEEecCC
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSSKIAAIDS---------------QTHDGSSPVFIHLVDGTIV--KTKFLIGCDG 162 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~---------------~~~~~~~~~~v~~~~g~~~--~a~~vI~a~G 162 (184)
..+++.++.+.|.+.+. |++++.+++|+++.. .+ ...+.|.+.+| ++ .||.||+|+|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~---~~v~~V~t~~g-~i~~~Ad~VV~AtG 251 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE---ARASAAVLSDG-TRVEVGEKLVVAAG 251 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC---EEEEEEEETTS-CEEEEEEEEEECCG
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC---CceEEEEeCCC-EEeecCCEEEECCC
Confidence 45677788888887764 899999999999987 32 22256788787 68 9999999999
Q ss_pred cchH-HHhhhCCCCCccc
Q 030042 163 IHST-VAWWLGLSEPLNV 179 (184)
Q Consensus 163 ~~s~-~~~~~~~~~~~~~ 179 (184)
.++. +.+.++...|.++
T Consensus 252 ~~s~~l~~~~g~~~~~~p 269 (448)
T 3axb_A 252 VWSNRLLNPLGIDTFSRP 269 (448)
T ss_dssp GGHHHHHGGGTCCCSEEE
T ss_pred cCHHHHHHHcCCCCcccc
Confidence 9985 7777777766655
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.68 E-value=4.2e-16 Score=119.60 Aligned_cols=157 Identities=16% Similarity=0.281 Sum_probs=87.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHH--H----HhcCCCccceEE
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHK--L----ASIYPPVNRISV 78 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~ 78 (184)
.+||+|||||++|+++|+.|++.|++|+|+|+.+..+..... .........+... + .......+....
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~------~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~ 180 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKD------TFGFWRKRTLNPESNVQFGEGGAGTFSDGKLY 180 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHH------HHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccc------hhcccccccccccccceeccCCcccccCCceE
Confidence 479999999999999999999999999999998653210000 0000000000000 0 000000000000
Q ss_pred EecCC---------------CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcc
Q 030042 79 TNLGT---------------GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSP 141 (184)
Q Consensus 79 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~ 141 (184)
..... +......+... +.........+.+.|.+.+. +++++++++|+++...+ +..
T Consensus 181 ~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~----p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v- 253 (549)
T 3nlc_A 181 SQVKDPNFYGRKVITEFVEAGAPEEILYVSK----PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED--GQI- 253 (549)
T ss_dssp CCSCCTTCHHHHHHHHHHHTTCCGGGGTBSS----CCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBE-
T ss_pred EEeccccccHHHHHHHHHHcCCCceEeeccc----cccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEE-
Confidence 00000 00000000000 11122334566666666553 89999999999998765 233
Q ss_pred eEEEEecCcEEEeeEEEecCCcchH----HHhhhCCC
Q 030042 142 VFIHLVDGTIVKTKFLIGCDGIHST----VAWWLGLS 174 (184)
Q Consensus 142 ~~v~~~~g~~~~a~~vI~a~G~~s~----~~~~~~~~ 174 (184)
+.|.+.+|+++.||.||+|+|+++. ..+..++.
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 6688899989999999999999884 33444554
No 54
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.68 E-value=6.4e-16 Score=119.71 Aligned_cols=156 Identities=18% Similarity=0.183 Sum_probs=89.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccc--eeeecccHHHHHHHcCCh------------------
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGA--AISFAPNAWLALDALGVS------------------ 63 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------------------ 63 (184)
.++||+|||||++|+++|+.|++.|.+|+||||.+..++.+. +-.+........+..++.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999887654321 111111111111111111
Q ss_pred ----------------HHHHhcCCCccceEEEecCCCce-eeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeee
Q 030042 64 ----------------HKLASIYPPVNRISVTNLGTGAT-QETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHF 124 (184)
Q Consensus 64 ----------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~ 124 (184)
+.+.....++... ....+.. ..... +.........+.+.|.+.+. ++++++
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~---~~~~g~~~~r~~~-------~~~~~~~~~~l~~~L~~~~~~~gv~i~~ 269 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDL---KRSGGARVDRTHR-------PHGGKSSGPEIIDTLRKAAKEQGIDTRL 269 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEE---ECCTTCSSCCEEE-------CSSSSCHHHHHHHHHHHHHHHTTCCEEC
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccc---cccCCCCCCceee-------cCCCCCCHHHHHHHHHHHHHhcCCEEEe
Confidence 1111112221110 0000000 00000 00011345667777776653 899999
Q ss_pred CceEEEEeccCCCCCcceEEEE--ecCc--EEEeeEEEecCCcchHHHhhh
Q 030042 125 SSKIAAIDSQTHDGSSPVFIHL--VDGT--IVKTKFLIGCDGIHSTVAWWL 171 (184)
Q Consensus 125 ~~~v~~~~~~~~~~~~~~~v~~--~~g~--~~~a~~vI~a~G~~s~~~~~~ 171 (184)
+++|+++...++ +.. +.|.+ .+|+ ++.||.||+|||.++..++++
T Consensus 270 ~~~v~~l~~~~~-g~v-~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 270 NSRVVKLVVNDD-HSV-VGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp SEEEEEEEECTT-SBE-EEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CCEEEEEEECCC-CcE-EEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 999999987641 122 33443 3675 689999999999998765544
No 55
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.67 E-value=1.7e-16 Score=127.80 Aligned_cols=75 Identities=16% Similarity=0.314 Sum_probs=59.0
Q ss_pred CeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH-HHhhhCCCCCc
Q 030042 101 PRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST-VAWWLGLSEPL 177 (184)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~-~~~~~~~~~~~ 177 (184)
...+++..+...|.+.+. |++++.+++|+++...+ ...+.|.+.+| ++.||.||+|+|.++. +.+.++...|.
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~---~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl 220 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG---GRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPL 220 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---TEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCC
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC---CEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCccc
Confidence 456788888888888774 89999999999998765 33256778777 7999999999999985 56677776665
Q ss_pred cc
Q 030042 178 NV 179 (184)
Q Consensus 178 ~~ 179 (184)
++
T Consensus 221 ~p 222 (830)
T 1pj5_A 221 LP 222 (830)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 56
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.66 E-value=1.1e-15 Score=108.75 Aligned_cols=131 Identities=22% Similarity=0.286 Sum_probs=81.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC-CCCeEEEeccCCCCCccc-------eeeecccHHHHHHHcCChHHHHhcCCCccc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL-GVEPLVLEKSDGLRGTGA-------AISFAPNAWLALDALGVSHKLASIYPPVNR 75 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~-g~~v~vie~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (184)
.++||+|||||++|+++|+.|+++ |.+|+|+|+.+.+++... .........++++++|+ ++..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~---------~~~~ 108 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV---------AYDE 108 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTC---------CCEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCC---------Cccc
Confidence 468999999999999999999997 999999999876643211 11111222233332221 1100
Q ss_pred eEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCCCCcceEEEEe-----
Q 030042 76 ISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHDGSSPVFIHLV----- 147 (184)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~----- 147 (184)
. +......+...+...|.+.+ .+++++++++|+++...+ +.. ..+.+.
T Consensus 109 -------~--------------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v-~gv~~~~~~~~ 164 (284)
T 1rp0_A 109 -------Q--------------DTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRV-GGVVTNWALVA 164 (284)
T ss_dssp -------C--------------SSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEE-EEEEEEEHHHH
T ss_pred -------C--------------CCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeE-EEEEEeccccc
Confidence 0 00000113455665555544 279999999999998765 222 234332
Q ss_pred ----cC-----cEEEeeEEEecCCcchHH
Q 030042 148 ----DG-----TIVKTKFLIGCDGIHSTV 167 (184)
Q Consensus 148 ----~g-----~~~~a~~vI~a~G~~s~~ 167 (184)
++ .++.||.||+|+|..|.+
T Consensus 165 ~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 165 QNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp TCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred cccCccccCceEEEECCEEEECCCCchHH
Confidence 22 579999999999976643
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.66 E-value=2.6e-16 Score=115.50 Aligned_cols=118 Identities=15% Similarity=0.217 Sum_probs=83.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+++||+|||||++|+++|+.|++.|++|+|||+.+.+++.. ... .+. ...
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~-------------------~~~----~~~--~~~----- 62 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL-------------------AAL----YPE--KHI----- 62 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH-------------------HHT----CTT--SEE-----
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc-------------------ccc----CCC--ccc-----
Confidence 36899999999999999999999999999999987654221 000 000 000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
+... ....+.+.++.+.+.+.+. +++++++++|+++...++ .. +.|.+.+|+++.+|+||+|+
T Consensus 63 -----~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~-~~v~~~~g~~~~~~~li~At 127 (360)
T 3ab1_A 63 -----YDVA-------GFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDD--GT-FETRTNTGNVYRSRAVLIAA 127 (360)
T ss_dssp -----CCST-------TCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTT--SC-EEEEETTSCEEEEEEEEECC
T ss_pred -----ccCC-------CCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC--ce-EEEEECCCcEEEeeEEEEcc
Confidence 0000 0112456677777666553 788999999999988651 23 88999888889999999999
Q ss_pred CcchH
Q 030042 162 GIHST 166 (184)
Q Consensus 162 G~~s~ 166 (184)
|..+.
T Consensus 128 G~~~~ 132 (360)
T 3ab1_A 128 GLGAF 132 (360)
T ss_dssp TTCSC
T ss_pred CCCcC
Confidence 98653
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.65 E-value=2.4e-15 Score=116.60 Aligned_cols=153 Identities=16% Similarity=0.156 Sum_probs=87.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc----ceeeecccHHHHHHHcCCh----------------
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG----AAISFAPNAWLALDALGVS---------------- 63 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---------------- 63 (184)
+++||+|||||++|+++|+.|+++|.+|+|+||.+..++.+ .++.... ....+.+++.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~--~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAW--TDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSS--CHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCC--CHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 36899999999999999999999999999999988765432 1111111 1111112211
Q ss_pred ------------------HHHHhcCCCccceEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeee
Q 030042 64 ------------------HKLASIYPPVNRISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIH 123 (184)
Q Consensus 64 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~ 123 (184)
+.+...+.++..+ .............. .........+.+.|.+.+. +++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--~~~~g~~~~r~~~~-------~~g~~~g~~l~~~L~~~~~~~gv~i~ 273 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTDV--GMMGGASVNRAHRP-------TGGAGVGAHVVQVLYDNAVKRNIDLR 273 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEE--ECCTTCSSCCEEES-------TTTCCHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCccC--cccCCcCCCeeEec-------CCCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 1111111111110 00000000000000 0001234567777766653 89999
Q ss_pred eCceEEEEeccCCCCCcceEEEEe--cCc--EEEeeEEEecCCcchHHHh
Q 030042 124 FSSKIAAIDSQTHDGSSPVFIHLV--DGT--IVKTKFLIGCDGIHSTVAW 169 (184)
Q Consensus 124 ~~~~v~~~~~~~~~~~~~~~v~~~--~g~--~~~a~~vI~a~G~~s~~~~ 169 (184)
++++|+++..+++ +.. +.|... +|+ ++.||.||+|||.++..++
T Consensus 274 ~~~~v~~l~~~~~-g~v-~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 274 MNTRGIEVLKDDK-GTV-KGILVKGMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp SSEEEEEEEECTT-SCE-EEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred eCCEeeEeEEcCC-CeE-EEEEEEeCCCcEEEEECCeEEEeCCCcccCHH
Confidence 9999999987541 232 334443 665 6899999999999885433
No 59
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.65 E-value=6.9e-16 Score=106.78 Aligned_cols=125 Identities=17% Similarity=0.134 Sum_probs=79.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
|+++||+|||||++|+.+|+.|++.|.+|+|+|+.....+. ...+.. ..+.....+
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~----~~~~~~----~~~~~~~~~---------------- 56 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMM----PFLPPK----PPFPPGSLL---------------- 56 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CSSCCC----SCCCTTCHH----------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCc----ccCccc----cccchhhHH----------------
Confidence 35799999999999999999999999999999997422111 011100 000000000
Q ss_pred CCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEe
Q 030042 83 TGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIG 159 (184)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~ 159 (184)
..+. + ..++ ++..+.+.+.+.+ ++++++ +++|+++...+ +.. +.|.+.+|+++.||+||+
T Consensus 57 ----~~~~--d--~~g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v-~~v~~~~g~~i~a~~VV~ 119 (232)
T 2cul_A 57 ----ERAY--D--PKDE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRV-VGVRTWEGPPARGEKVVL 119 (232)
T ss_dssp ----HHHC--C--TTCC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEE-EEEEETTSCCEECSEEEE
T ss_pred ----hhhc--c--CCCC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEE-EEEEECCCCEEECCEEEE
Confidence 0000 0 0111 4566666666655 267777 67999998765 232 567888888899999999
Q ss_pred cCCcchHHH
Q 030042 160 CDGIHSTVA 168 (184)
Q Consensus 160 a~G~~s~~~ 168 (184)
|+|.++..+
T Consensus 120 A~G~~s~~~ 128 (232)
T 2cul_A 120 AVGSFLGAR 128 (232)
T ss_dssp CCTTCSSCE
T ss_pred CCCCChhhc
Confidence 999976533
No 60
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.64 E-value=3.5e-15 Score=114.06 Aligned_cols=67 Identities=9% Similarity=0.101 Sum_probs=52.4
Q ss_pred eeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEEeeEEEecCCcchH-HHhh-hC
Q 030042 102 RFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVKTKFLIGCDGIHST-VAWW-LG 172 (184)
Q Consensus 102 ~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~a~~vI~a~G~~s~-~~~~-~~ 172 (184)
.++++..+...+.+.+. |++++.+++|+++...+ +. +.|.+. +|+ ++.||.||+|+|.++. +.+. ++
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~---~~-~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN---GL-WIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMH 219 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---TE-EEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTC
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC---CE-EEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhcc
Confidence 35678888888887764 89999999999998865 44 667764 565 7999999999999985 5554 44
No 61
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.64 E-value=2.6e-16 Score=121.20 Aligned_cols=136 Identities=18% Similarity=0.218 Sum_probs=86.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
+.++||+|||||++|+++|+.|++.|++|+|||+.+..++......++... +......
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~------~d~~~~~---------------- 64 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCR------LDTESYA---------------- 64 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCB------CSSCHHH----------------
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCcee------ecCchhh----------------
Confidence 346899999999999999999999999999999988776542100000000 0000000
Q ss_pred CCceeeeecCCC--CCCCCCCeeeeHHHHHHHHHhhCC--CC--eeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeE
Q 030042 83 TGATQETSLTGK--FGDGSGPRFIHRKKLLQTLADELP--NG--TIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKF 156 (184)
Q Consensus 83 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~ 156 (184)
..+.|... ..+..........++.+++.+.+. ++ +++++++|+++..+++ ...|.|.+.+|+++.||+
T Consensus 65 ----y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~~~w~V~~~~G~~~~ad~ 138 (545)
T 3uox_A 65 ----YGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN--DRLWEVTLDNEEVVTCRF 138 (545)
T ss_dssp ----HCHHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG--GTEEEEEETTTEEEEEEE
T ss_pred ----cccccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC--CCEEEEEECCCCEEEeCE
Confidence 00000000 001111223456667666665543 44 7899999999987652 223899999999999999
Q ss_pred EEecCCcchH
Q 030042 157 LIGCDGIHST 166 (184)
Q Consensus 157 vI~a~G~~s~ 166 (184)
||+|+|..+.
T Consensus 139 lV~AtG~~s~ 148 (545)
T 3uox_A 139 LISATGPLSA 148 (545)
T ss_dssp EEECCCSCBC
T ss_pred EEECcCCCCC
Confidence 9999997553
No 62
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.64 E-value=4.6e-16 Score=119.88 Aligned_cols=134 Identities=21% Similarity=0.279 Sum_probs=85.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.++||+|||||++|+++|+.|++.|++|+|||+.+..++......+. ++...+....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~yp----------g~~~dv~s~~------------- 76 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYP----------GARCDVESID------------- 76 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCT----------TCBCSSCTTT-------------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCC----------CceeCCCchh-------------
Confidence 45899999999999999999999999999999988766431100000 0000000000
Q ss_pred CceeeeecCCC--CCCCCCCeeeeHHHHHHHHHhhCC--CC--eeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEE
Q 030042 84 GATQETSLTGK--FGDGSGPRFIHRKKLLQTLADELP--NG--TIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFL 157 (184)
Q Consensus 84 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~--~~--~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~v 157 (184)
....|... ..+........+.++.+++.+.+. ++ +++++++|+++..+++ ...|.|.+.+|+++.||+|
T Consensus 77 ---y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~--~~~w~V~~~~G~~i~ad~l 151 (549)
T 4ap3_A 77 ---YSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE--GLRWTVRTDRGDEVSARFL 151 (549)
T ss_dssp ---SSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT--TTEEEEEETTCCEEEEEEE
T ss_pred ---cccccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC--CCEEEEEECCCCEEEeCEE
Confidence 00000000 000111123456677776665543 44 7899999999998763 2238999999999999999
Q ss_pred EecCCcch
Q 030042 158 IGCDGIHS 165 (184)
Q Consensus 158 I~a~G~~s 165 (184)
|+|+|..|
T Consensus 152 V~AtG~~s 159 (549)
T 4ap3_A 152 VVAAGPLS 159 (549)
T ss_dssp EECCCSEE
T ss_pred EECcCCCC
Confidence 99999754
No 63
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.63 E-value=1.9e-15 Score=114.38 Aligned_cols=55 Identities=13% Similarity=0.195 Sum_probs=45.2
Q ss_pred HHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH
Q 030042 108 KLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 108 ~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
.+.+.|.+.++.++|+++++|+++...+ ++ +.|.+.+|+++.||.||+|+..+..
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~---~~-~~v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSG---SC-YSLELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECS---SS-EEEEESSSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcC---Ce-EEEEECCCCEEECCEEEECCCHHHH
Confidence 5666777766446899999999999875 45 8899999988999999999987653
No 64
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.63 E-value=2.3e-15 Score=108.79 Aligned_cols=133 Identities=22% Similarity=0.313 Sum_probs=82.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccc-------eeeecccHHHHHHHcCChHHHHhcCCCcc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGA-------AISFAPNAWLALDALGVSHKLASIYPPVN 74 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (184)
.++||+|||||++|+++|+.|+++ |.+|+|+|+...+++... .....+....+++.+++. +.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~---------~~ 148 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVP---------YE 148 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCC---------CE
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCc---------cc
Confidence 368999999999999999999997 999999999876653211 112223344444444331 11
Q ss_pred ceEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCC---------------
Q 030042 75 RISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTH--------------- 136 (184)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~--------------- 136 (184)
. . +......+..++.+.|.+.+ ++++++++++++++...++
T Consensus 149 ~-------~--------------G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~ 207 (344)
T 3jsk_A 149 D-------E--------------GDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAED 207 (344)
T ss_dssp E-------C--------------SSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC---------------
T ss_pred c-------c--------------CCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccccc
Confidence 0 0 00000112345555555543 3889999999999876541
Q ss_pred CCC-cceEEEEe--------------cCcEEEeeEEEecCCcchH
Q 030042 137 DGS-SPVFIHLV--------------DGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 137 ~~~-~~~~v~~~--------------~g~~~~a~~vI~a~G~~s~ 166 (184)
.+. ....|.+. +..+++|++||+|||+.+.
T Consensus 208 ~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 208 EAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp -CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred CCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 010 11222221 2247999999999999876
No 65
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.63 E-value=7.6e-16 Score=118.73 Aligned_cols=137 Identities=22% Similarity=0.308 Sum_probs=84.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.++||+|||||++|+++|+.|++.|++|+|+|+.+..++......+. ++.-..... ..... . ..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~p----------g~~~d~~~~---~~~~~--f-~~ 78 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYP----------GARCDIESI---EYCYS--F-SE 78 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCT----------TCBCSSCTT---TSSCC--S-CH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCC----------ceeeccccc---ccccc--c-Ch
Confidence 35899999999999999999999999999999988776432100000 000000000 00000 0 00
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhh---CC-CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEe
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADE---LP-NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIG 159 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~-~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~ 159 (184)
.....+.+ ......+.++.+++.+. .. +.+++++++|+++..+++ ... |.|.+.+|+++.||+||+
T Consensus 79 ~~~~~~~~--------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~-w~V~~~~G~~~~ad~vV~ 148 (542)
T 1w4x_A 79 EVLQEWNW--------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEA-TNT-WTVDTNHGDRIRARYLIM 148 (542)
T ss_dssp HHHHHCCC--------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETT-TTE-EEEEETTCCEEEEEEEEE
T ss_pred hhhhccCc--------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC-CCe-EEEEECCCCEEEeCEEEE
Confidence 00000001 11134456666665543 32 467999999999988752 123 889999998999999999
Q ss_pred cCCcchH
Q 030042 160 CDGIHST 166 (184)
Q Consensus 160 a~G~~s~ 166 (184)
|+|.+|.
T Consensus 149 AtG~~s~ 155 (542)
T 1w4x_A 149 ASGQLSV 155 (542)
T ss_dssp CCCSCCC
T ss_pred CcCCCCC
Confidence 9998764
No 66
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.62 E-value=5.4e-15 Score=106.62 Aligned_cols=109 Identities=17% Similarity=0.219 Sum_probs=79.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
++||+|||||++|+++|+.|++.|.+|+|||+. .++.... .
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~------------------------------------~- 55 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE------------------------------------A- 55 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG------------------------------------C-
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc------------------------------------c-
Confidence 589999999999999999999999999999997 3322100 0
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCC
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G 162 (184)
.....+.. .......++.+++.+.+. ++++++ ++|+++...+ +. +.+.+.++.++.+|.||+|+|
T Consensus 56 -~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~~-~~v~~~~g~~~~~d~lvlAtG 122 (323)
T 3f8d_A 56 -GIVDDYLG-------LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRG---DE-FVVKTKRKGEFKADSVILGIG 122 (323)
T ss_dssp -CEECCSTT-------STTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC-----C-EEEEESSSCEEEEEEEEECCC
T ss_pred -ccccccCC-------CCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecC---CE-EEEEECCCCEEEcCEEEECcC
Confidence 00011111 112456677777666553 788888 8999998765 44 889999888999999999999
Q ss_pred cch
Q 030042 163 IHS 165 (184)
Q Consensus 163 ~~s 165 (184)
...
T Consensus 123 ~~~ 125 (323)
T 3f8d_A 123 VKR 125 (323)
T ss_dssp CEE
T ss_pred CCC
Confidence 874
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.62 E-value=2.6e-15 Score=108.76 Aligned_cols=115 Identities=21% Similarity=0.245 Sum_probs=83.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.++||+|||||++|+++|+.|++.|.+|+|+|+.+..++.. .. . .+ ....
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~-------------------~~---~-~~--~~~~----- 55 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL-------------------SA---L-YP--EKYI----- 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH-------------------HH---H-CT--TSEE-----
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee-------------------hh---c-CC--CceE-----
Confidence 35899999999999999999999999999999987754331 00 0 00 0000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
+.+. ......+.++.+++.+.+. +++++++++|+++...+ ... +.|.+.+|+ +.+|.||+|+
T Consensus 56 -----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~-~~v~~~~g~-~~~d~vVlAt 119 (332)
T 3lzw_A 56 -----YDVA-------GFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQA--DGV-FKLVTNEET-HYSKTVIITA 119 (332)
T ss_dssp -----CCST-------TCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECT--TSC-EEEEESSEE-EEEEEEEECC
T ss_pred -----eccC-------CCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECC--CCc-EEEEECCCE-EEeCEEEECC
Confidence 0011 1112456777777777664 78999999999998875 124 889998886 9999999999
Q ss_pred Ccc
Q 030042 162 GIH 164 (184)
Q Consensus 162 G~~ 164 (184)
|..
T Consensus 120 G~~ 122 (332)
T 3lzw_A 120 GNG 122 (332)
T ss_dssp TTS
T ss_pred CCC
Confidence 984
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.61 E-value=3e-15 Score=108.63 Aligned_cols=114 Identities=18% Similarity=0.207 Sum_probs=77.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc----CCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEE
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS----DGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISV 78 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
|.++||+|||||++|+++|+.|++.|++|+|+|+. ...++.- . ... .
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~-------------------~----~~~-----~- 56 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQL-------------------T----TTT-----D- 56 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG-------------------G----GCS-----E-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCcee-------------------e----ecc-----c-
Confidence 45689999999999999999999999999999982 2211110 0 000 0
Q ss_pred EecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeE
Q 030042 79 TNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKF 156 (184)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~ 156 (184)
...++ +. ...+.+.++.+.+.+.+. ++++++++ |+++...+ +. +.|.+ +++++.+|.
T Consensus 57 ---------~~~~~-----~~-~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~---~~-~~v~~-~~~~~~~~~ 115 (333)
T 1vdc_A 57 ---------VENFP-----GF-PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSS---KP-FKLFT-DSKAILADA 115 (333)
T ss_dssp ---------ECCST-----TC-TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSS---SS-EEEEC-SSEEEEEEE
T ss_pred ---------cccCC-----CC-ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC---CE-EEEEE-CCcEEEcCE
Confidence 00000 00 012455667766665553 78888886 88888764 34 77877 777899999
Q ss_pred EEecCCcchH
Q 030042 157 LIGCDGIHST 166 (184)
Q Consensus 157 vI~a~G~~s~ 166 (184)
||+|+|.++.
T Consensus 116 vv~A~G~~~~ 125 (333)
T 1vdc_A 116 VILAIGAVAK 125 (333)
T ss_dssp EEECCCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998764
No 69
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.61 E-value=1.4e-15 Score=117.96 Aligned_cols=149 Identities=23% Similarity=0.202 Sum_probs=88.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC-CCCCccceeeec----ccHHHHHHHcCC-hHHHHhcCCCccceE
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD-GLRGTGAAISFA----PNAWLALDALGV-SHKLASIYPPVNRIS 77 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~-~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 77 (184)
.++||+|||||++|+++|+.|++.|.+|+|+|+.. ..+..++..... ....+.+..++- ...+... ..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~----~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQ----AGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhh----cccc
Confidence 36899999999999999999999999999999974 333322221111 112222222221 1111110 1111
Q ss_pred EEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEe
Q 030042 78 VTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKT 154 (184)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a 154 (184)
+....... +...+. ....+++..+.+.+.+.+ .++++ ++++|+++...+ +.. +.|.+.+|.++.|
T Consensus 103 f~~l~~~k-------gpav~~-~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V-~GV~t~dG~~I~A 170 (651)
T 3ces_A 103 FRILNASK-------GPAVRA-TRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRV-VGAVTQMGLKFRA 170 (651)
T ss_dssp EEEESTTS-------CGGGCE-EEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBE-EEEEETTSEEEEE
T ss_pred hhhhhccc-------Cccccc-chhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEE-EEEEECCCCEEEC
Confidence 11111000 000000 112466666666666544 37788 678999998754 233 5788888888999
Q ss_pred eEEEecCCcchHHH
Q 030042 155 KFLIGCDGIHSTVA 168 (184)
Q Consensus 155 ~~vI~a~G~~s~~~ 168 (184)
|.||+|||.++..+
T Consensus 171 d~VVLATGt~s~~~ 184 (651)
T 3ces_A 171 KAVVLTVGTFLDGK 184 (651)
T ss_dssp EEEEECCSTTTCCE
T ss_pred CEEEEcCCCCccCc
Confidence 99999999987543
No 70
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.60 E-value=1.1e-14 Score=104.90 Aligned_cols=38 Identities=32% Similarity=0.565 Sum_probs=33.9
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|+..+|||+||||||+|+++|+.|++.|.+|+|||+..
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 88778999999999999999999999999999999853
No 71
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.60 E-value=1.3e-14 Score=103.60 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=77.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
++||+|||||++|+++|..|++.|.+|+|+|+.+..+... .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~--------------------------------------~- 42 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFA--------------------------------------S- 42 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGC--------------------------------------S-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccc--------------------------------------h-
Confidence 4899999999999999999999999999999864221100 0
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC---CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP---NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
....+. ........++.+.+.+.+. +++++ +++|+++...+ +. +.|.+.+++++.+|.||+|+
T Consensus 43 --~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~---~~-~~v~~~~g~~~~~d~vviAt 108 (297)
T 3fbs_A 43 --HSHGFL-------GQDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSF---GE-FIVEIDGGRRETAGRLILAM 108 (297)
T ss_dssp --CCCSST-------TCTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEET---TE-EEEEETTSCEEEEEEEEECC
T ss_pred --hhcCCc-------CCCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC---Ce-EEEEECCCCEEEcCEEEECC
Confidence 000000 0112345677777766654 34444 56999998875 44 88999999899999999999
Q ss_pred CcchH
Q 030042 162 GIHST 166 (184)
Q Consensus 162 G~~s~ 166 (184)
|..+.
T Consensus 109 G~~~~ 113 (297)
T 3fbs_A 109 GVTDE 113 (297)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 98654
No 72
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.60 E-value=1.6e-14 Score=110.68 Aligned_cols=40 Identities=45% Similarity=0.749 Sum_probs=36.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.++||+|||+|++|+++|+.|+++|.+|+|+||.+..++.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 4689999999999999999999999999999998877543
No 73
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=105.11 Aligned_cols=143 Identities=14% Similarity=0.131 Sum_probs=82.3
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCCeEEEeccCCCCCccceee---------------e--cccHHHHHHHcCChHH
Q 030042 6 KDVVIIGAGIAGLATALALKR---LGVEPLVLEKSDGLRGTGAAIS---------------F--APNAWLALDALGVSHK 65 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~---~g~~v~vie~~~~~~~~~~~~~---------------~--~~~~~~~~~~~~~~~~ 65 (184)
+||+|||||++|+++|+.|++ .|++|+|+||....++...... + .+.....+..+ ...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~--~~~ 79 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF--YDE 79 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH--HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH--HHH
Confidence 599999999999999999999 9999999999876654221110 0 11100011000 111
Q ss_pred HHhcCCCccceEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEE
Q 030042 66 LASIYPPVNRISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIH 145 (184)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~ 145 (184)
+........................+... . ....+.+.+.+.. +++|+++++|+++...+ ++ |.|.
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~-------g~~~l~~~l~~~~-g~~i~~~~~V~~i~~~~---~~-~~v~ 145 (342)
T 3qj4_A 80 LLAYGVLRPLSSPIEGMVMKEGDCNFVAP--Q-------GISSIIKHYLKES-GAEVYFRHRVTQINLRD---DK-WEVS 145 (342)
T ss_dssp HHHTTSCEECCSCEETCCC--CCEEEECT--T-------CTTHHHHHHHHHH-TCEEESSCCEEEEEECS---SS-EEEE
T ss_pred HHhCCCeecCchhhcceeccCCccceecC--C-------CHHHHHHHHHHhc-CCEEEeCCEEEEEEEcC---CE-EEEE
Confidence 11111100000000000000000000000 0 1245666666655 78999999999999865 45 8899
Q ss_pred EecCcEEEeeEEEecCCcc
Q 030042 146 LVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 146 ~~~g~~~~a~~vI~a~G~~ 164 (184)
+.+|+++.+|.||+|+...
T Consensus 146 ~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 146 KQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp ESSSCCEEESEEEECSCHH
T ss_pred ECCCCEEEcCEEEECCCHH
Confidence 9888778999999999754
No 74
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.59 E-value=4.5e-15 Score=114.97 Aligned_cols=68 Identities=12% Similarity=-0.014 Sum_probs=49.8
Q ss_pred eeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEEeeEEEecCCcch-HHHhhhCC
Q 030042 103 FIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVKTKFLIGCDGIHS-TVAWWLGL 173 (184)
Q Consensus 103 ~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~a~~vI~a~G~~s-~~~~~~~~ 173 (184)
.++...+...+.+.+. |++++.+++|+++...+ +.. +.|.+. +++ ++.||.||+|+|.++ .+.+..+.
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v-~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQI-VGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEE-EEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEE-EEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 4566777777766553 89999999999999875 232 455543 343 799999999999998 46666654
No 75
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.58 E-value=6e-15 Score=114.08 Aligned_cols=147 Identities=23% Similarity=0.211 Sum_probs=87.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC-CCCCccceeeec----ccHHHHHHHcC-ChHHHHhcCCCccceE
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD-GLRGTGAAISFA----PNAWLALDALG-VSHKLASIYPPVNRIS 77 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~-~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 77 (184)
.++||+|||||++|+.+|+.|++.|.+|+|+|+.. ..+..++..... ....+.++.++ .+..+... ..+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~----~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ----TGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhh----cccc
Confidence 35899999999999999999999999999999974 333322211111 11122222232 22221111 0111
Q ss_pred EEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEe
Q 030042 78 VTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKT 154 (184)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a 154 (184)
+....... +...+. .....++..+.+.+.+.+ +++++ ++++|+++...+ +.. +.|.+.+|..+.|
T Consensus 102 f~~l~~~k-------Gpav~~-~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V-~GV~t~dG~~i~A 169 (637)
T 2zxi_A 102 FKMLNTRK-------GKAVQS-PRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN--NQV-VGVRTNLGVEYKT 169 (637)
T ss_dssp EEEESTTS-------CGGGCE-EEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBE-EEEEETTSCEEEC
T ss_pred eeeccccc-------Cccccc-hhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEE-EEEEECCCcEEEe
Confidence 11111000 000000 112456677777666654 37788 578999998765 233 5688889989999
Q ss_pred eEEEecCCcchH
Q 030042 155 KFLIGCDGIHST 166 (184)
Q Consensus 155 ~~vI~a~G~~s~ 166 (184)
|.||+|||.++.
T Consensus 170 daVVLATG~~s~ 181 (637)
T 2zxi_A 170 KAVVVTTGTFLN 181 (637)
T ss_dssp SEEEECCTTCBT
T ss_pred CEEEEccCCCcc
Confidence 999999998754
No 76
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.58 E-value=2.3e-14 Score=103.09 Aligned_cols=119 Identities=24% Similarity=0.283 Sum_probs=74.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEe
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTN 80 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
|+ ..|||+||||||+|+++|+.|++.|++|+|||+....+....+. +. ....+
T Consensus 1 M~-~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~-~~-----------------------~~~~i-- 53 (314)
T 4a5l_A 1 MS-NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQ-LT-----------------------TTTII-- 53 (314)
T ss_dssp -C-CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCG-GG-----------------------GSSEE--
T ss_pred CC-CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCC-cC-----------------------ChHHh--
Confidence 76 46999999999999999999999999999999865321110000 00 00000
Q ss_pred cCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEE
Q 030042 81 LGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLI 158 (184)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI 158 (184)
..+. +. ...+...++.+.+.+... +..+.. ..+....... +. ..+.+.++.++.+|.||
T Consensus 54 --------~~~~-----g~-~~~i~~~~l~~~~~~~~~~~~~~~~~-~~v~~~~~~~---~~-~~~~~~~~~~~~~~~li 114 (314)
T 4a5l_A 54 --------ENFP-----GF-PNGIDGNELMMNMRTQSEKYGTTIIT-ETIDHVDFST---QP-FKLFTEEGKEVLTKSVI 114 (314)
T ss_dssp --------CCST-----TC-TTCEEHHHHHHHHHHHHHHTTCEEEC-CCEEEEECSS---SS-EEEEETTCCEEEEEEEE
T ss_pred --------hhcc-----CC-cccCCHHHHHHHHHHHHhhcCcEEEE-eEEEEeecCC---Cc-eEEEECCCeEEEEeEEE
Confidence 0011 11 112445666666555543 455544 4555555543 33 67778888899999999
Q ss_pred ecCCcch
Q 030042 159 GCDGIHS 165 (184)
Q Consensus 159 ~a~G~~s 165 (184)
+|||+..
T Consensus 115 iATG~~~ 121 (314)
T 4a5l_A 115 IATGATA 121 (314)
T ss_dssp ECCCEEE
T ss_pred Ecccccc
Confidence 9999754
No 77
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.58 E-value=6e-15 Score=114.33 Aligned_cols=147 Identities=17% Similarity=0.176 Sum_probs=86.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC-CCCCccceeeecc-cHHHHHHHc---C-ChHHHHhcCCCccceE
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD-GLRGTGAAISFAP-NAWLALDAL---G-VSHKLASIYPPVNRIS 77 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~-~~~~~~~~~~~~~-~~~~~~~~~---~-~~~~~~~~~~~~~~~~ 77 (184)
.+|||+|||||++|+.+|+.|++.|.+|+|+|+.. ..+..++...... ...+.++++ + +....... ..+.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~----~gi~ 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDA----TGIQ 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHH----HEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHh----cCCc
Confidence 46899999999999999999999999999999975 3333322221111 112222222 1 11111110 0111
Q ss_pred EEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEe
Q 030042 78 VTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKT 154 (184)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a 154 (184)
+....... +.. .......+++..+.+.+.+.+ ++++++ +.+|+++...+ ..+..|.+.+|+++.|
T Consensus 96 f~~l~~~k-------gpa-v~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~---g~V~GV~t~~G~~i~A 163 (641)
T 3cp8_A 96 FRMLNRSK-------GPA-MHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS---GKFSSVTVRSGRAIQA 163 (641)
T ss_dssp EEEECSSS-------CTT-TCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---TEEEEEEETTSCEEEE
T ss_pred hhhccccc-------Ccc-ccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC---CEEEEEEECCCcEEEe
Confidence 11100000 000 000113567777777666654 377874 56999988764 3314488888889999
Q ss_pred eEEEecCCcchH
Q 030042 155 KFLIGCDGIHST 166 (184)
Q Consensus 155 ~~vI~a~G~~s~ 166 (184)
|.||+|||.++.
T Consensus 164 d~VVLATG~~s~ 175 (641)
T 3cp8_A 164 KAAILACGTFLN 175 (641)
T ss_dssp EEEEECCTTCBT
T ss_pred CEEEECcCCCCC
Confidence 999999998764
No 78
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.57 E-value=4.4e-15 Score=109.15 Aligned_cols=134 Identities=19% Similarity=0.230 Sum_probs=80.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
|+++||+|||||++|+++|+.|++.|. +|+|||+.+ .++.... .+... ....+. .
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~---~~~~~-------------~~~~~~------~- 57 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH---WPKST-------------RTITPS------F- 57 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT---SCTTC-------------BCSSCC------C-
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc---Ccccc-------------cccCcc------h-
Confidence 346899999999999999999999999 999999986 4321000 00000 000000 0
Q ss_pred CCCceeeeecCCCCCCC-C----CCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEe
Q 030042 82 GTGATQETSLTGKFGDG-S----GPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKT 154 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~----~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a 154 (184)
.........+....... + ....+.+..+.+++.+.+. +++++++++|+++...+ +. +.|.+.++ ++.+
T Consensus 58 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~~-~~v~~~~g-~~~~ 132 (369)
T 3d1c_A 58 TSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD---AY-YTIATTTE-TYHA 132 (369)
T ss_dssp CCGGGTCCCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS---SS-EEEEESSC-CEEE
T ss_pred hcccCCchhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC---Ce-EEEEeCCC-EEEe
Confidence 00000000000000000 0 0113445566665554432 78999999999998765 34 88888877 5899
Q ss_pred eEEEecCCcch
Q 030042 155 KFLIGCDGIHS 165 (184)
Q Consensus 155 ~~vI~a~G~~s 165 (184)
|.||+|+|.++
T Consensus 133 d~vVlAtG~~~ 143 (369)
T 3d1c_A 133 DYIFVATGDYN 143 (369)
T ss_dssp EEEEECCCSTT
T ss_pred CEEEECCCCCC
Confidence 99999999875
No 79
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.57 E-value=4.3e-14 Score=101.64 Aligned_cols=111 Identities=22% Similarity=0.278 Sum_probs=77.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV-EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
+||+|||||++|+++|+.|++.|. +|+|+|+. ..++.... . ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~---~--------------------~~------------ 45 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG---S--------------------SE------------ 45 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG---C--------------------SC------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc---c--------------------cc------------
Confidence 799999999999999999999999 99999995 33222100 0 00
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCC
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G 162 (184)
...++ +. ...+++.++.+.+.+.+. ++++++ ++|+++...+ +. +.+.+.+|+++.+|.||+|+|
T Consensus 46 ---~~~~~-----~~-~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~---~~-~~v~~~~g~~~~~~~vv~AtG 111 (311)
T 2q0l_A 46 ---IENYP-----GV-KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD---SH-FVILAEDGKTFEAKSVIIATG 111 (311)
T ss_dssp ---BCCST-----TC-CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET---TE-EEEEETTSCEEEEEEEEECCC
T ss_pred ---cccCC-----CC-cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC---CE-EEEEEcCCCEEECCEEEECCC
Confidence 00000 00 012455666666665543 788877 7899998765 44 778788888999999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
.++.
T Consensus 112 ~~~~ 115 (311)
T 2q0l_A 112 GSPK 115 (311)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 8664
No 80
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.56 E-value=3.2e-14 Score=102.23 Aligned_cols=114 Identities=19% Similarity=0.258 Sum_probs=78.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
++||+|||||++|+++|+.|++.|.+|+|+|+. .++... . ....
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~-------------------~---------~~~~------ 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQIL-------------------D---------TVDI------ 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGG-------------------G---------CCEE------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceec-------------------c---------cccc------
Confidence 479999999999999999999999999999863 221100 0 0000
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCC
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G 162 (184)
..+. ......+..+.+.+.+.+. +++++++++|+++....+++.. +.|.+.+|+++.+|.||+|+|
T Consensus 45 ----~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~-~~v~~~~g~~~~~~~lv~AtG 112 (310)
T 1fl2_A 45 ----ENYI-------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGL-HQIETASGAVLKARSIIVATG 112 (310)
T ss_dssp ----CCBT-------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCC-EEEEETTSCEEEEEEEEECCC
T ss_pred ----cccc-------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCce-EEEEECCCCEEEeCEEEECcC
Confidence 0000 0112345566666655543 7899999999999765321224 888888888899999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
..+.
T Consensus 113 ~~~~ 116 (310)
T 1fl2_A 113 AKWR 116 (310)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8653
No 81
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.56 E-value=4.2e-14 Score=101.64 Aligned_cols=134 Identities=19% Similarity=0.286 Sum_probs=82.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccc-------eeeecccHHHHHHHcCChHHHHhcCCCccc
Q 030042 5 EKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGA-------AISFAPNAWLALDALGVSHKLASIYPPVNR 75 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (184)
++||+|||||++|+++|+.|++. |.+|+|+|+.+.+++... .....+....++..+++. +..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~---------~~~ 135 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP---------YED 135 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC---------CEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc---------ccc
Confidence 57999999999999999999998 999999999887653211 112223333344333221 100
Q ss_pred eEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC---CCCeeeeCceEEEEeccCCC--C--CcceEEEEe-
Q 030042 76 ISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL---PNGTIHFSSKIAAIDSQTHD--G--SSPVFIHLV- 147 (184)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~i~~~~~v~~~~~~~~~--~--~~~~~v~~~- 147 (184)
. +......+...+...|.+.+ ++++++.+++|+++..+++. + .. ..|.+.
T Consensus 136 -------~--------------g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV-~GVvv~~ 193 (326)
T 2gjc_A 136 -------E--------------GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV-AGVVTNW 193 (326)
T ss_dssp -------C--------------SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CE-EEEEEEE
T ss_pred -------C--------------CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEE-EEEEecc
Confidence 0 00011113345566665543 38899999999999876311 1 22 333321
Q ss_pred -------------cCcEEEe---------------eEEEecCCcchHHHh
Q 030042 148 -------------DGTIVKT---------------KFLIGCDGIHSTVAW 169 (184)
Q Consensus 148 -------------~g~~~~a---------------~~vI~a~G~~s~~~~ 169 (184)
++.++.| ++||+|||+.+++.+
T Consensus 194 ~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~ 243 (326)
T 2gjc_A 194 TLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGA 243 (326)
T ss_dssp HHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCS
T ss_pred eeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHH
Confidence 3357999 999999999876543
No 82
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.56 E-value=4.1e-14 Score=102.09 Aligned_cols=114 Identities=18% Similarity=0.270 Sum_probs=76.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEe
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTN 80 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
|.|+.+||+|||||++|+++|+.|++.|.+|+|+|+. .+++.. .+ .. ..
T Consensus 1 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~---~~--------------------~~---~~---- 49 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQL---TT--------------------TT---EV---- 49 (320)
T ss_dssp CCEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGG---GG--------------------CS---BC----
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceE---ec--------------------ch---hh----
Confidence 3456789999999999999999999999999999964 222210 00 00 00
Q ss_pred cCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEE
Q 030042 81 LGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLI 158 (184)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI 158 (184)
. .++ +. ...+.+..+.+++.+.+. ++++++++ ++++...+ +. +.+ +.++.++.+|+||
T Consensus 50 --~------~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~---~~-~~v-~~~~~~~~~~~lv 109 (320)
T 1trb_A 50 --E------NWP-----GD-PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQN---RP-FRL-NGDNGEYTCDALI 109 (320)
T ss_dssp --C------CST-----TC-CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSS---SS-EEE-EESSCEEEEEEEE
T ss_pred --h------hCC-----CC-CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecC---CE-EEE-EeCCCEEEcCEEE
Confidence 0 000 00 001334555555555442 78888885 88888754 33 677 6778889999999
Q ss_pred ecCCcch
Q 030042 159 GCDGIHS 165 (184)
Q Consensus 159 ~a~G~~s 165 (184)
+|+|..+
T Consensus 110 ~AtG~~~ 116 (320)
T 1trb_A 110 IATGASA 116 (320)
T ss_dssp ECCCEEE
T ss_pred ECCCCCc
Confidence 9999865
No 83
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.56 E-value=3.4e-14 Score=103.13 Aligned_cols=113 Identities=20% Similarity=0.299 Sum_probs=78.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC----CCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEE
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD----GLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVT 79 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
+++||+|||||++|+++|+.|++.|++|+|||+.+ .+++.. .. . .
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~-------------------~~-----~----~--- 69 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQL-------------------TT-----T----T--- 69 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG-------------------GG-----S----S---
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccc-------------------cc-----c----h---
Confidence 46899999999999999999999999999999965 222110 00 0 0
Q ss_pred ecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEE---ecCcEEEe
Q 030042 80 NLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHL---VDGTIVKT 154 (184)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~---~~g~~~~a 154 (184)
....++ +. ...+...++.+++.+.+. ++++++++ |+++...+ .. +.+.+ .++.++.+
T Consensus 70 -------~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~---~~-~~v~~~~~~~~~~~~~ 131 (338)
T 3itj_A 70 -------EIENFP-----GF-PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSS---KP-FKLWTEFNEDAEPVTT 131 (338)
T ss_dssp -------EECCST-----TC-TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS---SS-EEEEETTCSSSCCEEE
T ss_pred -------hhcccC-----CC-cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC---CE-EEEEEEecCCCcEEEe
Confidence 000010 00 113456677776666553 78999988 99998765 44 77777 36678999
Q ss_pred eEEEecCCcch
Q 030042 155 KFLIGCDGIHS 165 (184)
Q Consensus 155 ~~vI~a~G~~s 165 (184)
|.||+|+|..+
T Consensus 132 d~vvlAtG~~~ 142 (338)
T 3itj_A 132 DAIILATGASA 142 (338)
T ss_dssp EEEEECCCEEE
T ss_pred CEEEECcCCCc
Confidence 99999999864
No 84
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.54 E-value=1e-13 Score=100.28 Aligned_cols=113 Identities=23% Similarity=0.282 Sum_probs=76.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
++||+|||||++|+++|+.|++.|.+|+|+|+. .+++.... . .. +
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~---~--------------------~~---~-------- 52 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW---S--------------------EE---V-------- 52 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG---C--------------------SC---B--------
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc---c--------------------cc---c--------
Confidence 589999999999999999999999999999997 33322100 0 00 0
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEecc--CCCCCcceEEEEecCcEEEeeEEEec
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQ--THDGSSPVFIHLVDGTIVKTKFLIGC 160 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~--~~~~~~~~~v~~~~g~~~~a~~vI~a 160 (184)
..+. +.. ..+.+.++.+.+.+.+. ++++++ ++|+++... + ... +.|.+.+|+++.+|+||+|
T Consensus 53 ----~~~~-----~~~-~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~--~~~-~~v~~~~g~~~~~~~vv~A 118 (325)
T 2q7v_A 53 ----ENFP-----GFP-EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS--HPY-PFTVRGYNGEYRAKAVILA 118 (325)
T ss_dssp ----CCST-----TCS-SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS--SSC-CEEEEESSCEEEEEEEEEC
T ss_pred ----ccCC-----CCC-CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC--Cce-EEEEECCCCEEEeCEEEEC
Confidence 0000 000 01334566666555443 788877 689998876 3 122 6777788889999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|..+.
T Consensus 119 tG~~~~ 124 (325)
T 2q7v_A 119 TGADPR 124 (325)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 998653
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.54 E-value=1.2e-13 Score=104.56 Aligned_cols=149 Identities=17% Similarity=0.208 Sum_probs=81.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-----CCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEE-
Q 030042 5 EKDVVIIGAGIAGLATALALKRLG-----VEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISV- 78 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g-----~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (184)
.+||+|||||++|+++|..|++.| .+|+|||+.+..+.... ..+...... .....++.....+.....+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~-~~~~~~~~~----~~~~~~l~~~~~p~~~~~~~ 104 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGN-TLVSQSELQ----ISFLKDLVSLRNPTSPYSFV 104 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGG-GCCSSCBCS----SCTTSSSSTTTCTTCTTSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCC-CCCCCCcCC----cchhhccccccCCCCCCChh
Confidence 479999999999999999999999 99999999886642210 000000000 0000000000000000000
Q ss_pred --EecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCc-ceEEEEecCc---
Q 030042 79 --TNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSS-PVFIHLVDGT--- 150 (184)
Q Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~-~~~v~~~~g~--- 150 (184)
...... ...+.. .......+.++.+++...+. ++.++++++|++++..++.+.. .+.|.+.+|.
T Consensus 105 ~~l~~~~~---~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~ 176 (463)
T 3s5w_A 105 NYLHKHDR---LVDFIN-----LGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEE 176 (463)
T ss_dssp HHHHHTTC---HHHHHH-----HCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCE
T ss_pred HhhhhcCc---eeeccc-----ccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCce
Confidence 000000 000000 01123346667776665543 6789999999999876211122 1367777765
Q ss_pred -EEEeeEEEecCCcchH
Q 030042 151 -IVKTKFLIGCDGIHST 166 (184)
Q Consensus 151 -~~~a~~vI~a~G~~s~ 166 (184)
++.+|.||+|+|....
T Consensus 177 ~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 177 LVRTTRALVVSPGGTPR 193 (463)
T ss_dssp EEEEESEEEECCCCEEC
T ss_pred EEEEeCEEEECCCCCCC
Confidence 8999999999998543
No 86
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.54 E-value=8.1e-14 Score=100.58 Aligned_cols=110 Identities=26% Similarity=0.326 Sum_probs=73.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
++||+|||||++|+++|+.|++.|.+|+|+|+. ..++... .. ...
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~---~~--------------------~~~----------- 60 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTA---EA--------------------PLV----------- 60 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGG---GC--------------------SCB-----------
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCcccc---cc--------------------chh-----------
Confidence 589999999999999999999999999999994 3322110 00 000
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCC
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G 162 (184)
..++. . ..+...++.+.+.+.+. ++++++ .+|+++...+ +. +.|.+ ++.++.+|+||+|+|
T Consensus 61 ----~~~~~-----~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~~-~~v~~-~~~~~~~~~li~AtG 123 (319)
T 3cty_A 61 ----ENYLG-----F--KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQ---GG-FDIET-NDDTYHAKYVIITTG 123 (319)
T ss_dssp ----CCBTT-----B--SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEET---TE-EEEEE-SSSEEEEEEEEECCC
T ss_pred ----hhcCC-----C--cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeC---CE-EEEEE-CCCEEEeCEEEECCC
Confidence 00000 0 01234455555555442 677777 6899988764 33 66766 556899999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
..+.
T Consensus 124 ~~~~ 127 (319)
T 3cty_A 124 TTHK 127 (319)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 8653
No 87
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.53 E-value=4e-14 Score=107.22 Aligned_cols=146 Identities=16% Similarity=0.200 Sum_probs=84.3
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCC---eEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEE
Q 030042 6 KDVVIIGAGIAGLATALALKR---LGVE---PLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVT 79 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~---~g~~---v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
+||+|||||++|+++|..|++ .|.+ |+|||+.+..++...-..... . ...++. ........+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g--~---~~~g~~----~~~~~y~~l~~- 72 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTG--L---DENGEP----VHSSMYRYLWS- 72 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCS--B---CTTSSB----CCCCCCTTCBC-
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCC--c---cccCCC----CcCccccchhh-
Confidence 699999999999999999999 9999 999999877654321100000 0 000000 00000000000
Q ss_pred ecCCCceeeeecCCCCC---C-CCCCeeeeHHHHHHHHHhhCC--CCe--eeeCceEEEEeccCCCCCcceEEEEec---
Q 030042 80 NLGTGATQETSLTGKFG---D-GSGPRFIHRKKLLQTLADELP--NGT--IHFSSKIAAIDSQTHDGSSPVFIHLVD--- 148 (184)
Q Consensus 80 ~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~~l~~~~~--~~~--i~~~~~v~~~~~~~~~~~~~~~v~~~~--- 148 (184)
........+.+... . .......++..+.+++.+.+. +++ ++++++|+++...++ ... |.|.+.+
T Consensus 73 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~-~~~-~~V~~~~~~~ 147 (464)
T 2xve_A 73 ---NGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED-SQT-FTVTVQDHTT 147 (464)
T ss_dssp ---SSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT-TTE-EEEEEEETTT
T ss_pred ---cCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC-CCc-EEEEEEEcCC
Confidence 00000000111000 0 001224567788877777654 666 889999999988652 123 7787765
Q ss_pred C--cEEEeeEEEecCCcchH
Q 030042 149 G--TIVKTKFLIGCDGIHST 166 (184)
Q Consensus 149 g--~~~~a~~vI~a~G~~s~ 166 (184)
| .++.+|.||+|+|.++.
T Consensus 148 g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 148 DTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp TEEEEEEESEEEECCCSSSS
T ss_pred CceEEEEcCEEEECCCCCCC
Confidence 4 57899999999997654
No 88
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.53 E-value=8.8e-14 Score=107.84 Aligned_cols=154 Identities=20% Similarity=0.238 Sum_probs=85.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc----ceeee-----------cccHHHHHHHc---C-----
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG----AAISF-----------APNAWLALDAL---G----- 61 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~----~~~~~-----------~~~~~~~~~~~---~----- 61 (184)
.+||+|||+|++|+++|+.|++.|.+|+|+|+.+..++.. .+... ......+++.+ +
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5799999999999999999999999999999988765432 11110 01111111110 1
Q ss_pred -------------ChHHHHhcCCCccceEEEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCc
Q 030042 62 -------------VSHKLASIYPPVNRISVTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSS 126 (184)
Q Consensus 62 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~ 126 (184)
..+.+.....++..+. ............. .........+.+.|.+.+. ++++++++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~--~~gg~~~~r~~~~-------~~~~~~g~~l~~~L~~~~~~~gv~i~~~t 276 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVG--RMGGASVNRSHRP-------TGGAGVGAHVAQVLWDNAVKRGTDIRLNS 276 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEE--CCTTCSSCCEEES-------TTTCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCcccccc--ccCCCcCCeeEec-------CCCCCCHHHHHHHHHHHHHHcCCeEEecC
Confidence 0111122222221110 0000000000000 0001234566666666653 89999999
Q ss_pred eEEEEeccCCCCCcceEEEEe--cCc--EEEeeEEEecCCcchHHHh
Q 030042 127 KIAAIDSQTHDGSSPVFIHLV--DGT--IVKTKFLIGCDGIHSTVAW 169 (184)
Q Consensus 127 ~v~~~~~~~~~~~~~~~v~~~--~g~--~~~a~~vI~a~G~~s~~~~ 169 (184)
+|+++..+++ +.. +.|... +|+ ++.||.||+|+|.++..++
T Consensus 277 ~v~~l~~~~~-g~v-~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~ 321 (572)
T 1d4d_A 277 RVVRILEDAS-GKV-TGVLVKGEYTGYYVIKADAVVIAAGGFAKNNE 321 (572)
T ss_dssp EEEEEEEC---CCE-EEEEEEETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred EEEEEEECCC-CeE-EEEEEEeCCCcEEEEEcCEEEEeCCCCccCHH
Confidence 9999976531 232 334443 664 6899999999999885433
No 89
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.53 E-value=6.9e-14 Score=108.89 Aligned_cols=163 Identities=17% Similarity=0.133 Sum_probs=89.3
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCC--CCeEEEeccCCCCCcc----ceee--ecc-cHH-----HHHHHcC-C---
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLG--VEPLVLEKSDGLRGTG----AAIS--FAP-NAW-----LALDALG-V--- 62 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g--~~v~vie~~~~~~~~~----~~~~--~~~-~~~-----~~~~~~~-~--- 62 (184)
|...++||+|||||++|+++|+.|++.| .+|+|+||.....+.+ .++. +.+ ..+ ..+.... +
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~ 80 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQ 80 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCH
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCH
Confidence 5556799999999999999999999999 9999999976443211 1111 111 111 1111100 0
Q ss_pred -------------hHHHHhcCCCccceEEEecCCCceeeeecCCCCCCCC-CCeeeeHHHHHHHHHhhCC--C-CeeeeC
Q 030042 63 -------------SHKLASIYPPVNRISVTNLGTGATQETSLTGKFGDGS-GPRFIHRKKLLQTLADELP--N-GTIHFS 125 (184)
Q Consensus 63 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~-~~i~~~ 125 (184)
.+++...+.++.. ...+......+.+...... ...-.....+...|.+.+. + ++++++
T Consensus 81 ~~v~~~~~~~~~~i~~L~~~Gv~f~~-----~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~ 155 (602)
T 1kf6_A 81 DVVDYFVHHCPTEMTQLELWGCPWSR-----RPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDE 155 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCB-----CTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccc-----CCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeC
Confidence 0112222222211 0111000001111000000 0000113467777777653 5 899999
Q ss_pred ceEEEEeccCCCCCcceEEE---EecCc--EEEeeEEEecCCcchHHHhhh
Q 030042 126 SKIAAIDSQTHDGSSPVFIH---LVDGT--IVKTKFLIGCDGIHSTVAWWL 171 (184)
Q Consensus 126 ~~v~~~~~~~~~~~~~~~v~---~~~g~--~~~a~~vI~a~G~~s~~~~~~ 171 (184)
++|+++..++ +.. ..|. +.+|+ .+.|+.||+|||.++.+....
T Consensus 156 ~~v~~l~~~~--g~v-~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 156 HFVLDILVDD--GHV-RGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EEEEEEEEET--TEE-EEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred CEEEEEEEeC--CEE-EEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 9999998765 222 2332 25675 789999999999999875433
No 90
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.53 E-value=1.9e-13 Score=106.15 Aligned_cols=37 Identities=38% Similarity=0.420 Sum_probs=34.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
.++||+|||||++|+++|+.|++.|.+|+|+||.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3689999999999999999999999999999998654
No 91
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.51 E-value=1.3e-13 Score=105.76 Aligned_cols=115 Identities=21% Similarity=0.260 Sum_probs=79.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
..+||+|||||++|+++|+.|++.|++|+|+|+. .++... . . . .+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~------------~----------~-~---~~------- 255 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVL------------D----------T-V---DI------- 255 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGT------------T----------C-S---CB-------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCccc------------c----------c-c---cc-------
Confidence 4689999999999999999999999999999863 221100 0 0 0 00
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
..+. ........++.+.+.+.+. +++++.+++|+++....+.+.. +.|.+.+|+++.+|.||+|+
T Consensus 256 -----~~~~-------~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~-~~V~~~~g~~~~~d~vVlAt 322 (521)
T 1hyu_A 256 -----ENYI-------SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGL-HQIETASGAVLKARSIIIAT 322 (521)
T ss_dssp -----CCBT-------TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSC-EEEEETTSCEEEEEEEEECC
T ss_pred -----cccC-------CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCce-EEEEECCCCEEEcCEEEECC
Confidence 0000 0001334566666655543 7899999999999764311223 88888899899999999999
Q ss_pred CcchH
Q 030042 162 GIHST 166 (184)
Q Consensus 162 G~~s~ 166 (184)
|+.+.
T Consensus 323 G~~~~ 327 (521)
T 1hyu_A 323 GAKWR 327 (521)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98653
No 92
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.51 E-value=1.7e-13 Score=99.64 Aligned_cols=112 Identities=20% Similarity=0.306 Sum_probs=75.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+++||+|||||++|+++|+.|++.|.+|+|+|+. .+++.. .+. ..
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~---~~~--------------------~~----------- 57 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL---MTT--------------------TD----------- 57 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG---GSC--------------------SC-----------
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce---ecc--------------------ch-----------
Confidence 4689999999999999999999999999999975 222210 000 00
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEE-EEecCcEEEeeEEEec
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFI-HLVDGTIVKTKFLIGC 160 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v-~~~~g~~~~a~~vI~a 160 (184)
...++ +. ...+.+.++.+++.+.+. ++++++++ ++++.. + +. +.| .+.+++++.+|.||+|
T Consensus 58 ----~~~~~-----~~-~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~---~~-~~v~~~~~g~~~~~d~lviA 121 (335)
T 2a87_A 58 ----VENYP-----GF-RNGITGPELMDEMREQALRFGADLRMED-VESVSL-H---GP-LKSVVTADGQTHRARAVILA 121 (335)
T ss_dssp ----BCCST-----TC-TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-S---SS-SEEEEETTSCEEEEEEEEEC
T ss_pred ----hhhcC-----CC-CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-C---Cc-EEEEEeCCCCEEEeCEEEEC
Confidence 00000 00 001334556665555442 78888886 888887 3 23 667 7778888999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|..+.
T Consensus 122 tG~~~~ 127 (335)
T 2a87_A 122 MGAAAR 127 (335)
T ss_dssp CCEEEC
T ss_pred CCCCcc
Confidence 998653
No 93
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.50 E-value=3.9e-13 Score=102.67 Aligned_cols=62 Identities=16% Similarity=0.249 Sum_probs=41.2
Q ss_pred HHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchHHHhhhC
Q 030042 108 KLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHSTVAWWLG 172 (184)
Q Consensus 108 ~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~~~~~~~ 172 (184)
.+.+.|.+.++ |++|+++++|++|...+ +.. ..|.+.+|+++.||.||.+++.....++.++
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~-~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTG--NKI-EAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEE-EEEEETTSCEEECSCEEECCC----------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeC--CeE-EEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 34455555443 88999999999999876 233 6689999999999999999988766555543
No 94
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.49 E-value=3.2e-13 Score=105.25 Aligned_cols=156 Identities=21% Similarity=0.231 Sum_probs=86.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc----ceee--ec---ccHHH-H----HHHc-CC------
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG----AAIS--FA---PNAWL-A----LDAL-GV------ 62 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~----~~~~--~~---~~~~~-~----~~~~-~~------ 62 (184)
.++||+|||||++|+++|+.|++.|.+|+|+||....++.+ .++. +. ...++ . ++.- ++
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 35899999999999999999999999999999976543221 1111 11 11111 1 1110 01
Q ss_pred ----------hHHHHhcCCCccceEEEecCCCceeeeecCCCCCC-C---CCCee-----eeHHHHHHHHHhhCC--CCe
Q 030042 63 ----------SHKLASIYPPVNRISVTNLGTGATQETSLTGKFGD-G---SGPRF-----IHRKKLLQTLADELP--NGT 121 (184)
Q Consensus 63 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-----~~~~~l~~~l~~~~~--~~~ 121 (184)
.+++...+.++.. ...+......+...... + ..... .....+...|.+.+. +++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~-----~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~ 171 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSR-----TEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTS 171 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCB-----CTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHHHHHcCCCccc-----CCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCE
Confidence 1122222322211 11111111111111000 0 00000 123467777777654 899
Q ss_pred eeeCceEEEEeccCCCCCcceEEEE---ecCc--EEEeeEEEecCCcchHH
Q 030042 122 IHFSSKIAAIDSQTHDGSSPVFIHL---VDGT--IVKTKFLIGCDGIHSTV 167 (184)
Q Consensus 122 i~~~~~v~~~~~~~~~~~~~~~v~~---~~g~--~~~a~~vI~a~G~~s~~ 167 (184)
++.++.|+++..++ +.. ..|.. .+|+ .+.|+.||+|||+++.+
T Consensus 172 i~~~~~v~~Li~~~--g~v-~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 172 YFVEYFALDLLMEN--GEC-RGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEETEEEEEEEEET--TEE-EEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEceEEEEEEEEC--CEE-EEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 99999999998754 232 33433 4564 68999999999998864
No 95
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.49 E-value=1.4e-13 Score=105.92 Aligned_cols=37 Identities=41% Similarity=0.494 Sum_probs=34.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR 41 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~ 41 (184)
.++||+|||||++|+++|+.|++ |.+|+|+||.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 46899999999999999999999 99999999987654
No 96
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.48 E-value=8.7e-13 Score=103.51 Aligned_cols=40 Identities=33% Similarity=0.467 Sum_probs=36.3
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
|.+.++||+|||||++|+++|+.|++.|.+|+|+||....
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 6556799999999999999999999999999999997654
No 97
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.47 E-value=7.3e-13 Score=101.62 Aligned_cols=57 Identities=18% Similarity=0.330 Sum_probs=44.8
Q ss_pred HHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 106 RKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 106 ~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
...+.+.|.+.+++.+|+++++|++|...+ ++. +.|.+.+|+++.||.||.|.+...
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~--~~~-v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREP--SKN-VTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECT--TSC-EEEEETTSCEEEEEEEEECCCHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcC--CCe-EEEEECCCcEEECCEEEECCCHHH
Confidence 455666676666556799999999999763 244 889999998899999999997543
No 98
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.46 E-value=7.7e-13 Score=100.42 Aligned_cols=64 Identities=33% Similarity=0.430 Sum_probs=49.2
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCC--CCeEEEeccCCCCCccce---------------eeecccHHHHHHHcCChHH
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLG--VEPLVLEKSDGLRGTGAA---------------ISFAPNAWLALDALGVSHK 65 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g--~~v~vie~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 65 (184)
|.++||+|||||++|+++|+.|++.| .+|+|+|+.+..++...+ ....+...++++++|+...
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~ 81 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEK 81 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGG
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcce
Confidence 34689999999999999999999999 999999998776553211 1123456788888887755
Q ss_pred H
Q 030042 66 L 66 (184)
Q Consensus 66 ~ 66 (184)
+
T Consensus 82 ~ 82 (475)
T 3lov_A 82 L 82 (475)
T ss_dssp E
T ss_pred E
Confidence 4
No 99
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.45 E-value=1e-12 Score=98.32 Aligned_cols=39 Identities=36% Similarity=0.450 Sum_probs=35.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG 44 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~ 44 (184)
+||+|||||++|+++|+.|+++|.+|+|+|+.+.+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 489999999999999999999999999999998876554
No 100
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.45 E-value=1.7e-12 Score=98.56 Aligned_cols=63 Identities=29% Similarity=0.485 Sum_probs=48.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceee-------------e--cccHHHHHHHcCChHHH
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAIS-------------F--APNAWLALDALGVSHKL 66 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~ 66 (184)
..+||+|||||++|+++|+.|++.|.+|+|+|+.+..++...... . .+...++++++|+...+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCccee
Confidence 357999999999999999999999999999999988775433221 1 24567788888876443
No 101
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.45 E-value=3.4e-13 Score=102.25 Aligned_cols=42 Identities=36% Similarity=0.516 Sum_probs=36.8
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
|+ ++|||+|||||++|+++|..|++.|.+|+|||+.+..++.
T Consensus 1 M~-~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~ 42 (466)
T 3l8k_A 1 MS-LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGN 42 (466)
T ss_dssp -C-EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHH
T ss_pred CC-ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 65 3699999999999999999999999999999988776654
No 102
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.44 E-value=5.5e-12 Score=96.82 Aligned_cols=42 Identities=40% Similarity=0.654 Sum_probs=36.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
|+ .++||+|||||++||++|+.|++.|.+|+|+|+.+.+++.
T Consensus 1 m~-~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 1 MS-NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp ---CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CC-CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 55 4679999999999999999999999999999998887654
No 103
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.44 E-value=3.4e-12 Score=95.69 Aligned_cols=38 Identities=34% Similarity=0.613 Sum_probs=35.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
+||+|||||++|+++|+.|++.|.+|+|+|+++..++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 79999999999999999999999999999998776654
No 104
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.44 E-value=4.5e-13 Score=102.03 Aligned_cols=44 Identities=11% Similarity=0.211 Sum_probs=37.9
Q ss_pred CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH
Q 030042 119 NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 119 ~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
|++++.+++|+++...+ +. +.|.+.+|+++.+|.||.|+|..+.
T Consensus 246 Gv~i~~~~~V~~i~~~~---~~-v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTE---NC-YNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp TCEEESSCCEEEEEECS---SS-EEEEETTSCEEEESEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEEeeC---CE-EEEEECCCcEEEcCEEEEeeCCCcC
Confidence 89999999999998765 44 7888889989999999999998653
No 105
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.43 E-value=2.4e-14 Score=107.51 Aligned_cols=141 Identities=17% Similarity=0.131 Sum_probs=80.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC-cc---ceeeecccHHHHHHHcCC--hHHHHhcCCCccceE
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG-TG---AAISFAPNAWLALDALGV--SHKLASIYPPVNRIS 77 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~-~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 77 (184)
+++||+|||||++|+++|+.|++.|++|+|+|+.+.... .+ ........+...++.+|+ |.... .....+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~---~~~~~~~ 97 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEE---FGYFGHY 97 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHH---HCEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhc---cccccee
Confidence 347999999999999999999999999999999763211 11 112233445556666643 32211 1233333
Q ss_pred EEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCc-eEEEEeccCCCCCcceEEEEecCcEEEe
Q 030042 78 VTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSS-KIAAIDSQTHDGSSPVFIHLVDGTIVKT 154 (184)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~-~v~~~~~~~~~~~~~~~v~~~~g~~~~a 154 (184)
....... ...|... .......+++..+...|.+.+. ++++++.. .+.++... ...+
T Consensus 98 ~~~~~~~---~~~~~~~--~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~~~----------------~~~a 156 (430)
T 3ihm_A 98 YYVGGPQ---PMRFYGD--LKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLEGL----------------SEQY 156 (430)
T ss_dssp EEECSSS---CEEEEEE--EEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHHHH----------------HTTS
T ss_pred EEECCCC---ccccchh--cCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhhhh----------------cccC
Confidence 3332221 1111110 0112246677777777777763 67766522 11111110 1247
Q ss_pred eEEEecCCcchHHH
Q 030042 155 KFLIGCDGIHSTVA 168 (184)
Q Consensus 155 ~~vI~a~G~~s~~~ 168 (184)
|.||+|+|.+|.++
T Consensus 157 d~VV~AdG~~S~~~ 170 (430)
T 3ihm_A 157 DLLVVCTGKYALGK 170 (430)
T ss_dssp SEEEECCCCTTGGG
T ss_pred CEEEECCCCcchHH
Confidence 99999999998765
No 106
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.43 E-value=9.5e-13 Score=99.93 Aligned_cols=40 Identities=35% Similarity=0.562 Sum_probs=36.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccCCCCCcc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSDGLRGTG 44 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~~~~~~~ 44 (184)
++||+|||||++||++|+.|+++|. +|+|+|+.+..++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 3699999999999999999999999 999999988776543
No 107
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.42 E-value=2.8e-13 Score=102.64 Aligned_cols=143 Identities=16% Similarity=0.130 Sum_probs=76.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.++||+|||||++|+++|..|++.|.+|+|+|+. ..++........ ....++...++++.+...... ..+. . .
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~-psk~ll~~~~~~~~~~~~~~~-~g~~--~--~ 74 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCI-PSKALLRNAELVHIFTKDAKA-FGIS--G--E 74 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHH-HHHHHHHHHHHHHHHHHHTTT-TTEE--E--C
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCch-hhHHHHHHHHHHHHHHHHHHh-cCCC--C--C
Confidence 3689999999999999999999999999999997 333221111111 122233333333333211111 1111 0 0
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC--CCCeeeeCceEEEEeccCCCCCcceEEEEecC--cEEEeeEEEe
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL--PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG--TIVKTKFLIG 159 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g--~~~~a~~vI~ 159 (184)
...++.... .........+.+.+.+.+ .+++++.++.+. + +. .. +.|.+.+| +++.+|.||+
T Consensus 75 ---~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~---~~-v~V~~~~G~~~~~~~d~lVi 140 (464)
T 2a8x_A 75 ---VTFDYGIAY----DRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DA---NT-LLVDLNDGGTESVTFDNAII 140 (464)
T ss_dssp ---CEECHHHHH----HHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SS---SE-EEEEETTSCCEEEEEEEEEE
T ss_pred ---CccCHHHHH----HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC---Ce-EEEEeCCCceEEEEcCEEEE
Confidence 011110000 000000012222222222 278888887653 2 22 33 77888777 6899999999
Q ss_pred cCCcchHH
Q 030042 160 CDGIHSTV 167 (184)
Q Consensus 160 a~G~~s~~ 167 (184)
|||+.+..
T Consensus 141 AtG~~~~~ 148 (464)
T 2a8x_A 141 ATGSSTRL 148 (464)
T ss_dssp CCCEEECC
T ss_pred CCCCCCCC
Confidence 99987643
No 108
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.42 E-value=6.4e-13 Score=99.42 Aligned_cols=38 Identities=42% Similarity=0.567 Sum_probs=35.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG 44 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~ 44 (184)
||+|||||++|+++|+.|+++|.+|+|+|+.+.+++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCcee
Confidence 89999999999999999999999999999998876654
No 109
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.42 E-value=9.2e-13 Score=100.78 Aligned_cols=52 Identities=19% Similarity=0.315 Sum_probs=41.7
Q ss_pred HHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 107 KKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 107 ~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
..+.+.|.+.++ +++++++++|+++..++ ..+.+.+|+++.||.||.+.-..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~------~~v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANN------KTVTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTT------TEEEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccC------CEEEEcCCCEEECCEEEECCCHH
Confidence 457777877775 78999999999998765 34668899999999999877543
No 110
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.41 E-value=1.3e-12 Score=99.13 Aligned_cols=31 Identities=42% Similarity=0.707 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
||+|||||++|+++|+.|++.|.+|+|+||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 8999999999999999999999999999998
No 111
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.41 E-value=4.3e-13 Score=102.10 Aligned_cols=39 Identities=33% Similarity=0.563 Sum_probs=35.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
++||+|||||++|+++|+.|++.|.+|+|||+.+..++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~ 44 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGV 44 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCc
Confidence 689999999999999999999999999999997766543
No 112
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.40 E-value=4.6e-13 Score=101.05 Aligned_cols=106 Identities=24% Similarity=0.340 Sum_probs=69.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
+++||+|||||++|+++|+.|++. +.+|+|||+.+..+....+.. . ..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p---------------~--------------~~- 51 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIP---------------Y--------------VV- 51 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC----------------------------------------
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCc---------------c--------------cc-
Confidence 357999999999999999999988 789999999875422110000 0 00
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHH----HHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecC-cEEEeeE
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLL----QTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG-TIVKTKF 156 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g-~~~~a~~ 156 (184)
.. . .....+. +.+.+.. +++++++++|+++.... +.+.+.++ .++.+|.
T Consensus 52 -~~---~---------------~~~~~~~~~~~~~~~~~~-gi~v~~~~~v~~i~~~~------~~v~~~~g~~~~~~d~ 105 (449)
T 3kd9_A 52 -EG---L---------------STPDKLMYYPPEVFIKKR-GIDLHLNAEVIEVDTGY------VRVRENGGEKSYEWDY 105 (449)
T ss_dssp ---------------------------------CTHHHHT-TCEEETTCEEEEECSSE------EEEECSSSEEEEECSE
T ss_pred -CC---C---------------CCHHHhhhcCHHHHHHhc-CcEEEecCEEEEEecCC------CEEEECCceEEEEcCE
Confidence 00 0 0000111 1222222 78999999999987654 67777777 4899999
Q ss_pred EEecCCcch
Q 030042 157 LIGCDGIHS 165 (184)
Q Consensus 157 vI~a~G~~s 165 (184)
||+|||...
T Consensus 106 lviAtG~~p 114 (449)
T 3kd9_A 106 LVFANGASP 114 (449)
T ss_dssp EEECCCEEE
T ss_pred EEECCCCCC
Confidence 999999754
No 113
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.40 E-value=5e-13 Score=101.60 Aligned_cols=144 Identities=22% Similarity=0.236 Sum_probs=77.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.++||+|||||++|+++|+.|++.|.+|+|+|+.+..++........| +..++...+.++.+.... ...++... ..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p-sk~l~~~~~~~~~~~~~~-~~~gi~~~--~~ 79 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIP-SKALLNNSHLFHQMHTEA-QKRGIDVN--GD 79 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHH-HHHHHHHHHHHHHHHHTS-GGGTEEEC--SC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHH-HHHHHHHHHHHHHHHHHH-HhcCcccC--CC
Confidence 468999999999999999999999999999999766654321111111 222233222233332111 11122110 00
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC--CCCeeeeCceEEEEeccCCCCCcceEEEEecC--cE------EE
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL--PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG--TI------VK 153 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g--~~------~~ 153 (184)
...++.... .........+...+.+.+ .+++++.++.+.. +. .. +.|.+.+| ++ +.
T Consensus 80 ---~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~---~~-v~V~~~~G~~~~~~~~~~i~ 145 (478)
T 1v59_A 80 ---IKINVANFQ----KAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DE---TK-IRVTPVDGLEGTVKEDHILD 145 (478)
T ss_dssp ---EEECHHHHH----HHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SS---SE-EEEECCTTCTTCCSSCEEEE
T ss_pred ---CccCHHHHH----HHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cC---Ce-EEEEecCCCcccccccceEE
Confidence 001100000 000000011111122222 2789998887652 22 33 77877776 56 99
Q ss_pred eeEEEecCCcch
Q 030042 154 TKFLIGCDGIHS 165 (184)
Q Consensus 154 a~~vI~a~G~~s 165 (184)
+|.||+|||+.+
T Consensus 146 ~d~lViAtGs~p 157 (478)
T 1v59_A 146 VKNIIVATGSEV 157 (478)
T ss_dssp EEEEEECCCEEE
T ss_pred eCEEEECcCCCC
Confidence 999999999876
No 114
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.40 E-value=2.9e-12 Score=92.04 Aligned_cols=113 Identities=21% Similarity=0.231 Sum_probs=74.1
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEE-EeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLV-LEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~v-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
..++||+|||||++|+++|+.|++.|.+|+| +|+ +.+++..... .
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~-----------------------~---------- 47 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSS-----------------------S---------- 47 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGC-----------------------S----------
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeee-----------------------c----------
Confidence 4568999999999999999999999999999 999 4433221000 0
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEE-EEecCcEEEeeEEE
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFI-HLVDGTIVKTKFLI 158 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v-~~~~g~~~~a~~vI 158 (184)
....++. ........++..++.+.+. +++++++ +|+++ ..++ ... +.+ ...++ ++.+|.||
T Consensus 48 -----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~~-~~v~~~~~~-~~~~d~lv 111 (315)
T 3r9u_A 48 -----EIENYPG------VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DGS-FTIKLEGGK-TELAKAVI 111 (315)
T ss_dssp -----CBCCSTT------CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TSC-EEEEETTSC-EEEEEEEE
T ss_pred -----eeccCCC------CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CCc-EEEEEecCC-EEEeCEEE
Confidence 0000000 0012345677777776654 7888887 88888 4431 022 664 22333 89999999
Q ss_pred ecCCcch
Q 030042 159 GCDGIHS 165 (184)
Q Consensus 159 ~a~G~~s 165 (184)
+|+|...
T Consensus 112 lAtG~~~ 118 (315)
T 3r9u_A 112 VCTGSAP 118 (315)
T ss_dssp ECCCEEE
T ss_pred EeeCCCC
Confidence 9999743
No 115
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.40 E-value=1.1e-11 Score=94.53 Aligned_cols=58 Identities=26% Similarity=0.488 Sum_probs=45.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceee---------------ecccHHHHHHHcCCh
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAIS---------------FAPNAWLALDALGVS 63 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 63 (184)
+||+|||||++|+++|+.|++.|.+|+|+|+.+.+++...... ..+...+.++++|+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~ 112 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMH 112 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCc
Confidence 7999999999999999999999999999999988875432211 134566667777764
No 116
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.36 E-value=8.4e-13 Score=96.95 Aligned_cols=36 Identities=36% Similarity=0.599 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.++||+|||||++|+++|+.|+++|.+|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 468999999999999999999999999999999753
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.36 E-value=5.8e-13 Score=101.06 Aligned_cols=40 Identities=43% Similarity=0.645 Sum_probs=36.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.++||+|||||++|+++|..|++.|.+|+|+|+.+..++.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT 44 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc
Confidence 4689999999999999999999999999999998776654
No 118
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.36 E-value=2.8e-12 Score=95.85 Aligned_cols=110 Identities=25% Similarity=0.321 Sum_probs=72.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCC--eEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVE--PLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~--v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
+++||+|||||++|+++|..|+++|.+ |+|+|+.+...... ..+.....
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~-------------------~~l~~~~~---------- 58 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYER-------------------PPLSKEYL---------- 58 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCS-------------------GGGGTTTT----------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCc-------------------ccCCHHHH----------
Confidence 468999999999999999999999987 99999976431110 00000000
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
... .......... .+++.+. +++++.+++|+.+.... ..|.+.+|+.+.+|.+|+||
T Consensus 59 -~~~-----------~~~~~~~~~~---~~~~~~~--~i~~~~~~~v~~id~~~------~~v~~~~g~~~~~d~lvlAt 115 (415)
T 3lxd_A 59 -ARE-----------KTFERICIRP---AQFWEDK--AVEMKLGAEVVSLDPAA------HTVKLGDGSAIEYGKLIWAT 115 (415)
T ss_dssp -TTS-----------SCSGGGBSSC---HHHHHHT--TEEEEETCCEEEEETTT------TEEEETTSCEEEEEEEEECC
T ss_pred -cCC-----------CCHHHhccCC---HHHHHHC--CcEEEeCCEEEEEECCC------CEEEECCCCEEEeeEEEEcc
Confidence 000 0000000111 1222222 78999999999998765 56788888899999999999
Q ss_pred Ccch
Q 030042 162 GIHS 165 (184)
Q Consensus 162 G~~s 165 (184)
|...
T Consensus 116 G~~~ 119 (415)
T 3lxd_A 116 GGDP 119 (415)
T ss_dssp CEEC
T ss_pred CCcc
Confidence 9753
No 119
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.35 E-value=2.5e-12 Score=96.61 Aligned_cols=113 Identities=21% Similarity=0.309 Sum_probs=72.2
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEE
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISV 78 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
|+| .+||+|||||++|+++|..|++.|. +|+|+|+.+...... + .+.....
T Consensus 1 M~~-~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~------~-------------~l~~~~~------- 53 (431)
T 1q1r_A 1 MNA-NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL------P-------------PLSKAYL------- 53 (431)
T ss_dssp -CC-SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS------G-------------GGGTTTT-------
T ss_pred CCC-CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC------C-------------CCcHHHh-------
Confidence 553 5899999999999999999999998 799999875421000 0 0000000
Q ss_pred EecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEE
Q 030042 79 TNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLI 158 (184)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI 158 (184)
.... ........ +.+++.+. +++++++++|+.+...+ ..|.+.+|+++.+|.||
T Consensus 54 ---~~~~------------~~~~~~~~---~~~~~~~~--gv~~~~~~~v~~i~~~~------~~v~~~~g~~~~~d~lv 107 (431)
T 1q1r_A 54 ---AGKA------------TAESLYLR---TPDAYAAQ--NIQLLGGTQVTAINRDR------QQVILSDGRALDYDRLV 107 (431)
T ss_dssp ---TTCS------------CSGGGBSS---CHHHHHHT--TEEEECSCCEEEEETTT------TEEEETTSCEEECSEEE
T ss_pred ---CCCC------------ChHHhccc---CHHHHHhC--CCEEEeCCEEEEEECCC------CEEEECCCCEEECCEEE
Confidence 0000 00000000 11223332 78999999999998764 45677788889999999
Q ss_pred ecCCcchH
Q 030042 159 GCDGIHST 166 (184)
Q Consensus 159 ~a~G~~s~ 166 (184)
+|||..+.
T Consensus 108 iAtG~~p~ 115 (431)
T 1q1r_A 108 LATGGRPR 115 (431)
T ss_dssp ECCCEEEC
T ss_pred EcCCCCcc
Confidence 99998654
No 120
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.34 E-value=1.3e-12 Score=91.92 Aligned_cols=40 Identities=40% Similarity=0.562 Sum_probs=36.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG 44 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~ 44 (184)
++||+||||||+||++|+.|+++|++|+||||.+.+++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 4899999999999999999999999999999998876543
No 121
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.34 E-value=3.9e-12 Score=96.48 Aligned_cols=39 Identities=36% Similarity=0.613 Sum_probs=35.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
++||+|||||++|+++|+.|++.|.+|+|||+.+..++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 40 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGT 40 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCc
Confidence 589999999999999999999999999999998766544
No 122
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.33 E-value=3.3e-12 Score=100.24 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=33.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC------CCCeEEEeccCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL------GVEPLVLEKSDGL 40 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~------g~~v~vie~~~~~ 40 (184)
.++||+|||||++|+++|+.|++. |.+|+|+||....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 358999999999999999999997 9999999997643
No 123
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.32 E-value=1.6e-11 Score=96.41 Aligned_cols=36 Identities=31% Similarity=0.501 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHH---h-CCCCeEEEeccCCC
Q 030042 5 EKDVVIIGAGIAGLATALALK---R-LGVEPLVLEKSDGL 40 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~---~-~g~~v~vie~~~~~ 40 (184)
++||+|||||++|+++|+.|+ + .|.+|+|+||....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 589999999999999999999 6 89999999998743
No 124
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.32 E-value=3.3e-12 Score=97.02 Aligned_cols=40 Identities=35% Similarity=0.690 Sum_probs=36.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
+++||+|||||++|+++|..|++.|.+|+|||+.+..++.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGT 44 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCc
Confidence 4689999999999999999999999999999998766544
No 125
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.32 E-value=4.4e-12 Score=95.85 Aligned_cols=37 Identities=30% Similarity=0.591 Sum_probs=33.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR 41 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~ 41 (184)
.++||+|||||++|+++|..|++.|.+|+|+|+. ..+
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~g 38 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLG 38 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCC
Confidence 3689999999999999999999999999999997 443
No 126
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.31 E-value=5.4e-12 Score=95.38 Aligned_cols=39 Identities=38% Similarity=0.591 Sum_probs=35.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
++||+|||||++|+++|..|++.|.+|+|+|+.+..++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~ 39 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGT 39 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCc
Confidence 379999999999999999999999999999998766544
No 127
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.30 E-value=4.9e-13 Score=97.75 Aligned_cols=34 Identities=35% Similarity=0.450 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCC------CCeEEEeccCCC
Q 030042 7 DVVIIGAGIAGLATALALKRLG------VEPLVLEKSDGL 40 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g------~~v~vie~~~~~ 40 (184)
||+|||||++|+++|+.|+++| .+|+|+|+....
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 9999999999999999999998 899999997643
No 128
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.30 E-value=9.1e-13 Score=100.51 Aligned_cols=41 Identities=34% Similarity=0.596 Sum_probs=35.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
|+++||+|||||++|+++|+.|++.|.+|+|||+.+..++.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT 63 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 46799999999999999999999999999999998776654
No 129
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.29 E-value=2.5e-11 Score=92.49 Aligned_cols=40 Identities=35% Similarity=0.537 Sum_probs=36.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
+.+||+|||||++||++|+.|++.|.+|+|+|+.+.+++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 4689999999999999999999999999999999877654
No 130
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.29 E-value=7.9e-12 Score=94.89 Aligned_cols=36 Identities=31% Similarity=0.424 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGL 40 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~ 40 (184)
+.||+|||||++|+++|+.|++. |.+|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999998 8999999998764
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.28 E-value=1.1e-11 Score=94.10 Aligned_cols=40 Identities=30% Similarity=0.469 Sum_probs=35.3
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
|+ .++||+|||||++|+++|+.|++.|.+|+|||+. ..++
T Consensus 1 M~-~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG 40 (467)
T 1zk7_A 1 ME-PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGG 40 (467)
T ss_dssp CC-CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTH
T ss_pred CC-CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCc
Confidence 54 4689999999999999999999999999999987 4443
No 132
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.28 E-value=4.6e-11 Score=88.45 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=72.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+..+|+|||||++|+++|..|...+.+|+|||+.+..... ...+ +.+.......
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~-------~~~l---------~~~l~g~~~~---------- 61 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY-------RPRL---------NEIIAKNKSI---------- 61 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC-------GGGH---------HHHHHSCCCG----------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc-------cChh---------hHHHcCCCCH----------
Confidence 4679999999999999999998788999999997754211 0000 0000000000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
. .. ... ..+++.+. +++++++++|+++...+ ..|.+.+|+++.+|.||+|||+
T Consensus 62 ---~------------~l-~~~---~~~~~~~~--~i~~~~~~~V~~id~~~------~~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 62 ---D------------DI-LIK---KNDWYEKN--NIKVITSEFATSIDPNN------KLVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp ---G------------GT-BSS---CHHHHHHT--TCEEECSCCEEEEETTT------TEEEETTSCEEECSEEEECCCE
T ss_pred ---H------------Hc-cCC---CHHHHHHC--CCEEEeCCEEEEEECCC------CEEEECCCCEEECCEEEEecCC
Confidence 0 00 000 11222222 88999999999998775 4578888989999999999997
Q ss_pred ch
Q 030042 164 HS 165 (184)
Q Consensus 164 ~s 165 (184)
..
T Consensus 115 ~p 116 (385)
T 3klj_A 115 IA 116 (385)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 133
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.27 E-value=3.1e-11 Score=90.07 Aligned_cols=107 Identities=18% Similarity=0.198 Sum_probs=70.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
+++||+|||||++|+++|..|++.|. +|+|+|+.+...... .+....++... . ...+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~-----~~~~~~~~~~~----------~-~~~~----- 64 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDR-----PPLSKDFMAHG----------D-AEKI----- 64 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCS-----GGGGTHHHHHC----------C-GGGS-----
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccC-----CCCCHHHhCCC----------c-hhhh-----
Confidence 35899999999999999999999988 499999976432110 00000111000 0 0000
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
.+. .+ +. .+++++.+++|+++.... ..|.+.+|+++.+|.||+||
T Consensus 65 ---------------------~~~------~~-~~-~~v~~~~~~~v~~i~~~~------~~v~~~~g~~~~~d~lviAt 109 (408)
T 2gqw_A 65 ---------------------RLD------CK-RA-PEVEWLLGVTAQSFDPQA------HTVALSDGRTLPYGTLVLAT 109 (408)
T ss_dssp ---------------------BCC------CT-TS-CSCEEEETCCEEEEETTT------TEEEETTSCEEECSEEEECC
T ss_pred ---------------------hHH------HH-HH-CCCEEEcCCEEEEEECCC------CEEEECCCCEEECCEEEECC
Confidence 000 01 11 178899999999998764 56777888899999999999
Q ss_pred CcchH
Q 030042 162 GIHST 166 (184)
Q Consensus 162 G~~s~ 166 (184)
|....
T Consensus 110 G~~~~ 114 (408)
T 2gqw_A 110 GAAPR 114 (408)
T ss_dssp CEEEC
T ss_pred CCCCC
Confidence 98653
No 134
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.27 E-value=1.3e-12 Score=99.74 Aligned_cols=64 Identities=8% Similarity=0.039 Sum_probs=45.9
Q ss_pred eeeHHHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCC----cceEEEEecC-----cEEEeeEEEecCCcchH
Q 030042 103 FIHRKKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGS----SPVFIHLVDG-----TIVKTKFLIGCDGIHST 166 (184)
Q Consensus 103 ~~~~~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~----~~~~v~~~~g-----~~~~a~~vI~a~G~~s~ 166 (184)
...+.++.++|...+. +..|+|+++|+++.+.+.++. ..|.|.+.++ +++.|+.||+|+|....
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAK 215 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCC
Confidence 4567777777766554 456999999999987653211 1388888764 36889999999996443
No 135
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.27 E-value=1.5e-11 Score=92.87 Aligned_cols=110 Identities=20% Similarity=0.268 Sum_probs=68.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.||+|||||++|+++|..|++. |.+|+|||+.+..+....+... + . .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~-------~----------------------~--~ 51 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSA-------Y----------------------F--N 51 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchh-------h----------------------h--c
Confidence 5999999999999999999998 8899999998765422111000 0 0 0
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEE-EecCcEEEeeEEEecCC
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIH-LVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~-~~~g~~~~a~~vI~a~G 162 (184)
..... .. ........ .+.+. +++++++++|+++...+ .. +.+. ..+++++.+|.+|+|||
T Consensus 52 ~~~~~--~~-------~~~~~~~~----~~~~~--gi~~~~~~~V~~id~~~---~~-v~v~~~~~~~~~~~d~lviAtG 112 (452)
T 3oc4_A 52 HTINE--LH-------EARYITEE----ELRRQ--KIQLLLNREVVAMDVEN---QL-IAWTRKEEQQWYSYDKLILATG 112 (452)
T ss_dssp ------------------CCCCHH----HHHHT--TEEEECSCEEEEEETTT---TE-EEEEETTEEEEEECSEEEECCC
T ss_pred CCCCC--HH-------HhhcCCHH----HHHHC--CCEEEECCEEEEEECCC---CE-EEEEecCceEEEEcCEEEECCC
Confidence 00000 00 00000112 22222 78888999999998875 33 5554 22456899999999999
Q ss_pred cch
Q 030042 163 IHS 165 (184)
Q Consensus 163 ~~s 165 (184)
...
T Consensus 113 ~~p 115 (452)
T 3oc4_A 113 ASQ 115 (452)
T ss_dssp CCB
T ss_pred ccc
Confidence 854
No 136
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.27 E-value=5.5e-11 Score=89.42 Aligned_cols=111 Identities=23% Similarity=0.323 Sum_probs=71.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHh---CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceE
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKR---LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRIS 77 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (184)
|+. +.||+|||||++|+++|..|++ .|.+|+|||+.+... +.+. . ..+.........+
T Consensus 1 M~~-m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~-~---------~~~~~g~~~~~~~- 61 (437)
T 3sx6_A 1 MRG-SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPS-N---------PWVGVGWKERDDI- 61 (437)
T ss_dssp CTT-SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGG-H---------HHHHHTSSCHHHH-
T ss_pred CCC-CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCC-c---------cccccCccCHHHH-
Confidence 553 4799999999999999999999 799999999976321 1110 0 0000000000000
Q ss_pred EEecCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEE
Q 030042 78 VTNLGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFL 157 (184)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~v 157 (184)
... +.+.+.+. +++++ ..+|+++...+ ..|.+.+|+++.+|+|
T Consensus 62 -------------------------~~~---l~~~~~~~--gv~~~-~~~v~~id~~~------~~V~~~~g~~i~~d~l 104 (437)
T 3sx6_A 62 -------------------------AFP---IRHYVERK--GIHFI-AQSAEQIDAEA------QNITLADGNTVHYDYL 104 (437)
T ss_dssp -------------------------EEE---CHHHHHTT--TCEEE-CSCEEEEETTT------TEEEETTSCEEECSEE
T ss_pred -------------------------HHH---HHHHHHHC--CCEEE-EeEEEEEEcCC------CEEEECCCCEEECCEE
Confidence 000 11222222 77776 46899998765 4577888888999999
Q ss_pred EecCCcchHH
Q 030042 158 IGCDGIHSTV 167 (184)
Q Consensus 158 I~a~G~~s~~ 167 (184)
|+|+|..+..
T Consensus 105 viAtG~~~~~ 114 (437)
T 3sx6_A 105 MIATGPKLAF 114 (437)
T ss_dssp EECCCCEECG
T ss_pred EECCCCCcCc
Confidence 9999986644
No 137
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.26 E-value=5.6e-12 Score=96.77 Aligned_cols=35 Identities=34% Similarity=0.536 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|||+|||||++|+++|..|++.|.+|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 36899999999999999999999999999999864
No 138
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.26 E-value=1.5e-11 Score=93.88 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=75.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
++||+|||||++|+++|+.|++. .+|+|||+.+..++.... ...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~----------------------~~~------------- 151 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL----------------------KGI------------- 151 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG----------------------TCS-------------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec----------------------ccc-------------
Confidence 57999999999999999999999 999999998765433100 000
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC-CCeeeeCceEEEEeccCCCCCcceEEEE-ecCc--EEEeeEEEec
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELP-NGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDGT--IVKTKFLIGC 160 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g~--~~~a~~vI~a 160 (184)
. + .+.. . ...++...+.+.+. +++++++++|.++...+ .. +.+.. .+++ .+.+|.+|+|
T Consensus 152 --~---~-----~g~~--~-~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~---~~-~~~~~~~~~~~~~~~~d~lvlA 214 (493)
T 1y56_A 152 --K---Q-----EGFN--K-DSRKVVEELVGKLNENTKIYLETSALGVFDKG---EY-FLVPVVRGDKLIEILAKRVVLA 214 (493)
T ss_dssp --E---E-----TTTT--E-EHHHHHHHHHHTCCTTEEEETTEEECCCEECS---SS-EEEEEEETTEEEEEEESCEEEC
T ss_pred --c---c-----CCCC--C-CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCC---cE-EEEEEecCCeEEEEECCEEEEC
Confidence 0 0 0000 0 34556666655543 78889999999988765 33 44443 4453 6899999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|+...
T Consensus 215 tGa~~~ 220 (493)
T 1y56_A 215 TGAIDS 220 (493)
T ss_dssp CCEEEC
T ss_pred CCCCcc
Confidence 998643
No 139
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.25 E-value=1.7e-11 Score=97.78 Aligned_cols=38 Identities=50% Similarity=0.751 Sum_probs=35.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
.+||+|||||++|+++|+.|++.|.+|+|+|+.+..++
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999999999999999877665
No 140
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.25 E-value=9.4e-12 Score=95.10 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhC---CCCeEEEeccCCCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRL---GVEPLVLEKSDGLRG 42 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~---g~~v~vie~~~~~~~ 42 (184)
++||+|||||++|+++|+.|++. |.+|+|||+.+ .++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG 41 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGG 41 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCC
Confidence 48999999999999999999999 99999999987 544
No 141
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.25 E-value=1.5e-11 Score=93.14 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=34.8
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
|++.++||+|||||++|+++|+.|++.|.+|+|||+ ...++
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG 41 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGG 41 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTH
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCC
Confidence 665679999999999999999999999999999999 44443
No 142
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.25 E-value=8.4e-13 Score=100.70 Aligned_cols=41 Identities=29% Similarity=0.434 Sum_probs=35.2
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
|+..+|||+|||||++|+++|..|++.|.+|+|||++. .++
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG 44 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGT 44 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSC
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCC
Confidence 44345899999999999999999999999999999964 443
No 143
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.25 E-value=8.2e-11 Score=87.81 Aligned_cols=107 Identities=22% Similarity=0.272 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCC--eEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVE--PLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~--v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.+|+|||||++|+++|..|++.|.+ |+|||+.+...... .+ +...+......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~-----~~----------l~~~~~~g~~~----------- 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDR-----PS----------LSKAVLDGSLE----------- 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCS-----GG----------GGTHHHHTSSS-----------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCC-----cc----------ccHHHhCCCCC-----------
Confidence 4999999999999999999999987 99999976532110 00 00000000000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
...+ ... .+++.+. +++++.+++|+.+.... ..|.+.+|+++.+|.||+|||.
T Consensus 57 --~~~~--------------~~~---~~~~~~~--~i~~~~~~~v~~id~~~------~~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 57 --RPPI--------------LAE---ADWYGEA--RIDMLTGPEVTALDVQT------RTISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp --SCCB--------------SSC---TTHHHHT--TCEEEESCCEEEEETTT------TEEEETTSCEEECSEEEECCCE
T ss_pred --HHHh--------------cCC---HHHHHHC--CCEEEeCCEEEEEECCC------CEEEECCCCEEECCEEEEccCC
Confidence 0000 000 1112222 78999999999998765 5678888889999999999997
Q ss_pred ch
Q 030042 164 HS 165 (184)
Q Consensus 164 ~s 165 (184)
..
T Consensus 110 ~p 111 (410)
T 3ef6_A 110 RA 111 (410)
T ss_dssp EE
T ss_pred cc
Confidence 63
No 144
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.22 E-value=1.4e-11 Score=91.90 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKR---LGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~---~g~~v~vie~~~ 38 (184)
.||+|||||++|+++|..|++ .|.+|+|||+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 489999999999999999999 899999999976
No 145
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.22 E-value=3.6e-11 Score=91.68 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=70.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC---CCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEe
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLG---VEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTN 80 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g---~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
+++||+|||||++|+++|..|++.| .+|+|||+.+..+..+.+ ... .+.....
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-------~~~--------~~~~~~~--------- 89 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-------MAL--------WIGEQIA--------- 89 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-------HHH--------HHTTSSS---------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-------cch--------hhcCccC---------
Confidence 3589999999999999999999987 899999998754322111 000 0000000
Q ss_pred cCCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEE-EecCcEEEeeEEEe
Q 030042 81 LGTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIH-LVDGTIVKTKFLIG 159 (184)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~-~~~g~~~~a~~vI~ 159 (184)
. .... ..... +.+.+. +++++++++|+.+...+ .. +.+. ..+++++.+|.||+
T Consensus 90 --~--~~~~------------~~~~~----~~~~~~--gv~v~~~~~v~~i~~~~---~~-v~v~~~g~~~~~~~d~lvi 143 (490)
T 2bc0_A 90 --G--PEGL------------FYSDK----EELESL--GAKVYMESPVQSIDYDA---KT-VTALVDGKNHVETYDKLIF 143 (490)
T ss_dssp --C--SGGG------------BSCCH----HHHHHT--TCEEETTCCEEEEETTT---TE-EEEEETTEEEEEECSEEEE
T ss_pred --C--HHHh------------hhcCH----HHHHhC--CCEEEeCCEEEEEECCC---CE-EEEEeCCcEEEEECCEEEE
Confidence 0 0000 00001 122222 78898999999998765 33 5554 21235799999999
Q ss_pred cCCcchH
Q 030042 160 CDGIHST 166 (184)
Q Consensus 160 a~G~~s~ 166 (184)
|||....
T Consensus 144 AtG~~p~ 150 (490)
T 2bc0_A 144 ATGSQPI 150 (490)
T ss_dssp CCCEEEC
T ss_pred CCCCCcC
Confidence 9997653
No 146
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.21 E-value=4.8e-11 Score=90.70 Aligned_cols=38 Identities=34% Similarity=0.586 Sum_probs=34.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR 41 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~ 41 (184)
++|||+|||||++|+++|+.|++.|.+|+|||+.+.++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~g 39 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKE 39 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccC
Confidence 47999999999999999999999999999999987543
No 147
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.21 E-value=1.1e-10 Score=85.96 Aligned_cols=105 Identities=18% Similarity=0.144 Sum_probs=68.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.|++|||||++|+++|..|++.| +|+|+|+.+.... ....+ ........
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~-------~~~~l---------~~~~~g~~-------------- 57 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYY-------SKPML---------SHYIAGFI-------------- 57 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCC-------CSTTH---------HHHHTTSS--------------
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcc-------ccchh---------HHHHhCCC--------------
Confidence 59999999999999999999999 9999999765321 00000 00000000
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
.+... ... ..+++.+. +++++.+++|+.+.... +.|. .+|+++.+|.||+|||+..
T Consensus 58 ----~~~~~--------~~~---~~~~~~~~--~v~~~~g~~v~~id~~~------~~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 58 ----PRNRL--------FPY---SLDWYRKR--GIEIRLAEEAKLIDRGR------KVVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp ----CGGGG--------CSS---CHHHHHHH--TEEEECSCCEEEEETTT------TEEE-ESSCEEECSEEEECCCEEE
T ss_pred ----CHHHh--------ccC---CHHHHHhC--CcEEEECCEEEEEECCC------CEEE-ECCcEEECCEEEECCCCCC
Confidence 00000 000 11222232 78999999999988764 4555 6778899999999999754
No 148
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.21 E-value=1.2e-10 Score=87.93 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=37.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG 44 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~ 44 (184)
+++||+|||+|++|+++|+.|++.|.+|+++|+++..++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 46899999999999999999999999999999998776543
No 149
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.21 E-value=6.4e-11 Score=90.08 Aligned_cols=35 Identities=29% Similarity=0.479 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+++||+|||||++|+++|+.|++.|.+|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999973
No 150
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.21 E-value=2.1e-10 Score=89.33 Aligned_cols=113 Identities=15% Similarity=0.227 Sum_probs=71.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
.+.||+|||||++|+++|+.|++. |.+|+|||+.+..+.. +...... +.....
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~-------~~~lp~~--------~~g~~~---------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA-------NCGLPYY--------IGGVIT---------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC-------GGGHHHH--------HTTSSC----------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcccc-------CCCCchh--------hcCcCC----------
Confidence 457999999999999999999998 8899999998765311 1001000 000000
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE-ecCc--EEEeeEEE
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDGT--IVKTKFLI 158 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g~--~~~a~~vI 158 (184)
. .. .... ...+.+.+.. +++++++++|+++...+ .. +.+.. .+|+ .+.+|.||
T Consensus 90 -~---~~-----------~~~~----~~~~~~~~~~-gi~v~~~~~V~~id~~~---~~-v~v~~~~~g~~~~~~~d~lv 145 (588)
T 3ics_A 90 -E---RQ-----------KLLV----QTVERMSKRF-NLDIRVLSEVVKINKEE---KT-ITIKNVTTNETYNEAYDVLI 145 (588)
T ss_dssp -C---GG-----------GGBS----SCHHHHHHHT-TCEEECSEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEE
T ss_pred -C---hH-----------Hhhc----cCHHHHHHhc-CcEEEECCEEEEEECCC---CE-EEEeecCCCCEEEEeCCEEE
Confidence 0 00 0000 0112222222 78899999999998765 33 55554 3455 78899999
Q ss_pred ecCCcch
Q 030042 159 GCDGIHS 165 (184)
Q Consensus 159 ~a~G~~s 165 (184)
+|||...
T Consensus 146 iAtG~~p 152 (588)
T 3ics_A 146 LSPGAKP 152 (588)
T ss_dssp ECCCEEE
T ss_pred ECCCCCC
Confidence 9999754
No 151
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.20 E-value=3.1e-11 Score=91.47 Aligned_cols=36 Identities=31% Similarity=0.590 Sum_probs=33.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|+++||+|||||++|+++|..|++.|.+|+|||+.+
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 336999999999999999999999999999999976
No 152
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.20 E-value=1.2e-10 Score=88.59 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=70.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 5 EKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
++||+|||||++|+++|..|++. |.+|+|||+.+..+....+ ...+ + ....
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-------~~~~--------~-~~~~----------- 88 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-------LPYV--------I-SGAI----------- 88 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-------HHHH--------H-TTSS-----------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-------cchh--------h-cCCc-----------
Confidence 36999999999999999999986 8899999997754322111 1000 0 0000
Q ss_pred CCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE-ecCc--EEEeeEEEe
Q 030042 83 TGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDGT--IVKTKFLIG 159 (184)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g~--~~~a~~vI~ 159 (184)
. .+. ..... ..+.+.+.. +++++++++|+++...+ .. +.+.. .+|+ ++.+|.||+
T Consensus 89 ----~--~~~-------~l~~~----~~~~~~~~~-gv~~~~~~~v~~i~~~~---~~-v~v~~~~~g~~~~~~~d~lvi 146 (480)
T 3cgb_A 89 ----A--STE-------KLIAR----NVKTFRDKY-GIDAKVRHEVTKVDTEK---KI-VYAEHTKTKDVFEFSYDRLLI 146 (480)
T ss_dssp ----S--CGG-------GGBSS----CHHHHHHTT-CCEEESSEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEEE
T ss_pred ----C--CHH-------Hhhhc----CHHHHHhhc-CCEEEeCCEEEEEECCC---CE-EEEEEcCCCceEEEEcCEEEE
Confidence 0 000 00000 112232322 78899999999998765 33 55655 4565 799999999
Q ss_pred cCCcchH
Q 030042 160 CDGIHST 166 (184)
Q Consensus 160 a~G~~s~ 166 (184)
|||....
T Consensus 147 AtG~~p~ 153 (480)
T 3cgb_A 147 ATGVRPV 153 (480)
T ss_dssp CCCEEEC
T ss_pred CCCCccc
Confidence 9997653
No 153
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.18 E-value=3.8e-11 Score=88.83 Aligned_cols=37 Identities=32% Similarity=0.505 Sum_probs=30.8
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
|+ .++||+|||||++|+++|..|++.|. +|+++|+..
T Consensus 1 M~-~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 1 MS-ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp ----CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CC-CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 55 36899999999999999999999984 689999864
No 154
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.17 E-value=1.9e-10 Score=85.68 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=69.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV--EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.||+|||||++|+++|..|++.|. +|+|||+.+....... + +...+.. ..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~l~-------------~~ 53 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP-----P----------LSKAYLK-------------SG 53 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG-----G----------GGTGGGG-------------SC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc-----c----------CCHHHHC-------------CC
Confidence 589999999999999999999998 8999999764311100 0 0000000 00
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
......... ...++.+. +++++. ++|+++.... ..+.+.+|+++.+|.||+|||.
T Consensus 54 -------------~~~~~~~~~---~~~~~~~~--~i~~~~-~~v~~id~~~------~~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 54 -------------GDPNSLMFR---PEKFFQDQ--AIELIS-DRMVSIDREG------RKLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp -------------CCTTSSBSS---CHHHHHHT--TEEEEC-CCEEEEETTT------TEEEESSSCEEECSEEEECCCE
T ss_pred -------------CCHHHccCC---CHHHHHhC--CCEEEE-EEEEEEECCC------CEEEECCCCEEECCEEEEeeCC
Confidence 000000011 11222222 788888 8999998765 4577888889999999999997
Q ss_pred ch
Q 030042 164 HS 165 (184)
Q Consensus 164 ~s 165 (184)
..
T Consensus 109 ~p 110 (404)
T 3fg2_P 109 RN 110 (404)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 155
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.17 E-value=1.7e-11 Score=93.45 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=32.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
++|||+|||||++|+++|..|++.|.+|+|||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 4699999999999999999999999999999983
No 156
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.17 E-value=5.9e-11 Score=89.09 Aligned_cols=104 Identities=26% Similarity=0.354 Sum_probs=66.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLG--VEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.+|+|||||++|+++|..|++.+ .+|+|||+.+... +.|.. ..+.........+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l----------~~v~~g~~~~~~i~------ 59 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAF----------PHLAMGWRKFEDIS------ 59 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGH----------HHHHHTCSCGGGSE------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccH----------HHHhcCCCCHHHhh------
Confidence 37999999999999999999865 6899999876421 11111 11111111111110
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
.+. .. .+.+. +++++.+ +|++++..+ -+|.+++|+++.+|++|+|+|+
T Consensus 60 -----~~~---------------~~---~~~~~--gv~~i~~-~v~~Id~~~------~~V~~~~g~~i~YD~LViAtG~ 107 (430)
T 3hyw_A 60 -----VPL---------------AP---LLPKF--NIEFINE-KAESIDPDA------NTVTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp -----EES---------------TT---TGGGG--TEEEECS-CEEEEETTT------TEEEETTCCEEECSEEEECCCC
T ss_pred -----hcH---------------HH---HHHHC--CcEEEEe-EEEEEECCC------CEEEECCCCEEECCEEEEeCCC
Confidence 000 00 11111 6777654 799998775 5688899999999999999997
Q ss_pred c
Q 030042 164 H 164 (184)
Q Consensus 164 ~ 164 (184)
.
T Consensus 108 ~ 108 (430)
T 3hyw_A 108 K 108 (430)
T ss_dssp E
T ss_pred C
Confidence 5
No 157
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.16 E-value=1.4e-10 Score=88.12 Aligned_cols=34 Identities=35% Similarity=0.539 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
.++||+|||||++|+++|+.|++.|.+|+|||+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4689999999999999999999999999999976
No 158
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.16 E-value=7.9e-11 Score=88.41 Aligned_cols=105 Identities=25% Similarity=0.322 Sum_probs=67.6
Q ss_pred ccEEEECCCHHHHHHHHHHHh--CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKR--LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~--~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.||+|||||++|+++|+.|++ .|.+|+|||+.+..+.. +. .. .+.........+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~-------~~-~~---------~~~~g~~~~~~~~------ 59 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PA-FP---------HLAMGWRKFEDIS------ 59 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GG-HH---------HHHHTCSCGGGSE------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC-------CC-cc---------hhccCccCHHHHH------
Confidence 699999999999999999999 78999999998653211 10 10 0000000000000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
.... +.+.+. +++++. .+|+.+...+ ..|.+.+++++.+|.||+|+|.
T Consensus 60 -----~~~~------------------~~~~~~--gv~~~~-~~v~~id~~~------~~v~~~~g~~i~~d~liiAtG~ 107 (430)
T 3h28_A 60 -----VPLA------------------PLLPKF--NIEFIN-EKAESIDPDA------NTVTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp -----EEST------------------TTGGGG--TEEEEC-SCEEEEETTT------TEEEETTCCEEECSEEEECCCC
T ss_pred -----HHHH------------------HHHHhc--CCEEEE-EEEEEEECCC------CEEEECCCcEEECCEEEEcCCc
Confidence 0000 011111 677775 4888888765 4577788888999999999998
Q ss_pred ch
Q 030042 164 HS 165 (184)
Q Consensus 164 ~s 165 (184)
..
T Consensus 108 ~~ 109 (430)
T 3h28_A 108 KL 109 (430)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 159
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.16 E-value=1.4e-11 Score=93.96 Aligned_cols=132 Identities=13% Similarity=0.169 Sum_probs=72.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
.++||+|||||++|+++|..|++. +.+|+|||+.+....... +-+..++. +..... .....+..+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~-----~lsk~l~~--~~~~~~------~~~~~~~~~ 76 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP-----PLSKELWF--SDDPNV------TKTLRFKQW 76 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG-----GGGTGGGC--C--CTH------HHHCEEECT
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC-----CCCHHhhc--CCccch------hhccccccc
Confidence 468999999999999999999877 789999999865321100 00000000 000000 000111111
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhC-CCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEec
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADEL-PNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGC 160 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a 160 (184)
.... ..+.+... . +......+ .+.. .+++++.+++|+++...+ ..|.+.+|+++.+|.||+|
T Consensus 77 ~~~~-~~~~~~~~-----~-~~~~~~~l----~~~~~~gv~~~~g~~v~~id~~~------~~V~~~~g~~i~yd~lviA 139 (493)
T 1m6i_A 77 NGKE-RSIYFQPP-----S-FYVSAQDL----PHIENGGVAVLTGKKVVQLDVRD------NMVKLNDGSQITYEKCLIA 139 (493)
T ss_dssp TSCE-EESBSSCG-----G-GSBCTTTT----TTSTTCEEEEEETCCEEEEEGGG------TEEEETTSCEEEEEEEEEC
T ss_pred cccc-ccccccch-----H-hhcchhhh----hhhhcCCeEEEcCCEEEEEECCC------CEEEECCCCEEECCEEEEC
Confidence 1000 00001000 0 00011111 1111 278899999999998765 5577788889999999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
||+..
T Consensus 140 TGs~p 144 (493)
T 1m6i_A 140 TGGTP 144 (493)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99754
No 160
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.15 E-value=1.4e-10 Score=89.90 Aligned_cols=111 Identities=18% Similarity=0.216 Sum_probs=69.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.||+|||||++|+++|+.|++. +.+|+|||+.+..+.. +.....+ +......
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~-------~~~l~~~--------~~~~~~~----------- 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA-------NCGLPYH--------ISGEIAQ----------- 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC-------GGGHHHH--------HTSSSCC-----------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc-------ccCchHH--------hcCCcCC-----------
Confidence 4899999999999999999988 7899999998765311 1011000 0000000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE-ecC--cEEEeeEEEec
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDG--TIVKTKFLIGC 160 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g--~~~~a~~vI~a 160 (184)
......-....+ .+.. +++++++++|+++...+ .. +.+.. .+| .++.+|.||+|
T Consensus 56 --------------~~~~~~~~~~~~----~~~~-~i~~~~~~~V~~id~~~---~~-v~~~~~~~g~~~~~~~d~lviA 112 (565)
T 3ntd_A 56 --------------RSALVLQTPESF----KARF-NVEVRVKHEVVAIDRAA---KL-VTVRRLLDGSEYQESYDTLLLS 112 (565)
T ss_dssp --------------GGGGBCCCHHHH----HHHH-CCEEETTEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEEEC
T ss_pred --------------hHHhhccCHHHH----HHhc-CcEEEECCEEEEEECCC---CE-EEEEecCCCCeEEEECCEEEEC
Confidence 000000011222 2221 78899999999998765 33 55554 234 37899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
||...
T Consensus 113 tG~~p 117 (565)
T 3ntd_A 113 PGAAP 117 (565)
T ss_dssp CCEEE
T ss_pred CCCCC
Confidence 99854
No 161
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.15 E-value=3e-10 Score=87.30 Aligned_cols=40 Identities=30% Similarity=0.459 Sum_probs=35.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.++||+|||||++|+++|+.|++.|.+|+|||+.+..++.
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~ 81 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGS 81 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 4689999999999999999999999999999998765544
No 162
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.15 E-value=2.4e-11 Score=91.75 Aligned_cols=113 Identities=14% Similarity=0.180 Sum_probs=69.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+||+|||||++|+++|..|++. |.+|+|+|+.+..+..+. ....+ + .. ....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~--------~-~g--~~~~-------- 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-------GIALY--------L-GK--EIKN-------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-------GHHHH--------H-TT--CBGG--------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-------cchhh--------h-cC--Cccc--------
Confidence 5899999999999999999998 999999999875432211 01000 0 00 0000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe-c--CcEEEeeEEEec
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV-D--GTIVKTKFLIGC 160 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~-~--g~~~~a~~vI~a 160 (184)
..+.. . ... +.+.+.+. +++++++++++.+...+ .. +.+... + ++++.+|.+|+|
T Consensus 55 -----~~~~~-------~-~~~---~~~~~~~~--gv~~~~~~~v~~i~~~~---~~-v~v~~~~~g~~~~~~~d~lviA 112 (452)
T 2cdu_A 55 -----NDPRG-------L-FYS---SPEELSNL--GANVQMRHQVTNVDPET---KT-IKVKDLITNEEKTEAYDKLIMT 112 (452)
T ss_dssp -----GCGGG-------G-BSC---CHHHHHHT--TCEEEESEEEEEEEGGG---TE-EEEEETTTCCEEEEECSEEEEC
T ss_pred -----CCHHH-------h-hhc---CHHHHHHc--CCEEEeCCEEEEEEcCC---CE-EEEEecCCCceEEEECCEEEEc
Confidence 00000 0 000 11222222 78899999999998764 33 555441 2 457999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
||....
T Consensus 113 tGs~p~ 118 (452)
T 2cdu_A 113 TGSKPT 118 (452)
T ss_dssp CCEEEC
T ss_pred cCCCcC
Confidence 997654
No 163
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.14 E-value=2.5e-10 Score=86.08 Aligned_cols=111 Identities=19% Similarity=0.207 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
+||+|||||++|+++|..|++. |.+|+|||+.+..+..++ ..... +..... .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~--------~~~~~~-----------~ 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-------GMQLY--------LEGKVK-----------D 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-------GHHHH--------HTTSSC-----------C
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-------cchhh--------hcCccC-----------C
Confidence 3899999999999999999997 899999999875432211 01000 000000 0
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE-ecCc--EEEeeEEEec
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDGT--IVKTKFLIGC 160 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g~--~~~a~~vI~a 160 (184)
... .... +.+.+.+. +++++.+++++++...+ .. +.+.. .+|+ ++.+|.||+|
T Consensus 55 --~~~------------~~~~----~~~~~~~~--gv~~~~~~~v~~i~~~~---~~-v~~~~~~~g~~~~~~~d~lviA 110 (447)
T 1nhp_A 55 --VNS------------VRYM----TGEKMESR--GVNVFSNTEITAIQPKE---HQ-VTVKDLVSGEERVENYDKLIIS 110 (447)
T ss_dssp --GGG------------SBSC----CHHHHHHT--TCEEEETEEEEEEETTT---TE-EEEEETTTCCEEEEECSEEEEC
T ss_pred --HHH------------hhcC----CHHHHHHC--CCEEEECCEEEEEeCCC---CE-EEEEecCCCceEEEeCCEEEEc
Confidence 000 0000 11223332 78899999999998765 33 55554 3454 4899999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
||....
T Consensus 111 tG~~p~ 116 (447)
T 1nhp_A 111 PGAVPF 116 (447)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 997643
No 164
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.14 E-value=1.6e-10 Score=87.52 Aligned_cols=39 Identities=31% Similarity=0.445 Sum_probs=34.3
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR 41 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~ 41 (184)
|+ +++||+|||||++|+++|..|++.|.+|+|||+. ..+
T Consensus 1 M~-~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~G 39 (463)
T 2r9z_A 1 MT-QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALG 39 (463)
T ss_dssp -C-CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT
T ss_pred CC-ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCC
Confidence 64 4699999999999999999999999999999997 443
No 165
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.13 E-value=4.1e-10 Score=85.89 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=30.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-CCCCeEEEe
Q 030042 4 VEKDVVIIGAGIAGLATALALKR-LGVEPLVLE 35 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie 35 (184)
.++||+|||||++|+++|+.|++ .|.+|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 46899999999999999999999 999999999
No 166
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.13 E-value=5.8e-10 Score=82.49 Aligned_cols=108 Identities=20% Similarity=0.312 Sum_probs=79.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
..+++|||+|++|+.+|..|++.|.+|+++|+.+.+...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 357999999999999999999999999999987643110
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
+ . . .--...+.+.+.+. +++++.+++|+++...+ +. +.+.+.+|+++.+|.||.|+|..
T Consensus 184 ------~-----~--~--~~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 184 ------L-----L--H--PAAAKAVQAGLEGL--GVRFHLGPVLASLKKAG---EG-LEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp ------T-----S--C--HHHHHHHHHHHHTT--TCEEEESCCEEEEEEET---TE-EEEEETTSCEEEESEEEECSCEE
T ss_pred ------c-----c--C--HHHHHHHHHHHHHc--CCEEEeCCEEEEEEecC---CE-EEEEECCCCEEECCEEEECcCCC
Confidence 0 0 0 00012333444433 89999999999998764 44 77888889899999999999986
Q ss_pred hH--HHhhhCCC
Q 030042 165 ST--VAWWLGLS 174 (184)
Q Consensus 165 s~--~~~~~~~~ 174 (184)
+. +.+.+++.
T Consensus 243 p~~~l~~~~g~~ 254 (384)
T 2v3a_A 243 PRTELAFAAGLA 254 (384)
T ss_dssp ECCHHHHHTTCC
T ss_pred cCHHHHHHCCCC
Confidence 63 45555554
No 167
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.10 E-value=8.3e-10 Score=82.05 Aligned_cols=105 Identities=15% Similarity=0.196 Sum_probs=67.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLG--VEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGT 83 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
.+|+|||||++|+++|..|++.+ .+|+|||+++..... + .+..+.........+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p----------~~~~v~~g~~~~~~~------- 58 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-------Y----------MSNEVIGGDRELASL------- 58 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-------T----------THHHHHHTSSCGGGG-------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-------c----------CHHHHhcCCCCHHHH-------
Confidence 47999999999999999998875 589999987642211 1 111111111100000
Q ss_pred CceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 84 GATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
......+ .+. +++++. .+|+++...+ ..+.+.+|+++.+|++|+|+|.
T Consensus 59 -------------------~~~~~~~----~~~--gv~~i~-~~v~~id~~~------~~v~~~~g~~i~yd~LviAtG~ 106 (401)
T 3vrd_B 59 -------------------RVGYDGL----RAH--GIQVVH-DSALGIDPDK------KLVKTAGGAEFAYDRCVVAPGI 106 (401)
T ss_dssp -------------------EECSHHH----HHT--TCEEEC-SCEEEEETTT------TEEEETTSCEEECSEEEECCCE
T ss_pred -------------------hhCHHHH----HHC--CCEEEE-eEEEEEEccC------cEEEecccceeecceeeeccCC
Confidence 1111222 222 677765 4788988765 5578889999999999999997
Q ss_pred chH
Q 030042 164 HST 166 (184)
Q Consensus 164 ~s~ 166 (184)
...
T Consensus 107 ~~~ 109 (401)
T 3vrd_B 107 DLL 109 (401)
T ss_dssp EEC
T ss_pred ccc
Confidence 643
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.09 E-value=1.1e-09 Score=82.71 Aligned_cols=98 Identities=20% Similarity=0.357 Sum_probs=74.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+.+|..|++.|.+|+++|+.+..... .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-----~------------------------------------ 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-----M------------------------------------ 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----S------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-----c------------------------------------
Confidence 47999999999999999999999999999987543110 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
. .--...+.+.+.+. +++++.+++|+++...+ +. +.+.+.+|+++.+|.||.|+|..+
T Consensus 207 --------------~--~~~~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~---~~-v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 207 --------------D--LEVSRAAERVFKKQ--GLTIRTGVRVTAVVPEA---KG-ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp --------------C--HHHHHHHHHHHHHH--TCEEECSCCEEEEEEET---TE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred --------------C--HHHHHHHHHHHHHC--CCEEEECCEEEEEEEeC---CE-EEEEECCCeEEEcCEEEECcCCCc
Confidence 0 00012334444444 89999999999998765 44 777777888999999999999876
Q ss_pred H
Q 030042 166 T 166 (184)
Q Consensus 166 ~ 166 (184)
.
T Consensus 265 ~ 265 (455)
T 2yqu_A 265 Y 265 (455)
T ss_dssp C
T ss_pred C
Confidence 4
No 169
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.08 E-value=1.4e-09 Score=82.15 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=32.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
|+ +++||+|||||++|+++|+.|++.|.+|+|||+.
T Consensus 1 M~-~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 1 MT-KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CC-ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 54 4689999999999999999999999999999997
No 170
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.07 E-value=2.9e-10 Score=86.83 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCCeEEEec
Q 030042 5 EKDVVIIGAGIAGLATALALKR-LGVEPLVLEK 36 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie~ 36 (184)
++||+|||||++|+++|+.|++ .|.+|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 6899999999999999999999 9999999993
No 171
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.06 E-value=9.2e-10 Score=83.29 Aligned_cols=39 Identities=28% Similarity=0.606 Sum_probs=34.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
+.++|++|||||++|+++|..|++.|.+|+|||+ ...++
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG 41 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGG 41 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCC
Confidence 3568999999999999999999999999999999 44443
No 172
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.05 E-value=1.2e-09 Score=83.17 Aligned_cols=34 Identities=32% Similarity=0.410 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
.+|||+|||||++|+++|+.|++.|.+|+|||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4699999999999999999999999999999953
No 173
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.04 E-value=1.9e-09 Score=88.28 Aligned_cols=39 Identities=38% Similarity=0.605 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~ 166 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGT 166 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCce
Confidence 579999999999999999999999999999998776533
No 174
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.02 E-value=2.4e-09 Score=81.10 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+|+|+.+.+...
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999987643110
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe-c--Cc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV-D--GT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~-~--g~--~~~a~~vI~a 160 (184)
+. .. -...+.+.+.+. |++++++++|+++...+ +. +.+.+. + |+ ++.+|.||.|
T Consensus 208 -----~~------~~----~~~~l~~~l~~~--gV~i~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~i~~D~vv~a 266 (464)
T 2eq6_A 208 -----GD------PE----TAALLRRALEKE--GIRVRTKTKAVGYEKKK---DG-LHVRLEPAEGGEGEEVVVDKVLVA 266 (464)
T ss_dssp -----SC------HH----HHHHHHHHHHHT--TCEEECSEEEEEEEEET---TE-EEEEEEETTCCSCEEEEESEEEEC
T ss_pred -----cC------HH----HHHHHHHHHHhc--CCEEEcCCEEEEEEEeC---CE-EEEEEeecCCCceeEEEcCEEEEC
Confidence 00 00 012333444443 89999999999998764 33 566665 6 76 8999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|..+.
T Consensus 267 ~G~~p~ 272 (464)
T 2eq6_A 267 VGRKPR 272 (464)
T ss_dssp SCEEES
T ss_pred CCcccC
Confidence 998653
No 175
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.01 E-value=2.5e-10 Score=82.65 Aligned_cols=39 Identities=31% Similarity=0.517 Sum_probs=34.9
Q ss_pred cccEEEECCCHHHHHHHHHHHh--CCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKR--LGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~--~g~~v~vie~~~~~~~~ 43 (184)
++||+||||||+||++|++|++ .|++|+|||+.+.+++.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 5899999999999999999974 59999999998877654
No 176
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.99 E-value=4.4e-10 Score=84.78 Aligned_cols=44 Identities=39% Similarity=0.658 Sum_probs=39.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTG 44 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~ 44 (184)
|.+.++||+|||||++|+++|+.|++.|.+|+|+|+.+.+++..
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 66678999999999999999999999999999999988876553
No 177
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.99 E-value=1.3e-09 Score=86.31 Aligned_cols=39 Identities=33% Similarity=0.527 Sum_probs=35.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.+||+|||||++|+++|+.|++.|++|+|||+.+..++.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~ 429 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGR 429 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCE
Confidence 579999999999999999999999999999998766543
No 178
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.98 E-value=3.8e-10 Score=86.79 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+||++|||+|++|+.+|..+++.|.+|+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 48999999999999999999999999999998653
No 179
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.98 E-value=5.7e-09 Score=78.77 Aligned_cols=99 Identities=22% Similarity=0.306 Sum_probs=74.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+... +. ++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~-------------~~-------------------- 209 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-----FD-------------PM-------------------- 209 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SC-------------HH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-----hh-------------HH--------------------
Confidence 47999999999999999999999999999987542100 00 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
-...+.+.+.+. +++++++++|+++...++ .. +.+.+.+|+++.+|.||.|+|..+
T Consensus 210 -------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~--~~-~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 210 -------------------ISETLVEVMNAE--GPQLHTNAIPKAVVKNTD--GS-LTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp -------------------HHHHHHHHHHHH--SCEEECSCCEEEEEECTT--SC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred -------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeCC--cE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 013344445444 899999999999987541 22 678888888899999999999866
Q ss_pred H
Q 030042 166 T 166 (184)
Q Consensus 166 ~ 166 (184)
.
T Consensus 266 ~ 266 (450)
T 1ges_A 266 A 266 (450)
T ss_dssp S
T ss_pred C
Confidence 4
No 180
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.98 E-value=1e-08 Score=76.62 Aligned_cols=109 Identities=20% Similarity=0.278 Sum_probs=78.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
..+++|||+|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 3579999999999999999999999999999876531100
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
.... -...+.+.+.+. |++++++++|+++...+ +.. ..|.+.+|+++.||.||.|+|..
T Consensus 192 ------------~~~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~v-~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 192 ------------AGEA----LSEFYQAEHRAH--GVDLRTGAAMDCIEGDG--TKV-TGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp ------------SCHH----HHHHHHHHHHHT--TCEEEETCCEEEEEESS--SBE-EEEEESSSCEEECSEEEECSCCE
T ss_pred ------------cCHH----HHHHHHHHHHhC--CCEEEECCEEEEEEecC--CcE-EEEEeCCCCEEEcCEEEECCCCc
Confidence 0000 012233333333 89999999999998764 232 57888999999999999999986
Q ss_pred hH--HHhhhCCC
Q 030042 165 ST--VAWWLGLS 174 (184)
Q Consensus 165 s~--~~~~~~~~ 174 (184)
.. +.+.+++.
T Consensus 251 p~~~l~~~~gl~ 262 (415)
T 3lxd_A 251 PCVGALISAGAS 262 (415)
T ss_dssp ESCHHHHHTTCC
T ss_pred cChHHHHhCCCC
Confidence 53 45555554
No 181
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.97 E-value=1e-08 Score=77.62 Aligned_cols=98 Identities=26% Similarity=0.292 Sum_probs=74.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++|+.+.+... +. ++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-----~~-------------~~-------------------- 208 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-----FD-------------PL-------------------- 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SC-------------HH--------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-----cC-------------HH--------------------
Confidence 47999999999999999999999999999987543100 00 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCc-EEEeeEEEecCCcc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGT-IVKTKFLIGCDGIH 164 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~-~~~a~~vI~a~G~~ 164 (184)
....+.+.+.+. +++++.+++|+++...+ +. +.|.+.+|+ ++.+|.||.|+|..
T Consensus 209 -------------------~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 209 -------------------LSATLAENMHAQ--GIETHLEFAVAALERDA---QG-TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp -------------------HHHHHHHHHHHT--TCEEESSCCEEEEEEET---TE-EEEEETTCCEEEEESEEEECSCEE
T ss_pred -------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeC---Ce-EEEEEeCCcEEEEcCEEEECCCCC
Confidence 012334444444 89999999999998764 34 778888998 89999999999986
Q ss_pred hH
Q 030042 165 ST 166 (184)
Q Consensus 165 s~ 166 (184)
+.
T Consensus 264 p~ 265 (463)
T 2r9z_A 264 PN 265 (463)
T ss_dssp ES
T ss_pred cC
Confidence 53
No 182
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.97 E-value=7.6e-10 Score=82.80 Aligned_cols=43 Identities=37% Similarity=0.622 Sum_probs=37.5
Q ss_pred CC-CccccEEEECCCHHHHHHHHHHHhCC-CCeEEEeccCCCCCc
Q 030042 1 MA-MVEKDVVIIGAGIAGLATALALKRLG-VEPLVLEKSDGLRGT 43 (184)
Q Consensus 1 m~-~~~~dv~IiGgG~~Gl~~A~~l~~~g-~~v~vie~~~~~~~~ 43 (184)
|+ .+.+||+|||||++||++|+.|++.| .+|+|+|+.+.+++.
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGK 45 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTT
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCc
Confidence 65 35789999999999999999999999 899999998887653
No 183
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.96 E-value=5.7e-09 Score=78.51 Aligned_cols=110 Identities=16% Similarity=0.163 Sum_probs=66.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV--EPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
+|+|||||++|+++|..|++.|. +|+|||+.+....... .+. .+.....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-------~l~---------~~~~~~~------------- 52 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC-------ALP---------YVIGEVV------------- 52 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG-------GHH---------HHHTTSS-------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc-------hhH---------HHHcCCc-------------
Confidence 69999999999999999999884 6999999764321110 010 0000000
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec---CcEEEeeEEEecC
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---GTIVKTKFLIGCD 161 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g~~~~a~~vI~a~ 161 (184)
.... .........+. .+. +++++.+++|+++.... .. +.+.... +..+.+|.+|+||
T Consensus 53 --~~~~---------~~~~~~~~~~~---~~~--~i~~~~~~~V~~id~~~---~~-~~~~~~~~~~~~~~~yd~lVIAT 112 (437)
T 4eqs_A 53 --EDRR---------YALAYTPEKFY---DRK--QITVKTYHEVIAINDER---QT-VSVLNRKTNEQFEESYDKLILSP 112 (437)
T ss_dssp --CCGG---------GTBCCCHHHHH---HHH--CCEEEETEEEEEEETTT---TE-EEEEETTTTEEEEEECSEEEECC
T ss_pred --cchh---------hhhhcCHHHHH---Hhc--CCEEEeCCeEEEEEccC---cE-EEEEeccCCceEEEEcCEEEECC
Confidence 0000 00011122222 222 78899999999998765 33 4444322 2468899999999
Q ss_pred Ccch
Q 030042 162 GIHS 165 (184)
Q Consensus 162 G~~s 165 (184)
|+..
T Consensus 113 Gs~p 116 (437)
T 4eqs_A 113 GASA 116 (437)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 9764
No 184
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.95 E-value=7.6e-09 Score=77.02 Aligned_cols=108 Identities=21% Similarity=0.262 Sum_probs=78.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+......
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----------------------------------------- 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----------------------------------------- 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-----------------------------------------
Confidence 479999999999999999999999999999875431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
.... -...+.+.+.+. |++++++++|+++...+ +.. ..|.+.+|+++.||.||.|+|..+
T Consensus 182 -----------~~~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~v-~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 182 -----------VTPE----ISSYFHDRHSGA--GIRMHYGVRATEIAAEG--DRV-TGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp -----------SCHH----HHHHHHHHHHHT--TCEEECSCCEEEEEEET--TEE-EEEEETTSCEEECSEEEECCCEEE
T ss_pred -----------cCHH----HHHHHHHHHHhC--CcEEEECCEEEEEEecC--CcE-EEEEeCCCCEEEcCEEEECcCCcc
Confidence 0000 012233333333 89999999999998765 233 568889999999999999999855
Q ss_pred --HHHhhhCCC
Q 030042 166 --TVAWWLGLS 174 (184)
Q Consensus 166 --~~~~~~~~~ 174 (184)
.+.+.+++.
T Consensus 242 ~~~l~~~~gl~ 252 (404)
T 3fg2_P 242 NVEIAAAAGLP 252 (404)
T ss_dssp CCHHHHHTTCC
T ss_pred CHHHHHhCCCC
Confidence 355556554
No 185
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.95 E-value=9.3e-10 Score=83.14 Aligned_cols=42 Identities=29% Similarity=0.424 Sum_probs=38.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccce
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAA 46 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~ 46 (184)
++||+|||+|++||++|+.|++.|.+|+|+|+++.+|+..++
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 589999999999999999999999999999999988776544
No 186
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.94 E-value=5.3e-09 Score=78.05 Aligned_cols=107 Identities=20% Similarity=0.271 Sum_probs=78.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+.+... .+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~---------------------~~------------------- 183 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR---------------------VL------------------- 183 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH---------------------HH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh---------------------hc-------------------
Confidence 57999999999999999999999999999987653100 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
. . --...+.+.+.+. |++++++++|.++..++ .. ..|.+.+|+++.+|.||.|+|..+
T Consensus 184 ------~------~----~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~~-~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 184 ------G------R----RIGAWLRGLLTEL--GVQVELGTGVVGFSGEG---QL-EQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp ------C------H----HHHHHHHHHHHHH--TCEEECSCCEEEEECSS---SC-CEEEETTSCEEECSEEEECSCEEE
T ss_pred ------C------H----HHHHHHHHHHHHC--CCEEEeCCEEEEEeccC---cE-EEEEECCCCEEEcCEEEEeeCCee
Confidence 0 0 0012334444444 89999999999998754 33 678889999999999999999865
Q ss_pred --HHHhhhCCC
Q 030042 166 --TVAWWLGLS 174 (184)
Q Consensus 166 --~~~~~~~~~ 174 (184)
.+.+.+++.
T Consensus 242 ~~~l~~~~gl~ 252 (410)
T 3ef6_A 242 ADQLARQAGLA 252 (410)
T ss_dssp CCHHHHHTTCC
T ss_pred cHHHHHhCCCc
Confidence 355556554
No 187
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.93 E-value=8.6e-09 Score=77.74 Aligned_cols=99 Identities=18% Similarity=0.245 Sum_probs=70.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
..+++|||||++|+.+|..|++.|.+|+++|+.+.+....
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY---------------------------------------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc----------------------------------------
Confidence 4689999999999999999999999999999976431100
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
.... -...+.+.+.+. +++++++++|+++...+ .. +.+.+ +++++.+|.||.|+|..
T Consensus 189 ------------~~~~----~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~v-~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 189 ------------LDKE----FTDVLTEEMEAN--NITIATGETVERYEGDG---RV-QKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp ------------CCHH----HHHHHHHHHHTT--TEEEEESCCEEEEECSS---BC-CEEEE-SSCEEECSEEEECSCEE
T ss_pred ------------CCHH----HHHHHHHHHHhC--CCEEEcCCEEEEEEccC---cE-EEEEE-CCCEEECCEEEECcCCC
Confidence 0000 012333333333 89999999999998653 22 34555 45689999999999976
Q ss_pred hH
Q 030042 165 ST 166 (184)
Q Consensus 165 s~ 166 (184)
+.
T Consensus 246 p~ 247 (447)
T 1nhp_A 246 PN 247 (447)
T ss_dssp ES
T ss_pred CC
Confidence 53
No 188
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.90 E-value=1.8e-08 Score=75.65 Aligned_cols=108 Identities=16% Similarity=0.198 Sum_probs=77.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+....
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~----------------------------------------- 188 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV----------------------------------------- 188 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch-----------------------------------------
Confidence 479999999999999999999999999999865421100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEec--cCCCCCcceEEEEecCcEEEeeEEEecCCc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDS--QTHDGSSPVFIHLVDGTIVKTKFLIGCDGI 163 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~--~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~ 163 (184)
..+. -...+.+.+.+. |++++.+++|+++.. .+ +.. ..|.+.+|+++.+|.||.|+|.
T Consensus 189 -----------~~~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~--~~v-~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 189 -----------TAPP----VSAFYEHLHREA--GVDIRTGTQVCGFEMSTDQ--QKV-TAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp -----------SCHH----HHHHHHHHHHHH--TCEEECSCCEEEEEECTTT--CCE-EEEEETTSCEEECSEEEECCCE
T ss_pred -----------hhHH----HHHHHHHHHHhC--CeEEEeCCEEEEEEeccCC--CcE-EEEEeCCCCEEEcCEEEECCCC
Confidence 0000 012233444444 899999999999986 33 232 4688888989999999999997
Q ss_pred ch--HHHhhhCCC
Q 030042 164 HS--TVAWWLGLS 174 (184)
Q Consensus 164 ~s--~~~~~~~~~ 174 (184)
.+ .+.+.+++.
T Consensus 249 ~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 249 IPNCELASAAGLQ 261 (431)
T ss_dssp EECCHHHHHTTCC
T ss_pred CcCcchhhccCCC
Confidence 54 355555543
No 189
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.90 E-value=1.7e-09 Score=80.37 Aligned_cols=39 Identities=28% Similarity=0.457 Sum_probs=35.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRL-GVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~-g~~v~vie~~~~~~~~ 43 (184)
++||+|||||++|+++|+.|++. |.+|+|+|+.+..++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 68999999999999999999998 9999999998876543
No 190
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.90 E-value=3.4e-09 Score=80.99 Aligned_cols=61 Identities=33% Similarity=0.520 Sum_probs=48.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCcccee------------ee---cccHHHHHHHcCChHH
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAI------------SF---APNAWLALDALGVSHK 65 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~------------~~---~~~~~~~~~~~~~~~~ 65 (184)
.+||+|||||++||++|+.|++.|++|+|+|+.+..++..... .+ .+...++++++|+...
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 4799999999999999999999999999999998887643211 11 2456778888887644
No 191
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.90 E-value=1.2e-08 Score=77.51 Aligned_cols=100 Identities=21% Similarity=0.263 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+... +.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~----------------------------------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-----MD----------------------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----SC-----------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----cC-----------------------------------
Confidence 47999999999999999999999999999997653211 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe-----cCcEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV-----DGTIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~-----~g~~~~a~~vI~a 160 (184)
.. -...+.+.+.+. +++++++++|+++...++ ++. +.+.+. +++++.+|.||.|
T Consensus 224 -------------~~----~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~-~~~-~~v~~~~~~~g~~~~~~~D~vv~a 282 (478)
T 1v59_A 224 -------------GE----VAKATQKFLKKQ--GLDFKLSTKVISAKRNDD-KNV-VEIVVEDTKTNKQENLEAEVLLVA 282 (478)
T ss_dssp -------------HH----HHHHHHHHHHHT--TCEEECSEEEEEEEEETT-TTE-EEEEEEETTTTEEEEEEESEEEEC
T ss_pred -------------HH----HHHHHHHHHHHC--CCEEEeCCEEEEEEEecC-CCe-EEEEEEEcCCCCceEEECCEEEEC
Confidence 00 012333444443 899999999999986210 233 556655 4568999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|..+.
T Consensus 283 ~G~~p~ 288 (478)
T 1v59_A 283 VGRRPY 288 (478)
T ss_dssp SCEEEC
T ss_pred CCCCcC
Confidence 997653
No 192
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.88 E-value=1.9e-08 Score=76.01 Aligned_cols=98 Identities=13% Similarity=0.238 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+...
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------------------------------ 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987643100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cCcEEEeeEEEecCC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGTIVKTKFLIGCDG 162 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~~~~a~~vI~a~G 162 (184)
+ . .--...+.+.+.+. |++++.+++|+++...+ +. +.+.+. +++++.+|.||.|+|
T Consensus 209 -----~--------~--~~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~g~~~~~~~D~vv~a~G 267 (455)
T 1ebd_A 209 -----F--------E--KQMAAIIKKRLKKK--GVEVVTNALAKGAEERE---DG-VTVTYEANGETKTIDADYVLVTVG 267 (455)
T ss_dssp -----S--------C--HHHHHHHHHHHHHT--TCEEEESEEEEEEEEET---TE-EEEEEEETTEEEEEEESEEEECSC
T ss_pred -----c--------C--HHHHHHHHHHHHHC--CCEEEeCCEEEEEEEeC---Ce-EEEEEEeCCceeEEEcCEEEECcC
Confidence 0 0 00012334444443 89999999999998764 33 555554 456799999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
..+.
T Consensus 268 ~~p~ 271 (455)
T 1ebd_A 268 RRPN 271 (455)
T ss_dssp EEES
T ss_pred CCcc
Confidence 8653
No 193
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.87 E-value=4.5e-08 Score=74.47 Aligned_cols=100 Identities=25% Similarity=0.338 Sum_probs=74.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||..|+-+|..|++.|.+|+++|+.+..... +. ++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d-------------~~-------------------- 227 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-----FD-------------EC-------------------- 227 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----SC-------------HH--------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-----cC-------------HH--------------------
Confidence 47999999999999999999999999999987643110 00 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecC-cEEEeeEEEecCCcc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG-TIVKTKFLIGCDGIH 164 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g-~~~~a~~vI~a~G~~ 164 (184)
-...+.+.+.+. |++++.+++|+++...++ +.. +.|.+.+| +++.+|.||.|+|..
T Consensus 228 -------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~-~~~-~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 228 -------------------IQNTITDHYVKE--GINVHKLSKIVKVEKNVE-TDK-LKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp -------------------HHHHHHHHHHHH--TCEEECSCCEEEEEECC--CCC-EEEEETTSCEEEEESEEEECSCEE
T ss_pred -------------------HHHHHHHHHHhC--CeEEEeCCEEEEEEEcCC-CcE-EEEEECCCcEEEEcCEEEECCCCC
Confidence 012344445444 899999999999987541 123 67788888 789999999999976
Q ss_pred hH
Q 030042 165 ST 166 (184)
Q Consensus 165 s~ 166 (184)
+.
T Consensus 285 p~ 286 (479)
T 2hqm_A 285 SH 286 (479)
T ss_dssp EC
T ss_pred Cc
Confidence 53
No 194
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.86 E-value=1.6e-08 Score=76.96 Aligned_cols=98 Identities=20% Similarity=0.255 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||..|+-+|..|++.|.+|+++|+.+.+... + +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-----~---------------------------------~-- 225 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-----A---------------------------------D-- 225 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----S---------------------------------C--
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----c---------------------------------C--
Confidence 47999999999999999999999999999987643110 0 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec----CcEEEeeEEEecC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD----GTIVKTKFLIGCD 161 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~----g~~~~a~~vI~a~ 161 (184)
+. -...+.+.|.+. +++++++++|+++...+ +. +.+.+.+ |+++.+|.||.|+
T Consensus 226 -------------~~----~~~~l~~~l~~~--gV~i~~~~~v~~i~~~~---~~-~~v~~~~~~~~g~~~~~D~vv~a~ 282 (482)
T 1ojt_A 226 -------------RD----LVKVWQKQNEYR--FDNIMVNTKTVAVEPKE---DG-VYVTFEGANAPKEPQRYDAVLVAA 282 (482)
T ss_dssp -------------HH----HHHHHHHHHGGG--EEEEECSCEEEEEEEET---TE-EEEEEESSSCCSSCEEESCEEECC
T ss_pred -------------HH----HHHHHHHHHHhc--CCEEEECCEEEEEEEcC---Ce-EEEEEeccCCCceEEEcCEEEECc
Confidence 00 012334444443 89999999999998764 33 6677666 6778999999999
Q ss_pred CcchH
Q 030042 162 GIHST 166 (184)
Q Consensus 162 G~~s~ 166 (184)
|..+.
T Consensus 283 G~~p~ 287 (482)
T 1ojt_A 283 GRAPN 287 (482)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 97653
No 195
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.86 E-value=3e-09 Score=78.75 Aligned_cols=40 Identities=30% Similarity=0.450 Sum_probs=36.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
..+||+|||||++|+++|+.|++.|.+|+|+|+.+..++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCc
Confidence 4689999999999999999999999999999998776543
No 196
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.85 E-value=3.5e-08 Score=74.88 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=77.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL-GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
.+++|||+|.+|+-+|..|++. |.+|+++++.+......
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 199 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF---------------------------------------- 199 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------------------------------------
Confidence 5899999999999999999999 99999999875431100
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
.. .--...+.+.+.+. |++++.+++|+++...+ .. +.+.+.+|+++.+|.||.|+|..
T Consensus 200 --------------~~--~~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~~-v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 200 --------------TS--KSLSQMLRHDLEKN--DVVVHTGEKVVRLEGEN---GK-VARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp --------------SC--HHHHHHHHHHHHHT--TCEEECSCCEEEEEESS---SB-EEEEEESSCEEECSEEEECSCEE
T ss_pred --------------cC--HHHHHHHHHHHHhc--CCEEEeCCEEEEEEccC---Ce-EEEEEeCCCEEEcCEEEECCCCC
Confidence 00 00012333444443 89999999999998754 33 66888889899999999999986
Q ss_pred h--HHHhhhCCC
Q 030042 165 S--TVAWWLGLS 174 (184)
Q Consensus 165 s--~~~~~~~~~ 174 (184)
+ .+.+.+|+.
T Consensus 258 p~~~l~~~~gl~ 269 (472)
T 3iwa_A 258 PNTQLARDAGLE 269 (472)
T ss_dssp ECCHHHHHHTCC
T ss_pred cCHHHHHhCCcc
Confidence 4 355555554
No 197
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.85 E-value=3e-08 Score=75.66 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=74.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhC---CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 6 KDVVIIGAGIAGLATALALKRL---GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
.+++|||||+.|+-+|..|++. |.+|+++|+.+..... +
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-----~--------------------------------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-----F--------------------------------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT-----S---------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc-----c---------------------------------
Confidence 4799999999999999999998 9999999997643110 0
Q ss_pred CCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCC
Q 030042 83 TGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G 162 (184)
+ .. -...+.+.+.+. |++++++++|+++...+ +.. +.|.+.+|+++.+|.||.|+|
T Consensus 230 d---------------~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~~-~~v~~~~G~~i~~D~vv~a~G 285 (490)
T 1fec_A 230 D---------------SE----LRKQLTEQLRAN--GINVRTHENPAKVTKNA--DGT-RHVVFESGAEADYDVVMLAIG 285 (490)
T ss_dssp C---------------HH----HHHHHHHHHHHT--TEEEEETCCEEEEEECT--TSC-EEEEETTSCEEEESEEEECSC
T ss_pred C---------------HH----HHHHHHHHHHhC--CCEEEeCCEEEEEEEcC--CCE-EEEEECCCcEEEcCEEEEccC
Confidence 0 00 012344444444 89999999999998764 123 778888888899999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
..+.
T Consensus 286 ~~p~ 289 (490)
T 1fec_A 286 RVPR 289 (490)
T ss_dssp EEES
T ss_pred CCcC
Confidence 8653
No 198
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.84 E-value=3.4e-08 Score=75.47 Aligned_cols=98 Identities=17% Similarity=0.273 Sum_probs=74.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|+.|+-+|..|++.|.+|+++|+.+..... +.+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~d~---------------------------------- 223 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-----EDA---------------------------------- 223 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----SSH----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cCH----------------------------------
Confidence 47999999999999999999999999999987543110 000
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
. -...+.+.+.+. |++++.+++|+++...+ +. +.+.+.+|+++.+|.||.|+|..+
T Consensus 224 --------------~----~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~---~~-v~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 --------------D----AALVLEESFAER--GVRLFKNARAASVTRTG---AG-VLVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp --------------H----HHHHHHHHHHHT--TCEEETTCCEEEEEECS---SS-EEEEETTSCEEEESEEEECCCEEE
T ss_pred --------------H----HHHHHHHHHHHC--CCEEEeCCEEEEEEEeC---CE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 0 012334444443 89999999999998764 34 777788888999999999999876
Q ss_pred H
Q 030042 166 T 166 (184)
Q Consensus 166 ~ 166 (184)
.
T Consensus 280 ~ 280 (499)
T 1xdi_A 280 N 280 (499)
T ss_dssp C
T ss_pred C
Confidence 4
No 199
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.84 E-value=3.7e-08 Score=75.21 Aligned_cols=99 Identities=14% Similarity=0.190 Sum_probs=74.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhC---CCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecC
Q 030042 6 KDVVIIGAGIAGLATALALKRL---GVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLG 82 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
.+++|||||..|+-+|..|++. |.+|+++++.+.+... +
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-----~--------------------------------- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-----F--------------------------------- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-----S---------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-----c---------------------------------
Confidence 4799999999999999999998 9999999987543110 0
Q ss_pred CCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCC
Q 030042 83 TGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDG 162 (184)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G 162 (184)
+ .. -...+.+.+.+. |++++++++|+++...+ +.. +.|.+.+|+++.+|.||.|+|
T Consensus 234 d---------------~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~--~~~-~~v~~~~G~~i~~D~vv~a~G 289 (495)
T 2wpf_A 234 D---------------ET----IREEVTKQLTAN--GIEIMTNENPAKVSLNT--DGS-KHVTFESGKTLDVDVVMMAIG 289 (495)
T ss_dssp C---------------HH----HHHHHHHHHHHT--TCEEEESCCEEEEEECT--TSC-EEEEETTSCEEEESEEEECSC
T ss_pred C---------------HH----HHHHHHHHHHhC--CCEEEeCCEEEEEEEcC--Cce-EEEEECCCcEEEcCEEEECCC
Confidence 0 00 012344444444 89999999999998764 123 678888888999999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
..+.
T Consensus 290 ~~p~ 293 (495)
T 2wpf_A 290 RIPR 293 (495)
T ss_dssp EEEC
T ss_pred Cccc
Confidence 8653
No 200
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.84 E-value=4.2e-09 Score=77.44 Aligned_cols=39 Identities=38% Similarity=0.623 Sum_probs=35.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc-CCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS-DGLRG 42 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~-~~~~~ 42 (184)
..+||+|||||++||++|+.|++.|++|+|+|+. +..++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 4679999999999999999999999999999998 76654
No 201
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.84 E-value=4.8e-08 Score=74.70 Aligned_cols=99 Identities=22% Similarity=0.357 Sum_probs=73.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+... +
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~------------------------------------ 215 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-----F------------------------------------ 215 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-----S------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-----c------------------------------------
Confidence 47999999999999999999999999999987643110 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcE-EEeeEEEecCCcc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTI-VKTKFLIGCDGIH 164 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~-~~a~~vI~a~G~~ 164 (184)
+ .--...+.+.+.+. |++++.+++|+++...++ .. +.+.+.+|++ +.+|.||.|+|..
T Consensus 216 --------------d--~~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~--~~-~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 216 --------------D--ESVINVLENDMKKN--NINIVTFADVVEIKKVSD--KN-LSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp --------------C--HHHHHHHHHHHHHT--TCEEECSCCEEEEEESST--TC-EEEEETTSCEEEEESEEEECCCBC
T ss_pred --------------c--hhhHHHHHHHHHhC--CCEEEECCEEEEEEEcCC--ce-EEEEECCCcEEEECCEEEECCCCC
Confidence 0 00012344444444 899999999999987541 23 6778888887 9999999999976
Q ss_pred hH
Q 030042 165 ST 166 (184)
Q Consensus 165 s~ 166 (184)
..
T Consensus 275 p~ 276 (500)
T 1onf_A 275 PD 276 (500)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 202
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.83 E-value=1.5e-08 Score=77.48 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+.+|+|||||++|+.+|..|++.+.+|+|||+.+.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 45799999999999999999999999999999753
No 203
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.82 E-value=5.1e-09 Score=79.75 Aligned_cols=41 Identities=37% Similarity=0.504 Sum_probs=36.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC-CCeEEEeccCCCCCcc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLG-VEPLVLEKSDGLRGTG 44 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g-~~v~vie~~~~~~~~~ 44 (184)
+.+||+|||||++|+++|+.|++.| .+|+|+|+.+..++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 4689999999999999999999998 7999999998776543
No 204
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.82 E-value=4.7e-09 Score=77.66 Aligned_cols=40 Identities=25% Similarity=0.513 Sum_probs=36.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
+++||+|||||++|+++|+.|++.|.+|+|+|+++..++.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 4589999999999999999999999999999998876543
No 205
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.82 E-value=5.3e-08 Score=72.62 Aligned_cols=103 Identities=20% Similarity=0.311 Sum_probs=74.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++|+.+.+....
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 184 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA----------------------------------------- 184 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc-----------------------------------------
Confidence 589999999999999999999999999999976431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
..+. -...+.+.+.+. |++++.+++|+++. + + .|.+.+|+++.+|.||.|+|...
T Consensus 185 -----------~~~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~--~--~----~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 185 -----------APAT----LADFVARYHAAQ--GVDLRFERSVTGSV--D--G----VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp -----------SCHH----HHHHHHHHHHHT--TCEEEESCCEEEEE--T--T----EEEETTSCEEECSEEEECSCEEE
T ss_pred -----------cCHH----HHHHHHHHHHHc--CcEEEeCCEEEEEE--C--C----EEEECCCCEEEcCEEEECcCCCc
Confidence 0000 012334444443 89999999999998 3 2 35667888999999999999764
Q ss_pred --HHHhhhCCC
Q 030042 166 --TVAWWLGLS 174 (184)
Q Consensus 166 --~~~~~~~~~ 174 (184)
.+.+.+++.
T Consensus 240 ~~~l~~~~gl~ 250 (408)
T 2gqw_A 240 NDALARAAGLA 250 (408)
T ss_dssp CCHHHHHHTCC
T ss_pred cHHHHHhCCCC
Confidence 355555543
No 206
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.81 E-value=1.6e-07 Score=72.75 Aligned_cols=109 Identities=20% Similarity=0.349 Sum_probs=76.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++.+..... + +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~---------------------------------~-- 191 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-----V---------------------------------D-- 191 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----S---------------------------------C--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----c---------------------------------C--
Confidence 37999999999999999999999999999987542110 0 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCC----------------CCCcceEEEEecC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTH----------------DGSSPVFIHLVDG 149 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~----------------~~~~~~~v~~~~g 149 (184)
.. -...+.+.+.+. +++++++++++++..... .+.. +.+.+.+|
T Consensus 192 -------------~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g 251 (565)
T 3ntd_A 192 -------------RE----MAGFAHQAIRDQ--GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNG 251 (565)
T ss_dssp -------------HH----HHHHHHHHHHHT--TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTS
T ss_pred -------------HH----HHHHHHHHHHHC--CCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCC
Confidence 00 012333444443 899999999999986300 0133 66777888
Q ss_pred cEEEeeEEEecCCcch--HHHhhhCCC
Q 030042 150 TIVKTKFLIGCDGIHS--TVAWWLGLS 174 (184)
Q Consensus 150 ~~~~a~~vI~a~G~~s--~~~~~~~~~ 174 (184)
+++.+|.||.|+|..+ .+.+.+++.
T Consensus 252 ~~i~~D~vi~a~G~~p~~~l~~~~g~~ 278 (565)
T 3ntd_A 252 ELLETDLLIMAIGVRPETQLARDAGLA 278 (565)
T ss_dssp CEEEESEEEECSCEEECCHHHHHHTCC
T ss_pred CEEEcCEEEECcCCccchHHHHhCCcc
Confidence 8999999999999865 344555543
No 207
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.79 E-value=6.8e-08 Score=73.26 Aligned_cols=98 Identities=26% Similarity=0.323 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++|+.+..... + +
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~---------------------------------d-- 214 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-----L---------------------------------D-- 214 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----S---------------------------------C--
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----C---------------------------------C--
Confidence 47999999999999999999999999999987643110 0 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHH-HhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe--cC--cEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTL-ADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV--DG--TIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~--~g--~~~~a~~vI~a 160 (184)
.. -...+.+.+ .+. +++++++++|+++...+ +. +.+.+. +| +++.+|.||.|
T Consensus 215 -------------~~----~~~~l~~~l~~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~~g~~~~i~~D~vv~a 271 (468)
T 2qae_A 215 -------------ED----VTNALVGALAKNE--KMKFMTSTKVVGGTNNG---DS-VSLEVEGKNGKRETVTCEALLVS 271 (468)
T ss_dssp -------------HH----HHHHHHHHHHHHT--CCEEECSCEEEEEEECS---SS-EEEEEECC---EEEEEESEEEEC
T ss_pred -------------HH----HHHHHHHHHhhcC--CcEEEeCCEEEEEEEcC---Ce-EEEEEEcCCCceEEEECCEEEEC
Confidence 00 012344444 333 89999999999998764 33 556655 66 57999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|..+.
T Consensus 272 ~G~~p~ 277 (468)
T 2qae_A 272 VGRRPF 277 (468)
T ss_dssp SCEEEC
T ss_pred CCcccC
Confidence 998653
No 208
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.78 E-value=7.5e-09 Score=76.15 Aligned_cols=39 Identities=36% Similarity=0.577 Sum_probs=35.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
++|++|||||++|+++|+.|++.|.+|+|+|+.+..++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 369999999999999999999999999999998877654
No 209
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.78 E-value=9.6e-08 Score=72.35 Aligned_cols=97 Identities=23% Similarity=0.298 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++|+.+.+... +. +
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~~-------------~--------------------- 212 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-----ED-------------A--------------------- 212 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----SC-------------H---------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-----cC-------------H---------------------
Confidence 47999999999999999999999999999987543110 00 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe-cC--cEEEeeEEEecCC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV-DG--TIVKTKFLIGCDG 162 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~-~g--~~~~a~~vI~a~G 162 (184)
. -...+.+.+.+. |++++.+++|+++...+ +. +.+.+. +| +++.+|.||.|+|
T Consensus 213 --------------~----~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~g~~~~~~~D~vv~a~G 268 (464)
T 2a8x_A 213 --------------D----VSKEIEKQFKKL--GVTILTATKVESIADGG---SQ-VTVTVTKDGVAQELKAEKVLQAIG 268 (464)
T ss_dssp --------------H----HHHHHHHHHHHH--TCEEECSCEEEEEEECS---SC-EEEEEESSSCEEEEEESEEEECSC
T ss_pred --------------H----HHHHHHHHHHHc--CCEEEeCcEEEEEEEcC---Ce-EEEEEEcCCceEEEEcCEEEECCC
Confidence 0 012344444444 89999999999998764 33 556654 56 5799999999999
Q ss_pred cch
Q 030042 163 IHS 165 (184)
Q Consensus 163 ~~s 165 (184)
..+
T Consensus 269 ~~p 271 (464)
T 2a8x_A 269 FAP 271 (464)
T ss_dssp EEE
T ss_pred CCc
Confidence 765
No 210
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.78 E-value=5e-08 Score=75.01 Aligned_cols=108 Identities=19% Similarity=0.276 Sum_probs=77.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||..|+-+|..|++.|.+|+++|+.+.....
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------------------------------
Confidence 57999999999999999999999999999987643100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcc--eEEEEecCc-EEEeeEEEecCC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSP--VFIHLVDGT-IVKTKFLIGCDG 162 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~--~~v~~~~g~-~~~a~~vI~a~G 162 (184)
+. .. -...+.+.+.+. |++++++++|+++...++ ... +.|.+.+|+ ++.+|.||.|+|
T Consensus 253 -----~~------~~----~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~--~~v~~~~v~~~~G~~~i~aD~Vv~A~G 313 (523)
T 1mo9_A 253 -----KD------NE----TRAYVLDRMKEQ--GMEIISGSNVTRIEEDAN--GRVQAVVAMTPNGEMRIETDFVFLGLG 313 (523)
T ss_dssp -----CS------HH----HHHHHHHHHHHT--TCEEESSCEEEEEEECTT--SBEEEEEEEETTEEEEEECSCEEECCC
T ss_pred -----cc------HH----HHHHHHHHHHhC--CcEEEECCEEEEEEEcCC--CceEEEEEEECCCcEEEEcCEEEECcC
Confidence 00 00 012344444444 899999999999987541 211 457777887 899999999999
Q ss_pred cchH---HHhhhCCC
Q 030042 163 IHST---VAWWLGLS 174 (184)
Q Consensus 163 ~~s~---~~~~~~~~ 174 (184)
..+. +.+.+++.
T Consensus 314 ~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 314 EQPRSAELAKILGLD 328 (523)
T ss_dssp CEECCHHHHHHHTCC
T ss_pred CccCCccCHHHcCCc
Confidence 8663 34555543
No 211
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.77 E-value=7e-08 Score=73.31 Aligned_cols=99 Identities=18% Similarity=0.378 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+....
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG----------------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------------------------------
Confidence 479999999999999999999999999999876431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE-----ecCcEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL-----VDGTIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~-----~~g~~~~a~~vI~a 160 (184)
+. .. -...+.+.+.+. |++++++++|+++...++ .. +.+.. .+++++.+|.||.|
T Consensus 218 -----~~------~~----~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~--~~-~~v~~~~~~~~~~~~i~~D~vv~a 277 (474)
T 1zmd_A 218 -----ID------ME----ISKNFQRILQKQ--GFKFKLNTKVTGATKKSD--GK-IDVSIEAASGGKAEVITCDVLLVC 277 (474)
T ss_dssp -----CC------HH----HHHHHHHHHHHT--TCEEECSEEEEEEEECTT--SC-EEEEEEETTSCCCEEEEESEEEEC
T ss_pred -----cC------HH----HHHHHHHHHHHC--CCEEEeCceEEEEEEcCC--ce-EEEEEEecCCCCceEEEcCEEEEC
Confidence 00 00 012333444443 899999999999987651 21 44443 45678999999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|..+
T Consensus 278 ~G~~p 282 (474)
T 1zmd_A 278 IGRRP 282 (474)
T ss_dssp SCEEE
T ss_pred cCCCc
Confidence 99765
No 212
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.77 E-value=8e-08 Score=72.55 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=71.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|..|+-+|..|++.|.+|+++++.+......
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc-----------------------------------------
Confidence 479999999999999999999999999999876431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
.+ .--...+.+.+.+. |++++.+++|+++...+ .. +.|.+.++ ++.+|.||.|+|...
T Consensus 187 -------------~d--~~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~~-v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 187 -------------FD--KEMVAEVQKSLEKQ--AVIFHFEETVLGIEETA---NG-IVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp -------------CC--HHHHHHHHHHHHTT--TEEEEETCCEEEEEECS---SC-EEEEESSC-EEEESEEEECSCCBC
T ss_pred -------------CC--HHHHHHHHHHHHHc--CCEEEeCCEEEEEEccC---Ce-EEEEECCC-EEEeCEEEECcCCCC
Confidence 00 00012333444433 89999999999998654 33 67777777 899999999999764
No 213
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.77 E-value=1e-07 Score=73.40 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=73.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||+.|+-+|..+++.|.+|+|+++.......
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~------------------------------------------ 261 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGF------------------------------------------ 261 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTS------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccccc------------------------------------------
Confidence 47999999999999999999999999999874321000
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
+. --...+.+.|.+. +++++.++.+.++...+ +. +.|.+.++.++.+|.|++|+|...
T Consensus 262 --------------D~--ei~~~l~~~l~~~--gi~~~~~~~v~~~~~~~---~~-~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 262 --------------DQ--QCAVKVKLYMEEQ--GVMFKNGILPKKLTKMD---DK-ILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp --------------CH--HHHHHHHHHHHHT--TCEEEETCCEEEEEEET---TE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred --------------ch--hHHHHHHHHHHhh--cceeecceEEEEEEecC---Ce-EEEEEcCCCeEEEEEEEEcccccC
Confidence 00 0012344444444 89999999999998876 44 788888888899999999999865
Q ss_pred H
Q 030042 166 T 166 (184)
Q Consensus 166 ~ 166 (184)
.
T Consensus 320 n 320 (542)
T 4b1b_A 320 D 320 (542)
T ss_dssp S
T ss_pred C
Confidence 4
No 214
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.76 E-value=8.2e-08 Score=73.24 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=69.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++|+.+.+....
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 233 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY----------------------------------------- 233 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------------------------------
Confidence 579999999999999999999999999999876431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
.... -...+.+.+.+. |++++.+++|+++..++ .. ..+.+ +|+++.+|.||.|+|...
T Consensus 234 -----------~~~~----~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~v-~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 234 -----------YDRD----LTDLMAKNMEEH--GIQLAFGETVKEVAGNG---KV-EKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp -----------SCHH----HHHHHHHHHHTT--TCEEEETCCEEEEECSS---SC-CEEEE-SSCEEECSEEEECCCEEE
T ss_pred -----------HHHH----HHHHHHHHHHhC--CeEEEeCCEEEEEEcCC---cE-EEEEE-CCcEEECCEEEECCCCCc
Confidence 0000 012333444443 89999999999998632 22 33555 677899999999999755
No 215
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.75 E-value=1.3e-08 Score=76.38 Aligned_cols=43 Identities=19% Similarity=0.328 Sum_probs=38.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccce
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAA 46 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~ 46 (184)
.++||+|||+|++|+++|+.|++.|.+|+|+|+++..++...+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 4689999999999999999999999999999999877665433
No 216
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.74 E-value=5.7e-08 Score=73.69 Aligned_cols=98 Identities=24% Similarity=0.404 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+..... + .+
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-----~-------------~~--------------------- 218 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-----M-------------DA--------------------- 218 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----S-------------CH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----c-------------cH---------------------
Confidence 57999999999999999999999999999987643110 0 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cC--cEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DG--TIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g--~~~~a~~vI~a 160 (184)
. -...+.+.+.+. +++++.+++|+++...+ +. +.+.+. +| +++.+|.||.|
T Consensus 219 --------------~----~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~~~~D~vv~a 274 (470)
T 1dxl_A 219 --------------E----IRKQFQRSLEKQ--GMKFKLKTKVVGVDTSG---DG-VKLTVEPSAGGEQTIIEADVVLVS 274 (470)
T ss_dssp --------------H----HHHHHHHHHHHS--SCCEECSEEEEEEECSS---SS-EEEEEEESSSCCCEEEEESEEECC
T ss_pred --------------H----HHHHHHHHHHHc--CCEEEeCCEEEEEEEcC---Ce-EEEEEEecCCCcceEEECCEEEEC
Confidence 0 012334444443 89999999999998764 33 555554 44 67999999999
Q ss_pred CCcchH
Q 030042 161 DGIHST 166 (184)
Q Consensus 161 ~G~~s~ 166 (184)
+|..+.
T Consensus 275 ~G~~p~ 280 (470)
T 1dxl_A 275 AGRTPF 280 (470)
T ss_dssp CCEEEC
T ss_pred CCCCcC
Confidence 998653
No 217
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.74 E-value=4.1e-08 Score=74.28 Aligned_cols=96 Identities=16% Similarity=0.307 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+... +. +
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~~-------------~--------------------- 212 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-----YD-------------S--------------------- 212 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----SC-------------H---------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----cC-------------H---------------------
Confidence 47999999999999999999999999999997653110 00 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecC--cEEEeeEEEecCCc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG--TIVKTKFLIGCDGI 163 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g--~~~~a~~vI~a~G~ 163 (184)
--...+.+.+.+. +++++.+++|+++.. + . +.+.+.+| +++.+|.||.|+|.
T Consensus 213 ------------------~~~~~l~~~l~~~--gv~i~~~~~v~~i~~-~---~--v~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 213 ------------------ELTAPVAESLKKL--GIALHLGHSVEGYEN-G---C--LLANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp ------------------HHHHHHHHHHHHH--TCEEETTCEEEEEET-T---E--EEEECSSSCCCEECCSCEEECCCE
T ss_pred ------------------HHHHHHHHHHHHC--CCEEEECCEEEEEEe-C---C--EEEEECCCceEEEECCEEEECcCC
Confidence 0012334444444 899999999999986 4 2 44554456 68999999999997
Q ss_pred chH
Q 030042 164 HST 166 (184)
Q Consensus 164 ~s~ 166 (184)
.+.
T Consensus 267 ~p~ 269 (458)
T 1lvl_A 267 RPR 269 (458)
T ss_dssp EEC
T ss_pred CcC
Confidence 653
No 218
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.74 E-value=1.6e-07 Score=71.74 Aligned_cols=95 Identities=19% Similarity=0.309 Sum_probs=69.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++++.+.....
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------------------------------ 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 47999999999999999999999999999987653110
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC-CCeeeeCceEEEEeccCCCCCcceEEEEe--cC--cEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELP-NGTIHFSSKIAAIDSQTHDGSSPVFIHLV--DG--TIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~i~~~~~v~~~~~~~~~~~~~~~v~~~--~g--~~~~a~~vI~a 160 (184)
. ..++.+.+.+.++ +++++.++++++++..+ +. +.+.+. +| +++.+|.||.|
T Consensus 213 ------------------~-d~~~~~~l~~~l~~~V~i~~~~~v~~i~~~~---~~-v~v~~~~~~G~~~~i~~D~Vi~a 269 (492)
T 3ic9_A 213 ------------------Q-DEEMKRYAEKTFNEEFYFDAKARVISTIEKE---DA-VEVIYFDKSGQKTTESFQYVLAA 269 (492)
T ss_dssp ------------------C-CHHHHHHHHHHHHTTSEEETTCEEEEEEECS---SS-EEEEEECTTCCEEEEEESEEEEC
T ss_pred ------------------C-CHHHHHHHHHHHhhCcEEEECCEEEEEEEcC---CE-EEEEEEeCCCceEEEECCEEEEe
Confidence 0 0122222222221 38899999999998765 33 666664 67 68999999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 270 ~G~~p 274 (492)
T 3ic9_A 270 TGRKA 274 (492)
T ss_dssp SCCEE
T ss_pred eCCcc
Confidence 99865
No 219
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.74 E-value=1.2e-07 Score=71.52 Aligned_cols=98 Identities=20% Similarity=0.275 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++|+.+.+....
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY----------------------------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh-----------------------------------------
Confidence 479999999999999999999999999999875431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceE-EEEecCcEEEeeEEEecCCcc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVF-IHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~-v~~~~g~~~~a~~vI~a~G~~ 164 (184)
.... -...+.+.+.+. |++++.+++|+++...+ .. +. +.+ +|+++.+|.||.|+|..
T Consensus 189 -----------~~~~----~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~---~~-v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 189 -----------FDKE----FTDILAKDYEAH--GVNLVLGSKVAAFEEVD---DE-IITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp -----------SCHH----HHHHHHHHHHHT--TCEEEESSCEEEEEEET---TE-EEEEET-TSCEEEESEEEECCCEE
T ss_pred -----------hhhh----HHHHHHHHHHHC--CCEEEcCCeeEEEEcCC---Ce-EEEEEe-CCCEEECCEEEECcCCC
Confidence 0000 012334444444 89999999999998643 22 33 444 77889999999999976
Q ss_pred hH
Q 030042 165 ST 166 (184)
Q Consensus 165 s~ 166 (184)
..
T Consensus 247 p~ 248 (452)
T 2cdu_A 247 PN 248 (452)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 220
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.74 E-value=8.6e-08 Score=70.50 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+.. +.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~---------------------------------- 183 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE---------------------------------- 183 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH----------------------------------
Confidence 5799999999999999999999999999998764310 000
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
. -...+.+.+.+. |++++.+++|+++.. ..+.+.+|+ +.+|.||.|+|..+
T Consensus 184 --------------~----~~~~l~~~l~~~--gV~i~~~~~v~~i~~--------~~v~~~~g~-i~~D~vi~a~G~~p 234 (367)
T 1xhc_A 184 --------------E----LSNMIKDMLEET--GVKFFLNSELLEANE--------EGVLTNSGF-IEGKVKICAIGIVP 234 (367)
T ss_dssp --------------H----HHHHHHHHHHHT--TEEEECSCCEEEECS--------SEEEETTEE-EECSCEEEECCEEE
T ss_pred --------------H----HHHHHHHHHHHC--CCEEEcCCEEEEEEe--------eEEEECCCE-EEcCEEEECcCCCc
Confidence 0 012334444444 899999999999872 225566777 99999999999755
Q ss_pred H--HHhhhCCC
Q 030042 166 T--VAWWLGLS 174 (184)
Q Consensus 166 ~--~~~~~~~~ 174 (184)
. +.+.+++.
T Consensus 235 ~~~ll~~~gl~ 245 (367)
T 1xhc_A 235 NVDLARRSGIH 245 (367)
T ss_dssp CCHHHHHTTCC
T ss_pred CHHHHHhCCCC
Confidence 3 45555543
No 221
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.71 E-value=1.1e-07 Score=72.54 Aligned_cols=107 Identities=25% Similarity=0.320 Sum_probs=74.7
Q ss_pred ccEEEECCCHHHHHHHHHHHh----CCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEec
Q 030042 6 KDVVIIGAGIAGLATALALKR----LGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNL 81 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~----~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
.+++|||||++|+-+|..|++ .|.+|+++++.+.+....
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~------------------------------------- 223 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI------------------------------------- 223 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-------------------------------------
Confidence 479999999999999999976 478899998764320000
Q ss_pred CCCceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecC
Q 030042 82 GTGATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCD 161 (184)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~ 161 (184)
. . .--...+.+.+.+. |++++.+++|+++...+ .. +.|.+.+|+++.+|.||.|+
T Consensus 224 ---------------l--~--~~~~~~~~~~l~~~--GV~v~~~~~V~~i~~~~---~~-~~v~l~dG~~i~aD~Vv~a~ 278 (493)
T 1m6i_A 224 ---------------L--P--EYLSNWTMEKVRRE--GVKVMPNAIVQSVGVSS---GK-LLIKLKDGRKVETDHIVAAV 278 (493)
T ss_dssp ---------------S--C--HHHHHHHHHHHHTT--TCEEECSCCEEEEEEET---TE-EEEEETTSCEEEESEEEECC
T ss_pred ---------------C--C--HHHHHHHHHHHHhc--CCEEEeCCEEEEEEecC---Ce-EEEEECCCCEEECCEEEECC
Confidence 0 0 00012233344333 89999999999998654 33 67888899999999999999
Q ss_pred CcchH--HHhhhCCC
Q 030042 162 GIHST--VAWWLGLS 174 (184)
Q Consensus 162 G~~s~--~~~~~~~~ 174 (184)
|..+. +.+.+++.
T Consensus 279 G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 279 GLEPNVELAKTGGLE 293 (493)
T ss_dssp CEEECCTTHHHHTCC
T ss_pred CCCccHHHHHHcCCc
Confidence 97653 55556654
No 222
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.71 E-value=2.9e-07 Score=71.71 Aligned_cols=104 Identities=18% Similarity=0.355 Sum_probs=75.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++.+.....
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP------------------------------------------ 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc------------------------------------------
Confidence 47999999999999999999999999999986542110
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
... --...+.+.+.+. |++++.+++|+++...+ . .|.+.+|+++.+|.||.|+|..+
T Consensus 226 -------------~~~--~~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~---~---~v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 226 -------------IDY--EMAAYVHEHMKNH--DVELVFEDGVDALEENG---A---VVRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp -------------SCH--HHHHHHHHHHHHT--TCEEECSCCEEEEEGGG---T---EEEETTSCEEECSEEEECSCEEE
T ss_pred -------------CCH--HHHHHHHHHHHHc--CCEEEECCeEEEEecCC---C---EEEECCCCEEEcCEEEEccCCCC
Confidence 000 0012344444444 89999999999998764 2 36667888999999999999765
Q ss_pred --HHHhhhCCC
Q 030042 166 --TVAWWLGLS 174 (184)
Q Consensus 166 --~~~~~~~~~ 174 (184)
.+.+.+++.
T Consensus 283 ~~~~l~~~g~~ 293 (588)
T 3ics_A 283 ESSLAKGAGLA 293 (588)
T ss_dssp CCHHHHHTTCC
T ss_pred ChHHHHhcCce
Confidence 244555543
No 223
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.70 E-value=1.1e-07 Score=72.11 Aligned_cols=96 Identities=14% Similarity=0.189 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++++.+..... .
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------~----------------------------------- 215 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFRE------D----------------------------------- 215 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTS------C-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCCC------C-----------------------------------
Confidence 47999999999999999999999999999986542100 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
+ --...+.+.+.+. |++++.+++|+++...+ .. +.+.+. +.++.+|.||.|+|..+
T Consensus 216 -------------~----~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~---~~-~~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 -------------P----AIGEAVTAAFRAE--GIEVLEHTQASQVAHMD---GE-FVLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp -------------H----HHHHHHHHHHHHT--TCEEETTCCEEEEEEET---TE-EEEEET-TEEEEESEEEECSCEEE
T ss_pred -------------H----HHHHHHHHHHHhC--CCEEEcCCEEEEEEEeC---CE-EEEEEC-CcEEEcCEEEECCCCCc
Confidence 0 0012344444444 89999999999998754 33 566665 45799999999999876
Q ss_pred H
Q 030042 166 T 166 (184)
Q Consensus 166 ~ 166 (184)
.
T Consensus 272 ~ 272 (467)
T 1zk7_A 272 N 272 (467)
T ss_dssp S
T ss_pred C
Confidence 4
No 224
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.69 E-value=1.7e-07 Score=71.05 Aligned_cols=98 Identities=13% Similarity=0.206 Sum_probs=72.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+.....
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~------------------------------------------ 208 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR------------------------------------------ 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999987542100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEE-EecCcEEEeeEEEecCCcc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIH-LVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~-~~~g~~~~a~~vI~a~G~~ 164 (184)
. +. --...+.+.+.+. |++++.+++|+++...++ .. +.|. +.+|+ +.+|.||.|+|..
T Consensus 209 -----------~--~~--~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~--~~-~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 209 -----------F--DQ--DMRRGLHAAMEEK--GIRILCEDIIQSVSADAD--GR-RVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp -----------S--CH--HHHHHHHHHHHHT--TCEEECSCCEEEEEECTT--SC-EEEEESSSCE-EEESEEEECSCEE
T ss_pred -----------c--CH--HHHHHHHHHHHHC--CCEEECCCEEEEEEEcCC--CE-EEEEEcCCCe-EEeCEEEEeeCcc
Confidence 0 00 0012344444444 899999999999987642 22 6777 88887 9999999999986
Q ss_pred hH
Q 030042 165 ST 166 (184)
Q Consensus 165 s~ 166 (184)
+.
T Consensus 268 p~ 269 (463)
T 4dna_A 268 PN 269 (463)
T ss_dssp ES
T ss_pred cC
Confidence 53
No 225
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.69 E-value=1.8e-07 Score=70.35 Aligned_cols=101 Identities=20% Similarity=0.322 Sum_probs=74.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||+.|+-+|..+++.|.+|+++|+.+.....
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~------------------------------------------ 185 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL------------------------------------------ 185 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT------------------------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc------------------------------------------
Confidence 47999999999999999999999999999987643111
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
.... ....+.+.+.+. +++++.+++|++++.. .+.+.+|+++.+|.|+.|+|...
T Consensus 186 -----------~d~~----~~~~~~~~l~~~--gV~i~~~~~v~~~~~~--------~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 186 -----------MDAD----MNQPILDELDKR--EIPYRLNEEINAINGN--------EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp -----------SCGG----GGHHHHHHHHHT--TCCEEESCCEEEEETT--------EEEETTSCEEECSEEEECCCEEE
T ss_pred -----------ccch----hHHHHHHHhhcc--ceEEEeccEEEEecCC--------eeeecCCeEEeeeeEEEEeceec
Confidence 0000 023455555555 8999999999887532 36678899999999999999754
Q ss_pred --HHHhhhCC
Q 030042 166 --TVAWWLGL 173 (184)
Q Consensus 166 --~~~~~~~~ 173 (184)
.+.+..++
T Consensus 241 n~~~~~~~gl 250 (437)
T 4eqs_A 241 NSKFIESSNI 250 (437)
T ss_dssp SCGGGTTSSC
T ss_pred CcHHHHhhhh
Confidence 33444444
No 226
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.69 E-value=2.1e-07 Score=66.86 Aligned_cols=96 Identities=21% Similarity=0.323 Sum_probs=68.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+..... +
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------~--------------------- 184 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE--------------------K--------------------- 184 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC--------------------H---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC--------------------H---------------------
Confidence 47999999999999999999999999999986532100 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec----C--cEEEeeEEEe
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD----G--TIVKTKFLIG 159 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~----g--~~~~a~~vI~ 159 (184)
.-...+.+.+.+. +++++++++++++..++ +.. ..|.+.+ | +++.+|.||.
T Consensus 185 ------------------~~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~--~~v-~~v~~~~~~~~g~~~~i~~D~vv~ 241 (320)
T 1trb_A 185 ------------------ILIKRLMDKVENG--NIILHTNRTLEEVTGDQ--MGV-TGVRLRDTQNSDNIESLDVAGLFV 241 (320)
T ss_dssp ------------------HHHHHHHHHHHTS--SEEEECSCEEEEEEECS--SSE-EEEEEECCTTCCCCEEEECSEEEE
T ss_pred ------------------HHHHHHHHhcccC--CeEEEcCceeEEEEcCC--Cce-EEEEEEeccCCCceEEEEcCEEEE
Confidence 0012333344333 89999999999998764 222 3355543 4 5799999999
Q ss_pred cCCcch
Q 030042 160 CDGIHS 165 (184)
Q Consensus 160 a~G~~s 165 (184)
|+|...
T Consensus 242 a~G~~p 247 (320)
T 1trb_A 242 AIGHSP 247 (320)
T ss_dssp CSCEEE
T ss_pred EeCCCC
Confidence 999754
No 227
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.69 E-value=8.1e-08 Score=73.10 Aligned_cols=97 Identities=18% Similarity=0.268 Sum_probs=69.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
..+++|||||++|+-+|..|++.|.+|+++|+.+..... + +
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~---------------------------------~- 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-----Y---------------------------------D- 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-----S---------------------------------C-
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-----C---------------------------------C-
Confidence 358999999999999999999999999999987542110 0 0
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
.. -...+.+.+.+. |++++++++|+++..++ .. ..+.+. +.++.+|.||.|+|..
T Consensus 227 --------------~~----~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~---~v-~~v~~~-~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 227 --------------GD----MAEYIYKEADKH--HIEILTNENVKAFKGNE---RV-EAVETD-KGTYKADLVLVSVGVK 281 (480)
T ss_dssp --------------HH----HHHHHHHHHHHT--TCEEECSCCEEEEEESS---BE-EEEEET-TEEEECSEEEECSCEE
T ss_pred --------------HH----HHHHHHHHHHHc--CcEEEcCCEEEEEEcCC---cE-EEEEEC-CCEEEcCEEEECcCCC
Confidence 00 012333444433 89999999999998643 22 345554 4579999999999986
Q ss_pred h
Q 030042 165 S 165 (184)
Q Consensus 165 s 165 (184)
+
T Consensus 282 p 282 (480)
T 3cgb_A 282 P 282 (480)
T ss_dssp E
T ss_pred c
Confidence 5
No 228
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.68 E-value=3.1e-07 Score=69.75 Aligned_cols=98 Identities=23% Similarity=0.279 Sum_probs=71.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+.....
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA------------------------------------------ 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------------------------------
Confidence 47999999999999999999999999999987542110
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecC---cEEEeeEEEecCC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG---TIVKTKFLIGCDG 162 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g---~~~~a~~vI~a~G 162 (184)
. . .--...+.+.+.+. +++++.+++|+++...+ +. +.+...++ +.+.+|.||.|+|
T Consensus 219 -----------~--~--~~~~~~l~~~l~~~--Gv~v~~~~~v~~i~~~~---~~-~~v~~~~~~g~~~~~~D~vi~a~G 277 (476)
T 3lad_A 219 -----------V--D--EQVAKEAQKILTKQ--GLKILLGARVTGTEVKN---KQ-VTVKFVDAEGEKSQAFDKLIVAVG 277 (476)
T ss_dssp -----------S--C--HHHHHHHHHHHHHT--TEEEEETCEEEEEEECS---SC-EEEEEESSSEEEEEEESEEEECSC
T ss_pred -----------c--C--HHHHHHHHHHHHhC--CCEEEECCEEEEEEEcC---CE-EEEEEEeCCCcEEEECCEEEEeeC
Confidence 0 0 00012344444444 89999999999998765 33 56666544 5799999999999
Q ss_pred cchH
Q 030042 163 IHST 166 (184)
Q Consensus 163 ~~s~ 166 (184)
....
T Consensus 278 ~~p~ 281 (476)
T 3lad_A 278 RRPV 281 (476)
T ss_dssp EEEC
T ss_pred Cccc
Confidence 7653
No 229
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.68 E-value=2e-07 Score=71.16 Aligned_cols=97 Identities=19% Similarity=0.306 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++.+..... +
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~------------------------------------ 237 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-----M------------------------------------ 237 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----S------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----C------------------------------------
Confidence 47999999999999999999999999999987543110 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec---C--cEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---G--TIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g--~~~~a~~vI~a 160 (184)
. .--...+.+.+.+. +++++.+++|+++...+ +. +.+.+.+ | +++.+|.||.|
T Consensus 238 --------------d--~~~~~~l~~~l~~~--gV~v~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~i~~D~Vi~a 295 (491)
T 3urh_A 238 --------------D--GEVAKQLQRMLTKQ--GIDFKLGAKVTGAVKSG---DG-AKVTFEPVKGGEATTLDAEVVLIA 295 (491)
T ss_dssp --------------C--HHHHHHHHHHHHHT--TCEEECSEEEEEEEEET---TE-EEEEEEETTSCCCEEEEESEEEEC
T ss_pred --------------C--HHHHHHHHHHHHhC--CCEEEECCeEEEEEEeC---CE-EEEEEEecCCCceEEEEcCEEEEe
Confidence 0 00012334444443 89999999999998765 33 5555542 4 57999999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 296 ~G~~p 300 (491)
T 3urh_A 296 TGRKP 300 (491)
T ss_dssp CCCEE
T ss_pred eCCcc
Confidence 99765
No 230
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.65 E-value=2.8e-07 Score=66.60 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=69.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 4799999999999999999999999999998654210
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec-----CcEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD-----GTIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~-----g~~~~a~~vI~a 160 (184)
...+.+.+.+. .+++++.+++++++...+ +.. ..|.+.+ ++++.+|.||.|
T Consensus 211 --------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~~--~~~-~~v~~~~~~~g~~~~i~~D~vi~a 266 (338)
T 3itj_A 211 --------------------STIMQKRAEKN-EKIEILYNTVALEAKGDG--KLL-NALRIKNTKKNEETDLPVSGLFYA 266 (338)
T ss_dssp --------------------CHHHHHHHHHC-TTEEEECSEEEEEEEESS--SSE-EEEEEEETTTTEEEEEECSEEEEC
T ss_pred --------------------CHHHHHHHHhc-CCeEEeecceeEEEEccc--CcE-EEEEEEECCCCceEEEEeCEEEEE
Confidence 12344444443 289999999999998765 222 4455554 357899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 267 ~G~~p 271 (338)
T 3itj_A 267 IGHTP 271 (338)
T ss_dssp SCEEE
T ss_pred eCCCC
Confidence 99754
No 231
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.64 E-value=3.1e-08 Score=75.64 Aligned_cols=39 Identities=46% Similarity=0.637 Sum_probs=36.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.+||+|||||++|+++|+.|++.|.+|+|+|+.+..++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 579999999999999999999999999999998877654
No 232
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.63 E-value=4.1e-07 Score=69.26 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=69.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++....... .+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~~-------------------d~--------------------- 227 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGF-------------------DQ--------------------- 227 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTTS-------------------CH---------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCccc-------------------CH---------------------
Confidence 47999999999999999999999999999874211000 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCc-----EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGT-----IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~-----~~~a~~vI~a 160 (184)
--...+.+.+.+. +++++.++++.++...++ .. +.|.+.++. ++.+|.||.|
T Consensus 228 ------------------~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~--~~-~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 228 ------------------QMAELVAASMEER--GIPFLRKTVPLSVEKQDD--GK-LLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp ------------------HHHHHHHHHHHHT--TCCEEETEEEEEEEECTT--SC-EEEEEEETTTCCEEEEEESEEEEC
T ss_pred ------------------HHHHHHHHHHHhC--CCEEEeCCEEEEEEEcCC--Cc-EEEEEecCCCCceeEEEcCEEEEC
Confidence 0012334444444 899999999999987542 22 566665543 7899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 285 ~G~~p 289 (483)
T 3dgh_A 285 IGRKG 289 (483)
T ss_dssp SCEEE
T ss_pred ccccc
Confidence 99754
No 233
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.62 E-value=7.1e-07 Score=64.30 Aligned_cols=92 Identities=23% Similarity=0.273 Sum_probs=67.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 189 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------------------------------------------- 189 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-------------------------------------------
Confidence 4799999999999999999999999999998653200
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~a~~vI~a 160 (184)
...+.+.+.+. .+++++.+++++++..++ .. ..|.+. +|+ ++.+|.||.|
T Consensus 190 --------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~~---~v-~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 190 --------------------NKVAQARAFAN-PKMKFIWDTAVEEIQGAD---SV-SGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESS---SE-EEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------------chHHHHHHHhc-CCceEecCCceEEEccCC---cE-EEEEEEECCCCcEEEEEcCEEEEc
Confidence 01233333322 289999999999998643 32 345544 564 7899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 245 ~G~~p 249 (325)
T 2q7v_A 245 IGHVP 249 (325)
T ss_dssp SCEEE
T ss_pred cCCCC
Confidence 99754
No 234
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.61 E-value=3.3e-08 Score=77.45 Aligned_cols=39 Identities=28% Similarity=0.383 Sum_probs=35.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..++
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 368999999999999999999999999999999876653
No 235
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.61 E-value=3.7e-08 Score=74.42 Aligned_cols=38 Identities=42% Similarity=0.543 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
.+||+|||||++|+++|+.|++.|++|+|||+.+..++
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCC
Confidence 47999999999999999999999999999999876653
No 236
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.61 E-value=3.5e-07 Score=66.12 Aligned_cols=95 Identities=13% Similarity=0.192 Sum_probs=69.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|.+|+-+|..|++.|.+|+++++.+..... +.
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~--------------------~~-------------------- 192 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH--------------------EA-------------------- 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC--------------------HH--------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc--------------------HH--------------------
Confidence 47999999999999999999999999999986542100 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cC--cEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DG--TIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g--~~~~a~~vI~a 160 (184)
....+.+.+.+. +++++.++++.++..++ .. ..|.+. +| +++.+|.||.|
T Consensus 193 -------------------~~~~l~~~l~~~--gv~v~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2zbw_A 193 -------------------SVKELMKAHEEG--RLEVLTPYELRRVEGDE---RV-RWAVVFHNQTQEELALEVDAVLIL 247 (335)
T ss_dssp -------------------HHHHHHHHHHTT--SSEEETTEEEEEEEESS---SE-EEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------HHHHHHhccccC--CeEEecCCcceeEccCC---Ce-eEEEEEECCCCceEEEecCEEEEe
Confidence 012344444433 89999999999998743 32 345554 66 57999999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|..+
T Consensus 248 ~G~~p 252 (335)
T 2zbw_A 248 AGYIT 252 (335)
T ss_dssp CCEEE
T ss_pred ecCCC
Confidence 99765
No 237
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.61 E-value=6.2e-07 Score=64.44 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=67.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-------------------------------------------
Confidence 4799999999999999999999999999998643200
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~a~~vI~a 160 (184)
...+.+.+.+. +++++++++++++..++ +.. ..+.+. +|+ ++.+|.||.|
T Consensus 193 --------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 193 --------------------ENAYVQEIKKR--NIPYIMNAQVTEIVGDG--KKV-TGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp --------------------CHHHHHHHHHT--TCCEECSEEEEEEEESS--SSE-EEEEEEETTTCCEEEECCSEEEEC
T ss_pred --------------------CHHHHHHHhcC--CcEEEcCCeEEEEecCC--ceE-EEEEEEEcCCCceEEEecCEEEEe
Confidence 01233444433 89999999999998764 222 344443 564 6899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 248 ~G~~p 252 (319)
T 3cty_A 248 VGLIP 252 (319)
T ss_dssp CCEEE
T ss_pred eCCcc
Confidence 99754
No 238
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=4.2e-08 Score=75.01 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
++||+|||||++|+++|..|++.|.+|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999974
No 239
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.59 E-value=5.3e-07 Score=68.20 Aligned_cols=133 Identities=13% Similarity=0.184 Sum_probs=74.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCCCCCccc----eeeecccHHHHHHHcCChHHHHhcCCCccceEE
Q 030042 5 EKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDGLRGTGA----AISFAPNAWLALDALGVSHKLASIYPPVNRISV 78 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
..+|+|||||.+|+-+|..|++. +.+|+++++.+....... ...+.+.....+..+. +.......
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~--~~~~~~~~------- 297 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSRE--HAERERLL------- 297 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSC--HHHHHHHH-------
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCC--HHHHHHHH-------
Confidence 35899999999999999999998 889999999875422100 0001111111221110 00000000
Q ss_pred EecCCCceeeeecCCCCCCCCCCeeeeH---HHHHHHHHh----hCCCCeeeeCceEEEEeccCCCCCcceEEEEe---c
Q 030042 79 TNLGTGATQETSLTGKFGDGSGPRFIHR---KKLLQTLAD----ELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---D 148 (184)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~l~~----~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~ 148 (184)
... .... +. .++. ..+.+.+.. ...+++++.+++|+++...+ +. +.+.+. +
T Consensus 298 -~~~----~~~~------~~----~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~---~~-~~v~~~~~~~ 358 (463)
T 3s5w_A 298 -REY----HNTN------YS----VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA---QG-IELALRDAGS 358 (463)
T ss_dssp -HHT----GGGT------SS----CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET---TE-EEEEEEETTT
T ss_pred -HHh----hccC------CC----cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC---CE-EEEEEEEcCC
Confidence 000 0000 00 0111 111111111 11388999999999998765 44 677766 6
Q ss_pred Cc--EEEeeEEEecCCcch
Q 030042 149 GT--IVKTKFLIGCDGIHS 165 (184)
Q Consensus 149 g~--~~~a~~vI~a~G~~s 165 (184)
|+ ++.+|.||.|+|...
T Consensus 359 g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 359 GELSVETYDAVILATGYER 377 (463)
T ss_dssp CCEEEEEESEEEECCCEEC
T ss_pred CCeEEEECCEEEEeeCCCC
Confidence 65 489999999999753
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.59 E-value=6.7e-07 Score=67.47 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++.+......
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS----------------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh-----------------------------------------
Confidence 489999999999999999999999999999876431100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCC-CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELP-NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
. ..++.+.+.+.+. .++++.++++.++...+ . +.....+++++.+|.||.|+|..
T Consensus 188 ------------------~-~~~~~~~l~~~l~~~v~i~~~~~v~~i~~~~---~--v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 ------------------F-DKEVTDILEEKLKKHVNLRLQEITMKIEGEE---R--VEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp ------------------S-CHHHHHHHHHHHTTTSEEEESCCEEEEECSS---S--CCEEEETTEEEECSEEEECSCEE
T ss_pred ------------------c-CHHHHHHHHHHHHhCcEEEeCCeEEEEeccC---c--EEEEEeCCCEEECCEEEEeeCCc
Confidence 0 0223333333322 38889999999987653 2 32334567789999999999986
Q ss_pred h--HHHhhhCCC
Q 030042 165 S--TVAWWLGLS 174 (184)
Q Consensus 165 s--~~~~~~~~~ 174 (184)
. .+.+.+++.
T Consensus 244 p~~~l~~~~gl~ 255 (449)
T 3kd9_A 244 PNIELAKQLGVR 255 (449)
T ss_dssp ECCHHHHHTTCC
T ss_pred cCHHHHHhCCcc
Confidence 4 344555543
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.59 E-value=7.8e-07 Score=63.64 Aligned_cols=93 Identities=13% Similarity=0.180 Sum_probs=67.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+.+..
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 180 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC------------------------------------------- 180 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC-------------------------------------------
Confidence 5799999999999999999999999999998653200
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~a~~vI~a 160 (184)
...+.+.+.+. .+++++.+++++++...+ +.. ..+.+. +|+ ++.+|.||.|
T Consensus 181 --------------------~~~~~~~l~~~-~gv~v~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~a 236 (311)
T 2q0l_A 181 --------------------APITLEHAKNN-DKIEFLTPYVVEEIKGDA--SGV-SSLSIKNTATNEKRELVVPGFFIF 236 (311)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEETTEEEEEEEEET--TEE-EEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------------CHHHHHHHhhC-CCeEEEeCCEEEEEECCC--CcE-eEEEEEecCCCceEEEecCEEEEE
Confidence 01233334332 289999999999998763 121 245544 564 7899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 237 ~G~~p 241 (311)
T 2q0l_A 237 VGYDV 241 (311)
T ss_dssp SCEEE
T ss_pred ecCcc
Confidence 99754
No 242
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.58 E-value=7.7e-07 Score=67.86 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=68.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++....... .+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~-------------------d~--------------------- 225 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGF-------------------DQ--------------------- 225 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTS-------------------CH---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccC-------------------CH---------------------
Confidence 47999999999999999999999999999975311000 00
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec---Cc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---GT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g~--~~~a~~vI~a 160 (184)
. -...+.+.+.+. +++++.++++.++...++ .. +.+.+.+ |+ ++.+|.||.|
T Consensus 226 --------------~----~~~~l~~~l~~~--gv~~~~~~~v~~i~~~~~--~~-~~v~~~~~~~g~~~~~~~D~vi~a 282 (488)
T 3dgz_A 226 --------------Q----MSSLVTEHMESH--GTQFLKGCVPSHIKKLPT--NQ-LQVTWEDHASGKEDTGTFDTVLWA 282 (488)
T ss_dssp --------------H----HHHHHHHHHHHT--TCEEEETEEEEEEEECTT--SC-EEEEEEETTTTEEEEEEESEEEEC
T ss_pred --------------H----HHHHHHHHHHHC--CCEEEeCCEEEEEEEcCC--Cc-EEEEEEeCCCCeeEEEECCEEEEc
Confidence 0 012334444444 899999999999987541 32 5555544 54 4789999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 283 ~G~~p 287 (488)
T 3dgz_A 283 IGRVP 287 (488)
T ss_dssp SCEEE
T ss_pred ccCCc
Confidence 99754
No 243
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.56 E-value=9.8e-07 Score=63.26 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=72.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------- 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------------------------
Confidence 5799999999999999999999999999998654210
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec---Cc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---GT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g~--~~~a~~vI~a 160 (184)
...+.+.+.+. .+++++.+++++++..++ .. ..|.+.+ |+ ++.+|.||.|
T Consensus 192 --------------------~~~~~~~~~~~-~gv~~~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~~~~D~vv~a 246 (323)
T 3f8d_A 192 --------------------QPIYVETVKKK-PNVEFVLNSVVKEIKGDK---VV-KQVVVENLKTGEIKELNVNGVFIE 246 (323)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESS---SE-EEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------------CHHHHHHHHhC-CCcEEEeCCEEEEEeccC---ce-eEEEEEECCCCceEEEEcCEEEEE
Confidence 01233333332 288999999999998764 33 4566654 65 7899999999
Q ss_pred CCcch--HHHhhhCCC
Q 030042 161 DGIHS--TVAWWLGLS 174 (184)
Q Consensus 161 ~G~~s--~~~~~~~~~ 174 (184)
+|... .+.+.+++.
T Consensus 247 ~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 247 IGFDPPTDFAKSNGIE 262 (323)
T ss_dssp CCEECCHHHHHHTTCC
T ss_pred ECCCCChhHHhhcCee
Confidence 99754 344545443
No 244
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.55 E-value=1.1e-07 Score=72.24 Aligned_cols=54 Identities=9% Similarity=0.221 Sum_probs=43.6
Q ss_pred HHHHHHHhhCC----------CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 108 KLLQTLADELP----------NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 108 ~l~~~l~~~~~----------~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
.+.+.|.+.+. +.+|+++++|+++...+ +. +.|.+.+|+++.||.||.|++.+.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~---~~-v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP---GG-VTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS---SC-EEEEETTSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC---Cc-EEEEECCCCEEEcCEEEEecCHHH
Confidence 56677776653 35899999999999875 44 779999998999999999998654
No 245
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.54 E-value=9.7e-08 Score=70.16 Aligned_cols=34 Identities=38% Similarity=0.556 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+||+|||||++|+.+|+.|++.|.+|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 6999999999999999999999999999998763
No 246
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.54 E-value=8.9e-07 Score=67.31 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=70.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++.+.....
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 225 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------------------------------ 225 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999986542100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec-------CcEEEeeEEE
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD-------GTIVKTKFLI 158 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~-------g~~~~a~~vI 158 (184)
. + .--...+.+.+.+. +++++.++++++++..++ +.. +.+.+.+ |+++.+|.||
T Consensus 226 -----------~--d--~~~~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~-~~~-~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 226 -----------F--D--SMISTNCTEELENA--GVEVLKFSQVKEVKKTLS-GLE-VSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp -----------S--C--HHHHHHHHHHHHHT--TCEEETTEEEEEEEECSS-SEE-EEEEECCTTSCCEEEEEEEESEEE
T ss_pred -----------c--C--HHHHHHHHHHHHHC--CCEEEeCCEEEEEEEcCC-CcE-EEEEEccCCCCcccceEEEcCEEE
Confidence 0 0 00012344444444 899999999999987642 112 5566654 2578999999
Q ss_pred ecCCcch
Q 030042 159 GCDGIHS 165 (184)
Q Consensus 159 ~a~G~~s 165 (184)
.|+|...
T Consensus 287 ~a~G~~p 293 (478)
T 3dk9_A 287 WAIGRVP 293 (478)
T ss_dssp ECSCEEE
T ss_pred Eeecccc
Confidence 9999754
No 247
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.54 E-value=6.5e-07 Score=65.56 Aligned_cols=104 Identities=17% Similarity=0.243 Sum_probs=67.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+..... . .+ .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------------~-------------~d--~-- 208 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------------D-------------AD--P-- 208 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------------------------------------C--
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------------C-------------CC--C--
Confidence 47999999999999999999999999999986542100 0 00 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCC-CeeeeCceEEEEeccCCCCCcceEEEEecCcEEE-eeEEEecCCc
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPN-GTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVK-TKFLIGCDGI 163 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~-a~~vI~a~G~ 163 (184)
. .... ......+.+.+.+. + ++++.+++|.++...+ +. +.+.+.+|+.+. +|.||.|+|.
T Consensus 209 -------~---~~~~--~~~~~~l~~~l~~~--g~v~~~~~~~v~~i~~~~---~~-~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 209 -------S---VRLS--PYTRQRLGNVIKQG--ARIEMNVHYTVKDIDFNN---GQ-YHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp -------T---TSCC--HHHHHHHHHHHHTT--CCEEEECSCCEEEEEEET---TE-EEEEESSSCCEEESSCCEECCCB
T ss_pred -------C---ccCC--HHHHHHHHHHHhhC--CcEEEecCcEEEEEEecC---Cc-eEEEecCCeEeccCCceEEeecc
Confidence 0 0000 00012333333332 5 8999999999997543 33 678888887665 5999999997
Q ss_pred ch
Q 030042 164 HS 165 (184)
Q Consensus 164 ~s 165 (184)
..
T Consensus 271 ~~ 272 (369)
T 3d1c_A 271 DA 272 (369)
T ss_dssp CG
T ss_pred CC
Confidence 54
No 248
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.53 E-value=1.6e-06 Score=61.94 Aligned_cols=93 Identities=19% Similarity=0.255 Sum_probs=67.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.+.+|+++++.+....
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------- 181 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------- 181 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc-------------------------------------------
Confidence 4799999999999999999999999999998653200
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec---Cc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD---GT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~---g~--~~~a~~vI~a 160 (184)
...+.+.+.+. .+++++.+++++++..++ +.. ..+.+.+ |+ ++.+|.||.|
T Consensus 182 --------------------~~~~~~~l~~~-~gv~v~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~a 237 (310)
T 1fl2_A 182 --------------------DQVLQDKLRSL-KNVDIILNAQTTEVKGDG--SKV-VGLEYRDRVSGDIHNIELAGIFVQ 237 (310)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEESSEEEEEEEESS--SSE-EEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------------cHHHHHHHhhC-CCeEEecCCceEEEEcCC--CcE-EEEEEEECCCCcEEEEEcCEEEEe
Confidence 01233344432 388999999999998654 222 2455443 53 6889999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 238 ~G~~p 242 (310)
T 1fl2_A 238 IGLLP 242 (310)
T ss_dssp SCEEE
T ss_pred eCCcc
Confidence 99754
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.53 E-value=1.1e-06 Score=66.65 Aligned_cols=97 Identities=26% Similarity=0.345 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||++|+-+|..|++.|.+|+++++.+.....
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 210 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT------------------------------------------ 210 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC------------------------------------------
Confidence 47999999999999999999999999999987543110
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe--cCc--EEEeeEEEecC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV--DGT--IVKTKFLIGCD 161 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~--~g~--~~~a~~vI~a~ 161 (184)
. . ..++.+.+.+.+. ++++.+++|+++...++ +. +.+.+. +|+ ++.+|.||.|+
T Consensus 211 -------------~----~-d~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~--~~-v~v~~~~~~G~~~~i~~D~vi~a~ 268 (466)
T 3l8k_A 211 -------------L----E-DQDIVNTLLSILK-LNIKFNSPVTEVKKIKD--DE-YEVIYSTKDGSKKSIFTNSVVLAA 268 (466)
T ss_dssp -------------S----C-CHHHHHHHHHHHC-CCEECSCCEEEEEEEET--TE-EEEEECCTTSCCEEEEESCEEECC
T ss_pred -------------C----C-CHHHHHHHHhcCE-EEEEECCEEEEEEEcCC--Cc-EEEEEEecCCceEEEEcCEEEECc
Confidence 0 0 0234444444443 88999999999987531 23 667776 565 89999999999
Q ss_pred CcchH
Q 030042 162 GIHST 166 (184)
Q Consensus 162 G~~s~ 166 (184)
|....
T Consensus 269 G~~p~ 273 (466)
T 3l8k_A 269 GRRPV 273 (466)
T ss_dssp CEEEC
T ss_pred CCCcc
Confidence 97653
No 250
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.50 E-value=9e-08 Score=73.55 Aligned_cols=36 Identities=31% Similarity=0.422 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-CCCCeEEEeccCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKR-LGVEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie~~~~ 39 (184)
.+||+||||||++|+.+|..|++ .+.+|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46999999999999999999998 5789999998753
No 251
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.49 E-value=9e-08 Score=72.37 Aligned_cols=39 Identities=21% Similarity=0.213 Sum_probs=34.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-C------CCCeEEEeccCCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKR-L------GVEPLVLEKSDGLRG 42 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~-~------g~~v~vie~~~~~~~ 42 (184)
..+||+|||||++|+.+|..|++ . |.+|+|||+.+.+++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 46899999999999999999999 7 899999999876643
No 252
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.49 E-value=2.3e-06 Score=61.80 Aligned_cols=95 Identities=18% Similarity=0.241 Sum_probs=66.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------- 196 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------- 196 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-------------------------------------------
Confidence 4799999999999999999999999999998754200
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cC--cEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DG--TIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g--~~~~a~~vI~a 160 (184)
...+.+.+.+. .+++++++++++++..+++ +.....+.+. +| +++.+|.||.|
T Consensus 197 --------------------~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a 254 (333)
T 1vdc_A 197 --------------------SKIMQQRALSN-PKIDVIWNSSVVEAYGDGE-RDVLGGLKVKNVVTGDVSDLKVSGLFFA 254 (333)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESSS-SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------------cHHHHHHHHhC-CCeeEecCCceEEEeCCCC-ccceeeEEEEecCCCceEEEecCEEEEE
Confidence 01222222222 2899999999999987541 0021234443 45 57899999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 255 ~G~~p 259 (333)
T 1vdc_A 255 IGHEP 259 (333)
T ss_dssp SCEEE
T ss_pred eCCcc
Confidence 99754
No 253
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.49 E-value=1.3e-06 Score=62.37 Aligned_cols=93 Identities=15% Similarity=0.258 Sum_probs=67.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.+.+|+++++.+.....
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~------------------------------------------ 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAA------------------------------------------ 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSC------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCC------------------------------------------
Confidence 47999999999999999999999999999986542000
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe--cCc--EEEeeEEEecC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV--DGT--IVKTKFLIGCD 161 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~--~g~--~~~a~~vI~a~ 161 (184)
..+.+.+.+. .++++++++++.++...+ +.. ..+.+. +|+ ++.+|.||.|+
T Consensus 186 ---------------------~~~~~~~~~~-~gv~~~~~~~v~~i~~~~--~~~-~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 186 ---------------------PSTVEKVKKN-EKIELITSASVDEVYGDK--MGV-AGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp ---------------------HHHHHHHHHC-TTEEEECSCEEEEEEEET--TEE-EEEEEECTTSCEEEECCSCEEECS
T ss_pred ---------------------HHHHHHHHhc-CCeEEEeCcEEEEEEcCC--CcE-EEEEEEcCCCCeEEeecCeEEEEE
Confidence 1222223222 289999999999998765 122 334443 775 78899999999
Q ss_pred Ccch
Q 030042 162 GIHS 165 (184)
Q Consensus 162 G~~s 165 (184)
|...
T Consensus 241 G~~p 244 (315)
T 3r9u_A 241 GLNV 244 (315)
T ss_dssp CEEE
T ss_pred cCCC
Confidence 9754
No 254
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.49 E-value=1.1e-07 Score=73.49 Aligned_cols=36 Identities=33% Similarity=0.504 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+||++|||+|++|+++|+.|++.|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 469999999999999999999999999999999764
No 255
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.49 E-value=3.4e-07 Score=66.93 Aligned_cols=96 Identities=23% Similarity=0.341 Sum_probs=67.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|.+|+-+|..|++.+.+|+++++.+.+... + .
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~-------~-------------~-------------------- 203 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH-------G-------------K-------------------- 203 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-------S-------------H--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-------H-------------H--------------------
Confidence 47999999999999999999999999999986542100 0 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE--ecC--cEEEeeEEEecC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL--VDG--TIVKTKFLIGCD 161 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~--~~g--~~~~a~~vI~a~ 161 (184)
....+.+.+.+. +++++++++++++...+ +.. ..|.+ .+| +++.+|.||.|+
T Consensus 204 -------------------~~~~l~~~~~~~--gv~i~~~~~v~~i~~~~--~~v-~~v~~~~~~g~~~~i~~D~vi~a~ 259 (360)
T 3ab1_A 204 -------------------TAHEVERARANG--TIDVYLETEVASIEESN--GVL-TRVHLRSSDGSKWTVEADRLLILI 259 (360)
T ss_dssp -------------------HHHSSHHHHHHT--SEEEESSEEEEEEEEET--TEE-EEEEEEETTCCEEEEECSEEEECC
T ss_pred -------------------HHHHHHHHhhcC--ceEEEcCcCHHHhccCC--Cce-EEEEEEecCCCeEEEeCCEEEECC
Confidence 001122223332 79999999999998764 221 23444 367 578999999999
Q ss_pred Ccch
Q 030042 162 GIHS 165 (184)
Q Consensus 162 G~~s 165 (184)
|...
T Consensus 260 G~~p 263 (360)
T 3ab1_A 260 GFKS 263 (360)
T ss_dssp CBCC
T ss_pred CCCC
Confidence 9754
No 256
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.45 E-value=2.4e-06 Score=65.94 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+|+|||+|.+|+-+|..|++.+.+|+++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5799999999999999999999999999999875
No 257
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.45 E-value=2.1e-06 Score=61.80 Aligned_cols=99 Identities=20% Similarity=0.207 Sum_probs=70.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|.+|+-+|..|++.+.+|+++++.+.....
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------------ 192 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH------------------------------------------ 192 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC------------------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc------------------------------------------
Confidence 47999999999999999999999999999986542100
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEec-----CcEEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVD-----GTIVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~-----g~~~~a~~vI~a 160 (184)
....+.+.+. +++++.++++.++...+ .. ..+.+.+ ++++.+|.||.|
T Consensus 193 ---------------------~~~~~~l~~~--gv~~~~~~~v~~i~~~~---~~-~~v~~~~~~~g~~~~~~~D~vv~a 245 (332)
T 3lzw_A 193 ---------------------EHSVENLHAS--KVNVLTPFVPAELIGED---KI-EQLVLEEVKGDRKEILEIDDLIVN 245 (332)
T ss_dssp ---------------------HHHHHHHHHS--SCEEETTEEEEEEECSS---SC-CEEEEEETTSCCEEEEECSEEEEC
T ss_pred ---------------------HHHHHHHhcC--CeEEEeCceeeEEecCC---ce-EEEEEEecCCCceEEEECCEEEEe
Confidence 0112223333 89999999999998765 22 4455544 357899999999
Q ss_pred CCcch--HHHhhhCC
Q 030042 161 DGIHS--TVAWWLGL 173 (184)
Q Consensus 161 ~G~~s--~~~~~~~~ 173 (184)
+|... .+.+.+++
T Consensus 246 ~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 246 YGFVSSLGPIKNWGL 260 (332)
T ss_dssp CCEECCCGGGGGSSC
T ss_pred eccCCCchHHhhcCc
Confidence 99755 23344443
No 258
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.44 E-value=2.2e-07 Score=74.12 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.+||+|||||++|+++|+.|++.|++|+|||+.+..++.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGH 427 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCe
Confidence 479999999999999999999999999999998776543
No 259
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.42 E-value=2.6e-07 Score=72.00 Aligned_cols=39 Identities=33% Similarity=0.412 Sum_probs=34.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHh-CCCCeEEEeccCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKR-LGVEPLVLEKSDG 39 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie~~~~ 39 (184)
|++.++|++|||+|++|+++|..|++ .|.+|+|+|++..
T Consensus 20 ~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 34467999999999999999999999 7999999999754
No 260
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.42 E-value=1.2e-07 Score=73.18 Aligned_cols=36 Identities=33% Similarity=0.396 Sum_probs=32.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
.+||++|||||.+|+.+|..|++ |.+|+|+|+....
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 36899999999999999999999 9999999998643
No 261
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.42 E-value=1.7e-06 Score=62.57 Aligned_cols=94 Identities=18% Similarity=0.270 Sum_probs=65.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~----------------------------------------~-- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA----------------------------------------S-- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS----------------------------------------C--
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc----------------------------------------c--
Confidence 5799999999999999999999999999998643200 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE-ecC--cEEEeeEEEecCC
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL-VDG--TIVKTKFLIGCDG 162 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~-~~g--~~~~a~~vI~a~G 162 (184)
..+.+.+.+. .+++++++++++++..++. ... +.+.. .+| +++.+|.||.|+|
T Consensus 194 ---------------------~~~~~~~~~~-~gV~v~~~~~v~~i~~~~~-~~~-v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2a87_A 194 ---------------------KIMLDRARNN-DKIRFLTNHTVVAVDGDTT-VTG-LRVRDTNTGAETTLPVTGVFVAIG 249 (335)
T ss_dssp ---------------------TTHHHHHHHC-TTEEEECSEEEEEEECSSS-CCE-EEEEEETTSCCEEECCSCEEECSC
T ss_pred ---------------------HHHHHHHhcc-CCcEEEeCceeEEEecCCc-EeE-EEEEEcCCCceEEeecCEEEEccC
Confidence 0122222222 2899999999999986541 112 33332 144 5789999999999
Q ss_pred cch
Q 030042 163 IHS 165 (184)
Q Consensus 163 ~~s 165 (184)
...
T Consensus 250 ~~p 252 (335)
T 2a87_A 250 HEP 252 (335)
T ss_dssp EEE
T ss_pred Ccc
Confidence 754
No 262
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.42 E-value=3e-07 Score=72.75 Aligned_cols=39 Identities=28% Similarity=0.502 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGT 43 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~ 43 (184)
.+||+|||||++|+.+|..|++.|.+|+|||+.+..++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCe
Confidence 579999999999999999999999999999998766543
No 263
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.42 E-value=2.1e-07 Score=72.73 Aligned_cols=34 Identities=29% Similarity=0.545 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
..+||+|||||++|+++|..|++.|.+|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999973
No 264
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.42 E-value=2.7e-07 Score=72.87 Aligned_cols=38 Identities=39% Similarity=0.710 Sum_probs=35.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
.+||+|||+|++|+++|+.|++.|++|+|+|+.+..++
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 47999999999999999999999999999999887765
No 265
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.39 E-value=3.7e-07 Score=73.74 Aligned_cols=38 Identities=39% Similarity=0.710 Sum_probs=35.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRG 42 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~ 42 (184)
.+||+|||+|++||++|+.|++.|++|+|+|+.+..++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 46999999999999999999999999999999887765
No 266
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.37 E-value=4.1e-06 Score=64.71 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+|+|||+|++|+-+|..|++.+.+|+++++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 4799999999999999999999999999999875
No 267
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.35 E-value=4.6e-07 Score=74.84 Aligned_cols=38 Identities=32% Similarity=0.537 Sum_probs=34.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccCCCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSDGLRG 42 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~~~~~ 42 (184)
.+||+|||||++|+++|..|++.|+ +|+|||+.+..++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc
Confidence 4699999999999999999999999 7999999876654
No 268
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.34 E-value=5.5e-06 Score=63.65 Aligned_cols=99 Identities=12% Similarity=0.085 Sum_probs=65.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||||.+|+-+|..|++.|.+|+++++..... .
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~-~------------------------------------------ 247 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR-G------------------------------------------ 247 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-T------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc-c------------------------------------------
Confidence 469999999999999999999999999999742110 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCC-CCcceEE--EEecC-c--EEEeeEEEe
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHD-GSSPVFI--HLVDG-T--IVKTKFLIG 159 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~-~~~~~~v--~~~~g-~--~~~a~~vI~ 159 (184)
.... -...+.+.|.+. +++++.+++++++...++. ... +.+ ...++ + ++.+|.||.
T Consensus 248 -----------~d~~----~~~~~~~~l~~~--GV~v~~~~~v~~v~~~~~~~~~~-~~v~~~~~~g~~~~~~~~D~vi~ 309 (519)
T 3qfa_A 248 -----------FDQD----MANKIGEHMEEH--GIKFIRQFVPIKVEQIEAGTPGR-LRVVAQSTNSEEIIEGEYNTVML 309 (519)
T ss_dssp -----------SCHH----HHHHHHHHHHHT--TCEEEESEEEEEEEEEECCTTCE-EEEEEEESSSSCEEEEEESEEEE
T ss_pred -----------CCHH----HHHHHHHHHHHC--CCEEEeCCeEEEEEEccCCCCce-EEEEEEECCCcEEEEEECCEEEE
Confidence 0000 012333444444 8999999888887764310 122 333 34455 3 567999999
Q ss_pred cCCcch
Q 030042 160 CDGIHS 165 (184)
Q Consensus 160 a~G~~s 165 (184)
|+|...
T Consensus 310 a~G~~p 315 (519)
T 3qfa_A 310 AIGRDA 315 (519)
T ss_dssp CSCEEE
T ss_pred ecCCcc
Confidence 999754
No 269
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.34 E-value=1e-06 Score=68.90 Aligned_cols=55 Identities=27% Similarity=0.340 Sum_probs=46.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDAL 60 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (184)
+||++|||+|+.|..+|..|++.|.+|++||+++..++...+..+. ....++...
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~-~l~~w~~~~ 62 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFS-GLLSWLKEY 62 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHH-HHHHHHHHT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHH-HHHHHHHHh
Confidence 6999999999999999999999999999999999988776665543 455555554
No 270
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.34 E-value=4.1e-07 Score=70.30 Aligned_cols=39 Identities=28% Similarity=0.311 Sum_probs=34.3
Q ss_pred CCccccEEEECCCHHHHHHHHHHHhC-CCCeEEEeccCCC
Q 030042 2 AMVEKDVVIIGAGIAGLATALALKRL-GVEPLVLEKSDGL 40 (184)
Q Consensus 2 ~~~~~dv~IiGgG~~Gl~~A~~l~~~-g~~v~vie~~~~~ 40 (184)
+.+++|++|||+|++|+++|+.|++. +.+|+|+|+....
T Consensus 10 ~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 10 SDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred ccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 33569999999999999999999998 8999999997543
No 271
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.33 E-value=3.7e-07 Score=70.89 Aligned_cols=36 Identities=36% Similarity=0.415 Sum_probs=33.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC-CCeEEEeccCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLG-VEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g-~~v~vie~~~~ 39 (184)
.+||++|||||.+|+++|..|++.+ .+|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999987 69999999765
No 272
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.32 E-value=4.9e-07 Score=70.22 Aligned_cols=35 Identities=34% Similarity=0.531 Sum_probs=32.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhC-CCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRL-GVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~-g~~v~vie~~~ 38 (184)
.+||++|||||.+|+++|..|++. +.+|+|||+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 78999999977
No 273
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.30 E-value=6.5e-06 Score=64.30 Aligned_cols=32 Identities=31% Similarity=0.379 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
.+++|||||.+|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999985
No 274
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.29 E-value=6.9e-07 Score=68.41 Aligned_cols=35 Identities=34% Similarity=0.472 Sum_probs=33.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.++|++|||+|++|+.+|+.|++.|.+|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 57899999999999999999999999999999876
No 275
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.27 E-value=6.5e-06 Score=62.98 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=35.0
Q ss_pred HHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecC----cEEEeeEEEecCCcc
Q 030042 109 LLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG----TIVKTKFLIGCDGIH 164 (184)
Q Consensus 109 l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g----~~~~a~~vI~a~G~~ 164 (184)
+.+.|.+. |++++.+++|++++.+. .. ..+...+| +++.+|.||.|+|..
T Consensus 278 ~~~~L~~~--GV~v~~~~~v~~v~~~~---~~-~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 278 AQSHLENT--SIKVHLRTAVAKVEEKQ---LL-AKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHT--TCEEETTEEEEEECSSE---EE-EEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHhc--ceeeecCceEEEEeCCc---eE-EEEEecCcccceeeeccCEEEEccCCc
Confidence 44444444 89999999999987653 11 33344555 368999999999963
No 276
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.26 E-value=1e-05 Score=62.22 Aligned_cols=93 Identities=19% Similarity=0.257 Sum_probs=66.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+|+|||||.+|+-+|..|++.|.+|+++++.+....
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------- 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------- 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------------------------------------------
Confidence 4799999999999999999999999999998653200
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe---cCc--EEEeeEEEec
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV---DGT--IVKTKFLIGC 160 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~---~g~--~~~a~~vI~a 160 (184)
. ..+.+.+.+ .++++++.+++++++..++ +.. ..+.+. +|+ ++.+|.||.|
T Consensus 393 --------------~------~~l~~~l~~-~~gV~v~~~~~v~~i~~~~--~~v-~~v~~~~~~~g~~~~i~~D~vi~a 448 (521)
T 1hyu_A 393 --------------D------QVLQDKVRS-LKNVDIILNAQTTEVKGDG--SKV-VGLEYRDRVSGDIHSVALAGIFVQ 448 (521)
T ss_dssp --------------C------HHHHHHHTT-CTTEEEECSEEEEEEEECS--SSE-EEEEEEETTTCCEEEEECSEEEEC
T ss_pred --------------C------HHHHHHHhc-CCCcEEEeCCEEEEEEcCC--CcE-EEEEEEeCCCCceEEEEcCEEEEC
Confidence 0 123333332 2388999999999998654 222 245444 353 6889999999
Q ss_pred CCcch
Q 030042 161 DGIHS 165 (184)
Q Consensus 161 ~G~~s 165 (184)
+|...
T Consensus 449 ~G~~p 453 (521)
T 1hyu_A 449 IGLLP 453 (521)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99654
No 277
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.26 E-value=8.1e-07 Score=67.24 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=34.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCC--CCeEEEeccCCCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLG--VEPLVLEKSDGLR 41 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g--~~v~vie~~~~~~ 41 (184)
..+||+|||||++|+.+|..|++.| .+|+|||+.+.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 3579999999999999999999988 8999999987664
No 278
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.21 E-value=5.8e-07 Score=69.62 Aligned_cols=35 Identities=40% Similarity=0.465 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKR-LGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie~~~~ 39 (184)
+||++|||||.+|+.+|..|++ .+.+|+|||+...
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 5899999999999999999998 6899999999754
No 279
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.21 E-value=5.7e-06 Score=62.33 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCC-eEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVE-PLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~-v~vie~~~~ 39 (184)
.+|+|||+|.+|+-+|..|++.+.+ |+++++.+.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 4799999999999999999999998 999998643
No 280
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.21 E-value=1.2e-06 Score=67.08 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=32.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.++|++|||+|++|+.+|+.|++.|.+|+|+|+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46899999999999999999999999999999875
No 281
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.18 E-value=8.8e-07 Score=70.05 Aligned_cols=36 Identities=25% Similarity=0.523 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC--------CCeEEEeccC-CC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLG--------VEPLVLEKSD-GL 40 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g--------~~v~vie~~~-~~ 40 (184)
..+|+|||||++||++|+.|++.| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999988 8999999987 66
No 282
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.17 E-value=2.1e-05 Score=56.15 Aligned_cols=34 Identities=29% Similarity=0.597 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+++|||||..|+-+|..|++.|.+|+++++...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 4799999999999999999999999999997543
No 283
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.15 E-value=1.8e-05 Score=56.00 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=68.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|++|+-+|..|++.| +|+++++.+..
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~--------------------------------------------- 175 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE--------------------------------------------- 175 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC---------------------------------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC---------------------------------------------
Confidence 57999999999999999999999 99999865320
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
+ ...+.+.+.+. +++++. ++++++..+ -.|.+.+|+++.+|.||.|+|...
T Consensus 176 ------------------~-~~~~~~~l~~~--gv~i~~-~~v~~i~~~-------~~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 176 ------------------P-DADQHALLAAR--GVRVET-TRIREIAGH-------ADVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp ------------------C-CHHHHHHHHHT--TCEEEC-SCEEEEETT-------EEEEETTSCEEEESEEEECCEEEC
T ss_pred ------------------C-CHHHHHHHHHC--CcEEEc-ceeeeeecC-------CeEEeCCCCEEEEEEEEEccCccc
Confidence 0 02344445444 788874 888888653 146778888999999999999753
Q ss_pred --HHHhhhCCC
Q 030042 166 --TVAWWLGLS 174 (184)
Q Consensus 166 --~~~~~~~~~ 174 (184)
.+.+.+++.
T Consensus 227 ~~~~~~~~g~~ 237 (297)
T 3fbs_A 227 TVDWIEKLGCA 237 (297)
T ss_dssp CCSCHHHHTCC
T ss_pred CchhHHhcCCc
Confidence 344445543
No 284
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.11 E-value=1.1e-05 Score=62.51 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+|+|||+|.+|+-+|..|++.+.+|+++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5799999999999999999999999999999875
No 285
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.10 E-value=1.8e-05 Score=59.99 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 4799999999999999999999999999998654
No 286
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.05 E-value=2.7e-05 Score=61.67 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=36.5
Q ss_pred HHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecC--cEEEeeEEEecCCcch
Q 030042 108 KLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDG--TIVKTKFLIGCDGIHS 165 (184)
Q Consensus 108 ~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g--~~~~a~~vI~a~G~~s 165 (184)
.+.+.|.+. |++++.+++++++..+ + +.+. .+| +++.+|.||.|+|...
T Consensus 578 ~~~~~l~~~--GV~v~~~~~v~~i~~~-----~-v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSR--GVKMIPGVSYQKIDDD-----G-LHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHT--TCEEECSCEEEEEETT-----E-EEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhc--CCEEEeCcEEEEEeCC-----e-EEEe-cCCeEEEEeCCEEEECCCccc
Confidence 344555554 8999999999998743 2 5554 566 5789999999999754
No 287
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.04 E-value=1.2e-05 Score=64.17 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=30.7
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIG--AGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiG--gG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+||| ||.+|+-+|..|++.|.+|+++++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799999 99999999999999999999999875
No 288
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.03 E-value=3.1e-05 Score=63.71 Aligned_cols=89 Identities=10% Similarity=0.143 Sum_probs=65.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCCc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTGA 85 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (184)
.+++|||+|+.|+-+|..|++.|.+|+|+|+.+... .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~----------------------~--------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS----------------------A--------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC----------------------H---------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc----------------------h---------------------
Confidence 479999999999999999999999999999865420 0
Q ss_pred eeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEecc-CCCCCcceEEEEec-------C--cEEEee
Q 030042 86 TQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQ-THDGSSPVFIHLVD-------G--TIVKTK 155 (184)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~-~~~~~~~~~v~~~~-------g--~~~~a~ 155 (184)
. .+.+.+. +++++.+++++++... + +.. ..|.+.+ | +++.+|
T Consensus 322 ---------------------~--~~~l~~~--GV~v~~~~~v~~i~~~~~--~~v-~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 322 ---------------------A--AAQAVAD--GVQVISGSVVVDTEADEN--GEL-SAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp ---------------------H--HHHHHHT--TCCEEETEEEEEEEECTT--SCE-EEEEEEEECTTCCEEEEEEEECS
T ss_pred ---------------------h--HHHHHhC--CeEEEeCCEeEEEeccCC--CCE-EEEEEEeccccCCCCceEEEEcC
Confidence 0 1223333 8999999999999863 2 122 2343332 4 579999
Q ss_pred EEEecCCcch
Q 030042 156 FLIGCDGIHS 165 (184)
Q Consensus 156 ~vI~a~G~~s 165 (184)
.||.|+|...
T Consensus 374 ~Vv~a~G~~P 383 (965)
T 2gag_A 374 VLAVAGGFNP 383 (965)
T ss_dssp EEEEECCEEE
T ss_pred EEEECCCcCc
Confidence 9999999754
No 289
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.75 E-value=0.0001 Score=55.75 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCC-eEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVE-PLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~-v~vie~~~~ 39 (184)
.+|+|||||.+|+-+|..+.+.|.+ |+++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 4799999999999999999999984 999988654
No 290
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.74 E-value=4.1e-05 Score=48.27 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+..++|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 291
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.73 E-value=0.0003 Score=58.39 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
+|+|||||.+|+-+|..+++.|. +|+++++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999997 899999864
No 292
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.72 E-value=8.8e-05 Score=53.72 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+|||+|.+|+-+|..|++.+ +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 57999999999999999999998 799998863
No 293
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.71 E-value=4.3e-05 Score=56.50 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=33.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGLR 41 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~~ 41 (184)
.+++|||||++|+-+|..|++.|.+|+++|+.+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 479999999999999999999999999999987653
No 294
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.67 E-value=8.5e-05 Score=47.51 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=31.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
....++|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45689999999999999999999999999999863
No 295
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.64 E-value=7.4e-05 Score=47.92 Aligned_cols=35 Identities=29% Similarity=0.337 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...++|+|+|..|..+|..|.+.|.+|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35799999999999999999999999999998653
No 296
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.63 E-value=0.00026 Score=53.52 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=28.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--------------------CC-CeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--------------------GV-EPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--------------------g~-~v~vie~~~~ 39 (184)
.+|+|||+|.+|+-+|..|++. |. +|+|+++...
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 4799999999999999999874 54 8999998654
No 297
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.60 E-value=0.00036 Score=52.42 Aligned_cols=49 Identities=12% Similarity=0.198 Sum_probs=35.0
Q ss_pred HHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEE--ec-----CcEEEeeEEEecCCc
Q 030042 107 KKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHL--VD-----GTIVKTKFLIGCDGI 163 (184)
Q Consensus 107 ~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~--~~-----g~~~~a~~vI~a~G~ 163 (184)
..+.+.+.+. +++++.+++|++++.+. +.+.. .+ +.++.+|.|+.|+|.
T Consensus 212 ~~~~~~l~~~--gI~~~~~~~v~~v~~~~------v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 212 GILTKGLKEE--GIEAYTNCKVTKVEDNK------MYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHT--TCEEECSEEEEEEETTE------EEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHC--CCEEEcCCEEEEEECCe------EEEEecccCCccccceEEEEeEEEEcCCC
Confidence 3455555555 89999999999997542 44443 23 457899999999984
No 298
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.60 E-value=8.2e-05 Score=46.89 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+-+++|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3479999999999999999999999999999975
No 299
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.60 E-value=0.00095 Score=50.52 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHH--------------------hCCC-CeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALK--------------------RLGV-EPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~--------------------~~g~-~v~vie~~~~ 39 (184)
.+++|||+|.+|+-+|..|+ +.+. +|+|+++...
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 47999999999999999998 5677 6999998754
No 300
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.60 E-value=0.0004 Score=51.62 Aligned_cols=47 Identities=13% Similarity=0.046 Sum_probs=36.3
Q ss_pred HHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch
Q 030042 109 LLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS 165 (184)
Q Consensus 109 l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s 165 (184)
+.+.+.+. +++++.+++|++++.+. |.+.+|+++.+|.||.|+|...
T Consensus 224 ~~~~l~~~--gV~~~~~~~v~~i~~~~--------v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 224 VASIYNQL--GIKLVHNFKIKEIREHE--------IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHH--TCEEECSCCEEEECSSE--------EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHC--CCEEEcCCceEEECCCe--------EEECCCCEEeeeEEEECCCCCc
Confidence 44444444 89999999999986432 6667888999999999999754
No 301
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.51 E-value=0.0013 Score=46.70 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=61.6
Q ss_pred ccEEEECCCHH-HHHHHHHHHhCCCCeEEEeccCCCCCccceeeecccHHHHHHHcCChHHHHhcCCCccceEEEecCCC
Q 030042 6 KDVVIIGAGIA-GLATALALKRLGVEPLVLEKSDGLRGTGAAISFAPNAWLALDALGVSHKLASIYPPVNRISVTNLGTG 84 (184)
Q Consensus 6 ~dv~IiGgG~~-Gl~~A~~l~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
.+++|||||.. ++.+|..+++.+.+|+++++.+..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~-------------------------------------------- 182 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL-------------------------------------------- 182 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC--------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccccc--------------------------------------------
Confidence 46788888865 577888888888889888764321
Q ss_pred ceeeeecCCCCCCCCCCeeeeHHHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcc
Q 030042 85 ATQETSLTGKFGDGSGPRFIHRKKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~ 164 (184)
...+.+.|.+. ++.++.+ .+..+...+ +.. ..|.+.+|+++.++.+|++.|..
T Consensus 183 ---------------------~~~~~~~l~~~--g~~~~~~-~v~~~~~~~--~~~-~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 183 ---------------------SQTIMDELSNK--NIPVITE-SIRTLQGEG--GYL-KKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp ---------------------CHHHHHHHHTT--TCCEECS-CEEEEESGG--GCC-CEEEETTSCEECCCEEEECCEEE
T ss_pred ---------------------hhhhhhhhhcc--ceeEeee-eEEEeecCC--Cee-eeeeccccceeeecceeeeeccc
Confidence 01233333333 5566554 455665443 233 56888999889989888888764
Q ss_pred h--HHHhhhCCC
Q 030042 165 S--TVAWWLGLS 174 (184)
Q Consensus 165 s--~~~~~~~~~ 174 (184)
. .+.+.+++.
T Consensus 236 ~~~~~~~~~g~~ 247 (304)
T 4fk1_A 236 RPNQFIEQLGCE 247 (304)
T ss_dssp CSSCHHHHTTCC
T ss_pred cCChhhhhcCeE
Confidence 3 244455543
No 302
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.48 E-value=0.00013 Score=45.65 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+++|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999854
No 303
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.47 E-value=0.00012 Score=44.28 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-CCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLG-VEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g-~~v~vie~~~ 38 (184)
...++|+|+|..|..++..|.+.| .+|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999999864
No 304
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.45 E-value=0.00043 Score=51.87 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=36.0
Q ss_pred HHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEe--cCcEEEeeEEEecCCcc
Q 030042 107 KKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLV--DGTIVKTKFLIGCDGIH 164 (184)
Q Consensus 107 ~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~--~g~~~~a~~vI~a~G~~ 164 (184)
..+.+.+.+. +++++++++|++++.++ +.+... +++++.+|.||.|+|..
T Consensus 204 ~~l~~~l~~~--GV~i~~~~~v~~v~~~~------v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 204 RLVEDLFAER--NIDWIANVAVKAIEPDK------VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHT--TCEEECSCEEEEECSSE------EEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHC--CCEEEeCCEEEEEeCCe------EEEEecCCCceEEeeeEEEECCCCc
Confidence 3455555555 89999999999986542 444432 25689999999999964
No 305
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.43 E-value=0.00023 Score=44.67 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999999853
No 306
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.43 E-value=0.00017 Score=51.53 Aligned_cols=38 Identities=21% Similarity=0.448 Sum_probs=32.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|++....|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 44334579999999999999999999999999999864
No 307
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.39 E-value=0.00018 Score=52.55 Aligned_cols=38 Identities=32% Similarity=0.392 Sum_probs=32.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|++...+|.|||+|..|.++|..|++.|.+|.++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45445689999999999999999999999999999864
No 308
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.37 E-value=0.00018 Score=51.40 Aligned_cols=35 Identities=20% Similarity=0.403 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
.+++|||||+.|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 47999999999999999999999999999987654
No 309
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.36 E-value=0.0015 Score=50.41 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..|+|||+|.+|+-+|..|++.+.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 4799999999999999999999999999998654
No 310
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.33 E-value=0.00021 Score=54.35 Aligned_cols=38 Identities=26% Similarity=0.381 Sum_probs=32.4
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|+|....|.|||+|..|...|..|++.|++|+++|++.
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 66655689999999999999999999999999999864
No 311
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.30 E-value=0.00024 Score=51.03 Aligned_cols=38 Identities=26% Similarity=0.393 Sum_probs=31.0
Q ss_pred CCCc-cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMV-EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~-~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|+.. ...|.|||+|..|...|..+++.|++|+++|.++
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5543 3579999999999999999999999999999865
No 312
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.30 E-value=0.00032 Score=50.34 Aligned_cols=37 Identities=30% Similarity=0.537 Sum_probs=33.7
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCC-CeEEEecc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKS 37 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~ 37 (184)
|+|+..+|.|||+|..|..+|+.|++.|+ +++++|..
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 66666789999999999999999999999 99999987
No 313
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.23 E-value=0.0023 Score=48.90 Aligned_cols=58 Identities=14% Similarity=0.013 Sum_probs=44.2
Q ss_pred HHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcch--HHHhhhCCC
Q 030042 111 QTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHS--TVAWWLGLS 174 (184)
Q Consensus 111 ~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s--~~~~~~~~~ 174 (184)
+.+.+. |++++.+++|+++...+ .. ..+.+.+|+++.+|.||.|+|..+ .+.+.+++.
T Consensus 265 ~~l~~~--GV~v~~~~~v~~i~~~~---~v-~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERW--GIDYVHIPNVKRVEGNE---KV-ERVIDMNNHEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHHHH--TCEEEECSSEEEEECSS---SC-CEEEETTCCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhC--CcEEEeCCeeEEEecCC---ce-EEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 444444 89999999999998653 33 556788888999999999999865 356667654
No 314
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.23 E-value=0.0004 Score=45.67 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRL-GVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~-g~~v~vie~~~ 38 (184)
-.++|+|+|..|..+|..|.+. |.+|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999864
No 315
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.12 E-value=0.00046 Score=49.66 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998653
No 316
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.12 E-value=0.00048 Score=48.71 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|.|||+|..|...|..|++.|++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3589999999999999999999999999999865
No 317
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.09 E-value=0.00067 Score=49.16 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
..+|+|||+|..|.++|..|++.|.+|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999985
No 318
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.05 E-value=0.00054 Score=46.45 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999865
No 319
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.05 E-value=0.0051 Score=47.08 Aligned_cols=34 Identities=9% Similarity=0.279 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~~ 39 (184)
.+|+|||+|-+|.-++..|+++ +.+|.++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 4799999999999999999875 668999888754
No 320
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.02 E-value=0.00072 Score=48.66 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+|||+|..|.++|..|++.|.+|++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 379999999999999999999999999999864
No 321
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.00 E-value=0.00081 Score=48.67 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
.+|+|||+|..|..+|..|++.|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999875
No 322
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.99 E-value=0.00085 Score=50.67 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|.|||.|.+|+++|..|.++|.+|.+.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3589999999999999999999999999999854
No 323
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.98 E-value=0.00083 Score=48.31 Aligned_cols=37 Identities=16% Similarity=0.383 Sum_probs=32.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
|++ ...|.|||+|..|..+|..|++.|+ +|+++|++.
T Consensus 1 M~~-~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIE-RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCC-CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCC-CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 663 3589999999999999999999998 999999865
No 324
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.96 E-value=0.0007 Score=51.09 Aligned_cols=32 Identities=25% Similarity=0.575 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|.|||.|..|+.+|..|++.|.+|+++|+++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 325
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.94 E-value=0.00074 Score=48.24 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||+|..|..+|..|++.|.+|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999853
No 326
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.94 E-value=0.0008 Score=48.24 Aligned_cols=33 Identities=33% Similarity=0.470 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+|||+|..|.++|..|++.|.+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 379999999999999999999999999999864
No 327
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.90 E-value=0.0011 Score=47.12 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+|||+|..|.++|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 379999999999999999999999999999873
No 328
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.90 E-value=0.0012 Score=47.17 Aligned_cols=34 Identities=32% Similarity=0.419 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..+|.|||.|..|..+|..|.+.|++|+++|+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999865
No 329
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.89 E-value=0.00099 Score=47.40 Aligned_cols=35 Identities=17% Similarity=0.088 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998764
No 330
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.86 E-value=0.0015 Score=44.51 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
...|+|||||..|...|..|.+.|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 458999999999999999999999999999974
No 331
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.86 E-value=0.001 Score=47.51 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..+|.|||.|..|..+|..|++.|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4579999999999999999999999999999864
No 332
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.84 E-value=0.00075 Score=48.31 Aligned_cols=36 Identities=19% Similarity=0.198 Sum_probs=29.9
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhC-----C-CCeEEEec
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRL-----G-VEPLVLEK 36 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~-----g-~~v~vie~ 36 (184)
|+.+..+|.|||+|..|.++|..|++. | .+|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 443335799999999999999999998 9 89999987
No 333
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.84 E-value=0.001 Score=48.45 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..+|.|||+|..|..+|..|++.|.+|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999999999999999999999999999864
No 334
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.84 E-value=0.0013 Score=47.33 Aligned_cols=38 Identities=29% Similarity=0.460 Sum_probs=30.3
Q ss_pred CCC--ccccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 1 MAM--VEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 1 m~~--~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
|+| +..+|+|||+|..|.++|+.|+..+. +++++|.+.
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 454 34689999999999999999999887 899999764
No 335
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.81 E-value=0.0015 Score=46.97 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
...|.|||.|..|.++|..|++.|. +|.++|+++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3589999999999999999999999 899999864
No 336
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.79 E-value=0.0012 Score=46.43 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|+|||||..|+..|..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4579999999999999999999999999999864
No 337
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.78 E-value=0.00083 Score=45.64 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEE-EeccCC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLV-LEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~v-ie~~~~ 39 (184)
++.+|.|||+|..|.++|..|++.|.+|++ +++++.
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 345899999999999999999999999998 787653
No 338
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.75 E-value=0.0023 Score=45.85 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|.|||+|..|...|..|++.|.+|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998653
No 339
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.74 E-value=0.0016 Score=46.99 Aligned_cols=38 Identities=34% Similarity=0.523 Sum_probs=32.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
|++...+|.|||+|..|.++|+.|++.|. +++++|.+.
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 65455689999999999999999999887 799999753
No 340
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.74 E-value=0.0017 Score=45.75 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+|.|||+|..|..+|..|++.|.+|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998754
No 341
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.71 E-value=0.0021 Score=43.26 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..|.|||+|..|.++|..|++.|.+|+++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4799999999999999999999999999998754
No 342
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.71 E-value=0.002 Score=46.41 Aligned_cols=37 Identities=19% Similarity=0.405 Sum_probs=32.2
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccCC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSDG 39 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~~ 39 (184)
|+..+|.|||+|..|.++|+.|+..++ +++++|....
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 455689999999999999999999988 9999998653
No 343
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.71 E-value=0.00092 Score=49.00 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|.|||+|..|..+|..|++.|.+|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 344
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.67 E-value=0.0024 Score=45.99 Aligned_cols=34 Identities=15% Similarity=0.399 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
..+|+|||+|..|..+|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4589999999999999999999998 899999864
No 345
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.63 E-value=0.0019 Score=44.83 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
..+|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3589999999999999999999998 799999875
No 346
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.63 E-value=0.0015 Score=46.98 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC-CCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLG-VEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g-~~v~vie~~~ 38 (184)
.+|.|||.|..|..+|..|++.| .+|+++|+.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999975
No 347
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.63 E-value=0.0021 Score=48.51 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999998754
No 348
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.61 E-value=0.0024 Score=44.14 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|.|||.|..|.++|..|++.|.+|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46899999999999999999999999999998653
No 349
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.60 E-value=0.0023 Score=47.71 Aligned_cols=34 Identities=32% Similarity=0.373 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3479999999999999999999999999999875
No 350
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.58 E-value=0.0025 Score=45.77 Aligned_cols=33 Identities=27% Similarity=0.471 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
.+|+|||+|..|..+|..|++.|. +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999998 899999864
No 351
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.58 E-value=0.002 Score=49.03 Aligned_cols=33 Identities=30% Similarity=0.568 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||.|..|+.+|..|++.|.+|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 352
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.58 E-value=0.0022 Score=48.64 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999864
No 353
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.58 E-value=0.0023 Score=48.58 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CC-CeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRL-GV-EPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~-g~-~v~vie~~~~ 39 (184)
..+|.|||.|..|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35899999999999999999999 99 9999999865
No 354
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.57 E-value=0.0024 Score=47.31 Aligned_cols=35 Identities=26% Similarity=0.478 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|+|||+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35899999999999999999999999999998764
No 355
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.57 E-value=0.0021 Score=45.61 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+..|.|||.|..|...|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 458999999999999999999 999999999864
No 356
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.57 E-value=0.0059 Score=46.22 Aligned_cols=40 Identities=35% Similarity=0.709 Sum_probs=35.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccCCCCCc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSDGLRGT 43 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~~~~~~ 43 (184)
+.+||+|||+|++|+++|+.|++.|. +|+|+|+.+.+++.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 43 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCc
Confidence 46899999999999999999999998 89999998877654
No 357
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.56 E-value=0.0027 Score=47.76 Aligned_cols=36 Identities=36% Similarity=0.506 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
...|.|||.|.+|+++|..|+++|.+|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999986543
No 358
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.56 E-value=0.0024 Score=48.63 Aligned_cols=35 Identities=17% Similarity=0.382 Sum_probs=31.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+.+|.|||.|..|..+|..|++.|.+|.++++.+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999864
No 359
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.56 E-value=0.0031 Score=47.97 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+.+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44689999999999999999999999999999875
No 360
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.56 E-value=0.002 Score=46.22 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~ 37 (184)
..+|.|||.|..|..+|..|++.|+ +|+++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4589999999999999999999999 99999985
No 361
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.55 E-value=0.0029 Score=44.72 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.|||+ |..|..+|..|.+.|.+|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999853
No 362
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.52 E-value=0.0034 Score=45.22 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=31.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
|+...|.|||+|..|.++|+.|++.++ +++++|...
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345689999999999999999999888 999999865
No 363
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.52 E-value=0.0012 Score=49.93 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+|+|+|-.|..+|..|..+|.+|+|+|+++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 379999999999999999999999999999875
No 364
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.52 E-value=0.0044 Score=43.54 Aligned_cols=37 Identities=32% Similarity=0.417 Sum_probs=32.1
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
|+| ..|+|.|+|..|..++..|.+.|.+|+++.|...
T Consensus 1 M~~--~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 1 MSL--SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp -CC--CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCC--CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 554 4799999999999999999999999999998743
No 365
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.51 E-value=0.0034 Score=44.95 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+|.|||.|..|..+|..|++.|++|+++|+.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 366
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.49 E-value=0.0029 Score=45.22 Aligned_cols=32 Identities=31% Similarity=0.392 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|+|||+|..|.+.|..|+ .|.+|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 37999999999999999999 999999999864
No 367
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.48 E-value=0.0022 Score=45.58 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=31.0
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|++ ..+|.|||+|..|...|..|.+.|.+|+++++++
T Consensus 1 M~~-~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEK-SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ----CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCC-CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 553 4589999999999999999999999999999864
No 368
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.48 E-value=0.0041 Score=43.88 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC---CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV---EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~---~v~vie~~~ 38 (184)
+..|.|||+|..|.++|..|.+.|+ +|.++|+++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4579999999999999999999998 899999865
No 369
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.47 E-value=0.0013 Score=41.53 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..++|||+|..|..+|..|.+.|.+|+++++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999999864
No 370
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.46 E-value=0.0032 Score=45.52 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..+|.|||+|..|.++|..|++.|.+|+++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999853
No 371
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.45 E-value=0.0028 Score=44.92 Aligned_cols=34 Identities=32% Similarity=0.463 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5689999999999999999999998 799999875
No 372
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.44 E-value=0.0026 Score=46.75 Aligned_cols=35 Identities=26% Similarity=0.466 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|+|||+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999998753
No 373
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.43 E-value=0.004 Score=44.98 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
.+|.|||+|..|..+|..|++.|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999998 999999875
No 374
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.43 E-value=0.0029 Score=46.25 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999999999999999999999999999864
No 375
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.43 E-value=0.0036 Score=43.54 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC----CCeEEEeccCCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLG----VEPLVLEKSDGL 40 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g----~~v~vie~~~~~ 40 (184)
..+|.|||+|..|...|..|.+.| .+|.++++.+..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 347999999999999999999998 689999987653
No 376
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.41 E-value=0.0039 Score=46.99 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..+.|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999999765
No 377
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.39 E-value=0.0044 Score=45.30 Aligned_cols=34 Identities=21% Similarity=0.510 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..|+|+|||..|..+|+.+++.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3799999999999999999999999999998654
No 378
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.35 E-value=0.0058 Score=41.28 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..+.|||+|..|...|..|.+.|.+|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 379
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.33 E-value=0.0029 Score=44.93 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||+|..|..+|..|.+.|.+|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 379999999999999999999999999999864
No 380
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.29 E-value=0.0048 Score=43.58 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998754
No 381
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.28 E-value=0.0036 Score=44.22 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+|.|||.|..|..+|..|++.|++|+++|+++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 799999999999999999999999999998754
No 382
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.27 E-value=0.0046 Score=44.19 Aligned_cols=32 Identities=28% Similarity=0.553 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
+|+|||+|..|..+|..|++.|. +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 68999999999999999999998 899999864
No 383
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.26 E-value=0.0046 Score=44.74 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|-.|..+|..|++.|+ +++++|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999998 699999865
No 384
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.24 E-value=0.0045 Score=44.49 Aligned_cols=31 Identities=32% Similarity=0.439 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
.+|+|||+|..|.++|..|++.|.+|+++ ++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 47999999999999999999999999999 64
No 385
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.22 E-value=0.0053 Score=46.65 Aligned_cols=34 Identities=15% Similarity=0.349 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+.+|.|||.|..|..+|..|++.|.+|.++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4589999999999999999999999999999864
No 386
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.21 E-value=0.0044 Score=46.43 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||.|..|+.+|..|++ |.+|+++|+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 479999999999999999998 99999999865
No 387
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.21 E-value=0.0033 Score=47.71 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~ 38 (184)
.+|.|||.|..|+.+|..|++. |.+|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4899999999999999999998 78999999864
No 388
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.21 E-value=0.0048 Score=45.19 Aligned_cols=33 Identities=27% Similarity=0.448 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|+|+|+|.+|+.++..|+..|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 389
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.21 E-value=0.0037 Score=45.08 Aligned_cols=30 Identities=33% Similarity=0.368 Sum_probs=28.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEec
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEK 36 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~ 36 (184)
+|.|||+|..|..+|..|++.|.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 390
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.20 E-value=0.0041 Score=43.16 Aligned_cols=34 Identities=35% Similarity=0.524 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999998 689998865
No 391
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.20 E-value=0.004 Score=46.76 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+..++|||.|..||.+|..|++.|++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999764
No 392
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.20 E-value=0.0027 Score=46.25 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-------CCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLG-------VEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g-------~~v~vie~~~~ 39 (184)
..+|.|||+|..|.++|..|++.| .+|.++++.+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 347999999999999999999998 89999998654
No 393
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.19 E-value=0.0033 Score=47.23 Aligned_cols=32 Identities=28% Similarity=0.360 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|.|||.|..|+.+|..|++.|.+|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 394
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.0067 Score=46.39 Aligned_cols=34 Identities=18% Similarity=0.279 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 395
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.19 E-value=0.0047 Score=41.78 Aligned_cols=38 Identities=29% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
|++ +..|+|.|| |..|..++..|.++|.+|+++.|.+.
T Consensus 1 M~~-m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEK-VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --C-CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 653 357999995 99999999999999999999998754
No 396
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.19 E-value=0.0058 Score=43.91 Aligned_cols=38 Identities=32% Similarity=0.545 Sum_probs=31.6
Q ss_pred CCCc-cccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 1 MAMV-EKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 1 m~~~-~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
|++. ...|+|||+|..|.++|+.|++.+. +++++|.+.
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 5543 3589999999999999999988775 799999864
No 397
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.18 E-value=0.0051 Score=45.73 Aligned_cols=34 Identities=35% Similarity=0.498 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..|+|||+|.+|+.+|..|...|.+|+++|+...
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998653
No 398
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.18 E-value=0.0039 Score=44.35 Aligned_cols=33 Identities=27% Similarity=0.345 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||.|..|..+|..|++.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 399
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.17 E-value=0.0053 Score=44.15 Aligned_cols=35 Identities=26% Similarity=0.477 Sum_probs=30.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHhCCC--CeEEEecc
Q 030042 3 MVEKDVVIIGAGIAGLATALALKRLGV--EPLVLEKS 37 (184)
Q Consensus 3 ~~~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~ 37 (184)
|+..+|+|||+|..|.++|+.|+..+. ++.++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 345699999999999999999998875 79999865
No 400
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.16 E-value=0.006 Score=43.90 Aligned_cols=34 Identities=24% Similarity=0.224 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC----CCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLG----VEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g----~~v~vie~~~ 38 (184)
..+|.|||+|..|.++|..|.+.| .+|+++++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 347999999999999999999999 7899999865
No 401
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.13 E-value=0.0047 Score=44.40 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||.|..|..+|..|++.|.+|+++|+.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999865
No 402
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.12 E-value=0.0079 Score=43.37 Aligned_cols=35 Identities=26% Similarity=0.141 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHH-HHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLA-TALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~-~A~~l~~~g~~v~vie~~~~ 39 (184)
...|.|||.|.+|++ +|..|.++|.+|.+.|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 357999999999996 88999999999999998653
No 403
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.11 E-value=0.0041 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=27.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+|-+||-|..|..+|..|.+.|++|+++|+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3699999999999999999999999999998754
No 404
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.09 E-value=0.0042 Score=47.31 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRL--GVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~ 38 (184)
.+|.|||.|..|+.+|..|++. |.+|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 78999999864
No 405
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.09 E-value=0.0077 Score=40.39 Aligned_cols=32 Identities=34% Similarity=0.494 Sum_probs=29.5
Q ss_pred cEEEEC-CCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIG-AGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiG-gG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+++||| +|..|..+|..|.+.|.+|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999864
No 406
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.09 E-value=0.0064 Score=44.93 Aligned_cols=35 Identities=29% Similarity=0.504 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|+|+|+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998754
No 407
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=96.09 E-value=0.0014 Score=44.81 Aligned_cols=37 Identities=24% Similarity=0.201 Sum_probs=31.6
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
|.....+|.|||.|..|.++|..|++.|++|+.+++.
T Consensus 2 ~~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp -CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4334458999999999999999999999999999874
No 408
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.07 E-value=0.0074 Score=43.83 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.|||.|..|.++|..|.+.|.+|.++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999865
No 409
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.07 E-value=0.009 Score=41.89 Aligned_cols=34 Identities=24% Similarity=0.301 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|+|+|.+|.++|..|++.|.+|++++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998863
No 410
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.07 E-value=0.0076 Score=43.15 Aligned_cols=33 Identities=33% Similarity=0.475 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
.+|+|||+|..|..+|..|+..|. +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999986 899999764
No 411
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.07 E-value=0.01 Score=42.17 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=30.4
Q ss_pred ccEEEEC-CCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIG-AGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiG-gG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.||| .|..|.++|..|++.|.+|.++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3799999 99999999999999999999999864
No 412
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.05 E-value=0.01 Score=39.28 Aligned_cols=34 Identities=35% Similarity=0.494 Sum_probs=30.8
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..++|.|+ |..|..++..|.++|.+|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 47999998 99999999999999999999998653
No 413
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.05 E-value=0.008 Score=42.10 Aligned_cols=34 Identities=35% Similarity=0.513 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..++|||+|-+|.++|+.|.+.|.+|+|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999988999998754
No 414
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.05 E-value=0.0032 Score=43.04 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...++|+|+|..|..+|..|.+.|. |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3479999999999999999999999 999998753
No 415
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.05 E-value=0.006 Score=44.54 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|..|..+|..|++.|. +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4689999999999999999999998 799999865
No 416
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.02 E-value=0.0083 Score=44.15 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=31.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
....|+|+|+|.+|..+|..|...|. +|.++|+.-
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35689999999999999999999999 899999863
No 417
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.01 E-value=0.005 Score=45.77 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|.|||.|..|+.+|..|++ |.+|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 418
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.01 E-value=0.0089 Score=41.91 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|+|.|+|..|..++..|.++|.+|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999999865
No 419
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=96.00 E-value=0.0056 Score=44.25 Aligned_cols=37 Identities=22% Similarity=0.192 Sum_probs=30.1
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCC-------CeEEEecc
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGV-------EPLVLEKS 37 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~-------~v~vie~~ 37 (184)
|+++..+|+|+|+ |..|..++..|...+. ++.++|..
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 5544568999998 9999999999998875 79999876
No 420
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.99 E-value=0.011 Score=43.47 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|+|+|+|..|..++..+.+.|++|+++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 45799999999999999999999999999997643
No 421
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.98 E-value=0.008 Score=45.70 Aligned_cols=35 Identities=34% Similarity=0.594 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
.+++|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 47999999999999999999999999999997754
No 422
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.97 E-value=0.0072 Score=44.38 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 423
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.97 E-value=0.0067 Score=45.51 Aligned_cols=56 Identities=20% Similarity=0.157 Sum_probs=41.6
Q ss_pred HHHHHHHHhhCC--CCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH
Q 030042 107 KKLLQTLADELP--NGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 107 ~~l~~~l~~~~~--~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
..+.+.|.+.+. |++++++++|+++...+ .. +.....+|+++.||.||.|+|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~---~~-v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN---GK-VVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET---TE-EEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC---CE-EEEEEECCeEEECCEEEECCCCCcc
Confidence 356666665543 88999999999998765 33 3333357788999999999998864
No 424
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.96 E-value=0.0087 Score=41.29 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC----CeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV----EPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~----~v~vie~~~ 38 (184)
..|.|||+|..|...|..|.+.|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999864
No 425
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.96 E-value=0.01 Score=40.39 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.0
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|+|.|| |..|..++..|.++|.+|+++.|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 457999998 9999999999999999999999865
No 426
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.94 E-value=0.0085 Score=42.90 Aligned_cols=32 Identities=31% Similarity=0.500 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRL--GVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~ 38 (184)
+|+|||+|..|..+|..|++. +.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999985 67899999875
No 427
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.94 E-value=0.0082 Score=48.07 Aligned_cols=33 Identities=33% Similarity=0.420 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999865
No 428
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.93 E-value=0.0076 Score=41.99 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCC-eEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVE-PLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~-v~vie~~~ 38 (184)
..|.|||+|..|...|..|++.|.+ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999998 88998854
No 429
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.92 E-value=0.0073 Score=42.38 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.|.|||+|..|.++|..|.+.|.+|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998764
No 430
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.91 E-value=0.0098 Score=43.69 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=31.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-CeEEEecc
Q 030042 4 VEKDVVIIGAGIAGLATALALKRLGV-EPLVLEKS 37 (184)
Q Consensus 4 ~~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~ 37 (184)
+...|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999998 79999986
No 431
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.90 E-value=0.0073 Score=44.41 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC-------CCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLG-------VEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g-------~~v~vie~~~~ 39 (184)
.+|.|||+|..|.++|..|++.| .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 37999999999999999999998 89999998654
No 432
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.90 E-value=0.0071 Score=43.50 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
+|.|||+|..|.++|..|++.|. +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999998 899999863
No 433
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.89 E-value=0.013 Score=43.26 Aligned_cols=33 Identities=39% Similarity=0.537 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|+|+|+|..|..+|..+.+.|++|+++|..+
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999764
No 434
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.87 E-value=0.012 Score=45.76 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
.+++|+|+|..|..+|..|.+.|.+|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 47999999999999999999999999999998754
No 435
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.85 E-value=0.012 Score=43.97 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|+|+|+|..|..++..+.+.|++|.++|..+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4579999999999999999999999999998754
No 436
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.85 E-value=0.0088 Score=44.06 Aligned_cols=34 Identities=38% Similarity=0.505 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|+|+|+|..|..+|..++..|.+|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 437
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.84 E-value=0.012 Score=41.46 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccCC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~~ 39 (184)
...++|+|+|-+|.++|..|.+.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 3579999999999999999999998 8999998653
No 438
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.82 E-value=0.012 Score=44.88 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||.|..|..+|..|++.|.+|.++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 439
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.81 E-value=0.0095 Score=42.14 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|.|||.|..|..+|..|.+.|.+|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999864
No 440
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=95.80 E-value=0.011 Score=44.34 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4689999999999999999999998 799999764
No 441
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.80 E-value=0.0074 Score=41.94 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-CCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLG-VEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g-~~v~vie~~~ 38 (184)
.|.|||+|..|...|..|++.| .+|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 8999999864
No 442
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.79 E-value=0.0098 Score=41.79 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
.|.|||+|..|.++|..|++.|. +|+++|+++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899998864
No 443
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.79 E-value=0.024 Score=42.11 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=41.9
Q ss_pred HHHHHHHHhhCCCCeeeeCceEEEEeccCCCCCcceEEEEecCcEEEeeEEEecCCcchH
Q 030042 107 KKLLQTLADELPNGTIHFSSKIAAIDSQTHDGSSPVFIHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 107 ~~l~~~l~~~~~~~~i~~~~~v~~~~~~~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
..+.+.+.+.. +.+++++++|+++...+ +. +.|.+.+|+ +.||.||.|++....
T Consensus 206 ~~l~~~l~~~l-~~~v~~~~~V~~i~~~~---~~-v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 206 QAMFEHLNATL-EHPAERNVDITRITRED---GK-VHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHHS-SSCCBCSCCEEEEECCT---TC-EEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHHhh-cceEEcCCEEEEEEEEC---CE-EEEEECCCe-EEcCEEEECCCHHHH
Confidence 45666666665 45789999999998765 34 778888875 899999999998643
No 444
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.78 E-value=0.01 Score=42.18 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...++|||+|.+|.++|..|.+.|. +|+|++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999864
No 445
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.76 E-value=0.015 Score=40.34 Aligned_cols=32 Identities=38% Similarity=0.524 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
.++|||+|-+|.++++.|.+.|. +|+|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899999864
No 446
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.75 E-value=0.0084 Score=43.63 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 5689999999999999999999999 799999765
No 447
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.74 E-value=0.008 Score=43.50 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=31.6
Q ss_pred ccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 4 VEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
+...|+|.|| |..|..++..|.++|.+|++++|...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4468999996 99999999999999999999998543
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.74 E-value=0.01 Score=41.78 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.|.|||+|..|...|..|.+ |.+|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999864
No 449
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.74 E-value=0.013 Score=46.59 Aligned_cols=35 Identities=23% Similarity=0.195 Sum_probs=31.7
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhCCCCeEEEeccCCC
Q 030042 6 KDVVIIG--AGIAGLATALALKRLGVEPLVLEKSDGL 40 (184)
Q Consensus 6 ~dv~IiG--gG~~Gl~~A~~l~~~g~~v~vie~~~~~ 40 (184)
.+|+||| +|.+|+-+|..|++.|.+|+++++.+..
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 3699999 9999999999999999999999987654
No 450
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.73 E-value=0.012 Score=44.63 Aligned_cols=34 Identities=35% Similarity=0.391 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|+|+|..|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999854
No 451
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.72 E-value=0.016 Score=42.15 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=29.3
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCC--CeEEEecc
Q 030042 5 EKDVVIIGA-GIAGLATALALKRLGV--EPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGg-G~~Gl~~A~~l~~~g~--~v~vie~~ 37 (184)
..+|+|||+ |..|.++|+.+...|. +++++|.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 458999997 9999999999998885 79999975
No 452
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.72 E-value=0.011 Score=44.67 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~ 37 (184)
...|+|||||..|...+..|.+.|.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 457999999999999999999999999999975
No 453
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.72 E-value=0.0089 Score=42.21 Aligned_cols=34 Identities=35% Similarity=0.490 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRL--GVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~--g~~v~vie~~~ 38 (184)
...|.|||+|..|..+|..|++. +.+|.++|+++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 35799999999999999999987 56899998753
No 454
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.71 E-value=0.015 Score=41.28 Aligned_cols=35 Identities=31% Similarity=0.345 Sum_probs=31.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|+|.|| |..|..++..|.++|.+|++++|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 458999999 99999999999999999999998654
No 455
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.69 E-value=0.01 Score=46.08 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999998 799999764
No 456
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.69 E-value=0.0074 Score=44.81 Aligned_cols=29 Identities=28% Similarity=0.252 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHHHh-CCCCeEEEe
Q 030042 7 DVVIIGAGIAGLATALALKR-LGVEPLVLE 35 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~-~g~~v~vie 35 (184)
+|.|||+|..|.++|..|++ .|.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 79999999999999999988 499999999
No 457
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.68 E-value=0.011 Score=44.98 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+|.|||.|..|..+|..|++.|.+|.++++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999854
No 458
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.67 E-value=0.0097 Score=42.54 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCC--CCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLG--VEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g--~~v~vie~~~ 38 (184)
+|+|||+|..|.++|..|++.| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999988 5899999864
No 459
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.66 E-value=0.011 Score=46.04 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...|+|||+|-.|..+|..|++.|+ +++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4689999999999999999999998 799999875
No 460
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.65 E-value=0.01 Score=41.60 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|+|+|-+|.++|..|++.|.+|+|++|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3479999999999999999999999999999864
No 461
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.64 E-value=0.009 Score=45.06 Aligned_cols=55 Identities=18% Similarity=0.120 Sum_probs=41.1
Q ss_pred HHHHHHHhhCC--CCeeeeCceEEEEecc--CCCCCcceEEEEecCcEEEeeEEEecCCcchH
Q 030042 108 KLLQTLADELP--NGTIHFSSKIAAIDSQ--THDGSSPVFIHLVDGTIVKTKFLIGCDGIHST 166 (184)
Q Consensus 108 ~l~~~l~~~~~--~~~i~~~~~v~~~~~~--~~~~~~~~~v~~~~g~~~~a~~vI~a~G~~s~ 166 (184)
.+.+.|.+.+. |++++++++|+++... + +.. +.|.+ +|+++.||.||.|+|.++.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~-~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKF-EGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEE-EEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeE-EEEEE-CCeEEECCEEEECCCccch
Confidence 55566655543 8899999999999876 4 232 45655 5778999999999998863
No 462
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=95.63 E-value=0.017 Score=40.48 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=31.0
Q ss_pred CC-CccccEEEECC---CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MA-MVEKDVVIIGA---GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~-~~~~dv~IiGg---G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|+ +....++|.|| |-.|..+|..|+++|.+|++++++.
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 55 33456899997 5889999999999999999999875
No 463
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.61 E-value=0.023 Score=41.36 Aligned_cols=39 Identities=23% Similarity=0.243 Sum_probs=32.1
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
|+|....|+|.|+ |..|..++..|.++|.+|+++.|+..
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 40 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK 40 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 6654567999996 99999999999999999999998654
No 464
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.61 E-value=0.017 Score=38.64 Aligned_cols=32 Identities=31% Similarity=0.342 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.|+|.|| |..|..++..|.++|.+|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4899996 9999999999999999999999874
No 465
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.60 E-value=0.012 Score=40.12 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=31.1
Q ss_pred ccccEEEEC-CCHHHHHHHHHHHhCC-CCeEEEeccCC
Q 030042 4 VEKDVVIIG-AGIAGLATALALKRLG-VEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiG-gG~~Gl~~A~~l~~~g-~~v~vie~~~~ 39 (184)
++..|+|.| +|..|..++..|.++| .+|+++.|+..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh
Confidence 345799999 5999999999999999 89999998753
No 466
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.59 E-value=0.01 Score=47.40 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999865
No 467
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.59 E-value=0.024 Score=38.16 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=29.9
Q ss_pred ccEEEECC-CHHHHHHHHHHH-hCCCCeEEEeccCC
Q 030042 6 KDVVIIGA-GIAGLATALALK-RLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGg-G~~Gl~~A~~l~-~~g~~v~vie~~~~ 39 (184)
..++|.|| |..|..+|..|+ +.|.+|+++.|+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 35999995 999999999999 89999999998654
No 468
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=95.58 E-value=0.022 Score=38.88 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=29.7
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|.|| |..|..+|..|+++|.+|++++++.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 356899987 7999999999999999999998853
No 469
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=95.57 E-value=0.02 Score=42.11 Aligned_cols=38 Identities=26% Similarity=0.517 Sum_probs=32.5
Q ss_pred CCCccccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|+.....|+|+|+|..|...+..+.+.|++|.+++..+
T Consensus 7 m~~~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCC
Confidence 44345689999999999999999999999999998754
No 470
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.55 E-value=0.01 Score=42.17 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
+|.|||+|..|.++|+.|++.+. +++++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999887 899999864
No 471
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.54 E-value=0.0095 Score=44.66 Aligned_cols=34 Identities=24% Similarity=0.519 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
.+..|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4688999999999999999999999999998753
No 472
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.53 E-value=0.013 Score=41.75 Aligned_cols=33 Identities=27% Similarity=0.605 Sum_probs=29.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
.+|.|||+|..|..+|+.|+..|+ +++++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999998888 899999865
No 473
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.52 E-value=0.019 Score=41.63 Aligned_cols=33 Identities=45% Similarity=0.478 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..|.|||.|..|.++|..|++.|.+|++.++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999864
No 474
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.52 E-value=0.014 Score=41.97 Aligned_cols=33 Identities=27% Similarity=0.569 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEecc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV--EPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~ 37 (184)
..+|+|||+|..|.++|+.|+..+. ++.++|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4689999999999999999998776 79999975
No 475
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=95.51 E-value=0.029 Score=38.62 Aligned_cols=38 Identities=26% Similarity=0.510 Sum_probs=31.6
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCCC-eEEEeccC
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGVE-PLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~~-v~vie~~~ 38 (184)
|+++...++|.|| |..|..+|..|+++|.+ |+++++..
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence 6666667899986 67799999999999997 88998865
No 476
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.50 E-value=0.02 Score=41.07 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecc
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKS 37 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~ 37 (184)
...++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 3579999999999999999999998 79999987
No 477
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.49 E-value=0.024 Score=41.18 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=30.8
Q ss_pred ccccEEEECC-CHHHHHHHHHHHh--CCCCeEEEeccCC
Q 030042 4 VEKDVVIIGA-GIAGLATALALKR--LGVEPLVLEKSDG 39 (184)
Q Consensus 4 ~~~dv~IiGg-G~~Gl~~A~~l~~--~g~~v~vie~~~~ 39 (184)
....|+|.|| |..|..++..|.+ .|.+|+++++...
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 3457999976 9999999999999 8999999998543
No 478
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.47 E-value=0.024 Score=40.00 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=30.4
Q ss_pred cccEEEEC-CCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIG-AGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiG-gG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|+| +|.+|.++|..|++.|.+|++++|..
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 35799999 89999999999999999999999853
No 479
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.47 E-value=0.018 Score=40.74 Aligned_cols=33 Identities=30% Similarity=0.450 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...++|+|+|-.|.++|..|++.| +|++++|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 347999999999999999999999 999998853
No 480
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=95.46 E-value=0.029 Score=38.61 Aligned_cols=39 Identities=31% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
|+++...++|.|+ |-.|..+|..|+++|.+|++++++..
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 42 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT 42 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh
Confidence 4444456888886 67899999999999999999998754
No 481
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.45 E-value=0.014 Score=41.06 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
..++|||+|.+|.++|..|.+.|.+|+++++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999999863
No 482
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.42 E-value=0.019 Score=40.80 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...+.|||.|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 483
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.42 E-value=0.02 Score=40.65 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...+.|||.|..|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 484
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.39 E-value=0.021 Score=40.35 Aligned_cols=34 Identities=38% Similarity=0.384 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...++|+|+|-+|.+++..|++.|. +|+|++|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4579999999999999999999998 699998864
No 485
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=95.39 E-value=0.021 Score=41.06 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.|.|+||| .|+.++..+.+.|++|+++|+.+
T Consensus 4 ~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~ 34 (320)
T 2pbz_A 4 IVSTIASH-SSLQILLGAKKEGFKTRLYVSPK 34 (320)
T ss_dssp CEEEESST-THHHHHHHHHHTTCCEEEEECTT
T ss_pred EEEEEcCH-hHHHHHHHHHHCCCEEEEEECCC
Confidence 49999999 99999999999999999999873
No 486
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.39 E-value=0.028 Score=41.19 Aligned_cols=35 Identities=23% Similarity=0.224 Sum_probs=31.2
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 5 EKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 5 ~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
...|+|.|| |..|..++..|.++|.+|++++|...
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 64 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN 64 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 357999998 99999999999999999999998653
No 487
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.38 E-value=0.022 Score=38.31 Aligned_cols=32 Identities=31% Similarity=0.494 Sum_probs=29.5
Q ss_pred cEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.|+|.|| |..|..++..|.++|.+|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999864
No 488
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.38 E-value=0.021 Score=40.73 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=30.6
Q ss_pred ccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 6 KDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 6 ~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
..|+|.|+ |..|..++..|.+.|.+|+++.|+..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 37999996 99999999999999999999998764
No 489
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.38 E-value=0.014 Score=41.99 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=30.4
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCC-------CeEEEecc
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGV-------EPLVLEKS 37 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~-------~v~vie~~ 37 (184)
|++ ...|+|+|| |..|..++..|.+.|. +|+++|+.
T Consensus 1 m~~-~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 1 MKA-PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCC-CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 553 347999998 9999999999998886 79999875
No 490
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=95.37 E-value=0.021 Score=39.64 Aligned_cols=38 Identities=24% Similarity=0.359 Sum_probs=29.5
Q ss_pred CCccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccCC
Q 030042 2 AMVEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSDG 39 (184)
Q Consensus 2 ~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~~ 39 (184)
++....++|.|| |-.|..+|..|+++|.+|++++++..
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 333446888886 67899999999999999999998753
No 491
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.37 E-value=0.029 Score=38.26 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=30.4
Q ss_pred ccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 4 VEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 4 ~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
+...++|.|| |..|..+|..|+++|.+|++++++.
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3457899988 7899999999999999999999864
No 492
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.35 E-value=0.017 Score=43.55 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
...|+|+|+|..|..+|..|++.|.+|+++++..
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 3479999999999999999999999999999853
No 493
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.34 E-value=0.016 Score=40.16 Aligned_cols=33 Identities=27% Similarity=0.220 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 6 KDVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 6 ~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.+|.|||.|..|...|..|.+.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999998999999864
No 494
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=95.33 E-value=0.016 Score=40.60 Aligned_cols=38 Identities=24% Similarity=0.116 Sum_probs=29.8
Q ss_pred CCCccccEEEECC-CHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 1 MAMVEKDVVIIGA-GIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 1 m~~~~~dv~IiGg-G~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
|++....++|.|| |..|..+|..|+++|.+|+++++..
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6655556788876 7889999999999999999999865
No 495
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.32 E-value=0.02 Score=42.48 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEe
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGVEPLVLE 35 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~~v~vie 35 (184)
...|+|+|||..|..++..+.+.|++|.++|
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 5689999999999999999999999999999
No 496
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.32 E-value=0.023 Score=41.04 Aligned_cols=34 Identities=18% Similarity=0.461 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
...|.|||+|..|..+|+.|+..+. +++++|...
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 4589999999999999999998887 799999753
No 497
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.29 E-value=0.024 Score=39.49 Aligned_cols=32 Identities=38% Similarity=0.591 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGVEPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~~v~vie~~~ 38 (184)
.++|||+|..|.++|..|.+.|.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 498
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.29 E-value=0.021 Score=40.27 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...++|+|+|-+|.++++.|.+.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999864
No 499
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.28 E-value=0.027 Score=39.75 Aligned_cols=34 Identities=21% Similarity=0.159 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEeccC
Q 030042 5 EKDVVIIGAGIAGLATALALKRLGV-EPLVLEKSD 38 (184)
Q Consensus 5 ~~dv~IiGgG~~Gl~~A~~l~~~g~-~v~vie~~~ 38 (184)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 4579999999999999999999997 899999864
No 500
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.27 E-value=0.018 Score=41.36 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEeccC
Q 030042 7 DVVIIGAGIAGLATALALKRLGV--EPLVLEKSD 38 (184)
Q Consensus 7 dv~IiGgG~~Gl~~A~~l~~~g~--~v~vie~~~ 38 (184)
.|.|||+|..|..+|+.|++.++ +++++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999998887 899999865
Done!