BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030047
(183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 28 AAQVHHVVGGDRG-W----DSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEY 82
AA VGG G W SS W+ F+ GD I+ Y ++S+ E+ +KE Y
Sbjct: 26 AAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEV-TKEAY 84
Query: 83 ESCNVSNPIRMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNVLPQPHQSSEVAKV 142
SCN +NP+ YTDG + LD G YF+S +C+ G KL + V+ H V
Sbjct: 85 NSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPRHS------V 138
Query: 143 TTAKRSAMPF----AVPPTTPSDSTRFRSSFILFFVRLGL 178
+ S + F A+ P S S R +++ + LGL
Sbjct: 139 ISPAPSPVEFEDGPALAPAPISGSVRLGGCYVVLGLVLGL 178
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 35 VGGDRGW--DSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIR 92
VGG W + + SWS F D + +Y+ +S+ E+ K +Y++CN NPI+
Sbjct: 33 VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVN-KADYDACNTKNPIK 91
Query: 93 MYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNVL 130
DG I LD G YF+S DNCK G KL+V V+
Sbjct: 92 RVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVI 129
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 33 HVVGGDRGWD---SSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSN 89
H+VG + GW S + + W+AG+ FR GD + + ++ E+++K+ +++CN N
Sbjct: 5 HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVN 64
Query: 90 PIRMYTDGLDVIP-LDGEGIHYFVSSKYDNCKNGLKLHVNVL 130
VI LD G+HYFV + +C NG KL +NV+
Sbjct: 65 SDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVV 106
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 6 MVKALVMIMAVALSLGLGGQWAAAQVH-HVVGGDRGWDSSSDVASWSAGRVFRAGDKILL 64
M + V+I AV L+ + + VG ++ W+ + + W+ G+ F GD +
Sbjct: 1 MARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYF 60
Query: 65 AYSPAQESIAELQSKEEYESCNVSNPIRMYTDGL--DVIPLDGEGIHYFVSSKYDNCKNG 122
+ Q +I E+ +K +YE C +PIR +T G D++ L+ + HY++ C G
Sbjct: 61 VFDRNQHNILEV-NKTDYEGCIADHPIRNWTRGAGRDIVTLN-QTKHYYLLDGKGGCYGG 118
Query: 123 LKLHVNV--LPQPHQSSEVAKV 142
+KL V V LP P +S+ V +
Sbjct: 119 MKLSVKVEKLPPPPKSAPVKNI 140
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 33 HVVGGDRGWDSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIR 92
+VVGG GW +++ SW G+ FRAGD +L Y+P ++ + ++ + +CN +
Sbjct: 3 YVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVV-NQGGFSTCNTPAGAK 59
Query: 93 MYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNVL 130
+YT G D I L +G YF+ + +C++G+K+ VN L
Sbjct: 60 VYTSGRDQIKLP-KGQSYFICNFPGHCQSGMKIAVNAL 96
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 33 HVVGGDRGWDS--SSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNP 90
H VG GW + D A W++ F GD +L Y+ ++ ++ +E+++SCN S+P
Sbjct: 4 HKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVD-QEQFKSCNSSSP 62
Query: 91 IRMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNVLP 131
YT G D IPL G YF+ +C+ G K+ + V P
Sbjct: 63 AASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 28 AAQVHHVVGGDRGWDSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNV 87
A V + VG GW + + W AG+ FRAGD ++ Y+PA ++ + + Y+SC
Sbjct: 28 AESVVYTVGDGGGW--TFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAG-GYKSCTA 84
Query: 88 SNPIRMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVN 128
S R++ G D I L G +YF+ S +C+ GLK+ V
Sbjct: 85 SPGSRVFKSGDDRITLS-RGTNYFICSVPGHCQGGLKIAVT 124
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 33 HVVGGDRGWDSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIR 92
+ VG GW D ++W++ + F GD ++ Y ++ E++ + +Y+SC N I
Sbjct: 27 YTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVK-ESDYKSCTSGNSIS 85
Query: 93 MYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNV 129
+ G IPL G HYF+ + G+KL + V
Sbjct: 86 TDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 44 SSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIRMYTDGLDVIPL 103
S + W+ FR GD ++ Y ++S+ ++ +K+ Y +CN +NP Y++G + L
Sbjct: 42 SESLNKWAESLRFRVGDTLVWKYDEEKDSVLQV-TKDAYINCNTTNPAANYSNGDTKVKL 100
Query: 104 DGEGIHYFVSSKYDNCKNGLKLHVNVL 130
+ G ++F+S NC G KLH+ V+
Sbjct: 101 ERSGPYFFISGSKSNCVEGEKLHIVVM 127
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 35 VGGDRGWDSSSD---VASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPI 91
VGGD W SD +W+ G+ FR GD++ ++ +A + +K+ +++C NPI
Sbjct: 5 VGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVA-VVTKDAFDNCKKENPI 63
Query: 92 RMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNVL 130
T I L+ G Y++ + D+C+ G KL +NV+
Sbjct: 64 SHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVV 102
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 41 WDSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIRMYTDGLDV 100
W + D + W+ G+ FR GD +L + ++ K Y+ C+ S+ ++DG
Sbjct: 36 WTTGVDYSGWATGKTFRVGD--ILEFKYGSSHTVDVVDKAGYDGCDASSSTENHSDGDTK 93
Query: 101 IPLDGEGIHYFVSSKYDNCKN--GLKLHVNVL 130
I L GI+YF+ S +C+ G+KL VNV+
Sbjct: 94 IDLKTVGINYFICSTPGHCRTNGGMKLAVNVV 125
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 47 VASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIRMYTDGLDVIPLDGE 106
+ W++ F GD I Y+ ES+ E++ +E+Y+ C + + DG ++ L
Sbjct: 46 LTRWASNYQFIVGDTITFQYNNKTESVHEVE-EEDYDRCGIRGEHVDHYDGNTMVVLKKT 104
Query: 107 GIHYFVSSKYDNCKNGLKLHVNVLPQP 133
GIH+F+S K +C+ GLKL V V+ P
Sbjct: 105 GIHHFISGKKRHCRLGLKLAVVVMVAP 131
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 8 KALVMIMAVALSLGLGGQWAAAQVHHVVGGDRG-WDSSSDVASWSAGRVFRAGDKILLAY 66
+A+V +MAV++ L L + A + V GD G W + + W G+ FRAGD ++ Y
Sbjct: 13 RAIVTLMAVSVLL-LQADYVQAATYTV--GDSGIW--TFNAVGWPKGKHFRAGDVLVFNY 67
Query: 67 SPAQESIAELQSKEEYESCNVSNPIRMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLH 126
+P ++ ++ S Y +C + YT G D I L +G ++F+ + ++C++ +K+
Sbjct: 68 NPRMHNVVKVDS-GSYNNCKTPTGAKPYTSGKDRITLS-KGQNFFICNFPNHCESDMKIA 125
Query: 127 VNVL 130
V +
Sbjct: 126 VTAV 129
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 35 VGGDRGWDSSSD---VASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPI 91
VG D W D +W+ G+ FR GD++ ++ + +A + S+ +E+C PI
Sbjct: 27 VGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVA-VVSEAAFENCEKEKPI 85
Query: 92 RMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNVL 130
T I L+ G YF+ + D+C+ G KL + V+
Sbjct: 86 SHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 124
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 48 ASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVSNPIRMYTDGLDVIPLDGEG 107
A W++ F GD IL Y ES+ E+ ++ +Y C+ + + DG + LD G
Sbjct: 47 ARWASAHEFTVGDTILFEYDNETESVHEV-NEHDYIMCHTNGEHVEHHDGNTKVVLDKIG 105
Query: 108 IHYFVSSKYDNCKNGLKLHVNV 129
+++F+S +CK GLKL V V
Sbjct: 106 VYHFISGTKRHCKMGLKLAVVV 127
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 33 HVVGGDR--GWDSSSD---VASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNV 87
++VGG GW SD A WSA + F+ D + ++ ++S+AE+ +E Y +C++
Sbjct: 4 YLVGGPELGGWKLQSDPRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDI 63
Query: 88 SNPIRMYTDGLDVIPLDGEGIHYFVS--SKYDNCKNG 122
+PIR+ G D L G H+ + K+ C G
Sbjct: 64 KDPIRLEPGGPDRFTLLTPGSHFICTKDQKFVACVPG 100
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 33 HVVGGDRGW------DSSSDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCN 86
+ VG GW D D W++ + F GD ++ Y ++ ++ +++ Y+SCN
Sbjct: 3 YTVGDSAGWKVPFFGDVDYD-WKWASNKTFHIGDVLVFKYDRRFHNVDKV-TQKNYQSCN 60
Query: 87 VSNPIRMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLKLHVNV 129
+ PI Y G B I L G Y++ +C G K+H+NV
Sbjct: 61 DTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 33 HVVGG-DRGWD---SSSD-VASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNV 87
+VVGG ++ W S D ++ W+ F+ GD ++ Y ES+ E ++ +YE CN
Sbjct: 29 YVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTESVHE-GNETDYEGCNT 87
Query: 88 SNPIRMYTDGLDV-IPLDGEGIHYFVSSKYDNCKNGLKLHVNVL 130
+ +G + + L G +F+S +C+ GLKL V V+
Sbjct: 88 VGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVI 131
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 1 MVGVRMVKALVMIMAVALSLGLGGQWAAAQVH-HVVGGDRGW--DSSSDVASWSAGRVFR 57
M R MAV LGL +++++ + GG GW D + W+ F+
Sbjct: 1 MEASRRWPYAAWFMAV---LGLVAVFSSSEAYVFYAGGRDGWVVDPAESFNYWAERNRFQ 57
Query: 58 AGDKILLAYSPAQESIAELQSKEEYESCNVSNPIRMYTD---GLDVIPLDGEGIHYFVSS 114
D I+ + ++ ++++C+ NP++ D G V D G +F+S
Sbjct: 58 VNDTIVFLHDDEVGGSVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISG 117
Query: 115 KYDNCKNGLKLHVNVLP-QPHQSSEVAKVTTA 145
D C+ G KL++ V+ +P + SE + A
Sbjct: 118 DEDRCQKGQKLYIIVMAVRPTKPSEAPEPAGA 149
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 66 YSPAQESIAELQSKEEYESCN-VSNPIRMYTDGLDVIPLDGEGIHYFVSSKYDNCKNGLK 124
Y ES+ E+ ++ +YE CN V ++ DG + L G +F+S +C+ GLK
Sbjct: 2 YDERTESVHEV-NETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLK 60
Query: 125 LHVNVLPQ 132
L V V+
Sbjct: 61 LMVVVMSN 68
>sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3
PE=2 SV=2
Length = 365
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 33 HVVGGDRG--WDSS--SDVASWSAGRVFRAGDKILLAYSPAQESIAELQSKEEYESCNVS 88
H++ D G W++S +D AG F+A IL A SP ++ E + KE ++
Sbjct: 172 HMLTDDLGELWENSLFTDCCLLVAGHEFKAHKAILAARSPVFRAMFENEMKE-----SLK 226
Query: 89 NPIRMYTDGLDVI 101
NPI + LDV
Sbjct: 227 NPIEIMDLDLDVF 239
>sp|Q03ZE9|FENR_LEUMM Ferredoxin--NADP reductase OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=LEUM_0297
PE=3 SV=1
Length = 336
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 90 PIRMYTDGLDVIPLDGEGIHYFVSSKYD 117
P +M G+D L G+GIHYFV++K+D
Sbjct: 123 PRKMQVSGVD--QLVGQGIHYFVTNKHD 148
>sp|Q01901|POLG_PRSVH Genome polyprotein OS=Papaya ringspot virus (strain P / mutant HA)
PE=3 SV=2
Length = 3344
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 102 PLDGEGIHYFVSSKYDNCKNGLKLHVNVLPQPHQ 135
PLD E HY V ++D N L + V+ +PH+
Sbjct: 993 PLDSEMKHYIVGGEFDPTTNCLHQLIRVIYKPHE 1026
>sp|P0CJ98|MVP_PRSVH P3N-PIPO polyprotein OS=Papaya ringspot virus (strain P / mutant HA)
PE=3 SV=2
Length = 1228
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 102 PLDGEGIHYFVSSKYDNCKNGLKLHVNVLPQPHQ 135
PLD E HY V ++D N L + V+ +PH+
Sbjct: 993 PLDSEMKHYIVGGEFDPTTNCLHQLIRVIYKPHE 1026
>sp|Q9Z109|VSIG2_MOUSE V-set and immunoglobulin domain-containing protein 2 OS=Mus
musculus GN=Vsig2 PE=2 SV=2
Length = 328
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 50 WSAGRVFRAG---DKILLAYSPAQESIAELQSKEEYES------CNVSNPIRMYTDGLDV 100
++ G ++ G D+ +L + P +A L+ + S CNV+NP YT+GL +
Sbjct: 78 FTNGHLYPTGSKADRAILLHDPPTGGLATLKLTDLRPSDTGTYLCNVNNPPDFYTNGLGL 137
Query: 101 IPL 103
I L
Sbjct: 138 INL 140
>sp|P53751|YN94_YEAST Uncharacterized membrane glycoprotein YNR065C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YNR065C PE=4
SV=1
Length = 1116
Score = 30.0 bits (66), Expect = 9.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 96 DGLDVIPLDGEGIHYFVSSKY-----DNCKNGLKLHVNVLPQPHQSSEVA 140
+G D+ + + I Y+ SS Y CK GLKL ++ P P E A
Sbjct: 878 NGADICKKEPDLIEYYDSSGYRKIPLSTCKGGLKLDAHLAPHPCPGKEKA 927
>sp|P40890|VTH2_YEAST VPS10 homolog 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VTH2 PE=1 SV=1
Length = 1549
Score = 30.0 bits (66), Expect = 9.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 96 DGLDVIPLDGEGIHYFVSSKY-----DNCKNGLKLHVNVLPQPHQSSEVA 140
+G D+ + + I Y+ SS Y CK GLKL ++ P P E A
Sbjct: 1311 NGADICKKEPDLIEYYDSSGYRKIPLSTCKGGLKLDAHLAPHPCPGKEKA 1360
>sp|C8ZAZ9|VTH2_YEAS8 VPS10 homolog 2 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 /
Prise de mousse) GN=VTH2 PE=3 SV=2
Length = 1495
Score = 30.0 bits (66), Expect = 9.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 96 DGLDVIPLDGEGIHYFVSSKY-----DNCKNGLKLHVNVLPQPHQSSEVA 140
+G D+ + + I Y+ SS Y CK GLKL ++ P P E A
Sbjct: 1311 NGADICKKEPDLIEYYDSSGYRKIPLSTCKGGLKLDAHLAPHPCPGKEKA 1360
>sp|P40438|VTH1_YEAST VPS10 homolog 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VTH1 PE=1 SV=1
Length = 1549
Score = 30.0 bits (66), Expect = 9.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 96 DGLDVIPLDGEGIHYFVSSKY-----DNCKNGLKLHVNVLPQPHQSSEVA 140
+G D+ + + I Y+ SS Y CK GLKL ++ P P E A
Sbjct: 1311 NGADICKKEPDLIEYYDSSGYRKIPLSTCKGGLKLDAHLAPHPCPGKEKA 1360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,563,330
Number of Sequences: 539616
Number of extensions: 2611422
Number of successful extensions: 6259
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 6223
Number of HSP's gapped (non-prelim): 32
length of query: 183
length of database: 191,569,459
effective HSP length: 110
effective length of query: 73
effective length of database: 132,211,699
effective search space: 9651454027
effective search space used: 9651454027
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)