Your job contains 1 sequence.
>030058
MARFRNSKKKGFVKSFVKKKQPTVDHITGDKIPKSFVFSRGKLPGPLRQLEMDLRKLMLP
HTALNLKEKKRNNLKDFLNVAGPMGVTHFLMLSKTESAPYLRVARTPQGPTLTFKIHEYS
LAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGTGDQHLKLTTIMFQNIFPAIDINTVSDQT
III
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030058
(183 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159213 - symbol:PPAN "PETER PAN-like protein"... 611 1.3e-59 1
MGI|MGI:2178445 - symbol:Ppan "peter pan homolog (Drosoph... 342 4.2e-31 1
UNIPROTKB|E2RGE3 - symbol:PPAN "Uncharacterized protein" ... 339 2.6e-30 1
UNIPROTKB|Q9NQ55 - symbol:PPAN "Suppressor of SWI4 1 homo... 332 4.9e-30 1
POMBASE|SPAC1B9.03c - symbol:SPAC1B9.03c "RNA-binding pro... 279 2.0e-24 1
UNIPROTKB|A8MV53 - symbol:PPAN "HCG2033702, isoform CRA_a... 271 2.2e-23 1
WB|WBGene00003062 - symbol:lpd-6 species:6239 "Caenorhabd... 274 4.1e-23 1
UNIPROTKB|G4NEI7 - symbol:MGG_00087 "Ribosome biogenesis ... 255 2.7e-21 1
FB|FBgn0010770 - symbol:ppan "peter pan" species:7227 "Dr... 249 1.1e-20 1
ASPGD|ASPL0000017584 - symbol:AN4232 species:162425 "Emer... 242 5.7e-20 1
SGD|S000001108 - symbol:SSF1 "Constituent of 66S pre-ribo... 241 8.1e-20 1
SGD|S000002720 - symbol:SSF2 "Protein required for riboso... 241 8.1e-20 1
>TAIR|locus:2159213 [details] [associations]
symbol:PPAN "PETER PAN-like protein" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
EMBL:CP002688 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
PROSITE:PS50833 KO:K14859 OMA:HAPLVIM IPI:IPI00541762
RefSeq:NP_568939.2 RefSeq:NP_974976.1 UniGene:At.20157
ProteinModelPortal:F4K3M1 PRIDE:F4K3M1 EnsemblPlants:AT5G61770.2
EnsemblPlants:AT5G61770.3 GeneID:836299 KEGG:ath:AT5G61770
Uniprot:F4K3M1
Length = 346
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 124/181 (68%), Positives = 137/181 (75%)
Query: 1 MARFRNXXXXXXXXX-XXXXXQPTVDHITGDKIPKSFVFSRGKLPGPLRQLEMDLRKLML 59
M RF+N Q V H+TGDKIPKSFVFSR KL GP++QL+MDLRKLML
Sbjct: 1 MGRFKNNKKSRVIGKPIAKKNQEDVSHVTGDKIPKSFVFSRMKLAGPVKQLQMDLRKLML 60
Query: 60 PHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLMLSKTESAPYLRVARTPQGPTLTFKIHEY 119
P+TA DFLNV+GPMGVTHFLMLSKT S+ LRVARTPQGPTLTFKIH+Y
Sbjct: 61 PYTALSLKEKKRNTLRDFLNVSGPMGVTHFLMLSKTASSLSLRVARTPQGPTLTFKIHQY 120
Query: 120 SLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGTGDQHLKLTTIMFQNIFPAIDINTVSDQ 179
SLA D+AQSQLRPRCPQDLFK+ PLIVLSGFG+ + HLKL TIMFQNIFPAIDINTV
Sbjct: 121 SLASDIAQSQLRPRCPQDLFKSPPLIVLSGFGSQELHLKLATIMFQNIFPAIDINTVKLS 180
Query: 180 T 180
T
Sbjct: 181 T 181
>MGI|MGI:2178445 [details] [associations]
symbol:Ppan "peter pan homolog (Drosophila)" species:10090
"Mus musculus" [GO:0001560 "regulation of cell growth by
extracellular stimulus" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] InterPro:IPR004154 MGI:MGI:2178445 GO:GO:0005730
EMBL:CH466522 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
SUPFAM:SSF52954 PROSITE:PS50833 GO:GO:0001560 KO:K14859
eggNOG:NOG272199 OrthoDB:EOG4P2Q1Q CTD:56342
GeneTree:ENSGT00530000064158 HOGENOM:HOG000210038
HOVERGEN:HBG026954 OMA:RRVMEPF EMBL:AK039027 EMBL:BC014688
IPI:IPI00130510 RefSeq:NP_663585.2 UniGene:Mm.2930
ProteinModelPortal:Q91YU8 STRING:Q91YU8 PhosphoSite:Q91YU8
PaxDb:Q91YU8 PRIDE:Q91YU8 Ensembl:ENSMUST00000004203 GeneID:235036
KEGG:mmu:235036 InParanoid:Q8BYM4 NextBio:382469 Bgee:Q91YU8
CleanEx:MM_PPAN Genevestigator:Q91YU8 GermOnline:ENSMUSG00000004100
Uniprot:Q91YU8
Length = 470
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 69/149 (46%), Positives = 98/149 (65%)
Query: 33 PKSFVFSRGKLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLML 92
P SFVF+RG+ +RQL +D+R++M P TA D + VAGP+GVTHFL+L
Sbjct: 29 PHSFVFTRGRAGRNVRQLSLDVRRVMEPLTATRLQVRKKNSLKDCVAVAGPLGVTHFLIL 88
Query: 93 SKTESAPYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGT 152
+KT+++ YL++ R P GPTLTF+I +Y+L DV S R R + F PL+VL+ FG
Sbjct: 89 TKTDNSVYLKLMRLPGGPTLTFQISKYTLIRDVVSSLRRHRMHEQQFNHPPLLVLNSFGP 148
Query: 153 GDQHLKLTTIMFQNIFPAIDINTVSDQTI 181
H+KL MFQN+FP+I+++TV+ TI
Sbjct: 149 QGMHIKLMATMFQNLFPSINVHTVNLNTI 177
>UNIPROTKB|E2RGE3 [details] [associations]
symbol:PPAN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045028 "G-protein coupled purinergic nucleotide receptor
activity" evidence=IEA] InterPro:IPR000276 InterPro:IPR002286
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01157
PROSITE:PS00237 PROSITE:PS50262 InterPro:IPR004154 GO:GO:0016021
InterPro:IPR007109 Pfam:PF04427 SMART:SM00879 SUPFAM:SSF52954
PROSITE:PS50833 GO:GO:0045028 GeneTree:ENSGT00530000064158
EMBL:AAEX03012427 UniGene:Cfa.8183 Ensembl:ENSCAFT00000028435
Uniprot:E2RGE3
Length = 559
Score = 339 (124.4 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 70/149 (46%), Positives = 96/149 (64%)
Query: 33 PKSFVFSRGKLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLML 92
P SFVF+RG+ +RQL +DLR++M P TA D + VAGP+GVTHFL+L
Sbjct: 29 PHSFVFARGRAGRGVRQLSLDLRRVMEPLTATRLQIRKKNTLKDCVAVAGPLGVTHFLIL 88
Query: 93 SKTESAPYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGT 152
SKTE+ Y ++ R P GPTLTF+I++Y+L DV S R R + F PL+VL+ FG
Sbjct: 89 SKTETNIYFKLMRLPGGPTLTFRINKYTLVRDVVSSLRRHRMHEQQFAHPPLLVLNSFGP 148
Query: 153 GDQHLKLTTIMFQNIFPAIDINTVSDQTI 181
H+KL MFQN+FP+I+++ V+ TI
Sbjct: 149 HGMHVKLMATMFQNLFPSINVHKVNLNTI 177
>UNIPROTKB|Q9NQ55 [details] [associations]
symbol:PPAN "Suppressor of SWI4 1 homolog" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA
splicing" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005634 GO:GO:0005737
GO:GO:0008380 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
PROSITE:PS50833 KO:K14859 EMBL:AJ300588 UniGene:Hs.14468
eggNOG:NOG272199 CTD:56342 ChiTaRS:PPAN EMBL:AJ292529 EMBL:BC000535
EMBL:BC009833 EMBL:BC033202 IPI:IPI00219793 IPI:IPI00329590
PIR:JC7359 RefSeq:NP_001035754.1 RefSeq:NP_064615.3
ProteinModelPortal:Q9NQ55 IntAct:Q9NQ55 STRING:Q9NQ55
PhosphoSite:Q9NQ55 DMDM:21264056 SWISS-2DPAGE:Q9NQ55 PaxDb:Q9NQ55
PRIDE:Q9NQ55 DNASU:56342 DNASU:692312 Ensembl:ENST00000253107
Ensembl:ENST00000556468 GeneID:56342 GeneID:692312 KEGG:hsa:56342
KEGG:hsa:692312 UCSC:uc002mmz.2 CTD:692312 GeneCards:GC19P010216
HGNC:HGNC:9227 HPA:HPA043265 MIM:607793 neXtProt:NX_Q9NQ55
PharmGKB:PA162399971 HOGENOM:HOG000210038 HOVERGEN:HBG026954
InParanoid:Q9NQ55 OMA:RRVMEPF PhylomeDB:Q9NQ55 NextBio:61989
ArrayExpress:Q9NQ55 Bgee:Q9NQ55 CleanEx:HS_PPAN
Genevestigator:Q9NQ55 GermOnline:ENSG00000130810 Uniprot:Q9NQ55
Length = 473
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 69/149 (46%), Positives = 94/149 (63%)
Query: 33 PKSFVFSRGKLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLML 92
P SFVF+RG +RQL +D+R++M P TA D + VAGP+GVTHFL+L
Sbjct: 29 PHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVRKKNSLKDCVAVAGPLGVTHFLIL 88
Query: 93 SKTESAPYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGT 152
SKTE+ Y ++ R P GPTLTF++ +YSL DV S R R + F PL+VL+ FG
Sbjct: 89 SKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSLRRHRMHEQQFAHPPLLVLNSFGP 148
Query: 153 GDQHLKLTTIMFQNIFPAIDINTVSDQTI 181
H+KL MFQN+FP+I+++ V+ TI
Sbjct: 149 HGMHVKLMATMFQNLFPSINVHKVNLNTI 177
>POMBASE|SPAC1B9.03c [details] [associations]
symbol:SPAC1B9.03c "RNA-binding protein involved in
ribosomal large subunit assembly and maintenance (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0019843 "rRNA binding" evidence=ISO]
PomBase:SPAC1B9.03c EMBL:CU329670 GO:GO:0005730 GO:GO:0019843
InterPro:IPR007109 Pfam:PF04427 SMART:SM00879 PROSITE:PS50833
GO:GO:0000027 KO:K14859 eggNOG:NOG272199 HOGENOM:HOG000210038
OMA:RRVMEPF OrthoDB:EOG4FV08S PIR:T38041 PIR:T39008
RefSeq:NP_593755.2 STRING:O14206 EnsemblFungi:SPAC1B9.03c.1
GeneID:2542610 KEGG:spo:SPAC1B9.03c NextBio:20803659 Uniprot:O14206
Length = 389
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/155 (41%), Positives = 85/155 (54%)
Query: 25 DHITGDKIPKSFVFSRG--KLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAG 82
D I IPKS V G ++ L L DLR +M PHTA D+L +AG
Sbjct: 18 DPIQEAAIPKSMVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRLKERKANKIKDYLTMAG 77
Query: 83 PMGVTHFLMLSKTESAPYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTS 142
P+GVTH L+LS+T++ LR+ R P+GP+L F+IHEY L DV + Q P+ P F T
Sbjct: 78 PLGVTHLLVLSRTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKNPKSPTTEFLTP 137
Query: 143 PLIVLSGFGTGDQ----HLKLTTIMFQNIFPAIDI 173
PL+V++ F H L T FQN+FP I +
Sbjct: 138 PLLVMNHFNQNSSKDSPHEALLTTTFQNMFPPISV 172
>UNIPROTKB|A8MV53 [details] [associations]
symbol:PPAN "HCG2033702, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0005634 GO:GO:0005737 EMBL:CH471106 InterPro:IPR007109
Pfam:PF04427 SMART:SM00879 PROSITE:PS50833 EMBL:AC020931
eggNOG:NOG272199 ChiTaRS:PPAN HGNC:HGNC:9227 HOGENOM:HOG000210038
HOVERGEN:HBG026954 IPI:IPI00853335 STRING:A8MV53
Ensembl:ENST00000393793 Uniprot:A8MV53
Length = 420
Score = 271 (100.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 57/124 (45%), Positives = 76/124 (61%)
Query: 58 MLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLMLSKTESAPYLRVARTPQGPTLTFKIH 117
M P TA D + VAGP+GVTHFL+LSKTE+ Y ++ R P GPTLTF++
Sbjct: 1 MEPLTASRLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVK 60
Query: 118 EYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGTGDQHLKLTTIMFQNIFPAIDINTVS 177
+YSL DV S R R + F PL+VL+ FG H+KL MFQN+FP+I+++ V+
Sbjct: 61 KYSLVRDVVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVN 120
Query: 178 DQTI 181
TI
Sbjct: 121 LNTI 124
>WB|WBGene00003062 [details] [associations]
symbol:lpd-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
PROSITE:PS50833 KO:K14859 eggNOG:NOG272199
GeneTree:ENSGT00530000064158 EMBL:FO080868 PIR:T32923
RefSeq:NP_491108.2 ProteinModelPortal:O44991 IntAct:O44991
STRING:O44991 PaxDb:O44991 EnsemblMetazoa:K09H9.6.1
EnsemblMetazoa:K09H9.6.2 GeneID:171886 KEGG:cel:CELE_K09H9.6
UCSC:K09H9.6 CTD:171886 WormBase:K09H9.6 HOGENOM:HOG000017331
InParanoid:O44991 OMA:EIWRTIL NextBio:873107 Uniprot:O44991
Length = 573
Score = 274 (101.5 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 58/145 (40%), Positives = 87/145 (60%)
Query: 33 PKSFVFSRGKLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLML 92
P V RG + ++ LE DLR L+ P+TA DF+ +GVT+ ++L
Sbjct: 56 PHCLVIHRGDVGKYVKGLESDLRNLVEPNTAKNLKILKRNNIKDFIVNGAVLGVTNMMVL 115
Query: 93 SKTESAPYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGT 152
+ ++++ LR+ R QGPTL+FK+ +YSLA V Q RP LFK+SPL+V++GFG
Sbjct: 116 TSSDASLQLRMMRFSQGPTLSFKVKQYSLARHVVNCQKRPVATDKLFKSSPLVVMNGFGD 175
Query: 153 GDQ-HLKLTTIMFQNIFPAIDINTV 176
G Q HL L QN+FP+I+++T+
Sbjct: 176 GTQKHLSLVQTFIQNMFPSINVDTI 200
>UNIPROTKB|G4NEI7 [details] [associations]
symbol:MGG_00087 "Ribosome biogenesis protein SSF1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
GO:GO:0005730 EMBL:CM001235 GO:GO:0019843 InterPro:IPR007109
Pfam:PF04427 SMART:SM00879 PROSITE:PS50833 GO:GO:0000027 KO:K14859
InterPro:IPR026531 PANTHER:PTHR12661:SF2 RefSeq:XP_003719048.1
EnsemblFungi:MGG_00087T0 GeneID:2674828 KEGG:mgr:MGG_00087
Uniprot:G4NEI7
Length = 474
Score = 255 (94.8 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 63/161 (39%), Positives = 93/161 (57%)
Query: 33 PKSFVF--SRGKLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFL 90
PKS V G++ + QL D+R++M P TA D+L + GP+GVTH L
Sbjct: 34 PKSMVIRIGAGEVGSSVSQLATDVRRVMEPGTASRLKERRANKLRDYLVMCGPLGVTHLL 93
Query: 91 MLSKTESAPY-LRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSG 149
+ S++ES LRVA TP+GPTL F++ +YSL DV +SQ RP+ F TSPL+V++
Sbjct: 94 LFSRSESGNVNLRVALTPRGPTLHFRVEKYSLTKDVQKSQRRPKGQGKEFVTSPLLVMNN 153
Query: 150 FGTGD--------QHLK-LTTIMFQNIFPAIDINTVSDQTI 181
F + +HL+ LTT +FQ++F I+ S ++I
Sbjct: 154 FSSSSADAPSKTPKHLESLTTTVFQSLFAPINPQKTSLKSI 194
>FB|FBgn0010770 [details] [associations]
symbol:ppan "peter pan" species:7227 "Drosophila
melanogaster" [GO:0007444 "imaginal disc development" evidence=IMP]
[GO:0002164 "larval development" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0022008 "neurogenesis" evidence=IMP] EMBL:AE014297
GO:GO:0022008 GO:GO:0048477 GO:GO:0007292 GO:GO:0007444
InterPro:IPR007109 Pfam:PF04427 SMART:SM00879 PROSITE:PS50833
GO:GO:0002164 KO:K14859 eggNOG:NOG272199 EMBL:AF102805
RefSeq:NP_476979.1 ProteinModelPortal:Q9VDE5 STRING:Q9VDE5
PaxDb:Q9VDE5 PRIDE:Q9VDE5 EnsemblMetazoa:FBtr0084012 GeneID:42502
KEGG:dme:Dmel_CG5786 CTD:56342 FlyBase:FBgn0010770
GeneTree:ENSGT00530000064158 InParanoid:Q9VDE5 OMA:HAPLVIM
OrthoDB:EOG40K6FJ PhylomeDB:Q9VDE5 ChiTaRS:PPAN GenomeRNAi:42502
NextBio:829128 Bgee:Q9VDE5 GermOnline:CG5786 Uniprot:Q9VDE5
Length = 460
Score = 249 (92.7 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 52/149 (34%), Positives = 83/149 (55%)
Query: 33 PKSFVFSRGKLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTHFLML 92
P SFV RG + L +D R++M P TA DF++++ V+H +
Sbjct: 28 PHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIKDFVSLSSFFHVSHMGIF 87
Query: 93 SKTESAPYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVLSGFGT 152
+K + +V R P+GP+LTFK+H+++LA DV + D FK +PL++++ F
Sbjct: 88 NKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSG 147
Query: 153 GDQHLKLTTIMFQNIFPAIDINTVSDQTI 181
+HLKL FQN+FP+I++ TV+ TI
Sbjct: 148 DGKHLKLMATTFQNMFPSINLATVNIGTI 176
>ASPGD|ASPL0000017584 [details] [associations]
symbol:AN4232 species:162425 "Emericella nidulans"
[GO:0000747 "conjugation with cellular fusion" evidence=IEA]
[GO:0008361 "regulation of cell size" evidence=IEA] [GO:0000027
"ribosomal large subunit assembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
EMBL:BN001302 InterPro:IPR007109 Pfam:PF04427 SMART:SM00879
PROSITE:PS50833 EMBL:AACD01000068 KO:K14859 eggNOG:NOG272199
OMA:HAPLVIM HOGENOM:HOG000210038 OrthoDB:EOG4FV08S
InterPro:IPR026531 PANTHER:PTHR12661:SF2 RefSeq:XP_661836.1
STRING:Q5B5E8 EnsemblFungi:CADANIAT00004428 GeneID:2873653
KEGG:ani:AN4232.2 Uniprot:Q5B5E8
Length = 442
Score = 242 (90.2 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 60/154 (38%), Positives = 87/154 (56%)
Query: 31 KIPKSFVFSRG--KLPGPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTH 88
K PKS V G ++ + QL D+R +M P TA D+ +AGP+GVTH
Sbjct: 29 KTPKSMVIRIGGSRVGSSVSQLVKDVRLMMEPDTAVRLKERKSNRLRDYAVMAGPLGVTH 88
Query: 89 FLMLSKTESA-PYLRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRCPQDLFKTSPLIVL 147
FL+ SK+ + +R+A TP+GPTL FK+ YSL DV ++ RPR KT PL+V+
Sbjct: 89 FLLFSKSSTGNTNMRLALTPRGPTLNFKVESYSLCRDVEKALKRPRGGGQDHKTPPLLVM 148
Query: 148 SGFGT--GDQHLK-------LTTIMFQNIFPAID 172
+ F + D++ K LTT +FQ++FP I+
Sbjct: 149 NNFNSPNADENSKVPKRLESLTTTVFQSLFPPIN 182
>SGD|S000001108 [details] [associations]
symbol:SSF1 "Constituent of 66S pre-ribosomal particles"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP;IPI] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IPI] [GO:0008361 "regulation of cell size"
evidence=IMP] [GO:0000747 "conjugation with cellular fusion"
evidence=IGI] SGD:S000001108 GO:GO:0005730 EMBL:BK006934
GO:GO:0008361 GO:GO:0019843 GO:GO:0000747 InterPro:IPR007109
Pfam:PF04427 SMART:SM00879 PROSITE:PS50833 GO:GO:0000027
EMBL:U00061 KO:K14859 GeneTree:ENSGT00530000064158
HOGENOM:HOG000210038 EMBL:U18113 PIR:S46700 RefSeq:NP_011933.1
ProteinModelPortal:P38789 DIP:DIP-6501N IntAct:P38789
MINT:MINT-612836 STRING:P38789 PeptideAtlas:P38789
EnsemblFungi:YHR066W GeneID:856463 KEGG:sce:YHR066W CYGD:YHR066w
OMA:KGPGHKP OrthoDB:EOG4FV08S NextBio:982114 Genevestigator:P38789
GermOnline:YHR066W InterPro:IPR026531 PANTHER:PTHR12661:SF2
Uniprot:P38789
Length = 453
Score = 241 (89.9 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 61/156 (39%), Positives = 85/156 (54%)
Query: 32 IPKSFVFSRGKLP---GPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTH 88
IPKS V G+ L QL D R++M PHTA DF+ + GP+GVTH
Sbjct: 22 IPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAIKLKERKSNKLKDFVVMCGPLGVTH 81
Query: 89 FLMLSKTESAPY--LRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRC-PQDLFKTSPLI 145
M +++E L++ARTPQGPT+TF++ +YSL D+ + RP+ D PL+
Sbjct: 82 LFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDIKKFLKRPKSLNNDDVLNPPLL 141
Query: 146 VLSGFGTG------DQHL---KLTTIMFQNIFPAID 172
VL+GF T DQ + K+ MFQNIFP ++
Sbjct: 142 VLNGFSTSKRSGEDDQDVNVEKVIVSMFQNIFPPLN 177
>SGD|S000002720 [details] [associations]
symbol:SSF2 "Protein required for ribosomal large subunit
maturation" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;ISS;IDA] [GO:0019843 "rRNA binding"
evidence=IPI] [GO:0000027 "ribosomal large subunit assembly"
evidence=ISS;IMP] [GO:0000747 "conjugation with cellular fusion"
evidence=IGI] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] SGD:S000002720 GO:GO:0005730
EMBL:BK006938 GO:GO:0019843 GO:GO:0000747 EMBL:U28374
InterPro:IPR007109 Pfam:PF04427 SMART:SM00879 PROSITE:PS50833
GO:GO:0000027 RefSeq:NP_010598.3 GeneID:851907 KEGG:sce:YDR312W
KO:K14859 RefSeq:NP_010602.3 GeneID:851911 KEGG:sce:YDR316W
eggNOG:NOG272199 GeneTree:ENSGT00530000064158 HOGENOM:HOG000210038
OMA:RRVMEPF OrthoDB:EOG4FV08S InterPro:IPR026531
PANTHER:PTHR12661:SF2 EMBL:U18114 PIR:S50248
ProteinModelPortal:Q12153 DIP:DIP-6502N IntAct:Q12153
MINT:MINT-702724 STRING:Q12153 PaxDb:Q12153 EnsemblFungi:YDR312W
CYGD:YDR312w NextBio:969924 Genevestigator:Q12153
GermOnline:YDR312W Uniprot:Q12153
Length = 453
Score = 241 (89.9 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 61/156 (39%), Positives = 85/156 (54%)
Query: 32 IPKSFVFSRGKLP---GPLRQLEMDLRKLMLPHTAXXXXXXXXXXXXDFLNVAGPMGVTH 88
IPKS V G+ L QL D R++M PHTA DF+ + GP+GVTH
Sbjct: 22 IPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAVKLKERKSNKLKDFVVMCGPLGVTH 81
Query: 89 FLMLSKTESAPY--LRVARTPQGPTLTFKIHEYSLAVDVAQSQLRPRC-PQDLFKTSPLI 145
M +++E L++ARTPQGPT+TF++ +YSL D+ + RP+ D PL+
Sbjct: 82 LFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDIKKFLKRPKSLNNDDVLNPPLL 141
Query: 146 VLSGFGTG------DQHL---KLTTIMFQNIFPAID 172
VL+GF T DQ + K+ MFQNIFP ++
Sbjct: 142 VLNGFSTSKRSDEDDQDVNVEKVIVSMFQNIFPPLN 177
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 183 157 0.00079 106 3 11 22 0.44 31
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 547 (58 KB)
Total size of DFA: 122 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.95u 0.12s 13.07t Elapsed: 00:00:01
Total cpu time: 12.95u 0.12s 13.07t Elapsed: 00:00:01
Start: Fri May 10 06:35:28 2013 End: Fri May 10 06:35:29 2013